BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041741
         (748 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score = 1119 bits (2895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/746 (71%), Positives = 622/746 (83%), Gaps = 2/746 (0%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           KKAH+AGKL+HAH+LR+ L DDTFL NRLIE Y+KCN   +++ LFD+MP +DIY+WNAI
Sbjct: 18  KKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAI 77

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L A CK+ +LE A+ LF EMPERN+VSWN LISAL RNG E+KAL VY +MS EGFVPTH
Sbjct: 78  LGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTH 137

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            TLASV  A  AL+DVE GRRCHG+ IKIGLD NIYV NALL +YAKC     A+  F +
Sbjct: 138 FTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGD 197

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           + EPNEV+FTAMM GLA +D+V EA  +FRLM+R  + +DSVSLSSVLGVC+R GCG   
Sbjct: 198 VPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFG 257

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                S++  S +VHGQQVHCLTIK GFE+DLHL+NSLLDMYAKNG+MDSAE+IF N+PE
Sbjct: 258 --LHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPE 315

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
            SVVSWNVMIAGYGQK QS+KAIE LQRM+  GFEPDE+T +NMLVAC++SGDI+ GR+M
Sbjct: 316 VSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQM 375

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FD M SPS+SSWN +LS YSQ+ENHKEA+KLFREMQFR V PDRTTLAIILSS A M +L
Sbjct: 376 FDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLL 435

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
           E G+QVHA S K     D Y+ASGLIG+YSKC + E+A+R+F RI ELDIVCWNSM+AGL
Sbjct: 436 EGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGL 495

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           SLNSLD EAF FFK+MR+  M+P+QFS+ATVLS CAKLSS  QGRQVH+QI ++GY+ND 
Sbjct: 496 SLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDA 555

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           FVGSALI+MY KCGD+  AR  FDMM GKNTVTWNEMIHGYAQNG GDEAV LY+DMI S
Sbjct: 556 FVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGS 615

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G KPD ITFVA+LTACSHSGLVD G++IFNSMQ +HGVEP++DHYTC+ID LGRAG  HE
Sbjct: 616 GEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHE 675

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           AE+LID+MPCK DP+IWEVLLSSCR++A+V LA+RAAEELF LDP+NSAPY LLANIYSS
Sbjct: 676 AEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSS 735

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
           LGRWDD +AVRELMS N +VKDP YS
Sbjct: 736 LGRWDDAKAVRELMSYNQVVKDPGYS 761



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 170/374 (45%), Gaps = 49/374 (13%)

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
           T LA +L +C       +GK +HA  L++    D ++++ LI  Y+KC   + + R+F +
Sbjct: 6   TYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQ 65

Query: 465 IPELD-------------------------------IVCWNSMIAGLSLNSLDIEAFMFF 493
           +P+ D                               IV WN++I+ L+ N  + +A   +
Sbjct: 66  MPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVY 125

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
            +M +    PT F+ A+VLS+C  L     GR+ H    K G  N+I+VG+AL+ MY KC
Sbjct: 126 YRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKC 185

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
             I  A Q F  +   N V++  M+ G A +   +EA RL++ M+ + +  D ++  ++L
Sbjct: 186 RCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVL 245

Query: 614 TACSHSGLVDVGVEIFNS-------------MQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
             CS  G  + G+   N              + + HG E  L     ++D   + G+   
Sbjct: 246 GVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDS 305

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL-LANIYS 719
           AEM+   MP +   V W V+++    +     + +A E L R+      P  +   N+  
Sbjct: 306 AEMIFVNMP-EVSVVSWNVMIAG---YGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLV 361

Query: 720 SLGRWDDLRAVREL 733
           +  +  D+ A R++
Sbjct: 362 ACIKSGDIEAGRQM 375


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score = 1063 bits (2749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/746 (68%), Positives = 600/746 (80%), Gaps = 31/746 (4%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           KKAH+AGKL+HAH+LR+ L DDTFL NRLIE Y+KCN   +++ LFD+MP +DIY+WNAI
Sbjct: 18  KKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAI 77

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L A CK+ +LE A+ LF EMPERN+VSWN LISAL RNG                     
Sbjct: 78  LGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNG--------------------- 116

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
                   A  AL+DVE GRRCHG+ IKIGLD NIYV NALL +YAKC     A+  F +
Sbjct: 117 --------ACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGD 168

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           + EPNEV+FTAMM GLA +D+V EA  +FRLM+R  + +DSVSLSSVLGVC+R GCG   
Sbjct: 169 VPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFG 228

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                S++  S +VHGQQVHCLTIK GFE+DLHL+NSLLDMYAKNG+MDSAE+IF N+PE
Sbjct: 229 --LHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPE 286

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
            SVVSWNVMIAGYGQK QS+KAIE LQRM+  GFEPDE+T +NMLVAC++SGDI+ GR+M
Sbjct: 287 VSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQM 346

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FD M SPS+SSWN +LS YSQ+ENHKEA+KLFREMQFR V PDRTTLAIILSS A M +L
Sbjct: 347 FDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLL 406

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
           E G+QVHA S K     D Y+ASGLIG+YSKC + E+A+R+F RI ELDIVCWNSM+AGL
Sbjct: 407 EGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGL 466

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           SLNSLD EAF FFK+MR+  M+P+QFS+ATVLS CAKLSS  QGRQVH+QI ++GY+ND 
Sbjct: 467 SLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDA 526

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           FVGSALI+MY KCGD+  AR  FDMM GKNTVTWNEMIHGYAQNG GDEAV LY+DMI S
Sbjct: 527 FVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGS 586

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G KPD ITFVA+LTACSHSGLVD G++IFNSMQ +HGVEP++DHYTC+ID LGRAG  HE
Sbjct: 587 GEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHE 646

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           AE+LID+MPCK DP+IWEVLLSSCR++A+V LA+RAAEELF LDP+NSAPY LLANIYSS
Sbjct: 647 AEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSS 706

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
           LGRWDD +AVRELMS N +VKDP YS
Sbjct: 707 LGRWDDAKAVRELMSYNQVVKDPGYS 732



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 162/345 (46%), Gaps = 20/345 (5%)

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
           T LA +L +C       +GK +HA  L++    D ++++ LI  Y+KC   + + R+F +
Sbjct: 6   TYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQ 65

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM--YPTQFSFATVLSSCAKLSSSF 522
           +P+ DI  WN+++      S   +A + F +M +  +  + T  S  T   +C  L    
Sbjct: 66  MPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVE 125

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            GR+ H    K G  N+I+VG+AL+ MY KC  I  A Q F  +   N V++  M+ G A
Sbjct: 126 CGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLA 185

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS----------- 631
            +   +EA RL++ M+ + +  D ++  ++L  CS  G  + G+   N            
Sbjct: 186 DSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQV 245

Query: 632 --MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
             + + HG E  L     ++D   + G+   AEM+   MP +   V W V+++    +  
Sbjct: 246 HCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMP-EVSVVSWNVMIAG---YGQ 301

Query: 690 VRLAKRAAEELFRLDPKNSAPYSL-LANIYSSLGRWDDLRAVREL 733
              + +A E L R+      P  +   N+  +  +  D+ A R++
Sbjct: 302 KSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQM 346


>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Glycine max]
          Length = 770

 Score =  999 bits (2583), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/745 (63%), Positives = 595/745 (79%), Gaps = 6/745 (0%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KAH++GK++HA + R  LF DTFL N  IELYSKC++  SA H+FD +PHK+I+SWNAIL
Sbjct: 20  KAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNIFSWNAIL 79

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +A CK+ +L++A +LF +MP+RN VS N LIS +VR G E +AL  Y+ +  +G +P+HI
Sbjct: 80  AAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLDGVIPSHI 139

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T A+VF A  +LLD + GRR HG+VIK+GL+ NIYV NALL +YAKCG    A+ VF ++
Sbjct: 140 TFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDI 199

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            EPNEVTFT MM GLA+T+++ EA E+FRLM+RK + +DSVSLSS+LGVCA+     E D
Sbjct: 200 PEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKG----ERD 255

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           V     +  S N  G+Q+H L++KLGFE DLHL NSLLDMYAK GDMDSAE +F NL   
Sbjct: 256 V--GPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRH 313

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
           SVVSWN+MIAGYG +  S KA E LQRM+S G+EPD+VT INML ACV+SGD++TGR++F
Sbjct: 314 SVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQIF 373

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           D MP PS++SWNA+LS Y+Q+ +H+EA++LFR+MQF+   PDRTTLA+ILSSCA +G LE
Sbjct: 374 DCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLE 433

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           +GK+VHAAS K   + D YVAS LI +YSKC + EL++ VF ++PELD+VCWNSM+AG S
Sbjct: 434 AGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFS 493

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
           +NSL  +A  FFK+MRQ   +P++FSFATV+SSCAKLSS FQG+Q HAQI KDG+++DIF
Sbjct: 494 INSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIF 553

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           VGS+LIEMYCKCGD+ GAR FFD+M G+NTVTWNEMIHGYAQNG G  A+ LY DMI+SG
Sbjct: 554 VGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALCLYNDMISSG 613

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
            KPDDIT+VA+LTACSHS LVD G+EIFN+M   +GV P + HYTC+IDCL RAG F+E 
Sbjct: 614 EKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDCLSRAGRFNEV 673

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           E+++D MPCKDD V+WEV+LSSCR+HAN+ LAKRAAEEL+RLDP+NSA Y LLAN+YSSL
Sbjct: 674 EVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQNSASYVLLANMYSSL 733

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           G+WDD   VR+LMS N + KDP YS
Sbjct: 734 GKWDDAHVVRDLMSHNQVRKDPGYS 758



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 167/376 (44%), Gaps = 47/376 (12%)

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           K     LA ++  C       SGK VHA   + A   D ++++  I +YSKC     A  
Sbjct: 3   KSKSLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACH 62

Query: 461 VFHRIPELDIVCWNSMIAG----------------------LSLNSL---------DIEA 489
           VF  IP  +I  WN+++A                       +SLN+L         + +A
Sbjct: 63  VFDNIPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQA 122

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
              +  +  + + P+  +FATV S+C  L  +  GR+ H  + K G  ++I+V +AL+ M
Sbjct: 123 LDTYDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCM 182

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y KCG    A + F  +   N VT+  M+ G AQ     EA  L++ M+  G++ D ++ 
Sbjct: 183 YAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSL 242

Query: 610 VAILTACSHSGLVDVGV----------EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
            ++L  C+  G  DVG           +  +++ +  G E  L     ++D   + G   
Sbjct: 243 SSMLGVCA-KGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMD 301

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL-LANIY 718
            AE +   +  +   V W ++++    + N   +++AAE L R+      P  +   N+ 
Sbjct: 302 SAEKVFVNLN-RHSVVSWNIMIAG---YGNRCNSEKAAEYLQRMQSDGYEPDDVTYINML 357

Query: 719 SSLGRWDDLRAVRELM 734
           ++  +  D+R  R++ 
Sbjct: 358 TACVKSGDVRTGRQIF 373


>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 831

 Score =  989 bits (2558), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/746 (63%), Positives = 585/746 (78%), Gaps = 5/746 (0%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+  + K++HA I R  LF DTFLCN LI+LYSKCN   SA H+FDK+PHK+I+S+NAIL
Sbjct: 19  KSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKNIFSYNAIL 78

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN-KMSNEGFVPTH 120
           SA CKS++L++A +LF +MPERN VS N +I+ +V+NG E +AL  Y+  M  E   P+H
Sbjct: 79  SAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESVKPSH 138

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           IT A+VF A   L DV  GRR HGLV+K+G D NIYV+NALL +Y KCG  + A  VFE 
Sbjct: 139 ITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEG 198

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           + EPNEVTFT MM GL++T++V E LE+FRLM+RK + +DSVSLS++L +CA+   GV  
Sbjct: 199 IVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAK---GVSF 255

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
            V   S    S N  G+Q+H L +K GFE DLHL NSLLDMYAK GDMDSAE +F NL +
Sbjct: 256 GVCDDS-RGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDK 314

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
            SVVSWN+MI+GYG +  S KA+E  QRM+ CG+EPD+VT INML ACV+SGD+K GR++
Sbjct: 315 HSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQI 374

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FD M SPS+ SWNA+LS Y+QS +H EA++LFR+MQF+   PDRTTLAIILSSCA +G+L
Sbjct: 375 FDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLL 434

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
           E+GKQVHA S K   + D YVAS LI +YSKC + E+++ VF ++ ELD+VCWNSMIAG 
Sbjct: 435 EAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGF 494

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           S+NSL+ +A   FK+MRQ   +P++FSFAT+ SSCAKLSS FQG+Q+HAQI KDGYV+++
Sbjct: 495 SINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNV 554

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           FVGS+L+EMYCKCGD+  AR +FDMM GKN VTWNEMIHGYA NGYG EAV LYKDMI+S
Sbjct: 555 FVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISS 614

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G KPDDITFVA+LTACSHS LVD GVEIF+SM     V P LDHYTC+IDCLGR G F+E
Sbjct: 615 GEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNE 674

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
            E+++D MP KDD ++WEV+LSSCR+HANV LAKRAAEEL RL+P+NSAPY LLAN+YSS
Sbjct: 675 VEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSS 734

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
           +GRWDD + VR+LMS+N I KDP YS
Sbjct: 735 MGRWDDAQVVRDLMSDNQIHKDPGYS 760



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 140/317 (44%), Gaps = 46/317 (14%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L SC     L S K +HA   +     D ++ + LI +YSKC +   A  VF +IP  +
Sbjct: 11  LLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKN 70

Query: 470 IVCWNSMIAGL-SLNSLDIEAFMFFKQMRQN----------------------------- 499
           I  +N++++     N+L     +F +   +N                             
Sbjct: 71  IFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMV 130

Query: 500 --EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
              + P+  +FATV S+C  L     GR+ H  + K G+ ++I+V +AL+ MY KCG   
Sbjct: 131 YESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNE 190

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A + F+ +   N VT+  M+ G +Q     E + L++ M+  G+  D ++   IL  C+
Sbjct: 191 DAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICA 250

Query: 618 HS---GLVD---------VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
                G+ D          G +I +++ + HG E  L     ++D   + G    AE + 
Sbjct: 251 KGVSFGVCDDSRGLSTNAQGKQI-HTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVF 309

Query: 666 DEMPCKDDPVIWEVLLS 682
           + +  K   V W +++S
Sbjct: 310 ENLD-KHSVVSWNIMIS 325


>gi|334186756|ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20770
 gi|332658959|gb|AEE84359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 774

 Score =  872 bits (2254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/750 (54%), Positives = 560/750 (74%), Gaps = 12/750 (1%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++  ++GK++H  I+R G+  DT+LCNRL++LY +C +   A+ +FD+M  +D+YSWNA 
Sbjct: 19  ERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAF 78

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L+ +CK  DL  A ++FD MPER+VVSWNN+IS LVR G EEKAL VY +M  +GF+P+ 
Sbjct: 79  LTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSR 138

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW-TKHAVPVFE 179
            TLASV  A + +LD   G RCHG+ +K GLDKNI+V NALLS+YAKCG+   + V VFE
Sbjct: 139 FTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFE 198

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA-REGCGV 238
            +S+PNEV++TA++ GLA+ ++V+EA++MFRLM  K V +DSV LS++L + A REGC  
Sbjct: 199 SLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDS 258

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
            S+++         N  G+Q+HCL ++LGF  DLHL+NSLL++YAKN DM+ AE+IF+ +
Sbjct: 259 LSEIYG--------NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
           PE +VVSWN+MI G+GQ+Y+S K++E L RM+  GF+P+EVT I++L AC RSGD++TGR
Sbjct: 311 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR 370

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            +F S+P PSVS+WNAMLS YS  E+++EAI  FR+MQF+ +KPD+TTL++ILSSCA + 
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR-IPELDIVCWNSMI 477
            LE GKQ+H   ++T    ++++ SGLI +YS+C++ E++E +F   I ELDI CWNSMI
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMI 490

Query: 478 AGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
           +G   N LD +A + F++M Q   + P + SFATVLSSC++L S   GRQ H  + K GY
Sbjct: 491 SGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY 550

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
           V+D FV +AL +MYCKCG+I  ARQFFD +  KNTV WNEMIHGY  NG GDEAV LY+ 
Sbjct: 551 VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRK 610

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           MI+SG KPD ITFV++LTACSHSGLV+ G+EI +SMQ  HG+EP LDHY C++DCLGRAG
Sbjct: 611 MISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAG 670

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              +AE L +  P K   V+WE+LLSSCR+H +V LA+R AE+L RLDP++SA Y LL+N
Sbjct: 671 RLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSN 730

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            YSSL +WDD  A++ LM++N + K P  S
Sbjct: 731 TYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760


>gi|297799986|ref|XP_002867877.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313713|gb|EFH44136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 760

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/735 (55%), Positives = 553/735 (75%), Gaps = 12/735 (1%)

Query: 16  RNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYK 75
           R GL  DT+LCNRL++LY +  +   A+ LFD+M  +D+YSWNA L+ +CK  DLE A +
Sbjct: 20  RTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEEACE 79

Query: 76  LFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD 135
           +FD MPER+VVSWNN+IS LVR G EEKAL VY +M  +GF+P+  TLASV  A + + D
Sbjct: 80  VFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSKVQD 139

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW-TKHAVPVFEEMSEPNEVTFTAMMS 194
              G RCHG+ +K GLDKNI+V NALLS+YAKCG+   + V VFE +SEPNEV+FT ++S
Sbjct: 140 GVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVIS 199

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA-REGCGVESDVFAQSDNKFSRN 253
           GLA+ ++V+EA+ MFRLM  K V +D V LS++L +   REGC   S+++         N
Sbjct: 200 GLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYG--------N 251

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
           V G+Q+H L ++ GF  +LHL+NSLL++YAKN DM+ AE+IF+ +PE +VVSWN+MIAG+
Sbjct: 252 VLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGF 311

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
           GQ+Y+S K+IE L+RM+  GFEP+EVT I++L AC RSGD++TGR +F+++P PSVS+WN
Sbjct: 312 GQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRIFNTIPQPSVSAWN 371

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           AMLS YS  E+++EAI  FR+MQF+ +KPDRTTL++ILSSCA +  LE GKQ+H  +++T
Sbjct: 372 AMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRT 431

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHR-IPELDIVCWNSMIAGLSLNSLDIEAFMF 492
            +  D+++ SGLI +YS+C++ E+ E +F   I ELDI CWNSMI+GL  N+LD +A M 
Sbjct: 432 ETSEDSHIVSGLIAVYSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALML 491

Query: 493 FKQMRQNE-MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
           F++M Q   + P + ++A VL SC++L S   GRQ H Q+ K GYV+D FV +A+ +MYC
Sbjct: 492 FRRMHQTSVLLPNETTYAIVLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYC 551

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCG+I  ARQFFD +  KNTV WNEMIHGYA NG GDEAV LY++MI++G KPD ITFV+
Sbjct: 552 KCGEIESARQFFDTVSRKNTVIWNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITFVS 611

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +LTACSHSGLVD G+EI +SMQ DHG+EP LDHY C++DCLGRAG   +AE L +  P K
Sbjct: 612 VLTACSHSGLVDTGLEILSSMQRDHGIEPELDHYICIVDCLGRAGRLEDAETLAEATPYK 671

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
              V+WE+LLSSCR++ +V LA+R AE+L  LDP+NSA Y LL+N YSS+ +WDD  A++
Sbjct: 672 SSSVLWEILLSSCRVYGDVSLARRVAEKLMHLDPQNSAAYVLLSNTYSSVRQWDDAAALQ 731

Query: 732 ELMSENCIVKDPAYS 746
           ELM++N + K P +S
Sbjct: 732 ELMNKNRVHKTPGHS 746



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 226/466 (48%), Gaps = 61/466 (13%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN---- 58
            +V GK +H+  LR G   +  L N L+E+Y+K  + + A+ +F +MP  ++ SWN    
Sbjct: 250 GNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIA 309

Query: 59  -------------------------------AILSAQCKSDDLEFAYKLFDEMPERNVVS 87
                                          +IL A  +S D+E   ++F+ +P+ +V +
Sbjct: 310 GFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRIFNTIPQPSVSA 369

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           WN ++S        E+A++ + +M  +   P   TL+ +  +   L  +E G++ HG+ I
Sbjct: 370 WNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAI 429

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE-MSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +    ++ ++ + L+++Y++C   +    +F++ ++E +   + +M+SGL +     +AL
Sbjct: 430 RTETSEDSHIVSGLIAVYSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKAL 489

Query: 207 EMFRLMIRKAVSI-DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
            +FR M + +V + +  + + VLG C+R  C +               VHG+Q H   +K
Sbjct: 490 MLFRRMHQTSVLLPNETTYAIVLGSCSRL-CSL---------------VHGRQFHGQVVK 533

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
            G+ +D  +  ++ DMY K G+++SA   F  +  ++ V WN MI GY    +  +A++L
Sbjct: 534 SGYVSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNTVIWNEMIHGYAHNGRGDEAVDL 593

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYS 380
            + M S G +PD +T +++L AC  SG + TG E+  SM       P +  +  ++    
Sbjct: 594 YREMISAGEKPDGITFVSVLTACSHSGLVDTGLEILSSMQRDHGIEPELDHYICIVDCLG 653

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           ++   ++A  L     +   K       I+LSSC   G +   ++V
Sbjct: 654 RAGRLEDAETLAEATPY---KSSSVLWEILLSSCRVYGDVSLARRV 696



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 183/401 (45%), Gaps = 49/401 (12%)

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
           R +  G   D      +L   +  GD    R++FD M    V SWNA L+   +  + +E
Sbjct: 17  RDERTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEE 76

Query: 388 AIKLFREMQFR-------------------------------GVKPDRTTLAIILSSCAA 416
           A ++F  M  R                               G  P R TLA +LS+C+ 
Sbjct: 77  ACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSK 136

Query: 417 MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ-RNELAERVFHRIPELDIVCWNS 475
           +     G + H  ++KT    + +V + L+ +Y+KC    +   RVF  + E + V + +
Sbjct: 137 VQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTT 196

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS------SCAKLSSSFQ---GRQ 526
           +I+GL+  +  +EA   F+ M +  +       + +LS       C  LS  +    G+Q
Sbjct: 197 VISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQ 256

Query: 527 VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           +H+   + G+V ++ + ++L+E+Y K  D+ GA   F  M   N V+WN MI G+ Q   
Sbjct: 257 IHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYR 316

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
            D+++   K M  SG +P+++T ++IL AC  SG V+ G  IFN++      +P +  + 
Sbjct: 317 SDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRIFNTIP-----QPSVSAWN 371

Query: 647 CMIDCLGRAGHFHEAEMLIDEMP---CKDDPVIWEVLLSSC 684
            M+       H+ EA     +M     K D     V+LSSC
Sbjct: 372 AMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSC 412


>gi|255586231|ref|XP_002533770.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526307|gb|EEF28615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 617

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/603 (69%), Positives = 491/603 (81%), Gaps = 5/603 (0%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           KKAH++GKLLHA I R GL  DTFL NRLIE Y KC N   A +LF +MPHK+IYSWNAI
Sbjct: 19  KKAHLSGKLLHARIFRIGLSTDTFLLNRLIEFYFKCKNMGYAHNLFHQMPHKNIYSWNAI 78

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L+  CK+ +L+ A++LF EMPERN+VSWNNLISALVR  LE++AL VYN+M  EG +PTH
Sbjct: 79  LTEYCKAGNLQNAHRLFSEMPERNIVSWNNLISALVRGRLEQQALDVYNEMIWEGLMPTH 138

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            TLAS+  A   LL++E GR+CH L++KIGLD N+YV+NALLS+Y+KCG  + AV +FEE
Sbjct: 139 FTLASILSACGTLLNMESGRKCHTLIVKIGLDNNVYVSNALLSVYSKCGLVRDAVRLFEE 198

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M EPNEVT+TAMMSG  +TDRVVEALEMFRLM R+ + IDSVSLSSVLGVC + GCG ES
Sbjct: 199 MQEPNEVTYTAMMSGFTQTDRVVEALEMFRLMCRQGICIDSVSLSSVLGVCTKGGCG-ES 257

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           D   QSD    RN  G+  H L IKLGFE+DLHL NSLLDMYAK+GDMDSAE +F+NLPE
Sbjct: 258 D---QSDGSL-RNALGKLAHGLAIKLGFESDLHLCNSLLDMYAKDGDMDSAEEVFANLPE 313

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
            SVVSWNVMIAGYGQK +S KAIE LQRM+SCGFEPDEVT INML ACVRSGDI+ GR++
Sbjct: 314 MSVVSWNVMIAGYGQKCKSGKAIEYLQRMQSCGFEPDEVTYINMLTACVRSGDIEIGRQI 373

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FD M  P VSSWN MLS Y Q ENH EAIKLFREMQF+ VKPDRTTLAIILSSCA M +L
Sbjct: 374 FDCMACPGVSSWNGMLSGYFQIENHNEAIKLFREMQFQNVKPDRTTLAIILSSCAGMELL 433

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
           E+GKQVHA S K A H D YVASGLIG+YSKC + ++A+ +F +I + D VCWNSMIAGL
Sbjct: 434 EAGKQVHAISQKAAFHEDIYVASGLIGMYSKCGKMDIADCIFKKISKQDTVCWNSMIAGL 493

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           SLNSLD EA  FF+QMRQ+ M PTQFS+AT+LS CAKLSS   G+Q+HAQI K+G+VND+
Sbjct: 494 SLNSLDNEALAFFQQMRQSGMSPTQFSYATILSCCAKLSSLIHGKQIHAQIAKEGFVNDV 553

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           +VGSAL++MYCKCG++  ARQFFD+M  KNTVTWNEMIHGYAQNG+G EAV LY+DMI S
Sbjct: 554 YVGSALVDMYCKCGEVGEARQFFDIMSSKNTVTWNEMIHGYAQNGHGHEAVCLYRDMIES 613

Query: 601 GVK 603
            ++
Sbjct: 614 AIQ 616



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/575 (25%), Positives = 256/575 (44%), Gaps = 99/575 (17%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KNIY  NA+L+ Y K G  ++A  +F EM E N V++  ++S L +     +AL+++  M
Sbjct: 70  KNIYSWNAILTEYCKAGNLQNAHRLFSEMPERNIVSWNNLISALVRGRLEQQALDVYNEM 129

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
           I + +     +L+S+L  C      +ES               G++ H L +K+G + ++
Sbjct: 130 IWEGLMPTHFTLASILSACGTL-LNMES---------------GRKCHTLIVKIGLDNNV 173

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
           ++SN+LL +Y+K G +  A  +F  + E + V++  M++G+ Q  +  +A+E+ + M   
Sbjct: 174 YVSNALLSVYSKCGLVRDAVRLFEEMQEPNEVTYTAMMSGFTQTDRVVEALEMFRLMCRQ 233

Query: 333 GFEPDEVTSINMLVACVRSG---------------------------------------- 352
           G   D V+  ++L  C + G                                        
Sbjct: 234 GICIDSVSLSSVLGVCTKGGCGESDQSDGSLRNALGKLAHGLAIKLGFESDLHLCNSLLD 293

Query: 353 ------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
                 D+ +  E+F ++P  SV SWN M++ Y Q     +AI+  + MQ  G +PD  T
Sbjct: 294 MYAKDGDMDSAEEVFANLPEMSVVSWNVMIAGYGQKCKSGKAIEYLQRMQSCGFEPDEVT 353

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
              +L++C   G +E G+Q+           D     G                      
Sbjct: 354 YINMLTACVRSGDIEIGRQI----------FDCMACPG---------------------- 381

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
              +  WN M++G        EA   F++M+   + P + + A +LSSCA +     G+Q
Sbjct: 382 ---VSSWNGMLSGYFQIENHNEAIKLFREMQFQNVKPDRTTLAIILSSCAGMELLEAGKQ 438

Query: 527 VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           VHA  +K  +  DI+V S LI MY KCG +  A   F  +  ++TV WN MI G + N  
Sbjct: 439 VHAISQKAAFHEDIYVASGLIGMYSKCGKMDIADCIFKKISKQDTVCWNSMIAGLSLNSL 498

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
            +EA+  ++ M  SG+ P   ++  IL+ C+    +  G +I   +  +  V  +    +
Sbjct: 499 DNEALAFFQQMRQSGMSPTQFSYATILSCCAKLSSLIHGKQIHAQIAKEGFVNDVYVG-S 557

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            ++D   + G   EA    D M  K + V W  ++
Sbjct: 558 ALVDMYCKCGEVGEARQFFDIMSSK-NTVTWNEMI 591



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 163/369 (44%), Gaps = 46/369 (12%)

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
           LA +L SC       SGK +HA   +     D ++ + LI  Y KC+    A  +FH++P
Sbjct: 9   LANLLQSCIDKKAHLSGKLLHARIFRIGLSTDTFLLNRLIEFYFKCKNMGYAHNLFHQMP 68

Query: 467 -------------------------------ELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
                                          E +IV WN++I+ L    L+ +A   + +
Sbjct: 69  HKNIYSWNAILTEYCKAGNLQNAHRLFSEMPERNIVSWNNLISALVRGRLEQQALDVYNE 128

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M    + PT F+ A++LS+C  L +   GR+ H  I K G  N+++V +AL+ +Y KCG 
Sbjct: 129 MIWEGLMPTHFTLASILSACGTLLNMESGRKCHTLIVKIGLDNNVYVSNALLSVYSKCGL 188

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  A + F+ M   N VT+  M+ G+ Q     EA+ +++ M   G+  D ++  ++L  
Sbjct: 189 VRDAVRLFEEMQEPNEVTYTAMMSGFTQTDRVVEALEMFRLMCRQGICIDSVSLSSVLGV 248

Query: 616 CSHSG----------LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
           C+  G          L +   ++ + + +  G E  L     ++D   + G    AE + 
Sbjct: 249 CTKGGCGESDQSDGSLRNALGKLAHGLAIKLGFESDLHLCNSLLDMYAKDGDMDSAEEVF 308

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL-LANIYSSLGRW 724
             +P +   V W V+++    +     + +A E L R+      P  +   N+ ++  R 
Sbjct: 309 ANLP-EMSVVSWNVMIAG---YGQKCKSGKAIEYLQRMQSCGFEPDEVTYINMLTACVRS 364

Query: 725 DDLRAVREL 733
            D+   R++
Sbjct: 365 GDIEIGRQI 373


>gi|5262217|emb|CAB45843.1| putative protein [Arabidopsis thaliana]
 gi|7268873|emb|CAB79077.1| putative protein [Arabidopsis thaliana]
          Length = 740

 Score =  859 bits (2219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/733 (55%), Positives = 548/733 (74%), Gaps = 12/733 (1%)

Query: 18  GLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLF 77
           G+  DT+LCNRL++LY +C +   A+ +FD+M  +D+YSWNA L+ +CK  DL  A ++F
Sbjct: 2   GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVF 61

Query: 78  DEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVE 137
           D MPER+VVSWNN+IS LVR G EEKAL VY +M  +GF+P+  TLASV  A + +LD  
Sbjct: 62  DGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGV 121

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW-TKHAVPVFEEMSEPNEVTFTAMMSGL 196
            G RCHG+ +K GLDKNI+V NALLS+YAKCG+   + V VFE +S+PNEV++TA++ GL
Sbjct: 122 FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGL 181

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA-REGCGVESDVFAQSDNKFSRNVH 255
           A+ ++V+EA++MFRLM  K V +DSV LS++L + A REGC   S+++         N  
Sbjct: 182 ARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG--------NEL 233

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+Q+HCL ++LGF  DLHL+NSLL++YAKN DM+ AE+IF+ +PE +VVSWN+MI G+GQ
Sbjct: 234 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 293

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
           +Y+S K++E L RM+  GF+P+EVT I++L AC RSGD++TGR +F S+P PSVS+WNAM
Sbjct: 294 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAM 353

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           LS YS  E+++EAI  FR+MQF+ +KPD+TTL++ILSSCA +  LE GKQ+H   ++T  
Sbjct: 354 LSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEI 413

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHR-IPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             ++++ SGLI +YS+C++ E++E +F   I ELDI CWNSMI+G   N LD +A + F+
Sbjct: 414 SKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFR 473

Query: 495 QMRQNEMY-PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
           +M Q  +  P + SFATVLSSC++L S   GRQ H  + K GYV+D FV +AL +MYCKC
Sbjct: 474 RMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKC 533

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G+I  ARQFFD +  KNTV WNEMIHGY  NG GDEAV LY+ MI+SG KPD ITFV++L
Sbjct: 534 GEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVL 593

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
           TACSHSGLV+ G+EI +SMQ  HG+EP LDHY C++DCLGRAG   +AE L +  P K  
Sbjct: 594 TACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSS 653

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
            V+WE+LLSSCR+H +V LA+R AE+L RLDP++SA Y LL+N YSSL +WDD  A++ L
Sbjct: 654 SVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGL 713

Query: 734 MSENCIVKDPAYS 746
           M++N + K P  S
Sbjct: 714 MNKNRVHKTPGQS 726



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 224/462 (48%), Gaps = 61/462 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN-------- 58
           GK +H   LR G   D  L N L+E+Y+K  + + A+ +F +MP  ++ SWN        
Sbjct: 234 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 293

Query: 59  ---------------------------AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
                                      ++L A  +S D+E   ++F  +P+ +V +WN +
Sbjct: 294 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAM 353

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           +S        E+A+S + +M  +   P   TL+ +  +   L  +E G++ HG+VI+  +
Sbjct: 354 LSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEI 413

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEE-MSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
            KN ++ + L+++Y++C   + +  +F++ ++E +   + +M+SG        +AL +FR
Sbjct: 414 SKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFR 473

Query: 211 LMIRKAV-SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
            M + AV   +  S ++VL  C+R                    +HG+Q H L +K G+ 
Sbjct: 474 RMHQTAVLCPNETSFATVLSSCSR----------------LCSLLHGRQFHGLVVKSGYV 517

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           +D  +  +L DMY K G++DSA   F  +  ++ V WN MI GYG   +  +A+ L ++M
Sbjct: 518 SDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM 577

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSEN 384
            S G +PD +T +++L AC  SG ++TG E+  SM       P +  +  ++    ++  
Sbjct: 578 ISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGR 637

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
            ++A KL     +   K       I+LSSC   G +   ++V
Sbjct: 638 LEDAEKLAEATPY---KSSSVLWEILLSSCRVHGDVSLARRV 676



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 138/601 (22%), Positives = 258/601 (42%), Gaps = 111/601 (18%)

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
           +G+  + Y+ N LL LY +CG   +A  VF+EMS  +  ++ A ++   K   + EA E+
Sbjct: 1   MGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEV 60

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGCGVES---------DVFAQSD----------NK 249
           F  M  +    D VS ++++ V  R+G   ++         D F  S           +K
Sbjct: 61  FDGMPER----DVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSK 116

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM-DSAEVIFSNLPERSVVSWNV 308
               V G + H + +K G + ++ + N+LL MYAK G + D    +F +L + + VS+  
Sbjct: 117 VLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTA 176

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML-VACVRSG--------------- 352
           +I G  ++ +  +A+++ + M   G + D V   N+L ++  R G               
Sbjct: 177 VIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQ 236

Query: 353 ----------------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                       D+     +F  MP  +V SWN M+  + Q   
Sbjct: 237 IHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYR 296

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
             ++++    M+  G +P+  T   +L +C   G +E+G+                    
Sbjct: 297 SDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR-------------------- 336

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
                          R+F  IP+  +  WN+M++G S      EA   F+QM+   + P 
Sbjct: 337 ---------------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPD 381

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF- 563
           + + + +LSSCA+L     G+Q+H  + +     +  + S LI +Y +C  +  +   F 
Sbjct: 382 KTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFD 441

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK-PDDITFVAILTACSHSGLV 622
           D ++  +   WN MI G+  N    +A+ L++ M  + V  P++ +F  +L++CS    +
Sbjct: 442 DCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSL 501

Query: 623 DVGVEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
             G + F+ + +  G   + D +  T + D   + G    A    D +  + + VIW  +
Sbjct: 502 LHGRQ-FHGLVVKSGY--VSDSFVETALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNEM 557

Query: 681 L 681
           +
Sbjct: 558 I 558


>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Brachypodium distachyon]
          Length = 805

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/733 (52%), Positives = 516/733 (70%), Gaps = 8/733 (1%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           +L  GL  DTFL NRL+ELYS       A   F  +P  + YS+NA LSA  ++ DL+ A
Sbjct: 34  VLAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAA 93

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
             L DEMP+RNVVSWN +I+AL R+    +AL +Y  M  EG VPTH TLASV  A  A+
Sbjct: 94  RALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAV 153

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
             ++ GRRCHGL +K+GLD+N++V NALL +Y KCG  + AV +F+ M+ PNEV+FTAMM
Sbjct: 154 AALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMM 213

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            GL +   V +AL +F  M R  V +D V++SSVLG CA + C  E DV       F   
Sbjct: 214 GGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCA-QACASEFDVV----RAFRL- 267

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             GQ +H L ++ GF +D H+ NSL+DMY K   MD A  +F +LP  S VSWN++I G+
Sbjct: 268 --GQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGF 325

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
           GQ     KA+E+L  M+  G EP+EVT  NML +C+++ D+ + R MFD +  PSV++WN
Sbjct: 326 GQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWN 385

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
            +LS Y Q E H++ ++LFR MQ + V+PDRTTLA+ILSSC+ +GIL+ G QVH+AS++ 
Sbjct: 386 TLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRF 445

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
             H D +VASGL+ +YSKC +  +A  +F+R+ E D+VCWNSMI+GL+++SL+ EAF FF
Sbjct: 446 LLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFF 505

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
           KQMR N M PT+ S+A++++SCA+LSS  QGRQ+HAQI KDGY  +++VGSALI+MY KC
Sbjct: 506 KQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKC 565

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G++  AR FFD M  KN V WNEMIHGYAQNG+G++AV L++ M+ +  +PD +TF+A+L
Sbjct: 566 GNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVL 625

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
           T CSHSGLVD  +  FNSM+  +G+ P+ +HYTC+ID LGRAG   E E LID MPCKDD
Sbjct: 626 TGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDD 685

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
           P++WEVLL++C +H N  L + AA+ LFRLDPKN +PY LL+NIY+SLGR  D   VR L
Sbjct: 686 PIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGVRAL 745

Query: 734 MSENCIVKDPAYS 746
           MS   +VK   YS
Sbjct: 746 MSSRGVVKGRGYS 758


>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
          Length = 803

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/727 (52%), Positives = 514/727 (70%), Gaps = 11/727 (1%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           DTFL NRL+ELYS+      A   F  +P  + YS+NA LSA C++ DL+ A  L   MP
Sbjct: 42  DTFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMP 101

Query: 82  ERNVVSWNNLISALVRN-GLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
            RN VSWN +ISAL R+ G   +A+ +Y +M  EG +PTH TLASV  A   L  +  GR
Sbjct: 102 RRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGR 161

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           RCHG+ +K+GLD N +V NALL +Y KCG    AV +F  M+ PNEV+FTAMM GLA+T 
Sbjct: 162 RCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTG 221

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQV 259
            + +AL +F  M R  V +D VS+SSVLG CA + C         +D   +R    GQ +
Sbjct: 222 SIDDALRLFARMCRSGVPVDPVSVSSVLGACA-QACA--------TDYSVARAFRLGQAI 272

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H L ++ GF +D H+ NSL+DMY K  +MD A  +F +LP  ++VSWN++I G+GQ+   
Sbjct: 273 HALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSC 332

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
            KA+E+L  M+  GFEP+EVT  N+L +C+++ D+ + R MFD +  PSV++WN +LS Y
Sbjct: 333 AKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGY 392

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
            Q E H++ I+LFR MQ + V+PDRTTLA+ILSSC+ +GIL+ G+QVH+AS++   H D 
Sbjct: 393 CQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDM 452

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           +VASGL+ +YSKC +  +A  +F+++ E D+VCWNS+I+GL+++SL+ EAF FFKQMR+N
Sbjct: 453 FVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMREN 512

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
            + PT+ S+A++++SC++LSS   GRQ+HAQ+ KDGY  +++VGSALI+MY KCG++  A
Sbjct: 513 GIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDA 572

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           R FFD M  KN V WNEMIHGYAQNG GD+AV L++ M+ +  KPD +TF+A+LT CSHS
Sbjct: 573 RLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHS 632

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           GLVD  +  FNSM+  +G+ P+ +HYTC+ID LGRAG F E E LI +MPCKDDP+IWEV
Sbjct: 633 GLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEV 692

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL++C +H N  L K AAE LFR+DPKN +PY LL+NIY+SLGR  D  AVR LMS   +
Sbjct: 693 LLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGV 752

Query: 740 VKDPAYS 746
           VK   YS
Sbjct: 753 VKGRGYS 759


>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
 gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
          Length = 807

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/734 (51%), Positives = 519/734 (70%), Gaps = 10/734 (1%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           +L  GL  DTFL NRL+ELYS       A   F  +P  ++YS+NA +SA C++ DL  A
Sbjct: 36  VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
             L   MP+RN VSWN +I+A+ R+    +AL +Y  M  EG  PT+ TLASV  A  A+
Sbjct: 96  RDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAV 155

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
             ++ GRRCHGL +K+GLD N +V N LL +Y KCG    AV +F+ MS PNEV+FTAMM
Sbjct: 156 AALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMM 215

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            GLA++  V +AL +F  M R A+ +D V++SSVLG CA+   G         D   +R 
Sbjct: 216 GGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAG---------DYNVARA 266

Query: 254 VH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
           +   Q +H L ++ GF++D H+ NSL+DMYAK   MD A  +F ++   S+VSWN+++ G
Sbjct: 267 IRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTG 326

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSW 372
           YGQ     +A+E+L  M+  GFEP+EVT  NML +C+++ D+ + R MFD +  PSV++W
Sbjct: 327 YGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTW 386

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           N +LS Y Q E H++ I+LFR MQ + V+PDRTTLA+ILS+C+ +GILE GKQVH+AS+K
Sbjct: 387 NTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVK 446

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
              H D +VASGLI +YSKC +  +A+ +F+ + E D+VCWNSMI+GL+++SL+ EAF F
Sbjct: 447 LLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDF 506

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           FKQMR+N M+PT+ S+A++++SCA+LSS  QGRQ+HAQ+ KDGY  +++VGS+LI+MY K
Sbjct: 507 FKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAK 566

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           CG++  AR FF+ M  KN V WNEMIHGYAQNG+G++AV L++ M+ +  KPD +TF+A+
Sbjct: 567 CGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAV 626

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           LT CSHSGLVD  +  FNSM+ ++G+ P+++HYTC+ID LGRAG F E   +ID+MP KD
Sbjct: 627 LTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKD 686

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
           D ++WEVLL++C +H N  L + AA+ LFRLDPKN +PY LL+NIY++LGR  D  AVR 
Sbjct: 687 DAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRA 746

Query: 733 LMSENCIVKDPAYS 746
           LMS   +VK   YS
Sbjct: 747 LMSSRGVVKGRGYS 760


>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
          Length = 807

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/747 (50%), Positives = 514/747 (68%), Gaps = 10/747 (1%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           K +    K  HA +L  GL  DTFL NRL+ELYS       A   F  +PH ++YS+NA 
Sbjct: 23  KPSRSNAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAA 82

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +SA C++ DL  A  L   MP+RN VSWN +I+A+ R+G   +AL +Y  M  EG  PT+
Sbjct: 83  ISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTN 142

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            TLASV  A  A+  ++ GRRCHGL +K+GLD + +V N LL +Y KCG    AV +F+ 
Sbjct: 143 FTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDG 202

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M  PNEV+FTAMM GLA+   V +AL +F  M R  + +D V++SSVLG CA+   G   
Sbjct: 203 MPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAG--- 259

Query: 241 DVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                 D   +R +   Q +H L ++ GF +D H+ NSL+D+YAK   MD A  +F +L 
Sbjct: 260 ------DYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLS 313

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
             S+VSWN++I GYGQ     +A+E+L+ M+  GFEP+EVT  NML +C+++ D+ + R 
Sbjct: 314 SVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARA 373

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           MFD +P PSV++WN +LS Y Q E H+E I LFR MQ + V+PDRTTLA+ILSSC+ +G 
Sbjct: 374 MFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGN 433

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
            E GKQVH+AS++   H D +VASGLI IYSKC +  +A  +F+ + E D+VCWNSMI+G
Sbjct: 434 FELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISG 493

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
           L+++SL  EAF F KQMR+N M+PT+ S+A++++ CA+LSS  QGRQ+HAQ+ KDGY  +
Sbjct: 494 LAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQN 553

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           ++VG +LI+MY K G++  AR FF+ M  KN V WNEMIHGYAQNG+G++AV L++ M+ 
Sbjct: 554 VYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLT 613

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
           +  KPD +TF+A+LT CSHSGLVD  V  FNSM+ ++G+ P+++HYTC+ID L RA  F 
Sbjct: 614 TKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFA 673

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           E E +I +MP KDDP++WEVLL++C +H N  L + +A+ LFRLDPKN +PY LL+NIY+
Sbjct: 674 EVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYA 733

Query: 720 SLGRWDDLRAVRELMSENCIVKDPAYS 746
           +LGR  D  AVR LMS   +VK   YS
Sbjct: 734 TLGRHGDASAVRALMSSRGVVKGRGYS 760


>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
 gi|194688792|gb|ACF78480.1| unknown [Zea mays]
          Length = 706

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/668 (51%), Positives = 471/668 (70%), Gaps = 10/668 (1%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           MP+RN VSWN +I+A+ R+G   +AL +Y  M  EG  PT+ TLASV  A  A+  ++ G
Sbjct: 1   MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           RRCHGL +K+GLD + +V N LL +Y KCG    AV +F+ M  PNEV+FTAMM GLA+ 
Sbjct: 61  RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQG 120

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQ 258
             V +AL +F  M R  + +D V++SSVLG CA+   G         D   +R +   Q 
Sbjct: 121 GAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAG---------DYNVARAIQLAQS 171

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +H L ++ GF +D H+ NSL+D+YAK   MD A  +F +L   S+VSWN++I GYGQ   
Sbjct: 172 IHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGC 231

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
             +A+E+L+ M+  GFEP+EVT  NML +C+++ D+ + R MFD +P PSV++WN +LS 
Sbjct: 232 YERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSG 291

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           Y Q E H+E I LFR MQ + V+PDRTTLA+ILSSC+ +G  E GKQVH+AS++   H D
Sbjct: 292 YGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHND 351

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
            +VASGLI IYSKC +  +A  +F+ + E D+VCWNSMI+GL+++SL  EAF F KQMR+
Sbjct: 352 MFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRE 411

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
           N M+PT+ S+A++++ CA+LSS  QGRQ+HAQ+ KDGY  +++VG +LI+MY K G++  
Sbjct: 412 NGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDD 471

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           AR FF+ M  KN V WNEMIHGYAQNG+G++AV L++ M+ +  KPD +TF+A+LT CSH
Sbjct: 472 ARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSH 531

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
           SGLVD  V  FNSM+ ++G+ P+++HYTC+ID L RA  F E E +I +MP KDDP++WE
Sbjct: 532 SGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWE 591

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC 738
           VLL++C +H N  L + +A+ LFRLDPKN +PY LL+NIY++LGR  D  AVR LMS   
Sbjct: 592 VLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRG 651

Query: 739 IVKDPAYS 746
           +VK   YS
Sbjct: 652 VVKGRGYS 659



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 218/445 (48%), Gaps = 59/445 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS------- 62
           +HA ++R G   D  + N L++LY+K      A  +F+ +    I SWN +++       
Sbjct: 172 IHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGC 231

Query: 63  ---------------------------AQC-KSDDLEFAYKLFDEMPERNVVSWNNLISA 94
                                      A C K+ D+  A  +FD++P+ +V +WN L+S 
Sbjct: 232 YERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSG 291

Query: 95  LVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKN 154
             +  L ++ + ++ +M ++   P   TLA +  + + L + E G++ H   +++ L  +
Sbjct: 292 YGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHND 351

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
           ++VA+ L+ +Y+KCG    A+ +F  M+E + V + +M+SGLA      EA +  + M  
Sbjct: 352 MFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRE 411

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
             +     S +S++ +CAR                 S    G+Q+H   +K G++ ++++
Sbjct: 412 NGMFPTESSYASMINLCAR----------------LSSIPQGRQMHAQVLKDGYDQNVYV 455

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
             SL+DMYAK+G+MD A + F+ +  +++V+WN MI GY Q     KA+EL + M +   
Sbjct: 456 GCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQ 515

Query: 335 EPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAI 389
           +PD VT I +L  C  SG +      F+SM S     P V  +  ++ + +++    E  
Sbjct: 516 KPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVE 575

Query: 390 KLFREMQFRGVKPDRTTLAIILSSC 414
            +  +M +   K D     ++L++C
Sbjct: 576 AVIGKMPY---KDDPILWEVLLAAC 597



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 132/577 (22%), Positives = 230/577 (39%), Gaps = 146/577 (25%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  H   ++ GL    F+ N L+ +Y+KC +   A  LFD MP  +  S+ A++    +
Sbjct: 60  GRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQ 119

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              ++ A +LF  M  R  +  + +  + V     +     YN       V   I LA  
Sbjct: 120 GGAVDDALRLFARM-SRTGIRVDPVAVSSVLGACAQACAGDYN-------VARAIQLA-- 169

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS---- 182
                        +  H LV++ G   + +V N+L+ LYAK      A+ VFE +S    
Sbjct: 170 -------------QSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSI 216

Query: 183 -------------------------------EPNEVTFTAM------------------- 192
                                          EPNEVT++ M                   
Sbjct: 217 VSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDK 276

Query: 193 ------------MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
                       +SG  + +   E +++FR M  + V  D  +L+ +L  C+R G     
Sbjct: 277 IPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLG----- 331

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                    F     G+QVH  +++L    D+ +++ L+D+Y+K G +  A +IF+ + E
Sbjct: 332 --------NFEL---GKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTE 380

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           R VV WN MI+G      S +A + L++M+  G  P E +  +M+  C R   I  GR+M
Sbjct: 381 RDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQM 440

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              F+ M   ++ +WN M+  Y+Q+   
Sbjct: 441 HAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFG 500

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH---AASLKTASHIDNYVA 442
           ++A++LF  M     KPD  T   +L+ C+  G+++          ++      +++Y  
Sbjct: 501 EKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTC 560

Query: 443 SGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
             LI   ++  R    E V  ++P + D + W  ++A
Sbjct: 561 --LIDALARAARFAEVEAVIGKMPYKDDPILWEVLLA 595


>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
 gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
          Length = 526

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 264/482 (54%), Positives = 364/482 (75%)

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           + GF +D H+ NSL+DMY K  +MD A  +F +LP  ++VSWN++I G+GQ+    KA+E
Sbjct: 1   RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
           +L  M+  GFEP+EVT  N+L +C+++ D+ + R MFD +  PSV++WN +LS Y Q E 
Sbjct: 61  VLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQ 120

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
           H++ I+LFR MQ + V+PDRTTLA+ILSSC+ +GIL+ G+QVH+AS++   H D +VASG
Sbjct: 121 HQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASG 180

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           L+ +YSKC +  +A  +F+++ E D+VCWNS+I+GL+++SL+ EAF FFKQMR+N + PT
Sbjct: 181 LVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPT 240

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           + S+A++++SC++LSS   GRQ+HAQ+ KDGY  +++VGSALI+MY KCG++  AR FFD
Sbjct: 241 ESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFD 300

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            M  KN V WNEMIHGYAQNG GD+AV L++ M+ +  KPD +TF+A+LT CSHSGLVD 
Sbjct: 301 TMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDK 360

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
            +  FNSM+  +G+ P+ +HYTC+ID LGRAG F E E LI +MPCKDDP+IWEVLL++C
Sbjct: 361 AMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAAC 420

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
            +H N  L K AAE LFR+DPKN +PY LL+NIY+SLGR  D  AVR LMS   +VK   
Sbjct: 421 VVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRG 480

Query: 745 YS 746
           YS
Sbjct: 481 YS 482



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 209/449 (46%), Gaps = 59/449 (13%)

Query: 16  RNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS------------- 62
           R G   D  + N LI++Y+KC     A  +F+ +P   I SWN +++             
Sbjct: 1   RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60

Query: 63  ---------------------AQC-KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGL 100
                                A C K+ D+  A  +FD++   +V +WN L+S   +   
Sbjct: 61  VLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQ 120

Query: 101 EEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANA 160
            +  + ++ +M ++   P   TLA +  + + L  ++ GR+ H   ++  L  +++VA+ 
Sbjct: 121 HQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASG 180

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           L+ +Y+KCG    A  +F +M+E + V + +++SGL       EA + F+ M    +   
Sbjct: 181 LVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPT 240

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
             S +S++  C+R                 S   HG+Q+H   +K G++ ++++ ++L+D
Sbjct: 241 ESSYASMINSCSR----------------LSSIPHGRQIHAQVMKDGYDQNVYVGSALID 284

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MYAK G+MD A + F  +  +++V+WN MI GY Q     KA+EL + M +   +PD VT
Sbjct: 285 MYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVT 344

Query: 341 SINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREM 395
            I +L  C  SG +      F+SM +     P    +  ++ +  ++    E   L  +M
Sbjct: 345 FIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKM 404

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGK 424
                K D     ++L++C      E GK
Sbjct: 405 P---CKDDPIIWEVLLAACVVHHNAELGK 430



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/465 (22%), Positives = 199/465 (42%), Gaps = 92/465 (19%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D +  N+++    K  +++ A K+F+ +P   +VSWN LI+   + G   KA+ V + M 
Sbjct: 7   DQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQ 66

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             GF P  +T +++  +     DV   R                                
Sbjct: 67  EAGFEPNEVTYSNLLASCIKARDVHSAR-------------------------------- 94

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
               +F+++S P+  T+  ++SG  + ++  + +E+FR M  + V  D  +L+ +L  C+
Sbjct: 95  ---AMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCS 151

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
           + G                    G+QVH  +++     D+ +++ L+DMY+K G +  A 
Sbjct: 152 KLGI----------------LDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIAR 195

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            IF+ + ER VV WN +I+G      + +A +  ++M+  G  P E +  +M+ +C R  
Sbjct: 196 SIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLS 255

Query: 353 DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
            I  GR++                                   FD+M   ++ +WN M+ 
Sbjct: 256 SIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIH 315

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y+Q+    +A++LF  M     KPD  T   +L+ C+  G+++       +   +   I
Sbjct: 316 GYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGII 375

Query: 438 ---DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
              ++Y    LI    +  R    E + H++P + D + W  ++A
Sbjct: 376 PLAEHYTC--LIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLA 418



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 68/117 (58%), Gaps = 5/117 (4%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA ++++G   + ++ + LI++Y+KC N   A+  FD M  K+I +WN ++    +
Sbjct: 260 GRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQ 319

Query: 67  SDDLEFAYKLFDEM----PERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVP 118
           +   + A +LF+ M     + + V++  +++    +GL +KA++ +N M N  G +P
Sbjct: 320 NGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIP 376


>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
          Length = 518

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 256/466 (54%), Positives = 352/466 (75%)

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MY K  +MD A  +F +LP  ++VSWN++I G+GQ+    KA+E+L  M+  GFEP+EVT
Sbjct: 1   MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60

Query: 341 SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
             N+L +C+++ D+ + R MFD +  PSV++WN +LS Y Q E H++ I+LFR MQ + V
Sbjct: 61  YSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNV 120

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           +PDRTTLA+ILSSC+ +GIL+ G+QVH+AS++   H D +VASGL+ +YSKC +  +A  
Sbjct: 121 QPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARS 180

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           +F+++ E D+VCWNS+I+GL+++SL+ EAF FFKQMR+N + PT+ S+A++++SC++LSS
Sbjct: 181 IFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSS 240

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              GRQ+HAQ+ KDGY  +++VGSALI+MY KCG++  AR FFD M  KN V WNEMIHG
Sbjct: 241 IPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHG 300

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           YAQNG GD+AV L++ M+ +  KPD +TF+A+LT CSHSGLVD  +  FNSM+  +G+ P
Sbjct: 301 YAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIP 360

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
           + +HYTC+ID LGRAG F E E LI +MPCKDDP+IWEVLL++C +H N  L K AAE L
Sbjct: 361 LAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHL 420

Query: 701 FRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           FR+DPKN +PY LL+NIY+SLGR  D  AVR LMS   +VK   YS
Sbjct: 421 FRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYS 466



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 201/433 (46%), Gaps = 59/433 (13%)

Query: 32  LYSKCNNTHSAQHLFDKMPHKDIYSWNAILS----------------------------- 62
           +Y+KC     A  +F+ +P   I SWN +++                             
Sbjct: 1   MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60

Query: 63  -----AQC-KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
                A C K+ D+  A  +FD++   +V +WN L+S   +    +  + ++ +M ++  
Sbjct: 61  YSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNV 120

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
            P   TLA +  + + L  ++ GR+ H   ++  L  +++VA+ L+ +Y+KCG    A  
Sbjct: 121 QPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARS 180

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F +M+E + V + +++SGL       EA + F+ M    +     S +S++  C+R   
Sbjct: 181 IFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSR--- 237

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                         S   HG+Q+H   +K G++ ++++ ++L+DMYAK G+MD A + F 
Sbjct: 238 -------------LSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFD 284

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            +  +++V+WN MI GY Q     KA+EL + M +   +PD VT I +L  C  SG +  
Sbjct: 285 TMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDK 344

Query: 357 GREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
               F+SM +     P    +  ++ +  ++    E   L  +M     K D     ++L
Sbjct: 345 AMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMP---CKDDPIIWEVLL 401

Query: 412 SSCAAMGILESGK 424
           ++C      E GK
Sbjct: 402 AACVVHHNAELGK 414



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/453 (22%), Positives = 193/453 (42%), Gaps = 92/453 (20%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K  +++ A K+F+ +P   +VSWN LI+   + G   KA+ V + M   GF P  +T ++
Sbjct: 4   KCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSN 63

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  +     DV   R                                    +F+++S P+
Sbjct: 64  LLASCIKARDVHSAR-----------------------------------AMFDKISRPS 88

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             T+  ++SG  + ++  + +E+FR M  + V  D  +L+ +L  C++ G          
Sbjct: 89  VTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGI--------- 139

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+QVH  +++     D+ +++ L+DMY+K G +  A  IF+ + ER VV 
Sbjct: 140 -------LDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVC 192

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
           WN +I+G      + +A +  ++M+  G  P E +  +M+ +C R   I  GR++     
Sbjct: 193 WNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVM 252

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         FD+M   ++ +WN M+  Y+Q+    +A++
Sbjct: 253 KDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVE 312

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI---DNYVASGLIG 447
           LF  M     KPD  T   +L+ C+  G+++       +   +   I   ++Y    LI 
Sbjct: 313 LFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTC--LID 370

Query: 448 IYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
              +  R    E + H++P + D + W  ++A 
Sbjct: 371 ALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAA 403



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 68/117 (58%), Gaps = 5/117 (4%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA ++++G   + ++ + LI++Y+KC N   A+  FD M  K+I +WN ++    +
Sbjct: 244 GRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQ 303

Query: 67  SDDLEFAYKLFDEM----PERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVP 118
           +   + A +LF+ M     + + V++  +++    +GL +KA++ +N M N  G +P
Sbjct: 304 NGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIP 360


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 268/781 (34%), Positives = 436/781 (55%), Gaps = 51/781 (6%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           +KA   GK  HA ++        F+ N LI++Y KC++   A  +FD MP +D  SWNA+
Sbjct: 55  RKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAM 114

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L       D+  A KLFD MPER+VVSWN+LIS  + NG   K + V+ +M   G V   
Sbjct: 115 LFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDR 174

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T A V K+ ++L D   G + HGL +K+G D ++   +ALL +YAKC     ++  F  
Sbjct: 175 TTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHS 234

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M E N V+++A+++G  + D +   LE+F+ M +  V +   + +SV   CA        
Sbjct: 235 MPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCA-------- 286

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                     S    G Q+H   +K  F  D+ +  + LDMY K  ++  A+ +F++LP 
Sbjct: 287 --------GLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPN 338

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-VRSGDIKT--- 356
            ++ S+N +I GY +  +  +A+ + + ++  G   DEV+      AC V  GD++    
Sbjct: 339 HNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQV 398

Query: 357 -GREM------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
            G  M                              F+ M S    SWNA+++++ Q+ N 
Sbjct: 399 HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNE 458

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++ + LF  M   G++PD  T   +L +CA    L  G ++H   +K+   +D++V   L
Sbjct: 459 EKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIAL 518

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YSKC   E AE++  R+ E  +V WN++I+G SL     EA   F +M +  + P  
Sbjct: 519 IDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 578

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           F++AT+L +CA L +   G+Q+HAQI K    +D ++ S L++MY KCG++   +  F+ 
Sbjct: 579 FTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEK 638

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
              ++ VTWN M+ GYAQ+G G+EA+++++ M    VKP+  TF+A+L AC H GLV+ G
Sbjct: 639 APNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKG 698

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
           +  F+SM  ++G++P L+HY+C++D +GR+G   +A  LI+ MP + D VIW  LLS C+
Sbjct: 699 LHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICK 758

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
           +H NV +A++AA  + +L+P++SA Y LL+NIY++ G W+++  +R++M  N + K+P  
Sbjct: 759 IHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGC 818

Query: 746 S 746
           S
Sbjct: 819 S 819



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 166/623 (26%), Positives = 295/623 (47%), Gaps = 64/623 (10%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T + +F+  +    +  G++ H  +I       ++V N L+ +Y KC   + A  VF+ M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSV-----------SLSSVLG 229
            + + V++ AM+ G A    +  A ++F  M  R  VS +S+            +  V  
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 230 VCAREGCGVESDVFA---QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
              R G   +   FA   +S +    +  G Q+H L +K+GF+ D+   ++LLDMYAK  
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG------------- 333
            +D +   F ++PE++ VSW+ +IAG  Q       +EL + M+  G             
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283

Query: 334 ----------------------FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSS 371
                                 F  D V     L   ++  ++   +++F+S+P+ ++ S
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM-GILESGKQVHAAS 430
           +NA++  Y++S+   EA+ +FR +Q  G+  D  +L+    +CA + G LE G QVH  S
Sbjct: 344 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE-GLQVHGLS 402

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
           +K+    +  VA+ ++ +Y KC     A  VF  +   D V WN++IA    N  + +  
Sbjct: 403 MKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTL 462

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             F  M Q+ M P +F++ +VL +CA   +   G ++H +I K     D FVG ALI+MY
Sbjct: 463 SLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMY 522

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            KCG +  A +  D +  +  V+WN +I G++     +EA + +  M+  GV PD+ T+ 
Sbjct: 523 SKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYA 582

Query: 611 AILTACSHSGLVDVGVEIF-----NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            IL  C++   V++G +I        +Q D  +   L      +D   + G+  + +++ 
Sbjct: 583 TILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTL------VDMYSKCGNMQDFQLIF 636

Query: 666 DEMPCKDDPVIWEVLLSSCRLHA 688
           ++ P + D V W  ++     H 
Sbjct: 637 EKAPNR-DFVTWNAMVCGYAQHG 658



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 36/306 (11%)

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
           ++     + T + I   C+    L  GKQ HA  + T      +V + LI +Y KC   E
Sbjct: 35  YQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLE 94

Query: 457 LAERVFHRIPELDIVCWNSMIAG----------------------LSLNSLDIEAFM--- 491
            A +VF  +P+ D V WN+M+ G                      +S NSL I  ++   
Sbjct: 95  FAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSL-ISGYLHNG 153

Query: 492 -------FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
                   F QM +      + +FA VL SC+ L     G Q+H    K G+  D+  GS
Sbjct: 154 DHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGS 213

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
           AL++MY KC  +  + QFF  M  KN V+W+ +I G  QN      + L+K+M  +GV  
Sbjct: 214 ALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGV 273

Query: 605 DDITFVAILTACSHSGLVDVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
              TF ++  +C+    + +G ++  ++++ D G + ++   T  +D   +  +  +A+ 
Sbjct: 274 SQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIG--TATLDMYMKCNNLSDAQK 331

Query: 664 LIDEMP 669
           L + +P
Sbjct: 332 LFNSLP 337


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/776 (34%), Positives = 435/776 (56%), Gaps = 53/776 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  HA ++  G    TF+ N L+++Y KC     A  +FDKM  +D+ S+N+I+S    
Sbjct: 68  GKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYAS 127

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             +++ A K F EMPER+VVSWN++IS  ++NG   K++ V+ +M   G      +LA V
Sbjct: 128 CGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVV 187

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA  AL + + G + HGLV+K G D ++   +ALL +YAKC     ++ VF E+ E N 
Sbjct: 188 LKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNW 247

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++AM++G  + DR VE LE+F+ M    V +     +S+   CA              
Sbjct: 248 VSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCA-------------- 293

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S    G+++H   +K  F +D+ +  + LDMYAK G M  A+ + S++P+ S+ S+
Sbjct: 294 --ALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSY 351

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR-SGDIKTGRE------ 359
           N +I GY +  +  +A++  Q +   G   DE+T    L AC    GD++ GR+      
Sbjct: 352 NAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLE-GRQVHGLAV 410

Query: 360 -----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +FD M      SWNA++++  Q+ N +E + 
Sbjct: 411 KSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLA 470

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            F  M    ++PD  T   +L +CA    L +G ++H   +K+    D++V + L+ +Y 
Sbjct: 471 HFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYC 530

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   E A+++  R  +  +V WN++I+G SL     +A  FF +M +  + P  F++A 
Sbjct: 531 KCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAA 590

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           VL +CA L++   G+Q+HAQI K    +D+++ S L++MY KCG++  ++  F+    ++
Sbjct: 591 VLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRD 650

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            VTWN M+ GYA +G G+EA++L++ M    VKP+  TFV++L AC+H GLVD G+  F+
Sbjct: 651 FVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFD 710

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
            M  ++G++P  +HY+CM+D LGR+G   EA  L+ +MP + D VIW  LLS C++H NV
Sbjct: 711 VMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNV 770

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +A++A   L +LDP++S+   LL+NIY+  G W ++  +R++M  N + K+P  S
Sbjct: 771 EVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCS 826



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 184/659 (27%), Positives = 322/659 (48%), Gaps = 63/659 (9%)

Query: 113 NEGFVPTHI-TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
           N+   P  I T + +++  +    +  G++ H  +I  G +   +V+N L+ +Y KC + 
Sbjct: 41  NQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYL 100

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSVSLSSVL-- 228
            +A  VF++M   + V++ +++SG A    +  A + F  M  R  VS +SV +S  L  
Sbjct: 101 DYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSV-ISGFLQN 159

Query: 229 GVCARE--------GCGVESD-----VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
           G C +          CGV  D     V  ++         G QVH L +K GF+ D+   
Sbjct: 160 GECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTG 219

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           ++LL MYAK   +D +  +FS LPE++ VSW+ MIAG  Q  ++ + +EL + M+  G  
Sbjct: 220 SALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVG 279

Query: 336 PDEVTSINMLVACVRSGDIKTGREM----------------------------------- 360
             +    ++  +C     ++ G+E+                                   
Sbjct: 280 VSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKV 339

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM-GI 419
             SMP  S+ S+NA++  Y++S+   +A+K F+ +   G+  D  TL+  L++CA++ G 
Sbjct: 340 LSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGD 399

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           LE G+QVH  ++K+ S  +  VA+ ++ +Y KC+    A  +F  +   D V WN++IA 
Sbjct: 400 LE-GRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAA 458

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
              N  + E    F  M  + M P  F++ +VL +CA   +   G ++H +I K G   D
Sbjct: 459 CEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFD 518

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
            FVG+AL++MYCKCG I  A +  D    K  V+WN +I G++     ++A + +  M+ 
Sbjct: 519 SFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLE 578

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC--MIDCLGRAGH 657
            GV PD+ T+ A+L  C++   V +G +I   +      E   D Y C  ++D   + G+
Sbjct: 579 MGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQ---ELQSDVYICSTLVDMYSKCGN 635

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE--ELFRLDPKNSAPYSLL 714
             +++++ ++ P + D V W  +L     H     A +  E  +L  + P ++   S+L
Sbjct: 636 MQDSQLMFEKAPNR-DFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVL 693



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 197/436 (45%), Gaps = 55/436 (12%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +  + G+ +H   +++    +  + N ++++Y KC     A  LFD M  +D  SWNAI 
Sbjct: 397 RGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAI- 455

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                         I+A  +NG EE+ L+ +  M +    P   
Sbjct: 456 ------------------------------IAACEQNGNEEETLAHFASMIHSRMEPDDF 485

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  SV KA      +  G   H  +IK G+  + +V  AL+ +Y KCG  + A  + +  
Sbjct: 486 TYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRT 545

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            +   V++ A++SG +   +  +A + F  M+   V+ D+ + ++VL  CA         
Sbjct: 546 EQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCA--------- 596

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    +    G+Q+H   IK   ++D+++ ++L+DMY+K G+M  ++++F   P R
Sbjct: 597 -------NLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNR 649

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
             V+WN M+ GY       +A++L + M+    +P+  T +++L AC   G +  G   F
Sbjct: 650 DFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYF 709

Query: 362 DSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           D M S     P    ++ M+    +S    EA+ L ++M F   + D      +LS C  
Sbjct: 710 DVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPF---EADAVIWRNLLSVCKI 766

Query: 417 MGILESGKQVHAASLK 432
            G +E  ++   A L+
Sbjct: 767 HGNVEVAEKATRALLQ 782



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 132/312 (42%), Gaps = 47/312 (15%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++A   G  +H  I+++G+  D+F+   L+++Y KC     A  + D+   K + SWNAI
Sbjct: 497 RQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAI 556

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +S        E A+K F  M E                                G  P +
Sbjct: 557 ISGFSLLQQSEDAHKFFSRMLEM-------------------------------GVNPDN 585

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T A+V      L  V  G++ H  +IK  L  ++Y+ + L+ +Y+KCG  + +  +FE+
Sbjct: 586 FTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEK 645

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
               + VT+ AM+ G A      EAL++F  M    V  +  +  SVL  CA  G     
Sbjct: 646 APNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGL---- 701

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP- 299
                      + +H   V  +  + G +      + ++D+  ++G +D A  +   +P 
Sbjct: 702 ---------VDKGLHYFDV--MLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPF 750

Query: 300 ERSVVSWNVMIA 311
           E   V W  +++
Sbjct: 751 EADAVIWRNLLS 762



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 35/225 (15%)

Query: 493 FKQMRQNEMYPTQ--FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
           F  + QN+  P     +F+ +   C+K +S   G+Q HA++   G+    FV + L++MY
Sbjct: 35  FSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMY 94

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA---------------------------- 582
            KC  +  A + FD M+ ++ V++N +I GYA                            
Sbjct: 95  IKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVIS 154

Query: 583 ---QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
              QNG   +++ ++ +M   GV  D  +   +L AC      D+GV++ + + +  G +
Sbjct: 155 GFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQV-HGLVVKFGFD 213

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
             +   + ++    +     ++  +  E+P K + V W  +++ C
Sbjct: 214 CDVVTGSALLGMYAKCKRLDDSLSVFSELPEK-NWVSWSAMIAGC 257


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 258/782 (32%), Positives = 436/782 (55%), Gaps = 52/782 (6%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++A   GK  HAH++ +G     F+ N LI++Y KC     A  +F++MP +DI SWN +
Sbjct: 37  RRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTM 96

Query: 61  LSAQCKSDDLEFAYKLFDEMPER-NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           +     +  +E A  +F+ MP   +VVSWN+LIS  ++NG  +K+++V+ KM + G +  
Sbjct: 97  VFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFD 156

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           H TLA   K  + L D   G + HG+ +++G D ++   +AL+ +YAKC   + ++ VF 
Sbjct: 157 HTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFS 216

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           E+ + N ++++A ++G  + D+++  L++F+ M RK + +   + +SV   CA       
Sbjct: 217 ELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCA------- 269

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                      S +  G Q+HC  +K  F +D+ +  + LDMYAK  +M  A  +FS LP
Sbjct: 270 ---------GLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLP 320

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA------------ 347
           + ++ S+N MI GY +  Q  +A +L  +++   F  DEV+    L A            
Sbjct: 321 DHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQ 380

Query: 348 --------------CV---------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                         CV         + G +     +FD M      SWNA++++  Q+E+
Sbjct: 381 LHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNES 440

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
             + +  F  M    ++PD  T   +L +CA      +G +VH   +K+   +  +V S 
Sbjct: 441 EGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSA 500

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           L+ +YSKC   E AE++ +R+ E  +V WN++I+G SL     ++  FF  M +  + P 
Sbjct: 501 LVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPD 560

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            F++ATVL +CA L++   G+Q+HAQ+ K   ++D+++ S L++MY KCG+++ +   F 
Sbjct: 561 NFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFR 620

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
               +++VTWN MI G+A +G G+EA+ L++ M+   +KP+  TFV++L ACSH G    
Sbjct: 621 KAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKK 680

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G+  F  M   + +EP L+HY+CM+D LGR+G   EA  LI +MP + D +IW  LLS C
Sbjct: 681 GLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSIC 740

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           ++  NV +A++AA  L +LDP++S+ Y+LL+NIY+  G W  +  +R+ M  + + K+P 
Sbjct: 741 KIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPG 800

Query: 745 YS 746
            S
Sbjct: 801 CS 802



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 165/645 (25%), Positives = 305/645 (47%), Gaps = 66/645 (10%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T + +F+  +    ++ G+  H  +I  G    ++V N L+ +Y KC   ++A  VFEEM
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG------ 235
            + + V++  M+ G A   R+  A  +F  M       D VS +S++    + G      
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHG---DVVSWNSLISGYLQNGDIQKSI 142

Query: 236 --------CGVESD-----VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
                    GV  D     V  +  +     V G Q+H + +++GF+ D+   ++L+DMY
Sbjct: 143 AVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMY 202

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           AK   ++ +  +FS LP+++ +SW+  IAG  Q  Q  + ++L + M+  G    + T  
Sbjct: 203 AKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYA 262

Query: 343 NMLVACV-----RSG--------------DIKTGR----------------EMFDSMPSP 367
           ++  +C      R G              D+  G                 ++F  +P  
Sbjct: 263 SVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDH 322

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           ++ S+NAM+  Y+++E   +A KLF ++Q      D  +L+  LS+ A +     G Q+H
Sbjct: 323 NLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLH 382

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
             ++K+    +  VA+ ++ +Y KC     A  +F  +   D V WN++I     N  + 
Sbjct: 383 GLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEG 442

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           +    F  M +++M P +F++ +VL +CA   +   G +VH +I K G    +FVGSAL+
Sbjct: 443 KTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALV 502

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
           +MY KCG +  A +    +  +  V+WN +I G++     +++ R +  M+  GV+PD+ 
Sbjct: 503 DMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNF 562

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLI 665
           T+  +L  C++   V +G +I   M     +E + D Y  + ++D   + G+ H++ ++ 
Sbjct: 563 TYATVLDTCANLATVGLGKQIHAQMI---KLELLSDVYITSTLVDMYSKCGNMHDSLLMF 619

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            + P K D V W  ++     H    L + A E    +  +N  P
Sbjct: 620 RKAP-KRDSVTWNAMICGFAYHG---LGEEALELFEHMLHENIKP 660



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 35/299 (11%)

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
           R T + I   C+    L+ GK+ HA  + +      +V + LI +Y KC   E A +VF 
Sbjct: 24  RKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFE 83

Query: 464 RIPELDIVCWNSMIAG-----------------------LSLNSL--------DIE-AFM 491
            +P+ DIV WN+M+ G                       +S NSL        DI+ +  
Sbjct: 84  EMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIA 143

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            F +MR   +     + A  L  C+ L     G Q+H    + G+  D+  GSAL++MY 
Sbjct: 144 VFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYA 203

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KC  +  +   F  +  KN ++W+  I G  QN      ++L+K+M   G+     T+ +
Sbjct: 204 KCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYAS 263

Query: 612 ILTACSHSGLVDVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           +  +C+      +G ++  ++++ D G + I+   T  +D   +  +  +A  L   +P
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALKTDFGSDVIVG--TATLDMYAKCDNMSDAYKLFSLLP 320


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 255/780 (32%), Positives = 417/780 (53%), Gaps = 51/780 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   GK  HA I   G     F+ N L++ Y KC N + A ++FDKMP +D+ SWN ++
Sbjct: 52  KAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMI 111

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                  ++EFA  LFD MPER+VVSWN+++S  ++NG   K++ ++ KM        + 
Sbjct: 112 FGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYA 171

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T A V KA T + D   G + H L I++G D ++    AL+ +Y+ C    HA  +F EM
Sbjct: 172 TFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEM 231

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E N V ++A+++G  + DR  E L+++++M+ + + +   + +S    CA         
Sbjct: 232 PERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCA--------- 282

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    S    G Q+H   +K  F  D  +  + LDMYAK   M  A  +F+  P  
Sbjct: 283 -------GLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNP 335

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
           +  S N +I GY ++ Q  +A+E+ + ++    + DE++    L AC             
Sbjct: 336 TRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLH 395

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G +     +FD M      SWNA+++++ Q+E+ +
Sbjct: 396 GLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVE 455

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           E + LF  M    ++PD  T   ++ +CA    L  G +VH   +K+   +D +V S +I
Sbjct: 456 ETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAII 515

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y KC     AE++  R+ E   V WNS+I+G S       A  +F +M Q  + P  F
Sbjct: 516 DMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNF 575

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++ATVL  CA L++   G+Q+H QI K    +D+++ S +++MY KCG++  +R  F+  
Sbjct: 576 TYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKA 635

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++ VTW+ MI  YA +G G++A++L+++M    VKP+   F+++L AC+H G VD G+
Sbjct: 636 PKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGL 695

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
             F  M+  +G++P ++HY+CM+D LGR+G  +EA  LI+ MP + D VIW  LL  CRL
Sbjct: 696 HYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRL 755

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             NV +A++AA  L +LDP++S+ Y LL+N+Y+  G W ++  +R  M    + K+P  S
Sbjct: 756 QGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCS 815



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 172/665 (25%), Positives = 319/665 (47%), Gaps = 72/665 (10%)

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNI 155
           + N       ++++  SN+      +T + +F+  + L  +  G++ H  +   G    +
Sbjct: 14  ILNSQTTPPYAIHSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTV 73

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
           +V+N LL  Y KC    +A  VF++M + + +++  M+ G A    +  A  +F  M  +
Sbjct: 74  FVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPER 133

Query: 216 AVSIDSVSLSSVLGVCAREGCGVES-DVFA-------QSDN-------KFSRNVH----G 256
               D VS +S+L    + G   +S ++F        Q D        K    +     G
Sbjct: 134 ----DVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLG 189

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
            QVHCL I++GF++D+    +L+DMY+    +D A  IF  +PER+ V W+ +IAGY + 
Sbjct: 190 LQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRN 249

Query: 317 YQSTKAIELLQRM----------------KSCG-------------------FEPDEVT- 340
            + T+ ++L + M                +SC                    F  D +  
Sbjct: 250 DRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVG 309

Query: 341 --SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
             +++M   C R  D    R++F++ P+P+  S NA++  Y++ +   EA+++FR +Q  
Sbjct: 310 TATLDMYAKCDRMVD---ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKS 366

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
            +  D  +L+  L++C+A+     G Q+H  ++K     +  VA+ ++ +Y+KC     A
Sbjct: 367 YLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEA 426

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
             +F  +   D V WN++IA    N    E    F  M ++ M P  ++F +V+ +CA  
Sbjct: 427 CLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGK 486

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
            +   G +VH ++ K G   D FVGSA+I+MYCKCG +  A +  + +  + TV+WN +I
Sbjct: 487 KALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSII 546

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS---MQLD 635
            G++    G+ A+  +  M+  GV PD+ T+  +L  C++   V++G +I      +QL 
Sbjct: 547 SGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLH 606

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
             V       + ++D   + G+  ++ ++ ++ P K D V W  ++ +   H     A +
Sbjct: 607 SDVYIA----STIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICAYAYHGLGEDAIK 661

Query: 696 AAEEL 700
             EE+
Sbjct: 662 LFEEM 666



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 139/312 (44%), Gaps = 47/312 (15%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           KKA   G  +H  ++++G+  D F+ + +I++Y KC     A+ + +++  +   SWN+I
Sbjct: 486 KKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSI 545

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
                                          IS        E ALS +++M   G +P +
Sbjct: 546 -------------------------------ISGFSSEKQGENALSYFSRMLQVGVIPDN 574

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T A+V      L  VE G++ HG ++K+ L  ++Y+A+ ++ +Y+KCG  + +  +FE+
Sbjct: 575 FTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEK 634

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
             + + VT++AM+   A      +A+++F  M  + V  +     SVL  CA  G     
Sbjct: 635 APKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMG----- 689

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP- 299
             F      + R +            G +  +   + ++D+  ++G ++ A  +  ++P 
Sbjct: 690 --FVDKGLHYFREMRSH--------YGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPF 739

Query: 300 ERSVVSWNVMIA 311
           E   V W  ++ 
Sbjct: 740 EADDVIWRTLLG 751


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 249/780 (31%), Positives = 422/780 (54%), Gaps = 51/780 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   GK  HA ++        ++ N L++ Y K +N + A  +FD+MPH+D+ SWN ++
Sbjct: 20  KALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRDVISWNTMI 79

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
               +  ++ FA  LFD MPER+VVSWN+L+S  + NG+  K++ ++ +M +      + 
Sbjct: 80  FGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYA 139

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T + V KA + + D   G + H L I++G + ++   +AL+ +Y+KC     A  +F EM
Sbjct: 140 TFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREM 199

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E N V ++A+++G  + DR +E L++F+ M++  + +   + +SV   CA         
Sbjct: 200 PERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCA--------- 250

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    S    G Q+H   +K  F  D  +  + LDMYAK   M  A  +F+ LP  
Sbjct: 251 -------GLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNP 303

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------ 349
              S+N +I GY ++ Q  KA+E+ Q ++      DE++    L AC             
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLH 363

Query: 350 -----------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G +     +FD M      SWNA+++++ Q+E   
Sbjct: 364 GLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIV 423

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           + + LF  M    ++PD  T   ++ +CA    L  G ++H   +K+   +D +V S L+
Sbjct: 424 KTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALV 483

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y KC     AE++  R+ E   V WNS+I+G S       A  +F QM +  + P  F
Sbjct: 484 DMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNF 543

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++ATVL  CA +++   G+Q+HAQI K    +D+++ S L++MY KCG++  +R  F+  
Sbjct: 544 TYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKT 603

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++ VTW+ MI  YA +G+G++A++L+++M    VKP+   F+++L AC+H G VD G+
Sbjct: 604 PKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGL 663

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
             F  MQ  +G++P ++HY+CM+D LGR+   +EA  LI+ M  + D VIW  LLS+C++
Sbjct: 664 HYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKM 723

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             NV +A++A   L +LDP++S+ Y LLAN+Y+++G W ++  +R +M    + K+P  S
Sbjct: 724 QGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCS 783



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 164/644 (25%), Positives = 307/644 (47%), Gaps = 61/644 (9%)

Query: 118 PTH-ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           PT   T + + +  + L  +  G++ H  +I       IYVAN L+  Y K     +A  
Sbjct: 3   PTKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFK 62

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VF+ M   + +++  M+ G A+   +  A  +F  M  +    D VS +S+L      G 
Sbjct: 63  VFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPER----DVVSWNSLLSCYLHNGV 118

Query: 237 GVES-DVFAQSDN--------KFSRNVH----------GQQVHCLTIKLGFEADLHLSNS 277
             +S ++F +  +         FS  +           G QVHCL I++GFE D+   ++
Sbjct: 119 NRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSA 178

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L+DMY+K   +D A  IF  +PER++V W+ +IAGY Q  +  + ++L + M   G    
Sbjct: 179 LVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVS 238

Query: 338 EVTSINMLVACVRSGDIKTGREM-----------------------------------FD 362
           + T  ++  +C      K G ++                                   F+
Sbjct: 239 QSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFN 298

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
           ++P+P   S+NA++  Y++ +   +A+++F+ +Q   +  D  +L+  L++C+ +     
Sbjct: 299 TLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLE 358

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           G Q+H  ++K     +  VA+ ++ +Y KC     A  +F  +   D V WN++IA    
Sbjct: 359 GIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQ 418

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           N   ++    F  M ++ M P  F++ +V+ +CA   +   G ++H +I K G   D FV
Sbjct: 419 NEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFV 478

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
           GSAL++MY KCG +  A +  D +  K TV+WN +I G++     + A R +  M+  GV
Sbjct: 479 GSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGV 538

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
            PD+ T+  +L  C++   +++G +I ++  L   +   +   + ++D   + G+  ++ 
Sbjct: 539 IPDNFTYATVLDVCANMATIELGKQI-HAQILKLNLHSDVYIASTLVDMYSKCGNMQDSR 597

Query: 663 MLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK 706
           ++ ++ P K D V W  ++ +   H +   A +  EE+  L+ K
Sbjct: 598 LMFEKTP-KRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVK 640



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 5/134 (3%)

Query: 501 MYPTQ-FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
           M PT+ F+F+ +L  C+ L +   G+Q HAQ+    +V  I+V + L++ YCK  ++  A
Sbjct: 1   MNPTKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYA 60

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
            + FD M  ++ ++WN MI GYA+ G    A  L+  M     + D +++ ++L+   H+
Sbjct: 61  FKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTM----PERDVVSWNSLLSCYLHN 116

Query: 620 GLVDVGVEIFNSMQ 633
           G+    +EIF  M+
Sbjct: 117 GVNRKSIEIFVRMR 130


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 257/775 (33%), Positives = 414/775 (53%), Gaps = 83/775 (10%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +HA ++  G+  D FL N LI +Y KC +      + D                    
Sbjct: 47  KRIHAQMVEAGVGPDIFLSNLLINMYVKCRS------VLD-------------------- 80

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                A+++F EMP R+V+SWN+LIS   + G ++KA  ++ +M N GF+P  IT  S+ 
Sbjct: 81  -----AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISIL 135

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A  +  ++E+G++ H  +IK G  ++  V N+LLS+Y KCG    A  VF  +S  + V
Sbjct: 136 TACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVV 195

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++  M+   A+   V E L +F  M  + +S D V+  ++L            D F    
Sbjct: 196 SYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLL------------DAFTTP- 242

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
              S    G+++H LT++ G  +D+ +  +L+ M  + GD+DSA+  F  + +R VV +N
Sbjct: 243 ---SMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYN 299

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------- 348
            +IA   Q   + +A E   RM+S G   +  T +++L AC                   
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359

Query: 349 ----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                            R GD+   RE+F +MP   + SWNA+++ Y++ E+  EA++L+
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLY 419

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           ++MQ  GVKP R T   +LS+CA       GK +H   L++    + ++A+ L+ +Y +C
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRC 479

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
                A+ VF      D++ WNSMIAG + +     A+  F++M+  E+ P   +FA+VL
Sbjct: 480 GSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVL 539

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           S C    +   G+Q+H +I + G   D+ +G+ALI MY +CG +  AR  F  +  ++ +
Sbjct: 540 SGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVM 599

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVK-PDDITFVAILTACSHSGLVDVGVEIFNS 631
           +W  MI G A  G   +A+ L+  M   G + PD  TF +IL+AC+H+GLV  G +IF+S
Sbjct: 600 SWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSS 659

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M+ ++GV P ++HY C++  LGRA  F EAE LI++MP   D  +WE LL +CR+H N+ 
Sbjct: 660 MESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIA 719

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LA+ AA    +L+ +N A Y LL+N+Y++ GRWDD+  +R +M    I K+P  S
Sbjct: 720 LAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 774



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/594 (26%), Positives = 283/594 (47%), Gaps = 92/594 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H+ I++ G   D  + N L+ +Y KC +   A+ +F  +  +D+            
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDV------------ 194

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                              VS+N ++    +    ++ L ++ +MS+EG  P  +T  ++
Sbjct: 195 -------------------VSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINL 235

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A T    ++ G+R H L ++ GL+ +I V  AL+++  +CG    A   F+ +++ + 
Sbjct: 236 LDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDV 295

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + A+++ LA+    VEA E +  M    V+++  +  S+L  C+     +E+      
Sbjct: 296 VVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSK-ALEA------ 348

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ +H    + G  +D+ + N+L+ MYA+ GD+  A  +F  +P+R ++SW
Sbjct: 349 ---------GKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISW 399

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
           N +IAGY ++    +A+ L ++M+S G +P  VT +++L AC                  
Sbjct: 400 NAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILR 459

Query: 350 ------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             R G +   + +F+   +  V SWN+M++ ++Q  +++ A KL
Sbjct: 460 SGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKL 519

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+EMQ   ++PD  T A +LS C     LE GKQ+H    ++   +D  + + LI +Y +
Sbjct: 520 FQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIR 579

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY--PTQFSFA 509
           C   + A  VFH +   D++ W +MI G +    D++A   F QM QNE +  P   +F 
Sbjct: 580 CGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQM-QNEGFRPPDGSTFT 638

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY-CKCGDIYGARQF 562
           ++LS+C       +G Q+ + +E +  V         IE Y C  G +  AR+F
Sbjct: 639 SILSACNHAGLVLEGYQIFSSMESEYGV------LPTIEHYGCLVGLLGRARRF 686



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 203/423 (47%), Gaps = 56/423 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA  AGKL+H+HI  +G   D  + N LI +Y++C +   A+ LF  MP +D+ SWNAI+
Sbjct: 344 KALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAII 403

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +   + +D                                 +A+ +Y +M +EG  P  +
Sbjct: 404 AGYARRED-------------------------------RGEAMRLYKQMQSEGVKPGRV 432

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T   +  A         G+  H  +++ G+  N ++ANAL+++Y +CG    A  VFE  
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGT 492

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + +++ +M++G A+      A ++F+ M  + +  D+++ +SVL  C          
Sbjct: 493 QARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGC---------- 542

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                 N  +  + G+Q+H    + G + D++L N+L++MY + G +  A  +F +L  R
Sbjct: 543 -----KNPEALEL-GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR 596

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE-PDEVTSINMLVACVRSGDIKTGREM 360
            V+SW  MI G   + +  KAIEL  +M++ GF  PD  T  ++L AC  +G +  G ++
Sbjct: 597 DVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQI 656

Query: 361 FDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
           F SM S     P++  +  ++    ++   +EA  L  +M F    PD      +L +C 
Sbjct: 657 FSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPF---PPDAAVWETLLGACR 713

Query: 416 AMG 418
             G
Sbjct: 714 IHG 716



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 163/309 (52%), Gaps = 7/309 (2%)

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
           Q R  + DR T   +L +C    +L   K++HA  ++     D ++++ LI +Y KC+  
Sbjct: 19  QPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 78

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
             A +VF  +P  D++ WNS+I+  +      +AF  F++M+     P + ++ ++L++C
Sbjct: 79  LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
              +    G+++H+QI K GY  D  V ++L+ MY KCGD+  ARQ F  +  ++ V++N
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            M+  YAQ  Y  E + L+  M + G+ PD +T++ +L A +   ++D G  I + + ++
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRI-HKLTVE 257

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA-NVRLAK 694
            G+   +   T ++    R G    A+     +  + D V++  L+++   H  NV    
Sbjct: 258 EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADR-DVVVYNALIAALAQHGHNV---- 312

Query: 695 RAAEELFRL 703
            A E+ +R+
Sbjct: 313 EAFEQYYRM 321


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/779 (32%), Positives = 432/779 (55%), Gaps = 58/779 (7%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  HA ++ +G   D ++ N L+++Y +C++ + A  +F+KM  +D+ S+N ++S    
Sbjct: 62  GKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYAD 121

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE---GFVPTHITL 123
           + ++  A + F + P+R+VVSWN+++S  ++NG   K++ V+  M      GF  T  T 
Sbjct: 122 AGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQT--TF 179

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A V KA + L D   G + HGL++++G  K++   +ALL +YAKC     ++ +F E+  
Sbjct: 180 AVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPV 239

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V ++A+++G  + D  +  LE+F+ M +  + +     +SV   CA           
Sbjct: 240 KNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCA----------- 288

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                  S    G Q+H   +K  F +D+ +  + LDMYAK G +  A+ IF++LP+ S+
Sbjct: 289 -----GLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSL 343

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR-SGDIKTGRE--- 359
             +N +I G  +  +  +A++  Q +   G   +E++      AC    GD+  GR+   
Sbjct: 344 QCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLD-GRQLHS 402

Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                           MFD M      SWNA+++++ Q+ N +E
Sbjct: 403 LSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEE 462

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
            + LF  M    ++PD+ T   +L +C++   L SG ++H   +K+   +D++V   LI 
Sbjct: 463 TLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALID 522

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y KC   E A+++  RI +  +V WN++IAG +L     +A  FF +M +  + P  F+
Sbjct: 523 MYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFT 582

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +A VL +CA L+S   G+Q+H QI K    +D+++ S L++MY KCG++  +   F+   
Sbjct: 583 YAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAP 642

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            K+ VTWN MI GYAQ+G G+EA+  ++ M    V+P+  TFV+IL AC+H G +D G+ 
Sbjct: 643 NKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLH 702

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            FN+M  ++G+EP ++HY+CMID +GR+G   EA  LI EMP + D VIW  LLS C++H
Sbjct: 703 YFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIH 762

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            N+ +A++A   + +L+P++S+   LL+NIY+  G W  +  +R++M  N + K+P  S
Sbjct: 763 GNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCS 821



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 172/656 (26%), Positives = 311/656 (47%), Gaps = 69/656 (10%)

Query: 113 NEGFVPTHI-TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
           N+  +PT I T + + +  +    ++ G++ H  +I  G   ++Y++N L+ +Y +C   
Sbjct: 35  NQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHL 94

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL--G 229
            +A  VFE+MS+ + +++  M+SG A    +  A E F    ++ V   +  LS  L  G
Sbjct: 95  NYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNG 154

Query: 230 VCAR-----------EGCGVESDVFA---QSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            C +           E  G +   FA   ++ +       G QVH L +++GF  D+   
Sbjct: 155 ECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTG 214

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK----- 330
           ++LLDMYAK   +D +  IFS +P ++ V W+ +IAG  Q  +    +EL + M+     
Sbjct: 215 SALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIG 274

Query: 331 ------------------------------SCGFEPDEVTSINMLVACVRSGDIKTGREM 360
                                          C F  D       L    + G +   + +
Sbjct: 275 VSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRI 334

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F+S+P  S+  +NA++    ++E   EA++ F+ +   G+  +  +L+   S+CA++   
Sbjct: 335 FNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGD 394

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
             G+Q+H+ S+K+    +  VA+ ++ +Y KC+    A  +F  +   D V WN++IA  
Sbjct: 395 LDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAH 454

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
             N  + E    F  M +  M P QF++ +VL +C+   +   G ++H +I K G   D 
Sbjct: 455 EQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDS 514

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           FVG ALI+MYCKCG I  A++  D +  +  V+WN +I G+    + ++A   + +M+  
Sbjct: 515 FVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKM 574

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG----VEPILDHY--TCMIDCLGR 654
            VKPD+ T+  +L AC++   V +G +I       HG    +E   D Y  + ++D   +
Sbjct: 575 SVKPDNFTYAIVLDACANLASVGLGKQI-------HGQIIKLELHSDVYITSTLVDMYSK 627

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            G+  ++ ++ ++ P K D V W  ++     H    L + A     R+  +N  P
Sbjct: 628 CGNMQDSALVFEKAPNK-DFVTWNAMICGYAQHG---LGEEALGYFERMQLENVRP 679



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 204/436 (46%), Gaps = 55/436 (12%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K  + G+ LH+  +++ L  +  + N ++++Y KC     A  +FD+M  +D  SWNA++
Sbjct: 392 KGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVI 451

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +A                                 +NG EE+ L+++  M      P   
Sbjct: 452 AAH-------------------------------EQNGNEEETLNLFASMLRLRMEPDQF 480

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  SV KA ++   +  G   H  +IK GL  + +V  AL+ +Y KCG  + A  + + +
Sbjct: 481 TYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRI 540

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            +   V++ A+++G        +A   F  M++ +V  D+ + + VL  CA         
Sbjct: 541 EQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACA--------- 591

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                 N  S  + G+Q+H   IKL   +D++++++L+DMY+K G+M  + ++F   P +
Sbjct: 592 ------NLASVGL-GKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNK 644

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
             V+WN MI GY Q     +A+   +RM+     P+  T +++L AC   G I  G   F
Sbjct: 645 DFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYF 704

Query: 362 DSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           ++M +     P +  ++ M+    +S    EA+KL +EM F   + D      +LS C  
Sbjct: 705 NAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPF---EADAVIWRTLLSICKI 761

Query: 417 MGILESGKQVHAASLK 432
            G +E  ++   A L+
Sbjct: 762 HGNIEIAEKATNAILQ 777



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 138/312 (44%), Gaps = 47/312 (15%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++A  +G  +H  I+++GL  D+F+   LI++Y KC     A+ + D++  + + SWNAI
Sbjct: 492 QQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAI 551

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           ++        E A+  F EM + +V                                P +
Sbjct: 552 IAGFTLLKHSEDAHSFFYEMLKMSV-------------------------------KPDN 580

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T A V  A   L  V  G++ HG +IK+ L  ++Y+ + L+ +Y+KCG  + +  VFE+
Sbjct: 581 FTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEK 640

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
               + VT+ AM+ G A+     EAL  F  M  + V  +  +  S+L  CA  G     
Sbjct: 641 APNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGF---- 696

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP- 299
                      + +H    + +  + G E  +   + ++D+  ++G +  A  +   +P 
Sbjct: 697 ---------IDKGLH--YFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPF 745

Query: 300 ERSVVSWNVMIA 311
           E   V W  +++
Sbjct: 746 EADAVIWRTLLS 757



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 109/241 (45%), Gaps = 48/241 (19%)

Query: 484 SLDIEAFMFFKQMRQNEM-YPTQF-SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
           +L I  F     ++QN+   PT+  +F+ ++  C+  +S   G+Q HA++   G++ D++
Sbjct: 20  TLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVY 79

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA------------------- 582
           + + L++MY +C  +  A + F+ M  ++ +++N MI GYA                   
Sbjct: 80  ISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRD 139

Query: 583 ------------QNGYGDEAVRLYKDMIAS-GVKPDDITFVAILTACSHSGLVDVGVEIF 629
                       QNG   +++ ++ DM  S  V  D  TF  +L ACS      +G+++ 
Sbjct: 140 VVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQV- 198

Query: 630 NSMQLDHGVEPILDHY------TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
                 HG+   +  Y      + ++D   +     ++  +  E+P K + V W  +++ 
Sbjct: 199 ------HGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVK-NWVCWSAIIAG 251

Query: 684 C 684
           C
Sbjct: 252 C 252


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 271/775 (34%), Positives = 416/775 (53%), Gaps = 82/775 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HAHI ++GL DD  + N LI LYSKC N                            
Sbjct: 75  GLQIHAHITKSGLSDDPSIRNHLINLYSKCRN---------------------------- 106

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                +A KL DE  E ++VSW+ LIS   +NGL   AL  +++M   G      T +SV
Sbjct: 107 ---FGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSV 163

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA + + D+  G++ HG+V+  G + +++VAN L+ +YAKC     +  +F+E+ E N 
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNV 223

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+ S   + D   EA+ +F  M+   +  +  SLSS++  C               
Sbjct: 224 VSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC--------------- 268

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                 +  G+ +H   IKLG++ D   +N+L+DMYAK GD+  A  +F  + +  +VSW
Sbjct: 269 -TGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSW 327

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N +IAG        +A+ELL +MK  G  P+  T  + L AC   G  + GR++      
Sbjct: 328 NAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMK 387

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F+ +P   + +WNA++S YSQ     EA+ L
Sbjct: 388 MDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSL 447

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F EM   G+  ++TTL+ IL S A + ++   +QVH  S+K+  H D YV + LI  Y K
Sbjct: 448 FVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGK 507

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E AER+F      D+V + SMI   +      EA   F +M+  E+ P +F  +++
Sbjct: 508 CSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSL 567

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L++CA LS+  QG+Q+H  I K G+V DIF G++L+ MY KCG I  A + F  +  +  
Sbjct: 568 LNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI 627

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           V+W+ MI G AQ+G+G +A++L+  M+  GV P+ IT V++L AC+H+GLV      F S
Sbjct: 628 VSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFES 687

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M+   G +P+ +HY CMID LGRAG  +EA  L+++MP + +  +W  LL + R+H +V 
Sbjct: 688 MEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVE 747

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L +RAAE LF L+P+ S  + LLANIY+S G+W+++  VR LM ++ + K+P  S
Sbjct: 748 LGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMS 802



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 176/650 (27%), Positives = 320/650 (49%), Gaps = 57/650 (8%)

Query: 90  NLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI 149
            LI  + +   + +  ++ N +    F PT ++ + +         +  G + H  + K 
Sbjct: 26  KLIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKS 85

Query: 150 GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
           GL  +  + N L++LY+KC    +A  + +E SEP+ V+++A++SG A+      AL  F
Sbjct: 86  GLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAF 145

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
             M    V  +  + SSVL     + C +  D+             G+QVH + +  GFE
Sbjct: 146 HEMHLLGVKCNEFTFSSVL-----KACSIVKDLRI-----------GKQVHGVVVVSGFE 189

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
            D+ ++N+L+ MYAK  +   ++ +F  +PER+VVSWN + + Y Q     +A+ L   M
Sbjct: 190 GDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEM 249

Query: 330 KSCGFEPDEVTSINMLVACV-----------------------------------RSGDI 354
              G +P+E +  +M+ AC                                    + GD+
Sbjct: 250 VLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDL 309

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                +F+ +  P + SWNA+++     E+H++A++L  +M+  G+ P+  TL+  L +C
Sbjct: 310 ADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKAC 369

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           A MG+ E G+Q+H++ +K     D +V+ GL+ +YSKC   E A   F+ +PE D++ WN
Sbjct: 370 AGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWN 429

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           ++I+G S    D+EA   F +M +  +   Q + +T+L S A L      RQVH    K 
Sbjct: 430 AIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS 489

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G+ +DI+V ++LI+ Y KC  +  A + F+     + V++  MI  YAQ G G+EA++L+
Sbjct: 490 GFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF 549

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT--CMIDCL 652
            +M    +KPD     ++L AC++    + G ++   + L +G   +LD +    +++  
Sbjct: 550 LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHI-LKYGF--VLDIFAGNSLVNMY 606

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
            + G   +A     E+  +   V W  ++     H + R A +   ++ +
Sbjct: 607 AKCGSIDDAGRAFSELT-ERGIVSWSAMIGGLAQHGHGRQALQLFNQMLK 655



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 161/324 (49%), Gaps = 10/324 (3%)

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           P+P +      +  +SQ       + L  +  F    P   + + +LS C     L  G 
Sbjct: 23  PAPKLIQ---TVPQFSQDPQTTAILNLIDKGNF---TPTSVSYSKLLSQCCTTKSLRPGL 76

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           Q+HA   K+    D  + + LI +YSKC+    A ++     E D+V W+++I+G + N 
Sbjct: 77  QIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNG 136

Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
           L   A M F +M    +   +F+F++VL +C+ +     G+QVH  +   G+  D+FV +
Sbjct: 137 LGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVAN 196

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
            L+ MY KC +   +++ FD +  +N V+WN +   Y Q  +  EAV L+ +M+ SG+KP
Sbjct: 197 TLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKP 256

Query: 605 DDITFVAILTACSHSGLVDVGV-EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           ++ +  +++ AC  +GL D    +I +   +  G +        ++D   + G   +A  
Sbjct: 257 NEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAIS 314

Query: 664 LIDEMPCKDDPVIWEVLLSSCRLH 687
           + +++  + D V W  +++ C LH
Sbjct: 315 VFEKIK-QPDIVSWNAVIAGCVLH 337


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 254/776 (32%), Positives = 426/776 (54%), Gaps = 84/776 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++++G+  D+ L N L+ +Y+KC + +                          
Sbjct: 147 GKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSAN-------------------------- 180

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                +A K+F E+PER+VVSW  LI+  V  G    A++++ +M  EG      T A+ 
Sbjct: 181 -----YACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATA 235

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA +  LD+E G++ H   IK+G   +++V +AL+ LYAKCG    A  VF  M + N 
Sbjct: 236 LKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNA 295

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+++G A+     + L +F  M    ++    +LS+VL  CA  G           
Sbjct: 296 VSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSG----------- 344

Query: 247 DNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                 N+  GQ VH L I++G E D  +S  L+DMY+K G    A  +F  + +  VVS
Sbjct: 345 ------NLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVS 398

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA---------------CV- 349
           W+ +I    QK QS +A E+ +RM+  G  P++ T  +++ A               CV 
Sbjct: 399 WSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVC 458

Query: 350 -------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G ++ G  +F++  +  + SWNA+LS +  +E     ++
Sbjct: 459 KYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLR 518

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +F +M   G  P+  T   IL SC+++  ++ GKQVHA  +K +   +++V + L+ +Y+
Sbjct: 519 IFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYA 578

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           K +  E AE +F+R+ + D+  W  ++AG + +    +A   F QM++  + P +F+ A+
Sbjct: 579 KNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLAS 638

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
            LS C+++++   GRQ+H+   K G   D+FV SAL++MY KCG +  A   FD +  ++
Sbjct: 639 SLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRD 698

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           TV+WN +I GY+Q+G G +A++ ++ M+  G  PD++TF+ +L+ACSH GL++ G + FN
Sbjct: 699 TVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFN 758

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           S+   +G+ P ++HY CM+D LGRAG FHE E  I+EM    + +IWE +L +C++H N+
Sbjct: 759 SLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNI 818

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
              +RAA +LF L+P+  + Y LL+N++++ G WDD+  VR LMS   + K+P  S
Sbjct: 819 EFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCS 874



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 171/602 (28%), Positives = 300/602 (49%), Gaps = 53/602 (8%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D+  G+  HG VIK G++ + ++ N+L+++YAKCG   +A  VF E+ E + V++TA+++
Sbjct: 143 DLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALIT 202

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G         A+ +F  M R+ V  +  + ++ L  C+   C          D +F    
Sbjct: 203 GFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSM--C---------LDLEF---- 247

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+QVH   IK+G  +DL + ++L+D+YAK G+M  AE +F  +P+++ VSWN ++ G+ 
Sbjct: 248 -GKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFA 306

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------- 358
           Q   + K + L  RM        + T   +L  C  SG+++ G+                
Sbjct: 307 QMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEF 366

Query: 359 -------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                              ++F  +  P V SW+A+++   Q    +EA ++F+ M+  G
Sbjct: 367 ISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSG 426

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V P++ TLA ++S+   +G L  G+ +HA   K     DN V + L+ +Y K    +   
Sbjct: 427 VIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGC 486

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           RVF      D++ WN++++G   N         F QM      P  ++F ++L SC+ LS
Sbjct: 487 RVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLS 546

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
               G+QVHAQI K+    + FVG+AL++MY K   +  A   F+ +  ++   W  ++ 
Sbjct: 547 DVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVA 606

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GYAQ+G G++AV+ +  M   GVKP++ T  + L+ CS    +D G ++ +SM +  G  
Sbjct: 607 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL-HSMAIKAGQS 665

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
             +   + ++D   + G   +AE++ D +  + D V W  ++     H     A +A E 
Sbjct: 666 GDMFVASALVDMYAKCGCVEDAEVVFDGLVSR-DTVSWNTIICGYSQHGQGGKALKAFEA 724

Query: 700 LF 701
           + 
Sbjct: 725 ML 726



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 207/455 (45%), Gaps = 82/455 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+++H+  +R G   D F+   L+++YSKC     A  +F ++   D+ SW+AI     
Sbjct: 348 AGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAI----- 402

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                     I+ L + G   +A  V+ +M + G +P   TLAS
Sbjct: 403 --------------------------ITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLAS 436

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A+T L D+ +G   H  V K G + +  V NAL+++Y K G  +    VFE  +  +
Sbjct: 437 LVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRD 496

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++ A++SG    +     L +F  M+ +  + +  +  S+L       C   SDV   
Sbjct: 497 LISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISIL-----RSCSSLSDVDL- 550

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+QVH   +K   + +  +  +L+DMYAKN  ++ AE IF+ L +R + +
Sbjct: 551 ----------GKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFA 600

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
           W V++AGY Q  Q  KA++   +M+  G +P+E T  + L  C R   + +GR++     
Sbjct: 601 WTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAI 660

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         FD + S    SWN ++  YSQ     +A+K
Sbjct: 661 KAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALK 720

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
            F  M   G  PD  T   +LS+C+ MG++E GK+
Sbjct: 721 AFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK 755



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 167/323 (51%), Gaps = 14/323 (4%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L +CA+ G L  GK +H   +K+  + D+++ + L+ +Y+KC     A +VF  IPE D
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W ++I G         A   F +MR+  +   +F++AT L +C+       G+QVHA
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
           +  K G  +D+FVGSAL+++Y KCG++  A + F  M  +N V+WN +++G+AQ G  ++
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT--C 647
            + L+  M  S +     T   +L  C++SG +  G +I +S+ +  G E  LD +   C
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAG-QIVHSLAIRIGCE--LDEFISCC 370

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDP--VIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
           ++D   + G   +A  +   +   +DP  V W  +++        R    AAE   R+  
Sbjct: 371 LVDMYSKCGLAGDALKVFVRI---EDPDVVSWSAIITCLDQKGQSR---EAAEVFKRMRH 424

Query: 706 KNSAPYSL-LANIYSSLGRWDDL 727
               P    LA++ S+     DL
Sbjct: 425 SGVIPNQFTLASLVSAATDLGDL 447



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 2/175 (1%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           ++ +L +CA      +G+ +H Q+ K G   D  + ++L+ +Y KCG    A + F  + 
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ V+W  +I G+   GYG  AV L+ +M   GV+ ++ T+   L ACS    ++ G +
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           + ++  +  G    L   + ++D   + G    AE +   MP K + V W  LL+
Sbjct: 251 V-HAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALLN 303



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 37/212 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ LH+  ++ G   D F+ + L+++Y+KC     A+ +FD +  +D  SWN I     
Sbjct: 651 SGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTI----- 705

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                     I    ++G   KAL  +  M +EG VP  +T   
Sbjct: 706 --------------------------ICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIG 739

Query: 126 VFKASTALLDVEHGRRCHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           V  A + +  +E G++    + KI G+   I     ++ +  + G         EEM   
Sbjct: 740 VLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLT 799

Query: 185 NEVTFTAMMSGLAKTDRVVE-----ALEMFRL 211
           + V     + G  K    +E     A+++F L
Sbjct: 800 SNVLIWETVLGACKMHGNIEFGERAAMKLFEL 831


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 265/748 (35%), Positives = 411/748 (54%), Gaps = 55/748 (7%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HAHI ++GL DD  + N LI LYSKC                              
Sbjct: 75  GLQIHAHITKSGLSDDPSIRNHLINLYSKCRX---------------------------- 106

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                +A KL DE  E ++VSW+ LIS   +NGL   AL  +++M   G      T +SV
Sbjct: 107 ---FGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSV 163

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA + + D+  G++ HG+V+  G + +++VAN L+ +YAKC     +  +F+E+ E N 
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNV 223

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+ S   + D   EA+ +F  M+   +  +  SLSS++  C               
Sbjct: 224 VSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC--------------- 268

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                 +  G+ +H   IKLG++ D   +N+L+DMYAK GD+  A  +F  + +  +VSW
Sbjct: 269 -TGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSW 327

Query: 307 NVMIAGYGQKYQSTKAIELLQRMK--------SCGFEPDEVTSINMLVACVRSGDIKTGR 358
           N +IAG        +A+ELL +MK            E D   S+ ++    +   ++  R
Sbjct: 328 NAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDAR 387

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
             F+ +P   + +WNA++S YSQ     EA+ LF EM   G+  ++TTL+ IL S A + 
Sbjct: 388 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQ 447

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
           ++   +QVH  S+K+  H D YV + LI  Y KC   E AER+F      D+V + SMI 
Sbjct: 448 VVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMIT 507

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
             +      EA   F +M+  E+ P +F  +++L++CA LS+  QG+Q+H  I K G+V 
Sbjct: 508 AYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVL 567

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           DIF G++L+ MY KCG I  A + F  +  +  V+W+ MI G AQ+G+G +A++L+  M+
Sbjct: 568 DIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQML 627

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
             GV P+ IT V++L AC+H+GLV      F SM+   G +P+ +HY CMID LGRAG  
Sbjct: 628 KEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKI 687

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
           +EA  L+++MP + +  +W  LL + R+H +V L +RAAE LF L+P+ S  + LLANIY
Sbjct: 688 NEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIY 747

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +S G+W+++  VR LM ++ + K+P  S
Sbjct: 748 ASAGKWENVAEVRRLMRDSKVKKEPGMS 775



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/627 (26%), Positives = 310/627 (49%), Gaps = 38/627 (6%)

Query: 90  NLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI 149
            LI  + +   + +  ++ N +    F PT ++ + +         +  G + H  + K 
Sbjct: 26  KLIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKS 85

Query: 150 GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
           GL  +  + N L++LY+KC    +A  + +E SEP+ V+++A++SG A+      AL  F
Sbjct: 86  GLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAF 145

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
             M    V  +  + SSVL     + C +  D+             G+QVH + +  GFE
Sbjct: 146 HEMHLLGVKCNEFTFSSVL-----KACSIVKDLRI-----------GKQVHGVVVVSGFE 189

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
            D+ ++N+L+ MYAK  +   ++ +F  +PER+VVSWN + + Y Q     +A+ L   M
Sbjct: 190 GDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEM 249

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVS----SWNAMLSSYSQSENH 385
              G +P+E +  +M+ AC    D   G+ +   +          S NA++  Y++  + 
Sbjct: 250 VLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDL 309

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCA-------AMGIL-ESGKQVHAASLKTASHI 437
            +AI +F +++    +PD  +   +++ C        A+ +L +  +Q+H++ +K     
Sbjct: 310 ADAISVFEKIK----QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMES 365

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D +V+ GL+ +YSKC   E A   F+ +PE D++ WN++I+G S    D+EA   F +M 
Sbjct: 366 DLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH 425

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           +  +   Q + +T+L S A L      RQVH    K G+ +DI+V ++LI+ Y KC  + 
Sbjct: 426 KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVE 485

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A + F+     + V++  MI  YAQ G G+EA++L+ +M    +KPD     ++L AC+
Sbjct: 486 DAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACA 545

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYT--CMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           +    + G ++   + L +G   +LD +    +++   + G   +A     E+  +   V
Sbjct: 546 NLSAFEQGKQLHVHI-LKYGF--VLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIV 601

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFR 702
            W  ++     H + R A +   ++ +
Sbjct: 602 SWSAMIGGLAQHGHGRQALQLFNQMLK 628



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 175/349 (50%), Gaps = 13/349 (3%)

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P   + + +LS C     L  G Q+HA   K+    D  + + LI +YSKC+    A ++
Sbjct: 54  PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
                E D+V W+++I+G + N L   A M F +M    +   +F+F++VL +C+ +   
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G+QVH  +   G+  D+FV + L+ MY KC +   +++ FD +  +N V+WN +   Y
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV-EIFNSMQLDHGVEP 640
            Q  +  EAV L+ +M+ SG+KP++ +  +++ AC  +GL D    +I +   +  G + 
Sbjct: 234 VQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDW 291

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN--------VRL 692
                  ++D   + G   +A  + +++  + D V W  +++ C LH +         ++
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEHHEQALELLGQM 350

Query: 693 AKRAAEELFRLDPKNSAPYSL-LANIYSSLGRWDDLRAVRELMSENCIV 740
            ++    L ++D ++    S+ L ++YS     +D R    L+ E  ++
Sbjct: 351 KRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLI 399


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/780 (31%), Positives = 418/780 (53%), Gaps = 51/780 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   GK +H  ++  G     ++ N L++ Y K +  + A  +FD+MP +D+ SWN ++
Sbjct: 20  KALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRDVISWNTLI 79

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                  ++ FA  LFD MPER+VVSWN+L+S  + NG+  K++ ++ +M +      + 
Sbjct: 80  FGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYA 139

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T A + KA + + D   G + H L I++G + ++   +AL+ +Y+KC     A  VF EM
Sbjct: 140 TFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREM 199

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E N V ++A+++G  + DR +E L++F+ M++  + +   + +SV   CA         
Sbjct: 200 PERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCA--------- 250

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    S    G Q+H   +K  F  D  +  + LDMYAK   M  A  +F+ LP  
Sbjct: 251 -------GLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNP 303

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------ 349
              S+N +I GY ++ Q  KA+++ Q ++      DE++    L AC             
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLH 363

Query: 350 -----------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G +     +F+ M      SWNA+++++ Q+E   
Sbjct: 364 GLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIV 423

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           + + LF  M    ++PD  T   ++ +CA    L  G ++H   +K+   +D +V S L+
Sbjct: 424 KTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALV 483

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y KC     AE++  R+ E   V WNS+I+G S       A  +F QM +  + P  +
Sbjct: 484 DMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNY 543

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++ATVL  CA +++   G+Q+HAQI K    +D+++ S L++MY KCG++  +R  F+  
Sbjct: 544 TYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKA 603

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++ VTW+ MI  YA +G G++A+ L+++M    VKP+   F+++L AC+H G VD G+
Sbjct: 604 PKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGL 663

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
             F  M   +G++P ++HY+CM+D LGR+G  +EA  LI+ MP + D VIW  LLS+C++
Sbjct: 664 HYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKM 723

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             NV +A++A   L +LDP++S+ Y LLAN+Y+ +G W ++  +R +M    + K+P  S
Sbjct: 724 QGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCS 783



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 161/644 (25%), Positives = 304/644 (47%), Gaps = 61/644 (9%)

Query: 118 PTH-ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           PT  +T + + +  + L  +  G++ H  +I  G    IYVAN LL  Y K     +A  
Sbjct: 3   PTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFK 62

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VF+ M + + +++  ++ G A    +  A  +F  M  +    D VS +S+L      G 
Sbjct: 63  VFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPER----DVVSWNSLLSCYLHNGV 118

Query: 237 GVES-DVFAQSDN--------------KFSRNVH----GQQVHCLTIKLGFEADLHLSNS 277
             +S ++F +  +              K    +     G QVHCL I++GFE D+   ++
Sbjct: 119 NRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSA 178

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L+DMY+K   +D A  +F  +PER++V W+ +IAGY Q  +  + ++L + M   G    
Sbjct: 179 LVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVS 238

Query: 338 EVTSINMLVACVRSGDIKTGREM-----------------------------------FD 362
           + T  ++  +C      K G ++                                   F+
Sbjct: 239 QSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFN 298

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
           ++P+P   S+NA++  Y++ +   +A+ +F+ +Q   +  D  +L+  L++C+ +     
Sbjct: 299 TLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLE 358

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           G Q+H  ++K     +  VA+ ++ +Y KC     A  +F  +   D V WN++IA    
Sbjct: 359 GIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQ 418

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           N   ++    F  M ++ M P  F++ +V+ +CA   +   G ++H +I K G   D FV
Sbjct: 419 NEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFV 478

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
           GSAL++MY KCG +  A +    +  K TV+WN +I G++     + A R +  M+  G+
Sbjct: 479 GSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGI 538

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
            PD+ T+  +L  C++   +++G +I ++  L   +   +   + ++D   + G+  ++ 
Sbjct: 539 IPDNYTYATVLDVCANMATIELGKQI-HAQILKLQLHSDVYIASTLVDMYSKCGNMQDSR 597

Query: 663 MLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK 706
           ++ ++ P K D V W  ++ +   H     A    EE+  L+ K
Sbjct: 598 LMFEKAP-KRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVK 640



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 36/215 (16%)

Query: 501 MYPTQ-FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
           M PT+  +F+ +L  C+ L +   G+QVH Q+   G+V  I+V + L++ YCK   +  A
Sbjct: 1   MNPTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYA 60

Query: 560 RQFFDMMHGKNTVTWNEMIHGYA-------------------------------QNGYGD 588
            + FD M  ++ ++WN +I GYA                                NG   
Sbjct: 61  FKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNR 120

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI-FNSMQLDHGVEPILDHYTC 647
           +++ ++  M +  +  D  TF  IL AC  SG+ D G+ +  + + +  G E  +   + 
Sbjct: 121 KSIEIFVRMRSLKIPHDYATFAVILKAC--SGIEDYGLGLQVHCLAIQMGFENDVVTGSA 178

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           ++D   +     +A  +  EMP + + V W  +++
Sbjct: 179 LVDMYSKCKKLDDAFRVFREMP-ERNLVCWSAVIA 212


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/773 (33%), Positives = 419/773 (54%), Gaps = 84/773 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LHAH+++ G   D  L N L+ LYSKC                                 
Sbjct: 3   LHAHLIKFGFSRDPSLRNHLVTLYSKCRR------------------------------- 31

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
             +A KL DE  E +VVSW++L+S  V+NG  E+AL V+N+M   G      T  SV KA
Sbjct: 32  FGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKA 91

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            +   D+  GR+ HG+ +  G + + +VAN L+ +YAKCG    +  +F  + E N V++
Sbjct: 92  CSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSW 151

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV-ESDVFAQSDN 248
            A+ S   +++   EA+ +F+ M+R  +  +  S+S +L  CA    G+ E D+      
Sbjct: 152 NALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACA----GLQEGDL------ 201

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                  G+++H L +K+G + D   +N+L+DMY+K G+++ A  +F ++    VVSWN 
Sbjct: 202 -------GRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNA 254

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-------- 360
           +IAG      +  A+ LL  MK  G  P+  T  + L AC   G  + GR++        
Sbjct: 255 IIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMD 314

Query: 361 ---------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                      +DSMP   + +WNA++S YSQ  +H +A+ LF 
Sbjct: 315 AHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFS 374

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           +M    +  ++TTL+ +L S A++  ++  KQ+H  S+K+  + D YV + L+  Y KC 
Sbjct: 375 KMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCN 434

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
             + A ++F      D+V + SMI   S      EA   + QM+  ++ P  F  +++L+
Sbjct: 435 HIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLN 494

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           +CA LS+  QG+Q+H    K G++ DIF  ++L+ MY KCG I  A + F  +  +  V+
Sbjct: 495 ACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVS 554

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W+ MI GYAQ+G+G EA+RL+  M+  GV P+ IT V++L AC+H+GLV+ G + F  M+
Sbjct: 555 WSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKME 614

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
           +  G++P  +HY CMID LGR+G  +EA  L++ +P + D  +W  LL + R+H N+ L 
Sbjct: 615 VMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELG 674

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++AA+ LF L+P+ S  + LLANIY+S G W+++  VR+ M ++ + K+P  S
Sbjct: 675 QKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMS 727



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 269/561 (47%), Gaps = 82/561 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   +  G   D F+ N L+ +Y+KC     ++ LF  +  +++ SWNA+ S   +
Sbjct: 101 GRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQ 160

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S+    A  LF EM               VR+G+                +P   +++ +
Sbjct: 161 SELCGEAVGLFKEM---------------VRSGI----------------MPNEFSISII 189

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L + + GR+ HGL++K+GLD + + ANAL+ +Y+K G  + AV VF++++ P+ 
Sbjct: 190 LNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDV 249

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+++G    D    AL +   M       +  +LSS L  CA  G       F + 
Sbjct: 250 VSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG-------FKEL 302

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+Q+H   IK+   +DL  +  L+DMY+K   MD A   + ++P++ +++W
Sbjct: 303 ---------GRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAW 353

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT---------SINMLVAC-------VR 350
           N +I+GY Q      A+ L  +M S   + ++ T         S+  +  C       ++
Sbjct: 354 NALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIK 413

Query: 351 SG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
           SG                    I    ++F+      + ++ +M+++YSQ  + +EA+KL
Sbjct: 414 SGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKL 473

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           + +MQ   +KPD    + +L++CA +   E GKQ+H  ++K     D + ++ L+ +Y+K
Sbjct: 474 YLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAK 533

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E A+R F  IP   IV W++MI G + +    EA   F QM ++ + P   +  +V
Sbjct: 534 CGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSV 593

Query: 512 LSSCAKLSSSFQGRQVHAQIE 532
           L +C       +G+Q   ++E
Sbjct: 594 LCACNHAGLVNEGKQYFEKME 614



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 216/450 (48%), Gaps = 36/450 (8%)

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           ++H   IK GF  D  L N L+ +Y+K      A  +     E  VVSW+ +++GY Q  
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 318 QSTKAIELLQRM----------------KSC-------------------GFEPDEVTSI 342
              +A+ +   M                K+C                   GFE D   + 
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121

Query: 343 NMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
            ++V   + G +   R +F  +   +V SWNA+ S Y QSE   EA+ LF+EM   G+ P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           +  +++IIL++CA +   + G+++H   LK    +D + A+ L+ +YSK    E A  VF
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             I   D+V WN++IAG  L+  +  A M   +M+ +   P  F+ ++ L +CA +    
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            GRQ+H+ + K    +D+F    L++MY KC  +  AR+ +D M  K+ + WN +I GY+
Sbjct: 302 LGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYS 361

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           Q G   +AV L+  M +  +  +  T   +L + +    + V  +I +++ +  G+    
Sbjct: 362 QCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQI-HTISIKSGIYSDF 420

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
                ++D  G+  H  EA  + +E   +D
Sbjct: 421 YVINSLLDTYGKCNHIDEASKIFEERTWED 450



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 192/399 (48%), Gaps = 56/399 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS--AQ 64
           G+ LH+ +++     D F    L+++YSKC     A+  +D MP KDI +WNA++S  +Q
Sbjct: 303 GRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQ 362

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
           C  D L+                                A+S+++KM +E       TL+
Sbjct: 363 C-GDHLD--------------------------------AVSLFSKMFSEDIDFNQTTLS 389

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +V K+  +L  ++  ++ H + IK G+  + YV N+LL  Y KC     A  +FEE +  
Sbjct: 390 TVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWE 449

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V +T+M++  ++     EAL+++  M    +  D    SS+L  CA            
Sbjct: 450 DLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACA------------ 497

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 S    G+Q+H   IK GF  D+  SNSL++MYAK G ++ A+  FS +P R +V
Sbjct: 498 ----NLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIV 553

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SW+ MI GY Q     +A+ L  +M   G  P+ +T +++L AC  +G +  G++ F+ M
Sbjct: 554 SWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKM 613

Query: 365 P-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                  P+   +  M+    +S    EA++L   + F 
Sbjct: 614 EVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFE 652



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 181/360 (50%), Gaps = 2/360 (0%)

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
           +EL   +   GF  D     +++    +       R++ D      V SW+++LS Y Q+
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
              +EA+ +F EM   GVK +  T   +L +C+    L  G++VH  ++ T    D +VA
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + L+ +Y+KC   + + R+F  I E ++V WN++ +    + L  EA   FK+M ++ + 
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P +FS + +L++CA L     GR++H  + K G   D F  +AL++MY K G+I GA   
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F  +   + V+WN +I G   +   D A+ L  +M  SG +P+  T  + L AC+  G  
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           ++G ++ +S+ +       L     ++D   +     +A    D MP K D + W  L+S
Sbjct: 301 ELGRQLHSSL-IKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWNALIS 358



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 31/139 (22%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A+  GK LH H ++ G   D F  N L+ +Y+KC +   A   F ++P++ I SW+A   
Sbjct: 501 AYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSA--- 557

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                       +I    ++G  ++AL ++N+M  +G  P HIT
Sbjct: 558 ----------------------------MIGGYAQHGHGKEALRLFNQMLRDGVPPNHIT 589

Query: 123 LASVFKASTALLDVEHGRR 141
           L SV  A      V  G++
Sbjct: 590 LVSVLCACNHAGLVNEGKQ 608


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 266/796 (33%), Positives = 432/796 (54%), Gaps = 73/796 (9%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  HAH++ +G    TF+ N L+++Y+   +  SA  +FDKMP +D+ SWN +++   K
Sbjct: 67  GKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 126

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S+D+  A   F+ MP R+VVSWN+++S  ++NG   K++ V+  M  EG      T A +
Sbjct: 127 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 186

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K  + L D   G + HG+V+++G D ++  A+ALL +YAK      ++ VF+ + E N 
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++A+++G  + + +  AL+ F+ M +    +     +SVL  CA           A S
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA-----------ALS 295

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           + +      G Q+H   +K  F AD  +  + LDMYAK  +M  A+++F N    +  S+
Sbjct: 296 ELRL-----GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N MI GY Q+    KA+ L  R+ S G   DE++   +  AC     +  G ++      
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        FD M      SWNA+++++ Q+    E + L
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F  M    ++PD  T   IL +C   G L  G ++H++ +K+    ++ V   LI +YSK
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529

Query: 452 CQRNELAERVFHR----------IPELD----------IVCWNSMIAGLSLNSLDIEAFM 491
           C   E AE++  R          + EL+           V WNS+I+G  +     +A M
Sbjct: 530 CGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            F +M +  + P +F++ATVL +CA L+S+  G+Q+HAQ+ K    +D+++ S L++MY 
Sbjct: 590 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYS 649

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCGD++ +R  F+    ++ VTWN MI GYA +G G+EA++L++ MI   +KP+ +TF++
Sbjct: 650 KCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFIS 709

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           IL AC+H GL+D G+E F  M+ D+G++P L HY+ M+D LG++G    A  LI EMP +
Sbjct: 710 ILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFE 769

Query: 672 DDPVIWEVLLSSCRLHA-NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
            D VIW  LL  C +H  NV +A+ A   L RLDP++S+ Y+LL+N+Y+  G W+ +  +
Sbjct: 770 ADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDL 829

Query: 731 RELMSENCIVKDPAYS 746
           R  M    + K+P  S
Sbjct: 830 RRNMRGFKLKKEPGCS 845



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 34/294 (11%)

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
           T  + +   CA  G LE GKQ HA  + +      +V + L+ +Y+  +    A  VF +
Sbjct: 49  TNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 108

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM------RQNEMYPTQF------------ 506
           +P  D+V WN MI G S ++   +A  FF  M        N M                 
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168

Query: 507 -------------SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
                        +FA +L  C+ L  +  G Q+H  + + G   D+   SAL++MY K 
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
                + + F  +  KN+V+W+ +I G  QN     A++ +K+M           + ++L
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288

Query: 614 TACSHSGLVDVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
            +C+    + +G ++  ++++ D   + I+   T  +D   +  +  +A++L D
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVR--TATLDMYAKCDNMQDAQILFD 340



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 122/275 (44%), Gaps = 39/275 (14%)

Query: 487 IEAFMFFKQM--RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
           + +F +F     + N +  T FSF  V   CAK  +   G+Q HA +   G+    FV +
Sbjct: 30  VPSFSYFTDFLNQVNSVSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLN 87

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA---------------------- 582
            L+++Y    D   A   FD M  ++ V+WN+MI+GY+                      
Sbjct: 88  CLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVS 147

Query: 583 ---------QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
                    QNG   +++ ++ DM   G++ D  TF  IL  CS      +G++I + + 
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI-HGIV 206

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
           +  G +  +   + ++D   +   F E+  +   +P K + V W  +++ C  +  + LA
Sbjct: 207 VRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NSVSWSAIIAGCVQNNLLSLA 265

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLR 728
            +  +E+ +++   S   S+ A++  S     +LR
Sbjct: 266 LKFFKEMQKVNAGVSQ--SIYASVLRSCAALSELR 298


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 266/796 (33%), Positives = 432/796 (54%), Gaps = 73/796 (9%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  HAH++ +G    TF+ N L+++Y+   +  SA  +FDKMP +D+ SWN +++   K
Sbjct: 25  GKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 84

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S+D+  A   F+ MP R+VVSWN+++S  ++NG   K++ V+  M  EG      T A +
Sbjct: 85  SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 144

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K  + L D   G + HG+V+++G D ++  A+ALL +YAK      ++ VF+ + E N 
Sbjct: 145 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 204

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++A+++G  + + +  AL+ F+ M +    +     +SVL  CA           A S
Sbjct: 205 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA-----------ALS 253

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           + +      G Q+H   +K  F AD  +  + LDMYAK  +M  A+++F N    +  S+
Sbjct: 254 ELRL-----GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 308

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N MI GY Q+    KA+ L  R+ S G   DE++   +  AC     +  G ++      
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 368

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        FD M      SWNA+++++ Q+    E + L
Sbjct: 369 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 428

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F  M    ++PD  T   IL +C   G L  G ++H++ +K+    ++ V   LI +YSK
Sbjct: 429 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 487

Query: 452 CQRNELAERVFHR----------IPELD----------IVCWNSMIAGLSLNSLDIEAFM 491
           C   E AE++  R          + EL+           V WNS+I+G  +     +A M
Sbjct: 488 CGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 547

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            F +M +  + P +F++ATVL +CA L+S+  G+Q+HAQ+ K    +D+++ S L++MY 
Sbjct: 548 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYS 607

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCGD++ +R  F+    ++ VTWN MI GYA +G G+EA++L++ MI   +KP+ +TF++
Sbjct: 608 KCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFIS 667

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           IL AC+H GL+D G+E F  M+ D+G++P L HY+ M+D LG++G    A  LI EMP +
Sbjct: 668 ILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFE 727

Query: 672 DDPVIWEVLLSSCRLHA-NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
            D VIW  LL  C +H  NV +A+ A   L RLDP++S+ Y+LL+N+Y+  G W+ +  +
Sbjct: 728 ADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDL 787

Query: 731 RELMSENCIVKDPAYS 746
           R  M    + K+P  S
Sbjct: 788 RRNMRGFKLKKEPGCS 803



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 125/285 (43%), Gaps = 34/285 (11%)

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           CA  G LE GKQ HA  + +      +V + L+ +Y+  +    A  VF ++P  D+V W
Sbjct: 16  CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75

Query: 474 NSMIAGLSLNSLDIEAFMFFKQM------RQNEMYPTQF--------------------- 506
           N MI G S ++   +A  FF  M        N M                          
Sbjct: 76  NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135

Query: 507 ----SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
               +FA +L  C+ L  +  G Q+H  + + G   D+   SAL++MY K      + + 
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F  +  KN+V+W+ +I G  QN     A++ +K+M           + ++L +C+    +
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 623 DVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
            +G ++  ++++ D   + I+   T  +D   +  +  +A++L D
Sbjct: 256 RLGGQLHAHALKSDFAADGIVR--TATLDMYAKCDNMQDAQILFD 298


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/813 (31%), Positives = 439/813 (53%), Gaps = 89/813 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +L++G     F    L+++Y+KC     A+ +FD +   D   W ++++   +
Sbjct: 179 GRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHR 238

Query: 67  SDDLEFAYKLFDEM------PER-----------------------------NVVSWNNL 91
               + A  LF  M      P++                             + V+WN +
Sbjct: 239 VGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAV 298

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           IS+  ++GLE +   +Y  M  +G +PT  T AS+  A+ ++   + G++ H   +K GL
Sbjct: 299 ISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGL 358

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D N++V ++L++LY K G    A  VF+  +E N V + AM+ G  + D   E ++MF+ 
Sbjct: 359 DANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQY 418

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M R  +  D  +  SVLG C                N  S ++ G+QVHC+TIK   +AD
Sbjct: 419 MRRADLEADDFTFVSVLGACI---------------NLDSLDI-GRQVHCITIKNSMDAD 462

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L ++N++LDMY+K G +D A+ +FS +P +  VSWN +I G     +  +A+ +L+RMK 
Sbjct: 463 LFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKC 522

Query: 332 CGFEPDEVTSINMLVAC--VRS---------------------------------GDIKT 356
            G  PDEV+    + AC  +R+                                 GD+++
Sbjct: 523 YGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVES 582

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R++   + + S+   NA+++   Q+    EAI+LF+++   G KP   T A ILS C  
Sbjct: 583 SRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTG 642

Query: 417 MGILESGKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERVFHRIPE-LDIVCWN 474
                 GKQVH+ +LK+A  + D  +   L+GIY KC+  E A ++   +P+  ++V W 
Sbjct: 643 PVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWT 702

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           + I+G + N    ++ + F +MR +++   + +FA+VL +C+++++   G+++H  I K 
Sbjct: 703 ATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKS 762

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAVRL 593
           G+V+     SAL++MY KCGD+  + + F  +  K N + WN MI G+A+NGY +EA+ L
Sbjct: 763 GFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLL 822

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           ++ M  S +KPD++T + +L ACSH+GL+  G  +F+SM   +G+ P +DHY C+ID LG
Sbjct: 823 FQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLG 882

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           R GH  EA+ +ID++P + D VIW   L++C++H +    K AA++L  ++P+ S+ Y  
Sbjct: 883 RGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVF 942

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L++++++ G W + +  RE M E  ++K P  S
Sbjct: 943 LSSLHAAAGNWVEAKVAREAMREKGVMKFPGCS 975



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 187/761 (24%), Positives = 344/761 (45%), Gaps = 118/761 (15%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           +LHA +LR GL     L + L++LY +                   Y+W A+    C   
Sbjct: 77  VLHARVLRLGLPLRGRLGDALVDLYGRSGRVG--------------YAWRAL--GCCTGA 120

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITLASVF 127
                          +  + ++++S   R+G     L  + ++  + G  P    LA V 
Sbjct: 121 -------------PASGAAASSVLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVL 167

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A + L  +E GR+ H  V+K G   + +    L+ +YAKC   K A  VF+ ++ P+ +
Sbjct: 168 SACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTI 227

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG------------ 235
            + +M++G  +  R  +AL +F  M +   + D V+  +++   A  G            
Sbjct: 228 CWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRI 287

Query: 236 -----------------CGVESDVFA-----------QSDNKFSRNV----------HGQ 257
                             G+ES+VF             + + F+  +           GQ
Sbjct: 288 QMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQ 347

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           Q+H   +K G +A++ + +SL+++Y K+G +  A+ +F    E+++V WN M+ G+ Q  
Sbjct: 348 QIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQND 407

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------------------- 349
              + I++ Q M+    E D+ T +++L AC+                            
Sbjct: 408 LQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVAN 467

Query: 350 -------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                  + G I   + +F  +P     SWNA++   + +E  +EA+ + + M+  G+ P
Sbjct: 468 AMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAP 527

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  + A  +++C+ +   E+GKQ+H AS+K     ++ V S LI +YSK    E + +V 
Sbjct: 528 DEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVL 587

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             +    +V  N++I GL  N+ + EA   F+Q+ ++   P+ F+FA++LS C    SS 
Sbjct: 588 AHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSV 647

Query: 523 QGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEMIHG 580
            G+QVH+   K   +N D  +G +L+ +Y KC  +  A +   ++   KN V W   I G
Sbjct: 648 IGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISG 707

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           YAQNGY D+++ ++  M +  V+ D+ TF ++L ACS    +  G EI + + +  G   
Sbjct: 708 YAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEI-HGLIIKSGFVS 766

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
                + ++D   + G    +  +  E+  K + + W  ++
Sbjct: 767 YETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMI 807



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 157/497 (31%), Positives = 256/497 (51%), Gaps = 22/497 (4%)

Query: 138 HGRRC---HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE--EMSEPNEVTFTAM 192
             R C   H  V+++GL     + +AL+ LY + G   +A         +  +    +++
Sbjct: 71  QARACGVLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSV 130

Query: 193 MSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           +S  A++    + L+ F RL      + D   L+ VL  C+R G  +E            
Sbjct: 131 LSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLG-ALE------------ 177

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G+QVHC  +K GF +       L+DMYAK  ++  A  +F  +     + W  MIA
Sbjct: 178 ---QGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIA 234

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSS 371
           GY +  +  +A+ L  RM+  G  PD+VT + ++      G +   R +   +  PS  +
Sbjct: 235 GYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVA 294

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           WNA++SSYSQS    E   L+++M+ +G+ P R+T A +LS+ A+M   + G+Q+HAA++
Sbjct: 295 WNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAV 354

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           K     + +V S LI +Y K      A++VF    E +IV WN+M+ G   N L  E   
Sbjct: 355 KHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQ 414

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            F+ MR+ ++    F+F +VL +C  L S   GRQVH    K+    D+FV +A+++MY 
Sbjct: 415 MFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYS 474

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           K G I  A+  F ++ GK++V+WN +I G A N   +EAV + K M   G+ PD+++F  
Sbjct: 475 KLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFAT 534

Query: 612 ILTACSHSGLVDVGVEI 628
            + ACS+    + G +I
Sbjct: 535 AINACSNIRATETGKQI 551



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 209/431 (48%), Gaps = 58/431 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   GK +H   ++  +  +  + + LI+LYSK                          
Sbjct: 543 RATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFG------------------------ 578

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                  D+E + K+   +   ++V  N LI+ LV+N  E++A+ ++ ++  +GF P++ 
Sbjct: 579 -------DVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNF 631

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           T AS+    T  +    G++ H   +K   L+++  +  +L+ +Y KC   + A  +  E
Sbjct: 632 TFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAE 691

Query: 181 MSE-PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           + +  N V +TA +SG A+     ++L MF  M    V  D  + +SVL  C        
Sbjct: 692 VPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKAC-------- 743

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           S++ A +D        G+++H L IK GF +    +++L+DMY+K GD+ S+  IF  L 
Sbjct: 744 SEIAALTD--------GKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELK 795

Query: 300 -ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
            +++++ WN MI G+ +   + +A+ L Q+M+    +PDEVT + +L+AC  +G I  GR
Sbjct: 796 NKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGR 855

Query: 359 EMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
            +FDSM       P V  +  ++    +  + +EA ++  ++ FR    D    A  L++
Sbjct: 856 NLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRA---DGVIWATFLAA 912

Query: 414 CAAMGILESGK 424
           C      E GK
Sbjct: 913 CQMHKDEERGK 923


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/813 (30%), Positives = 437/813 (53%), Gaps = 89/813 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +L++G     F    L+++Y+KC     A+ +FD +   D   W ++++   +
Sbjct: 176 GRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHR 235

Query: 67  SDDLEFAYKLFDEM------PER-----------------------------NVVSWNNL 91
               + A  LF  M      P++                             + V+WN +
Sbjct: 236 VGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAV 295

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           I++  ++GL+ +   +Y  M  +G +PT  T AS+  A+  +   + GR+ H   +K GL
Sbjct: 296 IASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGL 355

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D N++V ++L++LY K G    A  VF+  +E N V + A++ G  + +   E ++MF+ 
Sbjct: 356 DANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQY 415

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M R  +  D  +  SVLG C                N +S ++ G+QVHC+TIK G +AD
Sbjct: 416 MRRADLEADDFTFVSVLGACI---------------NLYSLDL-GRQVHCITIKNGMDAD 459

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L ++N++LDMY+K G +D A+ +FS +P +  VSWN +I G     +  +AI +L+RMK 
Sbjct: 460 LFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKF 519

Query: 332 CGFEPDEVTSINMLVACV-----------------------------------RSGDIKT 356
            G   DEV+    + AC                                    + GD+++
Sbjct: 520 YGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVES 579

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R++   + + S+   NA+++   Q+    EAI+LF+++   G KP   T   ILS C  
Sbjct: 580 SRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTR 639

Query: 417 MGILESGKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERVFHRIPE-LDIVCWN 474
                 GKQVH  +LK+A  + D  +   L+GIY KC+  E A ++   +P+  ++V W 
Sbjct: 640 PVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWT 699

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           + I+G + N   +++ + F +MR  ++   + +F +VL +C+++++   G+++H  I K 
Sbjct: 700 ATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKS 759

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
           G+V+     SAL++MY KCGD+  + + F ++ + +N + WN MI G+A+NGY +EA+ L
Sbjct: 760 GFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLL 819

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           ++ M  S +KPDD+T + +L ACSH+GL+  G+  F+SM   +G+ P +DHY C+ID LG
Sbjct: 820 FQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLG 879

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           R GH  +A+ +ID++P + D VIW   L++C++H +    K AA++L  ++P++S+ Y  
Sbjct: 880 RGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVF 939

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L++++++ G W + +  RE M E  ++K P  S
Sbjct: 940 LSSLHAAAGNWVEAKVAREAMREKGVMKFPGCS 972



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 184/761 (24%), Positives = 344/761 (45%), Gaps = 118/761 (15%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           +LHA ILR GL     L + L++LY +                   Y+W A+  A C   
Sbjct: 74  VLHARILRLGLPLRGRLGDALVDLYGRSGRVG--------------YAWRAL--ACCTG- 116

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITLASVF 127
                          +  + ++++S   R+G     L  + ++  + G  P    +A V 
Sbjct: 117 ------------APASSAAASSVLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVL 164

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A + L  +EHGR+ H  V+K G   +++    L+ +YAKCG    A  +F+ ++ P+ +
Sbjct: 165 SACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTI 224

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG------------ 235
            +T+M++G  +  R  +AL +F  M +     D V+  +++   A  G            
Sbjct: 225 CWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRI 284

Query: 236 -----------------CGVESDVFAQSDNKFSRNV---------------------HGQ 257
                             G++S+VF    +   + +                      G+
Sbjct: 285 RMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGR 344

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           Q+H   +K G +A++ + +SL+++Y K+G +  A+ +F    E+++V WN ++ G+ Q  
Sbjct: 345 QIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNE 404

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------------------- 349
              + I++ Q M+    E D+ T +++L AC+                            
Sbjct: 405 LQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVAN 464

Query: 350 -------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                  + G I   + +F  +P     SWNA++   + +E   EAI + + M+F G+  
Sbjct: 465 AMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIAL 524

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  + A  +++C+ +  +E+GKQ+H+AS+K     ++ V S LI +YSK    E + +V 
Sbjct: 525 DEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVL 584

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             +    IV  N++I GL  N+ + EA   F+Q+ ++   P+ F+F ++LS C +  SS 
Sbjct: 585 AHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSV 644

Query: 523 QGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHG-KNTVTWNEMIHG 580
            G+QVH    K   +N D  +G +L+ +Y KC  +  A +  + +   KN V W   I G
Sbjct: 645 IGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISG 704

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           YAQNGY  +++ ++  M +  V+ D+ TF ++L ACS    +  G EI + + +  G   
Sbjct: 705 YAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEI-HGLIVKSGFVS 763

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
                + ++D   + G    +  +  E+  + + + W  ++
Sbjct: 764 YETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMI 804



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/500 (30%), Positives = 258/500 (51%), Gaps = 22/500 (4%)

Query: 138 HGRRC---HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE--EMSEPNEVTFTAM 192
             R C   H  ++++GL     + +AL+ LY + G   +A         +  +    +++
Sbjct: 68  QARACGVLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSV 127

Query: 193 MSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           +S  A++    + L+ F R+      + D   ++ VL  C+R G  +E            
Sbjct: 128 LSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLG-ALE------------ 174

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
              HG+QVHC  +K GF + +     L+DMYAK G++D A  +F  +     + W  MIA
Sbjct: 175 ---HGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIA 231

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSS 371
           GY +  +  +A+ L  RM+  G  PD+VT + ++      G +   R +   +   S  +
Sbjct: 232 GYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVA 291

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           WNA+++SYSQS    E   L+++M+ +G+ P R+T A ILS+ A M   + G+Q+HA ++
Sbjct: 292 WNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAV 351

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           K     + +V S LI +Y K      A++VF    E +IV WN+++ G   N L  E   
Sbjct: 352 KHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQ 411

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            F+ MR+ ++    F+F +VL +C  L S   GRQVH    K+G   D+FV +A+++MY 
Sbjct: 412 MFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYS 471

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           K G I  A+  F ++  K++V+WN +I G A N    EA+ + K M   G+  D+++F  
Sbjct: 472 KLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFAT 531

Query: 612 ILTACSHSGLVDVGVEIFNS 631
            + ACS+   ++ G +I ++
Sbjct: 532 AINACSNIWAIETGKQIHSA 551


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/729 (33%), Positives = 400/729 (54%), Gaps = 51/729 (6%)

Query: 53   DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
            DI    A+ +   +  D+  A +  +   +R+VV +N LI+AL ++G  E+A   Y +M 
Sbjct: 318  DIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMR 377

Query: 113  NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            ++G V    T  SV  A +    +  G   H  + ++G   ++ + N+L+S+YA+CG   
Sbjct: 378  SDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLP 437

Query: 173  HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
             A  +F  M + + +++ A+++G A+ +   EA+++++ M  + V    V+   +L  C 
Sbjct: 438  RARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSAC- 496

Query: 233  REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                   ++  A SD        G+ +H   ++ G +++ HL+N+L++MY + G +  A+
Sbjct: 497  -------TNSSAYSD--------GKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQ 541

Query: 293  VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---- 348
             +F     R ++SWN MIAG+ Q      A +L   MK  G EPD++T  ++LV C    
Sbjct: 542  NVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPE 601

Query: 349  -------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                                           +R G ++   E+F S+   +V SW AM+ 
Sbjct: 602  ALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIG 661

Query: 378  SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
             ++     ++A +LF +MQ  G KP ++T + IL +C +   L+ GK+V A  L +   +
Sbjct: 662  GFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYEL 721

Query: 438  DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
            D  V + LI  YSK      A +VF ++P  DI+ WN MIAG + N L   A  F  QM+
Sbjct: 722  DTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQ 781

Query: 498  QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
            +  +   +FSF ++L++C+  S+  +G++VHA+I K     D+ VG+ALI MY KCG + 
Sbjct: 782  EQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLE 841

Query: 558  GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
             A++ FD    KN VTWN MI+ YAQ+G   +A+  +  M   G+KPD  TF +IL+AC+
Sbjct: 842  EAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACN 901

Query: 618  HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
            HSGLV  G  IF+S++  HG+ P ++HY C++  LGRAG F EAE LI++MP   D  +W
Sbjct: 902  HSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVW 961

Query: 678  EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
            E LL +CR+H NV LA+ AA    +L+ +N A Y LL+N+Y++ GRWDD+  +R +M   
Sbjct: 962  ETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGR 1021

Query: 738  CIVKDPAYS 746
             I K+P  S
Sbjct: 1022 GIRKEPGRS 1030



 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 197/707 (27%), Positives = 335/707 (47%), Gaps = 83/707 (11%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           K++    K +HA ++  G+  D FL N LI +Y KC +   A  +F KMP +D+ SWN++
Sbjct: 95  KRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSL 154

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +S   +    + A++LF+E                               M   GF+P+ 
Sbjct: 155 ISCYAQQGFKKKAFQLFEE-------------------------------MQTAGFIPSK 183

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           IT  S+  A  +  ++E+G++ H  +I+ G  ++  V N+LL++Y KC     A  VF  
Sbjct: 184 ITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSG 243

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           +   + V++  M+   A+   V E + +F  M  + +  D V+  ++L            
Sbjct: 244 IYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLL------------ 291

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           D F       S    G+++H L +  G  +D+ +  +L  M+ + GD+  A+       +
Sbjct: 292 DAFTTP----SMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFAD 347

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------ 348
           R VV +N +IA   Q     +A E   +M+S G   +  T +++L AC            
Sbjct: 348 RDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELI 407

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   R GD+   RE+F++MP   + SWNA+++ Y++ E+ 
Sbjct: 408 HSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDR 467

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            EA+KL+++MQ  GVKP R T   +LS+C        GK +H   L++    + ++A+ L
Sbjct: 468 GEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANAL 527

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y +C     A+ VF      DI+ WNSMIAG + +     A+  F +M++  + P +
Sbjct: 528 MNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDK 587

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +FA+VL  C    +   GRQ+H  I + G   D+ +G+ALI MY +CG +  A + F  
Sbjct: 588 ITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHS 647

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  +N ++W  MI G+A  G   +A  L+  M   G KP   TF +IL AC  S  +D G
Sbjct: 648 LRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEG 707

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
            ++   + L+ G E        +I    ++G   +A  + D+MP +D
Sbjct: 708 KKVIAHI-LNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRD 753



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 157/566 (27%), Positives = 278/566 (49%), Gaps = 82/566 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA  AG+L+H+HI   G   D  + N LI +Y++C                         
Sbjct: 399 KALGAGELIHSHISEVGHSSDVQIGNSLISMYARCG------------------------ 434

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                  DL  A +LF+ MP+R+++SWN +I+   R     +A+ +Y +M +EG  P  +
Sbjct: 435 -------DLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRV 487

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T   +  A T       G+  H  +++ G+  N ++ANAL+++Y +CG    A  VFE  
Sbjct: 488 TFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGT 547

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + +++ +M++G A+      A ++F  M ++ +  D ++ +SVL  C          
Sbjct: 548 RARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGC---------- 597

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                 N  +  + G+Q+H L I+ G + D++L N+L++MY + G +  A  +F +L  R
Sbjct: 598 -----KNPEALEL-GRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR 651

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------ 349
           +V+SW  MI G+  + +  KA EL  +M++ GF+P + T  ++L AC+            
Sbjct: 652 NVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVI 711

Query: 350 -----------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  +SG +   R++FD MP+  + SWN M++ Y+Q+    
Sbjct: 712 AHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGG 771

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
            A++   +MQ +GV  ++ +   IL++C++   LE GK+VHA  +K     D  V + LI
Sbjct: 772 TALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALI 831

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y+KC   E A+ VF    E ++V WN+MI   + + L  +A  FF  M +  + P   
Sbjct: 832 SMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGS 891

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIE 532
           +F ++LS+C       +G ++ + +E
Sbjct: 892 TFTSILSACNHSGLVMEGNRIFSSLE 917



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 248/486 (51%), Gaps = 39/486 (8%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +++H   ++ G   D+ LSN L++MY K   +  A  +F  +P R V+SWN +I+ Y Q+
Sbjct: 102 KRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQ 161

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VRSG-------- 352
               KA +L + M++ GF P ++T I++L AC                + +G        
Sbjct: 162 GFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQ 221

Query: 353 -----------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                      D+ + R++F  +    V S+N ML  Y+Q    +E I LF +M   G+ 
Sbjct: 222 NSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIP 281

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           PD+ T   +L +     +L+ GK++H  ++    + D  V + L  ++ +C     A++ 
Sbjct: 282 PDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQA 341

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
                + D+V +N++IA L+ +    EAF  + QMR + +   + ++ +VL++C+   + 
Sbjct: 342 LEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKAL 401

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G  +H+ I + G+ +D+ +G++LI MY +CGD+  AR+ F+ M  ++ ++WN +I GY
Sbjct: 402 GAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGY 461

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           A+     EA++LYK M + GVKP  +TF+ +L+AC++S     G  I   + L  G++  
Sbjct: 462 ARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDI-LRSGIKSN 520

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
                 +++   R G   EA+ + +    + D + W  +++    H +   A +   E+ 
Sbjct: 521 GHLANALMNMYRRCGSIMEAQNVFEGTRAR-DIISWNSMIAGHAQHGSYEAAYKLFLEMK 579

Query: 702 R--LDP 705
           +  L+P
Sbjct: 580 KEGLEP 585



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 219/479 (45%), Gaps = 24/479 (5%)

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           M+R + R  +   + SL  V GVC           +    N+ S    G          G
Sbjct: 1   MYRCLWRSVIRTHTGSLRRVAGVCE-----FSVRPWPAEQNRSSTGAAG----------G 45

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVSWNVMIAGYGQKYQSTKAIELL 326
             ++L     + D   +  + +     +   P E +  ++  ++    +K    +A  + 
Sbjct: 46  ASSNLVSVKVMRDEQHRGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIH 105

Query: 327 QRMKSCGFEPDEVTS---INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
            +M   G  PD   S   INM V C    D     ++F  MP   V SWN+++S Y+Q  
Sbjct: 106 AQMVEAGVGPDIFLSNLLINMYVKCRSVSD---AHQVFLKMPRRDVISWNSLISCYAQQG 162

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
             K+A +LF EMQ  G  P + T   IL++C +   LE GK++H+  ++     D  V +
Sbjct: 163 FKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN 222

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            L+ +Y KC+    A +VF  I   D+V +N+M+   +  +   E    F QM    + P
Sbjct: 223 SLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPP 282

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            + ++  +L +    S   +G+++H     +G  +DI VG+AL  M+ +CGD+ GA+Q  
Sbjct: 283 DKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQAL 342

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           +    ++ V +N +I   AQ+G+ +EA   Y  M + GV  +  T++++L ACS S  + 
Sbjct: 343 EAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALG 402

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            G E+ +S   + G    +     +I    R G    A  L + MP K D + W  +++
Sbjct: 403 AG-ELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMP-KRDLISWNAIIA 459



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 125/238 (52%), Gaps = 1/238 (0%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
           H+ +     D    NA++SA  KS  +  A K+FD+MP R+++SWN +I+   +NGL   
Sbjct: 713 HILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGT 772

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           AL    +M  +G V    +  S+  A ++   +E G+R H  ++K  +  ++ V  AL+S
Sbjct: 773 ALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALIS 832

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +YAKCG  + A  VF+  +E N VT+ AM++  A+     +AL+ F  M ++ +  D  +
Sbjct: 833 MYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGST 892

Query: 224 LSSVLGVCAREGCGVESD-VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
            +S+L  C   G  +E + +F+  +++   +   +   CL   LG       + +L++
Sbjct: 893 FTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLIN 950


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 271/816 (33%), Positives = 427/816 (52%), Gaps = 93/816 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDK--MPHKDIYSWNAILSAQ 64
           G+ +H+ ++++GL   +F    LI LY+KCN+   A+ +F     PH    SW A++S  
Sbjct: 66  GRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGY 125

Query: 65  CKSDDLEFAYKLFDEM------------------------------------PERNVVSW 88
            ++     A  +FD+M                                    P RNVV+W
Sbjct: 126 VQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAW 185

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           N +IS   +    E+AL+ +++MS  G   +  TLASV  A  +L  + HG   H   IK
Sbjct: 186 NVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIK 245

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
            G + +IYVA++L+++Y KC     A  VF+ +S+ N + + AM+   ++   +   +E+
Sbjct: 246 QGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMEL 305

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
           F  MI   +  D  + +S+L  CA   C    +V             G+Q+H   IK  F
Sbjct: 306 FLDMISCGIHPDEFTYTSILSTCA---CFEYLEV-------------GRQLHSAIIKKRF 349

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
            ++L ++N+L+DMYAK G +  A   F ++  R  +SWN +I GY Q+     A  L +R
Sbjct: 350 TSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRR 409

Query: 329 MKSCGFEPDEVTSINMLVAC-----------------------------------VRSGD 353
           M   G  PDEV+  ++L AC                                    + GD
Sbjct: 410 MILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGD 469

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           IK   + + SMP  SV S NA+++ Y+  +N KE+I L  EMQ  G+KP   T A ++  
Sbjct: 470 IKDAHKTYSSMPERSVVSVNALIAGYAL-KNTKESINLLHEMQILGLKPSEITFASLIDV 528

Query: 414 CAAMGILESGKQVHAASLKTASHIDN-YVASGLIGIYSKCQRNELAERVFHRIPEL-DIV 471
           C     +  G Q+H A +K      + ++ + L+G+Y   QR   A  +F     L  IV
Sbjct: 529 CKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIV 588

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
            W ++I+G   N     A   +++MR N + P Q +F TVL +CA LSS   GR++H+ I
Sbjct: 589 MWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLI 648

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD-MMHGKNTVTWNEMIHGYAQNGYGDEA 590
              G+  D    SAL++MY KCGD+  + Q F+ +   K+ ++WN MI G+A+NGY   A
Sbjct: 649 FHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCA 708

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           ++++ +M  S + PDD+TF+ +LTACSH+G V  G +IF+ M   +G+EP +DHY CM+D
Sbjct: 709 LKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVD 768

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            LGR G   EAE  ID++  + + +IW  LL +CR+H + +  +RAA++L  L+P++S+P
Sbjct: 769 LLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSP 828

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y LL+N+Y++ G WD+ R++R  M +  I K P  S
Sbjct: 829 YVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCS 864



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 134/423 (31%), Positives = 232/423 (54%), Gaps = 7/423 (1%)

Query: 252 RNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN--LPERSVVSWNV 308
           +N+H G+ VH   IK G E+      +L+ +YAK   +  A  IF++   P    VSW  
Sbjct: 61  QNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTA 120

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSP- 367
           +I+GY Q     +A+ +  +M++    PD+V  + +L A +  G +    ++F  MP P 
Sbjct: 121 LISGYVQAGLPHEALHIFDKMRNSAV-PDQVALVTVLNAYISLGKLDDACQLFQQMPIPI 179

Query: 368 -SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
            +V +WN M+S ++++ +++EA+  F +M   GVK  R+TLA +LS+ A++  L  G  V
Sbjct: 180 RNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLV 239

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           HA ++K       YVAS LI +Y KCQ  + A +VF  I + +++ WN+M+   S N   
Sbjct: 240 HAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFL 299

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
                 F  M    ++P +F++ ++LS+CA       GRQ+H+ I K  + +++FV +AL
Sbjct: 300 SNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNAL 359

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           I+MY K G +  A + F+ M  ++ ++WN +I GY Q      A  L++ MI  G+ PD+
Sbjct: 360 IDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDE 419

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           ++  +IL+AC +  +++ G + F+ + +  G+E  L   + +ID   + G   +A     
Sbjct: 420 VSLASILSACGNIKVLEAGQQ-FHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYS 478

Query: 667 EMP 669
            MP
Sbjct: 479 SMP 481



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 164/583 (28%), Positives = 259/583 (44%), Gaps = 93/583 (15%)

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
           V  WN  +    ++   E+ L  Y    N G  P   T A    A   L ++  GR  H 
Sbjct: 13  VRQWNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP--NEVTFTAMMSGLAKTDRV 202
            VIK GL+   +   AL+ LYAKC     A  +F     P  + V++TA++SG  +    
Sbjct: 72  CVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            EAL +F  M   AV  D V+L +VL                                  
Sbjct: 132 HEALHIFDKMRNSAVP-DQVALVTVL---------------------------------- 156

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL--PERSVVSWNVMIAGYGQKYQST 320
                            + Y   G +D A  +F  +  P R+VV+WNVMI+G+ +     
Sbjct: 157 -----------------NAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYE 199

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGDIKTG------------ 357
           +A+    +M   G +    T  ++L A            V +  IK G            
Sbjct: 200 EALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLI 259

Query: 358 ------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                       R++FD++   ++  WNAML  YSQ+      ++LF +M   G+ PD  
Sbjct: 260 NMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEF 319

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T   ILS+CA    LE G+Q+H+A +K     + +V + LI +Y+K    + A + F  +
Sbjct: 320 TYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHM 379

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
              D + WN++I G     ++  AF  F++M  + + P + S A++LS+C  +     G+
Sbjct: 380 TYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQ 439

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           Q H    K G   ++F GS+LI+MY KCGDI  A + +  M  ++ V+ N +I GYA   
Sbjct: 440 QFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN 499

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
              E++ L  +M   G+KP +ITF +++  C  S  V +G++I
Sbjct: 500 -TKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQI 541



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 189/418 (45%), Gaps = 78/418 (18%)

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRS 351
           V  WN  + G  + Y S + ++      + G  PD+ T    L AC           V S
Sbjct: 13  VRQWNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71

Query: 352 GDIKTG------------------------REMFDSMPSPSVS--SWNAMLSSYSQSENH 385
             IK+G                        R +F S P P +   SW A++S Y Q+   
Sbjct: 72  CVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            EA+ +F +M+   V PD+  L  +L++  ++G L+                        
Sbjct: 132 HEALHIFDKMRNSAV-PDQVALVTVLNAYISLGKLDDA---------------------- 168

Query: 446 IGIYSKCQRNELAERVFHR--IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
                 CQ       +F +  IP  ++V WN MI+G +  +   EA  FF QM ++ +  
Sbjct: 169 ------CQ-------LFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKS 215

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
           ++ + A+VLS+ A L++   G  VHA   K G+ + I+V S+LI MY KC     ARQ F
Sbjct: 216 SRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVF 275

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D +  KN + WN M+  Y+QNG+    + L+ DMI+ G+ PD+ T+ +IL+ C+    ++
Sbjct: 276 DAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLE 335

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           VG ++ +++        +  +   +ID   +AG   EA    + M  +D  + W  ++
Sbjct: 336 VGRQLHSAIIKKRFTSNLFVN-NALIDMYAKAGALKEAGKHFEHMTYRDH-ISWNAII 391



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 195/429 (45%), Gaps = 61/429 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+  H   ++ GL  + F  + LI++YSKC +   A   +  MP               
Sbjct: 437 AGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMP--------------- 481

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                           ER+VVS N LI+       +E ++++ ++M   G  P+ IT AS
Sbjct: 482 ----------------ERSVVSVNALIAGYALKNTKE-SINLLHEMQILGLKPSEITFAS 524

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +         V  G + H  ++K GL   + ++  +LL +Y        A  +F E S  
Sbjct: 525 LIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSL 584

Query: 185 NE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
              V +TA++SG  + +    AL ++R M    +S D  +  +VL  CA           
Sbjct: 585 KSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACA----------- 633

Query: 244 AQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
                    ++H G+++H L    GF+ D   S++L+DMYAK GD+ S+  +F  L  ++
Sbjct: 634 ------LLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKK 687

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
            V+SWN MI G+ +   +  A+++   M      PD+VT + +L AC  +G +  GR++F
Sbjct: 688 DVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIF 747

Query: 362 DSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           D M +     P V  +  M+    +    KEA +   +++   V+P+    A +L +C  
Sbjct: 748 DVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLE---VEPNAMIWANLLGACRI 804

Query: 417 MGILESGKQ 425
            G  + G++
Sbjct: 805 HGDEKRGQR 813


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/775 (31%), Positives = 417/775 (53%), Gaps = 83/775 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ ++ HI ++G+  D F+ N LI +Y+KC NT SA+                       
Sbjct: 129 GERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAK----------------------- 165

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++FD+M E++V SWN L+   V++GL E+A  ++ +M  +   P   T  S+
Sbjct: 166 --------QIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSM 217

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A     +V+ GR  + L++K G D +++V  AL++++ KCG    A  VF+ +   + 
Sbjct: 218 LNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDL 277

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+T+M++GLA+  R  +A  +F+ M  + V  D V+  S+L  C               
Sbjct: 278 VTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRAC--------------- 322

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            N       G++VH    ++G++ ++++  ++L MY K G M+ A  +F  +  R+VVSW
Sbjct: 323 -NHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSW 381

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
             MIAG+ Q  +  +A     +M   G EP+ VT +++L AC                  
Sbjct: 382 TAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIE 441

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G +K    +F+ +   +V +WNAM+++Y Q E +  A+  
Sbjct: 442 AGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALAT 501

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+ +   G+KP+ +T   IL+ C +   LE GK VH   +K     D +V++ L+ ++  
Sbjct: 502 FQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVN 561

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     A+ +F+ +P+ D+V WN++IAG   +  +  AF +FK M+++ + P + +F  +
Sbjct: 562 CGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGL 621

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L++CA   +  +GR++HA I +  +  D+ VG+ LI MY KCG I  A Q F  +  KN 
Sbjct: 622 LNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNV 681

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
            +W  MI GYAQ+G G EA+ L+  M   GVKPD ITFV  L+AC+H+GL++ G+  F S
Sbjct: 682 YSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQS 741

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M+ +  +EP ++HY CM+D  GRAG  +EA   I +M  + D  +W  LL +C++H NV 
Sbjct: 742 MK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVE 800

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LA++AA++   LDP ++  + +L+NIY++ G W ++  +R++M +  +VK P  S
Sbjct: 801 LAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 174/695 (25%), Positives = 322/695 (46%), Gaps = 89/695 (12%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           KD    NA+L+   K+     A ++ + +   ++  +    SAL++  ++ K L      
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLG----- 127

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
                                      G R +  + K G+  +I++ N L+++YAKCG T
Sbjct: 128 --------------------------DGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNT 161

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A  +F++M E +  ++  ++ G  +     EA ++   M++ +V  D  +  S+L  C
Sbjct: 162 ISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNAC 221

Query: 232 AREGCGVESDVFAQSDNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           A                  +RNV  G++++ L +K G++ DL +  +L++M+ K GD+  
Sbjct: 222 AD-----------------ARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGD 264

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-- 348
           A  +F NLP R +V+W  MI G  +  +  +A  L QRM+  G +PD+V  +++L AC  
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324

Query: 349 ---------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                             + G ++   E+FD +   +V SW AM
Sbjct: 325 PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAM 384

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           ++ ++Q     EA   F +M   G++P+R T   IL +C++   L+ G+Q+    ++   
Sbjct: 385 IAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGY 444

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
             D+ V + L+ +Y+KC   + A RVF +I + ++V WN+MI     +     A   F+ 
Sbjct: 445 GSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQA 504

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           + +  + P   +F ++L+ C    S   G+ VH  I K G  +D+ V +AL+ M+  CGD
Sbjct: 505 LLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGD 564

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  A+  F+ M  ++ V+WN +I G+ Q+G    A   +K M  SG+KPD ITF  +L A
Sbjct: 565 LMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNA 624

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           C+    +  G  + +++  +   +  +   T +I    + G   +A  +  ++P K +  
Sbjct: 625 CASPEALTEGRRL-HALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVY 682

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            W  +++    H      K A E  +++  +   P
Sbjct: 683 SWTSMIAGYAQHGR---GKEALELFYQMQQEGVKP 714



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/612 (25%), Positives = 289/612 (47%), Gaps = 88/612 (14%)

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           VPTH  + ++   +T+      GR   G  +     K+   ANA+L+  +K G    A+ 
Sbjct: 41  VPTHEGIETLRMLTTSF----SGRCPKGRCVVFADIKDTQKANAVLNRLSKAGQFNEAMQ 96

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           V E +   +                               + I   + S++L +C     
Sbjct: 97  VLERVDSSH-------------------------------IQIYRQTYSALLQLCI---- 121

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                       KF     G++++    K G + D+ + N+L++MYAK G+  SA+ IF 
Sbjct: 122 ------------KFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFD 169

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
           ++ E+ V SWN+++ GY Q     +A +L ++M     +PD+ T ++ML AC  + ++  
Sbjct: 170 DMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK 229

Query: 357 GREM-----------------------------------FDSMPSPSVSSWNAMLSSYSQ 381
           GRE+                                   FD++P+  + +W +M++  ++
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
               K+A  LF+ M+  GV+PD+     +L +C     LE GK+VHA   +     + YV
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + ++ +Y+KC   E A  VF  +   ++V W +MIAG + +    EAF+FF +M ++ +
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P + +F ++L +C+  S+  +G+Q+   I + GY +D  V +AL+ MY KCG +  A +
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F+ +  +N V WN MI  Y Q+   D A+  ++ ++  G+KP+  TF +IL  C  S  
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           +++G  + + + +  G+E  L     ++      G    A+ L ++MP K D V W  ++
Sbjct: 530 LELGKWV-HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTII 587

Query: 682 SSCRLHANVRLA 693
           +    H   ++A
Sbjct: 588 AGFVQHGKNQVA 599



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 4/121 (3%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   G+ LHA I       D  +   LI +Y+KC +   A  +F K+P K++YSW +++
Sbjct: 629 EALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMI 688

Query: 62  SAQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +   +    + A +LF +M +  V    +++   +SA    GL E+ L  +  M      
Sbjct: 689 AGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIE 748

Query: 118 P 118
           P
Sbjct: 749 P 749


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 263/753 (34%), Positives = 420/753 (55%), Gaps = 42/753 (5%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           +KA   GK  HA ++        F+ N LI++Y KC++   A  +FD MP +D  SWNA+
Sbjct: 55  RKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAM 114

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L       D+  A KLFD MPER+VVSWN+LIS  + NG   K + V+ +M   G V   
Sbjct: 115 LFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDR 174

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T A V K+ ++L D   G + HGL +K+G D ++   +ALL +YAKC     ++  F  
Sbjct: 175 TTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHS 234

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M E N V+++A+++G  + D +   LE+F+ M +  V +   + +SV   CA        
Sbjct: 235 MPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCA-------- 286

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                     S    G Q+H   +K  F  D+ +  + LDMY K  ++  A+ +F++LP 
Sbjct: 287 --------GLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPN 338

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-VRSGDIKT--- 356
            ++ S+N +I GY +   S K + L           DEV+      AC V  GD++    
Sbjct: 339 HNLQSYNAIIVGYAR---SDKGLGL-----------DEVSLSGAFRACAVIKGDLEGLQV 384

Query: 357 -GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
            G  M  S+   ++   NA+L  Y +     EA  +F EM    V  D  +   I+++  
Sbjct: 385 HGLSM-KSLCQSNICVANAILDMYGKCGALVEACLVFEEM----VSRDAVSWNAIIAAHE 439

Query: 416 AMGILESGKQ--VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
             G  E      +H   +K+   +D++V   LI +YSKC   E AE++  R+ E  +V W
Sbjct: 440 QNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSW 499

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           N++I+G SL     EA   F +M +  + P  F++AT+L +CA L +   G+Q+HAQI K
Sbjct: 500 NAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK 559

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
               +D ++ S L++MY KCG++   +  F+    ++ VTWN M+ GYAQ+G G+EA+++
Sbjct: 560 KELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKI 619

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           ++ M    VKP+  TF+A+L AC H GLV+ G+  F+SM  ++G++P L+HY+C++D +G
Sbjct: 620 FEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMG 679

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           R+G   +A  LI+ MP + D VIW  LLS C++H NV +A++AA  + +L+P++SA Y L
Sbjct: 680 RSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVL 739

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L+NIY++ G W+++  +R++M  N + K+P  S
Sbjct: 740 LSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCS 772



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 151/623 (24%), Positives = 270/623 (43%), Gaps = 111/623 (17%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T + +F+  +    +  G++ H  +I       ++V N L+ +Y KC   + A  VF+ M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSV-----------SLSSVLG 229
            + + V++ AM+ G A    +  A ++F  M  R  VS +S+            +  V  
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 230 VCAREGCGVESDVFA---QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
              R G   +   FA   +S +    +  G Q+H L +K+GF+ D+   ++LLDMYAK  
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG------------- 333
            +D +   F ++PE++ VSW+ +IAG  Q       +EL + M+  G             
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283

Query: 334 ----------------------FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSS 371
                                 F  D V     L   ++  ++   +++F+S+P+ ++ S
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM-GILESGKQVHAAS 430
           +NA++  Y++S+              +G+  D  +L+    +CA + G LE G QVH  S
Sbjct: 344 YNAIIVGYARSD--------------KGLGLDEVSLSGAFRACAVIKGDLE-GLQVHGLS 388

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
           +K+    +  VA+ ++ +Y KC     A  VF  +   D V WN++IA    N  + +  
Sbjct: 389 MKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTL 448

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             F                                 +H +I K     D FVG ALI+MY
Sbjct: 449 SLF---------------------------------IHNRIIKSRLGLDSFVGIALIDMY 475

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            KCG +  A +  D +  +  V+WN +I G++     +EA + +  M+  GV PD+ T+ 
Sbjct: 476 SKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYA 535

Query: 611 AILTACSHSGLVDVGVEIF-----NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            IL  C++   V++G +I        +Q D  +   L      +D   + G+  + +++ 
Sbjct: 536 TILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTL------VDMYSKCGNMQDFQLIF 589

Query: 666 DEMPCKDDPVIWEVLLSSCRLHA 688
           ++ P + D V W  ++     H 
Sbjct: 590 EKAPNR-DFVTWNAMVCGYAQHG 611



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 36/306 (11%)

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
           ++     + T + I   C+    L  GKQ HA  + T      +V + LI +Y KC   E
Sbjct: 35  YQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLE 94

Query: 457 LAERVFHRIPELDIVCWNSMIAG----------------------LSLNSLDIEAFM--- 491
            A +VF  +P+ D V WN+M+ G                      +S NSL I  ++   
Sbjct: 95  FAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSL-ISGYLHNG 153

Query: 492 -------FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
                   F QM +      + +FA VL SC+ L     G Q+H    K G+  D+  GS
Sbjct: 154 DHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGS 213

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
           AL++MY KC  +  + QFF  M  KN V+W+ +I G  QN      + L+K+M  +GV  
Sbjct: 214 ALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGV 273

Query: 605 DDITFVAILTACSHSGLVDVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
              TF ++  +C+    + +G ++  ++++ D G + ++   T  +D   +  +  +A+ 
Sbjct: 274 SQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIG--TATLDMYMKCNNLSDAQK 331

Query: 664 LIDEMP 669
           L + +P
Sbjct: 332 LFNSLP 337


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 273/814 (33%), Positives = 425/814 (52%), Gaps = 92/814 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  +++ G   ++F    LI++YSKC +   A+ +FD +   D  SW A+++   +
Sbjct: 201 GKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQ 260

Query: 67  SDDLEFAYKLFD-----------------------------------EMPERNVVSWNNL 91
               E A K+F+                                   +MP  NVV+WN +
Sbjct: 261 VGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVM 320

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           IS  V+ G + +A+  +  M   G   T  TL SV  A  +L  + +G   H   IK GL
Sbjct: 321 ISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGL 380

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           + N+YV ++L+++YAKC   + A  VF+ + E N V + AM+ G A+     + +++F  
Sbjct: 381 NSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSE 440

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M       D  + +S+L  CA   C +E                G+Q+H   IK  FE +
Sbjct: 441 MRGCGFWPDEFTYTSILSACACLEC-LE---------------MGRQLHSFIIKHNFEYN 484

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L + N+L+DMYAK G ++ A   F  +  R  VSWN +I GY Q+    +A  + +RM  
Sbjct: 485 LFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMIL 544

Query: 332 CGFEPDEVTSINMLVAC-----------------------------------VRSGDIKT 356
            G  PDEV+  ++L  C                                   V+ G I+ 
Sbjct: 545 DGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEA 604

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R +F  MPS SV S NA+++ Y+Q++   EAI LF+EMQ  G+ P   T A +L +C  
Sbjct: 605 ARYVFSCMPSRSVVSMNAIIAGYAQND-LVEAIDLFQEMQNEGLNPSEITFASLLDACTG 663

Query: 417 MGILESGKQVHAASLKTASHID-NYVASGLIGIYSKCQRNELAERVFHRI--PELDIVCW 473
              L  G+Q+H    K     D +++   L+ +Y   QR   A+ +F     P+  I+ W
Sbjct: 664 PYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTIL-W 722

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
            ++I+G + N    EA   +++M +N   P Q +FA+VL +C+ L+S   GR +H+ I  
Sbjct: 723 TAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFH 782

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAVR 592
            G  +D   GSA+++MY KCGD+  + Q F+ M  KN V +WN MI G+A+NGY + A++
Sbjct: 783 VGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALK 842

Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
           ++ +M  + ++PDD+TF+ +LTACSH+G V  G EIF+ M   + + P LDH  CMID L
Sbjct: 843 IFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLL 902

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYS 712
           GR G   EAE  ID++  + + +IW  LL +CR+H +    +RAAE+L  L+P+NS+PY 
Sbjct: 903 GRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYV 962

Query: 713 LLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LL+NIY++ G WD++ +VR  M E  + K P  S
Sbjct: 963 LLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCS 996



 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 222/822 (27%), Positives = 389/822 (47%), Gaps = 123/822 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A    K +HA  L+ G      L + +++LY+KC N                       
Sbjct: 95  QASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGN----------------------- 131

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   +EFA K F+++ +R++++WN+++S   R G  E+ +  +  + N G  P   
Sbjct: 132 --------VEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQF 183

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T A V  +   L+D++ G++ H  VIK+G + N +   +L+ +Y+KCG    A  +F+ +
Sbjct: 184 TYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAV 243

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC---------- 231
            +P+ V++TAM++G  +     EAL++F  M +  +  D V+  +V+  C          
Sbjct: 244 VDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDAC 303

Query: 232 ---------------------AREGCGVES-DVFA---QSDNKFSRNV------------ 254
                                 + GC +E+ D F    ++  K +R+             
Sbjct: 304 DLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLE 363

Query: 255 ---HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
              +G  VH   IK G  +++++ +SL++MYAK   M++A+ +F  L ER++V WN M+ 
Sbjct: 364 ALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLG 423

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------------- 348
           GY Q   ++K ++L   M+ CGF PDE T  ++L AC                       
Sbjct: 424 GYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEY 483

Query: 349 ------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                        + G ++  R+ F+ + +    SWNA++  Y Q E+  EA  +FR M 
Sbjct: 484 NLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMI 543

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
             G+ PD  +LA ILS CA +  LE G+QVH   +K+      Y  S LI +Y KC   E
Sbjct: 544 LDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIE 603

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A  VF  +P   +V  N++IAG + N L +EA   F++M+   + P++ +FA++L +C 
Sbjct: 604 AARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDACT 662

Query: 517 KLSSSFQGRQVHAQIEKDGYVND-IFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTW 574
                  GRQ+H  I+K G + D  F+G +L+ MY        A   F +  + K+T+ W
Sbjct: 663 GPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILW 722

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
             +I G+ QNG  +EA++LY++M  +  +PD  TF ++L ACS    +  G  + +S+  
Sbjct: 723 TAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDG-RMIHSLIF 781

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
             G++      + ++D   + G    +  + +EM  K+D + W  ++     +     A 
Sbjct: 782 HVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENAL 841

Query: 695 RAAEEL--FRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           +  +E+   R+ P +     +L    S  GR  + R + ++M
Sbjct: 842 KIFDEMKHTRIRPDDVTFLGVLTAC-SHAGRVSEGREIFDIM 882


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/796 (32%), Positives = 430/796 (54%), Gaps = 73/796 (9%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  HAH++ +G    TF+ N L+++Y+   +  SA  +FD+MP +D+ SWN +++   K
Sbjct: 25  GKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMINGYAK 84

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S+++  A   F+ MP R+VVSWN+++S  ++NG   K++ V+  M   G      T A +
Sbjct: 85  SNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAII 144

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K  + L D   G + HG+V+++G D ++  A+ALL +YAK      ++ VF+ + E N 
Sbjct: 145 LKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 204

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++A+++G  + + +  AL+ F+ M +    +     +SVL  CA           A S
Sbjct: 205 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA-----------ALS 253

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           + +      G Q+H   +K  F AD  +  + LDMYAK  +M  A+++F      +  S+
Sbjct: 254 ELRL-----GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSY 308

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N MI GY Q+    KA+ L  R+ S G   DE++   +  AC     +  G ++      
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIK 368

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        FD M      SWNA+++++ Q+    E + L
Sbjct: 369 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 428

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F  M    ++PD  T   +L +C   G L  G ++H++ +K+    ++ V   LI +YSK
Sbjct: 429 FVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 487

Query: 452 CQRNELAERVFHR----------IPELD----------IVCWNSMIAGLSLNSLDIEAFM 491
           C   E AE++  R          + EL+           V WNS+I+G  +     +A M
Sbjct: 488 CGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 547

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            F +M +  + P +F++ATVL +CA L+S+  G+Q+HAQ+ K    +D+++ S L++MY 
Sbjct: 548 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYS 607

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCGD++ +R  F+    ++ VTWN MI GYA +G G+EA++L++ MI   +KP+ +TF++
Sbjct: 608 KCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFIS 667

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           IL AC+H GL+D G+E F  M+ D+G++P L HY+ M+D LG++G    A  LI EMP +
Sbjct: 668 ILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFE 727

Query: 672 DDPVIWEVLLSSCRLHA-NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
            D VIW  LL  C +H  NV +A+ A   L RLDP++S+ Y+LL+N+Y+  G W+ +  +
Sbjct: 728 ADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDL 787

Query: 731 RELMSENCIVKDPAYS 746
           R  M    + K+P  S
Sbjct: 788 RRNMRGFKLKKEPGCS 803



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 130/286 (45%), Gaps = 34/286 (11%)

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           CA  G LE GKQ HA  + +      +V + L+ +Y+  +    A  VF R+P  D+V W
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYP----------------------------TQ 505
           N MI G + ++  ++A  FF  M   ++                              T+
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135

Query: 506 F---SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           F   +FA +L  C+ L  +  G Q+H  + + G   D+   SAL++MY K      + + 
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F  +  KN+V+W+ +I G  QN     A++ +K+M           + ++L +C+    +
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 623 DVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
            +G ++  ++++ D   + I+   T  +D   +  +  +A++L D+
Sbjct: 256 RLGGQLHAHALKSDFAADGIVR--TATLDMYAKCDNMQDAQILFDK 299


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/781 (33%), Positives = 422/781 (54%), Gaps = 88/781 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCN-RLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ LH  +  +  F + F+ N R+I +YS C +   ++ +FDK+  K+++          
Sbjct: 17  GRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQ--------- 67

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLA 124
                                 WN ++SA  RN L E A+S+++++ S     P + TL 
Sbjct: 68  ----------------------WNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLP 105

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            V KA   LLD+  G+  HG+  K+ L  +++V NAL+++Y KCG  + AV VFE M E 
Sbjct: 106 CVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPER 165

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMI--RKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           N V++ +++ G ++   + E+   FR M+   ++   D  +L +VL VCA E      D+
Sbjct: 166 NLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGE-----EDI 220

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G  VH L +KLG   +L ++NSL+DMY+K   +  A+++F    +++
Sbjct: 221 -----------EKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKN 269

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKS--CGFEPDEVTSINMLVACVRSGDIKTGREM 360
           +VSWN MI GY ++    +   LLQ+M++     + DE T +N+L  C+   ++++ +E+
Sbjct: 270 IVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKEL 329

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              FD M + +VSSWNA+L  Y+Q+ + 
Sbjct: 330 HGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDP 389

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++A+ L+ +M   G+ PD  T+  +L +C+ M  L  G+++H  +L+    +D ++   L
Sbjct: 390 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISL 449

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y  C +   A+ +F  +    +V WN MIAG S N L  EA   F+QM  + + P +
Sbjct: 450 LSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYE 509

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +   V  +C++LS+   G+++H    K     DIFV S++I+MY K G I  +++ FD 
Sbjct: 510 IAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDR 569

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  K+  +WN +I GY  +G G EA+ L++ M+  G+KPDD TF  IL ACSH+GLV+ G
Sbjct: 570 LREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDG 629

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
           +E FN M   H +EP L+HYTC++D LGRAG   +A  LI+EMP   D  IW  LLSSCR
Sbjct: 630 LEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCR 689

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
           +H N+ L ++ A +L  L+P+    Y L++N+++  G+WDD+R VR  M +  + KD   
Sbjct: 690 IHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGC 749

Query: 746 S 746
           S
Sbjct: 750 S 750



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 157/625 (25%), Positives = 289/625 (46%), Gaps = 59/625 (9%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANA-LLSLYAKCGWTKHAVPVFEEM 181
           +  + +A     D+E GRR H +V       N +V N  ++++Y+ CG    +  VF+++
Sbjct: 1   MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVES 240
              N   + A++S   + +   +A+ +F  +I       D+ +L  V+  CA        
Sbjct: 61  RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA-------- 112

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                 D        GQ +H +  K+   +D+ + N+L+ MY K G ++ A  +F ++PE
Sbjct: 113 ---GLLDLGL-----GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPE 164

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRM--KSCGFEPDEVTSINMLVACVRSGDIKTG- 357
           R++VSWN +I G+ +     ++    + M      F PD  T + +L  C    DI+ G 
Sbjct: 165 RNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGM 224

Query: 358 ----------------------------------REMFDSMPSPSVSSWNAMLSSYSQSE 383
                                             + +FD     ++ SWN+M+  Y++ E
Sbjct: 225 AVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREE 284

Query: 384 NHKEAIKLFREMQFRG--VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +      L ++MQ     +K D  T+  +L  C     L+S K++H  S +     +  V
Sbjct: 285 DVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELV 344

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
           A+  I  Y++C     +ERVF  +    +  WN+++ G + NS   +A   + QM  + +
Sbjct: 345 ANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGL 404

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P  F+  ++L +C+++ S   G ++H    ++G   D F+G +L+ +Y  CG  + A+ 
Sbjct: 405 DPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQV 464

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            FD M  ++ V+WN MI GY+QNG  DEA+ L++ M++ G++P +I  + +  ACS    
Sbjct: 465 LFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSA 524

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           + +G E+       H  E I    + +ID   + G    ++ + D +  K D   W V++
Sbjct: 525 LRLGKELHCFALKAHLTEDIFVS-SSIIDMYAKGGCIGLSQRIFDRLREK-DVASWNVII 582

Query: 682 SSCRLHANVRLAKRAAEELFRLDPK 706
           +   +H   + A    E++ RL  K
Sbjct: 583 AGYGIHGRGKEALELFEKMLRLGLK 607


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/781 (32%), Positives = 410/781 (52%), Gaps = 51/781 (6%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           + A   G+  HA +L +G    TF+ N L+++Y++C     A+ +FD MPH+D  SWN +
Sbjct: 17  RSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTM 76

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L+A   + D   A  LF  MP+ +VVSWN L+S   + G+   ++ +  +M+  G  P  
Sbjct: 77  LTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDR 136

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            TLA + KA   L D+  G + H + +K GL+ ++   +AL+ +Y KC   + A+  F  
Sbjct: 137 TTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHG 196

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M E N V++ A ++G  + ++    LE+F  M R  + +   + +SV   CA   C   +
Sbjct: 197 MGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTA 256

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                           +Q+H   IK  F AD  +  +++D+YAK   +  A   F +LP 
Sbjct: 257 ----------------RQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPN 300

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------V 349
            +V + N M+ G  +     +A++L Q M   G   D V+   +  AC           V
Sbjct: 301 HTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQV 360

Query: 350 RSGDIKTGRE------------------------MFDSMPSPSVSSWNAMLSSYSQSENH 385
               IK+G +                        +F  M      SWNA++++  Q+E +
Sbjct: 361 HCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECY 420

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++ I    EM   G++PD  T   +L +CA +  LE G  VH  ++K+   +D +V+S +
Sbjct: 421 EDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTV 480

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y KC     A+++  RI   ++V WNS+I+G SLN    EA  FF +M    + P  
Sbjct: 481 VDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDH 540

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           F++ATVL +CA L++   G+Q+H QI K   + D ++ S L++MY KCG++  +   F+ 
Sbjct: 541 FTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEK 600

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
               + V+WN MI GYA +G G EA+ +++ M  + V P+  TFVA+L ACSH GL+D G
Sbjct: 601 AQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDG 660

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
              F  M   + +EP L+H+ CM+D LGR+    EA   I  MP + D VIW+ LLS C+
Sbjct: 661 CRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICK 720

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
           +  +V +A+ AA  + RLDP +S+ Y LL+N+Y+  G+W D+   R LM +  + K+P  
Sbjct: 721 IRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGC 780

Query: 746 S 746
           S
Sbjct: 781 S 781



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 33/210 (15%)

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           FS    L + A  S+   G+  HA++   G++   FV + L++MY +CG    AR  FD+
Sbjct: 5   FSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDV 64

Query: 566 MHGKNTVTWNEM-------------------------------IHGYAQNGYGDEAVRLY 594
           M  ++TV+WN M                               + GY Q G   ++V L 
Sbjct: 65  MPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLS 124

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
            +M   GV PD  T   +L AC     + +GV+I +++ +  G+E  +   + ++D  G+
Sbjct: 125 VEMARRGVAPDRTTLAVLLKACGGLEDLALGVQI-HAVAVKTGLEMDVRAGSALVDMYGK 183

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
                +A      M  + + V W   ++ C
Sbjct: 184 CRSLEDALRFFHGMG-ERNSVSWGAAIAGC 212


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/757 (31%), Positives = 413/757 (54%), Gaps = 56/757 (7%)

Query: 29  LIELYSKCNNTHSAQHLFDKMP----HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERN 84
           L++L  K  N    + +++ +       DI+ WN +++   K  +   A ++FD+M E++
Sbjct: 116 LLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKD 175

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
           V SWN L+   V++GL E+A  ++ +M  +   P   T  S+  A     +V+ GR  + 
Sbjct: 176 VYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYN 235

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
           L++K G D +++V  AL++++ KCG    A  VF+ +   + VT+T+M++GLA+  R  +
Sbjct: 236 LILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQ 295

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           A  +F+ M  + V  D V+  S+L  C                N       G++VH    
Sbjct: 296 ACNLFQRMEEEGVQPDKVAFVSLLRAC----------------NHPEALEQGKKVHARMK 339

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           ++G++ ++++  ++L MY K G M+ A  +F  +  R+VVSW  MIAG+ Q  +  +A  
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFL 399

Query: 325 LLQRMKSCGFEPDEVTSINMLVAC-----------------------------------V 349
              +M   G EP+ VT +++L AC                                    
Sbjct: 400 FFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA 459

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           + G +K    +F+ +   +V +WNAM+++Y Q E +  A+  F+ +   G+KP+ +T   
Sbjct: 460 KCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTS 519

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           IL+ C +   LE GK VH   +K     D +V++ L+ ++  C     A+ +F+ +P+ D
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRD 579

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V WN++IAG   +  +  AF +FK M+++ + P + +F  +L++CA   +  +GR++HA
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            I +  +  D+ VG+ LI MY KCG I  A Q F  +  KN  +W  MI GYAQ+G G E
Sbjct: 640 LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKE 699

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+ L+  M   GVKPD ITFV  L+AC+H+GL++ G+  F SM+ +  +EP ++HY CM+
Sbjct: 700 ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMV 758

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
           D  GRAG  +EA   I +M  + D  +W  LL +C++H NV LA++AA++   LDP ++ 
Sbjct: 759 DLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNG 818

Query: 710 PYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + +L+NIY++ G W ++  +R++M +  +VK P  S
Sbjct: 819 VFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 174/695 (25%), Positives = 322/695 (46%), Gaps = 89/695 (12%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           KD    NA+L+   K+     A ++ + +   ++  +    SAL++  ++ K L      
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLG----- 127

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
                                      G R +  + K G+  +I++ N L+++YAKCG T
Sbjct: 128 --------------------------DGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNT 161

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A  +F++M E +  ++  ++ G  +     EA ++   M++ +V  D  +  S+L  C
Sbjct: 162 ISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNAC 221

Query: 232 AREGCGVESDVFAQSDNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           A                  +RNV  G++++ L +K G++ DL +  +L++M+ K GD+  
Sbjct: 222 AD-----------------ARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGD 264

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-- 348
           A  +F NLP R +V+W  MI G  +  +  +A  L QRM+  G +PD+V  +++L AC  
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324

Query: 349 ---------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                             + G ++   E+FD +   +V SW AM
Sbjct: 325 PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAM 384

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           ++ ++Q     EA   F +M   G++P+R T   IL +C++   L+ G+Q+    ++   
Sbjct: 385 IAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGY 444

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
             D+ V + L+ +Y+KC   + A RVF +I + ++V WN+MI     +     A   F+ 
Sbjct: 445 GSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQA 504

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           + +  + P   +F ++L+ C    S   G+ VH  I K G  +D+ V +AL+ M+  CGD
Sbjct: 505 LLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGD 564

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  A+  F+ M  ++ V+WN +I G+ Q+G    A   +K M  SG+KPD ITF  +L A
Sbjct: 565 LMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNA 624

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           C+    +  G  + +++  +   +  +   T +I    + G   +A  +  ++P K +  
Sbjct: 625 CASPEALTEGRRL-HALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVY 682

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            W  +++    H      K A E  +++  +   P
Sbjct: 683 SWTSMITGYAQHGR---GKEALELFYQMQQEGVKP 714



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 159/612 (25%), Positives = 289/612 (47%), Gaps = 88/612 (14%)

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           VPTH  + ++   +T+      GR   G  +     K+   ANA+L+  +K G    A+ 
Sbjct: 41  VPTHEGIETLRMLTTSF----SGRCPKGRCVVFADIKDTQKANAVLNRLSKAGQFNEAMQ 96

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           V E +   +                               + I   + S++L +C     
Sbjct: 97  VLERVDSSH-------------------------------IQIYRQTYSALLQLCI---- 121

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                       KF     G++++    K G + D+ + N+L++MYAK G+  SA+ IF 
Sbjct: 122 ------------KFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFD 169

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
           ++ E+ V SWN+++ GY Q     +A +L ++M     +PD+ T ++ML AC  + ++  
Sbjct: 170 DMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK 229

Query: 357 GREM-----------------------------------FDSMPSPSVSSWNAMLSSYSQ 381
           GRE+                                   FD++P+  + +W +M++  ++
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
               K+A  LF+ M+  GV+PD+     +L +C     LE GK+VHA   +     + YV
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + ++ +Y+KC   E A  VF  +   ++V W +MIAG + +    EAF+FF +M ++ +
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P + +F ++L +C+  S+  +G+Q+   I + GY +D  V +AL+ MY KCG +  A +
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F+ +  +N V WN MI  Y Q+   D A+  ++ ++  G+KP+  TF +IL  C  S  
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           +++G  + + + +  G+E  L     ++      G    A+ L ++MP K D V W  ++
Sbjct: 530 LELGKWV-HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTII 587

Query: 682 SSCRLHANVRLA 693
           +    H   ++A
Sbjct: 588 AGFVQHGKNQVA 599



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 4/121 (3%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   G+ LHA I       D  +   LI +Y+KC +   A  +F K+P K++YSW +++
Sbjct: 629 EALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMI 688

Query: 62  SAQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +   +    + A +LF +M +  V    +++   +SA    GL E+ L  +  M      
Sbjct: 689 TGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIE 748

Query: 118 P 118
           P
Sbjct: 749 P 749


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1028

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 275/814 (33%), Positives = 414/814 (50%), Gaps = 92/814 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +++ GL  +++    L+++Y+KC+    AQ +FD +   +   W  + S   K
Sbjct: 179 GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVK 238

Query: 67  S--------------------DDLEF---------------AYKLFDEMPERNVVSWNNL 91
           +                    D L F               A  LF EMP  +VV+WN +
Sbjct: 239 AGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVM 298

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           IS   + G E  A+  +  M       T  TL SV  A   + +++ G   H   IK+GL
Sbjct: 299 ISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
             NIYV ++L+S+Y+KC   + A  VFE + E N+V + AM+ G A      + +E+F  
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMD 418

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M     +ID  + +S+L  CA     V  D+             G Q H + IK     +
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCA-----VSHDL-----------EMGSQFHSIIIKKKLTKN 462

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L + N+L+DMYAK G ++ A  IF ++ +R  VSWN +I GY Q    ++A +L  RM S
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNS 522

Query: 332 CGFEPDEVTSINMLVACV-----------------------------------RSGDIKT 356
           CG   D     + L AC                                    + G I+ 
Sbjct: 523 CGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIED 582

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R++F SMP  SV S NA+++ YSQ+ N +EA+ LF+EM  +GV P   T A I+ +C  
Sbjct: 583 ARKVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKGVNPSEITFATIVEACHK 641

Query: 417 MGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAERVFHRI--PELDIVCW 473
              L  G Q H   +K   S    Y+   L+G+Y   +R   A  +F  +  P+  IV W
Sbjct: 642 PESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPK-SIVLW 700

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
             M++G S N    EA  F+K+MR +   P Q +F TVL  C+ LSS  +GR +H+ I  
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAVR 592
             +  D    + LI+MY KCGD+  + Q FD M  + N V+WN +I+GYA+NGY ++A++
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820

Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
           ++  M  S + PD+ITF+ +LTACSH+G V  G +IF  M   +G+E  +DH  CM+D L
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYS 712
           GR G+  EA+  I+    K D  +W  LL +CR+H +    + AAE L  L+P+NS+ Y 
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYV 940

Query: 713 LLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LL+NIY+S GRW++  A+R+ M +  + K P YS
Sbjct: 941 LLSNIYASQGRWEEANALRKAMRDRGVKKVPGYS 974



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 220/786 (27%), Positives = 360/786 (45%), Gaps = 118/786 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH---------KDIYS- 56
           G+ ++ H+L N       +   L+E+  +      ++ +FD+MPH         K ++S 
Sbjct: 30  GRRVYGHVLPN----HDQIHQGLLEICLEQCKLFKSRKVFDEMPHRLALALRIGKAVHSK 85

Query: 57  ------------WNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKA 104
                        NAI+    K   + +A K F+ + E++V +WN+++S     G   K 
Sbjct: 86  SLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKV 144

Query: 105 LSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL 164
           L  +  +      P   T + V   S    +VE GR+ H  +IK+GL++N Y   AL+ +
Sbjct: 145 LRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDM 204

Query: 165 YAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF--------------- 209
           YAKC     A  VF+ + +PN V +T + SG  K     EA+ +F               
Sbjct: 205 YAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAF 264

Query: 210 ----------------RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF----AQSDNK 249
                           RL+  +  S D V+ + ++    + GC + +  +     +S  K
Sbjct: 265 VTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVK 324

Query: 250 FSRNVHGQ---------------QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
            +R+  G                 VH   IKLG  +++++ +SL+ MY+K   M++A  +
Sbjct: 325 STRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV 384

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  L ER+ V WN MI GY    +S K +EL   MKS G+  D+ T  ++L  C  S D+
Sbjct: 385 FEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDL 444

Query: 355 KTG-----------------------------------REMFDSMPSPSVSSWNAMLSSY 379
           + G                                   R++F+ M      SWN ++  Y
Sbjct: 445 EMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGY 504

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
            Q EN  EA  LF  M   G+  D   LA  L +C  +  L  GKQVH  S+K       
Sbjct: 505 VQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVL 564

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           +  S LI +YSKC   E A +VF  +PE  +V  N++IAG S N+L+ EA + F++M   
Sbjct: 565 HTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTK 623

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND-IFVGSALIEMYCKCGDIYG 558
            + P++ +FAT++ +C K  S   G Q H QI K G+ ++  ++G +L+ +Y     +  
Sbjct: 624 GVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAE 683

Query: 559 ARQFF-DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
           A   F ++   K+ V W  M+ G++QNG+ +EA++ YK+M   G  PD  TFV +L  CS
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCS 743

Query: 618 HSGLVDVGVEIFNSM-QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
               +  G  I + +  L H ++ +  +   +ID   + G    +  + DEM  + + V 
Sbjct: 744 VLSSLREGRAIHSLIFHLAHDLDELTSN--TLIDMYAKCGDMKSSSQVFDEMRRRSNVVS 801

Query: 677 WEVLLS 682
           W  L++
Sbjct: 802 WNSLIN 807


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/815 (31%), Positives = 424/815 (52%), Gaps = 93/815 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA------- 59
           G+ +H  ++++G     F    L+++Y+KC +  +A+ +FD +   D   W++       
Sbjct: 177 GRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHR 236

Query: 60  ----------------------------ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
                                       I+S    S  L+ A  L  +MP  + V+WN +
Sbjct: 237 VGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAV 296

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           IS   ++GLE   L +Y  M + G  PT  T AS+  A+  +     G++ H   +  GL
Sbjct: 297 ISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGL 356

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D N++V ++L++LYAKCG    A  VF+   E N V + AM++G  + +   EA+ MF+ 
Sbjct: 357 DANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQY 416

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M+R  +  D  +  S+LG C                   S    G+QVHC+TIK   +  
Sbjct: 417 MMRYTLQTDEFTFVSILGAC----------------TYLSSFYLGKQVHCVTIKNCMDIS 460

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L ++N+ LDMY+K G +  A+ +FS +P +  +SWN +  G  Q  +  +A+ +L+RM+ 
Sbjct: 461 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRL 520

Query: 332 CGFEPDEVTSINMLVACV-----------------------------------RSGDIKT 356
            G  PD+V+    + AC                                    + GD+++
Sbjct: 521 HGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVES 580

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R++F  + + S+   NA+++ + Q+ N  EAI+LF+++   G+KP   T + ILS C+ 
Sbjct: 581 SRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS- 639

Query: 417 MGILES--GKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERVFHRIPE-LDIVC 472
            G L S  GKQVH  +LK+   + D  +   L GIY K +  E A ++   +P+  ++  
Sbjct: 640 -GSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE 698

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           W ++I+G + N     + + F +MR   +   + +FA+VL +C+ +++   G+++H  I 
Sbjct: 699 WTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLIT 758

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAV 591
           K G+ +     SALI+MY KCGD+  + + F  +  K  +  WN MI G+A+NGY DEA+
Sbjct: 759 KSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEAL 818

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
            L++ M    +KPD++TF+ +L AC+HSGL+  G   F SM+  +G+ P LDHY C ID 
Sbjct: 819 LLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDL 878

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           LGR GH  EA+  ID++P + D V+W   L++CR+H +    K AA +L  L+P+ S+ Y
Sbjct: 879 LGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTY 938

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LL++++++ G W + +  RE M E  + K P  S
Sbjct: 939 VLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCS 973



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 258/500 (51%), Gaps = 18/500 (3%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           R  HG +++ G      + ++L+ LY K G   +A        E      ++++S  A++
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 200 DRVVEALEMFRLMIRKAVS-IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
               + L  FR +   A    D   L+ VL  C+R G      V A          +G+Q
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVG------VLA----------YGRQ 179

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           VHC  +K GF + +    +L+DMYAK GD+ +A  +F  +     + W+ MIA Y +   
Sbjct: 180 VHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGC 239

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
             +A+ L  RM   G  PD+VT + ++     SG +     +   MP+PS  +WNA++S 
Sbjct: 240 YQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISG 299

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           ++QS      + L+++M+  G+ P R+T A +LS+ A M     G+Q+HAA++      +
Sbjct: 300 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 359

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
            +V S LI +Y+KC     A+ VF    E +IV WN+M+ G   N L  EA   F+ M +
Sbjct: 360 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 419

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
             +   +F+F ++L +C  LSS + G+QVH    K+     +FV +A ++MY K G I  
Sbjct: 420 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGD 479

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A+  F ++  K++++WN +  G AQN   +EAV + K M   G+ PDD++F   + ACS+
Sbjct: 480 AKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSN 539

Query: 619 SGLVDVGVEIFNSMQLDHGV 638
               + G +I + + + +G+
Sbjct: 540 IRATETGKQI-HCLAIKYGI 558



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 175/712 (24%), Positives = 320/712 (44%), Gaps = 89/712 (12%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGF 116
           ++++   CKS  + +A+       ER   + ++L+S   R+G     L  +  +    G 
Sbjct: 95  DSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGG 154

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
            P    LA V  A + +  + +GR+ H  V+K G   +++   AL+ +YAKCG   +A  
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG- 235
           VF+ ++ P+ + +++M++   +     EAL +F  M +   + D V+L +++   A  G 
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 274

Query: 236 ----------------------------CGVESDVFAQSDNKFSRN-------------- 253
                                        G+E +V     +  S                
Sbjct: 275 LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSA 334

Query: 254 -------VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                  V GQQ+H   +  G +A++ + +SL+++YAK G    A+ +F    E+++V W
Sbjct: 335 AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMW 394

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
           N M+ G+ Q     +AI + Q M     + DE T +++L AC                  
Sbjct: 395 NAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 454

Query: 350 ------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G I   + +F  +P     SWNA+    +Q+   +EA+ +
Sbjct: 455 NCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCM 514

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
            + M+  G+ PD  + +  +++C+ +   E+GKQ+H  ++K     ++ V S LI +YSK
Sbjct: 515 LKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSK 574

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
               E + ++F ++    IV  N++IAG   N+ + EA   F+Q+ ++ + P+  +F+++
Sbjct: 575 HGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSI 634

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQFF-DMMHGK 569
           LS C+   +S  G+QVH    K G + +D  +G +L  +Y K   +  A +   +M   K
Sbjct: 635 LSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHK 694

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           N   W  +I GYAQNGYGD ++  +  M    V+ D+ TF ++L ACS       G EI 
Sbjct: 695 NLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI- 753

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           + +    G        + +ID   + G    +     E+  K D + W  ++
Sbjct: 754 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 150/570 (26%), Positives = 258/570 (45%), Gaps = 85/570 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA V G+ +HA  + +GL  + F+ + LI LY+KC     A+++FD    K+I  WNA+L
Sbjct: 339 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 398

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                          +  V+N L E+A+ ++  M          
Sbjct: 399 -------------------------------TGFVQNELPEEAIRMFQYMMRYTLQTDEF 427

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  S+  A T L     G++ H + IK  +D +++VANA L +Y+K G    A  +F  +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + +++ A+  GLA+     EA+ M + M    ++ D VS S+ +  C        S+
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC--------SN 539

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           + A           G+Q+HCL IK G  ++  + +SL+D+Y+K+GD++S+  IF+ +   
Sbjct: 540 IRATET--------GKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDAS 591

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-- 359
           S+V  N +IAG+ Q     +AI+L Q++   G +P  VT  ++L  C  S +   G++  
Sbjct: 592 SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVH 651

Query: 360 ----------------------------------MFDSMPS-PSVSSWNAMLSSYSQSEN 384
                                             +   MP   ++  W A++S Y+Q+  
Sbjct: 652 CYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGY 711

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
              ++  F  M+   V+ D  T A +L +C+ +     GK++H    K+         S 
Sbjct: 712 GDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSA 771

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           LI +YSKC     +   F  +  + DI+ WNSMI G + N    EA + F++M + ++ P
Sbjct: 772 LIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKP 831

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
            + +F  VL +C       +GR     + K
Sbjct: 832 DEVTFLGVLIACTHSGLISEGRHFFGSMRK 861


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 271/814 (33%), Positives = 418/814 (51%), Gaps = 92/814 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H ++++ G    ++    LI +Y+KCN    A+ +FD     D  SW +++    K
Sbjct: 179 GRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIK 238

Query: 67  SDDLEFAYKLFDEM-----------------------------------PERNVVSWNNL 91
               E A K+F EM                                   P RNVV+WN +
Sbjct: 239 VGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLM 298

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           IS   + G   +A+  +  M   G   T  TL SV  A  +L  ++ G   H   +K GL
Sbjct: 299 ISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGL 358

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
             N+YV ++L+S+YAKCG  + A  VF+ ++E N V + AM+ G  +     E +E+F  
Sbjct: 359 HSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFN 418

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M       D  + SS+L  CA   C    D+             G Q+H + IK  F ++
Sbjct: 419 MKSCGFYPDDFTYSSILSACA---CLKYLDL-------------GHQLHSVIIKNKFASN 462

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L + N+L+DMYAK+G ++ A   F  +  R  VSWNV+I GY Q+    +A  L +RM  
Sbjct: 463 LFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNL 522

Query: 332 CGFEPDEVTSINMLVAC-----------VRSGDIKTGRE--------------------- 359
            G  PDEV+  ++L AC           V    +KTG+E                     
Sbjct: 523 LGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDS 582

Query: 360 ---MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
              +   MP  SV S NA+++ Y+Q  N ++A+ LFR+M   G+     T A +L +C  
Sbjct: 583 AHKILACMPERSVVSMNALIAGYAQI-NLEQAVNLFRDMLVEGINSTEITFASLLDACHE 641

Query: 417 MGILESGKQVHAASLKTASHIDN-YVASGLIGIYSKCQRNELAERVFHRI--PELDIVCW 473
              L  G+Q+H+  LK    +D+ ++   L+G+Y    R   A  +F     P+  +V W
Sbjct: 642 QQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVV-W 700

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
            +MI+GLS N   + A   +K+MR   + P Q +F + L +CA +SS   G + H+ I  
Sbjct: 701 TAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFH 760

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEMIHGYAQNGYGDEAVR 592
            G+ +D    SAL++MY KCGD+  + Q F +M   K+ ++WN MI G+A+NGY ++A+R
Sbjct: 761 TGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALR 820

Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
           ++ +M  S V PDD+TF+ +LTACSHSG V  G  IF+ M   +G++P  DH  CM+D L
Sbjct: 821 VFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLL 880

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYS 712
           GR G   EAE  I+++  + D  +W  +L +CR+H +    ++AAE+L  L+P+NS+PY 
Sbjct: 881 GRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYV 940

Query: 713 LLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LL+NIY++ G WD++  +R  M E  + K P  S
Sbjct: 941 LLSNIYAASGNWDEVNTLRREMREKGVKKLPGCS 974



 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 210/761 (27%), Positives = 355/761 (46%), Gaps = 120/761 (15%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K++HA  L+ G +    L N +++LY+KC                               
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCA------------------------------ 108

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            D+++A + F ++ ++++++WN+++S   + G     +  +  + N G  P   T A V 
Sbjct: 109 -DVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVL 167

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            +   L  V+ GR+ H  V+K+G +   Y   AL+ +YAKC +   A  +F+   E ++V
Sbjct: 168 SSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKV 227

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC---------------- 231
           ++T+M+ G  K     EA+++F+ M +     D V+  +V+                   
Sbjct: 228 SWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRM 287

Query: 232 ---------------AREGCGVESDVFAQSDNKF----SRNVHGQ--------------- 257
                          A+ G GVE+  F Q+  K     +R+  G                
Sbjct: 288 PNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGL 347

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
            VH   +K G  +++++ +SL+ MYAK G M++A+ +F  L E++VV WN M+ GY Q  
Sbjct: 348 LVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNG 407

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------------------- 348
            + + +EL   MKSCGF PD+ T  ++L AC                             
Sbjct: 408 YANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGN 467

Query: 349 ------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                  +SG ++  R+ F+ + +    SWN ++  Y Q E+  EA  LFR M   G+ P
Sbjct: 468 ALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILP 527

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  +LA ILS+CA++  LE GKQVH  S+KT      Y  S LI +Y+KC   + A ++ 
Sbjct: 528 DEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKIL 587

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             +PE  +V  N++IAG +  +L+ +A   F+ M    +  T+ +FA++L +C +     
Sbjct: 588 ACMPERSVVSMNALIAGYAQINLE-QAVNLFRDMLVEGINSTEITFASLLDACHEQQKLN 646

Query: 523 QGRQVHAQIEKDGY-VNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEMIHG 580
            GRQ+H+ I K G  ++D F+G +L+ MY        A   F +  + K+ V W  MI G
Sbjct: 647 LGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISG 706

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
            +QN     A++LYK+M +  V PD  TFV+ L AC+    +  G E  +S+    G + 
Sbjct: 707 LSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTET-HSLIFHTGFDS 765

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
                + ++D   + G    +  +  EM  K D + W  ++
Sbjct: 766 DELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMI 806



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 116/211 (54%)

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           + K +HA SLK        + + ++ +Y+KC   + AER F ++ + DI+ WNS+++  S
Sbjct: 77  TNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHS 136

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
                     +F  +  + ++P +F+FA VLSSCA+L     GRQVH  + K G+ +  +
Sbjct: 137 KQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISY 196

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
              ALI MY KC  +  AR  FD     + V+W  MI GY + G  +EAV+++++M   G
Sbjct: 197 CEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVG 256

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
            +PD + FV ++ A    G +D   ++F+ M
Sbjct: 257 QEPDQVAFVTVINAYVDLGRLDNASDLFSRM 287


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/815 (31%), Positives = 424/815 (52%), Gaps = 93/815 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA------- 59
           G+ +H  ++++G     F    L+++Y+KC +  +A+ +FD +   D   W++       
Sbjct: 187 GRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHR 246

Query: 60  ----------------------------ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
                                       I+S    S  L+ A  L  +MP  + V+WN +
Sbjct: 247 VGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAV 306

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           IS   ++GLE   L +Y  M + G  PT  T AS+  A+  +     G++ H   +  GL
Sbjct: 307 ISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGL 366

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D N++V ++L++LYAKCG    A  VF+   E N V + AM++G  + +   EA+ MF+ 
Sbjct: 367 DANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQY 426

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M+R  +  D  +  S+LG C                   S    G+QVHC+TIK   +  
Sbjct: 427 MMRYTLQTDEFTFVSILGAC----------------TYLSSFYLGKQVHCVTIKNCMDIS 470

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L ++N+ LDMY+K G +  A+ +FS +P +  +SWN +  G  Q  +  +A+ +L+RM+ 
Sbjct: 471 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRL 530

Query: 332 CGFEPDEVTSINMLVACV-----------------------------------RSGDIKT 356
            G  PD+V+    + AC                                    + GD+++
Sbjct: 531 HGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVES 590

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R++F  + + S+   NA+++ + Q+ N  EAI+LF+++   G+KP   T + ILS C+ 
Sbjct: 591 SRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS- 649

Query: 417 MGILES--GKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERVFHRIPE-LDIVC 472
            G L S  GKQVH  +LK+   + D  +   L GIY K +  E A ++   +P+  ++  
Sbjct: 650 -GSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE 708

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           W ++I+G + N     + + F +MR   +   + +FA+VL +C+ +++   G+++H  I 
Sbjct: 709 WTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLIT 768

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAV 591
           K G+ +     SALI+MY KCGD+  + + F  +  K  +  WN MI G+A+NGY DEA+
Sbjct: 769 KSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEAL 828

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
            L++ M    +KPD++TF+ +L AC+HSGL+  G   F SM+  +G+ P LDHY C ID 
Sbjct: 829 LLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDL 888

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           LGR GH  EA+  ID++P + D V+W   L++CR+H +    K AA +L  L+P+ S+ Y
Sbjct: 889 LGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTY 948

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LL++++++ G W + +  RE M E  + K P  S
Sbjct: 949 VLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCS 983



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 258/500 (51%), Gaps = 18/500 (3%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           R  HG +++ G      + ++L+ LY K G   +A        E      ++++S  A++
Sbjct: 86  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145

Query: 200 DRVVEALEMFRLMIRKAVS-IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
               + L  FR +   A    D   L+ VL  C+R G      V A          +G+Q
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVG------VLA----------YGRQ 189

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           VHC  +K GF + +    +L+DMYAK GD+ +A  +F  +     + W+ MIA Y +   
Sbjct: 190 VHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGC 249

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
             +A+ L  RM   G  PD+VT + ++     SG +     +   MP+PS  +WNA++S 
Sbjct: 250 YQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISG 309

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           ++QS      + L+++M+  G+ P R+T A +LS+ A M     G+Q+HAA++      +
Sbjct: 310 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 369

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
            +V S LI +Y+KC     A+ VF    E +IV WN+M+ G   N L  EA   F+ M +
Sbjct: 370 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 429

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
             +   +F+F ++L +C  LSS + G+QVH    K+     +FV +A ++MY K G I  
Sbjct: 430 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGD 489

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A+  F ++  K++++WN +  G AQN   +EAV + K M   G+ PDD++F   + ACS+
Sbjct: 490 AKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSN 549

Query: 619 SGLVDVGVEIFNSMQLDHGV 638
               + G +I + + + +G+
Sbjct: 550 IRATETGKQI-HCLAIKYGI 568



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 175/712 (24%), Positives = 320/712 (44%), Gaps = 89/712 (12%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGF 116
           ++++   CKS  + +A+       ER   + ++L+S   R+G     L  +  +    G 
Sbjct: 105 DSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGG 164

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
            P    LA V  A + +  + +GR+ H  V+K G   +++   AL+ +YAKCG   +A  
Sbjct: 165 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 224

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG- 235
           VF+ ++ P+ + +++M++   +     EAL +F  M +   + D V+L +++   A  G 
Sbjct: 225 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 284

Query: 236 ----------------------------CGVESDVFAQSDNKFSRN-------------- 253
                                        G+E +V     +  S                
Sbjct: 285 LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSA 344

Query: 254 -------VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                  V GQQ+H   +  G +A++ + +SL+++YAK G    A+ +F    E+++V W
Sbjct: 345 AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMW 404

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
           N M+ G+ Q     +AI + Q M     + DE T +++L AC                  
Sbjct: 405 NAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 464

Query: 350 ------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G I   + +F  +P     SWNA+    +Q+   +EA+ +
Sbjct: 465 NCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCM 524

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
            + M+  G+ PD  + +  +++C+ +   E+GKQ+H  ++K     ++ V S LI +YSK
Sbjct: 525 LKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSK 584

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
               E + ++F ++    IV  N++IAG   N+ + EA   F+Q+ ++ + P+  +F+++
Sbjct: 585 HGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSI 644

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQFF-DMMHGK 569
           LS C+   +S  G+QVH    K G + +D  +G +L  +Y K   +  A +   +M   K
Sbjct: 645 LSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHK 704

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           N   W  +I GYAQNGYGD ++  +  M    V+ D+ TF ++L ACS       G EI 
Sbjct: 705 NLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI- 763

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           + +    G        + +ID   + G    +     E+  K D + W  ++
Sbjct: 764 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 815



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 161/635 (25%), Positives = 283/635 (44%), Gaps = 97/635 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA V G+ +HA  + +GL  + F+ + LI LY+KC     A+++FD    K+I  WNA+L
Sbjct: 349 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 408

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                          +  V+N L E+A+ ++  M          
Sbjct: 409 -------------------------------TGFVQNELPEEAIRMFQYMMRYTLQTDEF 437

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  S+  A T L     G++ H + IK  +D +++VANA L +Y+K G    A  +F  +
Sbjct: 438 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 497

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + +++ A+  GLA+     EA+ M + M    ++ D VS S+ +  C        S+
Sbjct: 498 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC--------SN 549

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           + A           G+Q+HCL IK G  ++  + +SL+D+Y+K+GD++S+  IF+ +   
Sbjct: 550 IRATET--------GKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDAS 601

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-- 359
           S+V  N +IAG+ Q     +AI+L Q++   G +P  VT  ++L  C  S +   G++  
Sbjct: 602 SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVH 661

Query: 360 ----------------------------------MFDSMPS-PSVSSWNAMLSSYSQSEN 384
                                             +   MP   ++  W A++S Y+Q+  
Sbjct: 662 CYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGY 721

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
              ++  F  M+   V+ D  T A +L +C+ +     GK++H    K+         S 
Sbjct: 722 GDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSA 781

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           LI +YSKC     +   F  +  + DI+ WNSMI G + N    EA + F++M + ++ P
Sbjct: 782 LIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKP 841

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEK-DGYVNDIFVGSALIEMYCKCGDIYGARQF 562
            + +F  VL +C       +GR     + K  G    +   +  I++  + G +  A++ 
Sbjct: 842 DEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEA 901

Query: 563 FDMMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKD 596
            D +  + + V W   +           A R++KD
Sbjct: 902 IDQLPFRPDGVVWATYL----------AACRMHKD 926


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/729 (33%), Positives = 397/729 (54%), Gaps = 51/729 (6%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           DI    A+++   +  D++ A + F    +R+VV +N LI+AL ++G   +A   Y +M 
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           ++G      T  S+  A +    +E G+  H  + + G   ++ + NAL+S+YA+CG   
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +F  M + + +++ A+++G A+ +   EA+ +++ M  + V    V+   +L  CA
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                  S  +A           G+ +H   ++ G +++ HL+N+L++MY + G +  A+
Sbjct: 443 ------NSSAYAD----------GKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ 486

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---- 348
            +F     R V+SWN MIAG+ Q      A +L Q M++   EPD +T  ++L  C    
Sbjct: 487 NVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPE 546

Query: 349 -------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                                          +R G ++  R +F S+    V SW AM+ 
Sbjct: 547 ALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIG 606

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
             +      +AI+LF +MQ  G +P ++T + IL  C +   L+ GK+V A  L +   +
Sbjct: 607 GCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYEL 666

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D  V + LI  YSK      A  VF ++P  DIV WN +IAG + N L   A  F  QM+
Sbjct: 667 DTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQ 726

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           + ++ P +FSF ++L++C+  S+  +G++VHA+I K     D+ VG+ALI MY KCG   
Sbjct: 727 EQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQG 786

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A++ FD +  KN VTWN MI+ YAQ+G   +A+  +  M   G+KPD  TF +IL+AC+
Sbjct: 787 EAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACN 846

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           H+GLV  G +IF+SM+ ++GV P ++HY C++  LGRA  F EAE LI++MP   D  +W
Sbjct: 847 HAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVW 906

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
           E LL +CR+H N+ LA+ AA    +L+ +N A Y LL+N+Y++ GRWDD+  +R +M   
Sbjct: 907 ETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGR 966

Query: 738 CIVKDPAYS 746
            I K+P  S
Sbjct: 967 GIRKEPGRS 975



 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 215/738 (29%), Positives = 364/738 (49%), Gaps = 87/738 (11%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +HA ++   +  D FL N LI +Y KC +      + D                    
Sbjct: 47  KRIHAQMVEAWVGPDIFLSNLLINMYVKCRS------VLD-------------------- 80

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                A+++F EMP R+V+SWN+LIS   + G ++KA  ++ +M N GF+P  IT  S+ 
Sbjct: 81  -----AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISIL 135

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A  +  ++E+G++ H  +IK G  ++  V N+LLS+Y KCG    A  VF  +S  + V
Sbjct: 136 TACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVV 195

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++  M+   A+   V E L +F  M  + +S D V+  ++L            D F    
Sbjct: 196 SYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLL------------DAFTTP- 242

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
              S    G+++H LT++ G  +D+ +  +L+ M  + GD+DSA+  F    +R VV +N
Sbjct: 243 ---SMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYN 299

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------- 348
            +IA   Q   + +A E   RM+S G   +  T +++L AC                   
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359

Query: 349 ----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                            R GD+   RE+F +MP   + SWNA+++ Y++ E+  EA++L+
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLY 419

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           ++MQ  GVKP R T   +LS+CA       GK +H   L++    + ++A+ L+ +Y +C
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRC 479

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
                A+ VF      D++ WNSMIAG + +     A+  F++M+  E+ P   +FA+VL
Sbjct: 480 GSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVL 539

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           S C    +   G+Q+H +I + G   D+ +G+ALI MY +CG +  AR  F  +  ++ +
Sbjct: 540 SGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVM 599

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +W  MI G A  G   +A+ L+  M   G +P   TF +IL  C+ S  +D G ++   +
Sbjct: 600 SWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYI 659

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
            L+ G E        +I    ++G   +A  + D+MP + D V W  +++    +A   L
Sbjct: 660 -LNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSR-DIVSWNKIIAG---YAQNGL 714

Query: 693 AKRAAEELFRLDPKNSAP 710
            + A E  +++  ++  P
Sbjct: 715 GQTAVEFAYQMQEQDVVP 732



 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 190/717 (26%), Positives = 346/717 (48%), Gaps = 84/717 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H+ I++ G   D  + N L+ +Y KC +   A+ +F  +  +D+            
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDV------------ 194

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                              VS+N ++    +    ++ L ++ +MS+EG  P  +T  ++
Sbjct: 195 -------------------VSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINL 235

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A T    ++ G+R H L ++ GL+ +I V  AL+++  +CG    A   F+  ++ + 
Sbjct: 236 LDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDV 295

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + A+++ LA+    VEA E +  M    V+++  +  S+L  C+     +E+      
Sbjct: 296 VVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSK-ALEA------ 348

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ +H    + G  +D+ + N+L+ MYA+ GD+  A  +F  +P+R ++SW
Sbjct: 349 ---------GKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISW 399

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
           N +IAGY ++    +A+ L ++M+S G +P  VT +++L AC                  
Sbjct: 400 NAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILR 459

Query: 350 ------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             R G +   + +F+   +  V SWN+M++ ++Q  +++ A KL
Sbjct: 460 SGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKL 519

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+EMQ   ++PD  T A +LS C     LE GKQ+H    ++   +D  + + LI +Y +
Sbjct: 520 FQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIR 579

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   + A  VFH +   D++ W +MI G +    D++A   F QM+     P + +F+++
Sbjct: 580 CGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSI 639

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L  C   +   +G++V A I   GY  D  VG+ALI  Y K G +  AR+ FD M  ++ 
Sbjct: 640 LKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDI 699

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           V+WN++I GYAQNG G  AV     M    V P+  +FV++L ACS    ++ G  +   
Sbjct: 700 VSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAE 759

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           + +   ++  +     +I    + G   EA+ + D +  + + V W  ++++   H 
Sbjct: 760 I-VKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWNAMINAYAQHG 814



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 164/597 (27%), Positives = 285/597 (47%), Gaps = 89/597 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA  AGKL+H+HI  +G   D  + N LI +Y++C +   A+ LF  MP +D+ SWNAI+
Sbjct: 344 KALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAII 403

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +   + +D                                 +A+ +Y +M +EG  P  +
Sbjct: 404 AGYARRED-------------------------------RGEAMRLYKQMQSEGVKPGRV 432

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T   +  A         G+  H  +++ G+  N ++ANAL+++Y +CG    A  VFE  
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGT 492

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + +++ +M++G A+      A ++F+ M  + +  D+++ +SVL  C          
Sbjct: 493 QARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGC---------- 542

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                 N  +  + G+Q+H    + G + D++L N+L++MY + G +  A  +F +L  R
Sbjct: 543 -----KNPEALEL-GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR 596

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------ 349
            V+SW  MI G   + +  KAIEL  +M++ GF P + T  ++L  C             
Sbjct: 597 DVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVI 656

Query: 350 -----------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  +SG +   RE+FD MPS  + SWN +++ Y+Q+   +
Sbjct: 657 AYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQ 716

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
            A++   +MQ + V P++ +   +L++C++   LE GK+VHA  +K     D  V + LI
Sbjct: 717 TAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALI 776

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y+KC     A+ VF  I E ++V WN+MI   + + L  +A  FF  M +  + P   
Sbjct: 777 SMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGS 836

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY-CKCGDIYGARQF 562
           +F ++LS+C       +G Q+ + +E +  V         IE Y C  G +  AR+F
Sbjct: 837 TFTSILSACNHAGLVLEGYQIFSSMESEYGV------LPTIEHYGCLVGLLGRARRF 887



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 257/496 (51%), Gaps = 39/496 (7%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +++H   ++     D+ LSN L++MY K   +  A  +F  +P R V+SWN +I+ Y Q+
Sbjct: 47  KRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQ 106

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------------------- 349
               KA +L + M++ GF P+++T I++L AC                            
Sbjct: 107 GFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQ 166

Query: 350 --------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                   + GD+   R++F  +    V S+N ML  Y+Q    KE + LF +M   G+ 
Sbjct: 167 NSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGIS 226

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           PD+ T   +L +     +L+ GK++H  +++   + D  V + L+ +  +C   + A++ 
Sbjct: 227 PDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQA 286

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F    + D+V +N++IA L+ +  ++EAF  + +MR + +   + ++ ++L++C+   + 
Sbjct: 287 FKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKAL 346

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G+ +H+ I +DG+ +D+ +G+ALI MY +CGD+  AR+ F  M  ++ ++WN +I GY
Sbjct: 347 EAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGY 406

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           A+     EA+RLYK M + GVKP  +TF+ +L+AC++S     G  I   + L  G++  
Sbjct: 407 ARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI-LRSGIKSN 465

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
                 +++   R G   EA+ + +    + D + W  +++    H +   A +  +E+ 
Sbjct: 466 GHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQ 524

Query: 702 --RLDPKNSAPYSLLA 715
              L+P N    S+L+
Sbjct: 525 NEELEPDNITFASVLS 540



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 191/417 (45%), Gaps = 55/417 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  I  +GL  D  L N LI +Y +C +   A+++F  + H+D+ SW A       
Sbjct: 551 GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTA------- 603

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I      G + KA+ ++ +M NEGF P   T +S+
Sbjct: 604 ------------------------MIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSI 639

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K  T+   ++ G++    ++  G + +  V NAL+S Y+K G    A  VF++M   + 
Sbjct: 640 LKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDI 699

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  +++G A+      A+E    M  + V  +  S  S+L  C+              
Sbjct: 700 VSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACS-------------- 745

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
              FS    G++VH   +K   + D+ +  +L+ MYAK G    A+ +F N+ E++VV+W
Sbjct: 746 --SFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTW 803

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N MI  Y Q   ++KA+     M+  G +PD  T  ++L AC  +G +  G ++F SM S
Sbjct: 804 NAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMES 863

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
                P++  +  ++    ++   +EA  L  +M F    PD      +L +C   G
Sbjct: 864 EYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPF---PPDAAVWETLLGACRIHG 917



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 162/309 (52%), Gaps = 7/309 (2%)

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
           Q R  + +R T   +L +C    +L   K++HA  ++     D ++++ LI +Y KC+  
Sbjct: 19  QPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSV 78

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
             A +VF  +P  D++ WNS+I+  +      +AF  F++M+     P + ++ ++L++C
Sbjct: 79  LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
              +    G+++H+QI K GY  D  V ++L+ MY KCGD+  ARQ F  +  ++ V++N
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            M+  YAQ  Y  E + L+  M + G+ PD +T++ +L A +   ++D G  I + + ++
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRI-HKLTVE 257

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA-NVRLAK 694
            G+   +   T ++    R G    A+        + D V++  L+++   H  NV    
Sbjct: 258 EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADR-DVVVYNALIAALAQHGHNV---- 312

Query: 695 RAAEELFRL 703
            A E+ +R+
Sbjct: 313 EAFEQYYRM 321


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/730 (33%), Positives = 400/730 (54%), Gaps = 53/730 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D + W ++++   K     +A  +  +MP+R+VVSW  LI  LV  G    ++ ++ +M 
Sbjct: 146 DSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQ 205

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           NEG +P   TLA+  KA +  + ++ G++ H    K+GL  +++V +AL+ LYAKCG  +
Sbjct: 206 NEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIE 265

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +F  M E N+VT+  +++G A+   V   L++F  M+   V  +  +L++VL  CA
Sbjct: 266 LASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCA 325

Query: 233 REGCGVESDVFAQSDNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
                             S+N+  GQ +H L IK G+E +  +   L+DMY+K G    A
Sbjct: 326 N-----------------SKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDA 368

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK--------------------- 330
             +F  + +  +V W+ +I    Q+ QS ++I+L   M+                     
Sbjct: 369 IGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNT 428

Query: 331 ----------SC----GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                     +C    GFE D   S  ++   +++G +  G ++++SM    + SWNA L
Sbjct: 429 GNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYL 488

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           S       +   + +F  M   G  P+  T   IL SC+ +  +  G+QVHA  +K    
Sbjct: 489 SGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLD 548

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            +N+V + LI +Y+KC   E A+  F+R+   D+  W  +I   +  +   +A  +F+QM
Sbjct: 549 DNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQM 608

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           +Q  + P +F+ A  LS C+ L+S   G+Q+H+ + K G+V+D+FVGSAL++MY KCG +
Sbjct: 609 QQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCM 668

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             A   F+ +  ++T+ WN +I GYAQNG G++A+  ++ M+  G+ PD +TF  IL+AC
Sbjct: 669 EEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSAC 728

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH GLV+ G E FNSM  D G+ P +DH  CM+D LGR G F E E  I +M    + +I
Sbjct: 729 SHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALI 788

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           WE +L + ++H N+ L ++AA +LF L P+  + Y LL+NI+++ GRWDD++ VR LMS 
Sbjct: 789 WETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSS 848

Query: 737 NCIVKDPAYS 746
             + K+P  S
Sbjct: 849 KGVKKEPGCS 858



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 145/574 (25%), Positives = 281/574 (48%), Gaps = 53/574 (9%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           HGL++K  ++ + ++  +L+++YAKC ++ +A  V  +M + + V++TA++ GL      
Sbjct: 135 HGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFA 194

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            +++ +F+ M  + +  +  +L++ L  C+     +  D+             G+Q+H  
Sbjct: 195 NDSIYLFQEMQNEGIMPNEFTLATGLKACS---LCMALDL-------------GKQMHAQ 238

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
             KLG   DL + ++L+D+YAK G+++ A  +F  +PE++ V+WNV++ GY Q+   T  
Sbjct: 239 AFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGV 298

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------------------------ 358
           ++L   M     + +E T   +L  C  S ++K G+                        
Sbjct: 299 LKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDM 358

Query: 359 -----------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
                       +F ++  P +  W+A+++   Q    +E+IKLF  M+     P++ T+
Sbjct: 359 YSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTI 418

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
             +LS+    G L+ G+ +HA   K     D  V++ L+ +Y K        +++  + +
Sbjct: 419 CSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVD 478

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            D++ WN+ ++GL    +       F  M +    P  ++F ++L SC+ L     GRQV
Sbjct: 479 RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQV 538

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           HA I K+   ++ FV +ALI+MY KC  +  A   F+ +  ++  TW  +I  YAQ   G
Sbjct: 539 HAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQG 598

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
           ++A+  ++ M   GVKP++ T    L+ CS    ++ G ++ +SM    G    +   + 
Sbjct: 599 EKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL-HSMVFKSGHVSDMFVGSA 657

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           ++D   + G   EAE L + +  + D + W  ++
Sbjct: 658 LVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/609 (24%), Positives = 278/609 (45%), Gaps = 84/609 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA   + GL  D F+ + L++LY+KC     A  +F  MP ++  +WN +L+   +
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQ 291

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+    KLF  M E +V                           NE       TL +V
Sbjct: 292 RGDVTGVLKLFCSMMELDV-------------------------KCNE------FTLTTV 320

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K      +++ G+  H L+IK G + N ++   L+ +Y+KCG    A+ VF+ + +P+ 
Sbjct: 321 LKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDI 380

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V ++A+++ L +  +  E++++F LM       +  ++ S+L      G           
Sbjct: 381 VVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTG----------- 429

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   +GQ +H    K GFE D+ +SN+L+ MY KNG +     ++ ++ +R ++SW
Sbjct: 430 -----NLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISW 484

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N  ++G        + + +   M   GF P+  T I++L +C    D+  GR++      
Sbjct: 485 NAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIK 544

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F+ +    + +W  ++++Y+Q+   ++A+  
Sbjct: 545 NQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNY 604

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           FR+MQ  GVKP+  TLA  LS C+++  LE G+Q+H+   K+    D +V S L+ +Y+K
Sbjct: 605 FRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAK 664

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E AE +F  +   D + WN++I G + N    +A   F+ M    + P   +F  +
Sbjct: 665 CGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGI 724

Query: 512 LSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH-GK 569
           LS+C+      +G++    + +D G    +   + ++++  + G       F   M   +
Sbjct: 725 LSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQ 784

Query: 570 NTVTWNEMI 578
           N + W  ++
Sbjct: 785 NALIWETVL 793



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 227/495 (45%), Gaps = 50/495 (10%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
            + +H L +K     D HL  SL+++YAK      A ++ + +P+R VVSW  +I G   
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------------- 348
           +  +  +I L Q M++ G  P+E T    L AC                           
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV 250

Query: 349 --------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                    + G+I+   +MF  MP  +  +WN +L+ Y+Q  +    +KLF  M    V
Sbjct: 251 GSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDV 310

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           K +  TL  +L  CA    L+ G+ +H+  +K     + ++  GL+ +YSKC     A  
Sbjct: 311 KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIG 370

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           VF  I + DIV W+++I  L       E+   F  MR  +  P Q++  ++LS+     +
Sbjct: 371 VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGN 430

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G+ +HA + K G+  D+ V +AL+ MY K G ++   + ++ M  ++ ++WN  + G
Sbjct: 431 LQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSG 490

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM---QLDHG 637
               G  D  + ++  M+  G  P+  TF++IL +CS    V  G ++   +   QLD  
Sbjct: 491 LHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDD- 549

Query: 638 VEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
                +++ C  +ID   +  +  +A++  + +  + D   W V++++   +A     ++
Sbjct: 550 -----NNFVCTALIDMYAKCMYLEDADVAFNRLSVR-DLFTWTVIITN---YAQTNQGEK 600

Query: 696 AAEELFRLDPKNSAP 710
           A     ++  +   P
Sbjct: 601 ALNYFRQMQQEGVKP 615



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 148/273 (54%), Gaps = 2/273 (0%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L  CA+   L   K +H   +K   + D+++   L+ +Y+KC+ +  A  V  ++P+ D
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W ++I GL       ++   F++M+   + P +F+ AT L +C+   +   G+Q+HA
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHA 237

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
           Q  K G + D+FVGSAL+++Y KCG+I  A + F  M  +N VTWN +++GYAQ G    
Sbjct: 238 QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTG 297

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
            ++L+  M+   VK ++ T   +L  C++S  +  G ++ +S+ +  G E        ++
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYEGNEFIGCGLV 356

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D   + G   +A  +   +  K D V+W  L++
Sbjct: 357 DMYSKCGLAIDAIGVFKTIK-KPDIVVWSALIT 388



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 6/201 (2%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           ++++L  CA   S    + +H  I KD    D  +  +L+ +Y KC     AR     M 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ V+W  +I G    G+ ++++ L+++M   G+ P++ T    L ACS    +D+G +
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 628 IFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
           + ++     G+  +LD +  + ++D   + G    A  +   MP ++D V W VLL+   
Sbjct: 235 M-HAQAFKLGL--LLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND-VTWNVLLNGYA 290

Query: 686 LHANVRLAKRAAEELFRLDPK 706
              +V    +    +  LD K
Sbjct: 291 QRGDVTGVLKLFCSMMELDVK 311


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/730 (33%), Positives = 400/730 (54%), Gaps = 53/730 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D + W ++++   K     +A  +  +MP+R+VVSW  LI  LV  G    ++ ++ +M 
Sbjct: 146 DSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQ 205

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           NEG +P   TLA+  KA +  + ++ G++ H    K+GL  +++V +AL+ LYAKCG  +
Sbjct: 206 NEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIE 265

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +F  M E N+VT+  +++G A+   V   L++F  M+   V  +  +L++VL  CA
Sbjct: 266 LASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCA 325

Query: 233 REGCGVESDVFAQSDNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
                             S+N+  GQ +H L IK G+E +  +   L+DMY+K G    A
Sbjct: 326 N-----------------SKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDA 368

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK--------------------- 330
             +F  + +  +V W+ +I    Q+ QS ++I+L   M+                     
Sbjct: 369 IGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNT 428

Query: 331 ----------SC----GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                     +C    GFE D   S  ++   +++G +  G ++++SM    + SWNA L
Sbjct: 429 GNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYL 488

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           S       +   + +F  M   G  P+  T   IL SC+ +  +  G+QVHA  +K    
Sbjct: 489 SGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLD 548

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            +N+V + LI +Y+KC   E A+  F+R+   D+  W  +I   +  +   +A  +F+QM
Sbjct: 549 DNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQM 608

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           +Q  + P +F+ A  LS C+ L+S   G+Q+H+ + K G+V+D+FVGSAL++MY KCG +
Sbjct: 609 QQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCM 668

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             A   F+ +  ++T+ WN +I GYAQNG G++A+  ++ M+  G+ PD +TF  IL+AC
Sbjct: 669 EEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSAC 728

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH GLV+ G E FNSM  D G+ P +DH  CM+D LGR G F E E  I +M    + +I
Sbjct: 729 SHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALI 788

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           WE +L + ++H N+ L ++AA +LF L P+  + Y LL+NI+++ GRWDD++ VR LMS 
Sbjct: 789 WETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSS 848

Query: 737 NCIVKDPAYS 746
             + K+P  S
Sbjct: 849 KGVKKEPGCS 858



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 145/574 (25%), Positives = 281/574 (48%), Gaps = 53/574 (9%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           HGL++K  ++ + ++  +L+++YAKC ++ +A  V  +M + + V++TA++ GL      
Sbjct: 135 HGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFA 194

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            +++ +F+ M  + +  +  +L++ L  C+     +  D+             G+Q+H  
Sbjct: 195 NDSIYLFQEMQNEGIMPNEFTLATGLKACS---LCMALDL-------------GKQMHAQ 238

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
             KLG   DL + ++L+D+YAK G+++ A  +F  +PE++ V+WNV++ GY Q+   T  
Sbjct: 239 AFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGV 298

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------------------------ 358
           ++L   M     + +E T   +L  C  S ++K G+                        
Sbjct: 299 LKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDM 358

Query: 359 -----------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
                       +F ++  P +  W+A+++   Q    +E+IKLF  M+     P++ T+
Sbjct: 359 YSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTI 418

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
             +LS+    G L+ G+ +HA   K     D  V++ L+ +Y K        +++  + +
Sbjct: 419 CSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVD 478

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            D++ WN+ ++GL    +       F  M +    P  ++F ++L SC+ L     GRQV
Sbjct: 479 RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQV 538

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           HA I K+   ++ FV +ALI+MY KC  +  A   F+ +  ++  TW  +I  YAQ   G
Sbjct: 539 HAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQG 598

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
           ++A+  ++ M   GVKP++ T    L+ CS    ++ G ++ +SM    G    +   + 
Sbjct: 599 EKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL-HSMVFKSGHVSDMFVGSA 657

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           ++D   + G   EAE L + +  + D + W  ++
Sbjct: 658 LVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/609 (24%), Positives = 278/609 (45%), Gaps = 84/609 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA   + GL  D F+ + L++LY+KC     A  +F  MP ++  +WN +L+   +
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQ 291

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+    KLF  M E +V                           NE       TL +V
Sbjct: 292 RGDVTGVLKLFCSMMELDV-------------------------KCNE------FTLTTV 320

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K      +++ G+  H L+IK G + N ++   L+ +Y+KCG    A+ VF+ + +P+ 
Sbjct: 321 LKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDI 380

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V ++A+++ L +  +  E++++F LM       +  ++ S+L      G           
Sbjct: 381 VVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTG----------- 429

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   +GQ +H    K GFE D+ +SN+L+ MY KNG +     ++ ++ +R ++SW
Sbjct: 430 -----NLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISW 484

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N  ++G        + + +   M   GF P+  T I++L +C    D+  GR++      
Sbjct: 485 NAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIK 544

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F+ +    + +W  ++++Y+Q+   ++A+  
Sbjct: 545 NQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNY 604

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           FR+MQ  GVKP+  TLA  LS C+++  LE G+Q+H+   K+    D +V S L+ +Y+K
Sbjct: 605 FRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAK 664

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E AE +F  +   D + WN++I G + N    +A   F+ M    + P   +F  +
Sbjct: 665 CGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGI 724

Query: 512 LSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH-GK 569
           LS+C+      +G++    + +D G    +   + ++++  + G       F   M   +
Sbjct: 725 LSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQ 784

Query: 570 NTVTWNEMI 578
           N + W  ++
Sbjct: 785 NALIWETVL 793



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 227/495 (45%), Gaps = 50/495 (10%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
            + +H L +K     D HL  SL+++YAK      A ++ + +P+R VVSW  +I G   
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------------- 348
           +  +  +I L Q M++ G  P+E T    L AC                           
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV 250

Query: 349 --------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                    + G+I+   +MF  MP  +  +WN +L+ Y+Q  +    +KLF  M    V
Sbjct: 251 GSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDV 310

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           K +  TL  +L  CA    L+ G+ +H+  +K     + ++  GL+ +YSKC     A  
Sbjct: 311 KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIG 370

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           VF  I + DIV W+++I  L       E+   F  MR  +  P Q++  ++LS+     +
Sbjct: 371 VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGN 430

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G+ +HA + K G+  D+ V +AL+ MY K G ++   + ++ M  ++ ++WN  + G
Sbjct: 431 LQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSG 490

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM---QLDHG 637
               G  D  + ++  M+  G  P+  TF++IL +CS    V  G ++   +   QLD  
Sbjct: 491 LHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDD- 549

Query: 638 VEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
                +++ C  +ID   +  +  +A++  + +  + D   W V++++   +A     ++
Sbjct: 550 -----NNFVCTALIDMYAKCMYLEDADVAFNRLSVR-DLFTWTVIITN---YAQTNQGEK 600

Query: 696 AAEELFRLDPKNSAP 710
           A     ++  +   P
Sbjct: 601 ALNYFRQMQQEGVKP 615



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 148/273 (54%), Gaps = 2/273 (0%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L  CA+   L   K +H   +K   + D+++   L+ +Y+KC+ +  A  V  ++P+ D
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W ++I GL       ++   F++M+   + P +F+ AT L +C+   +   G+Q+HA
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHA 237

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
           Q  K G + D+FVGSAL+++Y KCG+I  A + F  M  +N VTWN +++GYAQ G    
Sbjct: 238 QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTG 297

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
            ++L+  M+   VK ++ T   +L  C++S  +  G ++ +S+ +  G E        ++
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYEGNEFIGCGLV 356

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D   + G   +A  +   +  K D V+W  L++
Sbjct: 357 DMYSKCGLAIDAIGVFKTIK-KPDIVVWSALIT 388



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 6/201 (2%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           ++++L  CA   S    + +H  I KD    D  +  +L+ +Y KC     AR     M 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ V+W  +I G    G+ ++++ L+++M   G+ P++ T    L ACS    +D+G +
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 628 IFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
           + ++     G+  +LD +  + ++D   + G    A  +   MP ++D V W VLL+   
Sbjct: 235 M-HAQAFKLGL--LLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND-VTWNVLLNGYA 290

Query: 686 LHANVRLAKRAAEELFRLDPK 706
              +V    +    +  LD K
Sbjct: 291 QRGDVTGVLKLFCSMMELDVK 311


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/815 (31%), Positives = 423/815 (51%), Gaps = 93/815 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA------- 59
           G+ +H  ++++G     F    L+++Y+KC +  +A+ +FD +   D   W++       
Sbjct: 177 GRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHR 236

Query: 60  ----------------------------ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
                                       I+S    S  L+ A  L  +MP  + V+WN +
Sbjct: 237 VGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAV 296

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           IS   ++GLE   L +Y  M + G  PT  T AS+  A+  +     G++ H   +  GL
Sbjct: 297 ISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGL 356

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D N++V ++L++LYAKCG    A  VF+   E N V + AM++G  + +   EA+ MF+ 
Sbjct: 357 DANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQY 416

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M+R  +  D  +  S+LG C                   S    G+QVHC+TIK   +  
Sbjct: 417 MMRYTLQTDEFTFVSILGAC----------------TYLSSFYLGKQVHCVTIKNCMDIS 460

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L ++N+ LDMY+K G +  A+ +FS +P +  +SWN +  G  Q  +  +A+ +L+RM+ 
Sbjct: 461 LFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRL 520

Query: 332 CGFEPDEVTSINMLVACV-----------------------------------RSGDIKT 356
            G  PD+V+    + AC                                    + GD+++
Sbjct: 521 HGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVES 580

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R++F  + + S+   NA+++ + Q+ N  EAI+LF+++   G+KP   T + ILS C+ 
Sbjct: 581 SRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS- 639

Query: 417 MGILES--GKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERVFHRIPE-LDIVC 472
            G L S  GKQVH  +LK+   + D  +   L GIY K +  E A ++   +P+  ++  
Sbjct: 640 -GSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE 698

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           W ++I+G + N     + + F +MR   +   + +FA+VL +C+ +++   G+++H  I 
Sbjct: 699 WTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLIT 758

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAV 591
           K G+ +     SALI+MY KCGD+  + + F  +  K  +  WN MI G+A+NGY DEA+
Sbjct: 759 KSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEAL 818

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
            L++ M    +KPD++TF+ +L AC+HSGL+  G   F  M+  +G+ P LDHY C ID 
Sbjct: 819 LLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDL 878

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           LGR GH  EA+  ID++P + D V+W   L++CR+H +    K AA +L  L+P+ S+ Y
Sbjct: 879 LGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTY 938

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LL++++++ G W + +  RE M E  + K P  S
Sbjct: 939 VLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCS 973



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 258/500 (51%), Gaps = 18/500 (3%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           R  HG +++ G      + ++L+ LY K G   +A        E      ++++S  A++
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 200 DRVVEALEMFRLMIRKAVS-IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
               + L  FR +   A    D   L+ VL  C+R G      V A          +G+Q
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVG------VLA----------YGRQ 179

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           VHC  +K GF + +    +L+DMYAK GD+ +A  +F  +     + W+ MIA Y +   
Sbjct: 180 VHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGC 239

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
             +A+ L  RM   G  PD+VT + ++     SG +     +   MP+PS  +WNA++S 
Sbjct: 240 YQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISG 299

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           ++QS      + L+++M+  G+ P R+T A +LS+ A M     G+Q+HAA++      +
Sbjct: 300 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 359

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
            +V S LI +Y+KC     A+ VF    E +IV WN+M+ G   N L  EA   F+ M +
Sbjct: 360 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 419

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
             +   +F+F ++L +C  LSS + G+QVH    K+     +FV +A ++MY K G I  
Sbjct: 420 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGD 479

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A+  F ++  K++++WN +  G AQN   +EAV + K M   G+ PDD++F   + ACS+
Sbjct: 480 AKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSN 539

Query: 619 SGLVDVGVEIFNSMQLDHGV 638
               + G +I + + + +G+
Sbjct: 540 IRATETGKQI-HCLAIKYGI 558



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 175/712 (24%), Positives = 320/712 (44%), Gaps = 89/712 (12%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGF 116
           ++++   CKS  + +A+       ER   + ++L+S   R+G     L  +  +    G 
Sbjct: 95  DSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGG 154

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
            P    LA V  A + +  + +GR+ H  V+K G   +++   AL+ +YAKCG   +A  
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG- 235
           VF+ ++ P+ + +++M++   +     EAL +F  M +   + D V+L +++   A  G 
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 274

Query: 236 ----------------------------CGVESDVFAQSDNKFSRN-------------- 253
                                        G+E +V     +  S                
Sbjct: 275 LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSA 334

Query: 254 -------VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                  V GQQ+H   +  G +A++ + +SL+++YAK G    A+ +F    E+++V W
Sbjct: 335 AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMW 394

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
           N M+ G+ Q     +AI + Q M     + DE T +++L AC                  
Sbjct: 395 NAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 454

Query: 350 ------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G I   + +F  +P     SWNA+    +Q+   +EA+ +
Sbjct: 455 NCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCM 514

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
            + M+  G+ PD  + +  +++C+ +   E+GKQ+H  ++K     ++ V S LI +YSK
Sbjct: 515 LKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSK 574

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
               E + ++F ++    IV  N++IAG   N+ + EA   F+Q+ ++ + P+  +F+++
Sbjct: 575 HGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSI 634

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQFF-DMMHGK 569
           LS C+   +S  G+QVH    K G + +D  +G +L  +Y K   +  A +   +M   K
Sbjct: 635 LSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHK 694

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           N   W  +I GYAQNGYGD ++  +  M    V+ D+ TF ++L ACS       G EI 
Sbjct: 695 NLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI- 753

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           + +    G        + +ID   + G    +     E+  K D + W  ++
Sbjct: 754 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 150/570 (26%), Positives = 258/570 (45%), Gaps = 85/570 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA V G+ +HA  + +GL  + F+ + LI LY+KC     A+++FD    K+I  WNA+L
Sbjct: 339 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 398

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                          +  V+N L E+A+ ++  M          
Sbjct: 399 -------------------------------TGFVQNELPEEAIRMFQYMMRYTLQTDEF 427

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  S+  A T L     G++ H + IK  +D +++VANA L +Y+K G    A  +F  +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + +++ A+  GLA+     EA+ M + M    ++ D VS S+ +  C        S+
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC--------SN 539

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           + A           G+Q+HCL IK G  ++  + +SL+D+Y+K+GD++S+  IF+ +   
Sbjct: 540 IRATET--------GKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDAS 591

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-- 359
           S+V  N +IAG+ Q     +AI+L Q++   G +P  VT  ++L  C  S +   G++  
Sbjct: 592 SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVH 651

Query: 360 ----------------------------------MFDSMPS-PSVSSWNAMLSSYSQSEN 384
                                             +   MP   ++  W A++S Y+Q+  
Sbjct: 652 CYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGY 711

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
              ++  F  M+   V+ D  T A +L +C+ +     GK++H    K+         S 
Sbjct: 712 GDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSA 771

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           LI +YSKC     +   F  +  + DI+ WNSMI G + N    EA + F++M + ++ P
Sbjct: 772 LIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKP 831

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
            + +F  VL +C       +GR     + K
Sbjct: 832 DEVTFLGVLIACTHSGLISEGRHFFGPMRK 861


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/729 (32%), Positives = 395/729 (54%), Gaps = 52/729 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           DI+ WN ++S   K  +   A ++FDEMP+++V SWN L+   V++   E+A  ++ +M 
Sbjct: 138 DIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMV 197

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            +G  P   T   +  A     +V+ G     L++  G D +++V  AL++++ KCG   
Sbjct: 198 QDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVD 257

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A+ VF  +   + +T+T+M++GLA+  +  +A  +F++M  + V  D V+  S+L  C 
Sbjct: 258 DALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKAC- 316

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                          N       G++VH    ++G + ++++  +LL MY K G M+ A 
Sbjct: 317 ---------------NHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDAL 361

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F+ +  R+VVSW  MIAG+ Q  +  +A     +M   G EP+ VT +++L AC R  
Sbjct: 362 EVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPS 421

Query: 353 DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
            +K GR++                                   F+ +   +V +WNAM++
Sbjct: 422 ALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMIT 481

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
           +Y Q E +  A+  F+ +   G+KPD +T   IL+ C +   LE GK V +  ++     
Sbjct: 482 AYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFES 541

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D ++ + L+ ++  C     A  +F+ +PE D+V WN++IAG   +  +  AF +FK M+
Sbjct: 542 DLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQ 601

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           ++ + P Q +F  +L++CA   +  +GR++HA I +     D+ VG+ LI MY KCG I 
Sbjct: 602 ESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSID 661

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A   F  +  KN  +W  MI GYAQ+G G EA+ L+  M   GVKPD ITFV  L+AC+
Sbjct: 662 DAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACA 721

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           H+GL+  G+  F SM+ D  +EP ++HY CM+D  GRAG  HEA   I++M  K D  +W
Sbjct: 722 HAGLIKEGLHHFESMK-DFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLW 780

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
             LL +C++H +V LA++ A++   LDP +   Y +L+NIY++ G W ++  +R++M + 
Sbjct: 781 GALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDR 840

Query: 738 CIVKDPAYS 746
            +VK P  S
Sbjct: 841 GVVKKPGQS 849



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/664 (24%), Positives = 309/664 (46%), Gaps = 58/664 (8%)

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
           +N    N  ++ L + G   +A+ V   + +        T +S+ +      ++  G R 
Sbjct: 67  KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H  +    +  +I++ N L+S+YAKCG T  A  +F+EM + +  ++  ++ G  +  R 
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV-HGQQVHC 261
            EA  +   M++  V  D  +   +L  CA                  ++NV  G ++  
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACAD-----------------AKNVDKGGELFS 229

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
           L +  G++ DL +  +L++M+ K G +D A  +F+NLP R +++W  MI G  +  Q  +
Sbjct: 230 LILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQ 289

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVAC--------------------------------- 348
           A  L Q M+  G +PD+V  +++L AC                                 
Sbjct: 290 ACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLS 349

Query: 349 --VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
              + G ++   E+F+ +   +V SW AM++ ++Q    +EA   F +M   G++P+R T
Sbjct: 350 MYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVT 409

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
              IL +C+    L+ G+Q+H   +K     D+ V + L+ +Y+KC     A  VF RI 
Sbjct: 410 FMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS 469

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
           + ++V WN+MI     +     A   F+ + +  + P   +F ++L+ C    +   G+ 
Sbjct: 470 KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKW 529

Query: 527 VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           V + I + G+ +D+ + +AL+ M+  CGD+  A   F+ M  ++ V+WN +I G+ Q+G 
Sbjct: 530 VQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGE 589

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
              A   +K M  SGVKPD ITF  +L AC+    +  G  + +++  +  ++  +   T
Sbjct: 590 NQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRL-HALITEAALDCDVVVGT 648

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK 706
            +I    + G   +A ++   +P K +   W  +++    H      K A E   ++  +
Sbjct: 649 GLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQHGR---GKEALELFCQMQQE 704

Query: 707 NSAP 710
              P
Sbjct: 705 GVKP 708



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 218/403 (54%), Gaps = 10/403 (2%)

Query: 329 MKSCGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
           +K    +PD +   NML++   + G+  + +++FD MP   V SWN +L  Y Q   ++E
Sbjct: 130 IKFSKIQPD-IFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEE 188

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A +L  +M   GVKPD+ T   +L++CA    ++ G ++ +  L      D +V + LI 
Sbjct: 189 AFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALIN 248

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           ++ KC   + A +VF+ +P  D++ W SMI GL+ +    +A   F+ M +  + P + +
Sbjct: 249 MHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVA 308

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           F ++L +C    +  QG++VHA++++ G   +I+VG+AL+ MY KCG +  A + F+++ 
Sbjct: 309 FVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVK 368

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
           G+N V+W  MI G+AQ+G  +EA   +  MI SG++P+ +TF++IL ACS    +  G +
Sbjct: 369 GRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQ 428

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           I + + +  G        T ++    + G   +A  + + +  K + V W  ++++   H
Sbjct: 429 IHDRI-IKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITAYVQH 486

Query: 688 ANVRLAKRAAEELFRLDPK-NSAPYSLLANIYSS-----LGRW 724
                A    + L +   K +S+ ++ + N+  S     LG+W
Sbjct: 487 EKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKW 529



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 4/121 (3%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   G+ LHA I    L  D  +   LI +Y+KC +   A  +F  +P K++YSW +++
Sbjct: 623 EALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMI 682

Query: 62  SAQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +   +    + A +LF +M +  V    +++   +SA    GL ++ L  +  M +    
Sbjct: 683 TGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIE 742

Query: 118 P 118
           P
Sbjct: 743 P 743


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/779 (32%), Positives = 410/779 (52%), Gaps = 92/779 (11%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K++H  I+ +GL  DTFL N LI + SK                               S
Sbjct: 47  KIIHGQIIVSGLQSDTFLANILINVCSK-------------------------------S 75

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLASV 126
           D ++ A  +FD+MP +N+++W++++S   + G  E+AL V+  +  + G  P    LASV
Sbjct: 76  DRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASV 135

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A T L  VE G + HG V++ G D+++YV  +L+  Y+K G  + A  VF+++SE   
Sbjct: 136 IRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTA 195

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR----EGCGVESDV 242
           VT+T +++G  K  R   +LE+F  M    V  D   +SSVL  C+     EG       
Sbjct: 196 VTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG------- 248

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+Q+H   ++ G E D+ + N L+D Y K   + +   +F  +  ++
Sbjct: 249 -------------GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKN 295

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-- 360
           ++SW  MI+GY Q     +A++L   M   G++PD     ++L +C     ++ GR++  
Sbjct: 296 IISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHA 355

Query: 361 ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                            FD M   +V S+NAM+  YS  E   E
Sbjct: 356 YTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSE 415

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A++LF EM+ R   P   T   +L   A++  LE  KQ+H   +K    +D +  S LI 
Sbjct: 416 ALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALID 475

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +YSKC   + A  VF  + E DIV WN+M  G + +  + EA   +  ++ +   P +F+
Sbjct: 476 VYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFT 535

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           FA ++++ + L+S   G+Q H Q+ K G     FV +AL++MY KCG I  AR+ F+   
Sbjct: 536 FAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSI 595

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ V WN MI  +AQ+G  +EA+ ++++M+  G++P+ +TFVA+L+ACSH+G V+ G+ 
Sbjct: 596 WRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLN 655

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            FNSM    G++P  +HY C++  LGR+G   EA+  I++MP +   ++W  LLS+CR+ 
Sbjct: 656 HFNSMP-GFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIA 714

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            NV L K AAE     DPK+S  Y LL+NI++S G W D++ VR+ M  + +VK+P  S
Sbjct: 715 GNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRS 773



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 188/647 (29%), Positives = 319/647 (49%), Gaps = 57/647 (8%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P     A++ + S +   + H +  HG +I  GL  + ++AN L+++ +K     +A  V
Sbjct: 25  PKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVV 84

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS-IDSVSLSSVLGVCAREGC 236
           F++M   N +T+++M+S  ++     EAL +F  + RK+    +   L+SV+  C + G 
Sbjct: 85  FDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGV 144

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
            VE                G Q+H   ++ GF+ D+++  SL+D Y+KNG+++ A ++F 
Sbjct: 145 -VEK---------------GAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFD 188

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------- 348
            L E++ V+W  +IAGY +  +S  ++EL  +M+     PD     ++L AC        
Sbjct: 189 QLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG 248

Query: 349 --------VRSGD-------------------IKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                   +R G                    +K GR++FD M   ++ SW  M+S Y Q
Sbjct: 249 GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ 308

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +    EA+KLF EM   G KPD      +L+SC +   LE G+QVHA ++K     D +V
Sbjct: 309 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFV 368

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            +GLI +Y+K      A++VF  + E +++ +N+MI G S      EA   F +MR    
Sbjct: 369 KNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLF 428

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P+  +F ++L   A L +    +Q+H  I K G   D+F GSALI++Y KC  +  AR 
Sbjct: 429 PPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARH 488

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F+ M+ K+ V WN M  GY Q+   +EA++LY  +  S  KP++ TF A++TA S+   
Sbjct: 489 VFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLAS 548

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           +  G +  N + +  G++        ++D   + G   EA  + +    + D V W  ++
Sbjct: 549 LRHGQQFHNQL-VKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWR-DVVCWNSMI 606

Query: 682 SSCRLHANVRLAKRAAEELFR--LDPKNSAPYSLLANIYSSLGRWDD 726
           S+   H     A     E+ +  + P N   +  + +  S  GR +D
Sbjct: 607 STHAQHGEAEEALGMFREMMKEGIQP-NYVTFVAVLSACSHAGRVED 652



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 153/596 (25%), Positives = 268/596 (44%), Gaps = 84/596 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH  ++R+G   D ++   LI+ YSK  N   A+ +FD++  K   +W  I++   K
Sbjct: 148 GAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTK 207

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 + +LF +M E NV                               VP    ++SV
Sbjct: 208 CGRSAVSLELFAQMRETNV-------------------------------VPDRYVVSSV 236

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + L  +E G++ H  V++ G + ++ V N L+  Y KC   K    +F++M   N 
Sbjct: 237 LSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNI 296

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC-AREGCGVESDVFAQ 245
           +++T M+SG  +     EA+++F  M R     D  + +SVL  C +RE           
Sbjct: 297 ISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE-------- 348

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+QVH  TIK   E+D  + N L+DMYAK+  +  A+ +F  + E++V+S
Sbjct: 349 ---------QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVIS 399

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           +N MI GY  + + ++A+EL   M+   F P  +T +++L                    
Sbjct: 400 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII 459

Query: 350 -------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              +   +K  R +F+ M    +  WNAM   Y+Q   ++EA+K
Sbjct: 460 KFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALK 519

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           L+  +QF   KP+  T A ++++ + +  L  G+Q H   +K       +V + L+ +Y+
Sbjct: 520 LYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYA 579

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   E A ++F+     D+VCWNSMI+  + +    EA   F++M +  + P   +F  
Sbjct: 580 KCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVA 639

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           VLS+C+       G      +   G        + ++ +  + G ++ A++F + M
Sbjct: 640 VLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKM 695



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 211/453 (46%), Gaps = 82/453 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +HA++LR G   D  + N LI+ Y+KCN   + + LFD+M  K+I SW        
Sbjct: 248 GGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISW-------- 299

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    +IS  ++N  + +A+ ++ +M+  G+ P      S
Sbjct: 300 -----------------------TTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTS 336

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  +  +   +E GR+ H   IK  L+ + +V N L+ +YAK      A  VF+ M+E N
Sbjct: 337 VLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQN 396

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++ AM+ G +  +++ EALE+F  M  +      ++  S+LGV A         +FA 
Sbjct: 397 VISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSA--------SLFAL 448

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
             +K        Q+H L IK G   DL   ++L+D+Y+K   +  A  +F  + E+ +V 
Sbjct: 449 ELSK--------QIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVV 500

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN M  GY Q  ++ +A++L   ++    +P+E T   ++ A                  
Sbjct: 501 WNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLV 560

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G I+  R+MF+S     V  WN+M+S+++Q    +EA+ 
Sbjct: 561 KMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALG 620

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +FREM   G++P+  T   +LS+C+  G +E G
Sbjct: 621 MFREMMKEGIQPNYVTFVAVLSACSHAGRVEDG 653



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 210/437 (48%), Gaps = 54/437 (12%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++A   G+ +HA+ ++  L  D F+ N LI++Y+K N    A+ +FD M  +++ S+NA+
Sbjct: 344 REALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAM 403

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +      + L  A +LF EM  R                                F P+ 
Sbjct: 404 IEGYSSQEKLSEALELFHEMRVRL-------------------------------FPPSL 432

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           +T  S+   S +L  +E  ++ HGL+IK G+  +++  +AL+ +Y+KC + K A  VFEE
Sbjct: 433 LTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEE 492

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M+E + V + AM  G  +     EAL+++  +       +  + ++++   +        
Sbjct: 493 MNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAAS-------- 544

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                     +   HGQQ H   +K+G +    ++N+L+DMYAK G ++ A  +F++   
Sbjct: 545 --------NLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIW 596

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           R VV WN MI+ + Q  ++ +A+ + + M   G +P+ VT + +L AC  +G ++ G   
Sbjct: 597 RDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNH 656

Query: 361 FDSMPS----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           F+SMP     P    +  ++S   +S    EA +   +M    ++P       +LS+C  
Sbjct: 657 FNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMP---IEPAAIVWRSLLSACRI 713

Query: 417 MGILESGKQVHAASLKT 433
            G +E GK     ++ T
Sbjct: 714 AGNVELGKYAAEMAIST 730



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 3/289 (1%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +Q   ++P R   A +L    +   +   K +H   + +    D ++A+ LI + SK  R
Sbjct: 18  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLS 513
            + A  VF ++P  +++ W+SM++  S      EA M F  + R++  +P +F  A+V+ 
Sbjct: 78  VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 137

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           +C +L    +G Q+H  + + G+  D++VG++LI+ Y K G+I  AR  FD +  K  VT
Sbjct: 138 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVT 197

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W  +I GY + G    ++ L+  M  + V PD     ++L+ACS    ++ G +I ++  
Sbjct: 198 WTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQI-HAYV 256

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           L  G E  +     +ID   +         L D+M  K + + W  ++S
Sbjct: 257 LRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVK-NIISWTTMIS 304


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/781 (31%), Positives = 410/781 (52%), Gaps = 51/781 (6%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           + A   G+  HA +L +G    TF+ N L+++Y++C  T  A  +FD MPH+D  SWN +
Sbjct: 32  RSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTM 91

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L+A   + D + A  LF  MP+ +VVSWN LIS   ++G+   ++ +  +MS  G     
Sbjct: 92  LTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDR 151

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            TLA + K+   L D+  G + H L +K GL+ ++   +AL+ +Y KC     A+  F  
Sbjct: 152 TTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHG 211

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M E N V++ A ++G  + ++    +E+F  M R  + +   + +S    CA   C   +
Sbjct: 212 MGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTA 271

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                           +Q+H   IK  F +D  +  +++D+YAK G++  A   F  LP 
Sbjct: 272 ----------------RQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPH 315

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------V 349
            +V + N M+ G  +     +A++L Q M   G   D ++   +  AC           V
Sbjct: 316 HNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQV 375

Query: 350 RSGDIKTGRE------------------------MFDSMPSPSVSSWNAMLSSYSQSENH 385
               +K+G +                        +F  M      SWNA++++  Q+E +
Sbjct: 376 HCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECY 435

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++ I    EM   G++PD  T   +L +CA +  LE G  VH  ++K+   +D +V+S +
Sbjct: 436 EDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTV 495

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y KC     A+++  RI   ++V WNS+I+G SL     EA  FF +M    + P  
Sbjct: 496 VDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDH 555

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           F++ATVL +CA L++   G+Q+H QI K   + D ++ S L++MY KCG++  +   F+ 
Sbjct: 556 FTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEK 615

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
               + V+WN MI GYA +G G EA+ +++ M  + V P+  TFVA+L ACSH GL+D G
Sbjct: 616 ARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDG 675

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            + F+ M   + + P L+H+ CM+D LGR+    EA   I  MP + D V+W+ LLS C+
Sbjct: 676 CQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICK 735

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
           +  +V +A+ AA  + RLDP +++ Y LL+N+Y+  G+W D+   R LM +  + K+P  
Sbjct: 736 IRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGC 795

Query: 746 S 746
           S
Sbjct: 796 S 796



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 33/245 (13%)

Query: 406 TLAIILSSCAAMG--ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
           T + +   CA+ G   L +G+  HA  L +      +V++ L+ +Y++C     A  VF 
Sbjct: 19  TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78

Query: 464 RIPELDIVCWNSMI-AGLSLNSLDIEAFMF-----------------------FK----- 494
            +P  D V WN+M+ A +     D  A +F                       F+     
Sbjct: 79  TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138

Query: 495 --QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
             +M +  +   + + A +L SC  L     G Q+HA   K G   D+  GSAL++MY K
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGK 198

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           C  +  A +FF  M  +N+V+W   I G  QN      + L+  M   G+      + + 
Sbjct: 199 CRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASA 258

Query: 613 LTACS 617
             +C+
Sbjct: 259 FRSCA 263



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 33/210 (15%)

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           FS    L + A  S+   G+  HA++   G++   FV + L++MY +CG    A   FD 
Sbjct: 20  FSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDT 79

Query: 566 MHGKNTVTWNEM-------------------------------IHGYAQNGYGDEAVRLY 594
           M  ++TV+WN M                               I GY Q+G    +V L 
Sbjct: 80  MPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLS 139

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
            +M   GV  D  T   +L +C     + +GV+I +++ +  G+E  +   + ++D  G+
Sbjct: 140 MEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQI-HALAVKTGLETDVRAGSALVDMYGK 198

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
                +A      M  + + V W   ++ C
Sbjct: 199 CRSLDDALRFFHGMG-ERNSVSWGAAIAGC 227


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/772 (31%), Positives = 406/772 (52%), Gaps = 82/772 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA I+ +G      +CN LI+LYSK  +   A+ +F+++  KD                
Sbjct: 134 IHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKD---------------- 177

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                           VSW  +IS L +NG E++A+ ++ +M     +PT    +SV  A
Sbjct: 178 ---------------SVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSA 222

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            T +   + G + HG ++K GL    +V NAL++LY++ G    A  +F +M   + +++
Sbjct: 223 CTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISY 282

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            +++SGLA+      AL++F  M    +  D V+++S+L  CA  G G +          
Sbjct: 283 NSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYK---------- 332

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+Q+H   IK+G  +DL +  SLLD+Y K  D+++A   F      +VV WNVM
Sbjct: 333 ------GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVM 386

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------------- 349
           +  YGQ    +++  +  +M+  G  P++ T  ++L  C                     
Sbjct: 387 LVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGF 446

Query: 350 ---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + G++ T R +   +    V SW AM++ Y+Q +   EA+KLF+E
Sbjct: 447 QFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQE 506

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+ +G++ D    +  +S+CA +  L  G+Q+HA S  +    D  + + L+ +Y++C R
Sbjct: 507 MENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGR 566

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A   F +I   D + WN++I+G + +    EA   F QM Q  +    F+F + +S+
Sbjct: 567 AQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSA 626

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
            A  ++  QG+Q+HA + K GY ++    + LI +Y KCG I  A++ F  M  KN V+W
Sbjct: 627 TANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSW 686

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI GY+Q+GYG EAV L+++M   G+ P+ +TFV +L+ACSH GLV+ G+  F SM  
Sbjct: 687 NAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSK 746

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           +HG+ P  +HY C++D LGRA     A   I+EMP + D +IW  LLS+C +H N+ + +
Sbjct: 747 EHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGE 806

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA  L  L+P++SA Y LL+N+Y+  G+WD     R++M +  + K+P  S
Sbjct: 807 FAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRS 858



 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 203/733 (27%), Positives = 354/733 (48%), Gaps = 85/733 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            K LHA I ++G   +  L +RLI++Y       +A  LFD +P  ++  WN +      
Sbjct: 29  AKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKV------ 82

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    IS L+   L  + L +++ M  E   P   T ASV
Sbjct: 83  -------------------------ISGLLAKKLASQVLGLFSLMITENVTPDESTFASV 117

Query: 127 FKA-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
            +A S      +   + H  +I  G   +  V N L+ LY+K G    A  VFE +   +
Sbjct: 118 LRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKD 177

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM+SGL++  R  EA+ +F  M + AV       SSVL  C +       ++F  
Sbjct: 178 SVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTK------IELFKL 231

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+Q+H   +K G  ++  + N+L+ +Y++ G++ +AE IFS +  R  +S
Sbjct: 232 ----------GEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRIS 281

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG------------- 352
           +N +I+G  Q+  S +A++L ++M+    +PD VT  ++L AC   G             
Sbjct: 282 YNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVI 341

Query: 353 ----------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                 DI+T  E F +  + +V  WN ML +Y Q  N  E+  
Sbjct: 342 KMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYW 401

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +F +MQ  G+ P++ T   IL +C ++G L+ G+Q+H   +K+    + YV S LI +Y+
Sbjct: 402 IFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYA 461

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           K    + A  +  R+ E D+V W +MIAG + + L  EA   F++M    +      F++
Sbjct: 462 KHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSS 521

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
            +S+CA + +  QG+Q+HAQ    GY  D+ +G+AL+ +Y +CG    A   F+ +  K+
Sbjct: 522 AISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKD 581

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            ++WN +I G+AQ+G+ +EA++++  M  +GV+ +  TF + ++A +++  +  G +I +
Sbjct: 582 NISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQI-H 640

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           +M +  G +   +    +I    + G   +A+    EMP K + V W  +++    H   
Sbjct: 641 AMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEK-NVVSWNAMITGYSQHGYG 699

Query: 691 RLAKRAAEELFRL 703
             A    EE+ +L
Sbjct: 700 SEAVSLFEEMKQL 712



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 163/608 (26%), Positives = 283/608 (46%), Gaps = 69/608 (11%)

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           V T++ L      S +LLD    ++ H  + K G D    + + L+ +Y   G   +A+ 
Sbjct: 10  VQTYLWLFEGCFNSGSLLD---AKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIK 66

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F+++   N   +  ++SGL       + L +F LMI + V+ D  + +SVL  C     
Sbjct: 67  LFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRAC----- 121

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                    S  K    V  +Q+H   I  GF +   + N L+D+Y+KNG +D A+++F 
Sbjct: 122 ---------SGGKAPFQV-TEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFE 171

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------- 349
            L  +  VSW  MI+G  Q  +  +AI L  +M      P      ++L AC        
Sbjct: 172 RLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKL 231

Query: 350 ----------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                                       R G++    ++F  M      S+N+++S  +Q
Sbjct: 232 GEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQ 291

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
                 A++LF +MQ   +KPD  T+A +LS+CA++G    GKQ+H+  +K     D  +
Sbjct: 292 RGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLII 351

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS-LNSLDIEAFMFFKQMRQNE 500
              L+ +Y KC   E A   F      ++V WN M+     L +L  E++  F QM+   
Sbjct: 352 EGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLS-ESYWIFLQMQIEG 410

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           + P Q+++ ++L +C  L +   G Q+H Q+ K G+  +++V S LI+MY K G++  AR
Sbjct: 411 LMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTAR 470

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
                +  ++ V+W  MI GY Q+    EA++L+++M   G++ D+I F + ++AC+   
Sbjct: 471 GILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACA--- 527

Query: 621 LVDVGVEIFNSMQLDH------GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
               G++  N  Q  H      G    L     ++    R G   +A +  +++  KD+ 
Sbjct: 528 ----GIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDN- 582

Query: 675 VIWEVLLS 682
           + W  L+S
Sbjct: 583 ISWNALIS 590



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 198/424 (46%), Gaps = 57/424 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  ++++G   + ++C+ LI++Y+K     +A+ +  ++  +D+ SW A+++   +
Sbjct: 434 GEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQ 493

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D    A KLF E                               M N+G    +I  +S 
Sbjct: 494 HDLFAEALKLFQE-------------------------------MENQGIRSDNIGFSSA 522

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   +  +  G++ H      G  +++ + NAL+SLYA+CG  + A   FE++   + 
Sbjct: 523 ISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDN 582

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ A++SG A++    EAL++F  M +  V  +  +  S +   A              
Sbjct: 583 ISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATAN------------- 629

Query: 247 DNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
               + N+  G+Q+H + IK G++++   SN L+ +Y+K G ++ A+  F  +PE++VVS
Sbjct: 630 ----TANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVS 685

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI GY Q    ++A+ L + MK  G  P+ VT + +L AC   G +  G   F SM 
Sbjct: 686 WNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMS 745

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P    +  ++    ++     A +   EM    ++PD      +LS+C     +
Sbjct: 746 KEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMP---IEPDAMIWRTLLSACTVHKNI 802

Query: 421 ESGK 424
           E G+
Sbjct: 803 EIGE 806



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 140/281 (49%), Gaps = 6/281 (2%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+ RG++ +  T   +   C   G L   K++HA   K+    ++ + S LI IY     
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A ++F  IP  ++  WN +I+GL    L  +    F  M    + P + +FA+VL +
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 515 CAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           C+   + FQ   Q+HA+I   G+ +   V + LI++Y K G +  A+  F+ +  K++V+
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W  MI G +QNG  DEA+ L+  M  S V P    F ++L+AC+   L  +G E  +   
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG-EQLHGFI 239

Query: 634 LDHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKD 672
           +  G+    + + C  ++    R G+   AE +  +M  +D
Sbjct: 240 VKWGLSS--ETFVCNALVTLYSRWGNLIAAEQIFSKMHRRD 278


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 256/821 (31%), Positives = 426/821 (51%), Gaps = 95/821 (11%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V+GK  H    + GL    F    L+ +Y++C     A+ +F  +   D   W +++S
Sbjct: 46  ALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMIS 105

Query: 63  AQCKSDDLEFAYKLFDEM------PER------------------------------NVV 86
              ++   + A  LF  M      P+R                              + V
Sbjct: 106 GYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTV 165

Query: 87  SWNNLISALVR-NGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGL 145
           +WN +IS   + +G+E +   +Y  M   G  PT  T AS+  A+        GR+ H  
Sbjct: 166 AWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAA 225

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
            ++ GLD N++V ++L++LYAKCG    A+ VF+   E N V + AM++GL + +  VEA
Sbjct: 226 AVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEA 285

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           ++MF  M R  +  D  +  SVLG CA                    +  G+QV C+TIK
Sbjct: 286 IQMFLYMKRLGLEADEFTYVSVLGACAH----------------LDSHCLGRQVQCVTIK 329

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
              +A L ++N+ LDM++K G +D A+ +F+ +  +  VSWN ++ G     +  +AI +
Sbjct: 330 NCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHM 389

Query: 326 LQRMKSCGFEPDEVTSINMLVACV-----------------------------------R 350
           L+ M   G  PDEV+   ++ AC                                    +
Sbjct: 390 LKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSK 449

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
            GD+++ R++   + + S+   N +++   Q+    EAI LF+++   G+KP   T + I
Sbjct: 450 HGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSI 509

Query: 411 LSSCAAMGILES--GKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           LS C   G+L S  GKQVH  +LK+   + D  V   L+G Y K +  E A ++   +P+
Sbjct: 510 LSGCT--GLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPD 567

Query: 468 -LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
             ++V W ++++G + N    ++ + F +MR  +++P + +FA++L +C+++++   G++
Sbjct: 568 HKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKE 627

Query: 527 VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT-WNEMIHGYAQNG 585
           +H  I K G+ +     SA+I+MY KCGDI  + + F  +  K  +T WN MI G+A+NG
Sbjct: 628 IHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNG 687

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
           Y DEA+ L++ M  S +K D++TF+ +L AC+H+GL+  G   F+SM   +G+ P +DHY
Sbjct: 688 YADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHY 747

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
            C ID LGR GH  EA+ +I+E+P + D VIW   L++CR+H +    + AA+EL  L+P
Sbjct: 748 ACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEP 807

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +NS+ Y LL+N+Y++ G W + +  RE M E    K P  S
Sbjct: 808 QNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKFPGCS 848



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 180/658 (27%), Positives = 302/658 (45%), Gaps = 94/658 (14%)

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G  P    LA+   A + L  +  G++ H    K GL    + A AL+++YA+CG    A
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA-- 232
             VF  +S P+ V + +M+SG  +  R  EA+ +F  M +   S D V+  +V  VCA  
Sbjct: 86  RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAV--VCALT 143

Query: 233 -------------------------------REGCGVESDVFA-----------QSDNKF 250
                                           +  G+E +VF             + + F
Sbjct: 144 ALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTF 203

Query: 251 SRN----------VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           +            + G+QVH   ++ G +A++ + +SL+++YAK G +  A ++F    E
Sbjct: 204 ASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGE 263

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------- 349
           ++VV WN M+ G  +     +AI++   MK  G E DE T +++L AC            
Sbjct: 264 KNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQV 323

Query: 350 ------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G I   + +F+ +      SWNA+L   + +E  
Sbjct: 324 QCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEED 383

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +EAI + + M   GV PD  + A ++++C+ +   E+GKQ+H  ++K +   ++ V S L
Sbjct: 384 EEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSL 443

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I  YSK    E   +V  ++    IV  N +IAGL  N+ + EA   F+Q+ ++ + P+ 
Sbjct: 444 IDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSS 503

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFF- 563
           F+F+++LS C  L SS  G+QVH    K G++N D  VG +L+  Y K      A +   
Sbjct: 504 FTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLI 563

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           +M   KN V W  ++ GYAQNGY  +++  +  M +  V PD++TF +IL ACS    + 
Sbjct: 564 EMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALS 623

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            G EI + + +  G        + +ID   + G    +     E+  K D  +W  ++
Sbjct: 624 DGKEI-HGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMI 680



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 181/409 (44%), Gaps = 78/409 (19%)

Query: 314 GQKYQSTKAIELLQRMKSC----GFEPDEVTSINMLVACVRSGDIKTG------------ 357
           G    +T  ++   R + C    G  PD+      L AC R G + +G            
Sbjct: 3   GATTSATAVLDAFVRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGL 62

Query: 358 -----------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                  R +F  +  P    W +M+S Y ++   +EA+ LF  
Sbjct: 63  GSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTR 122

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+  G  PDR T   ++ +  A+G LE                                 
Sbjct: 123 MEKMGSSPDRVTCVAVVCALTALGRLED-------------------------------- 150

Query: 455 NELAERVFHRIPEL-DIVCWNSMIAGLSLNS-LDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              A  + HR+P     V WN++I+G +  S ++ E F  +K MR   ++PT+ +FA++L
Sbjct: 151 ---ARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASML 207

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           S+ A  ++  +GRQVHA   + G   ++FVGS+LI +Y KCG I  A   FD    KN V
Sbjct: 208 SAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVV 267

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
            WN M++G  +N Y  EA++++  M   G++ D+ T+V++L AC+H     +G ++   +
Sbjct: 268 MWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQV-QCV 326

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            + + ++  L      +D   + G   +A+ L + +  K D V W  LL
Sbjct: 327 TIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYK-DTVSWNALL 374


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/780 (31%), Positives = 403/780 (51%), Gaps = 86/780 (11%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           VAG+ +H HI+++    D +  N LI +Y +C +   A+ ++ K+ +             
Sbjct: 40  VAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYM------------ 87

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                            ER V SWN ++   ++ G  EKAL +  +M   G  P   T+ 
Sbjct: 88  -----------------ERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIM 130

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S   +  +   +E GR  H   ++ GL  ++ VAN +L++YAKCG  + A  VF++M + 
Sbjct: 131 SFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKK 190

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++T  + G A   R   A E+F+ M ++ V  + ++  SVL                
Sbjct: 191 SVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVL---------------- 234

Query: 245 QSDNKFSRNVH---GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
              N FS       G+ VH   +  G E+D  +  +L+ MYAK G       +F  L  R
Sbjct: 235 ---NAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNR 291

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------ 349
            +++WN MI G  +     +A E+  +M+  G  P+++T + +L ACV            
Sbjct: 292 DLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIH 351

Query: 350 -----------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  R G IK  R +FD M    V SW AM+   ++S    
Sbjct: 352 SRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGA 411

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA+ +++EMQ  GV+P+R T   IL++C++   LE G+++H   ++     D +V + L+
Sbjct: 412 EALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLV 471

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +YS C   + A +VF R+ + DIV +N+MI G + ++L  EA   F ++++  + P + 
Sbjct: 472 NMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKV 531

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++  +L++CA   S    R++H  + K G+ +D  VG+AL+  Y KCG    A   F+ M
Sbjct: 532 TYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKM 591

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             +N ++WN +I G AQ+G G +A++L++ M   GVKPD +TFV++L+ACSH+GL++ G 
Sbjct: 592 TKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGR 651

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
             F SM  D  + P ++HY CM+D LGRAG   EAE LI  MP + +  IW  LL +CR+
Sbjct: 652 RYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRI 711

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           H NV +A+RAAE   +LD  N+  Y  L+++Y++ G WD    +R+LM +  + K+P  S
Sbjct: 712 HGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRS 771



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 161/625 (25%), Positives = 310/625 (49%), Gaps = 55/625 (8%)

Query: 101 EEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANA 160
           ++ A+ V   +  +G          + K    + D+  GR+ H  +I+     + Y  NA
Sbjct: 4   KDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA 63

Query: 161 LLSLYAKCGWTKHAVPVFEEMS--EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           L+++Y +CG  + A  V++++S  E    ++ AM+ G  +   + +AL++ R M +  ++
Sbjct: 64  LINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLA 123

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            D  ++ S L  C   G  +E                G+++H   ++ G   D+ ++N +
Sbjct: 124 PDRTTIMSFLSSCKSPG-ALE---------------WGREIHFQAMQAGLLFDVKVANCI 167

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           L+MYAK G ++ A  +F  + ++SVVSW + I GY    +S  A E+ Q+M+  G  P+ 
Sbjct: 168 LNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNR 227

Query: 339 VTSINMLVA-----------------------------------CVRSGDIKTGREMFDS 363
           +T I++L A                                     + G  K  R++F+ 
Sbjct: 228 ITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEK 287

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           + +  + +WN M+   ++    +EA +++ +MQ  GV P++ T  I+L++C     L  G
Sbjct: 288 LVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWG 347

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           K++H+   K     D  V + LI +YS+C   + A  VF ++   D++ W +MI GL+ +
Sbjct: 348 KEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKS 407

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               EA   +++M+Q  + P + ++ ++L++C+  ++   GR++H Q+ + G   D  VG
Sbjct: 408 GFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVG 467

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           + L+ MY  CG +  ARQ FD M  ++ V +N MI GYA +  G EA++L+  +   G+K
Sbjct: 468 NTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLK 527

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           PD +T++ +L AC++SG ++   EI +++    G          ++    + G F +A +
Sbjct: 528 PDKVTYINMLNACANSGSLEWAREI-HTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASI 586

Query: 664 LIDEMPCKDDPVIWEVLLSSCRLHA 688
           + ++M  K + + W  ++     H 
Sbjct: 587 VFEKMT-KRNVISWNAIIGGSAQHG 610



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 180/392 (45%), Gaps = 42/392 (10%)

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+ + + +Q +G + + +    +L  C  +  L +G+QVH   ++  +  D Y  + LI 
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 448 IYSKCQRNELAERVFHRIP--ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           +Y +C   E A +V+ ++   E  +  WN+M+ G        +A    +QM+Q+ + P +
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +  + LSSC    +   GR++H Q  + G + D+ V + ++ MY KCG I  AR+ FD 
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS-------- 617
           M  K+ V+W   I GYA  G  + A  +++ M   GV P+ IT++++L A S        
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246

Query: 618 ---HSGLVDVGVEIFNSMQ-------------------LDHGVEPILDHYTCMIDCLGRA 655
              HS +++ G E   ++                     +  V   L  +  MI  L   
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306

Query: 656 GHFHEAEMLIDEMPCKD---DPVIWEVLLSSC----RLHANVRLAKRAAEELFRLDPKNS 708
           G++ EA  + ++M  +    + + + +LL++C     LH    +  R A+  F  D    
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDI--- 363

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
              + L ++YS  G   D R V + M    ++
Sbjct: 364 GVQNALISMYSRCGSIKDARLVFDKMVRKDVI 395


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 262/777 (33%), Positives = 399/777 (51%), Gaps = 90/777 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HAH+L++GLF      N L+  YSKC    SA+                       
Sbjct: 23  GAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSAR----------------------- 57

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++FDE+P+   VSW++L++A   N +   AL  +  M +         L  V
Sbjct: 58  --------RVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVV 109

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EPN 185
            K +    D   G + H L +  GL  +I+VANAL+++Y   G+   A  VF+E   E N
Sbjct: 110 LKCAP---DAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERN 166

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++  +MS   K DR   A+++F  M+   V  +    S V+  C              
Sbjct: 167 TVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTG------------ 214

Query: 246 SDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                SR++  G++VH + I+ G++ D+  +N+L+DMY+K GD+  A V+F  +PE  VV
Sbjct: 215 -----SRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVV 269

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           SWN  I+G         A+ELL +MKS G  P+  T  ++L AC  SG    GR++    
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFM 329

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          FD +P   +  WNA++S  S    H EA+
Sbjct: 330 VKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEAL 389

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF  M+  G   +RTTLA +L S A++  +   +QVHA + K     D++V +GLI  Y
Sbjct: 390 SLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSY 449

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            KC     A RVF +    DI+ + SMI  LS      +A   F +M +  + P  F  +
Sbjct: 450 WKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLS 509

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           ++L++CA LS+  QG+QVHA + K  +++D+F G+AL+  Y KCG I  A   F  +  K
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEK 569

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
             V+W+ MI G AQ+G+G  A+ ++  M+   + P+ IT  ++L AC+H+GLVD     F
Sbjct: 570 GVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYF 629

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           NSM+   G+E   +HY CMID LGRAG   +A  L++ MP + +  +W  LL++ R+H +
Sbjct: 630 NSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRD 689

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             L + AAE+LF L+P+ S  + LLAN Y+S G WDD+  VR+LM ++ + K+PA S
Sbjct: 690 PELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMS 746



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 165/624 (26%), Positives = 293/624 (46%), Gaps = 65/624 (10%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L + + A+ +LL    G   H  ++K GL       N LLS Y+KC     A  VF+E+ 
Sbjct: 10  LLTRYAATQSLL---QGAHIHAHLLKSGL--FAVFRNHLLSFYSKCRLPGSARRVFDEIP 64

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           +P  V+++++++  +      +AL  FR M   +V  +   L  VL  CA          
Sbjct: 65  DPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CA---------- 113

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
               D  F     G Q+H L +  G   D+ ++N+L+ MY   G +D A ++F     ER
Sbjct: 114 ---PDAGF-----GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCER 165

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
           + VSWN +++ Y +  + + A+++   M   G +P+E     ++ AC  S D++ GR++ 
Sbjct: 166 NTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVH 225

Query: 361 ----------------------------------FDSMPSPSVSSWNAMLSSYSQSENHK 386
                                             F  +P   V SWNA +S      + +
Sbjct: 226 AMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQ 285

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
            A++L  +M+  G+ P+  TL+ IL +CA  G    G+Q+H   +K  +  DNY+A GL+
Sbjct: 286 HALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLV 345

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y+K    + A++VF  IP+ D+V WN++I+G S  +   EA   F +MR+      + 
Sbjct: 346 DMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRT 405

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           + A VL S A L +    RQVHA  EK G+++D  V + LI+ Y KC  +  A + F+  
Sbjct: 406 TLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKH 465

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
              + + +  MI   +Q  +G++A++L+ +M+  G+ PD     ++L AC+     + G 
Sbjct: 466 GSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGK 525

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           ++   +     +  +      ++    + G   +A++    +P K   V W  ++     
Sbjct: 526 QVHAHLIKRQFMSDVFAG-NALVYTYAKCGSIEDADLAFSGLPEK-GVVSWSAMIGGLAQ 583

Query: 687 HANVRLAKRAAEELFRLDPKNSAP 710
           H +    KRA +   R+  ++ +P
Sbjct: 584 HGH---GKRALDVFHRMVDEHISP 604



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 196/455 (43%), Gaps = 82/455 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +HA ++R G   D F  N L+++YSK  +   A  +F K+P  D+ SWNA      
Sbjct: 220 AGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNA------ 273

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                     IS  V +G ++ AL +  +M + G VP   TL+S
Sbjct: 274 -------------------------FISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSS 308

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           + KA         GR+ HG ++K   D + Y+A  L+ +YAK G    A  VF+ + + +
Sbjct: 309 ILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRD 368

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V + A++SG +   +  EAL +F  M ++   ++  +L++VL   A         + A 
Sbjct: 369 LVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTA--------SLEAI 420

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           SD +        QVH L  KLGF +D H+ N L+D Y K   ++ A  +F       +++
Sbjct: 421 SDTR--------QVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIA 472

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           +  MI    Q      AI+L   M   G +PD     ++L AC                 
Sbjct: 473 FTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G I+     F  +P   V SW+AM+   +Q  + K A+ 
Sbjct: 533 KRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALD 592

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           +F  M    + P+  T+  +L +C   G+++  K+
Sbjct: 593 VFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKR 627


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 262/818 (32%), Positives = 416/818 (50%), Gaps = 100/818 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  + + G    +F    LI++Y+KC N   A+ +FD   + D  SW  +++   +
Sbjct: 161 GKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVR 220

Query: 67  SD-----------------------------------DLEFAYKLFDEMPERNVVSWNNL 91
                                                 L  A KLF ++P  NVV+WN +
Sbjct: 221 DGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVM 280

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           IS   + G  E+A+S + ++   G   T  +L SV  A  +L  + +G   H   IK GL
Sbjct: 281 ISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGL 340

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D N+YV +AL+++YAKC     A  VF  + E N V + AM+ G A+     E +E F  
Sbjct: 341 DDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSY 400

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH----GQQVHCLTIKLG 267
           M R     D  + +S+   CA                    ++H    G Q+H + IK  
Sbjct: 401 MKRHGPQPDEFTFTSIFSACA--------------------SLHYLDFGGQLHTVMIKNK 440

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F ++L ++N+L+DMYAK+G +  A   F  +     VSWN +I GY Q+  + +A  + +
Sbjct: 441 FTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFR 500

Query: 328 RMKSCGFEPDEVTSINMLVAC-----------------------------------VRSG 352
           RM S G  PDEV+  +++ AC                                   V+ G
Sbjct: 501 RMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCG 560

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            +   R++F SMP  +V S NA+++ Y+ S + +EAI LF+E+Q  G+KP   T A +L 
Sbjct: 561 VVLAARDVFYSMPYRNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLD 619

Query: 413 SCAAMGILESGKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERVFHRI--PELD 469
            C    +L  G+Q+H   +K         V   L+ +Y   QR   +E +F  +  P+  
Sbjct: 620 GCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPK-G 678

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W ++I+G +  +   +A  F++ MR + + P Q +FA+VL +CA +SS   G++VH+
Sbjct: 679 LVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHS 738

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGD 588
            I   G+  D    S+LI+MY KCGD+ G+ Q F  M  +N+V +WN MI G A+NGY +
Sbjct: 739 LIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAE 798

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
           EA+ ++K M    + PD++TF+ +L+ACSH+G V  G ++F+ M  ++ ++P +DH  CM
Sbjct: 799 EALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCM 858

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           +D LGR G  +EAE  I+++ CK DP++W  LL +CR H +    KRAA +L  L P++S
Sbjct: 859 VDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMELKPQSS 918

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + Y LL+ +Y+    W    ++R  M    + K P YS
Sbjct: 919 SSYVLLSGLYAESENWSGADSLRREMKLKGVKKLPGYS 956



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 212/829 (25%), Positives = 371/829 (44%), Gaps = 131/829 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A    K++H+  L+ G+     L N +++LY KC N   AQ  F ++  KD+++WN++L
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           S       +   + LF  + +  V  WN+                        G  P   
Sbjct: 115 S-------MYLDHGLFATVVQSFVCMWNH------------------------GVRPNEF 143

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T A V  A + L D+ +G++ H  V K+G     +    L+ +YAKC   + A  VF+  
Sbjct: 144 TFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGA 203

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC---------- 231
              + V++T +++G  +    +EA+++F  M R     D ++L +V+             
Sbjct: 204 LNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADAR 263

Query: 232 ---------------------AREGCGVESDVF----AQSDNKFSRNVHG---------- 256
                                A+ G   E+  F     ++  K +R+  G          
Sbjct: 264 KLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS 323

Query: 257 -----QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
                  VH   IK G + ++++ ++L++MYAK   MD+A+ +F++L ER++V WN M+ 
Sbjct: 324 MLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------------- 348
           G+ Q   + + +E    MK  G +PDE T  ++  AC                       
Sbjct: 384 GFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTS 443

Query: 349 ------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                        +SG +K  R+ F+ M      SWNA++  Y Q E + EA  +FR M 
Sbjct: 444 NLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
             GV PD  +LA I+S+CA +   + G+Q H   +K          S LI +Y KC    
Sbjct: 504 SNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVL 563

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A  VF+ +P  ++V  N++IAG +++ L+ EA   F++++   + PT+ +FA +L  C 
Sbjct: 564 AARDVFYSMPYRNVVSINALIAGYTMSHLE-EAIHLFQEIQMVGLKPTEVTFAGLLDGCD 622

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDI-FVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTW 574
                  GRQ+H Q+ K G+++    V  +L+ MY        +   F ++ + K  V W
Sbjct: 623 GAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVW 682

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
             +I GYAQ  + ++A++ Y+ M +  + PD  TF ++L AC+    +  G E+ +S+  
Sbjct: 683 TALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEV-HSLIF 741

Query: 635 DHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
             G    +D  TC  +ID   + G    +  +  EMP ++  + W  ++      A    
Sbjct: 742 HTGFN--MDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGL---AKNGY 796

Query: 693 AKRAAEELFRLDPKNSAP----YSLLANIYSSLGRWDDLRAVRELMSEN 737
           A+ A E   +++ ++  P    +  + +  S  GR  + R V +LM  N
Sbjct: 797 AEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNN 845



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 161/551 (29%), Positives = 285/551 (51%), Gaps = 29/551 (5%)

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K    L  +   +  H   +KIG+     + N ++ LY KCG    A   F  + + +  
Sbjct: 49  KPKAVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVF 108

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            + +++S           ++ F  M    V  +  + + VL  C+            Q  
Sbjct: 109 AWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSG----------LQDI 158

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
           N      +G+QVHC   K+GF         L+DMYAK  ++  A ++F        VSW 
Sbjct: 159 N------YGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWT 212

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSP 367
            +IAGY +     +A+++  +M+  G  PD++  + ++ A V  G +   R++F  +P+P
Sbjct: 213 TLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNP 272

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +V +WN M+S +++    +EAI  F E++  G+K  R++L  +LS+ A++ +L  G  VH
Sbjct: 273 NVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVH 332

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
           A ++K     + YV S L+ +Y+KC + + A++VF+ + E +IV WN+M+ G + N L  
Sbjct: 333 AQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQ 392

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           E   FF  M+++   P +F+F ++ S+CA L     G Q+H  + K+ + +++FV +AL+
Sbjct: 393 EVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALV 452

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
           +MY K G +  AR+ F+ M   + V+WN +I GY Q  Y DEA  +++ M+++GV PD++
Sbjct: 453 DMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEV 512

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHG--VEPILDHYTC----MIDCLGRAGHFHEA 661
           +  +I++AC++       V+ F   Q  H   V+  LD  TC    +ID   + G    A
Sbjct: 513 SLASIVSACAN-------VKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAA 565

Query: 662 EMLIDEMPCKD 672
             +   MP ++
Sbjct: 566 RDVFYSMPYRN 576


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/783 (31%), Positives = 409/783 (52%), Gaps = 92/783 (11%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           VAG+ +H HI+++    D +  N LI +Y +C +   A+ +++K+ H             
Sbjct: 158 VAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNH------------- 204

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV---PTHI 121
                            ER V SWN ++   V+ G  E+AL +  +M   G      T +
Sbjct: 205 ----------------TERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTM 248

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            L S  K+ +AL   E GR  H   +K  L  ++ VAN +L++YAKCG    A  VF++M
Sbjct: 249 RLLSSCKSPSAL---ECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKM 305

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + V++T ++ G A       A E+F+ M ++ V  + ++  +VL             
Sbjct: 306 ETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVL------------- 352

Query: 242 VFAQSDNKFSRNVH---GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                 N FS       G+ VH   +  G E+DL +  +L+ MYAK G       +F  L
Sbjct: 353 ------NAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL 406

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------- 349
             R +++WN MI G  +     +A E+  +M+  G  P+++T + +L ACV         
Sbjct: 407 VNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGR 466

Query: 350 --------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                     R G IK  R +F+ M    + SW AM+   ++S 
Sbjct: 467 EIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSG 526

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
              EA+ +F++MQ  G+KP+R T   IL++C++   L+ G+++H   ++     D +VA+
Sbjct: 527 LGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVAN 586

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            L+ +YS C   + A +VF R+ + DIV +N+MI G + ++L  EA   F ++++  + P
Sbjct: 587 TLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP 646

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            + ++  +L++CA   S    +++H+ + KDGY++D  +G+AL+  Y KCG    A   F
Sbjct: 647 DKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVF 706

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D M  +N ++WN +I G AQ+G G + ++L++ M   G+KPD +TFV++L+ACSH+GL++
Sbjct: 707 DKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLE 766

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G   F SM  D G+ P ++HY CM+D LGRAG   E E LI  MP + +  IW  LL +
Sbjct: 767 EGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGA 826

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           CR+H NV +A+RAAE   +LDP N+A Y  L+++Y++ G WD    +R+LM +  + K+P
Sbjct: 827 CRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEP 886

Query: 744 AYS 746
             S
Sbjct: 887 GRS 889



 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 161/625 (25%), Positives = 309/625 (49%), Gaps = 55/625 (8%)

Query: 101 EEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANA 160
           +++A+ V   +  +G          + K    + D+  GR  H  +I+     + Y  NA
Sbjct: 122 KDRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNA 181

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEV--TFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           L+++Y +CG  + A  V+ +++       ++ AM+ G  +   + EAL++ R M +  ++
Sbjct: 182 LINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLA 241

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
           +   +   +L  C +    +E                G+++H   +K     D++++N +
Sbjct: 242 LGRATTMRLLSSC-KSPSALEC---------------GREIHVEAMKARLLFDVNVANCI 285

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           L+MYAK G +  A  +F  +  +SVVSW ++I GY     S  A E+ Q+M+  G  P+ 
Sbjct: 286 LNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNR 345

Query: 339 VTSINMLVA-----------------------------------CVRSGDIKTGREMFDS 363
           +T IN+L A                                     + G  K  R++F+ 
Sbjct: 346 ITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEK 405

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           + +  + +WN M+   ++  N +EA +++ +MQ  G+ P++ T  I+L++C     L  G
Sbjct: 406 LVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWG 465

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           +++H+  +K     D  V + LI +Y++C   + A  +F+++   DI+ W +MI GL+ +
Sbjct: 466 REIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKS 525

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
            L  EA   F+ M+Q  + P + ++ ++L++C+  ++   GR++H Q+ + G   D  V 
Sbjct: 526 GLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVA 585

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           + L+ MY  CG +  ARQ FD M  ++ V +N MI GYA +  G EA++L+  +   G+K
Sbjct: 586 NTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLK 645

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           PD +T++ +L AC++SG ++   EI +S+ L  G          ++    + G F +A +
Sbjct: 646 PDKVTYINMLNACANSGSLEWAKEI-HSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALL 704

Query: 664 LIDEMPCKDDPVIWEVLLSSCRLHA 688
           + D+M  K + + W  ++  C  H 
Sbjct: 705 VFDKM-MKRNVISWNAIIGGCAQHG 728


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/765 (32%), Positives = 406/765 (53%), Gaps = 51/765 (6%)

Query: 17  NGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKL 76
           +G   + F+ N L+++Y++C     A+ +FD MP +D  SWN +L+A   + D+  A  L
Sbjct: 46  SGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 105

Query: 77  FDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDV 136
           FD MP+ +VVSWN L+S   + G+ ++++ ++ +M+  G  P   T A + K+ +AL ++
Sbjct: 106 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 165

Query: 137 EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
             G + H L +K GL+ ++   +AL+ +Y KC     A+  F  M E N V++ A ++G 
Sbjct: 166 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 225

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
            + ++ V  LE+F  M R  + +   S +S    CA   C                N  G
Sbjct: 226 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC---------------LNT-G 269

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +Q+H   IK  F +D  +  +++D+YAK   +  A   F  LP  +V + N M+ G  + 
Sbjct: 270 RQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRA 329

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD-----------IKTGRE------ 359
               +A+ L Q M       D V+   +  AC  +             IK+G +      
Sbjct: 330 GLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVN 389

Query: 360 ------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                             +F  M      SWNA++++  Q+ ++ + I  F EM   G+K
Sbjct: 390 NAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMK 449

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           PD  T   +L +CAA+  LE G  VH   +K+    D +VAS ++ +Y KC   + A+++
Sbjct: 450 PDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKL 509

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
             RI    +V WN++++G SLN    EA  FF +M    + P  F+FATVL +CA L++ 
Sbjct: 510 HDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATI 569

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G+Q+H QI K   ++D ++ S L++MY KCGD+  +   F+ +  ++ V+WN MI GY
Sbjct: 570 ELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGY 629

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           A +G G EA+R+++ M    V P+  TFVA+L ACSH GL D G   F+ M   + +EP 
Sbjct: 630 ALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQ 689

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           L+H+ CM+D LGR+    EA   I+ MP + D VIW+ LLS C++  +V +A+ AA  + 
Sbjct: 690 LEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVL 749

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LDP +S+ Y LL+N+Y+  G+W D+   R L+ +  + K+P  S
Sbjct: 750 LLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCS 794



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 184/418 (44%), Gaps = 55/418 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K +  G+ +H   +++G   D  + N +++LY KC     A  +F  M  KD  SWNAI 
Sbjct: 365 KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAI- 423

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                         I+AL +NG  +  +  +N+M   G  P   
Sbjct: 424 ------------------------------IAALEQNGHYDDTILHFNEMLRFGMKPDDF 453

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  SV KA  AL  +E+G   H  VIK GL  + +VA+ ++ +Y KCG    A  + + +
Sbjct: 454 TYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRI 513

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
                V++ A++SG +      EA + F  M+   +  D  + ++VL  CA         
Sbjct: 514 GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCA--------- 564

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    +    G+Q+H   IK     D ++S++L+DMYAK GDM  + ++F  + +R
Sbjct: 565 -------NLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKR 617

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
             VSWN MI GY       +A+ + +RM+     P+  T + +L AC   G    G   F
Sbjct: 618 DFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYF 677

Query: 362 DSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
             M +     P +  +  M+    +S+  +EA+K    M F+    D      +LS C
Sbjct: 678 HLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQA---DAVIWKTLLSIC 732



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/511 (22%), Positives = 215/511 (42%), Gaps = 88/511 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHAH ++N    D  +   ++++Y+K N+   A+                       
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDAR----------------------- 305

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   + F  +P   V + N ++  LVR GL  +A+ ++  M         ++L+ V
Sbjct: 306 --------RAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGV 357

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F A         G++ H L IK G D +I V NA+L LY KC     A  +F+ M + + 
Sbjct: 358 FSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDS 417

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+++ L +     + +  F  M+R  +  D  +  SVL  CA              
Sbjct: 418 VSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA-------------- 463

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   +G  VH   IK G  +D  ++++++DMY K G +D A+ +   +  + VVSW
Sbjct: 464 --ALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSW 521

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N +++G+    +S +A +    M   G +PD  T   +L  C     I+ G+++      
Sbjct: 522 NAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIK 581

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F+ +      SWNAM+  Y+      EA+++
Sbjct: 582 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRM 641

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---VHAASLKTASHIDNYVASGLIGI 448
           F  MQ   V P+  T   +L +C+ +G+ + G +   +     K    ++++    ++ I
Sbjct: 642 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFAC--MVDI 699

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
             + +  + A +  + +P + D V W ++++
Sbjct: 700 LGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 48/309 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G ++H  ++++GL  D F+ + ++++Y KC     AQ                       
Sbjct: 471 GLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQ----------------------- 507

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   KL D +  + VVSWN ++S    N   E+A   +++M + G  P H T A+V
Sbjct: 508 --------KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATV 559

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 L  +E G++ HG +IK  +  + Y+++ L+ +YAKCG    ++ VFE++ + + 
Sbjct: 560 LDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDF 619

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-----EGCGV--- 238
           V++ AM+ G A     VEAL MF  M ++ V  +  +  +VL  C+      +GC     
Sbjct: 620 VSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHL 679

Query: 239 ---------ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
                    + + FA   +   R+   Q+       + F+AD  +  +LL +     D++
Sbjct: 680 MTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVE 739

Query: 290 SAEVIFSNL 298
            AE+  SN+
Sbjct: 740 IAELAASNV 748



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 33/268 (12%)

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGI-LESGKQVHAASLKTASHIDN-YVASGLIGIYSK 451
           + Q   V P R T + +  SCA  G    +  +   A +  +  + N +V++ L+ +Y++
Sbjct: 5   QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYAR 64

Query: 452 CQRNELAERVFHRIPELDIVCWNSM-------------------------------IAGL 480
           C     A RVF  +P  D V WN+M                               ++G 
Sbjct: 65  CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGY 124

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
               +  E+   F +M +  + P + +FA +L SC+ L     G QVHA   K G   D+
Sbjct: 125 CQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDV 184

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
             GSAL++MY KC  +  A  FF  M  +N V+W   I G  QN      + L+ +M   
Sbjct: 185 RTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRL 244

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEI 628
           G+     ++ +   +C+    ++ G ++
Sbjct: 245 GLGVSQPSYASAFRSCAAMSCLNTGRQL 272



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 45/229 (19%)

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA-------QIEKDGYVNDIFVGSAL 546
           +Q +   + P + +F+ V  SCA+      GR+  A       ++   G+V + FV + L
Sbjct: 4   EQQQPPPVAPARVTFSRVFQSCAQ-----AGREALAAGRAAHARMVVSGFVPNAFVSNCL 58

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEM----------------------------- 577
           ++MY +C     AR+ FD M  ++TV+WN M                             
Sbjct: 59  LQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWN 118

Query: 578 --IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
             + GY Q G   E+V L+ +M   GV PD  TF  +L +CS    + +GV++ +++ + 
Sbjct: 119 ALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQV-HALAVK 177

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
            G+E  +   + ++D  G+     +A      MP + + V W   ++ C
Sbjct: 178 TGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIAGC 225


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g09040, mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 268/814 (32%), Positives = 411/814 (50%), Gaps = 92/814 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +++ GL  +++    L+++Y+KC+    A+ +F+ +   +   W  + S   K
Sbjct: 179 GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVK 238

Query: 67  S--------------------DDLEF---------------AYKLFDEMPERNVVSWNNL 91
           +                    D L F               A  LF EM   +VV+WN +
Sbjct: 239 AGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVM 298

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           IS   + G E  A+  +  M       T  TL SV  A   + +++ G   H   IK+GL
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
             NIYV ++L+S+Y+KC   + A  VFE + E N+V + AM+ G A      + +E+F  
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMD 418

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M     +ID  + +S+L  CA           A  D +      G Q H + IK     +
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCA-----------ASHDLEM-----GSQFHSIIIKKKLAKN 462

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L + N+L+DMYAK G ++ A  IF  + +R  V+WN +I  Y Q    ++A +L +RM  
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522

Query: 332 CGFEPDEVTSINMLVACV-----------------------------------RSGDIKT 356
           CG   D     + L AC                                    + G IK 
Sbjct: 523 CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R++F S+P  SV S NA+++ YSQ+ N +EA+ LF+EM  RGV P   T A I+ +C  
Sbjct: 583 ARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHK 641

Query: 417 MGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAERVFHRI--PELDIVCW 473
              L  G Q H    K   S    Y+   L+G+Y   +    A  +F  +  P+  IV W
Sbjct: 642 PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPK-SIVLW 700

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
             M++G S N    EA  F+K+MR + + P Q +F TVL  C+ LSS  +GR +H+ I  
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAVR 592
             +  D    + LI+MY KCGD+ G+ Q FD M  + N V+WN +I+GYA+NGY ++A++
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820

Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
           ++  M  S + PD+ITF+ +LTACSH+G V  G +IF  M   +G+E  +DH  CM+D L
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYS 712
           GR G+  EA+  I+    K D  +W  LL +CR+H +    + +AE+L  L+P+NS+ Y 
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYV 940

Query: 713 LLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LL+NIY+S G W+   A+R++M +  + K P YS
Sbjct: 941 LLSNIYASQGCWEKANALRKVMRDRGVKKVPGYS 974



 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 219/764 (28%), Positives = 352/764 (46%), Gaps = 123/764 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H+  L  G+  +  L N +++LY+KC     A+  FD +  KD+ +WN++LS    
Sbjct: 79  GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS---- 133

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   + S++ + G   K L  +  +      P   T + V
Sbjct: 134 ------------------------MYSSIGKPG---KVLRSFVSLFENQIFPNKFTFSIV 166

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                   +VE GR+ H  +IK+GL++N Y   AL+ +YAKC     A  VFE + +PN 
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226

Query: 187 VTFTAMMSGLAKTDRVVEALEMF-------------------------------RLMIRK 215
           V +T + SG  K     EA+ +F                               RL+  +
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGE 286

Query: 216 AVSIDSVSLSSVLGVCAREGC-GVESDVF---AQSDNKFSRNVHGQ-------------- 257
             S D V+ + ++    + GC  V  + F    +S  K +R+  G               
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346

Query: 258 -QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
             VH   IKLG  +++++ +SL+ MY+K   M++A  +F  L E++ V WN MI GY   
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------------- 357
            +S K +EL   MKS G+  D+ T  ++L  C  S D++ G                   
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466

Query: 358 ----------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                           R++F+ M      +WN ++ SY Q EN  EA  LF+ M   G+ 
Sbjct: 467 NALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV 526

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            D   LA  L +C  +  L  GKQVH  S+K     D +  S LI +YSKC   + A +V
Sbjct: 527 SDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKV 586

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F  +PE  +V  N++IAG S N+L+ EA + F++M    + P++ +FAT++ +C K  S 
Sbjct: 587 FSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESL 645

Query: 522 FQGRQVHAQIEKDGYVND-IFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEMIH 579
             G Q H QI K G+ ++  ++G +L+ MY     +  A   F ++   K+ V W  M+ 
Sbjct: 646 TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMS 705

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM-QLDHGV 638
           G++QNG+ +EA++ YK+M   GV PD  TFV +L  CS    +  G  I + +  L H +
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL 765

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           + +  +   +ID   + G    +  + DEM  + + V W  L++
Sbjct: 766 DELTSN--TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLIN 807



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 131/267 (49%), Gaps = 17/267 (6%)

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           KLF+  +     P R  LA           L  GK VH+ SL      +  + + ++ +Y
Sbjct: 57  KLFKSRKVFDEMPQRLALA-----------LRIGKAVHSKSLILGIDSEGRLGNAIVDLY 105

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC +   AE+ F  + E D+  WNSM++  S      +    F  + +N+++P +F+F+
Sbjct: 106 AKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFS 164

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
            VLS+CA+ ++   GRQ+H  + K G   + + G AL++MY KC  I  AR+ F+ +   
Sbjct: 165 IVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP 224

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           NTV W  +  GY + G  +EAV +++ M   G +PD + FV ++      G +     +F
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAG 656
             M       P +  +  MI   G+ G
Sbjct: 285 GEMS-----SPDVVAWNVMISGHGKRG 306


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/765 (32%), Positives = 405/765 (52%), Gaps = 51/765 (6%)

Query: 17  NGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKL 76
           +G     F+ N L+++Y++C     A+ +FD MP +D  SWN +L+A   + D+  A  L
Sbjct: 88  SGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 147

Query: 77  FDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDV 136
           FD MP+ +VVSWN L+S   + G+ ++++ ++ +M+  G  P   T A + K+ +AL ++
Sbjct: 148 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 207

Query: 137 EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
             G + H L +K GL+ ++   +AL+ +Y KC     A+  F  M E N V++ A ++G 
Sbjct: 208 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 267

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
            + ++ V  LE+F  M R  + +   S +S    CA   C                N  G
Sbjct: 268 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC---------------LNT-G 311

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +Q+H   IK  F +D  +  +++D+YAK   +  A   F  LP  +V + N M+ G  + 
Sbjct: 312 RQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRA 371

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD-----------IKTGRE------ 359
               +A+ L Q M       D V+   +  AC  +             IK+G +      
Sbjct: 372 GLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVN 431

Query: 360 ------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                             +F  M      SWNA++++  Q+ ++ + I  F EM   G+K
Sbjct: 432 NAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMK 491

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           PD  T   +L +CAA+  LE G  VH   +K+    D +VAS ++ +Y KC   + A+++
Sbjct: 492 PDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKL 551

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
             RI    +V WN++++G SLN    EA  FF +M    + P  F+FATVL +CA L++ 
Sbjct: 552 HDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATI 611

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G+Q+H QI K   ++D ++ S L++MY KCGD+  +   F+ +  ++ V+WN MI GY
Sbjct: 612 ELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGY 671

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           A +G G EA+R+++ M    V P+  TFVA+L ACSH GL D G   F+ M   + +EP 
Sbjct: 672 ALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQ 731

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           L+H+ CM+D LGR+    EA   I+ MP + D VIW+ LLS C++  +V +A+ AA  + 
Sbjct: 732 LEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVL 791

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LDP +S+ Y LL+N+Y+  G+W D+   R L+ +  + K+P  S
Sbjct: 792 LLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCS 836



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 184/418 (44%), Gaps = 55/418 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K +  G+ +H   +++G   D  + N +++LY KC     A  +F  M  KD  SWNAI 
Sbjct: 407 KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAI- 465

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                         I+AL +NG  +  +  +N+M   G  P   
Sbjct: 466 ------------------------------IAALEQNGHYDDTILHFNEMLRFGMKPDDF 495

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  SV KA  AL  +E+G   H  VIK GL  + +VA+ ++ +Y KCG    A  + + +
Sbjct: 496 TYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRI 555

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
                V++ A++SG +      EA + F  M+   +  D  + ++VL  CA         
Sbjct: 556 GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCA--------- 606

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    +    G+Q+H   IK     D ++S++L+DMYAK GDM  + ++F  + +R
Sbjct: 607 -------NLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKR 659

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
             VSWN MI GY       +A+ + +RM+     P+  T + +L AC   G    G   F
Sbjct: 660 DFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYF 719

Query: 362 DSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
             M +     P +  +  M+    +S+  +EA+K    M F+    D      +LS C
Sbjct: 720 HLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQA---DAVIWKTLLSIC 774



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/511 (22%), Positives = 215/511 (42%), Gaps = 88/511 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHAH ++N    D  +   ++++Y+K N+   A+                       
Sbjct: 311 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDAR----------------------- 347

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   + F  +P   V + N ++  LVR GL  +A+ ++  M         ++L+ V
Sbjct: 348 --------RAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGV 399

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F A         G++ H L IK G D +I V NA+L LY KC     A  +F+ M + + 
Sbjct: 400 FSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDS 459

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+++ L +     + +  F  M+R  +  D  +  SVL  CA              
Sbjct: 460 VSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA-------------- 505

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   +G  VH   IK G  +D  ++++++DMY K G +D A+ +   +  + VVSW
Sbjct: 506 --ALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSW 563

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N +++G+    +S +A +    M   G +PD  T   +L  C     I+ G+++      
Sbjct: 564 NAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIK 623

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F+ +      SWNAM+  Y+      EA+++
Sbjct: 624 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRM 683

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---VHAASLKTASHIDNYVASGLIGI 448
           F  MQ   V P+  T   +L +C+ +G+ + G +   +     K    ++++    ++ I
Sbjct: 684 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFAC--MVDI 741

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
             + +  + A +  + +P + D V W ++++
Sbjct: 742 LGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 48/309 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G ++H  ++++GL  D F+ + ++++Y KC     AQ                       
Sbjct: 513 GLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQ----------------------- 549

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   KL D +  + VVSWN ++S    N   E+A   +++M + G  P H T A+V
Sbjct: 550 --------KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATV 601

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 L  +E G++ HG +IK  +  + Y+++ L+ +YAKCG    ++ VFE++ + + 
Sbjct: 602 LDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDF 661

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-----EGCGV--- 238
           V++ AM+ G A     VEAL MF  M ++ V  +  +  +VL  C+      +GC     
Sbjct: 662 VSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHL 721

Query: 239 ---------ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
                    + + FA   +   R+   Q+       + F+AD  +  +LL +     D++
Sbjct: 722 MTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVE 781

Query: 290 SAEVIFSNL 298
            AE+  SN+
Sbjct: 782 IAELAASNV 790



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 112/267 (41%), Gaps = 43/267 (16%)

Query: 400 VKPDRTTLAIILSSCAAMG-------ILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           V P R T + +  SCA  G            + V +  + TA     +V++ L+ +Y++C
Sbjct: 53  VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTA-----FVSNCLLQMYARC 107

Query: 453 QRNELAERVFHRIPELDIVCWNSM-------------------------------IAGLS 481
                A RVF  +P  D V WN+M                               ++G  
Sbjct: 108 AGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYC 167

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
              +  E+   F +M +  + P + +FA +L SC+ L     G QVHA   K G   D+ 
Sbjct: 168 QRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVR 227

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
            GSAL++MY KC  +  A  FF  M  +N V+W   I G  QN      + L+ +M   G
Sbjct: 228 TGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLG 287

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEI 628
           +     ++ +   +C+    ++ G ++
Sbjct: 288 LGVSQPSYASAFRSCAAMSCLNTGRQL 314



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 45/234 (19%)

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA-------QIEKDGYVNDIF 541
           A M  +Q +   + P + +F+ V  SCA+      GR+  A       ++   G+V   F
Sbjct: 41  ARMPAEQQQPPPVAPARVTFSRVFQSCAQ-----AGREALAAGRAAHARMVVSGFVPTAF 95

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM------------------------ 577
           V + L++MY +C     AR+ FD M  ++TV+WN M                        
Sbjct: 96  VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 155

Query: 578 -------IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
                  + GY Q G   E+V L+ +M   GV PD  TF  +L +CS    + +GV++ +
Sbjct: 156 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQV-H 214

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           ++ +  G+E  +   + ++D  G+     +A      MP + + V W   ++ C
Sbjct: 215 ALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIAGC 267


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/765 (32%), Positives = 405/765 (52%), Gaps = 51/765 (6%)

Query: 17  NGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKL 76
           +G     F+ N L+++Y++C     A+ +FD MP +D  SWN +L+A   + D+  A  L
Sbjct: 46  SGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 105

Query: 77  FDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDV 136
           FD MP+ +VVSWN L+S   + G+ ++++ ++ +M+  G  P   T A + K+ +AL ++
Sbjct: 106 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 165

Query: 137 EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
             G + H L +K GL+ ++   +AL+ +Y KC     A+  F  M E N V++ A ++G 
Sbjct: 166 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 225

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
            + ++ V  LE+F  M R  + +   S +S    CA   C                N  G
Sbjct: 226 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC---------------LNT-G 269

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +Q+H   IK  F +D  +  +++D+YAK   +  A   F  LP  +V + N M+ G  + 
Sbjct: 270 RQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRA 329

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD-----------IKTGRE------ 359
               +A+ L Q M       D V+   +  AC  +             IK+G +      
Sbjct: 330 GLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVN 389

Query: 360 ------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                             +F  M      SWNA++++  Q+ ++ + I  F EM   G+K
Sbjct: 390 NAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMK 449

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           PD  T   +L +CAA+  LE G  VH   +K+    D +VAS ++ +Y KC   + A+++
Sbjct: 450 PDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKL 509

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
             RI    +V WN++++G SLN    EA  FF +M    + P  F+FATVL +CA L++ 
Sbjct: 510 HDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATI 569

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G+Q+H QI K   ++D ++ S L++MY KCGD+  +   F+ +  ++ V+WN MI GY
Sbjct: 570 ELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGY 629

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           A +G G EA+R+++ M    V P+  TFVA+L ACSH GL D G   F+ M   + +EP 
Sbjct: 630 ALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQ 689

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           L+H+ CM+D LGR+    EA   I+ MP + D VIW+ LLS C++  +V +A+ AA  + 
Sbjct: 690 LEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVL 749

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LDP +S+ Y LL+N+Y+  G+W D+   R L+ +  + K+P  S
Sbjct: 750 LLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCS 794



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 184/418 (44%), Gaps = 55/418 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K +  G+ +H   +++G   D  + N +++LY KC     A  +F  M  KD  SWNAI 
Sbjct: 365 KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAI- 423

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                         I+AL +NG  +  +  +N+M   G  P   
Sbjct: 424 ------------------------------IAALEQNGHYDDTILHFNEMLRFGMKPDDF 453

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  SV KA  AL  +E+G   H  VIK GL  + +VA+ ++ +Y KCG    A  + + +
Sbjct: 454 TYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRI 513

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
                V++ A++SG +      EA + F  M+   +  D  + ++VL  CA         
Sbjct: 514 GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCA--------- 564

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    +    G+Q+H   IK     D ++S++L+DMYAK GDM  + ++F  + +R
Sbjct: 565 -------NLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKR 617

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
             VSWN MI GY       +A+ + +RM+     P+  T + +L AC   G    G   F
Sbjct: 618 DFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYF 677

Query: 362 DSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
             M +     P +  +  M+    +S+  +EA+K    M F+    D      +LS C
Sbjct: 678 HLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQA---DAVIWKTLLSIC 732



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/511 (22%), Positives = 215/511 (42%), Gaps = 88/511 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHAH ++N    D  +   ++++Y+K N+   A+                       
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDAR----------------------- 305

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   + F  +P   V + N ++  LVR GL  +A+ ++  M         ++L+ V
Sbjct: 306 --------RAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGV 357

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F A         G++ H L IK G D +I V NA+L LY KC     A  +F+ M + + 
Sbjct: 358 FSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDS 417

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+++ L +     + +  F  M+R  +  D  +  SVL  CA              
Sbjct: 418 VSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA-------------- 463

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   +G  VH   IK G  +D  ++++++DMY K G +D A+ +   +  + VVSW
Sbjct: 464 --ALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSW 521

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N +++G+    +S +A +    M   G +PD  T   +L  C     I+ G+++      
Sbjct: 522 NAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIK 581

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F+ +      SWNAM+  Y+      EA+++
Sbjct: 582 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRM 641

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---VHAASLKTASHIDNYVASGLIGI 448
           F  MQ   V P+  T   +L +C+ +G+ + G +   +     K    ++++    ++ I
Sbjct: 642 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFAC--MVDI 699

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
             + +  + A +  + +P + D V W ++++
Sbjct: 700 LGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 143/309 (46%), Gaps = 48/309 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G ++H  ++++GL  D F+ + ++++Y KC     AQ                       
Sbjct: 471 GLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQ----------------------- 507

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   KL D +  + VVSWN ++S    N   E+A   +++M + G  P H T A+V
Sbjct: 508 --------KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATV 559

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 L  +E G++ HG +IK  +  + Y+++ L+ +YAKCG    ++ VFE++ + + 
Sbjct: 560 LDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDF 619

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-----EGC----- 236
           V++ AM+ G A     VEAL MF  M ++ V  +  +  +VL  C+      +GC     
Sbjct: 620 VSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHL 679

Query: 237 -----GVESDV--FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
                 +E  +  FA   +   R+   Q+       + F+AD  +  +LL +     D++
Sbjct: 680 MTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVE 739

Query: 290 SAEVIFSNL 298
            AE+  SN+
Sbjct: 740 IAELAASNV 748



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 114/273 (41%), Gaps = 43/273 (15%)

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMG-------ILESGKQVHAASLKTASHIDNYVASGLI 446
           + Q   V P R T + +  SCA  G            + V +  + TA     +V++ L+
Sbjct: 5   QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTA-----FVSNCLL 59

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSM------------------------------ 476
            +Y++C     A RVF  +P  D V WN+M                              
Sbjct: 60  QMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNA 119

Query: 477 -IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
            ++G     +  E+   F +M +  + P + +FA +L SC+ L     G QVHA   K G
Sbjct: 120 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 179

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
              D+  GSAL++MY KC  +  A  FF  M  +N V+W   I G  QN      + L+ 
Sbjct: 180 LEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFI 239

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           +M   G+     ++ +   +C+    ++ G ++
Sbjct: 240 EMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQL 272



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 45/229 (19%)

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA-------QIEKDGYVNDIFVGSAL 546
           +Q +   + P + +F+ V  SCA+      GR+  A       ++   G+V   FV + L
Sbjct: 4   EQQQPPPVAPARVTFSRVFQSCAQ-----AGREALAAGRAAHARMVVSGFVPTAFVSNCL 58

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEM----------------------------- 577
           ++MY +C     AR+ FD M  ++TV+WN M                             
Sbjct: 59  LQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWN 118

Query: 578 --IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
             + GY Q G   E+V L+ +M   GV PD  TF  +L +CS    + +GV++ +++ + 
Sbjct: 119 ALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQV-HALAVK 177

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
            G+E  +   + ++D  G+     +A      MP + + V W   ++ C
Sbjct: 178 TGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIAGC 225


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/729 (33%), Positives = 385/729 (52%), Gaps = 60/729 (8%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+YS N ++           A ++F+E+  R+ VSW  ++S   +NGL E+AL +Y +M 
Sbjct: 85  DLYSKNGLVLP---------ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMH 135

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             G VPT   L+SV  + T       GR  H    K G    I+V NA+++LY +CG  +
Sbjct: 136 RAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFR 195

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF +M   + VTF  ++SG A+      ALE+F  M    +S D V++SS+L  CA
Sbjct: 196 LAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACA 255

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G     D+             G Q+H    K G  +D  +  SLLD+Y K GD+++A 
Sbjct: 256 SLG-----DL-----------QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---- 348
           VIF++    +VV WN+M+  +GQ     K+ EL  +M++ G  P++ T   +L  C    
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359

Query: 349 -------VRSGDIKTG------------------------REMFDSMPSPSVSSWNAMLS 377
                  + S  +KTG                        R + + +    V SW +M++
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y Q E  K+A+  F+EMQ  G+ PD   LA  +S CA +  +  G Q+HA    +    
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D  + + L+ +Y++C R   A   F  I   D + WN +++G + + L  EA   F +M 
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD 539

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           Q+ +    F+F + LS+ A L+   QG+Q+HA++ K G+  +  VG+ALI +Y KCG   
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A+  F  M  +N V+WN +I   +Q+G G EA+ L+  M   G+KP+D+TF+ +L ACS
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACS 659

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           H GLV+ G+  F SM  ++G+ P  DHY C+ID  GRAG    A+  I+EMP   D ++W
Sbjct: 660 HVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVW 719

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
             LLS+C++H N+ + + AA+ L  L+P +SA Y LL+N Y+   +W +   VR++M + 
Sbjct: 720 RTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDR 779

Query: 738 CIVKDPAYS 746
            + K+P  S
Sbjct: 780 GVRKEPGRS 788



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 193/653 (29%), Positives = 326/653 (49%), Gaps = 70/653 (10%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE--GFVPTHITLASVFKASTALLDVE 137
           M  R   S    ++  + +    K LS++   + +  G  P  +  A   +A        
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRG----- 53

Query: 138 HGRR------CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
           +GRR       H   +  GL K   V N L+ LY+K G    A  VFEE+S  + V++ A
Sbjct: 54  NGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVA 113

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           M+SG A+     EAL ++R M R  V      LSSVL  C +      +++FAQ      
Sbjct: 114 MLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK------AELFAQ------ 161

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G+ +H    K GF +++ + N+++ +Y + G    AE +F ++P R  V++N +I+
Sbjct: 162 ----GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLIS 217

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------------- 348
           G+ Q      A+E+ + M+  G  PD VT  ++L AC                       
Sbjct: 218 GHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISS 277

Query: 349 ------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                       V+ GD++T   +F+S    +V  WN ML ++ Q  +  ++ +LF +MQ
Sbjct: 278 DYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQ 337

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
             G++P++ T   IL +C     ++ G+Q+H+ S+KT    D YV+  LI +YSK    E
Sbjct: 338 AAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLE 397

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A RV   + E D+V W SMIAG   +    +A   FK+M++  ++P     A+ +S CA
Sbjct: 398 KARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
            +++  QG Q+HA+I   GY  D+ + +AL+ +Y +CG I  A   F+ +  K+ +TWN 
Sbjct: 458 GINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF-NSMQLD 635
           ++ G+AQ+G  +EA++++  M  SGVK +  TFV+ L+A ++   +  G +I    ++  
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           H  E  + +   +I   G+ G F +A+M   EM  +++ V W  +++SC  H 
Sbjct: 578 HSFETEVGN--ALISLYGKCGSFEDAKMEFSEMSERNE-VSWNTIITSCSQHG 627



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 156/613 (25%), Positives = 279/613 (45%), Gaps = 92/613 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS--AQ 64
           G+L+HA   ++G   + F+ N +I LY +C +   A+ +F  MPH+D  ++N ++S  AQ
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ 221

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
           C                                 G  E AL ++ +M   G  P  +T++
Sbjct: 222 C---------------------------------GHGEHALEIFEEMQFSGLSPDCVTIS 248

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  A  +L D++ G + H  + K G+  +  +  +LL LY KCG  + A+ +F      
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V +  M+    + + + ++ E+F  M    +  +  +   +L  C    C  E D+  
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCT---CTREIDL-- 363

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+Q+H L++K GFE+D+++S  L+DMY+K G ++ A  +   L E+ VV
Sbjct: 364 -----------GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           SW  MIAGY Q      A+   + M+ CG  PD +   + +  C                
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               R G I+     F+ +      +WN ++S ++QS  H+EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           K+F  M   GVK +  T    LS+ A +  ++ GKQ+HA  +KT    +  V + LI +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            KC   E A+  F  + E + V WN++I   S +   +EA   F QM++  + P   +F 
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVN---DIFVGSALIEMYCKCGDIYGARQFFDMM 566
            VL++C+ +    +G      +  +  +    D +  + +I+++ + G +  A++F + M
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHY--ACVIDIFGRAGQLDRAKKFIEEM 710

Query: 567 H-GKNTVTWNEMI 578
               + + W  ++
Sbjct: 711 PIAADAMVWRTLL 723



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 139/645 (21%), Positives = 275/645 (42%), Gaps = 100/645 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH+++ + G+  D  +   L++LY KC                              
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCG----------------------------- 293

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+E A  +F+     NVV WN ++ A  +     K+  ++ +M   G  P   T   +
Sbjct: 294 --DVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCI 351

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +  T   +++ G + H L +K G + ++YV+  L+ +Y+K GW + A  V E + E + 
Sbjct: 352 LRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDV 411

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T+M++G  + +   +AL  F+ M +  +  D++ L+S +  CA    G+ +      
Sbjct: 412 VSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA----GINA------ 461

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q+H      G+  D+ + N+L+++YA+ G +  A   F  +  +  ++W
Sbjct: 462 ------MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITW 515

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N +++G+ Q     +A+++  RM   G + +  T ++ L A     +IK G+++      
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK 575

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F  M   +  SWN +++S SQ     EA+ L
Sbjct: 576 TGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDL 635

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA---SLKTASHIDNYVASGLIGI 448
           F +M+  G+KP+  T   +L++C+ +G++E G     +           D+Y    +I I
Sbjct: 636 FDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC--VIDI 693

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           + +  + + A++    +P   D + W ++++   ++  +IE   F  +    E+ P   +
Sbjct: 694 FGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHK-NIEVGEFAAK-HLLELEPHDSA 751

Query: 508 FATVLSSCAKLSSSFQGR-QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
              +LS+   ++  +  R QV   +   G   +   G + IE+     ++  A    D +
Sbjct: 752 SYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKE--PGRSWIEV----KNVVHAFFVGDRL 805

Query: 567 HGKNTVTWNEMI---HGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           H      +N +       A+ GY  E   L+ D    G  P D+ 
Sbjct: 806 HPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLV 850


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/729 (33%), Positives = 385/729 (52%), Gaps = 60/729 (8%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+YS N ++           A ++F+E+  R+ VSW  ++S   +NGL E+AL +Y +M 
Sbjct: 85  DLYSKNGLVLP---------ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMH 135

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             G VPT   L+SV  + T       GR  H    K G    I+V NA+++LY +CG  +
Sbjct: 136 RAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFR 195

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF +M   + VTF  ++SG A+      ALE+F  M    +S D V++SS+L  CA
Sbjct: 196 LAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACA 255

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G     D+             G Q+H    K G  +D  +  SLLD+Y K GD+++A 
Sbjct: 256 SLG-----DL-----------QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---- 348
           VIF++    +VV WN+M+  +GQ     K+ EL  +M++ G  P++ T   +L  C    
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359

Query: 349 -------VRSGDIKTG------------------------REMFDSMPSPSVSSWNAMLS 377
                  + S  +KTG                        R + + +    V SW +M++
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y Q E  K+A+  F+EMQ  G+ PD   LA  +S CA +  +  G Q+HA    +    
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D  + + L+ +Y++C R   A   F  I   D + WN +++G + + L  EA   F +M 
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD 539

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           Q+ +    F+F + LS+ A L+   QG+Q+HA++ K G+  +  VG+ALI +Y KCG   
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A+  F  M  +N V+WN +I   +Q+G G EA+ L+  M   G+KP+D+TF+ +L ACS
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACS 659

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           H GLV+ G+  F SM  ++G+ P  DHY C+ID  GRAG    A+  I+EMP   D ++W
Sbjct: 660 HVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVW 719

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
             LLS+C++H N+ + + AA+ L  L+P +SA Y LL+N Y+   +W +   VR++M + 
Sbjct: 720 RTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDR 779

Query: 738 CIVKDPAYS 746
            + K+P  S
Sbjct: 780 GVRKEPGRS 788



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 193/653 (29%), Positives = 326/653 (49%), Gaps = 70/653 (10%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE--GFVPTHITLASVFKASTALLDVE 137
           M  R   S    ++  + +    K LS++   + +  G  P  +  A   +A        
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRG----- 53

Query: 138 HGRR------CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
           +GRR       H   +  GL K   V N L+ LY+K G    A  VFEE+S  + V++ A
Sbjct: 54  NGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVA 113

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           M+SG A+     EAL ++R M R  V      LSSVL  C +      +++FAQ      
Sbjct: 114 MLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK------AELFAQ------ 161

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G+ +H    K GF +++ + N+++ +Y + G    AE +F ++P R  V++N +I+
Sbjct: 162 ----GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLIS 217

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------------- 348
           G+ Q      A+E+ + M+  G  PD VT  ++L AC                       
Sbjct: 218 GHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISS 277

Query: 349 ------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                       V+ GD++T   +F+S    +V  WN ML ++ Q  +  ++ +LF +MQ
Sbjct: 278 DYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQ 337

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
             G++P++ T   IL +C     ++ G+Q+H+ S+KT    D YV+  LI +YSK    E
Sbjct: 338 AAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLE 397

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A RV   + E D+V W SMIAG   +    +A   FK+M++  ++P     A+ +S CA
Sbjct: 398 KARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
            +++  QG Q+HA+I   GY  D+ + +AL+ +Y +CG I  A   F+ +  K+ +TWN 
Sbjct: 458 GINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF-NSMQLD 635
           ++ G+AQ+G  +EA++++  M  SGVK +  TFV+ L+A ++   +  G +I    ++  
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           H  E  + +   +I   G+ G F +A+M   EM  +++ V W  +++SC  H 
Sbjct: 578 HSFETEVGN--ALISLYGKCGSFEDAKMEFSEMSERNE-VSWNTIITSCSQHG 627



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 156/613 (25%), Positives = 279/613 (45%), Gaps = 92/613 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS--AQ 64
           G+L+HA   ++G   + F+ N +I LY +C +   A+ +F  MPH+D  ++N ++S  AQ
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ 221

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
           C                                 G  E AL ++ +M   G  P  +T++
Sbjct: 222 C---------------------------------GHGEHALEIFEEMQFSGLSPDCVTIS 248

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  A  +L D++ G + H  + K G+  +  +  +LL LY KCG  + A+ +F      
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V +  M+    + + + ++ E+F  M    +  +  +   +L  C    C  E D+  
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCT---CTREIDL-- 363

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+Q+H L++K GFE+D+++S  L+DMY+K G ++ A  +   L E+ VV
Sbjct: 364 -----------GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           SW  MIAGY Q      A+   + M+ CG  PD +   + +  C                
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               R G I+     F+ +      +WN ++S ++QS  H+EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           K+F  M   GVK +  T    LS+ A +  ++ GKQ+HA  +KT    +  V + LI +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            KC   E A+  F  + E + V WN++I   S +   +EA   F QM++  + P   +F 
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVN---DIFVGSALIEMYCKCGDIYGARQFFDMM 566
            VL++C+ +    +G      +  +  +    D +  + +I+++ + G +  A++F + M
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHY--ACVIDIFGRAGQLDRAKKFIEEM 710

Query: 567 H-GKNTVTWNEMI 578
               + + W  ++
Sbjct: 711 PIAADAMVWRTLL 723



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 139/645 (21%), Positives = 275/645 (42%), Gaps = 100/645 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH+++ + G+  D  +   L++LY KC                              
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCG----------------------------- 293

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+E A  +F+     NVV WN ++ A  +     K+  ++ +M   G  P   T   +
Sbjct: 294 --DVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCI 351

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +  T   +++ G + H L +K G + ++YV+  L+ +Y+K GW + A  V E + E + 
Sbjct: 352 LRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDV 411

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T+M++G  + +   +AL  F+ M +  +  D++ L+S +  CA    G+ +      
Sbjct: 412 VSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA----GINA------ 461

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q+H      G+  D+ + N+L+++YA+ G +  A   F  +  +  ++W
Sbjct: 462 ------MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITW 515

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N +++G+ Q     +A+++  RM   G + +  T ++ L A     +IK G+++      
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK 575

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F  M   +  SWN +++S SQ     EA+ L
Sbjct: 576 TGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDL 635

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA---SLKTASHIDNYVASGLIGI 448
           F +M+  G+KP+  T   +L++C+ +G++E G     +           D+Y    +I I
Sbjct: 636 FDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC--VIDI 693

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           + +  + + A++    +P   D + W ++++   ++  +IE   F  +    E+ P   +
Sbjct: 694 FGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHK-NIEVGEFAAK-HLLELEPHDSA 751

Query: 508 FATVLSSCAKLSSSFQGR-QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
              +LS+   ++  +  R QV   +   G   +   G + IE+     ++  A    D +
Sbjct: 752 SYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKE--PGRSWIEV----KNVVHAFFVGDRL 805

Query: 567 HGKNTVTWNEMI---HGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           H      +N +       A+ GY  E   L+ D    G  P D+ 
Sbjct: 806 HPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLV 850


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/772 (32%), Positives = 400/772 (51%), Gaps = 82/772 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA I+ +GL     + N LI LY+K                      N ++ +      
Sbjct: 134 IHARIICHGLLCSPIISNPLIGLYAK----------------------NGLIIS------ 165

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
              A K+FD +  ++ VSW  +IS   +NG EE+A+ ++ +M   G  PT    +SV   
Sbjct: 166 ---ARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSG 222

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            T +   + G + H LV K G     YV NAL++LY++      A  VF +M   +EV+F
Sbjct: 223 CTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSF 282

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            +++SGLA+      ALE+F  M R  +  D V+++S+L  CA  G   +          
Sbjct: 283 NSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCK---------- 332

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+Q+H   IK G  +D+ +  +LLD+Y    D+ +A  +F      +VV WNVM
Sbjct: 333 ------GEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVM 386

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD-----------IKTGR 358
           +  +G+    +++  + ++M+  G  P++ T  ++L  C   G            IKTG 
Sbjct: 387 LVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGF 446

Query: 359 E------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           +                        +  ++    V SW A++S Y+Q     EA+K F+E
Sbjct: 447 QFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKE 506

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M  RG++ D    +  +S+CA +  L  G+Q+HA S  +    D  + + L+ +Y++C R
Sbjct: 507 MLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGR 566

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A   F +I   D + WN +I+G + +    +A   F QM + ++  + F+F + +S+
Sbjct: 567 IKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSA 626

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
            A +++  QG+Q+HA I K G+ +DI V +ALI  Y KCG I  AR+ F  M  KN V+W
Sbjct: 627 AANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSW 686

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI GY+Q+GYG+EAV L++ M   G  P+ +TFV +L+ACSH GLV  G+  F SM  
Sbjct: 687 NAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSK 746

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           +HG+ P   HY C++D + RAG    A   I+EMP + D  IW  LLS+C +H NV + +
Sbjct: 747 EHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGE 806

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA+ L  L+P++SA Y LL+N+Y+  G+WD     R++M    + K+P  S
Sbjct: 807 FAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRS 858



 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 201/720 (27%), Positives = 359/720 (49%), Gaps = 85/720 (11%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V  K LH  IL+ G  +++ LCN+L+++Y                               
Sbjct: 27  VECKKLHGKILKLGFGNESVLCNKLVDVYFALG--------------------------- 59

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
               DL+   K+F++MP R+V SW+ +IS  +   +  + L +++ M  E   PT I+ A
Sbjct: 60  ----DLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFA 115

Query: 125 SVFKASTA-LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           SV +A +   + + +  + H  +I  GL  +  ++N L+ LYAK G    A  VF+ +  
Sbjct: 116 SVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCT 175

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + V++ AM+SG ++     EA+ +F  M    +       SSVL  C +       DV 
Sbjct: 176 KDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKL---FDV- 231

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q+H L  K G   + ++ N+L+ +Y++  +  SAE +FS +  +  
Sbjct: 232 ------------GEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDE 279

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG----------- 352
           VS+N +I+G  Q+  S  A+EL  +MK    +PD VT  ++L AC  +G           
Sbjct: 280 VSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSY 339

Query: 353 ------------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                   DIKT  EMF +  + +V  WN ML ++ + +N  E+
Sbjct: 340 VIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSES 399

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
            ++FR+MQ +G+ P++ T   IL +C ++G L+ G+Q+H   +KT    + YV S LI +
Sbjct: 400 FRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDM 459

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+K  + + A  +   + E D+V W ++I+G + ++L  EA   FK+M    +      F
Sbjct: 460 YAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGF 519

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           ++ +S+CA + +  QGRQ+HAQ    GY  D+ +G+AL+ +Y +CG I  A   F+ +  
Sbjct: 520 SSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDA 579

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           K++++WN +I G+AQ+GY ++A++++  M  + ++    TF + ++A ++   +  G +I
Sbjct: 580 KDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQI 639

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
            ++M +  G +  ++    +I    + G   +A     EMP K+D V W  +++    H 
Sbjct: 640 -HAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKND-VSWNAMITGYSQHG 697



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 165/596 (27%), Positives = 272/596 (45%), Gaps = 83/596 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA + + G   +T++CN L+ LYS+  N  SA+ +F KM  KD  S+N+       
Sbjct: 232 GEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNS------- 284

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LIS L + G  + AL ++ KM  +   P  +T+AS+
Sbjct: 285 ------------------------LISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASL 320

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  +   +  G + H  VIK G+  ++ V  ALL LY  C   K A  +F      N 
Sbjct: 321 LSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENV 380

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +  M+    K D + E+  +FR M  K +  +  +  S+L  C   G     D+    
Sbjct: 381 VLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGA---LDL---- 433

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+Q+H   IK GF+ ++++ + L+DMYAK+G +D+A VI   L E  VVSW
Sbjct: 434 ---------GEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSW 484

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
             +I+GY Q     +A++  + M + G + D +   + + AC                  
Sbjct: 485 TALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYV 544

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             R G IK     F+ + +    SWN ++S ++QS   ++A+K+
Sbjct: 545 SGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKV 604

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +M    ++    T    +S+ A +  ++ GKQ+HA  +K     D  V++ LI  Y+K
Sbjct: 605 FAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAK 664

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E A R F  +PE + V WN+MI G S +    EA   F++M+Q    P   +F  V
Sbjct: 665 CGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGV 724

Query: 512 LSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           LS+C+ +    +G      + K+ G V      + ++++  + G +  AR+F + M
Sbjct: 725 LSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEM 780



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 159/600 (26%), Positives = 281/600 (46%), Gaps = 57/600 (9%)

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
           T+I L  +   S +L++    ++ HG ++K+G      + N L+ +Y   G     V VF
Sbjct: 12  TYIWLLDLCLNSGSLVEC---KKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           E+M   +  ++  ++SG  +       L++F  MI + VS   +S +SVL  C+    G+
Sbjct: 69  EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGI 128

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                           + +Q+H   I  G      +SN L+ +YAKNG + SA  +F NL
Sbjct: 129 R---------------YAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNL 173

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------- 349
             +  VSW  MI+G+ Q     +AI L   M + G  P      ++L  C          
Sbjct: 174 CTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGE 233

Query: 350 --------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                     R  +  +  ++F  M S    S+N+++S  +Q  
Sbjct: 234 QLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQG 293

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
               A++LF +M+   +KPD  T+A +LS+CA+ G L  G+Q+H+  +K     D  V  
Sbjct: 294 FSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEG 353

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS-LNSLDIEAFMFFKQMRQNEMY 502
            L+ +Y  C   + A  +F      ++V WN M+     L++L  E+F  F+QM+   + 
Sbjct: 354 ALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLS-ESFRIFRQMQIKGLI 412

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P QF++ ++L +C  + +   G Q+H Q+ K G+  +++V S LI+MY K G +  A   
Sbjct: 413 PNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVI 472

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
              +   + V+W  +I GYAQ+    EA++ +K+M+  G++ D+I F + ++AC+    +
Sbjct: 473 LRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQAL 532

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           + G +I ++     G    L     ++    R G   EA +  +++  KD  + W  L+S
Sbjct: 533 NQGRQI-HAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDS-ISWNGLIS 590



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 141/282 (50%), Gaps = 6/282 (2%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+ RG+  +  T   +L  C   G L   K++H   LK     ++ + + L+ +Y     
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            +   +VF  +P   +  W+ +I+G     +       F  M +  + PT+ SFA+VL +
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 515 CAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           C+      +   Q+HA+I   G +    + + LI +Y K G I  AR+ FD +  K++V+
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W  MI G++QNGY +EA+ L+ +M  +G+ P    F ++L+ C+   L DVG E  +++ 
Sbjct: 181 WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVG-EQLHALV 239

Query: 634 LDHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDD 673
             +G    L+ Y C  ++    R  +F  AE +  +M  KD+
Sbjct: 240 FKYGSS--LETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDE 279


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/773 (31%), Positives = 412/773 (53%), Gaps = 80/773 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+++  L+NG F + ++   +I+L++K                             C 
Sbjct: 166 GELVYSLALKNGFFSNGYVRAGMIDLFAKL----------------------------CS 197

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            +D   A ++F ++   NVV WN +IS  V+N     AL ++ +M    F+P   T +S+
Sbjct: 198 FED---ALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSI 254

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  AL ++E GR   G VIK G  ++++V  A++ LYAKC     AV  F  M   N 
Sbjct: 255 LTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNV 314

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T ++SG  + D  + A   F+ M +    I++ +++SVL  C  E   ++  V    
Sbjct: 315 VSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACT-EPVMIKEAV---- 369

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE-RSVVS 305
                      Q+H    K GF  D ++S++L++MY+K G +D +E +F  +   +++  
Sbjct: 370 -----------QLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAM 418

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS-----------INMLVACV----- 349
           W VMI+ + Q   + +A+EL QRM   G  PD+  S           +  L+ C      
Sbjct: 419 WAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSLGRLIHCYILKIG 478

Query: 350 ----------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                           + G ++    +F+ MP     SW +M++ +S+ ++ ++A++LFR
Sbjct: 479 LFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFR 538

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           EM    ++PD+ TL   L++C+A+  LE GK+VH  +L+     +  V   L+ +YSKC 
Sbjct: 539 EMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCG 598

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
              LA RVF  +P+ D    +S+++G + N    +A + F ++R  +++   F+ ++V+ 
Sbjct: 599 AIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIG 658

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           + A L+S   G Q+HA + K G   ++ VGS+L+ MY KCG I    + F+ +   + ++
Sbjct: 659 AVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLIS 718

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W  MI  YAQ+G G EA+++Y  M   G KPD +TFV +L+ACSH+G+V+ G    NSM 
Sbjct: 719 WTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMA 778

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
            ++G+EP   HY CM+D LGR+G   EAE  I+ MP + D ++W +LL++C++H ++ L 
Sbjct: 779 KEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELG 838

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + AA+ +  L+P  +  Y  L+NI + +G W+D+  +R LM    + K+P +S
Sbjct: 839 RLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWS 891



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 201/718 (27%), Positives = 337/718 (46%), Gaps = 89/718 (12%)

Query: 8   KLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           K+LHAH L+  +   +TF+ N L+  Y                               CK
Sbjct: 65  KILHAHFLKTAILQSNTFMTNSLMGWY-------------------------------CK 93

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S+ +  A +LFD+ P  NV+SWN LIS   +N   E +   + KM   GF P   T  SV
Sbjct: 94  SNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSV 153

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A TAL    +G   + L +K G   N YV   ++ L+AK    + A+ VF+++   N 
Sbjct: 154 LSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENV 213

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + A++SG  K      AL++F  M  +    +S + SS+L  CA           A  
Sbjct: 214 VCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACA-----------ALE 262

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           + +F R V G  + C     G   D+ +  +++D+YAK  DMD A   F  +P R+VVSW
Sbjct: 263 ELEFGRGVQGWVIKC-----GAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSW 317

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGDIK 355
             +I+G+ QK  S  A    + M+  G + +  T  ++L AC           + S   K
Sbjct: 318 TTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFK 377

Query: 356 TG------------------------REMFDSMPSP-SVSSWNAMLSSYSQSENHKEAIK 390
           TG                          +F  M S  +++ W  M+S+++QS +   A++
Sbjct: 378 TGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVE 437

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF+ M   G++PD+   + +LS   ++ +   G+ +H   LK     D  V S L  +YS
Sbjct: 438 LFQRMLQEGLRPDKFCSSSVLSIIDSLSL---GRLIHCYILKIGLFTDISVGSSLFTMYS 494

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   E +  VF ++P+ D V W SMI G S +    +A   F++M   E+ P Q +   
Sbjct: 495 KCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTA 554

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
            L++C+ L S  +G++VH    +     ++ VG AL+ MY KCG I  AR+ FDM+  K+
Sbjct: 555 ALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKD 614

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
             + + ++ GYAQNGY ++A+ L+ ++  + +  D  T  +++ A +    +D+G ++ +
Sbjct: 615 QFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQL-H 673

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           +     G+   +   + ++    + G   E   + +++  K D + W  ++ S   H 
Sbjct: 674 ACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIE-KPDLISWTAMIVSYAQHG 730



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 155/607 (25%), Positives = 283/607 (46%), Gaps = 67/607 (11%)

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRC--------HGLVIKIG-LDKNIYVANALL 162
           ++E F  TH T+   F       D     RC        H   +K   L  N ++ N+L+
Sbjct: 29  NSENFHSTHDTVLPPFDPFHFFSDYTKSGRCTLRNTKILHAHFLKTAILQSNTFMTNSLM 88

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
             Y K     HA+ +F++   PN +++  ++SG  +     ++   F  M       +  
Sbjct: 89  GWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQF 148

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
           +  SVL  C   G                  ++G+ V+ L +K GF ++ ++   ++D++
Sbjct: 149 TYGSVLSACTALG----------------SPLYGELVYSLALKNGFFSNGYVRAGMIDLF 192

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           AK    + A  +F ++   +VV WN +I+G  +  ++  A++L  +M    F P+  T  
Sbjct: 193 AKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFS 252

Query: 343 NMLVACVRSGDIKTGREM-----------------------------------FDSMPSP 367
           ++L AC    +++ GR +                                   F  MP  
Sbjct: 253 SILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIR 312

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +V SW  ++S + Q ++   A   F+EM+  G K +  T+  +L++C    +++   Q+H
Sbjct: 313 NVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLH 372

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLD 486
           +   KT  ++D+ V+S LI +YSK    +L+ERVF  +    ++  W  MI+  + +   
Sbjct: 373 SWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGST 432

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
             A   F++M Q  + P +F  ++VLS    LS    GR +H  I K G   DI VGS+L
Sbjct: 433 GRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLS---LGRLIHCYILKIGLFTDISVGSSL 489

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
             MY KCG +  +   F+ M  K+ V+W  MI G++++ + ++AV+L+++M+   ++PD 
Sbjct: 490 FTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQ 549

Query: 607 ITFVAILTACSHSGLVDVGVEIFN-SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
           +T  A LTACS    ++ G E+   +++   G E ++     +++   + G    A  + 
Sbjct: 550 MTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVG--GALVNMYSKCGAIVLARRVF 607

Query: 666 DEMPCKD 672
           D +P KD
Sbjct: 608 DMLPQKD 614



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 197/379 (51%), Gaps = 8/379 (2%)

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           +S  +     +FD  P P+V SWN ++S  +Q+ + +++ + F +M+F G  P++ T   
Sbjct: 93  KSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGS 152

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +LS+C A+G    G+ V++ +LK     + YV +G+I +++K    E A RVF  +   +
Sbjct: 153 VLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCEN 212

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +VCWN++I+G   N  +  A   F QM      P  F+F+++L++CA L     GR V  
Sbjct: 213 VVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQG 272

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            + K G   D+FVG+A+I++Y KC D+  A + F  M  +N V+W  +I G+ Q      
Sbjct: 273 WVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSIS 332

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A   +K+M   G K ++ T  ++LTAC+   ++   V++ +S     G     +  + +I
Sbjct: 333 AFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQL-HSWIFKTGFYLDSNVSSALI 391

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN----VRLAKRAAEELFRLDP 705
           +   + G    +E +  EM    +  +W V++S+     +    V L +R  +E  R  P
Sbjct: 392 NMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLR--P 449

Query: 706 KNSAPYSLLANIYS-SLGR 723
                 S+L+ I S SLGR
Sbjct: 450 DKFCSSSVLSIIDSLSLGR 468


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 255/775 (32%), Positives = 394/775 (50%), Gaps = 81/775 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HAHI+++G   D  +   L+ +Y KC +   AQ                       
Sbjct: 238 GKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQ----------------------- 274

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +FD+M ERNV+SW  +I  L   G  ++A  ++ +M  EGF+P   T  S+
Sbjct: 275 --------LIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSI 326

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A+ +   +E  +  H   +  GL  ++ V NAL+ +YAK G    A  VF+ M+E + 
Sbjct: 327 LNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDI 386

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++T M+ GLA+  R  EA  +F  M R     +  +  S+L   A         + + S
Sbjct: 387 FSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASA---------IASTS 437

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             ++ + VH         + GF +DL + N+L+ MYAK G +D A ++F  + +R V+SW
Sbjct: 438 ALEWVKVVHKH-----AEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISW 492

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA------------------- 347
           N M+ G  Q     +A  +  +M+  G  PD  T +++L                     
Sbjct: 493 NAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVE 552

Query: 348 ----------------CVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                            +R G I   R +FD +    V++WNAM+   +Q    +EA+ L
Sbjct: 553 TGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSL 612

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +MQ  G  PD TT   ILS+      LE  K+VH+ +   A  +D  V + L+  YSK
Sbjct: 613 FLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHA-TDAGLVDLRVGNALVHTYSK 671

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   + A++VF  + E ++  W  MI GL+ +    +AF  F QM +  + P   ++ ++
Sbjct: 672 CGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSI 731

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS+CA   +    ++VH      G V+D+ VG+AL+ MY KCG I  AR  FD M  ++ 
Sbjct: 732 LSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDV 791

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
            +W  MI G AQ+G G EA+  +  M + G KP+  ++VA+LTACSH+GLVD G   F S
Sbjct: 792 FSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLS 851

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M  D+G+EP ++HYTCM+D LGRAG   EAE+ I  MP + D   W  LL +C  + N+ 
Sbjct: 852 MTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLE 911

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +A+ AA+E  +L PK+++ Y LL+NIY++ G+W+    VR +M    I K+P  S
Sbjct: 912 MAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRS 966



 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 200/718 (27%), Positives = 331/718 (46%), Gaps = 87/718 (12%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H  I+++G+  + ++ N+L+ +Y +C     A+ +FDK+  K+IY W          
Sbjct: 138 KQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIW---------- 187

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                                  +I      G  E A+ VY+KM  E   P  IT  S+ 
Sbjct: 188 ---------------------TTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSIL 226

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA    ++++ G++ H  +I+ G   ++ V  AL+++Y KCG  + A  +F++M E N +
Sbjct: 227 KACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVI 286

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++T M+ GLA   R  EA  +F  M R+    +S +  S+L   A  G            
Sbjct: 287 SWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGA----------- 335

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
            ++ + VH   V+      G   DL + N+L+ MYAK+G +D A V+F  + ER + SW 
Sbjct: 336 LEWVKEVHSHAVNA-----GLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWT 390

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------- 348
           VMI G  Q  +  +A  L  +M+  G  P+  T +++L A                    
Sbjct: 391 VMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAE 450

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G I   R +FD M    V SWNAM+   +Q+    EA  
Sbjct: 451 EAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFT 510

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +F +MQ  G+ PD TT   +L++  +   LE   +VH  +++T    D  V S  I +Y 
Sbjct: 511 VFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYI 570

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           +C   + A  +F ++    +  WN+MI G +      EA   F QM++    P   +F  
Sbjct: 571 RCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFIN 630

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +LS+     +    ++VH+     G V D+ VG+AL+  Y KCG++  A+Q FD M  +N
Sbjct: 631 ILSANVDEEALEWVKEVHSHATDAGLV-DLRVGNALVHTYSKCGNVKYAKQVFDDMVERN 689

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
             TW  MI G AQ+G G +A   +  M+  G+ PD  T+V+IL+AC+ +G ++   E+ N
Sbjct: 690 VTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHN 749

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
              +  G+   L     ++    + G   +A  + D+M  + D   W V++     H 
Sbjct: 750 H-AVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDM-VERDVFSWTVMIGGLAQHG 805



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 191/684 (27%), Positives = 315/684 (46%), Gaps = 110/684 (16%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D+   ++ H  +IK G+++N+YVAN LL +Y +CG  + A  VF+++ + N   +T M+ 
Sbjct: 133 DILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIG 192

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G A+     +A+ ++  M ++    + ++  S+L  C    C V                
Sbjct: 193 GYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC---CPVNLK------------- 236

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+++H   I+ GF++D+ +  +L++MY K G ++ A++IF  + ER+V+SW VMI G  
Sbjct: 237 WGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLA 296

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--------------------------- 347
              +  +A  L  +M+  GF P+  T +++L A                           
Sbjct: 297 HYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLR 356

Query: 348 --------CVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                     +SG I   R +FD M    + SW  M+   +Q    +EA  LF +MQ  G
Sbjct: 357 VGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNG 416

Query: 400 VKPDRTTLAIIL--SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
             P+ TT   IL  S+ A+   LE  K VH  + +     D  + + LI +Y+KC   + 
Sbjct: 417 CLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDD 476

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A  VF  + + D++ WN+M+ GL+ N    EAF  F QM+Q  + P   ++ ++L++   
Sbjct: 477 ARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGS 536

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
             +     +VH    + G ++D  VGSA I MY +CG I  AR  FD +  ++  TWN M
Sbjct: 537 TDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAM 596

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA----------------CSHSGL 621
           I G AQ   G EA+ L+  M   G  PD  TF+ IL+A                 + +GL
Sbjct: 597 IGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL 656

Query: 622 VDVGV------------------EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA-- 661
           VD+ V                  ++F+ M     VE  +  +T MI  L + G  H+A  
Sbjct: 657 VDLRVGNALVHTYSKCGNVKYAKQVFDDM-----VERNVTTWTMMIGGLAQHGCGHDAFS 711

Query: 662 ---EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR------AAEELFRLDPKNSAPYS 712
              +ML + +    D   +  +LS+C     +   K       +A  +  L   N+    
Sbjct: 712 HFLQMLREGIV--PDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNA---- 765

Query: 713 LLANIYSSLGRWDDLRAVRELMSE 736
            L ++Y+  G  DD R+V + M E
Sbjct: 766 -LVHMYAKCGSIDDARSVFDDMVE 788



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 171/341 (50%), Gaps = 7/341 (2%)

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN---HKEAIKLFREMQFRGVKPDRTTL 407
           SG  K+ +  +  +PS  V +  ++  +  Q+ N    K+A+ + +    +G+  D  + 
Sbjct: 64  SGCFKSEKHKY--LPSVLVCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSY 121

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
             IL  C     +   KQVH   +K+    + YVA+ L+ +Y +C R + A +VF ++ +
Sbjct: 122 VNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLK 181

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            +I  W +MI G +      +A   + +MRQ    P + ++ ++L +C    +   G+++
Sbjct: 182 KNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKI 241

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           HA I + G+ +D+ V +AL+ MY KCG I  A+  FD M  +N ++W  MI G A  G G
Sbjct: 242 HAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRG 301

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
            EA  L+  M   G  P+  T+V+IL A + +G ++   E+ +S  ++ G+   L     
Sbjct: 302 QEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEV-HSHAVNAGLALDLRVGNA 360

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           ++    ++G   +A ++ D M  + D   W V++     H 
Sbjct: 361 LVHMYAKSGSIDDARVVFDGMT-ERDIFSWTVMIGGLAQHG 400


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 249/777 (32%), Positives = 397/777 (51%), Gaps = 88/777 (11%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           HA  + +GL  D FL N L+  YSK      A+                           
Sbjct: 53  HARAVVSGLLPDLFLANLLLRGYSKLGRLGDAR--------------------------- 85

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY------NKMSNEGFVPTHITLA 124
               +LFD MP RN+VSW + IS   ++G E+ AL ++         S +G  P    LA
Sbjct: 86  ----RLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLA 141

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S  +A         G + HG+  K+GLD N++V  AL++LYAK G    A+ VF+ +   
Sbjct: 142 SALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPAR 201

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N VT+TA+++G ++  +   ALE+F  M    V  D   L+S    C+  G       F 
Sbjct: 202 NPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLG-------FV 254

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           +          G+Q+H    +   E+D  + N+L+D+Y K   +  A  +F ++  R++V
Sbjct: 255 EG---------GRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLV 305

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           SW  MIAGY Q    T+A+ +  ++   G++PD     ++L +C     I  GR++    
Sbjct: 306 SWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHV 365

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          F+++      S+NAM+  Y++  +   A+
Sbjct: 366 IKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAV 425

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           ++F +M++  +KP   T   +L   ++   LE  KQ+H   +K+ + +D Y  S LI +Y
Sbjct: 426 EIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVY 485

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           SK    + A+ VF  +   D+V WN+MI GL+ N    EA   F ++R + + P +F+F 
Sbjct: 486 SKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFV 545

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
            +++  + L+S F G+Q HAQI K G  +D  + +ALI+MY KCG I   R  F+   GK
Sbjct: 546 ALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGK 605

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + + WN MI  YAQ+G+ +EA+ ++  M  +GV+P+ +TFV++L+AC+H+GLVD G+  F
Sbjct: 606 DVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHF 665

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           NSM+  + VEP  +HY  +++  GR+G  H A+  I+ MP +    IW  LLS+C L  N
Sbjct: 666 NSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGN 725

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           V + + A E     DP +S P  L++NIY+S G W D + +R+ M    +VK+P YS
Sbjct: 726 VEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYS 782



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 158/638 (24%), Positives = 283/638 (44%), Gaps = 88/638 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H    + GL  + F+   L+ LY+K     +A  +FD +P ++  +W A+++   +
Sbjct: 156 GEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQ 215

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +                               G    AL ++ +M  +G  P    LAS 
Sbjct: 216 A-------------------------------GQAGVALELFGRMGLDGVRPDRFVLASA 244

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + L  VE GR+ HG   +   + +  V NAL+ LY KC     A  +F+ M   N 
Sbjct: 245 ASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNL 304

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T M++G  +     EA+ MF  + +     D  + +S+L       CG  + ++   
Sbjct: 305 VSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSIL-----NSCGSLAAIW--- 356

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+QVH   IK   E+D ++ N+L+DMYAK   +  A  +F  L E   +S+
Sbjct: 357 --------QGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISY 408

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VR 350
           N MI GY +    T A+E+  +M+ C  +P  +T +++L                   V+
Sbjct: 409 NAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVK 468

Query: 351 SG---DIKTGREMFDS----------------MPSPSVSSWNAMLSSYSQSENHKEAIKL 391
           SG   D+  G  + D                 M +  +  WNAM+   +Q+E  +EA+KL
Sbjct: 469 SGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKL 528

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F  ++  G+ P+  T   +++  + +  +  G+Q HA  +K  +  D ++++ LI +Y+K
Sbjct: 529 FARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAK 588

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E    +F      D++CWNSMI+  + +    EA   F  M    + P   +F +V
Sbjct: 589 CGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSV 648

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG--SALIEMYCKCGDIYGARQFFDMMHGK 569
           LS+CA      +G   H    K  Y  +      ++++ ++ + G ++ A++F + M  +
Sbjct: 649 LSACAHAGLVDEGLH-HFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIE 707

Query: 570 NTVT-WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
              T W  ++   A + +G+  +  Y   +A    P D
Sbjct: 708 PVATIWRSLLS--ACHLFGNVEIGRYATEMALLADPAD 743



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 247/516 (47%), Gaps = 88/516 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ +H +  R     D  + N LI+LY KC+    A+ LFD M ++             
Sbjct: 256 GGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENR------------- 302

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                             N+VSW  +I+  ++N L+ +A+S++ ++S  G+ P      S
Sbjct: 303 ------------------NLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTS 344

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  +  +L  +  GR+ H  VIK  L+ + YV NAL+ +YAKC     A  VFE ++E +
Sbjct: 345 ILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDD 404

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++ AM+ G A+   +  A+E+F  M   ++    ++  S+LGV +           ++
Sbjct: 405 AISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSS-----------SR 453

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           SD + S+ +HG     L +K G   DL+  ++L+D+Y+K   +D A+++FS +  R +V 
Sbjct: 454 SDLELSKQIHG-----LIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVI 508

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN MI G  Q  +  +A++L  R++  G  P+E T + ++                    
Sbjct: 509 WNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQII 568

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G I+ GR +F+S     V  WN+M+S+Y+Q  + +EA+ 
Sbjct: 569 KAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALH 628

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID---NYVASGLIG 447
           +F  M+  GV+P+  T   +LS+CA  G+++ G   H  S+KT   ++    + AS ++ 
Sbjct: 629 VFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLH-HFNSMKTKYAVEPGTEHYAS-VVN 686

Query: 448 IYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSL 482
           ++ +  +   A+    R+P E     W S+++   L
Sbjct: 687 LFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHL 722



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 115/230 (50%), Gaps = 7/230 (3%)

Query: 406 TLAIILSSCAAMGILESG-KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
           +LA +L SC A   L       HA ++ +    D ++A+ L+  YSK  R   A R+F  
Sbjct: 31  SLAQLLLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDS 90

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM------RQNEMYPTQFSFATVLSSCAKL 518
           +P  ++V W S I+  + +  + +A + F           +   P +F  A+ L +CA+ 
Sbjct: 91  MPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQS 150

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
            ++  G QVH    K G   ++FVG+AL+ +Y K G I  A   FD +  +N VTW  +I
Sbjct: 151 RAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVI 210

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            GY+Q G    A+ L+  M   GV+PD     +  +ACS  G V+ G +I
Sbjct: 211 TGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQI 260


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 250/809 (30%), Positives = 426/809 (52%), Gaps = 80/809 (9%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++AH  GK  HAH++ +G     F+ N L++LY  C N   A  LFD MP +D+ SWNA+
Sbjct: 62  QRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAM 121

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +     S+D+  A   F+ MP R+VVSWN+++S  ++ G   +++ V+ +M   G    +
Sbjct: 122 IFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDN 181

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            + + + K  + L + + G + HG+ +++G D ++   +ALL +YAKC     +  VF  
Sbjct: 182 KSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYA 241

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M + N ++++A+++G  + + +   L+MF+ M +  V +     +SVL  CA        
Sbjct: 242 MPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCA-------- 293

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                 D +      G Q+H   +K  F  D  +  + LDMYAK  +M  A+ +F     
Sbjct: 294 ---TLPDLRL-----GTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSEN 345

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
            ++ S+N MI GY QK    +A+ L +++       DE++    L AC     +  G ++
Sbjct: 346 LNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQL 405

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              FD M      SWNA+++++ Q+E  
Sbjct: 406 HGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEER 465

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            + + +   M   G++PD  T   +L +CA    L  G ++H   +K     + Y+ S L
Sbjct: 466 SKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSL 524

Query: 446 IGIYSKCQRNELAERVFHRI-------------PELD--------------IVCWNSMIA 478
           + +YSKC   + AE++ ++I             PE                IV WN++I+
Sbjct: 525 VDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIIS 584

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G  +     +A  FF +M +  + P +F+++TVL +CA L+S   G+Q+HA + K     
Sbjct: 585 GYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQY 644

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           D+++ S L++MY KCG+++ +R  F+    ++ VTWN MI GYA +G G+EA++L++ M+
Sbjct: 645 DVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMV 704

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
              + P+  TFV++L AC+H GLV+ G++ F+ M+ ++G++P L+HY+ M+D LG++G  
Sbjct: 705 LMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEV 764

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLH-ANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
            +A  LI EMP + D VIW  LLS+C+++  NV  A+ AA  L RLDP++S+ Y LL+NI
Sbjct: 765 EKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNI 824

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y+  G WD    +R  M  + + K+P  S
Sbjct: 825 YADAGMWDKASELRTAMRSDKLKKEPGCS 853



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 177/676 (26%), Positives = 312/676 (46%), Gaps = 98/676 (14%)

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           VFK        E G++ H  +I  G    ++V+N LL LY  CG   +A  +F+ M   +
Sbjct: 55  VFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRD 114

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVF- 243
            V++ AM+ G A ++ +V A   F +M  +    D VS +S+L    + G  +ES  VF 
Sbjct: 115 VVSWNAMIFGYAASNDMVRASLCFEMMPTR----DVVSWNSMLSGFLQTGENLESVKVFI 170

Query: 244 ------AQSDNK-FSRNVH----------GQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
                  + DNK FS  +           G Q+H + +++G++ D+   ++LLDMYAK  
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCK 230

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM----------------K 330
            +D +  +F  +P+++ +SW+ +IAG  Q       +++ + M                K
Sbjct: 231 RLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLK 290

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTG-------------------REMFDSMPSPSVSS 371
           SC   PD      +    ++S  +K G                   + +FD   + ++ S
Sbjct: 291 SCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQS 350

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           +NAM++ YSQ +N   A+ LFR++    +  D  +L+  L +CA +  L  G Q+H  + 
Sbjct: 351 YNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLAT 410

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           K+    +  VA+  I +Y KC+  + A RVF  +   D V WN++IA    N    +   
Sbjct: 411 KSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLN 470

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
               M ++ M P +++F +VL +CA  S +  G ++H  I K G  ++ ++GS+L++MY 
Sbjct: 471 ILVSMLRSGMEPDEYTFGSVLKACAGDSLN-HGMEIHTTIVKLGMASNPYIGSSLVDMYS 529

Query: 552 KCGDIYGAR----QFFDMMHGKNT-----------------------VTWNEMIHGYAQN 584
           KCG I  A     + F  +   NT                       V+WN +I GY   
Sbjct: 530 KCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMR 589

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL-- 642
              ++A R +  M+  G+ PD  T+  +L  C++   + +G +I       H ++  L  
Sbjct: 590 KQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHA-----HVIKKELQY 644

Query: 643 DHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
           D Y C  ++D   + G+ H++ ++ ++ P + D V W  ++     H     A +  E +
Sbjct: 645 DVYICSTLVDMYSKCGNLHDSRLMFEKAPIR-DFVTWNAMICGYAHHGMGEEAIKLFESM 703

Query: 701 FRLD--PKNSAPYSLL 714
             ++  P ++   SLL
Sbjct: 704 VLMNIMPNHATFVSLL 719



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 135/292 (46%), Gaps = 34/292 (11%)

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
            + +   CA     E GKQ HA  + +      +V++ L+ +Y  C     A ++F  +P
Sbjct: 52  FSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMP 111

Query: 467 ELDIVCWNSMIAG----------------------LSLNSL---------DIEAFMFFKQ 495
             D+V WN+MI G                      +S NS+         ++E+   F +
Sbjct: 112 LRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIE 171

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M ++ +     SF+ +L  C+ L +   G Q+H    + GY  D+  GSAL++MY KC  
Sbjct: 172 MGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKR 231

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  +   F  M  KN ++W+ +I G  QN + D  ++++K+M   GV      + ++L +
Sbjct: 232 LDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKS 291

Query: 616 CSHSGLVDVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           C+    + +G ++  ++++ D   + I+   T  +D   +  +  +A+ L D
Sbjct: 292 CATLPDLRLGTQLHAHALKSDFVKDGIVR--TATLDMYAKCNNMQDAQRLFD 341



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 33/209 (15%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +F+ V   CAK  +   G+Q HA +   G+   +FV + L+++Y  CG++  A + FD M
Sbjct: 51  NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110

Query: 567 HGKNTVTWNEMIHGYA-------------------------------QNGYGDEAVRLYK 595
             ++ V+WN MI GYA                               Q G   E+V+++ 
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFI 170

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
           +M  SGV+ D+ +F  IL  CS      +G +I + + L  G +  +   + ++D   + 
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCSILENYKLGTQI-HGIALRMGYDTDVVSGSALLDMYAKC 229

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
               E+  +   MP K + + W  +++ C
Sbjct: 230 KRLDESFTVFYAMPQK-NWISWSAIIAGC 257


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 260/782 (33%), Positives = 400/782 (51%), Gaps = 90/782 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A + G  LHA++L++G      L N LI  YSKC     A+                  
Sbjct: 18  QALLPGAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCAR------------------ 57

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                        ++FDE+P+   VSW++L++A   NGL   A+  ++ M  EG      
Sbjct: 58  -------------RVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEF 104

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            L  V K    + D + G + H + +  G   +++VANAL+++Y   G+   A  VF+E 
Sbjct: 105 ALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEA 161

Query: 182 -SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            SE N V++  +MS   K D+  +A+++F  M+   +       S V+  C         
Sbjct: 162 GSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTG------- 214

Query: 241 DVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                     SRN+  G+QVH + +++G+E D+  +N+L+DMY K G +D A VIF  +P
Sbjct: 215 ----------SRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP 264

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           +  VVSWN +I+G        +AIELL +MKS G  P+     ++L AC  +G    GR+
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQ 324

Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
           +                                   FD M    +  WNA++S  S    
Sbjct: 325 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGR 384

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
           H EA  +F  ++  G+  +RTTLA +L S A++    + +QVHA + K     D +V +G
Sbjct: 385 HDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNG 444

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI  Y KC     A RVF      DI+   SMI  LS       A   F +M +  + P 
Sbjct: 445 LIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPD 504

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            F  +++L++CA LS+  QG+QVHA + K  +++D F G+AL+  Y KCG I  A   F 
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 564

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            +  +  V+W+ MI G AQ+G+G  A+ L+  M+  G+ P+ IT  ++L AC+H+GLVD 
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
               FNSM+   G++   +HY+CMID LGRAG   +A  L++ MP + +  +W  LL + 
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGAS 684

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           R+H +  L K AAE+LF L+P+ S  + LLAN Y+S G W+++  VR+LM ++ I K+PA
Sbjct: 685 RVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPA 744

Query: 745 YS 746
            S
Sbjct: 745 MS 746



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 154/308 (50%), Gaps = 15/308 (4%)

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTA--SHIDNYVASGLIGIYSKCQRNELAERVFH 463
           T++  L+  AA   L  G  +HA  LK+   + + N+    LI  YSKC+R   A RVF 
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHANLLKSGFLASLRNH----LISFYSKCRRPCCARRVFD 61

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            IP+   V W+S++   S N L   A   F  MR   +   +F+   VL     +  +  
Sbjct: 62  EIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQL 118

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG-KNTVTWNEMIHGYA 582
           G QVHA     G+ +D+FV +AL+ MY   G +  AR+ FD     +N V+WN ++  Y 
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 178

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           +N    +A++++ +M+ SG++P +  F  ++ AC+ S  +D G ++ ++M +  G E  +
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQV-HAMVVRMGYEKDV 237

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
                ++D   + G    A ++ ++MP   D V W  L+S C L+ +     RA E L +
Sbjct: 238 FTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH---DHRAIELLLQ 293

Query: 703 LDPKNSAP 710
           +      P
Sbjct: 294 MKSSGLVP 301


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/774 (33%), Positives = 400/774 (51%), Gaps = 84/774 (10%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           ++HA  +  GL +D    N LI+LY+K      A+                         
Sbjct: 63  VIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRAR------------------------- 97

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
                 ++F+++  R+ VSW  ++S   RNGL E+A+ +Y++M   G VPT   L+SV  
Sbjct: 98  ------RVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLS 151

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           A T     E GR  H  V K G      V NAL++LY + G    A  VF EM   + VT
Sbjct: 152 ACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVT 211

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           F  ++S  A+      ALE+F  M     + D V+++S+L  CA  G     D+     N
Sbjct: 212 FNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIG-----DL-----N 261

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
           K      G+Q+H   +K G   D  +  SLLD+Y K G +  A  IF +    +VV WN+
Sbjct: 262 K------GKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNL 315

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI-----------KTG 357
           M+  YGQ     K+ +L  +M + G  P+E T   +L  C  +G+I           KTG
Sbjct: 316 MLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTG 375

Query: 358 ------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                   R + + + +  V SW +M++ Y Q E  KEA++ F+
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFK 435

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           +MQ  G+ PD   LA  +S+CA +  +  G+Q+H+    +    D  + + L+ +Y++C 
Sbjct: 436 DMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCG 495

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
           R++ A  +F  I   D + WN M++G + + L  EA   F +M Q  +    F+F + +S
Sbjct: 496 RSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSIS 555

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR-QFFDMMHGKNTV 572
           + A L+   QG+Q+HA + K G  ++  V +ALI +Y KCG I  A+ QFF+M   +N V
Sbjct: 556 ASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSE-RNHV 614

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +WN +I   +Q+G+G EA+ L+  M   G+KP+D+TF+ +L ACSH GLV+ G+  F SM
Sbjct: 615 SWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSM 674

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
             +HG+ P  DHY C++D LGRAG    A   ++EMP   + ++W  LLS+CR+H N+ +
Sbjct: 675 SSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEI 734

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + AA+ L  L+P +SA Y LL+N Y+  G+W     VR++M +  + K+P  S
Sbjct: 735 GELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRS 788



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 158/613 (25%), Positives = 284/613 (46%), Gaps = 92/613 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS--AQ 64
           G+L+HA + + G   +T + N LI LY +  +   A+ +F +MP+ D  ++N ++S  AQ
Sbjct: 162 GRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQ 221

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
           C                                 G  E AL ++ +M   G+ P  +T+A
Sbjct: 222 C---------------------------------GNGESALEIFEEMRLSGWTPDCVTIA 248

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  A  ++ D+  G++ H  ++K G+  +  +  +LL LY KCG    A+ +F+     
Sbjct: 249 SLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRT 308

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V +  M+    +   + ++ ++F  M+   V  +  +   +L  C   G   E ++  
Sbjct: 309 NVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAG---EINL-- 363

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+Q+H L+IK GFE+D+++S  L+DMY+K G +D A  I   L  + VV
Sbjct: 364 -----------GEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVV 412

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           SW  MIAGY Q     +A+E  + M+  G  PD +   + + AC                
Sbjct: 413 SWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRV 472

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               R G  K    +F+++      +WN M+S ++QS  ++EA+
Sbjct: 473 YVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEAL 532

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           ++F +M   GVK +  T    +S+ A +  ++ GKQ+HA  +KT    +  VA+ LI +Y
Sbjct: 533 EVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLY 592

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            KC   E A+  F  + E + V WN++I   S +   +EA   F QM+Q  + P   +F 
Sbjct: 593 GKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFI 652

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVN---DIFVGSALIEMYCKCGDIYGARQFFDMM 566
            VL++C+ +    +G      +  +  ++   D +  + ++++  + G +  AR+F + M
Sbjct: 653 GVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHY--ACVVDILGRAGQLDRARKFVEEM 710

Query: 567 H-GKNTVTWNEMI 578
               N + W  ++
Sbjct: 711 PVSANAMVWRTLL 723



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 164/321 (51%), Gaps = 7/321 (2%)

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLF--REMQFRGVKPDRTTLAIILSSC-AAMGIL 420
           M   + +S N  L+ +   E+ ++ + LF  +  Q RG+       A  L  C  ++   
Sbjct: 1   MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGL--GSVDFACALRECRGSVKHW 58

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
                +HA ++      D    + LI +Y+K    + A RVF ++   D V W +M++G 
Sbjct: 59  PLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGY 118

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           + N L  EA   + QM  + + PT +  ++VLS+C K +   QGR VHAQ+ K G  ++ 
Sbjct: 119 ARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSET 178

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            VG+ALI +Y + G +  A + F  M   + VT+N +I  +AQ G G+ A+ ++++M  S
Sbjct: 179 VVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLS 238

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G  PD +T  ++L AC+  G ++ G ++ +S  L  G+ P       ++D   + G   E
Sbjct: 239 GWTPDCVTIASLLAACASIGDLNKGKQL-HSYLLKAGMSPDYIIEGSLLDLYVKCGVIVE 297

Query: 661 AEMLIDEMPCKDDPVIWEVLL 681
           A + I +   + + V+W ++L
Sbjct: 298 A-LEIFKSGDRTNVVLWNLML 317



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 136/309 (44%), Gaps = 50/309 (16%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H+ +  +G   D  + N L+ LY++C  +  A  LF+ + HKD  +WN   
Sbjct: 460 KAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNG-- 517

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                        ++S   ++GL E+AL V+ KM   G      
Sbjct: 518 -----------------------------MVSGFAQSGLYEEALEVFIKMYQAGVKYNVF 548

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  S   AS  L D++ G++ H  VIK G      VANAL+SLY KCG  + A   F EM
Sbjct: 549 TFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEM 608

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           SE N V++  +++  ++    +EAL++F  M ++ +  + V+   VL  C+  G   E  
Sbjct: 609 SERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGL 668

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
            + +S +     +H +  H   +              +D+  + G +D A      +P  
Sbjct: 669 GYFKSMSS-EHGIHPRPDHYACV--------------VDILGRAGQLDRARKFVEEMP-- 711

Query: 302 SVVSWNVMI 310
             VS N M+
Sbjct: 712 --VSANAMV 718


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/724 (33%), Positives = 384/724 (53%), Gaps = 51/724 (7%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N ++    K   +  A ++F+E+  R+ VSW  ++S   +NGL E+A+ +Y +M   G V
Sbjct: 81  NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           PT   L+S+  A T     + GR  H  V K G     +V NAL+SLY +C   + A  V
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRV 200

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F +M   + VTF  ++SG A+      AL +F  M    +S DSV+++S+L  C+  G  
Sbjct: 201 FCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVG-- 258

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                    D +      G+Q+H   +K G   D  +  SLLD+Y K+GD++ A  IF +
Sbjct: 259 ---------DLR-----KGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDS 304

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
               +VV WN+M+  YGQ     K+ ++  RM + G  P++ T   ML  C  +G+I  G
Sbjct: 305 GDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLG 364

Query: 358 REM-----------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
            ++                                    D +    V SW +M++ Y Q 
Sbjct: 365 EQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQH 424

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
           E  KEA++ F+EMQ  G+ PD   LA  +S+CA +  +  G Q+HA    +    D  + 
Sbjct: 425 EFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIW 484

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           +GL+ +Y++C  ++ A   F  I   + + WN +I+G + + L  EA   F +M Q    
Sbjct: 485 NGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAK 544

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
              F+F + +S+ A L+   QG+Q+HA++ K GY ++  + +ALI +Y KCG I  A+  
Sbjct: 545 YNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMD 604

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F  M  +N V+WN +I   +Q+G G EA+ L+  M   G+KP D+TFV +LTACSH GLV
Sbjct: 605 FFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLV 664

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           + G+  F SM  +HG+ P  DHY C++D LGRAG    A+  ++EMP   D ++W  LLS
Sbjct: 665 EEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLS 724

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           +C++H N+ + + AA+ L  L+P +SA Y LL+N Y+  G+W     +R++M +  + K+
Sbjct: 725 ACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKE 784

Query: 743 PAYS 746
           P  S
Sbjct: 785 PGRS 788



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 177/650 (27%), Positives = 308/650 (47%), Gaps = 64/650 (9%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           M  R   S+N  ++  +     EK L ++     +  V   +  A   +A         G
Sbjct: 1   MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRG-----SG 55

Query: 140 RR------CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           RR       H   I  GL     + N L+ LYAK G+ + A  VFEE+S  + V++ A++
Sbjct: 56  RRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVL 115

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           SG A+     EA+ ++R M R  V      LSS+L  C +      +++F          
Sbjct: 116 SGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTK------TELFQL-------- 161

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+ +H    K GF ++  + N+L+ +Y +      A+ +F ++     V++N +I+G+
Sbjct: 162 --GRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGH 219

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------------- 348
            Q     +A+ +   M+  G  PD VT  ++L AC                         
Sbjct: 220 AQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDY 279

Query: 349 ----------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                     V+SGDI+   ++FDS    +V  WN ML +Y Q ++  ++  +F  M   
Sbjct: 280 IMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAA 339

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           GV+P++ T   +L +C   G +  G+Q+H+ ++K     D YV+  LI +YSK    + A
Sbjct: 340 GVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKA 399

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
           +R+   I E D+V W SMIAG   +    EA   FK+M+   ++P     A+ +S+CA +
Sbjct: 400 QRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGI 459

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
            +  QG Q+HA++   GY  D+ + + L+ +Y +CG    A   F+ +  K  +TWN +I
Sbjct: 460 KAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLI 519

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            G+AQ+G  +EA++++  M  +G K +  TFV+ ++A ++   +  G +I ++  +  G 
Sbjct: 520 SGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQI-HARVIKTGY 578

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
               +    +I   G+ G   +A+M   EM  K + V W  +++ C  H 
Sbjct: 579 TSETEISNALISLYGKCGSIEDAKMDFFEMT-KRNEVSWNTIITCCSQHG 627



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/546 (26%), Positives = 259/546 (47%), Gaps = 84/546 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+H  + + G F +TF+ N LI LY +C +   A  +F  M + D             
Sbjct: 162 GRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCD------------- 208

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                              V++N LIS   + G  ++AL ++++M   G  P  +T+AS+
Sbjct: 209 ------------------SVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASL 250

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A +A+ D+  G++ H  ++K G+  +  +  +LL LY K G  + A+ +F+     N 
Sbjct: 251 LAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNV 310

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFAQ 245
           V +  M+    + D + ++ ++F  M+   V  +  +   +L  C   G  G+       
Sbjct: 311 VLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGL------- 363

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+Q+H LTIK GF++D+++S  L+DMY+K G +D A+ I   + E+ VVS
Sbjct: 364 ----------GEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVS 413

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           W  MIAGY Q     +A+E  + M++CG  PD +   + + AC                 
Sbjct: 414 WTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVY 473

Query: 350 -------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              R G  K     F+++      +WN ++S ++QS  ++EA+K
Sbjct: 474 VSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALK 533

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +F +M   G K +  T    +S+ A +  ++ GKQ+HA  +KT    +  +++ LI +Y 
Sbjct: 534 VFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYG 593

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   E A+  F  + + + V WN++I   S +   +EA   F QM+Q  + P+  +F  
Sbjct: 594 KCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVG 653

Query: 511 VLSSCA 516
           VL++C+
Sbjct: 654 VLTACS 659



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 195/423 (46%), Gaps = 55/423 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+  ++NG   D ++   LI++YSK                   Y W         
Sbjct: 364 GEQIHSLTIKNGFQSDMYVSGVLIDMYSK-------------------YGW--------- 395

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A ++ D + E++VVSW ++I+  V++   ++AL  + +M   G  P +I LAS 
Sbjct: 396 ---LDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASA 452

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   +  V  G + H  V   G   ++ + N L+ LYA+CG +K A   FE +     
Sbjct: 453 ISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEG 512

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T+  ++SG A++    EAL++F  M +     +  +  S +   A             +
Sbjct: 513 ITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASAN-----------LA 561

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D K      G+Q+H   IK G+ ++  +SN+L+ +Y K G ++ A++ F  + +R+ VSW
Sbjct: 562 DIK-----QGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSW 616

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N +I    Q  +  +A++L  +MK  G +P +VT + +L AC   G ++ G   F SM +
Sbjct: 617 NTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSN 676

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  ++    ++     A +   EM    +  D      +LS+C     LE
Sbjct: 677 EHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMP---IPADSMVWRTLLSACKVHKNLE 733

Query: 422 SGK 424
            G+
Sbjct: 734 IGE 736



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 46/298 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G  +HA +  +G   D  + N L+ LY++C  +  A   F+ + HK+  +WN + 
Sbjct: 460 KAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGL- 518

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                         IS   ++GL E+AL V+ KM   G      
Sbjct: 519 ------------------------------ISGFAQSGLYEEALKVFMKMDQAGAKYNVF 548

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  S   AS  L D++ G++ H  VIK G      ++NAL+SLY KCG  + A   F EM
Sbjct: 549 TFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEM 608

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           ++ NEV++  +++  ++  R +EAL++F  M ++ +    V+   VL  C+  G   E  
Sbjct: 609 TKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGL 668

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
            + +S +     +H +  H   +              +D+  + G +D A+     +P
Sbjct: 669 CYFKSMSN-EHGIHPRPDHYACV--------------VDILGRAGQLDRAKRFVEEMP 711


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/775 (31%), Positives = 396/775 (51%), Gaps = 84/775 (10%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           L HA  +  G   D FL N L+  YSK      A+                         
Sbjct: 32  LAHARAVVTGALPDLFLANLLLRAYSKLGRVRDAR------------------------- 66

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN--KMSNEGFVPTHITLASV 126
                 +LFD MP +N+VSW + IS   ++G EE A++++   + ++ G  P    LAS 
Sbjct: 67  ------RLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASA 120

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A      V  G++ HG+ ++IGLD N+YV  AL++LYAK G    A+ VF+ +   N 
Sbjct: 121 LRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNP 180

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+TA+++G ++  +   ALE+F  M    V  D   L+S +  C+  G       F + 
Sbjct: 181 VTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALG-------FLEG 233

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+Q H    ++  E D  + N+L+D+Y K   +  A  +F  +  R++VSW
Sbjct: 234 ---------GRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSW 284

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
             MIAGY Q     +A+ +  ++   G++PD     ++L +C     I  GR++      
Sbjct: 285 TTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIK 344

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F+++      S+NAM+  YS+  +   AI +
Sbjct: 345 ANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDV 404

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +M++  +KP   T   +L   ++   +E  KQ+H   +K+ + +D Y  S LI +YSK
Sbjct: 405 FSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSK 464

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
               E A+ VF+ +   D+V WN+MI GL+ N    EA   F Q++ + + P +F+F  +
Sbjct: 465 FSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVAL 524

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           ++  + L S F G+Q HAQI K G  +D  V +ALI+MY KCG I   R  F+   GK+ 
Sbjct: 525 VTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDV 584

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           + WN MI  YAQ+G  +EA+ +++ M  +GV+P+ +TFV +L+AC+H+GLVD G+  F+ 
Sbjct: 585 ICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDF 644

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M+  + +EP  +HY  +++  GR+G  H A+  I+ MP +    +W  LLS+C L  NV 
Sbjct: 645 MKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVE 704

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + + A E     DP +S P  L++NIY+S G W D + +R+ M    +VK+P YS
Sbjct: 705 IGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYS 759



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 153/597 (25%), Positives = 277/597 (46%), Gaps = 85/597 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   +R GL  + ++   LI LY+K     +A  +FD +P K+  +W A+++    
Sbjct: 133 GQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITG--- 189

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                     + ++ +  V                  AL ++ KM  +G  P    LAS 
Sbjct: 190 ----------YSQIGQGGV------------------ALELFGKMGLDGVRPDRFVLASA 221

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A +AL  +E GR+ HG   +I ++ +  V NAL+ LY KC     A  +F+ M   N 
Sbjct: 222 VSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNL 281

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T M++G  +     EA+ MF  + ++    D  + +S+L       CG  + ++   
Sbjct: 282 VSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASIL-----NSCGSLAAIW--- 333

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+QVH   IK   E+D ++ NSL+DMYAK   +  A  +F  L E   +S+
Sbjct: 334 --------QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISY 385

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VR 350
           N MI GY +      AI++  +M+ C  +P  +T +++L                   V+
Sbjct: 386 NAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVK 445

Query: 351 SGD-------------------IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
           SG                    ++  + +F+ M +  +  WNAM+   +Q+E  +EA+KL
Sbjct: 446 SGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKL 505

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F ++Q  G+ P+  T   +++  + +  +  G+Q HA  +K  +  D++V++ LI +Y+K
Sbjct: 506 FNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAK 565

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   +    +F      D++CWNSMI+  + +    EA   F+ M    + P   +F  V
Sbjct: 566 CGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGV 625

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG--SALIEMYCKCGDIYGARQFFDMM 566
           LS+CA      +G + H    K  Y  +      ++++ ++ + G ++ A++F + M
Sbjct: 626 LSACAHAGLVDEGLR-HFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERM 681



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 244/516 (47%), Gaps = 88/516 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+  H +  R  +  D  + N LI+LY KC+    A+ LFD M ++++           
Sbjct: 233 GGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNL----------- 281

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                               VSW  +I+  ++N  + +A++++ ++S EG+ P     AS
Sbjct: 282 --------------------VSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACAS 321

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  +  +L  +  GR+ H   IK  L+ + YV N+L+ +YAKC     A  VFE ++E +
Sbjct: 322 ILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDD 381

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++ AM+ G ++   +  A+++F  M   ++    ++  S+LGV +           +Q
Sbjct: 382 AISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSS-----------SQ 430

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S  + S+ +HG     L +K G   DL+  +SL+D+Y+K   ++ A+ +F+ +  R +V 
Sbjct: 431 SAIELSKQIHG-----LIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVI 485

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN MI G  Q  Q  +A++L  +++  G  P+E T + ++                    
Sbjct: 486 WNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQII 545

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G IK GR +F+S     V  WN+M+S+Y+Q    +EA+ 
Sbjct: 546 KAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALY 605

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID---NYVASGLIG 447
           +FR M   GV+P+  T   +LS+CA  G+++ G + H   +KT   I+    + AS ++ 
Sbjct: 606 VFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLR-HFDFMKTKYAIEPGTEHYAS-VVN 663

Query: 448 IYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSL 482
           ++ +  +   A+    R+P E     W S+++   L
Sbjct: 664 LFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHL 699


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/667 (35%), Positives = 370/667 (55%), Gaps = 51/667 (7%)

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G         SV KA T   D+  G++ HG+V+  G D + +VAN+L+ LYAKCG    A
Sbjct: 5   GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             +F+ + + + V++ A+ S    +D   EA+ +F  M+   +  +  SLSS++ VC   
Sbjct: 65  RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCT-- 122

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
             G+E             +V G+++H   IKLG+++D   +N+L+DMYAK G ++ A  +
Sbjct: 123 --GLED------------SVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSV 168

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  + +  +VSWN +IAG        +A+ELL+ M   G  P+  T  + L AC      
Sbjct: 169 FDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALR 228

Query: 355 KTGREM-----------------------------------FDSMPSPSVSSWNAMLSSY 379
           + GR++                                   F  MP   + +WNA++S +
Sbjct: 229 ELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGH 288

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           SQ+E  +EA  LF  M   G+  ++TTL+ +L S AA+      +Q+HA SLK+    DN
Sbjct: 289 SQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDN 348

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           YV + LI  Y KC   E A RVF   P +D+V + S++   + +    EA   + +M+  
Sbjct: 349 YVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDR 408

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
            + P  F  +++L++CA LS+  QG+QVH  I K G+++DIF G++L+ MY KCG I  A
Sbjct: 409 GIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDA 468

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
              F  +  +  V+W+ MI G AQ+GYG EA++L+K M+  GV P+ IT V++L AC+H+
Sbjct: 469 SCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHA 528

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           GLV      FNSM++  G+EP+ +HY CMID LGRAG    A  L+++MP + + ++W  
Sbjct: 529 GLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGA 588

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL + R+H N+ L ++AAE L  L+P+ S  + LLANIY+S+G WD +  VR LM +  +
Sbjct: 589 LLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKV 648

Query: 740 VKDPAYS 746
            K+P  S
Sbjct: 649 KKEPGMS 655



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 158/546 (28%), Positives = 262/546 (47%), Gaps = 82/546 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK +H  ++  G   D F+ N L+ LY+KC     A+                     
Sbjct: 27  VLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR--------------------- 65

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                      LFD +P+R+VVSWN L S  V + +  +A+S+++ M   G  P   +L+
Sbjct: 66  ----------SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLS 115

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+    T L D   GR+ HG +IK+G D + + ANAL+ +YAK G  + A  VF+E+++P
Sbjct: 116 SMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKP 175

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ A+++G    +    ALE+ R M +  +  +  +LSS L  CA            
Sbjct: 176 DIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACA------------ 223

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 +    G+Q+H   IK+   +D  L   L+DMY+K   MD A ++F  +PER ++
Sbjct: 224 ----GMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMI 279

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKS--------------------------------- 331
           +WN +I+G+ Q  +  +A  L   M +                                 
Sbjct: 280 AWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALS 339

Query: 332 --CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
              GFE D     +++    + G ++    +F+  P   +  + +++++Y+Q    +EA+
Sbjct: 340 LKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEAL 399

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +L+ EMQ RG+KPD    + +L++CA++   E GKQVH   LK     D +  + L+ +Y
Sbjct: 400 RLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMY 459

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC   E A   F RIP   IV W++MI GL+ +    EA   FKQM +  + P   +  
Sbjct: 460 AKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLV 519

Query: 510 TVLSSC 515
           +VL +C
Sbjct: 520 SVLCAC 525



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 196/398 (49%), Gaps = 52/398 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH+ +++  +  D+FL   LI++YSKCN+                            
Sbjct: 231 GRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSM--------------------------- 263

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            DD    +KL   MPER++++WN +IS   +N  +E+A S++  M  EG      TL++V
Sbjct: 264 -DDARLVFKL---MPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTV 319

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K+  AL      R+ H L +K G + + YV N+L+  Y KCG  + A  VFEE    + 
Sbjct: 320 LKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDL 379

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V FT++++  A+  +  EAL ++  M  + +  DS   SS+L  CA              
Sbjct: 380 VLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACA-------------- 425

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S    G+QVH   +K GF +D+   NSL++MYAK G ++ A   FS +P R +VSW
Sbjct: 426 --SLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSW 483

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           + MI G  Q     +A++L ++M   G  P+ +T +++L AC  +G +   +  F+SM  
Sbjct: 484 SAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKI 543

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                P    +  M+    ++   + A++L  +M F+ 
Sbjct: 544 LFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQA 581



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/513 (24%), Positives = 225/513 (43%), Gaps = 86/513 (16%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +H ++++ G   D F  N L+++Y+K      A  +FD++   DI SWNAI    
Sbjct: 128 VQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI---- 183

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                      I+  V +    +AL +  +M+  G  P   TL+
Sbjct: 184 ---------------------------IAGCVLHEYHHRALELLREMNKSGMCPNMFTLS 216

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S  KA   +   E GR+ H  +IK+ +  + ++   L+ +Y+KC     A  VF+ M E 
Sbjct: 217 SALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPER 276

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + + + A++SG ++ +   EA  +F LM  + +  +  +LS+VL                
Sbjct: 277 DMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVL---------------- 320

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           +S      N   +Q+H L++K GFE D ++ NSL+D Y K G ++ A  +F   P   +V
Sbjct: 321 KSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLV 380

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
            +  ++  Y Q  Q  +A+ L   M+  G +PD     ++L AC                
Sbjct: 381 LFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHI 440

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + G I+     F  +P   + SW+AM+   +Q    KEA+
Sbjct: 441 LKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEAL 500

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIG 447
           +LF++M   GV P+  TL  +L +C   G++   K  +  S+K    I+      + +I 
Sbjct: 501 QLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKH-YFNSMKILFGIEPMQEHYACMID 559

Query: 448 IYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           +  +  + E A  + +++P + + + W +++  
Sbjct: 560 LLGRAGKLEAAMELVNKMPFQANALVWGALLGA 592



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 148/289 (51%), Gaps = 4/289 (1%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M   G+K +      +L +C     L  GKQVH   + T    D +VA+ L+ +Y+KC  
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              A  +F  IP+  +V WN++ +    + +  EA   F  M  + + P +FS +++++ 
Sbjct: 61  FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C  L  S QGR++H  + K GY +D F  +AL++MY K G +  A   FD +   + V+W
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM-Q 633
           N +I G   + Y   A+ L ++M  SG+ P+  T  + L AC+   L ++G ++ +S+ +
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           +D G +  L     +ID   +     +A ++   MP + D + W  ++S
Sbjct: 241 MDMGSDSFLG--VGLIDMYSKCNSMDDARLVFKLMP-ERDMIAWNAVIS 286



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 146/312 (46%), Gaps = 47/312 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A+   + +HA  L++G   D ++ N LI+ Y KC +                       
Sbjct: 327 QANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGH----------------------- 363

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   +E A ++F+E P  ++V + +L++A  ++G  E+AL +Y +M + G  P   
Sbjct: 364 --------VEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSF 415

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
             +S+  A  +L   E G++ H  ++K G   +I+  N+L+++YAKCG  + A   F  +
Sbjct: 416 VCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRI 475

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
                V+++AM+ GLA+     EAL++F+ M++  V  + ++L SVL  C   G   E+ 
Sbjct: 476 PVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAK 535

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-E 300
            +  S               + I  G E        ++D+  + G +++A  + + +P +
Sbjct: 536 HYFNS---------------MKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQ 580

Query: 301 RSVVSWNVMIAG 312
            + + W  ++  
Sbjct: 581 ANALVWGALLGA 592


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 252/775 (32%), Positives = 393/775 (50%), Gaps = 81/775 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HAHI+++G   D  +   L+ +Y KC +   AQ +FDKM  ++             
Sbjct: 49  GKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERN------------- 95

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             V+SW  +I  L   G  ++A   + +M  EGF+P   T  S+
Sbjct: 96  ------------------VISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSI 137

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A+ +   +E  +  H   +  GL  ++ V NAL+ +YAK G    A  VF+ M E + 
Sbjct: 138 LNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDI 197

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++T M+ GLA+  R  EA  +F  M R     +  +  S+L   A    G    V    
Sbjct: 198 FSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWV---- 253

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                     ++VH    K GF +DL + N+L+ MYAK G +D A ++F  + +R V+SW
Sbjct: 254 ----------KEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISW 303

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
           N MI G  Q     +A  +  +M+  GF PD  T +++L   V                 
Sbjct: 304 NAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVE 363

Query: 350 ------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             R G I   + +FD +   +V++WNAM+   +Q +  +EA+ L
Sbjct: 364 VGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSL 423

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +M+  G  PD TT   ILS+      LE  K+VH+ ++  A  +D  V + L+ +Y+K
Sbjct: 424 FLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAID-AGLVDLRVGNALVHMYAK 482

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     A++VF  + E ++  W  MI+GL+ +    EAF  F QM +  + P   ++ ++
Sbjct: 483 CGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSI 542

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS+CA   +    ++VH+     G V+D+ VG+AL+ MY KCG +  AR+ FD M  ++ 
Sbjct: 543 LSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDV 602

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
            +W  MI G AQ+G G +A+ L+  M   G KP+  +FVA+L+ACSH+GLVD G   F S
Sbjct: 603 YSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLS 662

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           +  D+G+EP ++HYTCM+D LGRAG   EA+  I  MP +     W  LL +C  + N+ 
Sbjct: 663 LTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLE 722

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +A+ AA+E  +L PK+++ Y LL+NIY++ G W+    VR +M    I K+P  S
Sbjct: 723 MAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRS 777



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 187/635 (29%), Positives = 304/635 (47%), Gaps = 56/635 (8%)

Query: 91  LISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG 150
           +I      G  E A+ VY++M  EG  P  IT  S+ KA  + + ++ G++ H  +I+ G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
              ++ V  AL+++Y KCG    A  +F++M E N +++T M+ GLA   R  EA   F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            M R+    +S +  S+L   A  G             ++ + VH   V+      G   
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGA-----------LEWVKEVHSHAVNA-----GLAL 164

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           DL + N+L+ MYAK+G +D A V+F  + ER + SW VMI G  Q  +  +A  L  +M+
Sbjct: 165 DLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQME 224

Query: 331 SCGFEPDEVTSINMLVAC-------------------------------------VRSGD 353
             G  P+  T +++L A                                       + G 
Sbjct: 225 RGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGS 284

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           I   R +FD M    V SWNAM+   +Q+    EA  +F +MQ  G  PD TT   +L++
Sbjct: 285 IDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNT 344

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
             + G  E  K+VH  +++     D  V S  + +Y +C   + A+ +F ++   ++  W
Sbjct: 345 HVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTW 404

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           N+MI G++      EA   F QMR+   +P   +F  +LS+     +    ++VH+    
Sbjct: 405 NAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAID 464

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G V D+ VG+AL+ MY KCG+   A+Q FD M  +N  TW  MI G AQ+G G EA  L
Sbjct: 465 AGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSL 523

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +  M+  G+ PD  T+V+IL+AC+ +G ++   E+ +S  ++ G+   L     ++    
Sbjct: 524 FLQMLREGIVPDATTYVSILSACASTGALEWVKEV-HSHAVNAGLVSDLRVGNALVHMYA 582

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           + G   +A  + D+M  + D   W V++     H 
Sbjct: 583 KCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQHG 616



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 182/374 (48%), Gaps = 11/374 (2%)

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+  Y++    ++A+K++ +M+  G +P+  T   IL +C +   L+ GK++HA  +++ 
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V + L+ +Y KC   + A+ +F ++ E +++ W  MI GL+      EAF  F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           QM++    P  +++ ++L++ A   +    ++VH+     G   D+ VG+AL+ MY K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL- 613
            I  AR  FD M  ++  +W  MI G AQ+G G EA  L+  M   G  P+  T+++IL 
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 614 -TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
            +A + +G ++   E+        G    L     +I    + G   +A ++ D M C  
Sbjct: 241 ASAITSTGALEWVKEVHKHAG-KAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM-CDR 298

Query: 673 DPVIWEVLLSSCRL----HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLR 728
           D + W  ++         H    +  +  +E F  D   S  Y  L N + S G W+ ++
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPD---STTYLSLLNTHVSTGAWEWVK 355

Query: 729 AVRELMSENCIVKD 742
            V +   E  +V D
Sbjct: 356 EVHKHAVEVGLVSD 369


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 252/775 (32%), Positives = 394/775 (50%), Gaps = 87/775 (11%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA     G  DD FL N L+  YS       A+HLF                       
Sbjct: 40  IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLF----------------------- 76

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY---NKMSNEGFVPTHITLASV 126
                   D MP RN+VSW ++IS   ++G ++ A+S++    K S E  VP    LASV
Sbjct: 77  --------DRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCE--VPNEFLLASV 126

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A T    V  G + HG+ +K+ LD N+YV  AL++LYAK G    A+ VF  +     
Sbjct: 127 LRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTP 186

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+  +++G A+      ALE+F  M  + V  D   L+S +  C+  G       F + 
Sbjct: 187 VTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALG-------FLEG 239

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+Q+H    +   E D  + N L+D+Y K   + +A  +F  +  R++VSW
Sbjct: 240 ---------GRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSW 290

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
             MI+GY Q   + +AI +   M   G++PD     ++L +C     I  GR++      
Sbjct: 291 TTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIK 350

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        FD++      S+NAM+  YS++ +  EA+ +
Sbjct: 351 ADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNI 410

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+ M+F  ++P   T   +L   ++   +E  KQ+H   +K+ + +D Y AS LI +YSK
Sbjct: 411 FQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSK 470

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     A+ VF+ +   D+V WNSMI G + N    EA   F Q+  + M P +F+F  +
Sbjct: 471 CSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVAL 530

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           ++  + L+S F G+Q HA I K G  ND  V +ALI+MY KCG I   R  F+   G++ 
Sbjct: 531 VTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDV 590

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           + WN MI  YAQ+G+ +EA+++++ M  + V+P+ +TFV +L+AC+H+G V  G+  FNS
Sbjct: 591 ICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNS 650

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M+ ++ +EP ++HY  +++  GR+G  H A+  I+ MP K    +W  LLS+C L  N  
Sbjct: 651 MKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAE 710

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + + AAE     DP +S PY LL+NIY+S G W D+  +R+ M  +  VK+   S
Sbjct: 711 IGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCS 765



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 243/515 (47%), Gaps = 86/515 (16%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ +H +  R+    DT + N LI+LY KC+   +A+ LFD M ++++           
Sbjct: 239 GGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNL----------- 287

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                               VSW  +IS  ++N    +A++++  M+  G+ P      S
Sbjct: 288 --------------------VSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTS 327

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  +  +L  +  GR+ H  VIK  L+ + YV NAL+ +YAKC     A  VF+ ++E +
Sbjct: 328 ILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDD 387

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++ AM+ G +K   + EA+ +F+ M   ++    ++  S+LGV +           +Q
Sbjct: 388 AISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSS-----------SQ 436

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
              + S+ +HG     L IK G   DL+ +++L+D+Y+K   ++ A+ +F+ L  + +V 
Sbjct: 437 LAIELSKQIHG-----LIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVI 491

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN MI G+ Q  Q  +AI+L  ++   G  P+E T + ++                    
Sbjct: 492 WNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWII 551

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G IK GR +F+S     V  WN+M+++Y+Q  + +EA++
Sbjct: 552 KAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQ 611

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGI 448
           +FR M    V+P+  T   +LS+CA  G +  G   H  S+K+   I+  +   + ++ +
Sbjct: 612 VFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLN-HFNSMKSNYDIEPGIEHYASVVNL 670

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSL 482
           + +  +   A+    R+P +     W S+++   L
Sbjct: 671 FGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHL 705



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 128/281 (45%), Gaps = 6/281 (2%)

Query: 406 TLAIILSSCAAMG---ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           +LA +L SC   G   +      +HA +       D ++ + L+  YS   R   A  +F
Sbjct: 17  SLARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLF 76

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM-YPTQFSFATVLSSCAKLSSS 521
            R+P  ++V W S+I+  + +  D  A   F   ++     P +F  A+VL +C +  + 
Sbjct: 77  DRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAV 136

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G QVH    K     +++VG+ALI +Y K G +  A   F  +  +  VTWN +I GY
Sbjct: 137 SLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGY 196

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           AQ G G  A+ L+  M   GV+PD     + ++ACS  G ++ G +I +        E  
Sbjct: 197 AQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQI-HGYAYRSATETD 255

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
                 +ID   +      A  L D M  + + V W  ++S
Sbjct: 256 TSVINVLIDLYCKCSRLSAARKLFDCMEYR-NLVSWTTMIS 295


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/729 (33%), Positives = 384/729 (52%), Gaps = 60/729 (8%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+YS N ++           A ++F+E+  R+ VSW  ++S   +NGL E+AL +Y +M 
Sbjct: 85  DLYSKNGLVLP---------ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMH 135

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             G VPT   L+SV  + T       GR  H    K G    I+V NA+++LY +CG  +
Sbjct: 136 RAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFR 195

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF +M   + VTF  ++SG A+      ALE+F  M    +S D V++SS+L  CA
Sbjct: 196 LAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACA 255

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G     D+             G Q+H    K G  +D  +  SLLD+Y K GD+++A 
Sbjct: 256 SLG-----DL-----------QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---- 348
           VIF++    +VV WN+M+  +GQ     K+ EL  +M++ G  P++ T   +L  C    
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359

Query: 349 -------VRSGDIKTG------------------------REMFDSMPSPSVSSWNAMLS 377
                  + S  +KTG                        R + + +    V SW +M++
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y Q E  K+A+  F+EMQ  G+ PD   LA  +S CA +  +  G Q+HA    +    
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D  + + L+ +Y++C R   A   F  +   D +  N +++G + + L  EA   F +M 
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMD 539

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           Q+ +    F+F + LS+ A L+   QG+Q+HA++ K G+  +  VG+ALI +Y KCG   
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A+  F  M  +N V+WN +I   +Q+G G EA+ L+  M   G+KP+D+TF+ +L ACS
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACS 659

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           H GLV+ G+  F SM  ++G+ P  DHY C+ID  GRAG    A+  I+EMP   D ++W
Sbjct: 660 HVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVW 719

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
             LLS+C++H N+ + + AA+ L  L+P +SA Y LL+N Y+   +W +   VR++M + 
Sbjct: 720 RTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDR 779

Query: 738 CIVKDPAYS 746
            + K+P  S
Sbjct: 780 GVRKEPGRS 788



 Score =  291 bits (745), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 193/653 (29%), Positives = 325/653 (49%), Gaps = 70/653 (10%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE--GFVPTHITLASVFKASTALLDVE 137
           M  R   S    ++  + +    K LS++   + +  G  P  +  A   +A        
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRG----- 53

Query: 138 HGRR------CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
           +GRR       H   +  GL K   V N L+ LY+K G    A  VFEE+S  + V++ A
Sbjct: 54  NGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVA 113

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           M+SG A+     EAL ++R M R  V      LSSVL  C +      +++FAQ      
Sbjct: 114 MLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK------AELFAQ------ 161

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G+ +H    K GF +++ + N+++ +Y + G    AE +F ++P R  V++N +I+
Sbjct: 162 ----GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLIS 217

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------------- 348
           G+ Q      A+E+ + M+  G  PD VT  ++L AC                       
Sbjct: 218 GHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISS 277

Query: 349 ------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                       V+ GD++T   +F+S    +V  WN ML ++ Q  +  ++ +LF +MQ
Sbjct: 278 DYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQ 337

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
             G++P++ T   IL +C     ++ G+Q+H+ S+KT    D YV+  LI +YSK    E
Sbjct: 338 AAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLE 397

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A RV   + E D+V W SMIAG   +    +A   FK+M++  ++P     A+ +S CA
Sbjct: 398 KARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
            +++  QG Q+HA+I   GY  D+ + +AL+ +Y +CG I  A   F+ M  K+ +T N 
Sbjct: 458 GINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNG 517

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF-NSMQLD 635
           ++ G+AQ+G  +EA++++  M  SGVK +  TFV+ L+A ++   +  G +I    ++  
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           H  E  + +   +I   G+ G F +A+M   EM  +++ V W  +++SC  H 
Sbjct: 578 HSFETEVGN--ALISLYGKCGSFEDAKMEFSEMSERNE-VSWNTIITSCSQHG 627



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 156/613 (25%), Positives = 278/613 (45%), Gaps = 92/613 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS--AQ 64
           G+L+HA   ++G   + F+ N +I LY +C +   A+ +F  MPH+D  ++N ++S  AQ
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ 221

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
           C                                 G  E AL ++ +M   G  P  +T++
Sbjct: 222 C---------------------------------GHGEHALEIFEEMQFSGLSPDCVTIS 248

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  A  +L D++ G + H  + K G+  +  +  +LL LY KCG  + A+ +F      
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V +  M+    + + + ++ E+F  M    +  +  +   +L  C    C  E D+  
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCT---CTREIDL-- 363

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+Q+H L++K GFE+D+++S  L+DMY+K G ++ A  +   L E+ VV
Sbjct: 364 -----------GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           SW  MIAGY Q      A+   + M+ CG  PD +   + +  C                
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               R G I+     F+ M      + N ++S ++QS  H+EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEAL 532

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           K+F  M   GVK +  T    LS+ A +  ++ GKQ+HA  +KT    +  V + LI +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            KC   E A+  F  + E + V WN++I   S +   +EA   F QM++  + P   +F 
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFI 652

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVN---DIFVGSALIEMYCKCGDIYGARQFFDMM 566
            VL++C+ +    +G      +  +  +    D +  + +I+++ + G +  A++F + M
Sbjct: 653 GVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHY--ACVIDIFGRAGQLDRAKKFIEEM 710

Query: 567 H-GKNTVTWNEMI 578
               + + W  ++
Sbjct: 711 PIAADAMVWRTLL 723



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 138/645 (21%), Positives = 274/645 (42%), Gaps = 100/645 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH+++ + G+  D  +   L++LY KC                              
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCG----------------------------- 293

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+E A  +F+     NVV WN ++ A  +     K+  ++ +M   G  P   T   +
Sbjct: 294 --DVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCI 351

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +  T   +++ G + H L +K G + ++YV+  L+ +Y+K GW + A  V E + E + 
Sbjct: 352 LRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDV 411

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T+M++G  + +   +AL  F+ M +  +  D++ L+S +  CA    G+ +      
Sbjct: 412 VSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA----GINA------ 461

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q+H      G+  D+ + N+L+++YA+ G +  A   F  +  +  ++ 
Sbjct: 462 ------MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITG 515

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N +++G+ Q     +A+++  RM   G + +  T ++ L A     +IK G+++      
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK 575

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F  M   +  SWN +++S SQ     EA+ L
Sbjct: 576 TGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDL 635

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA---SLKTASHIDNYVASGLIGI 448
           F +M+  G+KP+  T   +L++C+ +G++E G     +           D+Y    +I I
Sbjct: 636 FDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC--VIDI 693

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           + +  + + A++    +P   D + W ++++   ++  +IE   F  +    E+ P   +
Sbjct: 694 FGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHK-NIEVGEFAAK-HLLELEPHDSA 751

Query: 508 FATVLSSCAKLSSSFQGR-QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
              +LS+   ++  +  R QV   +   G   +   G + IE+     ++  A    D +
Sbjct: 752 SYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKE--PGRSWIEVK----NVVHAFFVGDRL 805

Query: 567 HGKNTVTWNEMI---HGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           H      +N +       A+ GY  E   L+ D    G  P D+ 
Sbjct: 806 HPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLV 850


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 260/782 (33%), Positives = 397/782 (50%), Gaps = 90/782 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A + G  LHA +L++G        N LI  YSKC     A+                  
Sbjct: 18  QALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCAR------------------ 57

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                        + FDE+P+   VSW++L++A   NGL   A+  ++ M  EG      
Sbjct: 58  -------------RFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEF 104

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            L  V K    + D   G + H + +  G   +++VANAL+++Y   G+   A  VF E 
Sbjct: 105 ALPVVLK---CVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEA 161

Query: 182 -SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            SE N V++  +MS   K D+  +A+++F  M+   +       S V+  C         
Sbjct: 162 DSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTG------- 214

Query: 241 DVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                     SRN+  G+QVH + +++G++ D+  +N+L+DMY K G +D A VIF  +P
Sbjct: 215 ----------SRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           +  VVSWN +I+G        +AIELL +MK  G  P+  T  ++L AC  +G    GR+
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQ 324

Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
           +                                   FD M    +   NA++S  S    
Sbjct: 325 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGR 384

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
           H EA+ LF E++  G+  +RTTLA +L S A++    + +QVHA ++K     D +V +G
Sbjct: 385 HDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNG 444

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI  Y KC     A RVF      DI+   SMI  LS       A   F +M +  + P 
Sbjct: 445 LIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPD 504

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            F  +++L++CA LS+  QG+QVHA + K  +++D F G+AL+  Y KCG I  A   F 
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 564

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            +  +  V+W+ MI G AQ+G+G  A+ L+  M+  G+ P+ IT  ++L AC+H+GLVD 
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
               FNSM+   G++   +HY+CMID LGRAG   +A  L++ MP + +  IW  LL + 
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGAS 684

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           R+H +  L K AAE+LF L+P+ S  + LLAN Y+S G W+++  VR+LM ++ I K+PA
Sbjct: 685 RVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPA 744

Query: 745 YS 746
            S
Sbjct: 745 MS 746



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 158/636 (24%), Positives = 290/636 (45%), Gaps = 68/636 (10%)

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M + G +   +T    + A+ ALL    G   H  ++K G   +    N L+S Y+KC  
Sbjct: 1   MRSAGTISQQLTR---YAAAQALLP---GAHLHASLLKSGSLASFR--NHLISFYSKCRR 52

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              A   F+E+ +P  V+++++++  +       A++ F  M  + V  +  +L  VL  
Sbjct: 53  PCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK- 111

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
                C  ++ +             G QVH + +  GF +D+ ++N+L+ MY   G MD 
Sbjct: 112 -----CVPDARL-------------GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDD 153

Query: 291 AEVIFSNL-PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
           A  +F+    ER+ VSWN +++ Y +  Q   AI++   M   G +P E     ++ AC 
Sbjct: 154 ARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACT 213

Query: 350 RSGDIKTGRE-----------------------------------MFDSMPSPSVSSWNA 374
            S +I+ GR+                                   +F+ MP   V SWNA
Sbjct: 214 GSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNA 273

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           ++S    + +   AI+L  +M++ G+ P+  TL+ IL +C+  G  + G+Q+H   +K  
Sbjct: 274 LISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKAN 333

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
           +  D+Y+  GL+ +Y+K    + A +VF  +   D++  N++I+G S      EA   F 
Sbjct: 334 ADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFY 393

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           ++R+  +   + + A VL S A L ++   RQVHA   K G++ D  V + LI+ Y KC 
Sbjct: 394 ELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCS 453

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
            +  A + F+     + +    MI   +Q  +G+ A++L+ +M+  G++PD     ++L 
Sbjct: 454 CLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLN 513

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           AC+     + G ++   +     +         ++    + G   +AE+    +P +   
Sbjct: 514 ACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLP-ERGV 571

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
           V W  ++     H +    KRA E   R+  +   P
Sbjct: 572 VSWSAMIGGLAQHGH---GKRALELFGRMVDEGINP 604


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/781 (31%), Positives = 416/781 (53%), Gaps = 89/781 (11%)

Query: 7   GKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ +H  I  +  F +D  L  RL+ +YS C++ + +  +F+    K+++ WNA      
Sbjct: 112 GRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNA------ 165

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLA 124
                                    L+S  +RN L   A+ V+ +M S   FVP + TL 
Sbjct: 166 -------------------------LLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLP 200

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            V KA   + DV  G   HG  +K  +  +++V NAL+++Y K G+ + AV VF++M + 
Sbjct: 201 CVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQR 260

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIR--KAVSIDSVSLSSVLGVCAREGCGVESDV 242
           N V++ ++M    +     E+  +F+ ++   + +  D  ++ +V+ +CAR+G   E  +
Sbjct: 261 NLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQG---EVRL 317

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G   H L +KLG   +L +++SLLDMY+K G +  A V+F +  E++
Sbjct: 318 -------------GMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKN 363

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMK-SCGFEPDEVTSINMLVAC------------- 348
           V+SWN MI GY +      A ELL++M+     + +EVT +N+L  C             
Sbjct: 364 VISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIH 423

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G +     +F  M S  VSSWNA++  + Q+   
Sbjct: 424 GYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFP 483

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++A+ L+  M+  G++PD  T+A +LS+CA +  L  GK++H + L+    +D ++   L
Sbjct: 484 RKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISL 543

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y +C +  LA+  F  + E ++VCWN+MI G S N    +A   F QM  ++++P +
Sbjct: 544 VSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDE 603

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            S    L +C+++S+   G+++H    K       FV  +LI+MY KCG +  ++  FD 
Sbjct: 604 ISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDR 663

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +H K  VTWN +I GY  +G+G +A+ L+K M  +G +PD +TF+A+LTAC+H+GLV  G
Sbjct: 664 VHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEG 723

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
           +E    MQ   G++P L+HY C++D LGRAG  +EA  L++E+P K D  IW  LLSSCR
Sbjct: 724 LEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCR 783

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
            + ++ + ++ A +L  L P  +  Y L++N Y+ LG+WD++R +R+ M E  + KD   
Sbjct: 784 NYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGC 843

Query: 746 S 746
           S
Sbjct: 844 S 844



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 140/271 (51%), Gaps = 8/271 (2%)

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQRNELA 458
           KP +  + ++L  C     +E G+++H   + T+ H  N V   + L+ +YS C     +
Sbjct: 91  KP-KQLIGLLLQLCGEYKNIEIGRKIHNF-ISTSPHFQNDVVLITRLVTMYSICDSPYDS 148

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEA-FMFFKQMRQNEMYPTQFSFATVLSSCAK 517
             VF+     ++  WN++++G   NSL  +A F+F + +   E  P  F+   V+ +C  
Sbjct: 149 CLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVG 208

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           +     G  VH    K   ++D+FVG+ALI MY K G +  A + FD M  +N V+WN +
Sbjct: 209 VYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSV 268

Query: 578 IHGYAQNGYGDEAVRLYKDMIAS--GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
           ++   +NG  +E+  L+K ++    G+ PD  T V ++  C+  G V +G+ +F+ + L 
Sbjct: 269 MYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALK 327

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
            G+   L   + ++D   + G+  EA +L D
Sbjct: 328 LGLCGELKVNSSLLDMYSKCGYLCEARVLFD 358



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 126/301 (41%), Gaps = 48/301 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+   GK +H  +LRNG   D F+C  L+ LY +C     A+  FD M  K++       
Sbjct: 516 KSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNL------- 568

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                   V WN +I+   +N     AL ++++M +    P  I
Sbjct: 569 ------------------------VCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEI 604

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           ++     A + +  +  G+  H   +K  L ++ +V  +L+ +YAKCG  + +  +F+ +
Sbjct: 605 SIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRV 664

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES- 240
               EVT+  +++G        +A+E+F+ M       DSV+  ++L  C   G   E  
Sbjct: 665 HLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGL 724

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           +   Q  + F                G +  L     ++DM  + G ++ A  + + LP+
Sbjct: 725 EYLGQMQSLF----------------GIKPKLEHYACVVDMLGRAGRLNEALELVNELPD 768

Query: 301 R 301
           +
Sbjct: 769 K 769


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 260/782 (33%), Positives = 398/782 (50%), Gaps = 90/782 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A + G  LHA +L++G        N LI  YSKC     A+                  
Sbjct: 18  QALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCAR------------------ 57

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                        ++FDE+P+   VSW++L++A   NGL   A+  ++ M  EG      
Sbjct: 58  -------------RVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEF 104

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            L  V K    + D   G + H + +  G   +++VANAL+++Y   G+   A  VF E 
Sbjct: 105 ALPVVLK---CVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEA 161

Query: 182 -SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            SE N V++  +MS   K D+  +A+++F  M+   +       S V+  C         
Sbjct: 162 DSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTG------- 214

Query: 241 DVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                     SRN+  G+QVH + +++G++ D+  +N+L+DMY K G +D A VIF  +P
Sbjct: 215 ----------SRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           +  VVSWN +I+G        +AIELL +MK  G  P+  T  ++L AC  +G    GR+
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQ 324

Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
           +                                   FD M    +   NA++S  S    
Sbjct: 325 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGR 384

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
           H EA+ LF E++  G+  +RTTLA +L S A++    + +QVHA ++K     D +V +G
Sbjct: 385 HDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNG 444

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI  Y KC     A RVF      DI+   SMI  LS       A   F +M +  + P 
Sbjct: 445 LIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPD 504

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            F  +++L++CA LS+  QG+QVHA + K  +++D F G+AL+  Y KCG I  A   F 
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 564

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            +  +  V+W+ MI G AQ+G+G  A+ L+  M+  G+ P+ IT  ++L AC+H+GLVD 
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
               FNSM+   G++   +HY+CMID LGRAG   +A  L++ MP + +  IW  LL + 
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGAS 684

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           R+H +  L K AAE+LF L+P+ S  + LLAN Y+S G W+++  VR+LM ++ I K+PA
Sbjct: 685 RVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPA 744

Query: 745 YS 746
            S
Sbjct: 745 MS 746



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 159/636 (25%), Positives = 291/636 (45%), Gaps = 68/636 (10%)

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M + G +   +T    + A+ ALL    G   H  ++K G   +    N L+S Y+KC  
Sbjct: 1   MRSAGTISQQLTR---YAAAQALLP---GAHLHASLLKSGSLASFR--NHLISFYSKCRR 52

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              A  VF+E+ +P  V+++++++  +       A++ F  M  + V  +  +L  VL  
Sbjct: 53  PCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK- 111

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
                C  ++ +             G QVH + +  GF +D+ ++N+L+ MY   G MD 
Sbjct: 112 -----CVPDARL-------------GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDD 153

Query: 291 AEVIFSNL-PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
           A  +F+    ER+ VSWN +++ Y +  Q   AI++   M   G +P E     ++ AC 
Sbjct: 154 ARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACT 213

Query: 350 RSGDIKTGRE-----------------------------------MFDSMPSPSVSSWNA 374
            S +I+ GR+                                   +F+ MP   V SWNA
Sbjct: 214 GSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNA 273

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           ++S    + +   AI+L  +M++ G+ P+  TL+ IL +C+  G  + G+Q+H   +K  
Sbjct: 274 LISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKAN 333

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
           +  D+Y+  GL+ +Y+K    + A +VF  +   D++  N++I+G S      EA   F 
Sbjct: 334 ADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFY 393

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           ++R+  +   + + A VL S A L ++   RQVHA   K G++ D  V + LI+ Y KC 
Sbjct: 394 ELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCS 453

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
            +  A + F+     + +    MI   +Q  +G+ A++L+ +M+  G++PD     ++L 
Sbjct: 454 CLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLN 513

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           AC+     + G ++   +     +         ++    + G   +AE+    +P +   
Sbjct: 514 ACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLP-ERGV 571

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
           V W  ++     H +    KRA E   R+  +   P
Sbjct: 572 VSWSAMIGGLAQHGH---GKRALELFGRMVDEGINP 604


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/762 (30%), Positives = 410/762 (53%), Gaps = 84/762 (11%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           +++   A++    +   ++ A    DE+   +VV+WN +I+  V+    E+A  ++++M 
Sbjct: 209 NLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRML 268

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             G  P + T AS  +   AL   + G++ H  +I  G   + +V NAL+ +YAKC   +
Sbjct: 269 KIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEE 328

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
             + VF+EM E N+VT+ +++S  A+     +AL +F  M       +  +L S+L   A
Sbjct: 329 SCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASA 388

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                        +D    R +HG  V  L       +D+ L ++L+DMY+K G ++ A 
Sbjct: 389 -----------GLADIGKGRELHGHLVRNL-----LNSDIILGSALVDMYSKCGMVEEAH 432

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSINMLVACVRS 351
            +F +L ER+ VS+N ++AGY Q+ ++ +A+EL   M+S  G +PD+ T   +L  C   
Sbjct: 433 QVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQ 492

Query: 352 GDIKTGR-----------------------------------EMFDSMPSPSVSSWNAML 376
            +   GR                                   E+F+ M   +  SWN+M+
Sbjct: 493 RNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMI 552

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
             Y Q+   +EA++LF++MQ  G+KPD  +L+ +LSSC ++   + G+++H   ++    
Sbjct: 553 EGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTME 612

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC------------------------ 472
            +  +   L+ +Y+KC   + A +V+ +  + D++                         
Sbjct: 613 EEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQM 672

Query: 473 -------WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
                  WNS++AG +   L  E+F  F +M ++++     +  T+++ C+ L +   G 
Sbjct: 673 EQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGD 732

Query: 526 QVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           Q+H+ I K G+VN  + + +AL++MY KCG I  AR  FD M+GKN V+WN MI GY+++
Sbjct: 733 QLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKH 792

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G   EA+ LY++M   G+ P+++TF+AIL+ACSH+GLV+ G+ IF SMQ D+ +E   +H
Sbjct: 793 GCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEH 852

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           YTCM+D LGRAG   +A+  +++MP + +   W  LL +CR+H ++ + + AA+ LF LD
Sbjct: 853 YTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELD 912

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           P+N  PY +++NIY++ GRW ++  +R++M    + KDP  S
Sbjct: 913 PQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVS 954



 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 215/765 (28%), Positives = 351/765 (45%), Gaps = 120/765 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++ NG   D +L  +++ LY++                           + C 
Sbjct: 90  GKSIHTQMISNGYNPDAYLMTKILMLYAR---------------------------SGCL 122

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            DDL +A KLF+EMPERN+ +WN +I A  R     + L +Y +M   G      T  SV
Sbjct: 123 -DDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSV 181

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA  A+ D+   R+    V+K GL+ N++V  AL+  YA+ GW   AV   +E+   + 
Sbjct: 182 IKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSV 241

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC----AREGCGVESDV 242
           VT+ A+++G  K     EA  +F  M++  V  D+ + +S L VC    +R+G       
Sbjct: 242 VTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG------- 294

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+QVH   I  GF+ D  + N+L+DMYAK  D +S   +F  + ER+
Sbjct: 295 -------------GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERN 341

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-- 360
            V+WN +I+   Q      A+ L  RM+  G++ +     ++L+A     DI  GRE+  
Sbjct: 342 QVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHG 401

Query: 361 ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                            F S+   +  S+NA+L+ Y Q    +E
Sbjct: 402 HLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEE 461

Query: 388 AIKLFREMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           A++L+ +MQ   G++PD+ T   +L+ CA       G+Q+HA  ++     +  V + L+
Sbjct: 462 ALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELV 521

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +YS+C R   A+ +F+R+ E +   WNSMI G   N    EA   FKQM+ N + P  F
Sbjct: 522 HMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCF 581

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD------IY--- 557
           S +++LSSC  LS S +GR++H  I ++    +  +   L++MY KCG       +Y   
Sbjct: 582 SLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQT 641

Query: 558 ----------------------GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
                                  A+  FD M  +NT  WN ++ GYA  G   E+   + 
Sbjct: 642 IKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFL 701

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
           +M+ S ++ D +T V I+  CS    ++ G ++ + +     V   +   T ++D   + 
Sbjct: 702 EMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKC 761

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
           G   +A  + D M  K + V W  ++S    H   + A    EE+
Sbjct: 762 GAITKARTVFDNMNGK-NIVSWNAMISGYSKHGCSKEALILYEEM 805



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 161/666 (24%), Positives = 311/666 (46%), Gaps = 127/666 (19%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           ++   GK +H+ ++  G   DTF+ N LI++Y+KC++  S   +FD+M  ++  +WN+I+
Sbjct: 290 RSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSII 349

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           SA+ +       +  F++                        AL ++ +M   G+     
Sbjct: 350 SAEAQ-------FGHFND------------------------ALVLFLRMQESGYKSNRF 378

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            L S+  AS  L D+  GR  HG +++  L+ +I + +AL+ +Y+KCG  + A  VF  +
Sbjct: 379 NLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSL 438

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVES 240
            E NEV++ A+++G  +  +  EALE++  M  +  +  D  + +++L +CA +      
Sbjct: 439 LERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQ------ 492

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
               ++DN+      G+Q+H   I+     ++ +   L+ MY++ G ++ A+ IF+ + E
Sbjct: 493 ----RNDNQ------GRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAE 542

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           R+  SWN MI GY Q  ++ +A+ L ++M+  G +PD  +  +ML +CV   D + GRE+
Sbjct: 543 RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGREL 602

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              +D      V   N M+S++  S   
Sbjct: 603 HNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRA 662

Query: 386 KEAIKLFREMQFRG-------------------------------VKPDRTTLAIILSSC 414
            +A  LF +M+ R                                ++ D  T+  I++ C
Sbjct: 663 NDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLC 722

Query: 415 AAMGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           +++  LE G Q+H+  +K    +    + + L+ +YSKC     A  VF  +   +IV W
Sbjct: 723 SSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSW 782

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           N+MI+G S +    EA + +++M +  MYP + +F  +LS+C+      +G ++   +++
Sbjct: 783 NAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQE 842

Query: 534 DGYVNDIFVG-SALIEMYCKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAV 591
           D  +       + ++++  + G +  A++F + M  +  V TW  ++           A 
Sbjct: 843 DYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLG----------AC 892

Query: 592 RLYKDM 597
           R++KDM
Sbjct: 893 RVHKDM 898



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 240/504 (47%), Gaps = 63/504 (12%)

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV----VEALEMFRLMIRKAVSIDSVS 223
           C +++H    F  +  PN  +F+A       T ++     ++ +   +  + A  ++ + 
Sbjct: 18  CHYSRH----FFLLPNPNSKSFSAHFGHTTTTIKLKFNGPDSPKPTSIHTKPASDVNPLP 73

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
            SS++  C                N F R   G+ +H   I  G+  D +L   +L +YA
Sbjct: 74  YSSLIQDCI-------------DSNSFQR---GKSIHTQMISNGYNPDAYLMTKILMLYA 117

Query: 284 KNGDMDS---AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           ++G +D    A  +F  +PER++ +WN MI  Y +     + + L  RM+  G   D+ T
Sbjct: 118 RSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFT 177

Query: 341 SINMLVACVRSGDIKTGREM-----------------------------------FDSMP 365
             +++ AC+   D+   R++                                    D + 
Sbjct: 178 FPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIE 237

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
             SV +WNA+++ Y +  + +EA  +F  M   GV PD  T A  L  C A+   + GKQ
Sbjct: 238 GTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQ 297

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           VH+  +      D +V + LI +Y+KC   E   +VF  + E + V WNS+I+  +    
Sbjct: 298 VHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGH 357

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             +A + F +M+++     +F+  ++L + A L+   +GR++H  + ++   +DI +GSA
Sbjct: 358 FNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSA 417

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS-GVKP 604
           L++MY KCG +  A Q F  +  +N V++N ++ GY Q G  +EA+ LY DM +  G++P
Sbjct: 418 LVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQP 477

Query: 605 DDITFVAILTACSHSGLVDVGVEI 628
           D  TF  +LT C++    + G +I
Sbjct: 478 DQFTFTTLLTLCANQRNDNQGRQI 501



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 7/179 (3%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG---DIYGARQFFD 564
           +++++  C   +S  +G+ +H Q+  +GY  D ++ + ++ +Y + G   D+  AR+ F+
Sbjct: 74  YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            M  +N   WN MI  YA+     E +RLY  M  SG   D  TF +++ AC    + D+
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC--IAMEDM 191

Query: 625 -GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            GV    S  +  G+   L     ++D   R G   +A   +DE+      V W  +++
Sbjct: 192 GGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIE-GTSVVTWNAVIA 249


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 1047

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 252/773 (32%), Positives = 412/773 (53%), Gaps = 84/773 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA  + +G  +  F+CN LI+LY K                      N  L++      
Sbjct: 192 IHARTITHGYENSLFVCNPLIDLYFK----------------------NGFLNS------ 223

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
              A K+FD + +R+ VSW  ++S L ++G EE+A+ ++ +M   G  PT    +SV  A
Sbjct: 224 ---AKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSA 280

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            T +   + G + HGLV+K G     YV NAL++LY++ G    A  VF  M + +EV++
Sbjct: 281 CTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSY 340

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            +++SGL++     +ALE+F+ M    +  D V+++S+L  C+  G  +           
Sbjct: 341 NSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLV---------- 390

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+Q H   IK G  +D+ L  +LLD+Y K  D+ +A   F +    +VV WNVM
Sbjct: 391 ------GKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVM 444

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--VRSGDI---------KTGR 358
           +  YG      ++ ++  +M+  G EP++ T  ++L  C  +R+ D+         KTG 
Sbjct: 445 LVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGF 504

Query: 359 E------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           +                        +F  +    V SW AM++ Y+Q E   EA+ LF+E
Sbjct: 505 QFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKE 564

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           MQ +G+  D    A  +S+CA +  L  G+Q+HA +  +    D  V + L+ +Y++C +
Sbjct: 565 MQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGK 624

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              A   F +I   D + WNS+I+G + +    EA   F QM +       F+F   +S+
Sbjct: 625 VRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSA 684

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA-RQFFDMMHGKNTVT 573
            A +++   G+Q+HA I K G+ ++  V + LI +Y KCG+I  A RQFF+M   KN ++
Sbjct: 685 AANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPE-KNEIS 743

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN M+ GY+Q+G+G +A+ L++DM   GV P+ +TFV +L+ACSH GLVD G++ F SM+
Sbjct: 744 WNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMR 803

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
             HG+ P  +HY C++D LGR+G    A   ++EMP + D ++   LLS+C +H N+ + 
Sbjct: 804 EVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIG 863

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + AA  L  L+PK+SA Y LL+N+Y+  G+W      R++M +  + K+P  S
Sbjct: 864 EFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRS 916



 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 210/720 (29%), Positives = 358/720 (49%), Gaps = 87/720 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH  IL+ G   +  LC RL++LY                                 
Sbjct: 87  GWKLHGKILKMGFCAEVVLCERLMDLY-------------------------------IA 115

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             DL+ A  +FDEMP R +  WN ++   V   +  + L ++ +M  E   P   T A V
Sbjct: 116 FGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGV 175

Query: 127 FKASTALLDVEHG--RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            +      DV      + H   I  G + +++V N L+ LY K G+   A  VF+ + + 
Sbjct: 176 LRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKR 234

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ AM+SGL+++    EA+ +F  M    V       SSVL  C +    VE   F 
Sbjct: 235 DSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTK----VE---FY 287

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           +          G+Q+H L +K GF  + ++ N+L+ +Y++ G+   AE +F+ + +R  V
Sbjct: 288 KV---------GEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEV 338

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           S+N +I+G  Q+  S KA+EL ++M     +PD VT  ++L AC                
Sbjct: 339 SYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYA 398

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                              V+  DIKT  E F S  + +V  WN ML +Y   +N  E+ 
Sbjct: 399 IKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESF 458

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           K+F +MQ  G++P++ T   IL +C+++  ++ G+Q+H   LKT    + YV+S LI +Y
Sbjct: 459 KIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMY 518

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +K  + + A ++F R+ E D+V W +MIAG + +    EA   FK+M+   ++     FA
Sbjct: 519 AKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFA 578

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           + +S+CA + +  QG+Q+HAQ    GY +D+ VG+AL+ +Y +CG +  A   FD +  K
Sbjct: 579 SAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSK 638

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + ++WN +I G+AQ+G+ +EA+ L+  M  +G + +  TF   ++A ++   V +G +I 
Sbjct: 639 DNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQI- 697

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           ++M +  G +   +    +I    + G+  +AE    EMP K++ + W  +L+    H +
Sbjct: 698 HAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNE-ISWNAMLTGYSQHGH 756



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 163/603 (27%), Positives = 280/603 (46%), Gaps = 97/603 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  +L+ G   +T++CN L+ LYS+  N   A+ +F+ M  +D  S+N+       
Sbjct: 290 GEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNS------- 342

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LIS L + G  +KAL ++ KM  +   P  +T+AS+
Sbjct: 343 ------------------------LISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASL 378

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A +++  +  G++ H   IK G+  +I +  ALL LY KC   K A   F      N 
Sbjct: 379 LSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENV 438

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +  M+      D + E+ ++F  M  + +  +  +  S+L  C+              
Sbjct: 439 VLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSS------------- 485

Query: 247 DNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                R V  G+Q+H   +K GF+ ++++S+ L+DMYAK G +D A  IF  L E+ VVS
Sbjct: 486 ----LRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVS 541

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           W  MIAGY Q  +  +A+ L + M+  G   D +   + + AC                 
Sbjct: 542 WTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQAC 601

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              R G ++     FD + S    SWN+++S ++QS + +EA+ 
Sbjct: 602 VSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALS 661

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF +M   G + +  T    +S+ A +  ++ GKQ+HA  +KT    +  V++ LI +Y+
Sbjct: 662 LFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYA 721

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   + AER F  +PE + + WN+M+ G S +    +A   F+ M+Q  + P   +F  
Sbjct: 722 KCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVG 781

Query: 511 VLSSCAKLSSSFQG-------RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
           VLS+C+ +    +G       R+VH  + K  +       + ++++  + G +  AR+F 
Sbjct: 782 VLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHY------ACVVDLLGRSGLLSRARRFV 835

Query: 564 DMM 566
           + M
Sbjct: 836 EEM 838



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 146/576 (25%), Positives = 258/576 (44%), Gaps = 100/576 (17%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + GK  H++ ++ G+  D  L   L++LY KC++  +A   F     +++  WN +L 
Sbjct: 387 ALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVML- 445

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                     AY L D + E                     +  ++ +M  EG  P   T
Sbjct: 446 ---------VAYGLLDNLNE---------------------SFKIFTQMQMEGIEPNQFT 475

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
             S+ +  ++L  V+ G + H  V+K G   N+YV++ L+ +YAK G   HA+ +F  + 
Sbjct: 476 YPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK 535

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           E + V++TAM++G A+ ++  EAL +F+ M  + +  D++  +S +  CA    G+    
Sbjct: 536 EKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACA----GI---- 587

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
             Q+ N+      GQQ+H      G+  DL + N+L+ +YA+ G +  A   F  +  + 
Sbjct: 588 --QALNQ------GQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKD 639

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-------FEP------------------- 336
            +SWN +I+G+ Q     +A+ L  +M   G       F P                   
Sbjct: 640 NISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHA 699

Query: 337 -------DEVTSI-NMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                  D  T + N+L+    + G+I      F  MP  +  SWNAML+ YSQ  +  +
Sbjct: 700 MIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFK 759

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG-------KQVHAASLKTASHIDNY 440
           A+ LF +M+  GV P+  T   +LS+C+ +G+++ G       ++VH    K   +    
Sbjct: 760 ALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVV 819

Query: 441 VASGLIGIYSKCQRNELAERVFHRIP-ELD-IVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
              G  G+ S+      A R    +P + D +VC   + A +   ++DI  F     +  
Sbjct: 820 DLLGRSGLLSR------ARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLL-- 871

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
            E+ P   +   +LS+   ++  +  R    Q+ KD
Sbjct: 872 -ELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKD 906



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 182/359 (50%), Gaps = 3/359 (0%)

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
           GF  + V    ++   +  GD+     +FD MP   +S WN +L  +   +     + LF
Sbjct: 98  GFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLF 157

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGI-LESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           R M    VKPD  T A +L  C    +     +++HA ++        +V + LI +Y K
Sbjct: 158 RRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFK 217

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
                 A++VF  + + D V W +M++GLS +  + EA + F QM  + +YPT + F++V
Sbjct: 218 NGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSV 277

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS+C K+     G Q+H  + K G+  + +V +AL+ +Y + G+   A Q F+ M  ++ 
Sbjct: 278 LSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDE 337

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           V++N +I G +Q GY D+A+ L+K M    +KPD +T  ++L+ACS  G + VG + F+S
Sbjct: 338 VSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ-FHS 396

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
             +  G+   +     ++D   +      A          ++ V+W V+L +  L  N+
Sbjct: 397 YAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTE-TENVVLWNVMLVAYGLLDNL 454



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 144/304 (47%), Gaps = 6/304 (1%)

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
            A+  +YS  E     I     M+ RGV+ +  T   +L  C + G    G ++H   LK
Sbjct: 37  TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                +  +   L+ +Y      + A  VF  +P   + CWN ++       +       
Sbjct: 97  MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYC 551
           F++M Q ++ P + ++A VL  C      F    ++HA+    GY N +FV + LI++Y 
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYF 216

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           K G +  A++ FD +  +++V+W  M+ G +Q+G  +EAV L+  M  SGV P    F +
Sbjct: 217 KNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSS 276

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMP 669
           +L+AC+      VG E  + + L  G    L+ Y C  ++    R G+F  AE + + M 
Sbjct: 277 VLSACTKVEFYKVG-EQLHGLVLKQGFS--LETYVCNALVTLYSRLGNFIPAEQVFNAML 333

Query: 670 CKDD 673
            +D+
Sbjct: 334 QRDE 337



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 1/191 (0%)

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
           F   M +  +     ++  +L  C        G ++H +I K G+  ++ +   L+++Y 
Sbjct: 55  FLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYI 114

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
             GD+ GA   FD M  +    WN+++H +         + L++ M+   VKPD+ T+  
Sbjct: 115 AFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAG 174

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +L  C    +    VE  ++  + HG E  L     +ID   + G  + A+ + D +  K
Sbjct: 175 VLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQ-K 233

Query: 672 DDPVIWEVLLS 682
            D V W  +LS
Sbjct: 234 RDSVSWVAMLS 244


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/709 (32%), Positives = 390/709 (55%), Gaps = 54/709 (7%)

Query: 76  LFDEMPERNVVSWNNLISALVRNGLEEKALSVY-NKMSNEGFVPTHITLASVFKASTALL 134
           +FD M  +N++ WN L+S   RNGL    + V+ + +S+  F P + T  SV KA   +L
Sbjct: 101 VFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGIL 160

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           DV  G   HG+VIK+GL  +++V NAL+ +Y KCG    A+ VF+ M E N V++ +M+ 
Sbjct: 161 DVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMIC 220

Query: 195 GLAKTDRVVEALEMFRLMI-RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
             ++     ++ ++   M+  + +  D V++ ++L VCA EG   E D+           
Sbjct: 221 AFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEG---EVDI----------- 266

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G  +H L +KLG   ++ ++N+++ MY+K G ++ A++ F     ++VVSWN MI+ +
Sbjct: 267 --GMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAF 324

Query: 314 GQKYQSTKAIELLQRMKSCGFE--PDEVTSINMLVACV---------------------- 349
             +    +A  LLQ M+  G E   +EVT +N+L AC+                      
Sbjct: 325 SLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQH 384

Query: 350 ------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                       + G + +  ++F  +   +VSSWNA++  ++Q+ + ++A+ L  +M +
Sbjct: 385 VELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTY 444

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
            G +PD  T++ +L +CA +  L+ GK++H   L+     D +V + L+  Y  C +   
Sbjct: 445 SGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASS 504

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A  +F R+ + ++V WN+MI+G S N L  E+   F++     +   + +  +V  +C++
Sbjct: 505 ARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQ 564

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           LS+   G++ H  + K     D FVG ++I+MY K G I  +R+ FD +  KN  +WN +
Sbjct: 565 LSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAI 624

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I  +  +G+G EA+ LY+ M   G  PD  T++ IL AC H+GLV+ G++ F  MQ  + 
Sbjct: 625 IVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNL 684

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           +EP L+HY C+ID L RAG   +A  L++EMP + D  IW  LL SCR    + + ++ A
Sbjct: 685 IEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVA 744

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++L  L+P  +  Y LL+N+Y+ LG+WD +R VR++M E  + KD   S
Sbjct: 745 KKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCS 793



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 171/622 (27%), Positives = 289/622 (46%), Gaps = 74/622 (11%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANA-LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           D+E GRR H  V      +N YV N  L+ +YA CG    +  VF+ M   N + + A++
Sbjct: 58  DIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALV 117

Query: 194 SGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           SG  +     + +++F  ++       D+ +  SV+     + CG   DV          
Sbjct: 118 SGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVI-----KACGGILDVRL-------- 164

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G+ +H + IK+G   D+ + N+L+ MY K G +D A  +F  +PE ++VSWN MI  
Sbjct: 165 ---GEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICA 221

Query: 313 YGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRSGDIKTGREM----------- 360
           + +   S  + +LL  M    G  PD VT + +L  C   G++  G  +           
Sbjct: 222 FSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSE 281

Query: 361 ------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                   F    + +V SWN M+S++S   +  EA  L +EMQ
Sbjct: 282 EVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQ 341

Query: 397 FRG--VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQ 453
            +G  +K +  T+  +L +C     L S K++H  S +    H++  +++  I  Y+KC 
Sbjct: 342 IQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE--LSNAFILAYAKCG 399

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
               AE+VFH I +  +  WN++I G + N    +A     QM  +   P  F+ +++L 
Sbjct: 400 ALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLL 459

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           +CA L S   G+++H  + ++G   D FVG++L+  Y  CG    AR  FD M  KN V+
Sbjct: 460 ACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVS 519

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE----IF 629
           WN MI GY+QNG   E++ L++  ++ G++  +I  V++  ACS    + +G E    + 
Sbjct: 520 WNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVL 579

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI-WEVLLSSCRLHA 688
            ++Q +            +ID   ++G   E+  + D +  KD  V  W  ++ +  +H 
Sbjct: 580 KALQTEDAFVG-----CSIIDMYAKSGCIKESRKVFDGL--KDKNVASWNAIIVAHGIHG 632

Query: 689 NVRLAKRAAEELFRLDPKNSAP 710
           +    K A E   R+      P
Sbjct: 633 H---GKEAIELYERMKKVGQMP 651



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 157/661 (23%), Positives = 293/661 (44%), Gaps = 121/661 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H  +++ GL  D F+ N L+ +Y KC     A                        
Sbjct: 165 GEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAM----------------------- 201

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLAS 125
                   K+FD MPE N+VSWN++I A   NG    +  +  +M   EG +P  +T+ +
Sbjct: 202 --------KVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVT 253

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +        +V+ G   HGL +K+GL + + V NA++ +Y+KCG+   A   F + +  N
Sbjct: 254 ILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKN 313

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKA--VSIDSVSLSSVLGVCAREGCGVESDVF 243
            V++  M+S  +    V EA  + + M  +   +  + V++ +VL  C            
Sbjct: 314 VVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC-----------L 362

Query: 244 AQSDNKFSRNVHGQQV-HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
            +   +  + +HG    HC          + LSN+ +  YAK G ++SAE +F  + +++
Sbjct: 363 DKLQLRSLKELHGYSFRHCFQ-------HVELSNAFILAYAKCGALNSAEKVFHGIGDKT 415

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--- 359
           V SWN +I G+ Q     KA+ LL +M   G +PD  T  ++L+AC     ++ G+E   
Sbjct: 416 VSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHG 475

Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                           +FD M   ++ SWNAM+S YSQ+    E
Sbjct: 476 YVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYE 535

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           ++ LFR+    G++     +  +  +C+ +  L  GK+ H   LK     D +V   +I 
Sbjct: 536 SLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIID 595

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+K    + + +VF  + + ++  WN++I    ++    EA   +++M++    P +F+
Sbjct: 596 MYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFT 655

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +  +L +C            HA + ++G                     +   Q F+++ 
Sbjct: 656 YIGILMACG-----------HAGLVEEGL------------------KYFKEMQNFNLIE 686

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            K    +  +I   A+ G  D+A+RL  +M     + D+  + ++L +C   G +++G +
Sbjct: 687 PK-LEHYACLIDMLARAGRLDDALRLVNEMPE---EADNRIWSSLLRSCRTFGALEIGEK 742

Query: 628 I 628
           +
Sbjct: 743 V 743



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 207/419 (49%), Gaps = 27/419 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA + A  K   L  A K+F  + ++ V SWN LI    +NG   KAL +  +M+  G  
Sbjct: 389 NAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQ 448

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T++S+  A   L  +++G+  HG V++ GL+ + +V  +LLS Y  CG    A  +
Sbjct: 449 PDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVL 508

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+ M + N V++ AM+SG ++     E+L +FR  + + +    +++ SV G C++    
Sbjct: 509 FDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQ---- 564

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                   S  +  +  HG  +  L  +     D  +  S++DMYAK+G +  +  +F  
Sbjct: 565 -------LSALRLGKEAHGYVLKALQTE-----DAFVGCSIIDMYAKSGCIKESRKVFDG 612

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           L +++V SWN +I  +G      +AIEL +RMK  G  PD  T I +L+AC  +G ++ G
Sbjct: 613 LKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEG 672

Query: 358 REMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            + F  M +     P +  +  ++   +++    +A++L  EM     + D    + +L 
Sbjct: 673 LKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMP---EEADNRIWSSLLR 729

Query: 413 SCAAMGILESGKQVHAASLK-TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           SC   G LE G++V    L+      +NYV   L  +Y+   + +   RV   + E+ +
Sbjct: 730 SCRTFGALEIGEKVAKKLLELEPDKAENYVL--LSNLYAGLGKWDGVRRVRQMMKEIGL 786



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 246/551 (44%), Gaps = 76/551 (13%)

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           + N  +F   ++ L +TD +  AL + +   + A  I S+     +G+   + CG + D+
Sbjct: 2   QTNRPSFLQEIAALCETDNLTTALILIQSHSQNAAFI-SLQAKEAIGLLL-QACGNQKDI 59

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                 +  R +H      ++    +  D  L+  L+ MYA  G    + ++F N+  ++
Sbjct: 60  ------ETGRRLH----KFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKN 109

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSINMLVAC-----VRSGDIKT 356
           ++ WN +++GY +       +++   + S   F+PD  T  +++ AC     VR G++  
Sbjct: 110 LIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIH 169

Query: 357 G------------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHK 386
           G                               ++FD MP  ++ SWN+M+ ++S++   +
Sbjct: 170 GMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSR 229

Query: 387 EAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++  L  EM    G+ PD  T+  IL  CA  G ++ G  +H  ++K     +  V + +
Sbjct: 230 DSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAM 289

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM--RQNEMYP 503
           + +YSKC     A+  F +    ++V WN+MI+  SL     EAF   ++M  +  EM  
Sbjct: 290 VYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKA 349

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY-----VNDIFVGSALIEMYCKCGDIYG 558
            + +   VL +C          Q+ +  E  GY        + + +A I  Y KCG +  
Sbjct: 350 NEVTILNVLPAC------LDKLQLRSLKELHGYSFRHCFQHVELSNAFILAYAKCGALNS 403

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A + F  +  K   +WN +I G+AQNG   +A+ L   M  SG +PD  T  ++L AC+H
Sbjct: 404 AEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAH 463

Query: 619 SGLVDVGVEIF-----NSMQLDHGV-EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
              +  G EI      N ++ D  V   +L HY   I C    G    A +L D M  K 
Sbjct: 464 LKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHY---IHC----GKASSARVLFDRMKDK- 515

Query: 673 DPVIWEVLLSS 683
           + V W  ++S 
Sbjct: 516 NLVSWNAMISG 526



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 169/333 (50%), Gaps = 5/333 (1%)

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAERVF 462
           +  + ++L +C     +E+G+++H     +  + ++YV  + LI +Y+ C     +  VF
Sbjct: 43  KEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVF 102

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAF-MFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
             +   +++ WN++++G + N L  +   +F   +   +  P  F+F +V+ +C  +   
Sbjct: 103 DNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDV 162

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G  +H  + K G V D+FVG+AL+ MY KCG +  A + FD M   N V+WN MI  +
Sbjct: 163 RLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAF 222

Query: 582 AQNGYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           ++NG+  ++  L  +M+   G+ PD +T V IL  C+  G VD+G+ I + + +  G+  
Sbjct: 223 SENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGI-HGLAVKLGLSE 281

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
            +     M+    + G+ +EA+M   +   K + V W  ++S+  L  +V  A    +E+
Sbjct: 282 EVMVNNAMVYMYSKCGYLNEAQMSFVKNNNK-NVVSWNTMISAFSLEGDVNEAFNLLQEM 340

Query: 701 FRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
                +  A    + N+  +      LR+++EL
Sbjct: 341 QIQGEEMKANEVTILNVLPACLDKLQLRSLKEL 373


>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 974

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 259/818 (31%), Positives = 416/818 (50%), Gaps = 100/818 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  + + G    +F    LI++Y+KC     A+ +FD   + D  SW A+++   +
Sbjct: 161 GRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVR 220

Query: 67  SD-----------------------------------DLEFAYKLFDEMPERNVVSWNNL 91
                                                 L  A KLF ++P  NVV+WN +
Sbjct: 221 DGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVM 280

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           IS   + G  E+A+S + ++   G   T  +L SV  A  +L  + +G   H    K GL
Sbjct: 281 ISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGL 340

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D N+YV +AL+++YAKC     A  VF  + E N V + AM+ G A+     E +E F  
Sbjct: 341 DDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSC 400

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH----GQQVHCLTIKLG 267
           M R     D  + +S+   CA                    ++H    G Q+H + IK  
Sbjct: 401 MKRHGPQPDEFTFTSIFSACA--------------------SLHYLNFGGQLHTVMIKNK 440

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F ++L ++N+L+DMYAK+G +  A   F  +     VSWN +I GY Q+  + +A  + +
Sbjct: 441 FASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFR 500

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTG------------------------------ 357
           RM S G  PDEV+  +++ AC    ++K G                              
Sbjct: 501 RMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCG 560

Query: 358 -----REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                R++F SMPS +V S NA+++ Y+   + +EAI LF+E+Q  G+KP   T A +L 
Sbjct: 561 VVLAARDVFYSMPSRNVVSVNALIAGYTMG-HLEEAIHLFQEIQMVGLKPTEVTFAGLLD 619

Query: 413 SCAAMGILESGKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERVFHRI--PELD 469
            C    +L  G+Q+H   +K         V   L+ +Y   QR   +E +F  +  P+  
Sbjct: 620 GCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPK-G 678

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W ++I+G +  +   +A  F++ MR + + P Q +FA+VL +CA +SS   G+++H+
Sbjct: 679 LVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHS 738

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEMIHGYAQNGYGD 588
            I   G+  D    S+LI+MY KCGD+ G+ Q F +M    N ++WN MI G A+NGY +
Sbjct: 739 LIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAE 798

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
           EA+ ++K M    + PD++TF+ +L+ACSH+G V  G ++F+ M  ++ ++P +DH  CM
Sbjct: 799 EALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCM 858

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           +D LGR G  +EAE  I+++ CK DP++W  LL +CR H +    KRAA++L  L P++S
Sbjct: 859 VDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSS 918

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + Y LL++IY+    W    ++R  M    + K P YS
Sbjct: 919 SSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYS 956



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 213/829 (25%), Positives = 371/829 (44%), Gaps = 131/829 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A    K++H+  L+ G+     L N +++LY KC N   AQ  F ++  KD+++WN++L
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           S       +   + LF  + +  V  WN+ +                         P   
Sbjct: 115 S-------MYLDHGLFATVVQSFVCMWNHEVR------------------------PNEF 143

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T A V  A + L DV  GR+ H  V K G     +    L+ +YAKC + + A  VF+  
Sbjct: 144 TFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGA 203

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC---------- 231
              + V++TA+++G  +    +EA+++F  M R   + D ++L +V+             
Sbjct: 204 LNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADAR 263

Query: 232 ---------------------AREGCGVESDVF----AQSDNKFSRNVHG---------- 256
                                A+ G   E+  F     ++  K +R+  G          
Sbjct: 264 KLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS 323

Query: 257 -----QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
                  VH    K G + ++++ ++L++MYAK   MD+A+ +F++L ER++V WN M+ 
Sbjct: 324 MLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------------- 348
           G+ Q   + + +E    MK  G +PDE T  ++  AC                       
Sbjct: 384 GFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFAS 443

Query: 349 ------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                        +SG +K  R+ F+ M      SWNA++  Y Q E + EA  +FR M 
Sbjct: 444 NLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
             GV PD  +LA I+S+CA +  L+ G+Q H   +K          S LI +Y KC    
Sbjct: 504 SNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVL 563

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A  VF+ +P  ++V  N++IAG ++  L+ EA   F++++   + PT+ +FA +L  C 
Sbjct: 564 AARDVFYSMPSRNVVSVNALIAGYTMGHLE-EAIHLFQEIQMVGLKPTEVTFAGLLDGCD 622

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDI-FVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTW 574
                  GRQ+H Q+ K G+++    V  +L+ +Y        +   F ++ + K  V W
Sbjct: 623 GAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVW 682

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
             +I GYAQ  + ++A++ Y+ M +  + PD   F ++L AC+    +  G EI +S+  
Sbjct: 683 TALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEI-HSLIF 741

Query: 635 DHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
             G    +D  TC  +ID   + G    +  +  EMP +++ + W  ++      A    
Sbjct: 742 HTGFN--MDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGL---AKNGY 796

Query: 693 AKRAAEELFRLDPKNSAP----YSLLANIYSSLGRWDDLRAVRELMSEN 737
           A+ A E   +++ ++  P    +  + +  S  GR  + R V +LM  N
Sbjct: 797 AEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNN 845



 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 160/549 (29%), Positives = 284/549 (51%), Gaps = 25/549 (4%)

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K    L  +   +  H   +KIG+     + N ++ LY KCG    A   F  + + +  
Sbjct: 49  KPKPVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVF 108

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            + +++S           ++ F  M    V  +  + + VL  C+    G++   F    
Sbjct: 109 AWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACS----GLQDVNF---- 160

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G+QVHC   K GF         L+DMYAK   +  A ++F        VSW 
Sbjct: 161 --------GRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWT 212

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSP 367
            +IAGY +     +A+++  RM+  G  PD++T + ++ A V  G +   R++F  +P+P
Sbjct: 213 ALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNP 272

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +V +WN M+S +++    +EAI  F E++  G+K  R++L  +LS+ A++ +L  G  VH
Sbjct: 273 NVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVH 332

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
           A + K     + YV S L+ +Y+KC + + A++VF+ + E +IV WN+M+ G + N L  
Sbjct: 333 AQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQ 392

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           E   FF  M+++   P +F+F ++ S+CA L     G Q+H  + K+ + +++FV +AL+
Sbjct: 393 EVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALV 452

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
           +MY K G +  AR+ F++M   + V+WN +I GY Q  Y DEA  +++ M+++GV PD++
Sbjct: 453 DMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEV 512

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC----MIDCLGRAGHFHEAEM 663
           +  +I++AC++   +  G +    +     V+  LD  TC    +ID   + G    A  
Sbjct: 513 SLASIVSACANVQELKRGQQCHCLL-----VKVGLDTSTCAGSSLIDMYVKCGVVLAARD 567

Query: 664 LIDEMPCKD 672
           +   MP ++
Sbjct: 568 VFYSMPSRN 576


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 256/783 (32%), Positives = 397/783 (50%), Gaps = 95/783 (12%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG  LH+H+L++GL       N L+ LYS+C           ++P               
Sbjct: 22  AGAHLHSHLLKSGLL--AGFSNHLLTLYSRC-----------RLPSA------------- 55

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                  A  +FDE+P+   VSW++L++A   NG+   AL  +  M   G       L  
Sbjct: 56  -------ARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPV 108

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM---- 181
           V K +    DV  G + H L +   L  +++VANAL+++Y   G    A  +F+E     
Sbjct: 109 VLKCAP---DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVG 165

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E N V++  M+S   K D+  +A+ +FR M+      +    S V+  C          
Sbjct: 166 GERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTG-------- 217

Query: 242 VFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                    SR++  G+QVH   ++ G+E D+  +N+L+DMY+K GD++ A  +F  +P 
Sbjct: 218 ---------SRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPA 268

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
             VVSWN  I+G        +A+ELL +MKS G  P+  T  ++L AC  +G    GR++
Sbjct: 269 ADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQI 328

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              FD MP   +  WNA++S  S    H
Sbjct: 329 HGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRH 388

Query: 386 KEAIKLFREMQFRGVKPD--RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
            E + LF  M+  G+  D  RTTLA +L S A+   +   +QVHA + K     D++V +
Sbjct: 389 GEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVIN 448

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           GLI  Y KC + + A +VF      DI+   +M+  LS      +A   F QM +  + P
Sbjct: 449 GLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEP 508

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
             F  +++L++C  LS+  QG+QVHA + K  + +D+F G+AL+  Y KCG I  A   F
Sbjct: 509 DSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAF 568

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
             +  +  V+W+ MI G AQ+G+G  A+ L+  M+  GV P+ IT  ++L+AC+H+GLVD
Sbjct: 569 SGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVD 628

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
              + F SM+   G++   +HY CMID LGRAG   +A  L++ MP + +  +W  LL +
Sbjct: 629 DAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGA 688

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
            R+H +  L + AAE+LF L+P+ S  + LLAN Y+S G WD++  VR+LM ++ + K+P
Sbjct: 689 SRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEP 748

Query: 744 AYS 746
           A S
Sbjct: 749 AMS 751



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 37/220 (16%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A+  GK +HAH+++     D F  N L+  Y+KC +   A   F  +P + I SW+A   
Sbjct: 525 AYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSA--- 581

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                       +I  L ++G  ++AL ++++M +EG  P HIT
Sbjct: 582 ----------------------------MIGGLAQHGHGKRALDLFHRMLDEGVAPNHIT 613

Query: 123 LASVFKASTALLDVEHGRR-CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           L SV  A      V+  ++    +    G+D+       ++ +  + G  + A+ +   M
Sbjct: 614 LTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNM 673

Query: 182 S-EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
             + N   + A++       RV    E+ R+   K  +++
Sbjct: 674 PFQANAAVWGALLG----ASRVHRDPELGRMAAEKLFTLE 709


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1047

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/772 (31%), Positives = 399/772 (51%), Gaps = 82/772 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA I+  GL   T +CN LI+LYS+      A+ +FD +  KD  SW A          
Sbjct: 192 IHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVA---------- 241

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                                +IS L +N  E +A+ ++  M   G +PT    +SV  A
Sbjct: 242 ---------------------MISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSA 280

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              +  +E G + HGLV+K+G   + YV NAL+SLY   G    A  +F  MS+ + VT+
Sbjct: 281 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTY 340

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             +++GL++     +A+E+F+ M    +  DS +L+S++  C+ +G              
Sbjct: 341 NTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDG------------TL 388

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
           FS    GQQ+H  T KLGF ++  +  +LL++YAK  D+++A   F      +VV WNVM
Sbjct: 389 FS----GQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVM 444

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPS- 368
           +  YG       +  + ++M+     P++ T  ++L  C+R GD++ G ++   +   S 
Sbjct: 445 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSF 504

Query: 369 ----------------------------------VSSWNAMLSSYSQSENHKEAIKLFRE 394
                                             V SW  M++ Y+Q     +A+  FR+
Sbjct: 505 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 564

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M  RG++ D   L   +S+CA +  L+ G+Q+HA +  +    D    + L+ +YSKC  
Sbjct: 565 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGN 624

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E A   F +    D + WN++++G   +  + EA   F +M +  +    F+F + + +
Sbjct: 625 IEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKA 684

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
            ++ ++  QG+QVHA I K GY ++  V +A+I MY KCG I  A++ F  +  KN V+W
Sbjct: 685 ASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSW 744

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI+ Y+++G+G EA+  +  MI S V+P+ +T V +L+ACSH GLVD G+E F SM  
Sbjct: 745 NAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNT 804

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           ++G+ P  +HY C++D L RAG    A+  I EMP + D ++W  LLS+C +H N+ + +
Sbjct: 805 EYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGE 864

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA  L  L+P++SA Y LL+N+Y+   +WD     R+ M E  + K+P  S
Sbjct: 865 FAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQS 916



 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 198/721 (27%), Positives = 346/721 (47%), Gaps = 91/721 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH+ IL+ G  ++  L  +L++ Y    +   A  +FD+MP + I++WN        
Sbjct: 87  GRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWN-------- 138

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+  E+  R+               L  K   ++ +M NE   P   T + V
Sbjct: 139 --------KMIKELASRS---------------LSGKVFCLFGRMVNENVTPNEGTFSGV 175

Query: 127 FKA----STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            +A    S A   VE   + H  +I  GL K+  V N L+ LY++ G+   A  VF+ + 
Sbjct: 176 LEACRGGSVAFDVVE---QIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLY 232

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             +  ++ AM+SGL+K +  VEA+ +F  M    +     + SSVL  C +    +ES  
Sbjct: 233 LKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKK----IESLE 288

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+Q+H L +KLGF +D ++ N+L+ +Y   G + SAE IFSN+ +R 
Sbjct: 289 I------------GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRD 336

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG---------- 352
            V++N +I G  Q     KA+EL +RM+  G EPD  T  +++VAC   G          
Sbjct: 337 AVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHA 396

Query: 353 -------------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                    DI+T    F      +V  WN ML +Y   ++ + 
Sbjct: 397 YTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRN 456

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           + ++FR+MQ   + P++ T   IL +C  +G LE G+Q+H+  +KT+  ++ YV S LI 
Sbjct: 457 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLID 516

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+K  + + A  +  R    D+V W +MIAG +  + D +A   F+QM    +   +  
Sbjct: 517 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 576

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
               +S+CA L +  +G+Q+HAQ    G+ +D+   +AL+ +Y KCG+I  A   F+   
Sbjct: 577 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTE 636

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
             + + WN ++ G+ Q+G  +EA+R++  M   G+  ++ TF + + A S +  +  G +
Sbjct: 637 AGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQ 696

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           + +++    G +   +    +I    + G   +A+    E+  K++ V W  ++++   H
Sbjct: 697 V-HAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNE-VSWNAMINAYSKH 754

Query: 688 A 688
            
Sbjct: 755 G 755



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 162/632 (25%), Positives = 283/632 (44%), Gaps = 57/632 (9%)

Query: 109 NKMSNEGFVPTHITLASVFKA---STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
           + + N G  P H TL  + +    +   LD   GR+ H  ++K+G D N  ++  LL  Y
Sbjct: 56  DSVENCGIRPNHQTLKWLLEGCLKTNGSLD--EGRKLHSQILKLGFDNNACLSEKLLDFY 113

Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
              G    A+ VF+EM E    T+  M+  LA      +   +F  M+ + V+ +  + S
Sbjct: 114 LFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFS 173

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
            VL  C   G  V  DV              +Q+H   I  G      + N L+D+Y++N
Sbjct: 174 GVLEAC--RGGSVAFDVV-------------EQIHARIIYQGLGKSTIVCNPLIDLYSRN 218

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
           G +D A  +F  L  +   SW  MI+G  +     +AI L   M   G  P      ++L
Sbjct: 219 GFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVL 278

Query: 346 VACVRSGDIKTGREM-----------------------------------FDSMPSPSVS 370
            AC +   ++ G ++                                   F +M      
Sbjct: 279 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAV 338

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           ++N +++  SQ    ++A++LF+ MQ  G++PD  TLA ++ +C++ G L SG+Q+HA +
Sbjct: 339 TYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYT 398

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
            K     ++ +   L+ +Y+KC   E A   F      ++V WN M+    L      +F
Sbjct: 399 TKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSF 458

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             F+QM+  E+ P Q+++ ++L +C +L     G Q+H+QI K  +  + +V S LI+MY
Sbjct: 459 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMY 518

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            K G +  A        GK+ V+W  MI GY Q  + D+A+  ++ M+  G++ D++   
Sbjct: 519 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 578

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
             ++AC+    +  G +I ++     G    L     ++    + G+  EA +  ++   
Sbjct: 579 NAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEA 637

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
            D+ + W  L+S  +   N   A R    + R
Sbjct: 638 GDN-IAWNALVSGFQQSGNNEEALRVFARMNR 668



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 243/547 (44%), Gaps = 82/547 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  +L+ G   DT++CN L+ LY    +  SA+H+F                    
Sbjct: 290 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSN------------------ 331

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        M +R+ V++N LI+ L + G  EKA+ ++ +M  +G  P   TLAS+
Sbjct: 332 -------------MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASL 378

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++   +  G++ H    K+G   N  +  ALL+LYAKC   + A+  F E    N 
Sbjct: 379 VVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENV 438

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +  M+      D +  +  +FR M  + +  +  +  S+L  C R G           
Sbjct: 439 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG----------- 487

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D +      G+Q+H   IK  F+ + ++ + L+DMYAK G +D+A  I      + VVSW
Sbjct: 488 DLEL-----GEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 542

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
             MIAGY Q     KA+   ++M   G   DEV   N + AC     +K G+++      
Sbjct: 543 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 602

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F+   +    +WNA++S + QS N++EA+++
Sbjct: 603 SGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 662

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F  M   G+  +  T    + + +    ++ GKQVHA   KT    +  V + +I +Y+K
Sbjct: 663 FARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAK 722

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     A++ F  +   + V WN+MI   S +    EA   F QM  + + P   +   V
Sbjct: 723 CGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGV 782

Query: 512 LSSCAKL 518
           LS+C+ +
Sbjct: 783 LSACSHI 789



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 203/453 (44%), Gaps = 82/453 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ LHA+  + G   +  +   L+ LY+KC++  +A + F +   +++  WN +L A  
Sbjct: 390 SGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYG 449

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
             DDL  ++++F +M                   +EE              VP   T  S
Sbjct: 450 LLDDLRNSFRIFRQMQ------------------IEE-------------IVPNQYTYPS 478

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           + K    L D+E G + H  +IK     N YV + L+ +YAK G    A  +    +  +
Sbjct: 479 ILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 538

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T M++G  + +   +AL  FR M+ + +  D V L++ +  CA    G+++     
Sbjct: 539 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA----GLQA----- 589

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     GQQ+H      GF +DL   N+L+ +Y+K G+++ A + F        ++
Sbjct: 590 -------LKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIA 642

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
           WN +++G+ Q   + +A+ +  RM   G + +  T  + + A   + ++K G+++     
Sbjct: 643 WNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVIT 702

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         F  +   +  SWNAM+++YS+     EA+ 
Sbjct: 703 KTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALD 762

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            F +M    V+P+  TL  +LS+C+ +G+++ G
Sbjct: 763 SFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 795


>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 1441

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 259/818 (31%), Positives = 415/818 (50%), Gaps = 100/818 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  + + G    +F    LI++Y+KC     A+ +FD   + D  SW A+++   +
Sbjct: 161 GRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVR 220

Query: 67  SD-----------------------------------DLEFAYKLFDEMPERNVVSWNNL 91
                                                 L  A KLF ++P  NVV+WN +
Sbjct: 221 DGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVM 280

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           IS   + G  E+A+S + ++   G   T  +L SV  A  +L  + +G   H    K GL
Sbjct: 281 ISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGL 340

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D N+YV +AL+++YAKC     A  VF  + E N V + AM+ G A+     E +E F  
Sbjct: 341 DDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSC 400

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH----GQQVHCLTIKLG 267
           M R     D  + +S+   CA                    ++H    G Q+H + IK  
Sbjct: 401 MKRHGPQPDEFTFTSIFSACA--------------------SLHYLNFGGQLHTVMIKNK 440

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F ++L ++N+L+DMYAK+G +  A   F  +     VSWN +I GY Q+  + +A  + +
Sbjct: 441 FASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFR 500

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTG------------------------------ 357
           RM S G  PDEV+  +++ AC    ++K G                              
Sbjct: 501 RMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCG 560

Query: 358 -----REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                R++F SMPS +V S NA+++ Y+   + +EAI LF+E+Q  G+KP   T A +L 
Sbjct: 561 VVLAARDVFYSMPSRNVVSVNALIAGYTMG-HLEEAIHLFQEIQMVGLKPTEVTFAGLLD 619

Query: 413 SCAAMGILESGKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERVFHRI--PELD 469
            C    +L  G+Q+H   +K         V   L+ +Y   QR   +E +F  +  P+  
Sbjct: 620 GCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPK-G 678

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W ++I+G +  +   +A  F++ MR + + P Q +FA+VL +CA +SS   G+++H+
Sbjct: 679 LVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHS 738

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEMIHGYAQNGYGD 588
            I   G+  D    S+LI+MY KCGD+ G+ Q F +M    N ++WN MI G A+NGY +
Sbjct: 739 LIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAE 798

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
           EA+ ++K M    + PD++TF+ +L+ACSH+G V  G ++F+ M  ++ + P +DH  CM
Sbjct: 799 EALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCM 858

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           +D LGR G  +EAE  I+++ CK DP++W  LL +CR H +    KRAA++L  L P++S
Sbjct: 859 VDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSS 918

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + Y LL++IY+    W    ++R  M    + K P YS
Sbjct: 919 SSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYS 956



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 213/829 (25%), Positives = 371/829 (44%), Gaps = 131/829 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A    K++H+  L+ G+     L N +++LY KC N   AQ  F ++  KD+++WN++L
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           S       +   + LF  + +  V  WN+ +                         P   
Sbjct: 115 S-------MYLDHGLFATVVQSFVCMWNHEVR------------------------PNEF 143

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T A V  A + L DV  GR+ H  V K G     +    L+ +YAKC + + A  VF+  
Sbjct: 144 TFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGA 203

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC---------- 231
              + V++TA+++G  +    +EA+++F  M R   + D ++L +V+             
Sbjct: 204 LNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADAR 263

Query: 232 ---------------------AREGCGVESDVF----AQSDNKFSRNVHG---------- 256
                                A+ G   E+  F     ++  K +R+  G          
Sbjct: 264 KLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS 323

Query: 257 -----QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
                  VH    K G + ++++ ++L++MYAK   MD+A+ +F++L ER++V WN M+ 
Sbjct: 324 MLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------------- 348
           G+ Q   + + +E    MK  G +PDE T  ++  AC                       
Sbjct: 384 GFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFAS 443

Query: 349 ------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                        +SG +K  R+ F+ M      SWNA++  Y Q E + EA  +FR M 
Sbjct: 444 NLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
             GV PD  +LA I+S+CA +  L+ G+Q H   +K          S LI +Y KC    
Sbjct: 504 SNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVL 563

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A  VF+ +P  ++V  N++IAG ++  L+ EA   F++++   + PT+ +FA +L  C 
Sbjct: 564 AARDVFYSMPSRNVVSVNALIAGYTMGHLE-EAIHLFQEIQMVGLKPTEVTFAGLLDGCD 622

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDI-FVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTW 574
                  GRQ+H Q+ K G+++    V  +L+ +Y        +   F ++ + K  V W
Sbjct: 623 GAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVW 682

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
             +I GYAQ  + ++A++ Y+ M +  + PD   F ++L AC+    +  G EI +S+  
Sbjct: 683 TALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEI-HSLIF 741

Query: 635 DHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
             G    +D  TC  +ID   + G    +  +  EMP +++ + W  ++      A    
Sbjct: 742 HTGFN--MDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGL---AKNGY 796

Query: 693 AKRAAEELFRLDPKNSAP----YSLLANIYSSLGRWDDLRAVRELMSEN 737
           A+ A E   +++ ++  P    +  + +  S  GR  + R V +LM  N
Sbjct: 797 AEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNN 845



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 160/549 (29%), Positives = 284/549 (51%), Gaps = 25/549 (4%)

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K    L  +   +  H   +KIG+     + N ++ LY KCG    A   F  + + +  
Sbjct: 49  KPKPVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVF 108

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            + +++S           ++ F  M    V  +  + + VL  C+    G++   F    
Sbjct: 109 AWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACS----GLQDVNF---- 160

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G+QVHC   K GF         L+DMYAK   +  A ++F        VSW 
Sbjct: 161 --------GRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWT 212

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSP 367
            +IAGY +     +A+++  RM+  G  PD++T + ++ A V  G +   R++F  +P+P
Sbjct: 213 ALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNP 272

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +V +WN M+S +++    +EAI  F E++  G+K  R++L  +LS+ A++ +L  G  VH
Sbjct: 273 NVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVH 332

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
           A + K     + YV S L+ +Y+KC + + A++VF+ + E +IV WN+M+ G + N L  
Sbjct: 333 AQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQ 392

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           E   FF  M+++   P +F+F ++ S+CA L     G Q+H  + K+ + +++FV +AL+
Sbjct: 393 EVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALV 452

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
           +MY K G +  AR+ F++M   + V+WN +I GY Q  Y DEA  +++ M+++GV PD++
Sbjct: 453 DMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEV 512

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC----MIDCLGRAGHFHEAEM 663
           +  +I++AC++   +  G +    +     V+  LD  TC    +ID   + G    A  
Sbjct: 513 SLASIVSACANVQELKRGQQCHCLL-----VKVGLDTSTCAGSSLIDMYVKCGVVLAARD 567

Query: 664 LIDEMPCKD 672
           +   MP ++
Sbjct: 568 VFYSMPSRN 576


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 255/780 (32%), Positives = 404/780 (51%), Gaps = 93/780 (11%)

Query: 8   KLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           K +HAHI+  G    D FL N L+  YSK N    AQ                       
Sbjct: 71  KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQ----------------------- 107

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK-MSNEGFVPTHITLAS 125
                   KLFD MP RN+V+W++++S   ++G   +AL ++ + M +    P    LAS
Sbjct: 108 --------KLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILAS 159

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V +A T L ++    + HG V+K G  +++YV  +L+  YAK G+   A  +F+ +    
Sbjct: 160 VVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKT 219

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR----EGCGVESD 241
            VT+TA+++G AK  R   +L++F  M    V  D   +SSVL  C+     EG      
Sbjct: 220 TVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEG------ 273

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                         G+Q+H   ++ GF+ D+ + N ++D Y K   + +   +F+ L ++
Sbjct: 274 --------------GKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDK 319

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
            VVSW  MIAG  Q      A++L   M   G++PD     ++L +C             
Sbjct: 320 DVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVH 379

Query: 349 -------------VRSG---------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                        V++G          +   R++FD + + +V S+NAM+  YS+ +   
Sbjct: 380 AYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLV 439

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA+ LFREM+     P   T   +L   +++ +LE   Q+H   +K    +D++  S LI
Sbjct: 440 EALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALI 499

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +YSKC     A  VF  I + DIV WN+M +G S    + E+   +K ++ + + P +F
Sbjct: 500 DVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEF 559

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +FA V+++ + ++S   G+Q H Q+ K G  +D FV ++L++MY KCG I  + + F   
Sbjct: 560 TFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSST 619

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
           + ++   WN MI  YAQ+G   +A+ +++ MI  GVKP+ +TFV +L+ACSH+GL+D+G 
Sbjct: 620 NQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGF 679

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
             F SM    G+EP +DHY CM+  LGRAG  +EA+  + +MP K   V+W  LLS+CR+
Sbjct: 680 HHFESMS-KFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRV 738

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             +V L   AAE     DP +S  Y LL+NI++S G W  +R VRE M  + +VK+P +S
Sbjct: 739 SGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWS 798



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/513 (23%), Positives = 235/513 (45%), Gaps = 89/513 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +H ++LR G   D  + N +I+ Y KC+   + + LF+++  KD+           
Sbjct: 273 GGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDV----------- 321

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                               VSW  +I+  ++N     A+ ++ +M  +G+ P      S
Sbjct: 322 --------------------VSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTS 361

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  +  +L  ++ GR+ H   IK+ +D + +V N L+ +YAKC    +A  VF+ ++  N
Sbjct: 362 VLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAIN 421

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM+ G ++ D++VEAL++FR M    +S+   +L + + +               
Sbjct: 422 VVSYNAMIEGYSRQDKLVEALDLFREM---RLSLSPPTLLTFVSL-------------LG 465

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
             +         Q+HCL IK G   D    ++L+D+Y+K   +  A ++F  + +R +V 
Sbjct: 466 LSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVV 525

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN M +GY Q+ ++ ++++L + ++    +P+E T   ++ A                  
Sbjct: 526 WNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVI 585

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G I+   + F S     ++ WN+M+S+Y+Q  +  +A++
Sbjct: 586 KMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALE 645

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK---TASHIDNYVASGLIG 447
           +F  M   GVKP+  T   +LS+C+  G+L+ G   H  S+        ID+Y    ++ 
Sbjct: 646 VFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFH-HFESMSKFGIEPGIDHYAC--MVS 702

Query: 448 IYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           +  +  +   A+    ++P +   V W S+++ 
Sbjct: 703 LLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSA 735



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 208/421 (49%), Gaps = 54/421 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA+ ++  + +D F+ N LI++Y+KC++  +A+ +FD +   ++ S+NA++    +
Sbjct: 375 GRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSR 434

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D L  A  LF EM                R  L                 PT +T  S+
Sbjct: 435 QDKLVEALDLFREM----------------RLSLSP---------------PTLLTFVSL 463

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              S++L  +E   + H L+IK G+  + +  +AL+ +Y+KC     A  VFEE+ + + 
Sbjct: 464 LGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDI 523

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + AM SG ++     E+L++++ +    +  +  + ++V+               A +
Sbjct: 524 VVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVI---------------AAA 568

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            N  S   HGQQ H   IK+G + D  ++NSL+DMYAK G ++ +   FS+  +R +  W
Sbjct: 569 SNIASLR-HGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACW 627

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N MI+ Y Q   + KA+E+ +RM   G +P+ VT + +L AC  +G +  G   F+SM  
Sbjct: 628 NSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSK 687

Query: 367 ----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
               P +  +  M+S   ++    EA +  ++M    +KP       +LS+C   G +E 
Sbjct: 688 FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMP---IKPAAVVWRSLLSACRVSGHVEL 744

Query: 423 G 423
           G
Sbjct: 745 G 745


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/725 (33%), Positives = 392/725 (54%), Gaps = 53/725 (7%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N ++    K+  +E A K+F+ +  +++V+W  +IS L +NGLEE+A+ ++  M      
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           PT   L+SV  AST +   E G + H LVIK G     YV N L++LY++      A  +
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  M+  + V++ +++SGL +      ALE+F  M R  +  D ++++S+L  CA  G  
Sbjct: 319 FSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGA- 377

Query: 238 VESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                           +H G Q+H   IK G  AD+ L  SLLD+Y+K  D+++A   F 
Sbjct: 378 ----------------LHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFL 421

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD--- 353
                ++V WNVM+  YGQ    + + E+ ++M+  G  P++ T  ++L  C   G    
Sbjct: 422 TTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYL 481

Query: 354 --------IKTGREM------------------------FDSMPSPSVSSWNAMLSSYSQ 381
                   IKTG ++                           +P   V SW AM++ Y Q
Sbjct: 482 GEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQ 541

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
            +   EA++LF EM++RG++ D    A  +S+CA +  L  G+Q+HA S       D  +
Sbjct: 542 HDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSI 601

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + LI +Y++C R + A   F +I + + + WNS+++GL+ +    EA   F +M + E 
Sbjct: 602 NNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEA 661

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
               F++ + +S+ A L++  QG+Q+H+ + K GY ++  V ++LI +Y K G I  A +
Sbjct: 662 EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWR 721

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F+ M  +N ++WN MI GY+Q+G G EA+RL+++M   G+ P+ +TFV +L+ACSH GL
Sbjct: 722 EFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGL 781

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           V  G++ F SM   H + P  +HY C++D LGRAG    A   I EMP   D +IW  LL
Sbjct: 782 VKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLL 841

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           S+C +H N+ + +RAA  L  L+P++SA Y L++NIY+   +W      R+LM +  + K
Sbjct: 842 SACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKK 901

Query: 742 DPAYS 746
           +P  S
Sbjct: 902 EPGRS 906



 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 193/671 (28%), Positives = 334/671 (49%), Gaps = 54/671 (8%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           +  D   A K+FDE   R+V SWN +I   V      +   ++ +M  EG  P   T A 
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAG 164

Query: 126 VFKASTAL-LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           V KA     +   + ++ H      G D +  VAN L+ LY+K G+ + A  VF  +   
Sbjct: 165 VLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK 224

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + VT+ AM+SGL++     EA+ +F  M    +      LSSVL                
Sbjct: 225 DIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVL---------------- 268

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            +  K      G+Q+HCL IK GF ++ ++ N L+ +Y+++  + SAE IFS +  R  V
Sbjct: 269 SASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGV 328

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG------------ 352
           S+N +I+G  Q+  S +A+EL  +M+    +PD +T  ++L AC   G            
Sbjct: 329 SYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHA 388

Query: 353 -----------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                  D++T  + F +  + ++  WN ML +Y Q +N  ++ 
Sbjct: 389 IKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSF 448

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           ++FR+MQ  G+ P++ T   IL +C ++G L  G+Q+H   +KT   ++ YV S LI +Y
Sbjct: 449 EIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMY 508

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +K  +  LA R+  R+PE D+V W +MIAG   + +  EA   F++M    +      FA
Sbjct: 509 AKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFA 568

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           + +S+CA + +  QG+Q+HAQ    G+  D+ + +ALI +Y +CG I  A   F+ +  K
Sbjct: 569 SAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDK 628

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           N ++WN ++ G AQ+GY +EA++++  M+ +  + +  T+ + ++A +    +  G +I 
Sbjct: 629 NNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQI- 687

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           +SM L  G +   +    +I    ++G   +A    ++M  + + + W  +++    H  
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVISWNAMITGYSQHGC 746

Query: 690 VRLAKRAAEEL 700
              A R  EE+
Sbjct: 747 GMEALRLFEEM 757



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 275/578 (47%), Gaps = 54/578 (9%)

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           R H  + K G D    + ++L+  Y + G    AV VF+E S  +  ++  M+       
Sbjct: 79  RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQK 138

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              +   +FR M+ + ++ +  + + VL  C               D  F+   + +QVH
Sbjct: 139 SNFQVFCLFRRMLAEGITPNGYTFAGVLKACV------------GGDIAFN---YVKQVH 183

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
             T   GF++   ++N L+D+Y+KNG ++SA+ +F+ +  + +V+W  MI+G  Q     
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243

Query: 321 KAIELLQRMKSCGFEP----------------------------------DEVTSINMLV 346
           +AI L   M +    P                                   E    N LV
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303

Query: 347 ACV-RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           A   RS  + +   +F +M S    S+N+++S   Q      A++LF +MQ   +KPD  
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T+A +LS+CA++G L  G Q+H+ ++K     D  +   L+ +YSKC   E A + F   
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTT 423

Query: 466 PELDIVCWNSMIAGLS-LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
              +IV WN M+     L++L  ++F  F+QM+   M P QF++ ++L +C  L + + G
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLS-DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
            Q+H  + K G+  +++V S LI+MY K G +  A +    +   + V+W  MI GY Q+
Sbjct: 483 EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQH 542

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
               EA++L+++M   G++ D+I F + ++AC+    +  G +I ++     G    L  
Sbjct: 543 DMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQI-HAQSYAAGFGADLSI 601

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
              +I    R G   EA +  +++  K++ + W  L+S
Sbjct: 602 NNALISLYARCGRIQEAYLAFEKIGDKNN-ISWNSLVS 638



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 254/547 (46%), Gaps = 82/547 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  +++ G   +T++CN L+ LYS+     SA+                       
Sbjct: 280 GEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAE----------------------- 316

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++F  M  R+ VS+N+LIS LV+ G  ++AL ++ KM  +   P  IT+AS+
Sbjct: 317 --------RIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASL 368

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  ++  +  G + H   IK G+  +I +  +LL LY+KC   + A   F      N 
Sbjct: 369 LSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENI 428

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +  M+    + D + ++ E+FR M  + +  +  +  S+L  C   G           
Sbjct: 429 VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYL------- 481

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+Q+H   IK GF+ ++++ + L+DMYAK G +  A  I   LPE  VVSW
Sbjct: 482 ---------GEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSW 532

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
             MIAGY Q    ++A++L + M+  G + D +   + + AC                  
Sbjct: 533 TAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYA 592

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             R G I+     F+ +   +  SWN+++S  +QS   +EA+++
Sbjct: 593 AGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQV 652

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F  M     + +  T    +S+ A++  ++ G+Q+H+  LKT    +  V++ LI +Y+K
Sbjct: 653 FVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAK 712

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
                 A R F+ + E +++ WN+MI G S +   +EA   F++M+   + P   +F  V
Sbjct: 713 SGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGV 772

Query: 512 LSSCAKL 518
           LS+C+ +
Sbjct: 773 LSACSHI 779



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 236/481 (49%), Gaps = 42/481 (8%)

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           ++HC   K GF+ +  L +SL+D Y ++GD   A  +F     RSV SWN MI  +  + 
Sbjct: 79  RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQK 138

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------------------- 349
            + +   L +RM + G  P+  T   +L ACV                            
Sbjct: 139 SNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVA 198

Query: 350 --------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                   ++G I++ +++F+ +    + +W AM+S  SQ+   +EAI LF +M    + 
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P    L+ +LS+   + + E G+Q+H   +K   H + YV +GL+ +YS+ ++   AER+
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F  +   D V +NS+I+GL        A   F +M+++ + P   + A++LS+CA + + 
Sbjct: 319 FSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGAL 378

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
            +G Q+H+   K G   DI +  +L+++Y KC D+  A +FF     +N V WN M+  Y
Sbjct: 379 HKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAY 438

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
            Q     ++  +++ M   G+ P+  T+ +IL  C+  G + +G +I   + +  G +  
Sbjct: 439 GQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHV-IKTGFQ-- 495

Query: 642 LDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           L+ Y C  +ID   + G    A  ++  +P +DD V W  +++    H     A +  EE
Sbjct: 496 LNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQHDMFSEALQLFEE 554

Query: 700 L 700
           +
Sbjct: 555 M 555



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 209/452 (46%), Gaps = 82/452 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH+H ++ G+  D  L   L++LYSKC +  +A   F     ++I  WN +L A  +
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQ 440

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D+L  ++++F                                +M  EG +P   T  S+
Sbjct: 441 LDNLSDSFEIF-------------------------------RQMQMEGMIPNQFTYPSI 469

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +  T+L  +  G + H  VIK G   N+YV + L+ +YAK G    A+ +   + E + 
Sbjct: 470 LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDV 529

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM++G  + D   EAL++F  M  + +  D++  +S +  CA    G+ +      
Sbjct: 530 VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACA----GIRAL----- 580

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    GQQ+H  +   GF ADL ++N+L+ +YA+ G +  A + F  + +++ +SW
Sbjct: 581 -------RQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISW 633

Query: 307 NVMIAGYGQKYQSTKAIELLQRM-----------------------------------KS 331
           N +++G  Q     +A+++  RM                                     
Sbjct: 634 NSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLK 693

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
            G++ +   S +++    +SG I      F+ M   +V SWNAM++ YSQ     EA++L
Sbjct: 694 TGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRL 753

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           F EM+  G+ P+  T   +LS+C+ +G+++ G
Sbjct: 754 FEEMKVCGIMPNHVTFVGVLSACSHIGLVKEG 785



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 205/425 (48%), Gaps = 57/425 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H+++ G   + ++C+ LI++Y+K      A  +  ++P  D+ SW A+++   +
Sbjct: 482 GEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQ 541

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D    A +LF+EM  R +                        +  N GF       AS 
Sbjct: 542 HDMFSEALQLFEEMEYRGI------------------------QFDNIGF-------ASA 570

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   +  +  G++ H      G   ++ + NAL+SLYA+CG  + A   FE++ + N 
Sbjct: 571 ISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNN 630

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ +++SGLA++    EAL++F  M+R    ++  +  S                 A S
Sbjct: 631 ISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGS-----------------AIS 673

Query: 247 DNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                 N+  GQQ+H + +K G++++  +SNSL+ +YAK+G +  A   F+++ ER+V+S
Sbjct: 674 AAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVIS 733

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI GY Q     +A+ L + MK CG  P+ VT + +L AC   G +K G + F+SM 
Sbjct: 734 WNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMF 793

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P    +  ++    ++     A++  +EM    +  D      +LS+C     +
Sbjct: 794 KIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMP---IPADAMIWRTLLSACVIHKNI 850

Query: 421 ESGKQ 425
           E G++
Sbjct: 851 EIGER 855



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 137/303 (45%), Gaps = 11/303 (3%)

Query: 378 SYSQSENHKEA-----IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           S+ Q+  H E      I+L   M+ RGV+ +      +L  C   G L    ++H    K
Sbjct: 27  SFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISK 86

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
           +    +  +   L+  Y +      A +VF       +  WN MI        + + F  
Sbjct: 87  SGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCL 146

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYC 551
           F++M    + P  ++FA VL +C     +F   +QVH++    G+ +   V + LI++Y 
Sbjct: 147 FRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYS 206

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           K G I  A++ F+ +  K+ VTW  MI G +QNG  +EA+ L+ DM AS + P      +
Sbjct: 207 KNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSS 266

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMP 669
           +L+A +   L ++G E  + + +  G     + Y C  ++    R+     AE +   M 
Sbjct: 267 VLSASTKIQLFELG-EQLHCLVIKWGFHS--ETYVCNGLVALYSRSRKLISAERIFSTMN 323

Query: 670 CKD 672
            +D
Sbjct: 324 SRD 326



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 1/176 (0%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++  +L  C    S F+  ++H +I K G+  +  +  +L++ Y + GD +GA + FD  
Sbjct: 60  NYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDEN 119

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++  +WN+MIH +       +   L++ M+A G+ P+  TF  +L AC    +    V
Sbjct: 120 SNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYV 179

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           +  +S    +G +        +ID   + G+   A+ + + + C  D V W  ++S
Sbjct: 180 KQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI-CMKDIVTWVAMIS 234


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 1058

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 254/791 (32%), Positives = 397/791 (50%), Gaps = 130/791 (16%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           D    N +I  YS+      A+ LFD    K+I +W  +L+   K   +E A ++F+ M 
Sbjct: 201 DVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMT 260

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
           ERNVVSWN +IS  V+NG  + A  ++++M                              
Sbjct: 261 ERNVVSWNAMISGYVQNGDLKNARKLFDEMP----------------------------- 291

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
                     +KN+   N++++ Y  C     A  +F++M E N V++  M+SG      
Sbjct: 292 ----------EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISD 341

Query: 202 VVEALEMF----RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
             EA ++F    R + R   SI  V LS++ G+   E  G                    
Sbjct: 342 YWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIG-------------------- 381

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
            +  + IK G+E D+ + +++L+ Y +NG +D A   F  +PER+  SW  MIA + Q  
Sbjct: 382 SLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCG 441

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
           +   AI+L +R+     E    T   M+ A  + G I+  R +FD + +P+V +WNA+++
Sbjct: 442 RLDDAIQLYERVP----EQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIA 497

Query: 378 SYSQS-------------------------------ENHKEAIKLFREMQFRGVKPDRTT 406
            Y+Q+                               E  +EA++L  E+   G  P  ++
Sbjct: 498 GYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSS 557

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
               LS+CA +G +E G+ +H+ ++KT    ++YV +GLI +Y+KC   E    VF  I 
Sbjct: 558 FTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIR 617

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY------------------------ 502
             D V WNS+I+GLS N +  +A + F++M + ++                         
Sbjct: 618 VKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLD 677

Query: 503 -------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
                  P Q +  ++LS+C  L +   G Q HA I K G+   +FVG++LI MY KCG 
Sbjct: 678 MLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGY 737

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
             G    F+ M   + +TWN ++ G AQNG G EA+++++ M   G+ PD ++F+ +L A
Sbjct: 738 EDGF-CVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCA 796

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           CSH+GLVD G   FNSM   +G+ P++ HYTCM+D LGRAG+  EAE LI+ MP K D V
Sbjct: 797 CSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSV 856

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMS 735
           IWE LL +CR+H NV L +R AE LF++    SA Y LL+N+++S G WD +  +R+LM 
Sbjct: 857 IWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMK 916

Query: 736 ENCIVKDPAYS 746
           +  + K+P  S
Sbjct: 917 DQGLTKEPGIS 927



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 222/501 (44%), Gaps = 100/501 (19%)

Query: 15  LRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAY 74
           ++ G   D  + + ++  Y++  +   A H F+ MP ++ YSW  +++A  +   L+ A 
Sbjct: 388 IKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAI 447

Query: 75  KLFDEMPER-------------------------------NVVSWNNLISALVRNGLEEK 103
           +L++ +PE+                               NVV+WN +I+   +NG+ ++
Sbjct: 448 QLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKE 507

Query: 104 ALSVYNKM----------------SNE---------------GFVPTHITLASVFKASTA 132
           A  ++ KM                 NE               G VP+  +  S   A   
Sbjct: 508 AKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACAN 567

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           + DVE GR  H L IK G   N YV N L+S+YAKCG  +    VF  +   + V++ ++
Sbjct: 568 IGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSL 627

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG-VESDVFAQSDNKFS 251
           +SGL++   + +A  +F  M ++    D VS ++++    + G G V  D+F    +  +
Sbjct: 628 ISGLSENYMLDDARVVFEKMPKR----DVVSWTAIISAYVQAGHGEVALDLFL---DMLA 680

Query: 252 RNVH---------------------GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           R +                      G+Q H L  KLGF+  L + NSL+ MY K G  D 
Sbjct: 681 RGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYEDG 740

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
              +F  +PE  +++WN ++ G  Q     +AI++ ++M+  G  PD+++ + +L AC  
Sbjct: 741 F-CVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSH 799

Query: 351 SGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           +G +  G   F+SM       P V  +  M+    ++    EA  L   M    VKPD  
Sbjct: 800 AGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMP---VKPDSV 856

Query: 406 TLAIILSSCAAMGILESGKQV 426
               +L +C     +E G++V
Sbjct: 857 IWEALLGACRIHRNVELGQRV 877



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 170/330 (51%), Gaps = 21/330 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H+  ++ G   ++++ N LI +Y+KC N     H+F  +  KD  SWN+++S   +
Sbjct: 574 GRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSE 633

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +  L+ A  +F++MP+R+VVSW  +ISA V+ G  E AL ++  M   G  P  +T+ S+
Sbjct: 634 NYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSL 693

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L  ++ G + H L+ K+G D  ++V N+L+++Y KCG+ +    VFEEM E + 
Sbjct: 694 LSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGY-EDGFCVFEEMPEHDL 752

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T+ A++ G A+     EA+++F  M  + +  D +S   VL  C+  G   E       
Sbjct: 753 ITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEG------ 806

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVS 305
                        + +T K G    ++    ++D+  + G +  AE +  N+P +   V 
Sbjct: 807 ---------WAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVI 857

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           W  ++       +  + +EL QR+    F+
Sbjct: 858 WEALLGA----CRIHRNVELGQRVAERLFQ 883



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 15/180 (8%)

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           +F  +  I+   + G +  AR+ F+ M  ++ V+WN MI+GY+QNG  DEA  L+   + 
Sbjct: 171 LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVG 230

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
             ++    T+  +LT  +  G ++   E+F SM      E  +  +  MI    + G   
Sbjct: 231 KNIR----TWTILLTGYAKEGRIEEAREVFESM-----TERNVVSWNAMISGYVQNGDLK 281

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYSLLANIY 718
            A  L DEMP K+      V+   C  +   R+++  A ELF   P +NS  + ++ + Y
Sbjct: 282 NARKLFDEMPEKNVASWNSVVTGYCHCY---RMSE--ARELFDQMPERNSVSWMVMISGY 336


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 253/779 (32%), Positives = 400/779 (51%), Gaps = 92/779 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HAH+L++GL       N L+  YSKC    SA+                       
Sbjct: 23  GAHIHAHLLKSGLLHA--FRNHLLSFYSKCRLPGSAR----------------------- 57

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++FDE P+   VSW++L++A   N L  +AL+ +  M   G       L  V
Sbjct: 58  --------RVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIV 109

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EPN 185
            K +    D   G + H + +  GL  +I+VANAL+++Y   G+   A  VF+E + + N
Sbjct: 110 LKCAP---DAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRN 166

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++  MMS   K DR  +A+E+F  M+   V  +    S V+  C              
Sbjct: 167 AVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTG------------ 214

Query: 246 SDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                SR++  G++VH + ++ G++ D+  +N+L+DMY+K GD+  A ++F  +P+  VV
Sbjct: 215 -----SRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVV 269

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN--------------------- 343
           SWN  I+G         A+ELL +MKS G  P+  T  +                     
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHG 329

Query: 344 -MLVACVRSGD---------------IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
            M+ AC  S D               +   R++F+ +P   +  WNA++S  S    H E
Sbjct: 330 FMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGE 389

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           ++ LF  M+  G   +RTTLA +L S A++  +    QVHA + K     D++V +GLI 
Sbjct: 390 SLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLID 449

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
            Y KC     A +VF      +I+ + SMI  LS      +A   F +M +  + P  F 
Sbjct: 450 SYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFV 509

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
            +++L++CA LS+  QG+QVHA + K  ++ D+F G+AL+  Y KCG I  A   F  + 
Sbjct: 510 LSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLP 569

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            K  V+W+ MI G AQ+G+G  A+ +++ M+   + P+ IT  ++L AC+H+GLVD    
Sbjct: 570 DKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKG 629

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F+SM+   G++   +HY+CMID LGRAG   +A  L++ MP + +  +W  LL++ R+H
Sbjct: 630 YFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVH 689

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +  L K AAE+LF L+P+ S  + LLAN Y+S G WD++  VR+LM ++ + K+PA S
Sbjct: 690 RDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMS 748



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 220/514 (42%), Gaps = 88/514 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +HA ++R G   D F  N L+++YSK  + H A  +F K+P  D+ SWNA      
Sbjct: 220 AGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNA------ 273

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                     IS  V +G ++ AL +  +M + G VP   TL+S
Sbjct: 274 -------------------------FISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSS 308

Query: 126 VFK--ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           + K  A         GR+ HG +IK   D + Y+  AL+ +YAK G    A  VFE +  
Sbjct: 309 ILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPR 368

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + + + A++SG +      E+L +F  M ++   I+  +L++VL   A         + 
Sbjct: 369 KDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTA--------SLE 420

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
           A SD          QVH L  K+GF +D H+ N L+D Y K   +  A  +F      ++
Sbjct: 421 AISDT--------TQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNI 472

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------- 348
           +++  MI    Q      AI+L   M   G EPD     ++L AC               
Sbjct: 473 IAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 532

Query: 349 --------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + G I+     F  +P   V SW+AM+   +Q  + K A
Sbjct: 533 LIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRA 592

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLI 446
           + +FR M    + P+  TL  +L +C   G+++  K  + +S+K    ID      S +I
Sbjct: 593 LDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKG-YFSSMKEMFGIDRTEEHYSCMI 651

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
            +  +  + + A  + + +P E +   W +++A 
Sbjct: 652 DLLGRAGKLDDAMELVNSMPFEANAAVWGALLAA 685



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 147/285 (51%), Gaps = 8/285 (2%)

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           +++ +L+  AA   L  G  +HA  LK+   + +   + L+  YSKC+    A RVF   
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSG--LLHAFRNHLLSFYSKCRLPGSARRVFDET 63

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
           P+   V W+S++   S N+L  EA   F+ MR   +   +F+   VL  CA    +  G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVL-KCA--PDAGLGV 120

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD-MMHGKNTVTWNEMIHGYAQN 584
           QVHA     G   DIFV +AL+ MY   G +  AR+ FD     +N V+WN M+  + +N
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
               +AV L+ +M+ SGV+P++  F  ++ AC+ S  ++ G ++ ++M +  G +  +  
Sbjct: 181 DRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKV-HAMVVRTGYDKDVFT 239

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
              ++D   + G  H A ++  ++P K D V W   +S C LH +
Sbjct: 240 ANALVDMYSKLGDIHMAALVFGKVP-KTDVVSWNAFISGCVLHGH 283


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/725 (33%), Positives = 392/725 (54%), Gaps = 53/725 (7%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N ++    K+  +E A K+F+ +  +++V+W  +IS L +NGLEE+A+ ++  M      
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           PT   L+SV  AST +   E G + H LVIK G     YV N L++LY++      A  +
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  M+  + V++ +++SGL +      ALE+F  M R  +  D ++++S+L  CA  G  
Sbjct: 319 FSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGA- 377

Query: 238 VESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                           +H G Q+H   IK G  AD+ L  SLLD+Y+K  D+++A   F 
Sbjct: 378 ----------------LHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFL 421

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD--- 353
                ++V WNVM+  YGQ    + + E+ ++M+  G  P++ T  ++L  C   G    
Sbjct: 422 XTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYL 481

Query: 354 --------IKTGREM------------------------FDSMPSPSVSSWNAMLSSYSQ 381
                   IKTG ++                           +P   V SW AM++ Y Q
Sbjct: 482 GEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQ 541

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
            +   EA++LF EM++RG++ D    A  +S+CA +  L  G+Q+HA S       D  +
Sbjct: 542 HDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSI 601

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + LI +Y++C R + A   F +I + + + WNS+++GL+ +    EA   F +M + E 
Sbjct: 602 NNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEA 661

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
               F++ + +S+ A L++  QG+Q+H+ + K GY ++  V ++LI +Y K G I  A +
Sbjct: 662 EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWR 721

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F+ M  +N ++WN MI GY+Q+G G EA+RL+++M   G+ P+ +TFV +L+ACSH GL
Sbjct: 722 EFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGL 781

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           V  G++ F SM   H + P  +HY C++D LGRAG    A   I EMP   D +IW  LL
Sbjct: 782 VKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLL 841

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           S+C +H N+ + +RAA  L  L+P++SA Y L++NIY+   +W      R+LM +  + K
Sbjct: 842 SACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKK 901

Query: 742 DPAYS 746
           +P  S
Sbjct: 902 EPGRS 906



 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 193/671 (28%), Positives = 333/671 (49%), Gaps = 54/671 (8%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           +  D   A K+FDE   R+V SWN +I   V      +   ++ +M  EG  P   T A 
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAG 164

Query: 126 VFKASTAL-LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           V KA     +   + ++ H      G D +  VAN L+ LY+K G+ + A  VF  +   
Sbjct: 165 VLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK 224

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + VT+ AM+SGL++     EA+ +F  M    +      LSSVL                
Sbjct: 225 DIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVL---------------- 268

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            +  K      G+Q+HCL IK GF ++ ++ N L+ +Y+++  + SAE IFS +  R  V
Sbjct: 269 SASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGV 328

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG------------ 352
           S+N +I+G  Q+  S +A+EL  +M+    +PD +T  ++L AC   G            
Sbjct: 329 SYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHA 388

Query: 353 -----------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                  D++T  + F    + ++  WN ML +Y Q +N  ++ 
Sbjct: 389 IKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSF 448

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           ++FR+MQ  G+ P++ T   IL +C ++G L  G+Q+H   +KT   ++ YV S LI +Y
Sbjct: 449 EIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMY 508

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +K  +  LA R+  R+PE D+V W +MIAG   + +  EA   F++M    +      FA
Sbjct: 509 AKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFA 568

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           + +S+CA + +  QG+Q+HAQ    G+  D+ + +ALI +Y +CG I  A   F+ +  K
Sbjct: 569 SAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDK 628

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           N ++WN ++ G AQ+GY +EA++++  M+ +  + +  T+ + ++A +    +  G +I 
Sbjct: 629 NNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQI- 687

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           +SM L  G +   +    +I    ++G   +A    ++M  + + + W  +++    H  
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVISWNAMITGYSQHGC 746

Query: 690 VRLAKRAAEEL 700
              A R  EE+
Sbjct: 747 GMEALRLFEEM 757



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 275/578 (47%), Gaps = 54/578 (9%)

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           R H  + K G D    + ++L+  Y + G    AV VF+E S  +  ++  M+       
Sbjct: 79  RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQK 138

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              +   +FR M+ + ++ +  + + VL  C               D  F+   + +QVH
Sbjct: 139 SNFQVFCLFRRMLAEGITPNGYTFAGVLKACV------------GGDIAFN---YVKQVH 183

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
             T   GF++   ++N L+D+Y+KNG ++SA+ +F+ +  + +V+W  MI+G  Q     
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243

Query: 321 KAIELLQRMKSCGFEP----------------------------------DEVTSINMLV 346
           +AI L   M +    P                                   E    N LV
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303

Query: 347 ACV-RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           A   RS  + +   +F +M S    S+N+++S   Q      A++LF +MQ   +KPD  
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T+A +LS+CA++G L  G Q+H+ ++K     D  +   L+ +YSKC   E A + F   
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXT 423

Query: 466 PELDIVCWNSMIAGLS-LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
              +IV WN M+     L++L  ++F  F+QM+   M P QF++ ++L +C  L + + G
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLS-DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
            Q+H  + K G+  +++V S LI+MY K G +  A +    +   + V+W  MI GY Q+
Sbjct: 483 EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQH 542

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
               EA++L+++M   G++ D+I F + ++AC+    +  G +I ++     G    L  
Sbjct: 543 DMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQI-HAQSYAAGFGADLSI 601

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
              +I    R G   EA +  +++  K++ + W  L+S
Sbjct: 602 NNALISLYARCGRIQEAYLAFEKIGDKNN-ISWNSLVS 638



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 254/547 (46%), Gaps = 82/547 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  +++ G   +T++CN L+ LYS+     SA+                       
Sbjct: 280 GEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAE----------------------- 316

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++F  M  R+ VS+N+LIS LV+ G  ++AL ++ KM  +   P  IT+AS+
Sbjct: 317 --------RIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASL 368

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  ++  +  G + H   IK G+  +I +  +LL LY+KC   + A   F      N 
Sbjct: 369 LSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENI 428

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +  M+    + D + ++ E+FR M  + +  +  +  S+L  C   G           
Sbjct: 429 VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYL------- 481

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+Q+H   IK GF+ ++++ + L+DMYAK G +  A  I   LPE  VVSW
Sbjct: 482 ---------GEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSW 532

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
             MIAGY Q    ++A++L + M+  G + D +   + + AC                  
Sbjct: 533 TAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYA 592

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             R G I+     F+ +   +  SWN+++S  +QS   +EA+++
Sbjct: 593 AGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQV 652

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F  M     + +  T    +S+ A++  ++ G+Q+H+  LKT    +  V++ LI +Y+K
Sbjct: 653 FVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAK 712

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
                 A R F+ + E +++ WN+MI G S +   +EA   F++M+   + P   +F  V
Sbjct: 713 SGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGV 772

Query: 512 LSSCAKL 518
           LS+C+ +
Sbjct: 773 LSACSHI 779



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 236/481 (49%), Gaps = 42/481 (8%)

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           ++HC   K GF+ +  L +SL+D Y ++GD   A  +F     RSV SWN MI  +  + 
Sbjct: 79  RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQK 138

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------------------- 349
            + +   L +RM + G  P+  T   +L ACV                            
Sbjct: 139 SNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVA 198

Query: 350 --------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                   ++G I++ +++F+ +    + +W AM+S  SQ+   +EAI LF +M    + 
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P    L+ +LS+   + + E G+Q+H   +K   H + YV +GL+ +YS+ ++   AER+
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F  +   D V +NS+I+GL        A   F +M+++ + P   + A++LS+CA + + 
Sbjct: 319 FSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGAL 378

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
            +G Q+H+   K G   DI +  +L+++Y KC D+  A +FF     +N V WN M+  Y
Sbjct: 379 HKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAY 438

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
            Q     ++  +++ M   G+ P+  T+ +IL  C+  G + +G +I   + +  G +  
Sbjct: 439 GQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHV-IKTGFQ-- 495

Query: 642 LDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           L+ Y C  +ID   + G    A  ++  +P +DD V W  +++    H     A +  EE
Sbjct: 496 LNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQHDMFSEALQLFEE 554

Query: 700 L 700
           +
Sbjct: 555 M 555



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 209/452 (46%), Gaps = 82/452 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH+H ++ G+  D  L   L++LYSKC +  +A   F     ++I  WN +L A  +
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQ 440

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D+L  ++++F                                +M  EG +P   T  S+
Sbjct: 441 LDNLSDSFEIF-------------------------------RQMQMEGMIPNQFTYPSI 469

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +  T+L  +  G + H  VIK G   N+YV + L+ +YAK G    A+ +   + E + 
Sbjct: 470 LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDV 529

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM++G  + D   EAL++F  M  + +  D++  +S +  CA    G+ +      
Sbjct: 530 VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACA----GIRA------ 579

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    GQQ+H  +   GF ADL ++N+L+ +YA+ G +  A + F  + +++ +SW
Sbjct: 580 ------LRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISW 633

Query: 307 NVMIAGYGQKYQSTKAIELLQRM-----------------------------------KS 331
           N +++G  Q     +A+++  RM                                     
Sbjct: 634 NSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLK 693

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
            G++ +   S +++    +SG I      F+ M   +V SWNAM++ YSQ     EA++L
Sbjct: 694 TGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRL 753

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           F EM+  G+ P+  T   +LS+C+ +G+++ G
Sbjct: 754 FEEMKVCGIMPNHVTFVGVLSACSHIGLVKEG 785



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 205/425 (48%), Gaps = 57/425 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H+++ G   + ++C+ LI++Y+K      A  +  ++P  D+ SW A+++   +
Sbjct: 482 GEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQ 541

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D    A +LF+EM  R +                        +  N GF       AS 
Sbjct: 542 HDMFSEALQLFEEMEYRGI------------------------QFDNIGF-------ASA 570

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   +  +  G++ H      G   ++ + NAL+SLYA+CG  + A   FE++ + N 
Sbjct: 571 ISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNN 630

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ +++SGLA++    EAL++F  M+R    ++  +  S                 A S
Sbjct: 631 ISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGS-----------------AIS 673

Query: 247 DNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                 N+  GQQ+H + +K G++++  +SNSL+ +YAK+G +  A   F+++ ER+V+S
Sbjct: 674 AAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVIS 733

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI GY Q     +A+ L + MK CG  P+ VT + +L AC   G +K G + F+SM 
Sbjct: 734 WNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMF 793

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P    +  ++    ++     A++  +EM    +  D      +LS+C     +
Sbjct: 794 KIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMP---IPADAMIWRTLLSACVIHKNI 850

Query: 421 ESGKQ 425
           E G++
Sbjct: 851 EIGER 855



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 137/303 (45%), Gaps = 11/303 (3%)

Query: 378 SYSQSENHKEA-----IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           S+ Q+  H E      I+L   M+ RGV+ +      +L  C   G L    ++H    K
Sbjct: 27  SFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISK 86

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
           +    +  +   L+  Y +      A +VF       +  WN MI        + + F  
Sbjct: 87  SGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCL 146

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYC 551
           F++M    + P  ++FA VL +C     +F   +QVH++    G+ +   V + LI++Y 
Sbjct: 147 FRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYS 206

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           K G I  A++ F+ +  K+ VTW  MI G +QNG  +EA+ L+ DM AS + P      +
Sbjct: 207 KNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSS 266

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMP 669
           +L+A +   L ++G E  + + +  G     + Y C  ++    R+     AE +   M 
Sbjct: 267 VLSASTKIQLFELG-EQLHCLVIKWGFHS--ETYVCNGLVALYSRSRKLISAERIFSTMN 323

Query: 670 CKD 672
            +D
Sbjct: 324 SRD 326



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 1/176 (0%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++  +L  C    S F+  ++H +I K G+  +  +  +L++ Y + GD +GA + FD  
Sbjct: 60  NYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDEN 119

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++  +WN+MIH +       +   L++ M+A G+ P+  TF  +L AC    +    V
Sbjct: 120 SNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYV 179

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           +  +S    +G +        +ID   + G+   A+ + + + C  D V W  ++S
Sbjct: 180 KQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI-CMKDIVTWVAMIS 234


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/772 (31%), Positives = 397/772 (51%), Gaps = 82/772 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA IL  GL D T +CN LI+LYS+      A+ +FD +  KD                
Sbjct: 169 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD---------------- 212

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                            SW  +IS L +N  E +A+ ++  M   G +PT    +SV  A
Sbjct: 213 ---------------HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 257

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              +  +E G + HGLV+K+G   + YV NAL+SLY   G    A  +F  MS+ + VT+
Sbjct: 258 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 317

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             +++GL++     +A+E+F+ M    +  DS +L+S++  C+ +G      +F      
Sbjct: 318 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT-----LF------ 366

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 GQQ+H  T KLGF ++  +  +LL++YAK  D+++A   F      +VV WNVM
Sbjct: 367 -----RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 421

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM----- 364
           +  YG       +  + ++M+     P++ T  ++L  C+R GD++ G ++   +     
Sbjct: 422 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 481

Query: 365 ------------------------------PSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                             V SW  M++ Y+Q     +A+  FR+
Sbjct: 482 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 541

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M  RG++ D   L   +S+CA +  L+ G+Q+HA +  +    D    + L+ +YS+C +
Sbjct: 542 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 601

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E +   F +    D + WN++++G   +  + EA   F +M +  +    F+F + + +
Sbjct: 602 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 661

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
            ++ ++  QG+QVHA I K GY ++  V +ALI MY KCG I  A + F  +  KN V+W
Sbjct: 662 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 721

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I+ Y+++G+G EA+  +  MI S V+P+ +T V +L+ACSH GLVD G+  F SM  
Sbjct: 722 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 781

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           ++G+ P  +HY C++D L RAG    A+  I EMP K D ++W  LLS+C +H N+ + +
Sbjct: 782 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 841

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA  L  L+P++SA Y LL+N+Y+   +WD     R+ M E  + K+P  S
Sbjct: 842 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 893



 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 199/721 (27%), Positives = 344/721 (47%), Gaps = 91/721 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH+ IL+ GL  +  L  +L + Y           LF                    
Sbjct: 64  GRKLHSQILKLGLDSNGCLSEKLFDFY-----------LF-------------------- 92

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             DL  A+K+FDEMPER + +WN +I  L    L  +   ++ +M +E   P   T + V
Sbjct: 93  KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 152

Query: 127 FKA----STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            +A    S A   VE   + H  ++  GL  +  V N L+ LY++ G+   A  VF+ + 
Sbjct: 153 LEACRGGSVAFDVVE---QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 209

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             +  ++ AM+SGL+K +   EA+ +F  M    +     + SSVL  C +    +ES  
Sbjct: 210 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKK----IESLE 265

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+Q+H L +KLGF +D ++ N+L+ +Y   G++ SAE IFSN+ +R 
Sbjct: 266 I------------GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 313

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG---------- 352
            V++N +I G  Q     KA+EL +RM   G EPD  T  +++VAC   G          
Sbjct: 314 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 373

Query: 353 -------------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                    DI+T  + F      +V  WN ML +Y   ++ + 
Sbjct: 374 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 433

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           + ++FR+MQ   + P++ T   IL +C  +G LE G+Q+H+  +KT   ++ YV S LI 
Sbjct: 434 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 493

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+K  + + A  +  R    D+V W +MIAG +  + D +A   F+QM    +   +  
Sbjct: 494 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 553

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
               +S+CA L +  +G+Q+HAQ    G+ +D+   +AL+ +Y +CG I  +   F+   
Sbjct: 554 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 613

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
             + + WN ++ G+ Q+G  +EA+R++  M   G+  ++ TF + + A S +  +  G +
Sbjct: 614 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 673

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           + +++    G +   +    +I    + G   +AE    E+  K++ V W  ++++   H
Sbjct: 674 V-HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKH 731

Query: 688 A 688
            
Sbjct: 732 G 732



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/625 (25%), Positives = 279/625 (44%), Gaps = 57/625 (9%)

Query: 109 NKMSNEGFVPTHITLASVFKA---STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
           + + N G  P H TL  + +    +   LD   GR+ H  ++K+GLD N  ++  L   Y
Sbjct: 33  DSVENRGIRPNHQTLKWLLEGCLKTNGSLD--EGRKLHSQILKLGLDSNGCLSEKLFDFY 90

Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
              G    A  VF+EM E    T+  M+  LA  + + E   +F  M+ + V+ +  + S
Sbjct: 91  LFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 150

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
            VL  C   G  V  DV              +Q+H   +  G      + N L+D+Y++N
Sbjct: 151 GVLEAC--RGGSVAFDVV-------------EQIHARILYQGLRDSTVVCNPLIDLYSRN 195

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
           G +D A  +F  L  +   SW  MI+G  +     +AI L   M   G  P      ++L
Sbjct: 196 GFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 255

Query: 346 VACVRSGDIKTGREM-----------------------------------FDSMPSPSVS 370
            AC +   ++ G ++                                   F +M      
Sbjct: 256 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 315

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           ++N +++  SQ    ++A++LF+ M   G++PD  TLA ++ +C+A G L  G+Q+HA +
Sbjct: 316 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 375

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
            K     +N +   L+ +Y+KC   E A   F      ++V WN M+    L      +F
Sbjct: 376 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 435

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             F+QM+  E+ P Q+++ ++L +C +L     G Q+H+QI K  +  + +V S LI+MY
Sbjct: 436 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 495

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            K G +  A        GK+ V+W  MI GY Q  + D+A+  ++ M+  G++ D++   
Sbjct: 496 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 555

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
             ++AC+    +  G +I ++     G    L     ++    R G   E+ +  ++   
Sbjct: 556 NAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 614

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKR 695
            D+ + W  L+S  +   N   A R
Sbjct: 615 GDN-IAWNALVSGFQQSGNNEEALR 638



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 178/358 (49%), Gaps = 19/358 (5%)

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           GD+    ++FD MP  ++ +WN M+   +      E   LF  M    V P+  T + +L
Sbjct: 94  GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 153

Query: 412 SSCAAMGI-LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
            +C    +  +  +Q+HA  L         V + LI +YS+    +LA RVF  +   D 
Sbjct: 154 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 213

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
             W +MI+GLS N  + EA   F  M    + PT ++F++VLS+C K+ S   G Q+H  
Sbjct: 214 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 273

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + K G+ +D +V +AL+ +Y   G++  A   F  M  ++ VT+N +I+G +Q GYG++A
Sbjct: 274 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 333

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI--------FNSMQLDHGVEPIL 642
           + L+K M   G++PD  T  +++ ACS  G +  G ++        F S     G   +L
Sbjct: 334 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA--LL 391

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
           + Y    D      +F E E+        ++ V+W V+L +  L  ++R + R   ++
Sbjct: 392 NLYAKCADIETALDYFLETEV--------ENVVLWNVMLVAYGLLDDLRNSFRIFRQM 441



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 31/229 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA    +G   D    N L+ LYS+C     +   F++    D  +WNA       
Sbjct: 570 GQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNA------- 622

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   L+S   ++G  E+AL V+ +M+ EG    + T  S 
Sbjct: 623 ------------------------LVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 658

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA++   +++ G++ H ++ K G D    V NAL+S+YAKCG    A   F E+S  NE
Sbjct: 659 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 718

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           V++ A+++  +K     EAL+ F  MI   V  + V+L  VL  C+  G
Sbjct: 719 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 767



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 5/117 (4%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA I + G   +T +CN LI +Y+KC +   A+  F ++  K+  SWNAI++A  K
Sbjct: 671 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 730

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE-GFVP 118
                 A   FD+M   NV    V+   ++SA    GL +K ++ +  M++E G  P
Sbjct: 731 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 787


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 241/772 (31%), Positives = 397/772 (51%), Gaps = 82/772 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA IL  GL D T +CN LI+LYS+      A+ +FD +  KD                
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD---------------- 252

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                            SW  +IS L +N  E +A+ ++  M   G +PT    +SV  A
Sbjct: 253 ---------------HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              +  +E G + HGLV+K+G   + YV NAL+SLY   G    A  +F  MS+ + VT+
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             +++GL++     +A+E+F+ M    +  DS +L+S++  C+ +G      +F      
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT-----LF------ 406

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 GQQ+H  T KLGF ++  +  +LL++YAK  D+++A   F      +VV WNVM
Sbjct: 407 -----RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 461

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM----- 364
           +  YG       +  + ++M+     P++ T  ++L  C+R GD++ G ++   +     
Sbjct: 462 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 521

Query: 365 ------------------------------PSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                             V SW  M++ Y+Q     +A+  FR+
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M  RG++ D   L   +S+CA +  L+ G+Q+HA +  +    D    + L+ +YS+C +
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E +   F +    D + WN++++G   +  + EA   F +M +  +    F+F + + +
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
            ++ ++  QG+QVHA I K GY ++  V +ALI MY KCG I  A + F  +  KN V+W
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 761

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I+ Y+++G+G EA+  +  MI S V+P+ +T V +L+ACSH GLVD G+  F SM  
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           ++G+ P  +HY C++D L RAG    A+  I EMP K D ++W  LLS+C +H N+ + +
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA  L  L+P++SA Y LL+N+Y+   +WD     R+ M E  + K+P  S
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 933



 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 199/721 (27%), Positives = 344/721 (47%), Gaps = 91/721 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH+ IL+ GL  +  L  +L + Y           LF                    
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFY-----------LF-------------------- 132

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             DL  A+K+FDEMPER + +WN +I  L    L  +   ++ +M +E   P   T + V
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192

Query: 127 FKA----STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            +A    S A   VE   + H  ++  GL  +  V N L+ LY++ G+   A  VF+ + 
Sbjct: 193 LEACRGGSVAFDVVE---QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             +  ++ AM+SGL+K +   EA+ +F  M    +     + SSVL  C +    +ES  
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKK----IESLE 305

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+Q+H L +KLGF +D ++ N+L+ +Y   G++ SAE IFSN+ +R 
Sbjct: 306 I------------GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG---------- 352
            V++N +I G  Q     KA+EL +RM   G EPD  T  +++VAC   G          
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413

Query: 353 -------------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                    DI+T  + F      +V  WN ML +Y   ++ + 
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           + ++FR+MQ   + P++ T   IL +C  +G LE G+Q+H+  +KT   ++ YV S LI 
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+K  + + A  +  R    D+V W +MIAG +  + D +A   F+QM    +   +  
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
               +S+CA L +  +G+Q+HAQ    G+ +D+   +AL+ +Y +CG I  +   F+   
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
             + + WN ++ G+ Q+G  +EA+R++  M   G+  ++ TF + + A S +  +  G +
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           + +++    G +   +    +I    + G   +AE    E+  K++ V W  ++++   H
Sbjct: 714 V-HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKH 771

Query: 688 A 688
            
Sbjct: 772 G 772



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/625 (25%), Positives = 279/625 (44%), Gaps = 57/625 (9%)

Query: 109 NKMSNEGFVPTHITLASVFKA---STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
           + + N G  P H TL  + +    +   LD   GR+ H  ++K+GLD N  ++  L   Y
Sbjct: 73  DSVENRGIRPNHQTLKWLLEGCLKTNGSLD--EGRKLHSQILKLGLDSNGCLSEKLFDFY 130

Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
              G    A  VF+EM E    T+  M+  LA  + + E   +F  M+ + V+ +  + S
Sbjct: 131 LFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 190

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
            VL  C   G  V  DV              +Q+H   +  G      + N L+D+Y++N
Sbjct: 191 GVLEAC--RGGSVAFDVV-------------EQIHARILYQGLRDSTVVCNPLIDLYSRN 235

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
           G +D A  +F  L  +   SW  MI+G  +     +AI L   M   G  P      ++L
Sbjct: 236 GFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 295

Query: 346 VACVRSGDIKTGREM-----------------------------------FDSMPSPSVS 370
            AC +   ++ G ++                                   F +M      
Sbjct: 296 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           ++N +++  SQ    ++A++LF+ M   G++PD  TLA ++ +C+A G L  G+Q+HA +
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 415

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
            K     +N +   L+ +Y+KC   E A   F      ++V WN M+    L      +F
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             F+QM+  E+ P Q+++ ++L +C +L     G Q+H+QI K  +  + +V S LI+MY
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            K G +  A        GK+ V+W  MI GY Q  + D+A+  ++ M+  G++ D++   
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 595

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
             ++AC+    +  G +I ++     G    L     ++    R G   E+ +  ++   
Sbjct: 596 NAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKR 695
            D+ + W  L+S  +   N   A R
Sbjct: 655 GDN-IAWNALVSGFQQSGNNEEALR 678



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 178/358 (49%), Gaps = 19/358 (5%)

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           GD+    ++FD MP  ++ +WN M+   +      E   LF  M    V P+  T + +L
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193

Query: 412 SSCAAMGI-LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
            +C    +  +  +Q+HA  L         V + LI +YS+    +LA RVF  +   D 
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
             W +MI+GLS N  + EA   F  M    + PT ++F++VLS+C K+ S   G Q+H  
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + K G+ +D +V +AL+ +Y   G++  A   F  M  ++ VT+N +I+G +Q GYG++A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI--------FNSMQLDHGVEPIL 642
           + L+K M   G++PD  T  +++ ACS  G +  G ++        F S     G   +L
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA--LL 431

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
           + Y    D      +F E E+        ++ V+W V+L +  L  ++R + R   ++
Sbjct: 432 NLYAKCADIETALDYFLETEV--------ENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 31/229 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA    +G   D    N L+ LYS+C     +   F++    D  +WNA       
Sbjct: 610 GQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNA------- 662

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   L+S   ++G  E+AL V+ +M+ EG    + T  S 
Sbjct: 663 ------------------------LVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 698

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA++   +++ G++ H ++ K G D    V NAL+S+YAKCG    A   F E+S  NE
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 758

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           V++ A+++  +K     EAL+ F  MI   V  + V+L  VL  C+  G
Sbjct: 759 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 807



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 5/117 (4%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA I + G   +T +CN LI +Y+KC +   A+  F ++  K+  SWNAI++A  K
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE-GFVP 118
                 A   FD+M   NV    V+   ++SA    GL +K ++ +  M++E G  P
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 827


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 253/773 (32%), Positives = 392/773 (50%), Gaps = 84/773 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA  +  GL  D  + N LI+LY+K                 +   W A          
Sbjct: 65  IHATSVVRGLGADRLIGNLLIDLYAK-----------------NGLVWQA---------- 97

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                ++F E+  R+ VSW  ++S   ++GL ++A  +Y++M     +PT   L+SV  A
Sbjct: 98  ----RQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSA 153

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            T       GR  H  V K       +V NAL++LY   G  K A  VF +M   + VTF
Sbjct: 154 CTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTF 213

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             ++SG A+      AL++F  M    +  D V+++S+L  CA  G     D+       
Sbjct: 214 NTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVG-----DL------- 261

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVSWNV 308
                 G+Q+H   +K G   D     SLLD+Y K GD+++A  IF NL +R+ VV WN+
Sbjct: 262 ----QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWNL 316

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG----------- 357
           M+  YGQ     K+ E+  +M++ G  P++ T   +L  C  +G I+ G           
Sbjct: 317 MLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNG 376

Query: 358 ------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                   R++ + +    V SW +M++ Y Q +  +EA+  F+
Sbjct: 377 FESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFK 436

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           EMQ  GV PD   LA   S+CA +  +  G Q+HA    +    D  + + L+ +Y++C 
Sbjct: 437 EMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCG 496

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
           R+E A  +F  I   D + WN +I+G   + L  +A M F +M Q       F+F + +S
Sbjct: 497 RSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAIS 556

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           + A L+   QG+QVH +  K G+ ++  V +ALI +Y KCG I  A+  F  M  +N V+
Sbjct: 557 ALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVS 616

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN +I   +Q+G G EA+ L+  M   G+KP+D+TF+ +L ACSH GLV+ G+  F SM 
Sbjct: 617 WNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMS 676

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
             +G+ PI DHY C++D LGRAG    A   +DEMP   + +IW  LLS+C++H N+ + 
Sbjct: 677 NVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIG 736

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + AA+ L  L+P +SA Y LL+N Y+  G+W +   VR++M +  I K+P  S
Sbjct: 737 ELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRS 789



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 161/613 (26%), Positives = 277/613 (45%), Gaps = 87/613 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K    G+++HA + +     +TF+ N LI LY    +   A+ +F  M   D  ++N ++
Sbjct: 158 KLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLI 217

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           S   +    E A ++FDEM                             ++S  G  P  +
Sbjct: 218 SGHAQCGHGECALQIFDEM-----------------------------QLS--GLRPDCV 246

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+AS+  A  ++ D++ G++ H  ++K G+  +     +LL LY KCG  + A  +F   
Sbjct: 247 TVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLG 306

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              N V +  M+    +   + ++ E+F  M    +  +  +   +L  C    C  + +
Sbjct: 307 DRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCT---CTGQIE 363

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           +             G+Q+H L+IK GFE+D+++S  L+DMY+K G +D A  I   L +R
Sbjct: 364 L-------------GEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKR 410

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----VRSG---- 352
            VVSW  MIAGY Q     +A+   + M+ CG  PD +   +   AC     +R G    
Sbjct: 411 DVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIH 470

Query: 353 ----------DI-----------KTGR-----EMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                     DI           + GR      +F  +      +WN ++S + QS  +K
Sbjct: 471 ARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYK 530

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           +A+ +F +M   G K +  T    +S+ A +  ++ GKQVH  ++KT    +  VA+ LI
Sbjct: 531 QALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALI 590

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y KC   E A+ +F  +   + V WN++I   S +   +EA   F QM+Q  + P   
Sbjct: 591 SLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDV 650

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDM 565
           +F  VL++C+ +    +G      +     +N I    A ++++  + G +  AR+F D 
Sbjct: 651 TFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDE 710

Query: 566 MHGKNTVTWNEMI 578
           M     +T N MI
Sbjct: 711 M----PITANAMI 719



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 244/513 (47%), Gaps = 43/513 (8%)

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           ++H  ++  G  AD  + N L+D+YAKNG +  A  +F  L  R  VSW  M++GY Q  
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS-------------------------- 351
              +A  L  +M      P      ++L AC +                           
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 352 ---------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                    G  K    +F  M      ++N ++S ++Q  + + A+++F EMQ  G++P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  T+A +L++CA++G L+ GKQ+H+  LK     D      L+ +Y KC   E A  +F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
           +     ++V WN M+      S   ++F  F QM+   ++P QF++  +L +C       
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIE 363

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G Q+H+   K+G+ +D++V   LI+MY K G +  AR+  +M+  ++ V+W  MI GY 
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYV 423

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           Q+ + +EA+  +K+M   GV PD+I   +  +AC+    +  G++I   + +  G    +
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVS-GYAADI 482

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
             +  +++   R G   EA  L  E+  KD+ + W  L+S        RL K+A     +
Sbjct: 483 SIWNTLVNLYARCGRSEEAFSLFREIEHKDE-ITWNGLISG---FGQSRLYKQALMVFMK 538

Query: 703 LDPKNSAPYSLLANI--YSSLGRWDDLRAVREL 733
           +  +  A Y++   I   S+L    D++  +++
Sbjct: 539 MG-QAGAKYNVFTFISAISALANLADIKQGKQV 570


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 253/773 (32%), Positives = 391/773 (50%), Gaps = 84/773 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA  +  GL  D  + N LI+LY+K                 +   W A          
Sbjct: 65  IHATSVVRGLGADRLIGNLLIDLYAK-----------------NGLVWQA---------- 97

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                ++F E+  R+ VSW  ++S   + GL ++A  +Y++M     +PT   L+SV  A
Sbjct: 98  ----RQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSA 153

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            T       GR  H  V K       +V NAL++LY   G  K A  VF +M   + VTF
Sbjct: 154 CTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTF 213

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             ++SG A+      AL++F  M    +  D V+++S+L  CA  G     D+       
Sbjct: 214 NTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVG-----DL------- 261

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVSWNV 308
                 G+Q+H   +K G   D     SLLD+Y K GD+++A  IF NL +R+ VV WN+
Sbjct: 262 ----QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWNL 316

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG----------- 357
           M+  YGQ     K+ E+  +M++ G  P++ T   +L  C  +G I+ G           
Sbjct: 317 MLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNG 376

Query: 358 ------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                   R++ + +    V SW +M++ Y Q +  +EA+  F+
Sbjct: 377 FESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFK 436

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           EMQ  GV PD   LA   S+CA +  +  G Q+HA    +    D  + + L+ +Y++C 
Sbjct: 437 EMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCG 496

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
           R+E A  +F  I   D + WN +I+G   + L  +A M F +M Q       F+F + +S
Sbjct: 497 RSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAIS 556

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           + A L+   QG+QVH +  K G+ ++  V +ALI +Y KCG I  A+  F  M  +N V+
Sbjct: 557 ALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVS 616

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN +I   +Q+G G EA+ L+  M   G+KP+D+TF+ +L ACSH GLV+ G+  F SM 
Sbjct: 617 WNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMS 676

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
             +G+ PI DHY C++D LGRAG    A   +DEMP   + +IW  LLS+C++H N+ + 
Sbjct: 677 NVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIG 736

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + AA+ L  L+P +SA Y LL+N Y+  G+W +   VR++M +  I K+P  S
Sbjct: 737 ELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRS 789



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 159/613 (25%), Positives = 276/613 (45%), Gaps = 87/613 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K    G+++HA + +     +TF+ N LI LY    +   A+ +F  M   D  ++N ++
Sbjct: 158 KLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLI 217

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           S   +    E A ++FDEM                             ++S  G  P  +
Sbjct: 218 SGHAQCGHGECALQIFDEM-----------------------------QLS--GLRPDCV 246

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+AS+  A  ++ D++ G++ H  ++K G+  +     +LL LY KCG  + A  +F   
Sbjct: 247 TVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLG 306

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              N V +  M+    +   + ++ E+F  M    +  +  +   +L  C    C  + +
Sbjct: 307 DRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCT---CTGQIE 363

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           +             G+Q+H L+IK GFE+D+++S  L+DMY+K   +D A  I   L +R
Sbjct: 364 L-------------GEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKR 410

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----VRSG---- 352
            VVSW  MIAGY Q     +A+   + M+ CG  PD +   +   AC     +R G    
Sbjct: 411 DVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIH 470

Query: 353 ----------DI-----------KTGR-----EMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                     DI           + GR      +F  +      +WN ++S + QS  ++
Sbjct: 471 ARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYE 530

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           +A+ +F +M   G K +  T    +S+ A +  ++ GKQVH  ++KT    +  VA+ LI
Sbjct: 531 QALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALI 590

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y KC   E A+ +F  +   + V WN++I   S +   +EA   F QM+Q  + P   
Sbjct: 591 SLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDV 650

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDM 565
           +F  VL++C+ +    +G      +     +N I    A ++++  + G +  AR+F D 
Sbjct: 651 TFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDE 710

Query: 566 MHGKNTVTWNEMI 578
           M     +T N MI
Sbjct: 711 M----PITANAMI 719



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 222/460 (48%), Gaps = 37/460 (8%)

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           ++H  ++  G  AD  + N L+D+YAKNG +  A  +F  L  R  VSW  M++GY Q+ 
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS-------------------------- 351
              +A  L  +M      P      ++L AC +                           
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 352 ---------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                    G  K    +F  M      ++N ++S ++Q  + + A+++F EMQ  G++P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  T+A +L++CA++G L+ GKQ+H+  LK     D      L+ +Y KC   E A  +F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
           +     ++V WN M+      S   ++F  F QM+   ++P +F++  +L +C       
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIE 363

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G Q+H+   K+G+ +D++V   LI+MY K   +  AR+  +M+  ++ V+W  MI GY 
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYV 423

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           Q+ + +EA+  +K+M   GV PD+I   +  +AC+    +  G++I   + +  G    +
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVS-GYAADI 482

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
             +  +++   R G   EA  L  E+  KD+ + W  L+S
Sbjct: 483 SIWNTLVNLYARCGRSEEAFSLFREIDHKDE-ITWNGLIS 521


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 254/791 (32%), Positives = 402/791 (50%), Gaps = 97/791 (12%)

Query: 1   KKAHVAGKLLHA-----HILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIY 55
           K  HV G+ +HA     H LRN    D  L  R+I +YS C +   ++ +FD    KD++
Sbjct: 106 KNIHV-GRKVHALVSASHKLRN----DVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLF 160

Query: 56  SWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNE 114
            +                               N L+S   RN L   A+S++ ++ S  
Sbjct: 161 LY-------------------------------NALLSGYSRNALFRDAISLFLELLSAT 189

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
              P + TL  V KA   + DVE G   H L +K G   + +V NAL+++Y KCG+ + A
Sbjct: 190 DLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESA 249

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSI--DSVSLSSVLGVC 231
           V VFE M   N V++ ++M   ++     E   +F RL+I +   +  D  ++ +V+  C
Sbjct: 250 VKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPAC 309

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A  G                    G  VH L  KLG   ++ ++NSL+DMY+K G +  A
Sbjct: 310 AAVG----------------EVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEA 353

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVAC-- 348
             +F     ++VVSWN +I GY ++       ELLQ M +      +EVT +N+L AC  
Sbjct: 354 RALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSG 413

Query: 349 --------------VRSGDIK-------------------TGREMFDSMPSPSVSSWNAM 375
                          R G +K                       +F  M   +VSSWNA+
Sbjct: 414 EHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNAL 473

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           + +++Q+    +++ LF  M   G+ PDR T+  +L +CA +  L  GK++H   L+   
Sbjct: 474 IGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGL 533

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
            +D ++   L+ +Y +C    L + +F ++    +VCWN MI G S N L  EA   F+Q
Sbjct: 534 ELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQ 593

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M    + P + +   VL +C+++S+   G++VH+   K     D FV  ALI+MY KCG 
Sbjct: 594 MLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGC 653

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  ++  FD ++ K+   WN +I GY  +G+G +A+ L++ M   G +PD  TF+ +L A
Sbjct: 654 MEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIA 713

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           C+H+GLV  G++    MQ  +GV+P L+HY C++D LGRAG   EA  L++EMP + D  
Sbjct: 714 CNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSG 773

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMS 735
           IW  LLSSCR + ++ + +  +++L  L+P  +  Y LL+N+Y+ LG+WD++R VR+ M 
Sbjct: 774 IWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMK 833

Query: 736 ENCIVKDPAYS 746
           EN + KD   S
Sbjct: 834 ENGLHKDAGCS 844


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 255/787 (32%), Positives = 401/787 (50%), Gaps = 90/787 (11%)

Query: 1   KKAHVAGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           KKA   G  +HAH +  G    DD FL  +L+ +Y KC     A+ LFD M         
Sbjct: 71  KKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMS-------- 122

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM---SNEG 115
                                   R V SWN LI A + +G   +AL VY  M   +  G
Sbjct: 123 -----------------------SRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASG 159

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
             P   TLASV KAS    D   G   HGL +K GLD++ +VANAL+++YAKCG    A+
Sbjct: 160 VAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAM 219

Query: 176 PVFEEMSEPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
            VFE M +  +V ++ +M+SG  +    ++AL++FR M R  +S++S +   VL VC   
Sbjct: 220 RVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTE- 278

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
                    AQ +        G+++H   +K G E ++   N+LL MY K G +DSA  +
Sbjct: 279 --------LAQLN-------LGRELHAALLKSGSEVNIQ-CNALLVMYTKCGRVDSALRV 322

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  + E+  +SWN M++ Y Q     +AIE +  M   GF+PD    +++  A    G +
Sbjct: 323 FREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWL 382

Query: 355 KTGREM-----------------------------------FDSMPSPSVSSWNAMLSSY 379
             G+E+                                   FD M      SW  +++ Y
Sbjct: 383 LNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCY 442

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           +QS  H EA+++FRE Q  G+K D   +  IL +C+ +  +   KQ+H  +++    +D 
Sbjct: 443 AQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDL 501

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            V + +I IY +C     + ++F  + + DIV W SMI   + + L  EA + F +M+  
Sbjct: 502 VVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQST 561

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
           ++ P   +  ++L +   LSS  +G++VH  + +  +  +  + S+L++MY  CG + GA
Sbjct: 562 DVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGA 621

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
            + F+ +  K+ V W  MI+    +G+G +A+ L+K M+ +GV PD ++F+A+L ACSHS
Sbjct: 622 LKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHS 681

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
            LV+ G    + M   + +EP  +HY C++D LGR+G   EA   I  MP K   V+W  
Sbjct: 682 KLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCS 741

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL +CR+H N  LA  AA  L  L+P N   Y L++N+++ +G+W++ + VR  +SE  +
Sbjct: 742 LLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGL 801

Query: 740 VKDPAYS 746
            KDPA S
Sbjct: 802 RKDPACS 808



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV--NDIFVGSALIEMYCKCGDIYGAR 560
           P Q  +  VL   A   +  QG QVHA     G +  +D F+ + L+ MY KCG +  AR
Sbjct: 56  PPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADAR 115

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM---IASGVKPDDITFVAILTACS 617
             FD M  +   +WN +I  Y  +G   EA+ +Y+ M    ASGV PD  T  ++L A  
Sbjct: 116 LLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASG 175

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
             G    G E+ + + + HG++        +I    + G    A  + + M    D   W
Sbjct: 176 VEGDGRCGCEV-HGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASW 234

Query: 678 EVLLSSC 684
             ++S C
Sbjct: 235 NSMISGC 241


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/777 (30%), Positives = 416/777 (53%), Gaps = 88/777 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCN-RLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ L   +  +  F   F+ N RLI +YS C     ++ +FD++ +K+++ WNA      
Sbjct: 126 GRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNA------ 179

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLA 124
                                    L+S  VRN L ++A+  + ++ S   F P + T  
Sbjct: 180 -------------------------LVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFP 214

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            + KA T   D+  G+  HG+ +K+GL  +++V NA+++LY KCG+   AV +F++M E 
Sbjct: 215 CLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQ 274

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI--DSVSLSSVLGVCAREGCGVESDV 242
           N +++ +++ G ++    +EA   FR ++     +  D  ++ ++L VC+ EG     DV
Sbjct: 275 NLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEG---NVDV 331

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G  +H + +KLG   +L + N+L+DMY+K G +  A ++F  +  +S
Sbjct: 332 -------------GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKS 378

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQR--MKSCGFEPDEVTSINMLVACV----------- 349
           VVSWN MI  Y ++    +  +LL++  M+    E +EVT +N+L AC+           
Sbjct: 379 VVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRAL 438

Query: 350 ------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G +     +F  M + SVSSWNA++  ++Q+ + 
Sbjct: 439 HGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDP 498

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            +A+  + EM   G+ PD  ++  +L +C  +G+L+ GK++H   L+    ++++VA  L
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSL 558

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y  C +       F R+ + + VCWN+M++G S N L  EA   F+QM  + + P +
Sbjct: 559 LSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDE 618

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            + A++L +C++LS+   G++VH    K+  + D FV  +L++MY K G +  +++ F+ 
Sbjct: 619 IAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNR 678

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           ++GK   +WN MI G+  +G G++AV L++DM  S  +PD  TF+ +L AC H+GLV  G
Sbjct: 679 LNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEG 738

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
           +     MQ  + +EP L+HY C+ID LGRAG  +EA   I+EMP + D  IW  LLSS  
Sbjct: 739 LNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSI 798

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
            + ++ + ++ AE+L  L+   +  Y LL+N+Y++ G+WD +R VR+ M +  + KD
Sbjct: 799 TYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKD 855



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/617 (23%), Positives = 281/617 (45%), Gaps = 67/617 (10%)

Query: 135 DVEHGRRC-HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           +VE GR+    L +      +  +   L+++Y+ CG+   +  VF+ +   N   + A++
Sbjct: 122 NVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALV 181

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           SG  + +   EA+  F  +I    S+      +    C  + C  + D+           
Sbjct: 182 SGYVRNELYDEAIHTFLELI----SVTEFQPDNFTFPCLIKACTGKCDIHL--------- 228

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+ VH + +K+G   DL + N+++ +Y K G +D A  +F  +PE++++SWN +I G+
Sbjct: 229 --GKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGF 286

Query: 314 GQKYQSTKAIELLQRMKSC--GFEPDEVTSINMLVACVRSGDIKTGRE------------ 359
            +     +A    + +     G  PD  T + +L  C   G++  G              
Sbjct: 287 SENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVH 346

Query: 360 -----------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                  +F  + + SV SWN+M+ +YS+     E   L R+M 
Sbjct: 347 ELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMW 406

Query: 397 FRG--VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
                ++ +  T+  +L +C     L S + +H  SL+ +      + +  I  Y+KC  
Sbjct: 407 MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGS 466

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              AE VF  +    +  WN++I G + N   I+A  F+ +M +  + P  FS  ++L +
Sbjct: 467 LVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLA 526

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C +L     G+++H  + ++G   + FV  +L+ +Y  C   +  R +F+ M  KN+V W
Sbjct: 527 CGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCW 586

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF----- 629
           N M+ GY+QN   +EA+ L++ M++ G++PD+I   +IL ACS    + +G E+      
Sbjct: 587 NAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALK 646

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           NS+  D+ V         ++D   ++G    ++ + + +  K +   W V+++   +H  
Sbjct: 647 NSLMEDNFVA------CSLMDMYAKSGFLGHSQRIFNRLNGK-EVASWNVMITGFGVHGQ 699

Query: 690 VRLAKRAAEELFRLDPK 706
              A    E++ R D +
Sbjct: 700 GNKAVELFEDMKRSDKQ 716



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 158/312 (50%), Gaps = 10/312 (3%)

Query: 315 QKYQSTKAIELLQRMK-----SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSV 369
           QK    K +E+ +++      S  F  D V +  ++      G     R +FD + + ++
Sbjct: 115 QKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNL 174

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
             WNA++S Y ++E + EAI  F E+      +PD  T   ++ +C     +  GK VH 
Sbjct: 175 FQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHG 234

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
            ++K    +D +V + +I +Y KC   + A  +F ++PE +++ WNS+I G S N   +E
Sbjct: 235 MAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLE 294

Query: 489 AFMFFKQMRQ--NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
           A+  F+ + +  + + P   +  T+L  C+   +   G  +H    K G V+++ V +AL
Sbjct: 295 AYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNAL 354

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG--VKP 604
           I+MY KCG +  A   F  +  K+ V+WN MI  Y++ G+  E   L + M      ++ 
Sbjct: 355 IDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEV 414

Query: 605 DDITFVAILTAC 616
           +++T + +L AC
Sbjct: 415 NEVTILNLLPAC 426



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 144/284 (50%), Gaps = 6/284 (2%)

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAERVF 462
           +  + ++L  C     +E G+++      ++    ++V  + LI +YS C     +  VF
Sbjct: 107 KEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVF 166

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAF-MFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
            R+   ++  WN++++G   N L  EA   F + +   E  P  F+F  ++ +C      
Sbjct: 167 DRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDI 226

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G+ VH    K G + D+FVG+A+I +Y KCG +  A + FD M  +N ++WN +I G+
Sbjct: 227 HLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGF 286

Query: 582 AQNGYGDEAVRLYKDMIAS--GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           ++NG+  EA R ++ ++ S  G+ PD  T V +L  CS  G VDVG+ + + M +  G+ 
Sbjct: 287 SENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLV 345

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             L     +ID   + G   EA +L  ++  K   V W  ++ +
Sbjct: 346 HELMVCNALIDMYSKCGCLSEAAILFRKIENK-SVVSWNSMIGA 388


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/598 (34%), Positives = 338/598 (56%), Gaps = 51/598 (8%)

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V +   + G  K     +AL ++  M R  ++ D +   SV+     + CG +SD+ A
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVI-----KACGSQSDLQA 138

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G++VH   I  GFE+D+ +  +L  MY K G +++A  +F  +P+R VV
Sbjct: 139 -----------GRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVV 187

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           SWN +IAGY Q  Q  +A+ L   M+  G +P+  T ++++  C                
Sbjct: 188 SWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYA 247

Query: 349 VRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
           +RSG                   ++ T  ++F+ MP   V+SWNA++  YS +  H EA+
Sbjct: 248 IRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEAL 307

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
             F  MQ RG+KP+  T+  +L +CA +  LE G+Q+H  ++++    ++ V + L+ +Y
Sbjct: 308 AFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMY 367

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC     A ++F R+P+ ++V WN++I+G S +    EA   F +M+   + P  F+  
Sbjct: 368 AKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIV 427

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           +VL +CA   +  QG+Q+H    + G+ +++ VG+ L+++Y KCG++  A++ F+ M  +
Sbjct: 428 SVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQ 487

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + V+W  MI  Y  +G+G++A+ L+  M  +G K D I F AILTACSH+GLVD G++ F
Sbjct: 488 DVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYF 547

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
             M+ D+G+ P L+HY C++D LGRAGH  EA  +I  M  + D  +W  LL +CR+H N
Sbjct: 548 QCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCN 607

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           + L ++AA+ LF LDP N+  Y LL+NIY+   RW+D+  +R++M E  + K P  S+
Sbjct: 608 IELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSV 665



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 165/568 (29%), Positives = 279/568 (49%), Gaps = 84/568 (14%)

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           N V W   I   V+NG   KAL +Y +M   G  P  +   SV KA  +  D++ GR+ H
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
             +I  G + ++ V  AL S+Y KCG  ++A  VF+ M + + V++ A+++G ++  +  
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           EAL +F  M    +  +S +L SV+ VCA         + A           G+Q+HC  
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAH--------LLALEQ--------GKQIHCYA 247

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
           I+ G E+D+ + N L++MYAK G++++A  +F  +P R V SWN +I GY    Q  +A+
Sbjct: 248 IRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEAL 307

Query: 324 ELLQRMKSCGFEPDEVTSINMLVAC----------------VRS---------------- 351
               RM+  G +P+ +T +++L AC                +RS                
Sbjct: 308 AFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMY 367

Query: 352 ---GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
              G++ +  ++F+ MP  +V +WNA++S YSQ  +  EA+ LF EMQ +G+KPD   + 
Sbjct: 368 AKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIV 427

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
            +L +CA    LE GKQ+H  ++++    +  V +GL+ IY+KC     A+++F R+PE 
Sbjct: 428 SVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQ 487

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           D+V W +MI    ++    +A   F +M++        +F  +L++C+      QG Q  
Sbjct: 488 DVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYF 547

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
             ++ D      +  +  +E Y    D+ G                        + G+ D
Sbjct: 548 QCMKSD------YGLAPKLEHYACLVDLLG------------------------RAGHLD 577

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTAC 616
           EA  + K+M    ++PD   + A+L AC
Sbjct: 578 EANGIIKNM---SLEPDANVWGALLGAC 602



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 224/455 (49%), Gaps = 82/455 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H  I+  G   D  +   L  +Y+KC +                           
Sbjct: 138 AGRKVHEDIIARGFESDVIVGTALASMYTKCGS--------------------------- 170

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               LE A ++FD MP+R+VVSWN +I+   +NG   +AL+++++M   G  P   TL S
Sbjct: 171 ----LENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVS 226

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V      LL +E G++ H   I+ G++ ++ V N L+++YAKCG    A  +FE M   +
Sbjct: 227 VMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRD 286

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             ++ A++ G +   +  EAL  F  M  + +  +S+++ SVL  CA         +FA 
Sbjct: 287 VASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAH--------LFAL 338

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     GQQ+H   I+ GFE++  + N+L++MYAK G+++SA  +F  +P+++VV+
Sbjct: 339 EQ--------GQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVA 390

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------V 349
           WN +I+GY Q     +A+ L   M++ G +PD    +++L AC                +
Sbjct: 391 WNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTI 450

Query: 350 RS-------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
           RS                   G++ T +++F+ MP   V SW  M+ +Y    + ++A+ 
Sbjct: 451 RSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALA 510

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           LF +MQ  G K D      IL++C+  G+++ G Q
Sbjct: 511 LFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ 545



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 208/424 (49%), Gaps = 55/424 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H + +R+G+  D  + N L+ +Y+KC N ++A  LF++MP +D+ SWNAI+     
Sbjct: 240 GKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIG---- 295

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  Y L                     N    +AL+ +N+M   G  P  IT+ SV
Sbjct: 296 ------GYSL---------------------NSQHHEALAFFNRMQVRGIKPNSITMVSV 328

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L  +E G++ HG  I+ G + N  V NAL+++YAKCG    A  +FE M + N 
Sbjct: 329 LPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNV 388

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + A++SG ++     EAL +F  M  + +  DS ++ SVL  CA              
Sbjct: 389 VAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAH------------- 435

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
              F     G+Q+H  TI+ GFE+++ +   L+D+YAK G++++A+ +F  +PE+ VVSW
Sbjct: 436 ---FLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSW 492

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             MI  YG       A+ L  +M+  G + D +    +L AC  +G +  G + F  M S
Sbjct: 493 TTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKS 552

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +  ++    ++ +  EA  + + M    ++PD      +L +C     +E
Sbjct: 553 DYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMS---LEPDANVWGALLGACRIHCNIE 609

Query: 422 SGKQ 425
            G+Q
Sbjct: 610 LGEQ 613


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/777 (30%), Positives = 415/777 (53%), Gaps = 88/777 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCN-RLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ L   +  +  F   F+ N RLI +YS C     ++ +FD++ +K+++ WNA      
Sbjct: 126 GRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNA------ 179

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLA 124
                                    L+S  VRN L ++A+  + ++ S   F P + T  
Sbjct: 180 -------------------------LVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFP 214

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            + KA T   D+  G+  HG+ +K+GL  +++V NA+++LY KCG+   AV +F++M E 
Sbjct: 215 CLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQ 274

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI--DSVSLSSVLGVCAREGCGVESDV 242
           N +++ +++ G ++    +EA   FR ++     +  D  ++ ++L VC+ EG     DV
Sbjct: 275 NLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEG---NVDV 331

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G  +H + +KLG   +L + N+L+DMY+K G +  A ++F  +  +S
Sbjct: 332 -------------GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKS 378

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQR--MKSCGFEPDEVTSINMLVACV----------- 349
           VVSWN MI  Y ++    +  +LL++  M+    E +EVT +N+L AC+           
Sbjct: 379 VVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRAL 438

Query: 350 ------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G +     +F  M + SVSSWNA++  ++Q+ + 
Sbjct: 439 HGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDP 498

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            +A+  + EM   G+ PD  ++  +L +C  +G+L+ GK++H   L+    ++++VA  L
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSL 558

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y  C +       F  + + + VCWN+M++G S N L  EA   F+QM  + + P +
Sbjct: 559 LSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDE 618

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            + A++L +C++LS+   G++VH    K+  + D FV  +L++MY K G +  +++ F+ 
Sbjct: 619 IAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNR 678

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           ++GK   +WN MI G+  +G G++AV L++DM  S  +PD  TF+ +L AC H+GLV  G
Sbjct: 679 LNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEG 738

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
           +     MQ  + +EP L+HY C+ID LGRAG  +EA   I+EMP + D  IW  LLSS  
Sbjct: 739 LNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSI 798

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
            + ++ + ++ AE+L  L+   +  Y LL+N+Y++ G+WD +R VR+ M +  + KD
Sbjct: 799 TYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKD 855



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 147/617 (23%), Positives = 281/617 (45%), Gaps = 67/617 (10%)

Query: 135 DVEHGRRC-HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           +VE GR+    L +      +  +   L+++Y+ CG+   +  VF+ +   N   + A++
Sbjct: 122 NVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALV 181

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           SG  + +   EA+  F  +I    S+      +    C  + C  + D+           
Sbjct: 182 SGYVRNELYDEAIHTFLELI----SVTEFQPDNFTFPCLIKACTGKCDIHL--------- 228

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+ VH + +K+G   DL + N+++ +Y K G +D A  +F  +PE++++SWN +I G+
Sbjct: 229 --GKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGF 286

Query: 314 GQKYQSTKAIELLQRMKSC--GFEPDEVTSINMLVACVRSGDIKTGRE------------ 359
            +     +A    + +     G  PD  T + +L  C   G++  G              
Sbjct: 287 SENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVH 346

Query: 360 -----------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                  +F  + + SV SWN+M+ +YS+     E   L R+M 
Sbjct: 347 ELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMW 406

Query: 397 FRG--VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
                ++ +  T+  +L +C     L S + +H  SL+ +      + +  I  Y+KC  
Sbjct: 407 MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGS 466

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              AE VF  +    +  WN++I G + N   I+A  F+ +M +  + P  FS  ++L +
Sbjct: 467 LVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLA 526

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C +L     G+++H  + ++G   + FV  +L+ +Y  C   +  R +F+ M  KN+V W
Sbjct: 527 CGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCW 586

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF----- 629
           N M+ GY+QN   +EA+ L++ M++ G++PD+I   +IL ACS    + +G E+      
Sbjct: 587 NAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALK 646

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           NS+  D+ V         ++D   ++G    ++ + + +  K +   W V+++   +H  
Sbjct: 647 NSLMEDNFVA------CSLMDMYAKSGFLGHSQRIFNRLNGK-EVASWNVMITGFGVHGQ 699

Query: 690 VRLAKRAAEELFRLDPK 706
              A    E++ R D +
Sbjct: 700 GNKAVELFEDMKRSDKQ 716



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 158/312 (50%), Gaps = 10/312 (3%)

Query: 315 QKYQSTKAIELLQRMK-----SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSV 369
           QK    K +E+ +++      S  F  D V +  ++      G     R +FD + + ++
Sbjct: 115 QKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNL 174

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
             WNA++S Y ++E + EAI  F E+      +PD  T   ++ +C     +  GK VH 
Sbjct: 175 FQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHG 234

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
            ++K    +D +V + +I +Y KC   + A  +F ++PE +++ WNS+I G S N   +E
Sbjct: 235 MAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLE 294

Query: 489 AFMFFKQMRQ--NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
           A+  F+ + +  + + P   +  T+L  C+   +   G  +H    K G V+++ V +AL
Sbjct: 295 AYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNAL 354

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG--VKP 604
           I+MY KCG +  A   F  +  K+ V+WN MI  Y++ G+  E   L + M      ++ 
Sbjct: 355 IDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEV 414

Query: 605 DDITFVAILTAC 616
           +++T + +L AC
Sbjct: 415 NEVTILNLLPAC 426



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 144/284 (50%), Gaps = 6/284 (2%)

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAERVF 462
           +  + ++L  C     +E G+++      ++    ++V  + LI +YS C     +  VF
Sbjct: 107 KEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVF 166

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAF-MFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
            R+   ++  WN++++G   N L  EA   F + +   E  P  F+F  ++ +C      
Sbjct: 167 DRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDI 226

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G+ VH    K G + D+FVG+A+I +Y KCG +  A + FD M  +N ++WN +I G+
Sbjct: 227 HLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGF 286

Query: 582 AQNGYGDEAVRLYKDMIAS--GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           ++NG+  EA R ++ ++ S  G+ PD  T V +L  CS  G VDVG+ + + M +  G+ 
Sbjct: 287 SENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLV 345

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             L     +ID   + G   EA +L  ++  K   V W  ++ +
Sbjct: 346 HELMVCNALIDMYSKCGCLSEAAILFRKIENK-SVVSWNSMIGA 388


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 259/839 (30%), Positives = 413/839 (49%), Gaps = 136/839 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  HA IL      + FL N LI +YSKC +                            
Sbjct: 58  GKCTHARILTFEENPERFLINNLISMYSKCGS---------------------------- 89

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNG---LE--EKALSVYNKMSNEGFVPTHI 121
              L +A ++FD+MP+R++VSWN++++A  ++    +E  ++A  ++  +  +    + +
Sbjct: 90  ---LTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRM 146

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           TL+ + K       V      HG   KIGLD + +VA AL+++Y K G  K    +FEEM
Sbjct: 147 TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM 206

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEM---------------FRLMIRK----------- 215
              + V +  M+    +     EA+++                RL+ R            
Sbjct: 207 PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVK 266

Query: 216 --AVSIDSVSLSSVL----GVCAREGCG------------VESDV---------FAQSDN 248
             A   D+ S+S ++    G+      G            VESDV            +  
Sbjct: 267 SFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAV 326

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
           K      GQQVHC+ +KLG +  L +SNSL++MY K      A  +F N+ ER ++SWN 
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--------------------- 347
           +IAG  Q     +A+ L  ++  CG +PD+ T  ++L A                     
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446

Query: 348 --------------------CVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                               C++  +I   R  FD      + +WNAM++ Y+QS +  +
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD------LVAWNAMMAGYTQSHDGHK 500

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
            +KLF  M  +G + D  TLA +  +C  +  +  GKQVHA ++K+   +D +V+SG++ 
Sbjct: 501 TLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILD 560

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y KC     A+  F  IP  D V W +MI+G   N  +  AF  F QMR   + P +F+
Sbjct: 561 MYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
            AT+  + + L++  QGRQ+HA   K    ND FVG++L++MY KCG I  A   F  + 
Sbjct: 621 IATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIE 680

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
             N   WN M+ G AQ+G G E ++L+K M + G+KPD +TF+ +L+ACSHSGLV    +
Sbjct: 681 MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYK 740

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
              SM  D+G++P ++HY+C+ D LGRAG   +AE LI+ M  +    ++  LL++CR+ 
Sbjct: 741 HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQ 800

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +    KR A +L  L+P +S+ Y LL+N+Y++  +WD+++  R +M  + + KDP +S
Sbjct: 801 GDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFS 859



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 151/561 (26%), Positives = 274/561 (48%), Gaps = 32/561 (5%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D+  G+  H  ++    +   ++ N L+S+Y+KCG   +A  VF++M + + V++ ++++
Sbjct: 54  DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113

Query: 195 GLAKTDRVV-----EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             A++   V     +A  +FR++ +  V    ++LS +L +C   G    S+ F      
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF------ 167

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                     H    K+G + D  ++ +L+++Y K G +   +V+F  +P R VV WN+M
Sbjct: 168 ----------HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLM 217

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG--REMFDSMPSP 367
           +  Y +     +AI+L     S G  P+E+T    L+A +   D   G  +   +   + 
Sbjct: 218 LKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL--RLLARISGDDSDAGQVKSFANGNDAS 275

Query: 368 SVSSW---NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           SVS     N  LS Y  S  +   +K F +M    V+ D+ T  ++L++   +  L  G+
Sbjct: 276 SVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQ 335

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           QVH  +LK    +   V++ LI +Y K ++   A  VF  + E D++ WNS+IAG++ N 
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395

Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVNDIFVG 543
           L++EA   F Q+ +  + P Q++  +VL + + L       +QVH    K   V+D FV 
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS 455

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           +ALI+ Y +   +  A   F+  H  + V WN M+ GY Q+  G + ++L+  M   G +
Sbjct: 456 TALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
            DD T   +   C     ++ G ++ ++  +  G +  L   + ++D   + G    A+ 
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 573

Query: 664 LIDEMPCKDDPVIWEVLLSSC 684
             D +P  DD V W  ++S C
Sbjct: 574 AFDSIPVPDD-VAWTTMISGC 593


>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 233/722 (32%), Positives = 380/722 (52%), Gaps = 50/722 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           ++++ A  K+   E AYK+F +    NV  WN +I+  +RN        ++++M N    
Sbjct: 11  SSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQK 70

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T +SV  A  +L ++  G+     VIK G + +++V  +++ LYAKCG    A  V
Sbjct: 71  PDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEAREV 129

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  +S P+ V++T M+SG  K++    ALE+FR M    V I+S +++SV+  C R    
Sbjct: 130 FSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMV 189

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
            E+                 QVH    K GF  D  ++ +L+ M +K+GD++ +E +F +
Sbjct: 190 CEA----------------SQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFED 233

Query: 298 LPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE--VTSINMLVACV----- 349
           L + R     NVM+  + Q  +  KAI L  RM   G  PDE  V S+  ++ C+     
Sbjct: 234 LDDIRRQNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNLGKQ 293

Query: 350 -------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                    + G ++    +F  +P    + W +M+S +++   
Sbjct: 294 VHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGY 353

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            +EAI LF EM   G  PD +TLA +L+ C+++  L   K++H  +L+        + S 
Sbjct: 354 LREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSA 413

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           L+  YSKC   +LA +V+ R+PE+D V  +S+I+G S + L  + F+ F+ M  +     
Sbjct: 414 LVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMD 473

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            ++ +++L +      S  G QVHA I K G   +  VGS+L+ MY K G I    + F 
Sbjct: 474 SYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFS 533

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            ++G + + W  +I  YAQ+G  +EA+++Y  M   G KPD +TFV +L+ACSH GLV+ 
Sbjct: 534 QINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEE 593

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G    NSM  D+G+EP   HY CM+D LGR+G   EAE  I+  P K D ++W  LL++C
Sbjct: 594 GYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAAC 653

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           +++ +V L K AA++   L+P ++  Y  L+NI + +G WD++   R+LM    + K+P 
Sbjct: 654 KIYGDVELGKLAAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPG 713

Query: 745 YS 746
           +S
Sbjct: 714 WS 715



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 237/508 (46%), Gaps = 56/508 (11%)

Query: 157 VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
           V ++L+  ++K    + A  VF +    N   +  +++G  +        ++F  M    
Sbjct: 9   VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGF 68

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
              DS + SSVL  CA           +  + +F     G+ V    IK G E D+ +  
Sbjct: 69  QKPDSYTYSSVLAACA-----------SLEELRF-----GKVVQARVIKCGAE-DVFVCT 111

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           S++D+YAK G M  A  +FS +   SVVSW VM++GY +   +  A+E+ + M+  G E 
Sbjct: 112 SIVDLYAKCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEI 171

Query: 337 DEVTSINMLVACVR-----------------------------------SGDIKTGREMF 361
           +  T  +++ AC R                                   SGDI     +F
Sbjct: 172 NSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVF 231

Query: 362 DSMPSPSVSSW-NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           + +      +  N M++S+SQ++   +AI+LF  M   G+ PD  ++  +LS    +  L
Sbjct: 232 EDLDDIRRQNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLS---VLDCL 288

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
             GKQVH+ +LK+   +D  V S L  +YSKC   E +  +F  IP  D  CW SMI+G 
Sbjct: 289 NLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGF 348

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           +      EA   F +M      P + + A VL+ C+ L S  + +++H    + G    +
Sbjct: 349 NEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGM 408

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            +GSAL+  Y KCG +  AR+ +D +   + V+ + +I GY+Q+G   +   L++DM+ S
Sbjct: 409 PLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMS 468

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEI 628
           G   D     +IL A   S   ++G ++
Sbjct: 469 GFSMDSYAISSILKAAVLSEESELGAQV 496



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 207/423 (48%), Gaps = 55/423 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H++ L++GL  D  + + L  +YSKC +                            
Sbjct: 291 GKQVHSYTLKSGLILDLTVGSSLFTMYSKCGS---------------------------- 322

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              LE +Y LF E+P ++   W ++IS     G   +A+ ++++M +EG  P   TLA+V
Sbjct: 323 ---LEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAV 379

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               ++L  +   +  HG  ++ G+D+ + + +AL++ Y+KCG  K A  V++ + E + 
Sbjct: 380 LTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDP 439

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+ ++++SG ++   V +   +FR M+    S+DS ++SS+L          ++ V ++ 
Sbjct: 440 VSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSIL----------KAAVLSEE 489

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G QVH    K+G   +  + +SLL MY+K G ++     FS +    +++W
Sbjct: 490 SE------LGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAW 543

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             +IA Y Q  ++ +A+++   MK  GF+PD+VT + +L AC   G ++ G    +SM  
Sbjct: 544 TALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVK 603

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  M+ +  +S   +EA      +  R +KPD      +L++C   G +E
Sbjct: 604 DYGIEPENRHYVCMVDALGRSGRLREAENF---INTRPIKPDALVWGTLLAACKIYGDVE 660

Query: 422 SGK 424
            GK
Sbjct: 661 LGK 663



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 135/548 (24%), Positives = 240/548 (43%), Gaps = 91/548 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++ A +++ G  +D F+C  +++LY+KC +   A+ +F ++ +  + SW  +LS   K
Sbjct: 92  GKVVQARVIKCGA-EDVFVCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVMLSGYTK 150

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S+D   A ++F EM                 +G+E  + +V + +S  G  P+ +  AS 
Sbjct: 151 SNDAFSALEIFREMR---------------HSGVEINSCTVTSVISACG-RPSMVCEAS- 193

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
                         + H  V K G   +  VA AL+S+ +K G    +  VFE++ +   
Sbjct: 194 --------------QVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRR 239

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV--CAREGCGVESDVF 243
           +     M++  ++  +  +A+ +F  M+++ ++ D  S+ S+L V  C            
Sbjct: 240 QNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLN---------- 289

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+QVH  T+K G   DL + +SL  MY+K G ++ +  +F  +P +  
Sbjct: 290 -----------LGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDN 338

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------- 348
             W  MI+G+ +     +AI L   M   G  PDE T   +L  C               
Sbjct: 339 ACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGY 398

Query: 349 --------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + G +K  R+++D +P     S ++++S YSQ    ++ 
Sbjct: 399 TLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDG 458

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
             LFR+M   G   D   ++ IL +       E G QVHA   K     +  V S L+ +
Sbjct: 459 FLLFRDMVMSGFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTM 518

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           YSK    E   + F +I   D++ W ++IA  + +    EA   +  M++    P + +F
Sbjct: 519 YSKFGSIEDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTF 578

Query: 509 ATVLSSCA 516
             VLS+C+
Sbjct: 579 VGVLSACS 586



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 193/399 (48%), Gaps = 13/399 (3%)

Query: 338 EVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
           EV   +++ A  ++   +   ++F    S +V  WN +++   +++N+     LF EM  
Sbjct: 7   EVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCN 66

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
              KPD  T + +L++CA++  L  GK V A  +K  +  D +V + ++ +Y+KC     
Sbjct: 67  GFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAE 125

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A  VF RI    +V W  M++G + ++    A   F++MR + +     +  +V+S+C +
Sbjct: 126 AREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGR 185

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF---DMMHGKNTVTW 574
            S   +  QVHA + K G+  D  V +ALI M  K GDI  + + F   D +  +N V  
Sbjct: 186 PSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV-- 243

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N M+  ++QN    +A+RL+  M+  G+ PD+ +  ++L+       +++G ++ +S  L
Sbjct: 244 NVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLD---CLNLGKQV-HSYTL 299

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
             G+   L   + +     + G   E+  L  E+P KD+   W  ++S    +  +R A 
Sbjct: 300 KSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDN-ACWASMISGFNEYGYLREAI 358

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
               E+  LD   S   S LA + +       L   +E+
Sbjct: 359 GLFSEM--LDEGTSPDESTLAAVLTVCSSLPSLPRSKEI 395



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 141/326 (43%), Gaps = 54/326 (16%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H + LR G+     L + L+  YSKC +   A+ ++D++P                 
Sbjct: 393 KEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLP----------------- 435

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                         E + VS ++LIS   ++GL +    ++  M   GF      ++S+ 
Sbjct: 436 --------------EMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSIL 481

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA+    + E G + H  + KIGL     V ++LL++Y+K G  +     F +++ P+ +
Sbjct: 482 KAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLI 541

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            +TA+++  A+  +  EAL+++ LM  K    D V+   VL  C+  G  VE   F    
Sbjct: 542 AWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGL-VEEGYF---- 596

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVSW 306
                      ++ +    G E +      ++D   ++G +  AE   +  P +   + W
Sbjct: 597 ----------HLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVW 646

Query: 307 NVMIAG---YGQ----KYQSTKAIEL 325
             ++A    YG     K  + KAIEL
Sbjct: 647 GTLLAACKIYGDVELGKLAAKKAIEL 672



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 7/150 (4%)

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           GY     V S+LI+ + K      A + F      N   WN +I G  +N        L+
Sbjct: 2   GYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLF 61

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC--MIDCL 652
            +M     KPD  T+ ++L AC+    +  G ++  +  +  G E   D + C  ++D  
Sbjct: 62  HEMCNGFQKPDSYTYSSVLAACASLEELRFG-KVVQARVIKCGAE---DVFVCTSIVDLY 117

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            + GH  EA  +   +      V W V+LS
Sbjct: 118 AKCGHMAEAREVFSRIS-NPSVVSWTVMLS 146


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/688 (33%), Positives = 367/688 (53%), Gaps = 61/688 (8%)

Query: 99  GLEEKALSVYNKMSNE-GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYV 157
           G  E+AL V+  +  + G  P    LASV +A T L  VE G + HG V++ G D+++YV
Sbjct: 15  GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
             +L+  Y+K G  + A  VF+++ E   VT+T +++G  K  R   +LE+F  M    V
Sbjct: 75  GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134

Query: 218 SIDSVSLSSVLGVCAR----EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
             D   +SSVL  C+     EG                    G+Q+H   ++ G E D+ 
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEG--------------------GKQIHAYVLRRGTEMDVS 174

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           + N L+D Y K   + +   +F  +  ++++SW  MI+GY Q     +A++L   M   G
Sbjct: 175 VVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG 234

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREM--------------------------------- 360
           ++PD     ++L +C     ++ GR++                                 
Sbjct: 235 WKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAK 294

Query: 361 --FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
             FD M   +V S+NAM+  YS  E   EA++LF EM+ R   P   T   +L   A++ 
Sbjct: 295 KVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLF 354

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            LE  KQ+H   +K    +D +  S LI +YSKC   + A  VF  + E DIV WN+M  
Sbjct: 355 ALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFF 414

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G + +  + EA   +  ++ +   P +F+FA ++++ + L+S   G+Q H Q+ K G   
Sbjct: 415 GYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDF 474

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
             FV +AL++MY KCG I  AR+ F+    ++ V WN MI  +AQ+G  +EA+ ++++M+
Sbjct: 475 CPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMM 534

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
             G++P+ +TFVA+L+ACSH+G V+ G+  FNSM    G++P  +HY C++  LGR+G  
Sbjct: 535 KEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKL 593

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
            EA+  I++MP +   ++W  LLS+CR+  NV L K AAE     DPK+S  Y LL+NI+
Sbjct: 594 FEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIF 653

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +S G W D++ VR+ M  + +VK+P  S
Sbjct: 654 ASKGMWADVKKVRDRMDSSEVVKEPGRS 681



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 148/595 (24%), Positives = 269/595 (45%), Gaps = 82/595 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH  ++R+G   D ++   LI+ YSK                               
Sbjct: 56  GAQLHGFVVRSGFDQDVYVGTSLIDFYSK------------------------------- 84

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           + B+E A  +FD++ E+  V+W  +I+   + G    +L ++ +M     VP    ++SV
Sbjct: 85  NGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSV 144

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + L  +E G++ H  V++ G + ++ V N L+  Y KC   K    +F++M   N 
Sbjct: 145 LSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNI 204

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++T M+SG  +     EA+++F  M R     D  + +SVL  C               
Sbjct: 205 ISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCG-------------- 250

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+QVH  TIK   E++  + N L+DMYAK+  +  A+ +F  + E++V+S+
Sbjct: 251 --SLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISY 308

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----------------CVR 350
           N MI GY  + + ++A+EL   M+   F P  +T +++L                   ++
Sbjct: 309 NAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIK 368

Query: 351 SG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
            G                    +K  R +F+ M    +  WNAM   Y+Q   ++EA+KL
Sbjct: 369 XGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKL 428

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           +  +QF   KP+  T A ++++ + +  L  G+Q H   +K       +V + L+ +Y+K
Sbjct: 429 YSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAK 488

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E A ++F+     D+VCWNSMI+  + +    EA   F++M +  + P   +F  V
Sbjct: 489 CGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAV 548

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           LS+C+       G      +   G        + ++ +  + G ++ A++F + M
Sbjct: 549 LSACSHAGXVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKM 603



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 212/453 (46%), Gaps = 82/453 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +HA++LR G   D  + N LI+ Y+KCN   + + LFD+M  K+I SW        
Sbjct: 156 GGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISW-------- 207

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    +IS  ++N  + +A+ ++ +M+  G+ P      S
Sbjct: 208 -----------------------TTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTS 244

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  +  +L  +E GR+ H   IK  L+ N +V N L+ +YAK      A  VF+ M+E N
Sbjct: 245 VLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQN 304

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++ AM+ G +  +++ EALE+F  M  +      ++  S+LGV A         +FA 
Sbjct: 305 VISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSA--------SLFAL 356

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
             +K        Q+H L IK G   DL   ++L+D+Y+K   +  A  +F  + E+ +V 
Sbjct: 357 ELSK--------QIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVV 408

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN M  GY Q  ++ +A++L   ++    +P+E T   ++ A                  
Sbjct: 409 WNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLV 468

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G I+  R+MF+S     V  WN+M+S+++Q    +EA+ 
Sbjct: 469 KMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALG 528

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +FREM   G++P+  T   +LS+C+  G +E G
Sbjct: 529 MFREMMKEGIQPNYVTFVAVLSACSHAGXVEDG 561


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 252/789 (31%), Positives = 396/789 (50%), Gaps = 92/789 (11%)

Query: 1   KKAHVAGKLLHAHILRNGLFDD---TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSW 57
           ++A   G+ LHAH +  G   D    FL  +L+ +Y KC           ++P       
Sbjct: 68  RRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCG----------RLPD------ 111

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE--- 114
                          A++LFD MP R V SWN LI A + +G   +A+ VY  M      
Sbjct: 112 ---------------AHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPV 156

Query: 115 -GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
            G  P   TLASV KA  A  D   G   HGL +K GLD++  VANAL+ +YAKCG    
Sbjct: 157 AGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDS 216

Query: 174 AVPVFEEMSEPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           A+ VFE M +  +V ++ + +SG  +    +EAL++FR M     S++S +   VL VCA
Sbjct: 217 ALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCA 276

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                      AQ +       HG+++H   +K G E ++   N+LL MYA+ G +DSA 
Sbjct: 277 E---------LAQLN-------HGRELHAALLKCGTEFNIQ-CNALLVMYARCGWVDSAL 319

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  + ++  +SWN M++ Y Q     +AI+    M   GF PD    +++L A    G
Sbjct: 320 RVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLG 379

Query: 353 DIKTGRE-----------------------------------MFDSMPSPSVSSWNAMLS 377
            +  GRE                                   +FD M      SW  +++
Sbjct: 380 RLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIA 439

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y+QS  + EAI  FR  Q  G+K D   +  IL +C+ +  +   KQVH+ +++    +
Sbjct: 440 CYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-L 498

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D  + + +I IY +C     A  +F  + + DIV W SM+   + N L  EA   F +M 
Sbjct: 499 DLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKML 558

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
              + P   +   +L + A LSS  +G+++H  + +  +  +  V S+L++MY  CG + 
Sbjct: 559 NAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMN 618

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A + FD    K+ V W  MI+    +G+G +A+ ++K M+ +GV PD ++F+A+L ACS
Sbjct: 619 YALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACS 678

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           HS LVD G    + M   + ++P  +HY C++D LGR+G   EA   I  MP +   V+W
Sbjct: 679 HSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVW 738

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
             LL +CR+H N  LA  A ++L  L+P N   Y L++N+++ +G+W++++ +R  M+E 
Sbjct: 739 CALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQ 798

Query: 738 CIVKDPAYS 746
            + KDPA S
Sbjct: 799 GLRKDPACS 807


>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
 gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
          Length = 834

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 246/765 (32%), Positives = 392/765 (51%), Gaps = 65/765 (8%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A   G+  HA +L +G     F+ N L+++Y++C     A  +FD MPH+D  SWN +L+
Sbjct: 46  ALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTMLT 105

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
           A     D   A  L   MP+ +VVSWN L+S   + G+    + +  +M+  G  P   T
Sbjct: 106 AYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTT 165

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           LA + KA   L D+  G + H L +K GL+ ++   +AL+ +Y KC   + A+  F  M 
Sbjct: 166 LAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMG 225

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESD 241
           E N V++ A+++G  + ++ +  LE   L+ R KA++  S +                  
Sbjct: 226 ERNSVSWGAVIAGCVQNEQYMRGLE---LLCRCKAITCLSTA------------------ 264

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                          +Q+H   IK  F +D  +  +++D+YAK   +  A   F  LP  
Sbjct: 265 ---------------RQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNH 309

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VR 350
           +V + N M+ G  +     +A++L Q M   G     V+   +  AC           VR
Sbjct: 310 TVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVDVCVR 369

Query: 351 S------GDIKTGRE---MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           +      G  K   E   +F  M      SWN ++++  Q+E +++ I    EM   G++
Sbjct: 370 NAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGME 429

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            D  T   +L +CA +  LE G  VH  ++K+   +D +V+S ++ +Y KC     A ++
Sbjct: 430 ADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKL 489

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
             RI   ++V WNS+IAG SLN    EA  FF +M    + P  F++ATVL SCA L++ 
Sbjct: 490 HDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATI 549

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G+Q+H QI K   + D F+ S L++MY KCG++  ++  F+ +   + V+WN MI GY
Sbjct: 550 ELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGY 609

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           A +G G EA+ +++    + V P+  TFVA+L ACSH GL+D G   F+ M   + +EP 
Sbjct: 610 ALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQ 669

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           L+H+ CM           EA   I  MP + D VIW+ LLS C++  +V +A+ AA  + 
Sbjct: 670 LEHFACMGP--------QEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVL 721

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           RLDP +S+ Y LL+N+Y+  G+W D+   R LM +  + K+P  S
Sbjct: 722 RLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCS 766



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 33/210 (15%)

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           FS    L + A  S+   G+  HA++   G+V  +FV + L++MY +CG    A   FD 
Sbjct: 32  FSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDT 91

Query: 566 MHGKNTVTWNEM-------------------------------IHGYAQNGYGDEAVRLY 594
           M  ++TV+WN M                               + GY Q G   + V L 
Sbjct: 92  MPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLS 151

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
            +M   GV PD  T   +L AC     + +GV+I +++ +  G+E  +   + ++D  G+
Sbjct: 152 IEMARCGVAPDRTTLAVLLKACGGLDDLALGVQI-HALAVKTGLEMDVRAGSALVDMYGK 210

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
                +A      M  + + V W  +++ C
Sbjct: 211 CRSLEDALHFFHGMG-ERNSVSWGAVIAGC 239


>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
 gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
 gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/724 (32%), Positives = 381/724 (52%), Gaps = 54/724 (7%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +A++    K+   E AYK+F +    NV  WN +I+  +RN        ++++M      
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T +SV  A  +L  +  G+     VIK G + +++V  A++ LYAKCG    A+ V
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEV 307

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  +  P+ V++T M+SG  K++    ALE+F+ M    V I++ +++SV+  C R    
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
            E+                 QVH    K GF  D  ++ +L+ MY+K+GD+D +E +F +
Sbjct: 368 CEA----------------SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED 411

Query: 298 LPE---RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML--VACV--- 349
           L +   +++V  NVMI  + Q  +  KAI L  RM   G   DE +  ++L  + C+   
Sbjct: 412 LDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG 469

Query: 350 ---------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      + G ++   ++F  +P    + W +M+S +++ 
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
              +EAI LF EM   G  PD +TLA +L+ C++   L  GK++H  +L+        + 
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           S L+ +YSKC   +LA +V+ R+PELD V  +S+I+G S + L  + F+ F+ M  +   
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
              F+ +++L + A    S  G QVHA I K G   +  VGS+L+ MY K G I    + 
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F  ++G + + W  +I  YAQ+G  +EA+++Y  M   G KPD +TFV +L+ACSH GLV
Sbjct: 710 FSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLV 769

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           +      NSM  D+G+EP   HY CM+D LGR+G   EAE  I+ M  K D ++W  LL+
Sbjct: 770 EESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLA 829

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           +C++H  V L K AA++   L+P ++  Y  L+NI + +G WD++   R+LM    + K+
Sbjct: 830 ACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKE 889

Query: 743 PAYS 746
           P +S
Sbjct: 890 PGWS 893



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 178/614 (28%), Positives = 291/614 (47%), Gaps = 60/614 (9%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D++   ++LS    S  +  A KLFD +P+ +VVS N +IS   ++ L E++L  ++KM 
Sbjct: 83  DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRR--CHGLVIKIGLDKNIYVANALLSLYAKCGW 170
             GF    I+  SV  A +AL          CH   IK+G      V +AL+ +++K   
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCH--TIKMGYFFYEVVESALIDVFSKNLR 200

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            + A  VF +    N   +  +++G  +        ++F  M       DS + SSVL  
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CA                   +   G+ V    IK G E D+ +  +++D+YAK G M  
Sbjct: 261 CA----------------SLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAE 303

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A  +FS +P  SVVSW VM++GY +   +  A+E+ + M+  G E +  T  +++ AC R
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363

Query: 351 -----------------------------------SGDIKTGREMFDSMPSPSVSSW-NA 374
                                              SGDI    ++F+ +      +  N 
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNV 423

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M++S+SQS+   +AI+LF  M   G++ D  ++  +LS    +  L  GKQVH  +LK+ 
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS---VLDCLNLGKQVHGYTLKSG 480

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             +D  V S L  +YSKC   E + ++F  IP  D  CW SMI+G +      EA   F 
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           +M  +   P + + A VL+ C+   S  +G+++H    + G    + +GSAL+ MY KCG
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
            +  ARQ +D +   + V+ + +I GY+Q+G   +   L++DM+ SG   D     +IL 
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660

Query: 615 ACSHSGLVDVGVEI 628
           A + S    +G ++
Sbjct: 661 AAALSDESSLGAQV 674



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 204/423 (48%), Gaps = 55/423 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H + L++GL  D  + + L  LYSKC +                            
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS---------------------------- 500

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              LE +YKLF  +P ++   W ++IS     G   +A+ ++++M ++G  P   TLA+V
Sbjct: 501 ---LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAV 557

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               ++   +  G+  HG  ++ G+DK + + +AL+++Y+KCG  K A  V++ + E + 
Sbjct: 558 LTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDP 617

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+ ++++SG ++   + +   +FR M+    ++DS ++SS+L   A      ES +    
Sbjct: 618 VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSD---ESSL---- 670

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G QVH    K+G   +  + +SLL MY+K G +D     FS +    +++W
Sbjct: 671 ---------GAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAW 721

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             +IA Y Q  ++ +A+++   MK  GF+PD+VT + +L AC   G ++      +SM  
Sbjct: 722 TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVK 781

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  M+ +  +S   +EA      M    +KPD      +L++C   G +E
Sbjct: 782 DYGIEPENRHYVCMVDALGRSGRLREAESFINNMH---IKPDALVWGTLLAACKIHGEVE 838

Query: 422 SGK 424
            GK
Sbjct: 839 LGK 841


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 244/749 (32%), Positives = 390/749 (52%), Gaps = 58/749 (7%)

Query: 36  CNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISAL 95
           C   HS   +F    H DI+  N +L A  K + +  A KLFD M  +N+V+W++++S  
Sbjct: 57  CKKIHSKIVVFGFHKH-DIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMY 115

Query: 96  VRNG--LEEKALSV-YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLD 152
             +   LE   L V + +  NE   P    LASV +A T    +    + HGLV+K G  
Sbjct: 116 THHSHCLEALMLFVQFMRSCNEK--PNEYILASVVRACTQFGGLNPALQIHGLVVKGGYV 173

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           +++YV  +L+  Y K      A  +F+ +      T+T +++G +K  R   +L++F  M
Sbjct: 174 QDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQM 233

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
               V  D   LSSVL  C                 KF     G+Q+HC  ++ G   D+
Sbjct: 234 KEGHVCPDKYVLSSVLSACLML--------------KFLEG--GKQIHCYVLRSGIVMDV 277

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            + N  +D Y K   +     +F  + +++VVSW  +IAG  Q      A++L   M   
Sbjct: 278 SMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARM 337

Query: 333 GFEPDEVTSINMLVAC--------------------------VRSG---------DIKTG 357
           G+ PD     ++L +C                          V++G          +   
Sbjct: 338 GWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDA 397

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R++F+ M +  + S+NAM+  YS+ +   EA+ LFREM+     P       +L   A++
Sbjct: 398 RKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASL 457

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
             LE   Q+H   +K    +D +  S LI +YSKC R   A  VF  I + DIV W +M 
Sbjct: 458 YHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMF 517

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
           +G +  S + E+   +K ++ + + P +F+FA V+++ + ++S   G+Q H Q+ K G+ 
Sbjct: 518 SGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFD 577

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           +D FV + L++MY K G I  A + F   + K+T  WN MI  YAQ+G  ++A+++++DM
Sbjct: 578 DDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDM 637

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           I  G+KP+ +TFV +L+ACSH+GL+D+G + F+SM    G+EP ++HY CM+  LGRAG 
Sbjct: 638 IMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMS-QFGIEPGIEHYVCMVSLLGRAGK 696

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
            +EA+  I++MP K   V+W  LLS+CR+  NV L   AAE     +P +S  Y LL+NI
Sbjct: 697 LYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNI 756

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++S G W ++R +RE M  + +VK+P  S
Sbjct: 757 FASKGMWVNVRRLREKMDISGVVKEPGCS 785



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/608 (24%), Positives = 263/608 (43%), Gaps = 89/608 (14%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H  +++ G   D ++C  LI+ Y+K      A+ LFD +  K  ++W  I++   K   
Sbjct: 163 IHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGR 222

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
            + + KLFD+M E +V                                P    L+SV  A
Sbjct: 223 SQVSLKLFDQMKEGHV-------------------------------CPDKYVLSSVLSA 251

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              L  +E G++ H  V++ G+  ++ + N  +  Y KC   +    +F+ M + N V++
Sbjct: 252 CLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSW 311

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           T +++G  +     +AL++F  M R   + D+   +SVL  C   G  V  +        
Sbjct: 312 TTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSC---GSLVALE-------- 360

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+QVH   IK+  + D  + N L+DMYAK   +  A  +F+ +    +VS+N M
Sbjct: 361 -----KGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAM 415

Query: 310 IAGYGQKYQSTKAIELLQRMK-----------------------------------SCGF 334
           I GY ++ +  +A++L + M+                                     G 
Sbjct: 416 IEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGV 475

Query: 335 EPDEVTS---INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
             DE      I++   C R GD    R +F+ +    +  W AM S Y+Q   ++E++KL
Sbjct: 476 SLDEFAGSALIDVYSKCSRVGD---ARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKL 532

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           ++ +Q   +KP+  T A ++++ + +  L  G+Q H   +K     D +VA+ L+ +Y+K
Sbjct: 533 YKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAK 592

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
               E A + F      D  CWNSMIA  + +    +A   F+ M    + P   +F  V
Sbjct: 593 SGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGV 652

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN- 570
           LS+C+       G      + + G    I     ++ +  + G +Y A++F + M  K  
Sbjct: 653 LSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQA 712

Query: 571 TVTWNEMI 578
            V W  ++
Sbjct: 713 AVVWRSLL 720



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 209/453 (46%), Gaps = 82/453 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +H ++LR+G+  D  + N  I+ Y KC+     + LFD+M  K++ SW  +     
Sbjct: 260 GGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTV----- 314

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                     I+  ++N     AL ++ +M+  G+ P      S
Sbjct: 315 --------------------------IAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTS 348

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  +  +L+ +E GR+ H   IK+ +D + +V N L+ +YAKC     A  VF  M+  +
Sbjct: 349 VLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAID 408

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM+ G ++ D++ EAL++FR M     S   +   S+LGV A       S    +
Sbjct: 409 LVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSA-------SLYHLE 461

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
             N         Q+H L IK G   D    ++L+D+Y+K   +  A ++F  + ++ +V 
Sbjct: 462 LSN---------QIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVV 512

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           W  M +GY Q+ ++ ++++L + ++    +P+E T   ++ A                  
Sbjct: 513 WTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVI 572

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              +SG I+   + F S      + WN+M+++Y+Q    ++A++
Sbjct: 573 KMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQ 632

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +F +M   G+KP+  T   +LS+C+  G+L+ G
Sbjct: 633 VFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLG 665



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 4/116 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  H  +++ G  DD F+ N L+++Y+K  +   A   F     KD   WN++++   +
Sbjct: 564 GQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQ 623

Query: 67  SDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
             + E A ++F++M     + N V++  ++SA    GL +     ++ MS  G  P
Sbjct: 624 HGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEP 679


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 249/786 (31%), Positives = 402/786 (51%), Gaps = 103/786 (13%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           ++H  I+  GL  DT+L N LI LYS+                                 
Sbjct: 65  VVHGQIIVWGLELDTYLSNILINLYSRAGG------------------------------ 94

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVF 127
            + +A K+F++MPERN+VSW+ ++SA   +G+ E++L V+ +        P    L+S  
Sbjct: 95  -MVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153

Query: 128 KASTALLDVEHGR----RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +A + L     GR    +    ++K G D+++YV   L+  Y K G   +A  VF+ + E
Sbjct: 154 QACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE 211

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA----REGCGVE 239
            + VT+T M+SG  K  R   +L++F  ++   V  D   LS+VL  C+     EG    
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG---- 267

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                           G+Q+H   ++ G E D  L N L+D Y K G + +A  +F+ +P
Sbjct: 268 ----------------GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------- 348
            ++++SW  +++GY Q     +A+EL   M   G +PD     ++L +C           
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371

Query: 349 VRSGDIKT------------------------GREMFDSMPSPSVSSWNAMLSSYS---- 380
           V +  IK                          R++FD   +  V  +NAM+  YS    
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           Q E H EA+ +FR+M+FR ++P   T   +L + A++  L   KQ+H    K   ++D +
Sbjct: 432 QWELH-EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIF 490

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
             S LI +YS C   + +  VF  +   D+V WNSM AG    S + EA   F +++ + 
Sbjct: 491 AGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSR 550

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
             P +F+FA ++++   L+S   G++ H Q+ K G   + ++ +AL++MY KCG    A 
Sbjct: 551 ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           + FD    ++ V WN +I  YA +G G +A+++ + M++ G++P+ ITFV +L+ACSH+G
Sbjct: 611 KAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAG 670

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           LV+ G++ F  M L  G+EP  +HY CM+  LGRAG  ++A  LI++MP K   ++W  L
Sbjct: 671 LVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL 729

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           LS C    NV LA+ AAE     DPK+S  +++L+NIY+S G W + + VRE M    +V
Sbjct: 730 LSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVV 789

Query: 741 KDPAYS 746
           K+P  S
Sbjct: 790 KEPGRS 795



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 228/515 (44%), Gaps = 90/515 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +HAHILR GL  D  L N LI+ Y KC    +A  LF+ MP+K+I SW  +LS   
Sbjct: 267 GGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS--- 323

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                   YK                     +N L ++A+ ++  MS  G  P     +S
Sbjct: 324 -------GYK---------------------QNALHKEAMELFTSMSKFGLKPDMYACSS 355

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  +  +L  +  G + H   IK  L  + YV N+L+ +YAKC     A  VF+  +  +
Sbjct: 356 ILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAAD 415

Query: 186 EVTFTAMMSGLAKTD---RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
            V F AM+ G ++      + EAL +FR M  + +    ++  S+L   A          
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA---------- 465

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
            + +    S+ +HG     L  K G   D+   ++L+D+Y+    +  + ++F  +  + 
Sbjct: 466 -SLTSLGLSKQIHG-----LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKD 519

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-- 360
           +V WN M AGY Q+ ++ +A+ L   ++     PDE T  NM+ A      ++ G+E   
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHC 579

Query: 361 ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                            FDS  S  V  WN+++SSY+     K+
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKK 639

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA--SHIDNYVASGL 445
           A+++  +M   G++P+  T   +LS+C+  G++E G +     L+       ++YV   +
Sbjct: 640 ALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVC--M 697

Query: 446 IGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           + +  +  R   A  +  ++P +   + W S+++G
Sbjct: 698 VSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732


>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
 gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
          Length = 792

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/780 (30%), Positives = 405/780 (51%), Gaps = 90/780 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKL+H H+LR G   + FL N LI++Y  C   H A+  F         ++ +I +  C 
Sbjct: 61  GKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQ--------NFASIKAVAC- 111

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                +N ++SA  +NGL  +AL +Y++M  EG  P  IT   V
Sbjct: 112 ---------------------YNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIV 150

Query: 127 FKASTALLDVEHGRRCHGLVIKIG--LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
             + +A+  +   R  H  +I+    +  N+ + NAL+++Y KCG  + A  VF+ +   
Sbjct: 151 LGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNR 210

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++T+M+S  A      EAL++++ M    +  DS++ +S L  C             
Sbjct: 211 DAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLAC------------- 257

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 ++ V G+ +H   +    E+D  + ++L++MYA+ GD+ SA   F  +  + VV
Sbjct: 258 ------TKLVDGKAIHARIVSSNMESDF-VGSALINMYARCGDVSSARQAFEKIQNKHVV 310

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
            W  ++  Y Q     +A++L  RM   G   D VT +  L AC   G +K G+ +    
Sbjct: 311 CWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRV 370

Query: 361 ----FDSM---------------------------PSPSVSSWNAMLSSYSQSENHKEAI 389
               F S+                              +V  W AM+S+Y+Q+ + +EA+
Sbjct: 371 FECGFQSLVVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEAL 430

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +L+ +M   G +P+  T + +L++C++ G LE+G ++H     +    +  V + L+ +Y
Sbjct: 431 ELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMY 490

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC   ELA+  F      D+V WN+MI   + + L  EA   ++ M    + P + + A
Sbjct: 491 AKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIA 550

Query: 510 TVLSSCAKLSSSFQ-GRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           + LS+CA +S S Q GR++H+++ K+  + + + V +AL+ MY +CG +  AR  F+ M 
Sbjct: 551 SSLSACA-ISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMG 609

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ ++W  M   YAQ G+ D+ + LY +M+  G++P++ITF +IL  CSH+GL+  GVE
Sbjct: 610 QRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVE 669

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F  MQ +H V PI +H+ CM+D LGR+G   +AE L++ MP + D V W  +L SC+ H
Sbjct: 670 CFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTH 729

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           ++   AKRAA  +  LDP+N++ YSLL++I+++ G   +   V+  M E  + K P  SL
Sbjct: 730 SDADTAKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSL 789



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 203/427 (47%), Gaps = 44/427 (10%)

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           D   Q   +      G+ VH   ++ G   +  L N L+ MY   G++  A   F N   
Sbjct: 46  DELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFAS 105

Query: 301 -RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            ++V  +N M++ YG+     +A+EL  RM   G EPD++T   +L +C   G ++  RE
Sbjct: 106 IKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREARE 165

Query: 360 M-------------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
           +                                     FD + +    SW +M+SSY+ +
Sbjct: 166 IHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANN 225

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               EA+ L+++M   G++PD  T    L +C     L  GK +HA  + +    D +V 
Sbjct: 226 GFCDEALDLYQQMDADGIQPDSITFTSALLACTK---LVDGKAIHARIVSSNMESD-FVG 281

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           S LI +Y++C     A + F +I    +VCW S++          EA   + +M    ++
Sbjct: 282 SALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVH 341

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
               ++ T L +CA L +  +G+ +H+++ + G+   + V +AL+ MY KCG++  AR  
Sbjct: 342 ADGVTYVTALGACASLGALKEGKAIHSRVFECGF-QSLVVHTALLTMYAKCGELDAARAV 400

Query: 563 FDMMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
           F+ +  K N   W  MI  YAQ G+  EA+ LY  M+A G +P++ TF  +L ACS SG 
Sbjct: 401 FNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGD 460

Query: 622 VDVGVEI 628
           ++ G++I
Sbjct: 461 LEAGMKI 467



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 160/353 (45%), Gaps = 32/353 (9%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L  C  +G L  GK VH   L+T    + ++ + LI +Y  C    LA   F     + 
Sbjct: 48  LLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIK 107

Query: 470 IV-CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
            V C+N M++    N L   A   + +M +    P + ++  VL SC+ + S  + R++H
Sbjct: 108 AVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIH 167

Query: 529 AQ-IEKDGYVND-IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           A  IE    + D + + +AL+ MY KCG +  AR+ FD +  ++ V+W  MI  YA NG+
Sbjct: 168 ASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGF 227

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACS--------HSGLVD-------VGVEIFNS 631
            DEA+ LY+ M A G++PD ITF + L AC+        H+ +V        VG  + N 
Sbjct: 228 CDEALDLYQQMDADGIQPDSITFTSALLACTKLVDGKAIHARIVSSNMESDFVGSALINM 287

Query: 632 M-------QLDHGVEPILDH----YTCMIDCLGRAGHFHEAEML---IDEMPCKDDPVIW 677
                         E I +     +T ++    +  H+ EA  L   +D      D V +
Sbjct: 288 YARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTY 347

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
              L +C     ++  K     +F    ++   ++ L  +Y+  G  D  RAV
Sbjct: 348 VTALGACASLGALKEGKAIHSRVFECGFQSLVVHTALLTMYAKCGELDAARAV 400



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/403 (21%), Positives = 174/403 (43%), Gaps = 90/403 (22%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG  +H H+  + L  +  + N L+ +Y+KC +   A+  F+    KD+ SWNA      
Sbjct: 463 AGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNA------ 516

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    +I A  ++GL  +AL +Y  M+++G +P  +T+AS
Sbjct: 517 -------------------------MIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIAS 551

Query: 126 VFKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
              A      ++ GR  H  V+K      ++ V  AL+++Y +CG  + A  +FE+M + 
Sbjct: 552 SLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQR 611

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC---GVESD 241
           + +++TAM S  A+     + L+++  M+   +  + ++ +S+L  C+  G    GVE  
Sbjct: 612 DVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECF 671

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           +  QS+++            + I+  F         ++D+  ++G +  AE +  ++P  
Sbjct: 672 LEMQSEHEV-----------VPIREHFLC-------MVDLLGRSGRLRDAEALVESMP-- 711

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
                                           ++PD V  + +L +C    D  T +   
Sbjct: 712 --------------------------------YQPDSVAWLTVLGSCKTHSDADTAKRAA 739

Query: 362 DSMPS--PSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGVK 401
             +    P  +S  ++LSS ++ +   +EA+++   M+  G+K
Sbjct: 740 RRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLK 782


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/692 (34%), Positives = 363/692 (52%), Gaps = 62/692 (8%)

Query: 70  LEFAYKLFDEMP--ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           L  A  L    P  +  V  WN+LI +   NG   K LS +  M +  + P + T   VF
Sbjct: 75  LSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVF 134

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA   +  V  G   H L    G   N++V NAL+++Y++CG    A  VF+EM   + V
Sbjct: 135 KACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVV 194

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           ++ +++   AK  +   ALEMF  M  +     D ++L +VL  CA  G           
Sbjct: 195 SWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVG----------- 243

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +R++ G+Q H   +      ++ + N L+DMYAK G MD A  +FSN+P + VVSW
Sbjct: 244 ----TRSL-GKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSW 298

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N M+AGY Q  +   A+ L ++M+    + D VT                          
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVT-------------------------- 332

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
                W+A +S Y+Q     EA+ + R+M   G+KP+  TL  +LS CA++G L  GK++
Sbjct: 333 -----WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387

Query: 427 HAASLKTASHI-------DNYVASGLIGIYSKCQRNELAERVFHRI--PELDIVCWNSMI 477
           H  ++K    +       +N V + LI +Y+KC++ ++A  +F  +   E D+V W  MI
Sbjct: 388 HCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMI 447

Query: 478 AGLSLNSLDIEAFMFFKQMRQN--EMYPTQFSFATVLSSCAKLSSSFQGRQVHA-QIEKD 534
            G S +    +A     +M +   +  P  F+ +  L +CA L++   G+Q+HA  +   
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQ 507

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
                +FV + LI+MY KCGDI  AR  FD M  KN VTW  ++ GY  +GYG+EA+ ++
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIF 567

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           ++M   G K D +T + +L ACSHSG++D G+E FN M+ D GV P  +HY C++D LGR
Sbjct: 568 EEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGR 627

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           AG  + A  LI+EMP +  PV+W  LLS CR+H  V L + AA+++  L   N   Y+LL
Sbjct: 628 AGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLL 687

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +N+Y++ GRW D+  +R LM    I K P  S
Sbjct: 688 SNMYANAGRWKDVTRIRSLMRHKGIKKRPGCS 719



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 236/504 (46%), Gaps = 87/504 (17%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           +++  NA+++   +   L  A K+FDEMP  +VVSWN++I +  + G  + AL +++KM+
Sbjct: 161 NVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMT 220

Query: 113 NE-GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
           NE GF P  ITL +V     ++     G++ HG  +   + +N++V N L+ +YAK G  
Sbjct: 221 NEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMM 280

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A  VF  M   + V++ AM++G ++  R  +A+ +F  M  + + +D V+ S+ +   
Sbjct: 281 DEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGY 340

Query: 232 AREGCGVESDVFAQSDNKFSRNV---------------------HGQQVHCLTIKLGFEA 270
           A+ G G E+          S  +                     HG+++HC  IK  +  
Sbjct: 341 AQRGLGYEA--LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--YPM 396

Query: 271 DLH---------LSNSLLDMYAKNGDMDSAEVIFSNL--PERSVVSWNVMIAGYGQKYQS 319
           DL          + N L+DMYAK   +D A  +F +L   ER VV+W VMI GY Q   +
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456

Query: 320 TKAIELLQRM--KSCGFEPDEVTSINMLVAC----------------------------- 348
            KA+ELL  M  + C   P+  T    LVAC                             
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVS 516

Query: 349 -------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                   + GDI   R +FD+M   +  +W ++++ Y      +EA+ +F EM+  G K
Sbjct: 517 NCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFK 576

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG------LIGIYSKCQRN 455
            D  TL ++L +C+  G+++ G + +   +KT    D  V+ G      L+ +  +  R 
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQGME-YFNRMKT----DFGVSPGPEHYACLVDLLGRAGRL 631

Query: 456 ELAERVFHRIP-ELDIVCWNSMIA 478
             A R+   +P E   V W ++++
Sbjct: 632 NAALRLIEEMPMEPPPVVWVALLS 655



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 218/454 (48%), Gaps = 40/454 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  H   + + +  + F+ N L+++Y+K      A  +F  MP KD+ SWNA+++   +
Sbjct: 248 GKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQ 307

Query: 67  SDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
               E A +LF++M E     +VV+W+  IS   + GL  +AL V  +M + G  P  +T
Sbjct: 308 IGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLD--KNIY-----VANALLSLYAKCGWTKHAV 175
           L SV     ++  + HG+  H   IK  +D  KN +     V N L+ +YAKC     A 
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIAR 427

Query: 176 PVFEEMS--EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI--DSVSLSSVLGVC 231
            +F+ +S  E + VT+T M+ G ++     +ALE+   M  +      ++ ++S  L  C
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA-DLHLSNSLLDMYAKNGDMDS 290
           A                  +    G+Q+H   ++    A  L +SN L+DMYAK GD+  
Sbjct: 488 A----------------SLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGD 531

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A ++F N+ E++ V+W  ++ GYG      +A+ + + M+  GF+ D VT + +L AC  
Sbjct: 532 ARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSH 591

Query: 351 SGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           SG I  G E F+ M      SP    +  ++    ++     A++L  EM    ++P   
Sbjct: 592 SGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMP---MEPPPV 648

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
               +LS C   G +E G+       + AS+ D 
Sbjct: 649 VWVALLSCCRIHGKVELGEYAAKKITELASNNDG 682



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 228/520 (43%), Gaps = 87/520 (16%)

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           L+L++ L+  Y   G +  A  +    P  +  V  WN +I  YG   ++ K +     M
Sbjct: 59  LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLM 118

Query: 330 KSCGFEPD------------EVTSI----------------------NMLVACV-RSGDI 354
            S  + PD            E++S+                      N LVA   R G +
Sbjct: 119 HSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSL 178

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSS 413
              R++FD MP   V SWN+++ SY++    K A+++F +M    G +PD  TL  +L  
Sbjct: 179 SDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPP 238

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           CA++G    GKQ H  ++ +    + +V + L+ +Y+K    + A  VF  +P  D+V W
Sbjct: 239 CASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSW 298

Query: 474 NSMIAGLS-----------------------------------LNSLDIEAFMFFKQMRQ 498
           N+M+AG S                                      L  EA    +QM  
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHA-------QIEKDGYVNDIFVGSALIEMYC 551
           + + P + +  +VLS CA + +   G+++H         + K+G+ ++  V + LI+MY 
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYA 418

Query: 552 KCGDIYGARQFFDMMHGK--NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG--VKPDDI 607
           KC  +  AR  FD +  K  + VTW  MI GY+Q+G  ++A+ L  +M       +P+  
Sbjct: 419 KCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478

Query: 608 TFVAILTACSHSGLVDVGVEIFN-SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           T    L AC+    + +G +I   +++      P+     C+ID   + G   +A ++ D
Sbjct: 479 TISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGDIGDARLVFD 537

Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK 706
            M  K++ V W  L++   +H     A    EE+ R+  K
Sbjct: 538 NMMEKNE-VTWTSLMTGYGMHGYGEEALGIFEEMRRIGFK 576


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 246/736 (33%), Positives = 379/736 (51%), Gaps = 70/736 (9%)

Query: 32  LYSKCNNTHSA-----QHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           L+ +C +  SA     Q L   +PH   +  +  L+    +  L    +L        V 
Sbjct: 35  LFHQCKSLASAELIHQQLLVQGLPHDPTHIISMYLTFNSPAKALSVLRRLHPS--SHTVF 92

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
            WN LI   V  G  E  L +Y +M   G+ P H T   V KA   +     G   H +V
Sbjct: 93  WWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVV 152

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE---PNEVTFTAMMSGLAKTDRVV 203
              G + N++V N L+S+Y +CG  ++A  VF+EM E    + V++ ++++   +    +
Sbjct: 153 FASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSI 212

Query: 204 EALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            A++MF  M     +  D+VSL +VL  CA  G              +SR   G+QVH  
Sbjct: 213 RAMKMFERMTEDLGIRPDAVSLVNVLPACASVGA-------------WSR---GKQVHGY 256

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            ++ G   D+ + N+++DMYAK G M+ A  +F  +  + VVSWN M+ GY Q  +   A
Sbjct: 257 ALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDA 316

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
           + L ++++      +E   +N                         V +W+A+++ Y+Q 
Sbjct: 317 LGLFEKIR------EEKIELN-------------------------VVTWSAVIAGYAQR 345

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN--- 439
               EA+ +FR+M+  G +P+  TL  +LS CA  G L  GK+ H  ++K   ++D    
Sbjct: 346 GLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDP 405

Query: 440 ----YVASGLIGIYSKCQRNELAERVFHRIPELD--IVCWNSMIAGLSLNSLDIEAFMFF 493
                V + LI +YSKC+  + A  +F  IP  D  +V W  +I G + +    EA   F
Sbjct: 406 GDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELF 465

Query: 494 KQMRQ--NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND-IFVGSALIEMY 550
            QM Q  N + P  F+ +  L +CA+L +   GRQ+HA + ++ + +  +FV + LI+MY
Sbjct: 466 SQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMY 525

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            K GD+  AR  FD MH +N V+W  ++ GY  +G G+EA++++ +M   G+ PD +TFV
Sbjct: 526 SKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFV 585

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
            +L ACSHSG+VD G+  FN M  D GV P  +HY CM+D L RAG   EA  LI  MP 
Sbjct: 586 VVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPM 645

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
           K  P +W  LLS+CR++ANV L + AA +L  L+  N   Y+LL+NIY++   W D+  +
Sbjct: 646 KPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARI 705

Query: 731 RELMSENCIVKDPAYS 746
           R LM    I K P  S
Sbjct: 706 RYLMKNTGIKKRPGCS 721



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 231/439 (52%), Gaps = 40/439 (9%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H + LR+GLF+D F+ N ++++Y+KC     A  +F++M  KD+ SWNA+++   +
Sbjct: 250 GKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQ 309

Query: 67  SDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
               + A  LF+++ E     NVV+W+ +I+   + GL  +AL V+ +M   G  P  +T
Sbjct: 310 IGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVT 369

Query: 123 LASVFKASTALLDVEHGRR--CHGLVIKIGLDKN-----IYVANALLSLYAKCGWTKHAV 175
           L S+         + HG+   CH +   + LD+N     + V NAL+ +Y+KC   K A 
Sbjct: 370 LVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAAR 429

Query: 176 PVFEEMSEPNE--VTFTAMMSGLAKTDRVVEALEMFRLMIR--KAVSIDSVSLSSVLGVC 231
            +F+ +   +   VT+T ++ G A+     EALE+F  M++    V  ++ ++S  L  C
Sbjct: 430 AMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMAC 489

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE-ADLHLSNSLLDMYAKNGDMDS 290
           AR G             +F     G+Q+H   ++  FE A L ++N L+DMY+K+GD+D+
Sbjct: 490 ARLGA-----------LRF-----GRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDA 533

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A V+F N+ +R+ VSW  ++ GYG   +  +A+++   M+  G  PD VT + +L AC  
Sbjct: 534 ARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSH 593

Query: 351 SGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           SG +  G   F+ M       P    +  M+   S++    EA++L R M    +KP   
Sbjct: 594 SGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMP---MKPTPA 650

Query: 406 TLAIILSSCAAMGILESGK 424
               +LS+C     +E G+
Sbjct: 651 VWVALLSACRVYANVELGE 669


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/726 (31%), Positives = 387/726 (53%), Gaps = 57/726 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+    A+++  CK   LE A K+F+EM ERNVVSW  +IS  V++G   +AL+++ K+ 
Sbjct: 235 DVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLI 294

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             G  P  ++ AS+  A T   D+  G + H  + + GL++ + V NAL+S+Y++CG   
Sbjct: 295 RSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLA 354

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +A  VF+ +   N  T+ AM++G  +   + EA  +FR M +K    D  + +S+L +CA
Sbjct: 355 NARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICA 413

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                      A  D        G+++H      G++ DL ++ +L+ MYAK G  + A 
Sbjct: 414 DR---------ADLD-------RGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEAR 457

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--- 349
            +F+ +PER+V+SWN  I+   +     +A +  ++M+     PD +T I +L +C    
Sbjct: 458 KVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPE 517

Query: 350 --------------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                                           R G++   RE+F  +    + SWNAM++
Sbjct: 518 DLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIA 577

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
           +  Q   +  A  LFR+ +  G K D+ T   +L + A +  L++G+ +H    K     
Sbjct: 578 ANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGK 637

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D  V + LI +YSKC     AE VF  + E D+VCWN+M+A  + +    +A   F+QM+
Sbjct: 638 DIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQ 697

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
              + P   +++T L++CA+L++   G+++HAQ+++ G   D  V ++LIEMY +CG + 
Sbjct: 698 LEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLC 757

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A+Q F+ M  ++  +WN +I GY QNG G+ A+  Y+ M+ + + P+  TF +IL++ +
Sbjct: 758 SAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYA 817

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
             G  +   +   S++ +  +EP   HY  M+  LGRAG   EAE  I+E+  +   ++W
Sbjct: 818 QLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALMW 877

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL---LANIYSSLGRWDDLRAVRELM 734
           E LL +CR+H NV LA+ A E L  LD K  A  ++   L +IY++ GRW+D+  ++  M
Sbjct: 878 ESLLVACRIHLNVELAETAVEHL--LDAKAQASPAVCEQLMSIYAAAGRWEDVSVLKTTM 935

Query: 735 SENCIV 740
            E  +V
Sbjct: 936 QEAGLV 941



 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 217/757 (28%), Positives = 358/757 (47%), Gaps = 86/757 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+   GK +H H+       D +L N LI +YSKC +                       
Sbjct: 114 KSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGS----------------------- 150

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   +E A  +F  M +++VVSWN +IS    +G +++A  ++ +M  EG  P   
Sbjct: 151 --------IEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQN 202

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  S+  A  + + +E G + H  + K G + ++ V+ AL+++Y KCG  + A  VF EM
Sbjct: 203 TFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEM 262

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E N V++TAM+SG  +     EAL +FR +IR  +  + VS +S+LG C          
Sbjct: 263 RERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACT--------- 313

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
               + N       G ++H    + G E ++ + N+L+ MY++ G + +A  +F NL   
Sbjct: 314 ----NPNDLG---EGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSL 366

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
           +  +WN MIAGYG+     +A  L + M+  GF+PD+ T  ++L  C    D+  G+E+ 
Sbjct: 367 NRTTWNAMIAGYGEGLME-EAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELH 425

Query: 361 ----------------------------------FDSMPSPSVSSWNAMLSSYSQSENHK 386
                                             F+ MP  +V SWNA +S   + +  K
Sbjct: 426 SQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGK 485

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA + F++M+   V PD  T   +L+SC +   LE G+ +H    +     +N+VA+ LI
Sbjct: 486 EAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALI 545

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y +C     A  VF+RI   D+  WN+MIA    +  +  AF  F++ R       ++
Sbjct: 546 SMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKY 605

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +F  VL + A L     GR +H  +EK G+  DI V + LI+MY KCG +  A   F  +
Sbjct: 606 TFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTV 665

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             K+ V WN M+  YA +  G +A++L++ M   GV PD  T+   L AC+    V+ G 
Sbjct: 666 QEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGK 725

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           +I   ++ + G+E        +I+   R G    A+ + ++M  +D    W  L++    
Sbjct: 726 KIHAQLK-EAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINS-WNALIAGYCQ 783

Query: 687 HANVRLAKRAAEELFRLD-PKNSAPYSLLANIYSSLG 722
           +    +A    E + R     N A ++ + + Y+ LG
Sbjct: 784 NGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLG 820



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/563 (27%), Positives = 265/563 (47%), Gaps = 83/563 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LHA+I + GL  +  + N LI +YS+C +                            
Sbjct: 321 GLKLHAYIKQAGLEQEVLVGNALISMYSRCGS---------------------------- 352

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L  A ++FD +   N  +WN +I+     GL E+A  ++  M  +GF P   T AS+
Sbjct: 353 ---LANARQVFDNLRSLNRTTWNAMIAGY-GEGLMEEAFRLFRAMEQKGFQPDKFTYASL 408

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                   D++ G+  H  +   G   ++ VA AL+S+YAKCG  + A  VF +M E N 
Sbjct: 409 LAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNV 468

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ A +S   + D   EA + F+ M R  V+ D ++  ++L  C            +  
Sbjct: 469 ISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCT-----------SPE 517

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D +  R +HG+       + G  ++ H++N+L+ MY + G++  A  +F  +  R + SW
Sbjct: 518 DLERGRYIHGK-----INQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSW 572

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
           N MIA   Q   +  A +L ++ +S G + D+ T IN+L A     D+  GR        
Sbjct: 573 NAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEK 632

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +F ++    V  WNAML++Y+ S+  ++A+KL
Sbjct: 633 GGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKL 692

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F++MQ  GV PD +T +  L++CA +  +E GK++HA   +     D  V++ LI +YS+
Sbjct: 693 FQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSR 752

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     A++VF ++   DI  WN++IAG   N     A  +++ M +  + P + +F ++
Sbjct: 753 CGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSI 812

Query: 512 LSSCAKLSSSFQGRQVHAQIEKD 534
           LSS A+L    Q       I+K+
Sbjct: 813 LSSYAQLGEEEQAFDFLESIKKE 835



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 156/283 (55%), Gaps = 4/283 (1%)

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           K A++L  +   RGV+ +    A  L  C     L  GK+VH          D Y+ + L
Sbjct: 85  KGAVQLLGK---RGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNML 141

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YSKC   E A  VF  + + D+V WN+MI+G +L+  D EA   F QM++  + P Q
Sbjct: 142 ISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQ 201

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +F ++LS+C    +   G Q+H++I K GY +D+ V +ALI MYCKCG +  AR+ F+ 
Sbjct: 202 NTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNE 261

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           M  +N V+W  MI GY Q+G   EA+ L++ +I SG++P+ ++F +IL AC++   +  G
Sbjct: 262 MRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEG 321

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           +++   ++   G+E  +     +I    R G    A  + D +
Sbjct: 322 LKLHAYIK-QAGLEQEVLVGNALISMYSRCGSLANARQVFDNL 363



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 180/407 (44%), Gaps = 84/407 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  I + G+  +  + N LI +Y +C N   A+ +F ++                 
Sbjct: 522 GRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRR--------------- 566

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                           R++ SWN +I+A V++G    A  ++ K  +EG      T  +V
Sbjct: 567 ----------------RDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINV 610

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A   L D++ GR  HGLV K G  K+I V   L+ +Y+KCG  + A  VF  + E + 
Sbjct: 611 LRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDV 670

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + AM++  A +DR  +AL++F+ M  + V+ DS + S+ L  CAR             
Sbjct: 671 VCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACAR------------- 717

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +   HG+++H    + G E D  +SNSL++MY++ G + SA+ +F  +  R + SW
Sbjct: 718 ---LTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSW 774

Query: 307 NVMIAGYGQKYQSTKAIELLQRM------------------------------------K 330
           N +IAGY Q  Q   A+E  + M                                    K
Sbjct: 775 NALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKK 834

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVS-SWNAML 376
               EP E     M+ A  R+G +K   E  + + + S +  W ++L
Sbjct: 835 EWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALMWESLL 881


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/706 (32%), Positives = 373/706 (52%), Gaps = 55/706 (7%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           M E NVV W + I+   R GL ++ALS + +M   G  P  IT ++   A          
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
              H L++K G    ++V++ L+S+Y+K    K A  +F++M E ++V++ +M++G ++ 
Sbjct: 61  TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120

Query: 200 DRVVEALEMFRLMIRKA----VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
               EA  +F  MI       + +   +L++VL  C   GC           ++  + VH
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGC-----------SRIGKCVH 169

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G  V     K+GF++DL +S S + MY K G +D A + F  +  + +V+WN MI GY Q
Sbjct: 170 GYAV-----KIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQ 224

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----------------- 358
                +AIEL  +M+  GF+P++ T   +L A     D   GR                 
Sbjct: 225 NCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFV 284

Query: 359 ------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                               F  M   ++ S+NA+++ YS    ++EA++++ ++Q  G+
Sbjct: 285 ATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGM 344

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           +PD  T   + SSC+    +  G QVH  S+K     D  V + ++  YSKC   + A  
Sbjct: 345 EPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALE 404

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
            F  I   + VCW  +I+G + N    +A M F +MR+      +FS ++V+ + +  ++
Sbjct: 405 AFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAA 464

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
             QGR +HA + K G    I+VGSA+I+MY KCG +  A++ F +M  KN V+WN MI G
Sbjct: 465 VEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITG 524

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           YAQNG+  EA+ L+++M +SG+ P  +TFV IL ACSH+GLV+ G   +N M  ++G+ P
Sbjct: 525 YAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPP 584

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
            ++H TCM+D LGRAG+  EAE  +       +P IW  LLS+C +H N  +  RAA+  
Sbjct: 585 SMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHC 644

Query: 701 FRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             L+P  S+ Y+ L+NIY+S   W ++  +R+LM +  + K+P  S
Sbjct: 645 LFLEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCS 690



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 260/558 (46%), Gaps = 86/558 (15%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH  IL+ G  +  F+ + LI +YSK                                D 
Sbjct: 63  LHCLILKKGFSNQLFVSSGLISMYSK-------------------------------HDR 91

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY----NKMSNEGFVPTHITLAS 125
           ++ A  LFD+MPER+ VSWN++I+   + GL E+A  ++    N   N   + +  TLA+
Sbjct: 92  IKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLAT 151

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA   L     G+  HG  +KIG D +++V+ + + +Y KCG    A   F+++   +
Sbjct: 152 VLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKD 211

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +  M++G A+     EA+E+F  M  +    +  +   VL               A 
Sbjct: 212 IVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKAST-----------AM 260

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           SD+   R  H +      +KLG   D+ ++ +L+DMY+K  D++  E  F  + +R++VS
Sbjct: 261 SDSAVGRCFHAK-----VLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVS 315

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------- 358
           +N +I GY    +  +A+ +  +++S G EPD  T + +  +C  S  +  G        
Sbjct: 316 FNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSV 375

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                       E F+S+  P+   W  ++S ++Q+   ++A+ 
Sbjct: 376 KFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALM 435

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            F +M+    K D  + + ++ + ++   +E G+ +HA  +K+      YV S +I +YS
Sbjct: 436 QFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYS 495

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   E A++VF  +PE ++V WNSMI G + N    EA + F++M  + + PT  +F  
Sbjct: 496 KCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVG 555

Query: 511 VLSSCAKLSSSFQGRQVH 528
           +L +C+      +GR  +
Sbjct: 556 ILFACSHAGLVEEGRNFY 573



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 209/456 (45%), Gaps = 82/456 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H + ++ G   D F+    + +Y KC     A   FD++ +KDI +W         
Sbjct: 165 GKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAW--------- 215

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                 N +I+   +N  EE+A+ ++ +M  EGF P   T   V
Sbjct: 216 ----------------------NTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCV 253

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KASTA+ D   GR  H  V+K+G   +++VA AL+ +Y+K    +     F EMS+ N 
Sbjct: 254 LKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNL 313

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+F A+++G +   +  EAL ++  +  + +  DS +   +   C+     V S V    
Sbjct: 314 VSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCS-----VSSTV---- 364

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G QVH  ++K G ++D+ + NS+++ Y+K G  DSA   F ++   + V W
Sbjct: 365 -------AEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCW 417

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
             +I+G+ Q  +  KA+    +M+    + DE +S +++ A      ++ GR        
Sbjct: 418 AGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMK 477

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                      ++F  MP  +V SWN+M++ Y+Q+   KEA+ L
Sbjct: 478 SGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLL 537

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           F+EM   G+ P   T   IL +C+  G++E G+  +
Sbjct: 538 FQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFY 573



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 181/358 (50%), Gaps = 47/358 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  HA +L+ G   D F+   L+++YSK                   Y           
Sbjct: 266 GRCFHAKVLKLGCSMDVFVATALVDMYSK------------------FY----------- 296

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+E   + F EM +RN+VS+N LI+     G  E+AL VY+++ +EG  P   T   +
Sbjct: 297 --DIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGL 354

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F + +    V  G + H   +K GLD ++ V N++++ Y+KCG+T  A+  FE ++ PN 
Sbjct: 355 FSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNS 414

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +  ++SG A+     +AL  F  M +     D  S SSV+                ++
Sbjct: 415 VCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVI----------------KA 458

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            + ++    G+ +H   +K G +  +++ ++++DMY+K G ++ A+ +FS +PE++VVSW
Sbjct: 459 VSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSW 518

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           N MI GY Q     +A+ L Q M S G  P  VT + +L AC  +G ++ GR  ++ M
Sbjct: 519 NSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLM 576



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 32/169 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHAH++++GL    ++ + +I++YSKC     AQ                       
Sbjct: 468 GRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQ----------------------- 504

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+F  MPE+NVVSWN++I+   +NG  ++AL ++ +M++ G +PT +T   +
Sbjct: 505 --------KVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGI 556

Query: 127 FKASTALLDVEHGRRCHGLVI-KIGLDKNIYVANALLSLYAKCGWTKHA 174
             A +    VE GR  + L++   G+  ++     ++ L  + G+ + A
Sbjct: 557 LFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEA 605


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 237/758 (31%), Positives = 391/758 (51%), Gaps = 59/758 (7%)

Query: 30  IELYSKCNN----THSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNV 85
           + L+ +C      T    HLF    H+   +   ++ +  +    E + ++FD  P+ + 
Sbjct: 5   MPLFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDS 64

Query: 86  VSWNNLISALVRNGLEEKALSVYNKMSNEGFVP-THITLASVFKASTALLDVEHGRRCHG 144
             W  LI   V  G  E+A+S+Y++M  +     ++    SV KA +   D+  G + HG
Sbjct: 65  FMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHG 124

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
            VIK G + +  V  +LL +Y +      A   F+ M   + V +++++    +  +  E
Sbjct: 125 RVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASE 184

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
            L+MF  MI +AV  DSV++ SV   C+  G             +  R+VHG       +
Sbjct: 185 GLDMFSQMISEAVEPDSVTMLSVTEACSELG-----------SLRLGRSVHG-----YVV 228

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           +   E++  L+NSL+ MY K GD+ SAE +F N+P R    W  MI+ Y Q     +A+ 
Sbjct: 229 RREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALN 288

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------------------------- 358
           +  +M+    EP++VT + +L AC R G +K GR                          
Sbjct: 289 VFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELY 348

Query: 359 ----------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
                     ++F+++   ++ SWN ++S ++++   +EA+ LF +MQ +G+ PD  +LA
Sbjct: 349 ADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLA 408

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
             LS+C  +   + G Q+H   +KT  + +++V + LI +Y+KC     A ++F +I E 
Sbjct: 409 SSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEK 467

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
            +V WNSMI G S N   +EA   F QM  N +   + +F +V+ +C+ L    +G+ VH
Sbjct: 468 SLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVH 527

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
            ++   G   D ++ +AL +MY KCG++  A   FD M  ++ V+W+ MI GY  +G  +
Sbjct: 528 HKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQIN 587

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
             + L+  M+ SG+KP+DITF+ IL+ACSH+G V+ G   FNSM  + GVEP  DH+ CM
Sbjct: 588 ATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACM 646

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           +D L RAG  + A  +I  +P   +  IW  LL+ CR+H  + + K   + L  +D  ++
Sbjct: 647 VDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADT 706

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             Y+LL+NIY+  G WD    VR +M    + K P YS
Sbjct: 707 GYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYS 744



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 202/454 (44%), Gaps = 84/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H +++R  +  +  L N LI +Y K  + +SA+ LF+ +P +    W         
Sbjct: 220 GRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTP------- 272

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +IS   ++G  ++AL+V+ KM      P  +T+  V
Sbjct: 273 ------------------------MISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGV 308

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNI-YVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A   L  V+ GR  HG VI+  +D  + ++  AL+ LYA  G  +    VFE + E  
Sbjct: 309 LCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKT 368

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++  ++S   +  +  EAL +F  M  + +  DS SL+S L  C        +  F+Q
Sbjct: 369 ILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACG-------TISFSQ 421

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G Q+H   IK G   D  + N+L+DMYAK G + SA  +F  + E+S+V+
Sbjct: 422 L---------GAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEKSLVT 471

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN MI G+ Q   S +AI L  +M     + D++T ++++ AC                 
Sbjct: 472 WNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLI 531

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G+++    +FD M   S+ SW+ M++ Y         I 
Sbjct: 532 MYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATIS 591

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           LF +M   G+KP+  T   ILS+C+  G +E GK
Sbjct: 592 LFNQMLGSGIKPNDITFMHILSACSHAGAVEEGK 625



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 142/307 (46%), Gaps = 49/307 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H +I++ G F+D F+ N LI++Y+KC   HSA  +F+K+  K + +WN+       
Sbjct: 423 GAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNS------- 474

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I    +NG   +A++++++M         +T  SV
Sbjct: 475 ------------------------MICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSV 510

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A + L  +E G+  H  +I  GL K+ Y+  AL  +Y+KCG  + A  VF+ MSE + 
Sbjct: 511 IQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSI 570

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++ M++G     ++   + +F  M+   +  + ++   +L  C+  G   E  ++  S
Sbjct: 571 VSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNS 630

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS- 305
            ++F          C                ++D+ ++ GD++ A  I ++LP  +  S 
Sbjct: 631 MSEFGVEPKHDHFAC----------------MVDLLSRAGDLNGAYQIITSLPFPANSSI 674

Query: 306 WNVMIAG 312
           W  ++ G
Sbjct: 675 WGALLNG 681


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/730 (32%), Positives = 388/730 (53%), Gaps = 53/730 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D++  N +L +  K   +  A  LFD+MP RN+VSW++++S   + G  EKAL  + +  
Sbjct: 74  DVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQ 133

Query: 113 NEGFVP-THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
                      LAS+ +A       E G + H  VIK G  +++YV  +L+ LYAK G  
Sbjct: 134 RTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEI 193

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A  VF+ +     VT+TA+++G  K+ R   +L++F LM+   V  D   LSS+L  C
Sbjct: 194 DKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNAC 253

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           +  G       + +          G+Q+H   ++   + D+   N L+D Y K G + + 
Sbjct: 254 SVLG-------YLKG---------GKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAG 297

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
           + +F  L  ++++SW  MIAGY Q     +A+EL+  M   G++PDE    ++L +C   
Sbjct: 298 KALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSV 357

Query: 352 GDIKTGREM-----------------------------------FDSMPSPSVSSWNAML 376
             ++ GR++                                   FD +   SV  +NAM+
Sbjct: 358 DALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMI 417

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
             YS+      A+++F+EM+ + V P   T   +L   AA+  L+  KQ+H   +K    
Sbjct: 418 EGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFS 477

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
           +D + +S LI +YSKC     A  VF      DIV WNS+ +G +L     EAF  +  +
Sbjct: 478 LDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDL 537

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           + +   P +F+FA + ++ + L+S   G+Q H Q+ K G  +D F+ +AL++MY KCG +
Sbjct: 538 QLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSV 597

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             A + F     K+T  WN MI  YAQ+G  +EA+R+++ M+++ + P+ +TFV++L+AC
Sbjct: 598 EEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSAC 657

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH G V+ G++ +NSM   +G+EP ++HY  ++  LGRAG   EA   I++M  +   ++
Sbjct: 658 SHVGFVEDGLQHYNSMA-RYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALV 716

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W  LLS+CR+  NV LAK AAE    +DP +S  Y +L+NI++S G W D++ +R  M  
Sbjct: 717 WRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDV 776

Query: 737 NCIVKDPAYS 746
           N +VK+P  S
Sbjct: 777 NGVVKEPGQS 786



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 171/615 (27%), Positives = 289/615 (46%), Gaps = 56/615 (9%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           LA++  A  +   + + R+ H  V+  GL  +++++N LL  Y K G    A  +F++M 
Sbjct: 43  LANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMP 102

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVESD 241
             N V++++++S   +     +AL  F    R  V  ++   L+S++  C +   G    
Sbjct: 103 NRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEP-- 160

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                         G QVH   IK GF  D+++  SL+ +YAK+G++D A ++F  L  +
Sbjct: 161 --------------GSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLK 206

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
           + V+W  +I GY +  +S  +++L   M      PD+    ++L AC             
Sbjct: 207 TPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIH 266

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G +K G+ +FD +   ++ SW  M++ Y Q+    
Sbjct: 267 AYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDW 326

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA++L  EM   G KPD    + +L+SC ++  L+ G+Q+H+  +K     DN+V + LI
Sbjct: 327 EAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALI 386

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +YSKC   + A+RVF  +    +V +N+MI G S       A   F++MR   + P+  
Sbjct: 387 DMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFL 446

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +F ++L   A L      +Q+H  I K G+  D F  SALI++Y KC  I  AR  F+  
Sbjct: 447 TFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGT 506

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             K+ V WN +  GY      +EA +LY D+  S  +P++ TF A+ TA S    +  G 
Sbjct: 507 TNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQ 566

Query: 627 EIFNS-MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
           +  N  M++    +P + +   ++D   + G   EAE +      KD    W  ++S   
Sbjct: 567 QFHNQVMKMGLESDPFITN--ALVDMYAKCGSVEEAEKIFSSSVWKDTAC-WNSMISMYA 623

Query: 686 LHANVRLAKRAAEEL 700
            H  V  A R  E +
Sbjct: 624 QHGKVEEALRMFETM 638



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 266/595 (44%), Gaps = 82/595 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H++++++G  +D ++   L+ LY+K               H +I            
Sbjct: 161 GSQVHSYVIKSGFGEDVYVGTSLVVLYAK---------------HGEI------------ 193

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               + A  +FD +  +  V+W  +I+   ++G  E +L ++N M     +P    L+S+
Sbjct: 194 ----DKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSI 249

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + L  ++ G++ H  V++     ++   N L+  Y KCG  K    +F+ +   N 
Sbjct: 250 LNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNI 309

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++T M++G  +     EA+E+   M R     D  + SSVL  C         D     
Sbjct: 310 ISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCG------SVDALQ-- 361

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   HG+Q+H   IK+  E D  ++N+L+DMY+K   +D A+ +F  +   SVV +
Sbjct: 362 --------HGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYY 413

Query: 307 NVMIAGYGQKYQSTKAIELLQRMK-----------------------------------S 331
           N MI GY ++     A+E+ Q M+                                    
Sbjct: 414 NAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIK 473

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
            GF  D+ TS  ++    +   I+  R +F+   +  +  WN++ S Y+     +EA KL
Sbjct: 474 YGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKL 533

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           + ++Q    +P+  T A + ++ + +  L  G+Q H   +K     D ++ + L+ +Y+K
Sbjct: 534 YSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAK 593

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E AE++F      D  CWNSMI+  + +    EA   F+ M  N + P   +F +V
Sbjct: 594 CGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSV 653

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           LS+C+ +     G Q +  + + G    I   ++++ +  + G +  AR+F + M
Sbjct: 654 LSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKM 708


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/783 (30%), Positives = 397/783 (50%), Gaps = 85/783 (10%)

Query: 1   KKAHVAGKLLHAH-ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           KKA   G+ +HAH I  N LF+  FL  RL+ +Y KC                       
Sbjct: 91  KKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCG---------------------- 128

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
                C  D    A KLFD MP + + +WN +I A V NG    +L +Y +M   G    
Sbjct: 129 -----CLVD----AEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLD 179

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             T   + KA   L D  +G   HGL IK G    ++VAN+++ +Y KC     A  +F+
Sbjct: 180 ACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFD 239

Query: 180 EMSEPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            M E  +V ++ +M+S  +   + +EAL +F  M + +++ ++ +  + L  C       
Sbjct: 240 RMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQAC------- 292

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                   D+ F +   G  +H   +K  +  ++ ++N+L+ MYA+ G M  A  IF N+
Sbjct: 293 -------EDSSFIK--QGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNM 343

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG------ 352
            +   +SWN M++G+ Q     +A++    M+  G +PD V  I+++ A  RSG      
Sbjct: 344 DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGM 403

Query: 353 -------------DIKTGREM----------------FDSMPSPSVSSWNAMLSSYSQSE 383
                        D++ G  +                FD MP   V SW  +++ ++Q+ 
Sbjct: 404 QIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNG 463

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
           +H  A++LFRE+Q  G+  D   ++ IL +C+ + ++ S K++H+  ++     D  + +
Sbjct: 464 SHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQN 522

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           G++ +Y +C   + A R+F  I   D+V W SMI+    N L  EA   F  M++  + P
Sbjct: 523 GIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEP 582

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              S  ++LS+ A LS+  +G+++H  + + G+V +  + S L++MY +CG +  +R  F
Sbjct: 583 DSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVF 642

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           + +  K+ V W  MI+ Y  +G G  A+ L++ M    + PD I FVA+L ACSHSGL++
Sbjct: 643 NFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMN 702

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G     SM+ ++ +EP  +HY C++D LGRA H  EA   +  M  +    +W  LL +
Sbjct: 703 EGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGA 762

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           C++H+N  L + AA++L  +DP+N   Y L++N+YS+  RW D+  VR  M  + + K+P
Sbjct: 763 CQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNP 822

Query: 744 AYS 746
             S
Sbjct: 823 GCS 825



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 122/221 (55%), Gaps = 2/221 (0%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDN-YVASGLIGIYSKCQRNELAERVFHRIPEL 468
           +L  C +   L  G+QVHA  + + +  ++ ++++ L+ +Y KC     AE++F  +P  
Sbjct: 84  VLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHK 143

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
            I  WN+MI     N   + +   +++MR + +     +F  +L +C  L     G +VH
Sbjct: 144 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVH 203

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYG 587
               K+GYV+ +FV ++++ MY KC D+ GARQ FD M  K + V+WN MI  Y+ NG  
Sbjct: 204 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 263

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            EA+RL+ +M  + + P+  TFVA L AC  S  +  G+ I
Sbjct: 264 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFI 304



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 7/201 (3%)

Query: 488 EAFMFFKQMRQNEMYPTQFS----FATVLSSCAKLSSSFQGRQVHAQ-IEKDGYVNDIFV 542
           EAF     +  N+  P+QFS    +++VL  C    +  +G+QVHA  I  +   N +F+
Sbjct: 58  EAFQSLTDLFANQS-PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFL 116

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            + L+ MY KCG +  A + FD M  K   TWN MI  Y  NG    ++ LY++M  SG+
Sbjct: 117 STRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGI 176

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
             D  TF  IL AC        G E+ + + +  G   I+     ++    +    + A 
Sbjct: 177 PLDACTFPCILKACGLLKDRRYGAEV-HGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR 235

Query: 663 MLIDEMPCKDDPVIWEVLLSS 683
            L D MP K+D V W  ++S+
Sbjct: 236 QLFDRMPEKEDVVSWNSMISA 256


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 242/776 (31%), Positives = 403/776 (51%), Gaps = 85/776 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G   H  I R GL  D F+   L+++YSK                               
Sbjct: 148 GVWFHGEIDRRGLERDVFIGAGLVDMYSKMG----------------------------- 178

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             DL+ A ++FD+MP+R+VV+WN +I+ L ++    +A+  +  M   G  P+ ++L ++
Sbjct: 179 --DLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNL 236

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F     L ++E  R  HG V +   D +  V+N L+ LY+KCG    A  VF++M + ++
Sbjct: 237 FPGICKLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDD 294

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  MM+G A     VE LE+F  M    V I+ VS  S   + A E   +E       
Sbjct: 295 VSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF-LAAAETIDLEK------ 347

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+++H   ++   ++D+ ++  L+ MYAK G+ + A+ +F  L  R +V+W
Sbjct: 348 ---------GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAW 398

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           + +IA   Q     +A+ L Q M++   +P+ VT +++L AC     +K G+ +      
Sbjct: 399 SAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVK 458

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F+ M S  + +WN++++ Y+Q  +   AI +
Sbjct: 459 ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDM 518

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +++   + PD  T+  ++ +CA +  L+ G  +H   +K     D +V + LI +Y+K
Sbjct: 519 FYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAK 578

Query: 452 CQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           C     AE +F++     D V WN +IA    N    EA   F QMR    +P   +F +
Sbjct: 579 CGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVS 638

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           VL + A L++  +G   HA I + G++++  VG++LI+MY KCG +  + + F+ M  K+
Sbjct: 639 VLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKD 698

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           TV+WN M+ GYA +G+GD A+ L+  M  S V+ D ++FV++L+AC H GLV+ G +IF+
Sbjct: 699 TVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFH 758

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM   + ++P L+HY CM+D LGRAG F E    I  MP + D  +W  LL SCR+H+NV
Sbjct: 759 SMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNV 818

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +L + A + L +L+P+N A + +L++IY+  GRW D    R  M++  + K P  S
Sbjct: 819 KLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCS 874



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 187/656 (28%), Positives = 325/656 (49%), Gaps = 58/656 (8%)

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
           + A  +FD  P  + + WN++I A  R+    +AL +Y  M  +G  P   T   V KA 
Sbjct: 80  DLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKAC 139

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
           T  L+++ G   HG + + GL++++++   L+ +Y+K G  K A  VF++M + + V + 
Sbjct: 140 TGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWN 199

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVESDVFAQSDNK 249
           AM++GL++++   EA++ FR M    V   SVSL ++  G+C              S+ +
Sbjct: 200 AMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKL------------SNIE 247

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
             R++HG        +  F +   +SN L+D+Y+K GD+D A  +F  + ++  VSW  M
Sbjct: 248 LCRSIHG-----YVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTM 300

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---------- 359
           +AGY       + +EL  +MK      ++V++++  +A   + D++ G+E          
Sbjct: 301 MAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRI 360

Query: 360 -------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                    +F  +    + +W+A++++  Q+   +EA+ LF+E
Sbjct: 361 DSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQE 420

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           MQ + +KP+R TL  IL +CA + +L+ GK +H  ++K     D    + L+ +Y+KC  
Sbjct: 421 MQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGF 480

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              A   F+R+   DIV WNS+I G +       A   F ++R + + P   +   V+ +
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVT 573
           CA L+   QG  +H  I K G+ +D  V +ALI+MY KCG +  A   F+     K+ VT
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN +I  Y QNG+  EA+  +  M      P+ +TFV++L A ++      G+  F++  
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACI 659

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           +  G          +ID   + G    +E L +EM  K D V W  +LS   +H +
Sbjct: 660 IQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHK-DTVSWNAMLSGYAVHGH 714



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 167/615 (27%), Positives = 286/615 (46%), Gaps = 59/615 (9%)

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           L SL+ KC   +    VF+    P+ + + +M+    ++ +  EALEM+  M+ K +  D
Sbjct: 72  LYSLFHKCDLAR---SVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPD 128

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
             + + VL  C      ++  V+           HG+       + G E D+ +   L+D
Sbjct: 129 KYTFTFVLKACT-GALNLQEGVW----------FHGE-----IDRRGLERDVFIGAGLVD 172

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MY+K GD+  A  +F  +P+R VV+WN MIAG  Q     +A++  + M+  G EP  V+
Sbjct: 173 MYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVS 232

Query: 341 SINML--------VACVRS-------------------------GDIKTGREMFDSMPSP 367
            +N+         +   RS                         GD+   R +FD M   
Sbjct: 233 LLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQ 292

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
              SW  M++ Y+ +    E ++LF +M+   V+ ++ +      + A    LE GK++H
Sbjct: 293 DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIH 352

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
             +L+     D  VA+ L+ +Y+KC   E A+++F  +   D+V W+++IA L       
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           EA   F++M+  +M P + +  ++L +CA LS    G+ +H    K    +D+  G+AL+
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALV 472

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
            MY KCG    A   F+ M  ++ VTWN +I+GYAQ G    A+ ++  +  S + PD  
Sbjct: 473 SMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAG 532

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           T V ++ AC+    +D G  I + + +  G E        +ID   + G    AE L ++
Sbjct: 533 TMVGVVPACALLNDLDQGTCI-HGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK 591

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
                D V W V++++   + +   AK A     ++  +N  P S+     S L     L
Sbjct: 592 TDFTKDEVTWNVIIAAYMQNGH---AKEAISSFHQMRLENFHPNSV--TFVSVLPAAAYL 646

Query: 728 RAVRELMS-ENCIVK 741
            A RE M+   CI++
Sbjct: 647 AAFREGMAFHACIIQ 661



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 219/460 (47%), Gaps = 40/460 (8%)

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           Q+H   I  GF+   H    L+++Y+     D A  +F + P  S + WN MI  Y +  
Sbjct: 50  QIHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------------------- 349
           Q  +A+E+   M   G EPD+ T   +L AC                             
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168

Query: 350 -------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                  + GD+K  RE+FD MP   V +WNAM++  SQSE+  EA+  FR MQ  GV+P
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
              +L  +      +  +E  + +H    +      + V++GLI +YSKC   ++A RVF
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVF 286

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
            ++ + D V W +M+AG + N   +E    F +M+   +   + S  +   + A+     
Sbjct: 287 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLE 346

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
           +G+++H    +    +DI V + L+ MY KCG+   A+Q F  + G++ V W+ +I    
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALV 406

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           Q GY +EA+ L+++M    +KP+ +T ++IL AC+   L+ +G  I +   +   ++  L
Sbjct: 407 QTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI-HCFTVKADMDSDL 465

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
              T ++    + G F  A    + M  + D V W  L++
Sbjct: 466 STGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLIN 504



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 18/278 (6%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +LSSC  +  L    Q+HA  +  +    ++  + LI +YS   + +LA  VF   P   
Sbjct: 38  LLSSCKHLNPL---LQIHA-QIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPS 93

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
            + WNSMI   + +    EA   +  M +  + P +++F  VL +C    +  +G   H 
Sbjct: 94  RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHG 153

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
           +I++ G   D+F+G+ L++MY K GD+  AR+ FD M  ++ V WN MI G +Q+    E
Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCE 213

Query: 590 AVRLYKDMIASGVKPDDITFVAILTA-CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC- 647
           AV  ++ M   GV+P  ++ + +    C  S      +E+  S+   HG     D  +  
Sbjct: 214 AVDFFRSMQLVGVEPSSVSLLNLFPGICKLS-----NIELCRSI---HGYVFRRDFSSAV 265

Query: 648 ---MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
              +ID   + G    A  + D+M  +DD V W  +++
Sbjct: 266 SNGLIDLYSKCGDVDVARRVFDQMVDQDD-VSWGTMMA 302


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 242/776 (31%), Positives = 404/776 (52%), Gaps = 85/776 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G   H  I R GL  D F+   L+++YSK                               
Sbjct: 148 GVWFHGEIDRRGLERDVFIGAGLVDMYSKMG----------------------------- 178

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             DL+ A ++FD+MP+R+VV+WN +I+ L ++    +A+  +  M   G  P+ ++L ++
Sbjct: 179 --DLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNL 236

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F     L ++E  R  HG V +   D +  V+N L+ LY+KCG    A  VF++M + ++
Sbjct: 237 FPGICKLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDD 294

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  MM+G A     VE LE+F  M    V I+ VS  S   + A E   +E       
Sbjct: 295 VSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF-LAAAETIDLEK------ 347

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+++H   ++   ++D+ ++  L+ MYAK G+ + A+ +F  L  R +V+W
Sbjct: 348 ---------GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAW 398

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           + +IA   Q     +A+ L Q M++   +P+ VT +++L AC     +K G+ +      
Sbjct: 399 SAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVK 458

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F+ M S  + +WN++++ Y+Q  +   AI +
Sbjct: 459 ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDM 518

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +++   + PD  T+  ++ +CA +  L+ G  +H   +K     D +V + LI +Y+K
Sbjct: 519 FYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAK 578

Query: 452 CQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           C     AE +F++     D V WN +IA    N    EA   F QMR    +P   +F +
Sbjct: 579 CGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVS 638

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           VL + A L++  +G   HA I + G++++  VG++LI+MY KCG +  + + F+ M  K+
Sbjct: 639 VLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKD 698

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           TV+WN M+ GYA +G+GD A+ L+  M  S V+ D ++FV++L+AC H+GLV+ G +IF+
Sbjct: 699 TVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFH 758

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM   + ++P L+HY CM+D LGRAG F E    I  MP + D  +W  LL SCR+H+NV
Sbjct: 759 SMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNV 818

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +L + A + L +L+P+N A + +L++IY+  GRW D    R  M++  + K P  S
Sbjct: 819 KLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCS 874



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 187/656 (28%), Positives = 325/656 (49%), Gaps = 58/656 (8%)

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
           + A  +FD  P  + + WN++I A  R+    +AL +Y  M  +G  P   T   V KA 
Sbjct: 80  DLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKAC 139

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
           T  L+++ G   HG + + GL++++++   L+ +Y+K G  K A  VF++M + + V + 
Sbjct: 140 TGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWN 199

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVESDVFAQSDNK 249
           AM++GL++++   EA++ FR M    V   SVSL ++  G+C              S+ +
Sbjct: 200 AMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKL------------SNIE 247

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
             R++HG        +  F +   +SN L+D+Y+K GD+D A  +F  + ++  VSW  M
Sbjct: 248 LCRSIHG-----YVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTM 300

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---------- 359
           +AGY       + +EL  +MK      ++V++++  +A   + D++ G+E          
Sbjct: 301 MAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRI 360

Query: 360 -------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                    +F  +    + +W+A++++  Q+   +EA+ LF+E
Sbjct: 361 DSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQE 420

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           MQ + +KP+R TL  IL +CA + +L+ GK +H  ++K     D    + L+ +Y+KC  
Sbjct: 421 MQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGF 480

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              A   F+R+   DIV WNS+I G +       A   F ++R + + P   +   V+ +
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVT 573
           CA L+   QG  +H  I K G+ +D  V +ALI+MY KCG +  A   F+     K+ VT
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN +I  Y QNG+  EA+  +  M      P+ +TFV++L A ++      G+  F++  
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACI 659

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           +  G          +ID   + G    +E L +EM  K D V W  +LS   +H +
Sbjct: 660 IQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK-DTVSWNAMLSGYAVHGH 714



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 167/615 (27%), Positives = 286/615 (46%), Gaps = 59/615 (9%)

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           L SL+ KC   +    VF+    P+ + + +M+    ++ +  EALEM+  M+ K +  D
Sbjct: 72  LYSLFHKCDLAR---SVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPD 128

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
             + + VL  C      ++  V+           HG+       + G E D+ +   L+D
Sbjct: 129 KYTFTFVLKACT-GALNLQEGVW----------FHGE-----IDRRGLERDVFIGAGLVD 172

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MY+K GD+  A  +F  +P+R VV+WN MIAG  Q     +A++  + M+  G EP  V+
Sbjct: 173 MYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVS 232

Query: 341 SINML--------VACVRS-------------------------GDIKTGREMFDSMPSP 367
            +N+         +   RS                         GD+   R +FD M   
Sbjct: 233 LLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQ 292

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
              SW  M++ Y+ +    E ++LF +M+   V+ ++ +      + A    LE GK++H
Sbjct: 293 DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIH 352

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
             +L+     D  VA+ L+ +Y+KC   E A+++F  +   D+V W+++IA L       
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           EA   F++M+  +M P + +  ++L +CA LS    G+ +H    K    +D+  G+AL+
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALV 472

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
            MY KCG    A   F+ M  ++ VTWN +I+GYAQ G    A+ ++  +  S + PD  
Sbjct: 473 SMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAG 532

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           T V ++ AC+    +D G  I + + +  G E        +ID   + G    AE L ++
Sbjct: 533 TMVGVVPACALLNDLDQGTCI-HGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK 591

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
                D V W V++++   + +   AK A     ++  +N  P S+     S L     L
Sbjct: 592 TDFTKDEVTWNVIIAAYMQNGH---AKEAISSFHQMRLENFHPNSV--TFVSVLPAAAYL 646

Query: 728 RAVRELMS-ENCIVK 741
            A RE M+   CI++
Sbjct: 647 AAFREGMAFHACIIQ 661



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 219/460 (47%), Gaps = 40/460 (8%)

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           Q+H   I  GF+   H    L+++Y+     D A  +F + P  S + WN MI  Y +  
Sbjct: 50  QIHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------------------- 349
           Q  +A+E+   M   G EPD+ T   +L AC                             
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168

Query: 350 -------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                  + GD+K  RE+FD MP   V +WNAM++  SQSE+  EA+  FR MQ  GV+P
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
              +L  +      +  +E  + +H    +      + V++GLI +YSKC   ++A RVF
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVF 286

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
            ++ + D V W +M+AG + N   +E    F +M+   +   + S  +   + A+     
Sbjct: 287 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLE 346

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
           +G+++H    +    +DI V + L+ MY KCG+   A+Q F  + G++ V W+ +I    
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALV 406

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           Q GY +EA+ L+++M    +KP+ +T ++IL AC+   L+ +G  I +   +   ++  L
Sbjct: 407 QTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI-HCFTVKADMDSDL 465

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
              T ++    + G F  A    + M  + D V W  L++
Sbjct: 466 STGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLIN 504



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 18/278 (6%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +LSSC  +  L    Q+HA  +  +    ++  + LI +YS   + +LA  VF   P   
Sbjct: 38  LLSSCKHLNPL---LQIHA-QIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPS 93

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
            + WNSMI   + +    EA   +  M +  + P +++F  VL +C    +  +G   H 
Sbjct: 94  RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHG 153

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
           +I++ G   D+F+G+ L++MY K GD+  AR+ FD M  ++ V WN MI G +Q+    E
Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCE 213

Query: 590 AVRLYKDMIASGVKPDDITFVAILTA-CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC- 647
           AV  ++ M   GV+P  ++ + +    C  S      +E+  S+   HG     D  +  
Sbjct: 214 AVDFFRSMQLVGVEPSSVSLLNLFPGICKLS-----NIELCRSI---HGYVFRRDFSSAV 265

Query: 648 ---MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
              +ID   + G    A  + D+M  +DD V W  +++
Sbjct: 266 SNGLIDLYSKCGDVDVARRVFDQMVDQDD-VSWGTMMA 302


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 245/736 (33%), Positives = 378/736 (51%), Gaps = 70/736 (9%)

Query: 32  LYSKCNNTHSA-----QHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           L+ +C +  SA     Q L   +PH   +  +  L+    +  L    +L        V 
Sbjct: 54  LFHQCKSLASAELTHQQLLVQGLPHDPTHIISMYLTFNSPAKALSVLRRLHPS--SHTVF 111

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
            WN LI   V  G  E  L +Y +M   G+ P H T   V KA   +     G   H +V
Sbjct: 112 WWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVV 171

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE---PNEVTFTAMMSGLAKTDRVV 203
              G + N++V N L+S+Y +CG  ++A  VF+EM E    + V++ ++++   +    +
Sbjct: 172 FASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSI 231

Query: 204 EALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            A++MF  M     +  D+VSL +VL  CA  G              +SR   G+QVH  
Sbjct: 232 RAMKMFERMTEDLGIRPDAVSLVNVLPACASVGA-------------WSR---GKQVHGY 275

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            ++ G   D+ + N+++DMYAK G M+ A  +F  +  + VVSWN M+ GY Q  +   A
Sbjct: 276 ALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDA 335

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
           + L ++++      +E   +N                         V +W+A+++ Y+Q 
Sbjct: 336 LGLFEKIR------EEKIELN-------------------------VVTWSAVIAGYAQR 364

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN--- 439
               EA+ +FR+M   G +P+  TL  +LS CA+ G L  GK+ H  ++K   ++D    
Sbjct: 365 GLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDP 424

Query: 440 ----YVASGLIGIYSKCQRNELAERVFHRIPELD--IVCWNSMIAGLSLNSLDIEAFMFF 493
                V + LI +YSKC+  + A  +F  IP  D  +V W  +I G + +    EA   F
Sbjct: 425 GDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELF 484

Query: 494 KQMRQ--NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND-IFVGSALIEMY 550
            QM Q  N + P  F+ +  L +CA+L +   GRQ+HA + ++ + +  +FV + LI+MY
Sbjct: 485 SQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMY 544

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            K GD+  AR  FD MH +N V+W  ++ GY  +G G+EA++++ +M    + PD +TFV
Sbjct: 545 SKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFV 604

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
            +L ACSHSG+VD G+  FN M  D GV P  +HY CM+D L RAG   EA  LI  MP 
Sbjct: 605 VVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPM 664

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
           K  P +W  LLS+CR++ANV L + AA +L  L+  N   Y+LL+NIY++   W D+  +
Sbjct: 665 KPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARI 724

Query: 731 RELMSENCIVKDPAYS 746
           R LM    I K P  S
Sbjct: 725 RYLMKNTGIKKRPGCS 740



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 231/439 (52%), Gaps = 40/439 (9%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H + LR+GLF+D F+ N ++++Y+KC     A  +F++M  KD+ SWNA+++   +
Sbjct: 269 GKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQ 328

Query: 67  SDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
               + A  LF+++ E     NVV+W+ +I+   + GL  +AL V+ +M   G  P  +T
Sbjct: 329 IGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVT 388

Query: 123 LASVFKASTALLDVEHGRR--CHGLVIKIGLDKN-----IYVANALLSLYAKCGWTKHAV 175
           L S+     +   + HG+   CH +   + LD+N     + V NAL+ +Y+KC   K A 
Sbjct: 389 LVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAAR 448

Query: 176 PVFEEMSEPNE--VTFTAMMSGLAKTDRVVEALEMFRLMIR--KAVSIDSVSLSSVLGVC 231
            +F+ +   +   VT+T ++ G A+     EALE+F  M++    V  ++ ++S  L  C
Sbjct: 449 AMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMAC 508

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE-ADLHLSNSLLDMYAKNGDMDS 290
           AR G             +F     G+Q+H   ++  FE A L ++N L+DMY+K+GD+D+
Sbjct: 509 ARLGA-----------LRF-----GRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDA 552

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A V+F N+ +R+ VSW  ++ GYG   +  +A+++   M+     PD VT + +L AC  
Sbjct: 553 ARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSH 612

Query: 351 SGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           SG +  G   F+ M       P    +  M+   S++    EA++L R M    +KP   
Sbjct: 613 SGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMP---MKPTPA 669

Query: 406 TLAIILSSCAAMGILESGK 424
               +LS+C     +E G+
Sbjct: 670 VWVALLSACRVYANVELGE 688



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 226/490 (46%), Gaps = 107/490 (21%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK---DIYSWNAILSA 63
           G  +HA +  +G   + F+ N L+ +Y +C    +A+ +FD+M  +   D+ SWN+I++A
Sbjct: 164 GASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAA 223

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             +  D   A K+F+ M E                              + G  P  ++L
Sbjct: 224 YMQGGDSIRAMKMFERMTE------------------------------DLGIRPDAVSL 253

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +V  A  ++     G++ HG  ++ GL ++++V NA++ +YAKCG  + A  VFE M  
Sbjct: 254 VNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKV 313

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DV 242
            + V++ AM++G ++  R  +AL +F  +  + + ++ V+ S+V+   A+ G G E+ DV
Sbjct: 314 KDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDV 373

Query: 243 FAQ-----SDNKFSRNV-------------HGQQVHCLTIKLGFEA-------DLHLSNS 277
           F Q     S+      V             HG++ HC  IK            DL + N+
Sbjct: 374 FRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINA 433

Query: 278 LLDMYAKNGDMDSAEVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           L+DMY+K     +A  +F  +P  +RSVV+W V+I G  Q  ++ +A+EL  +M     +
Sbjct: 434 LIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM----LQ 489

Query: 336 PDEVTSIN------MLVACVR------------------------------------SGD 353
           PD     N       L+AC R                                    SGD
Sbjct: 490 PDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGD 549

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           +   R +FD+M   +  SW ++++ Y      +EA+++F EMQ   + PD  T  ++L +
Sbjct: 550 VDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYA 609

Query: 414 CAAMGILESG 423
           C+  G+++ G
Sbjct: 610 CSHSGMVDQG 619


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/702 (33%), Positives = 367/702 (52%), Gaps = 55/702 (7%)

Query: 81  PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           P  NV  WN++I AL  NGL  +ALS+Y++       P   T  SV  A   LLD E  +
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
             H  V+ +G   ++Y+ NAL+ +Y +      A  VFEEM   + V++ +++SG     
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 254

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              EALE++       V  DS ++SSVL  C   G   E D+                +H
Sbjct: 255 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDI----------------IH 298

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            L  K+G + D+ ++N LL MY K   +     IF  +  R  VSWN MI GY Q     
Sbjct: 299 GLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYE 358

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------------- 358
           ++I+L   M +  F+PD +T  ++L AC   GD++ G+                      
Sbjct: 359 ESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI 417

Query: 359 -------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                        E+F  M      SWN+M++ Y Q+ +  EA+KLF+ M+   VKPD  
Sbjct: 418 NMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSV 476

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T  ++LS    +G L  GK++H    K   + +  V++ L+ +Y+KC     + +VF  +
Sbjct: 477 TYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENM 536

Query: 466 PELDIVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
              DI+ WN++IA   ++S D         +MR   + P   +  ++L  C+ L++  QG
Sbjct: 537 KARDIITWNTIIAS-CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQG 595

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           +++H  I K G  +D+ VG+ LIEMY KCG +  + Q F +M  K+ VTW  +I      
Sbjct: 596 KEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMY 655

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G G +AVR + +M A+G+ PD + FVAI+ ACSHSGLV+ G+  F+ M+ D+ +EP ++H
Sbjct: 656 GEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEH 715

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y C++D L R+    +AE  I  MP K D  IW  LLS+CR+  +  +A+R +E +  L+
Sbjct: 716 YACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELN 775

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           P ++  Y L++N+Y++LG+WD +R++R+ +    + KDP  S
Sbjct: 776 PDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCS 817



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 172/616 (27%), Positives = 284/616 (46%), Gaps = 60/616 (9%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            +S+ +A  +        + H L+I +GL  ++  +  L++ YA       +  VF   S
Sbjct: 75  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 134

Query: 183 EPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
             N V  + +++  L       EAL ++    R  +  D+ +  SV+  CA         
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA--------- 185

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                D + ++++H +      + +GF +DL++ N+L+DMY +  D+D A  +F  +P R
Sbjct: 186 --GLLDFEMAKSIHDR-----VLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR 238

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----VRSGDI-- 354
            VVSWN +I+GY       +A+E+  R ++ G  PD  T  ++L AC     V  GDI  
Sbjct: 239 DVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIH 298

Query: 355 ----------------------------KTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                         GR +FD M      SWN M+  YSQ   ++
Sbjct: 299 GLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYE 358

Query: 387 EAIKLFREM--QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
           E+IKLF EM  QF   KPD  T+  IL +C  +G LE GK VH   + +    D   ++ 
Sbjct: 359 ESIKLFMEMVNQF---KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI 415

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI +Y+KC     ++ VF  +   D V WNSMI     N    EA   FK M+  ++ P 
Sbjct: 416 LINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPD 474

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
             ++  +LS   +L     G+++H  + K G+ ++I V + L++MY KCG++  + + F+
Sbjct: 475 SVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFE 534

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            M  ++ +TWN +I     +   +  +R+   M   GV PD  T ++IL  CS       
Sbjct: 535 NMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQ 594

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G EI   +    G+E  +     +I+   + G    +  +   M  K D V W  L+S+C
Sbjct: 595 GKEIHGCI-FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISAC 652

Query: 685 RLHANVRLAKRAAEEL 700
            ++   + A RA  E+
Sbjct: 653 GMYGEGKKAVRAFGEM 668



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 162/599 (27%), Positives = 290/599 (48%), Gaps = 57/599 (9%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y  NA++   C+ +DL+ A K+F+EMP R+VVSWN+LIS    NG   +AL +Y +  
Sbjct: 208 DLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFR 267

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           N G VP   T++SV +A   L  VE G   HGL+ KIG+ K++ V N LLS+Y K     
Sbjct: 268 NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLI 327

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
               +F++M   + V++  M+ G ++     E++++F  M+ +    D ++++S+L  C 
Sbjct: 328 DGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACG 386

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G           D +F     G+ VH   I  G+E D   SN L++MYAK G++ +++
Sbjct: 387 HLG-----------DLEF-----GKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQ 430

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +FS +  +  VSWN MI  Y Q     +A++L + MK+   +PD VT + +L    + G
Sbjct: 431 EVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKT-DVKPDSVTYVMLLSMSTQLG 489

Query: 353 DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
           D+  G+E+                                   F++M +  + +WN +++
Sbjct: 490 DLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIA 549

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
           S   SE+    +++   M+  GV PD  T+  IL  C+ +     GK++H    K     
Sbjct: 550 SCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLES 609

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D  V + LI +YSKC     + +VF  +   D+V W ++I+   +     +A   F +M 
Sbjct: 610 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEME 669

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND-IFVGSALIEMYCKCGDI 556
              + P   +F  ++ +C+      +G     +++KD  +   I   + ++++  +   +
Sbjct: 670 AAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALL 729

Query: 557 YGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
             A  F   M  K ++  W  ++     +G  + A R+ + +I   + PDD  +  +++
Sbjct: 730 DKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIE--LNPDDTGYYVLVS 786



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/573 (23%), Positives = 252/573 (43%), Gaps = 93/573 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G ++H  I + G+  D  + N L+ +Y K N     + +FDKM  +D  SWN        
Sbjct: 294 GDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNT------- 346

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I    + GL E+++ ++ +M N+ F P  +T+ S+
Sbjct: 347 ------------------------MICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSI 381

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A   L D+E G+  H  +I  G + +   +N L+++YAKCG    +  VF  M   + 
Sbjct: 382 LQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDS 441

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +M++   +     EA+++F++M +  V  DSV+   +L +  + G     D+    
Sbjct: 442 VSWNSMINVYIQNGSFDEAMKLFKMM-KTDVKPDSVTYVMLLSMSTQLG-----DLXL-- 493

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+++HC   K+GF +++ +SN+L+DMYAK G+M  +  +F N+  R +++W
Sbjct: 494 ---------GKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITW 544

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           N +IA           + ++ RM++ G  PD  T +++L  C                  
Sbjct: 545 NTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK 604

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G ++   ++F  M +  V +W A++S+       K+A++ 
Sbjct: 605 LGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRA 664

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH---AASLKTASHIDNYVASGLIGI 448
           F EM+  G+ PD      I+ +C+  G++E G           K    I++Y    ++ +
Sbjct: 665 FGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYAC--VVDL 722

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
            S+    + AE     +P + D   W ++++   ++  D E      + R  E+ P    
Sbjct: 723 LSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSG-DTEIAQRVSE-RIIELNPDDTG 780

Query: 508 FATVLSSC-AKLSSSFQGRQVHAQIEKDGYVND 539
           +  ++S+  A L    Q R +   I+  G   D
Sbjct: 781 YYVLVSNVYAALGKWDQVRSIRKSIKARGLKKD 813


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/714 (33%), Positives = 369/714 (51%), Gaps = 56/714 (7%)

Query: 73  AYKLFDEMPERNVVS---WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI--TLASVF 127
           A  +F  +P     S   WN LI      G    A+  Y KM +    P+    TL  V 
Sbjct: 89  AVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVV 148

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K+  AL  +  GR  H     IGL  ++YV +AL+ +YA  G   +A   F+ + E + V
Sbjct: 149 KSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCV 208

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            +  MM G  K   V  A+ +FR M       +  +L+  L VCA      ++D+ +   
Sbjct: 209 LWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCA-----TDADLLS--- 260

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G Q+H L +K G E ++ ++N+LL MYAK   +D A  +F  +P+  +V+WN
Sbjct: 261 --------GAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWN 312

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-------------------- 347
            MI+G  Q     +A  L   M+  G  PD +T +++L A                    
Sbjct: 313 GMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRN 372

Query: 348 CV---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
           CV               +  D++  + ++D+  +  V   + M+S Y  +   +EA+++F
Sbjct: 373 CVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMF 432

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           R +  + +KP+  T+A +L  CA+M  L  G+Q+H   L+ A     YV S L+ +Y+KC
Sbjct: 433 RYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKC 492

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
            R +L+  +F ++ + D V WNSMI+  S N    EA   F+QM    +     + +  L
Sbjct: 493 GRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAAL 552

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           S+CA L + + G+++H    K     DIF  SALI+MY KCG++  A + F+ M  KN V
Sbjct: 553 SACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEV 612

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +WN +I  Y  +G   E+V L   M   G KPD +TF+A+++AC+H+GLV+ GV++F  M
Sbjct: 613 SWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCM 672

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
              + + P ++H+ CM+D   R+G   +A   I +MP K D  IW  LL +CR+H NV L
Sbjct: 673 TKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVEL 732

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A  A++ELF+LDP NS  Y L++NI +  GRWD +  VR LM +N I+K P YS
Sbjct: 733 ADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYS 786



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 262/565 (46%), Gaps = 53/565 (9%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y  +A++     +  L  A   FD +PER+ V WN ++   ++ G  + A+ ++  M 
Sbjct: 175 DVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMR 234

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             G  P   TLA          D+  G + H L +K GL+  + VAN LL++YAKC    
Sbjct: 235 ASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLD 294

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +FE M + + VT+  M+SG  +    VEA  +F  M R     DS++L S+L    
Sbjct: 295 DAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLP--- 351

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                      A +D    +   G++VH   ++     D+ L ++L+D+Y K  D+  A+
Sbjct: 352 -----------ALTDLNGLK--QGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQ 398

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            ++       VV  + MI+GY     S +A+++ + +     +P+ VT  ++L  C    
Sbjct: 399 NLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMA 458

Query: 353 DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
            +  G+++                                   F  M      +WN+M+S
Sbjct: 459 ALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMIS 518

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
           S+SQ+   +EA+ LFR+M   G+K +  T++  LS+CA++  +  GK++H  ++K     
Sbjct: 519 SFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKA 578

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D +  S LI +Y+KC   ELA RVF  +P+ + V WNS+I+    + L  E+      M+
Sbjct: 579 DIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQ 638

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDI 556
           +    P   +F  ++S+CA      +G Q+   + K   +       A ++++Y + G +
Sbjct: 639 EEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKL 698

Query: 557 YGARQFF-DMMHGKNTVTWNEMIHG 580
             A QF  DM    +   W  ++H 
Sbjct: 699 DKAIQFIADMPFKPDAGIWGALLHA 723



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 214/413 (51%), Gaps = 55/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +I+RN +  D FL + L+++Y KC +   AQ+                      
Sbjct: 362 GKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQN---------------------- 399

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    L+D     +VV  + +IS  V NG+ E+AL ++  +  +   P  +T+ASV
Sbjct: 400 ---------LYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASV 450

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                ++  +  G++ HG V++   ++  YV +AL+ +YAKCG    +  +F +MS+ +E
Sbjct: 451 LPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDE 510

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+ +M+S  ++  +  EAL++FR M  + +  +++++S+ L  CA              
Sbjct: 511 VTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACA-------------- 556

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   +G+++H +TIK   +AD+   ++L+DMYAK G+++ A  +F  +P+++ VSW
Sbjct: 557 --SLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSW 614

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N +I+ YG      +++ LL  M+  G++PD VT + ++ AC  +G ++ G ++F  M  
Sbjct: 615 NSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTK 674

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               +P +  +  M+  YS+S    +AI+   +M F   KPD      +L +C
Sbjct: 675 KYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPF---KPDAGIWGALLHAC 724



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 235/512 (45%), Gaps = 88/512 (17%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           ++G  LH+  ++ GL  +  + N L+ +Y+KC     A  LF+ MP  D+ +WN      
Sbjct: 259 LSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNG----- 313

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +IS  V+NGL  +A  ++  M   G  P  ITL 
Sbjct: 314 --------------------------MISGCVQNGLFVEAFGLFYDMQRSGARPDSITLV 347

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  A T L  ++ G+  HG +++  ++ ++++ +AL+ +Y KC   + A  +++     
Sbjct: 348 SLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAI 407

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V  + M+SG        EAL+MFR ++ + +  ++V+++SVL  CA            
Sbjct: 408 DVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCA------------ 455

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 +    GQQ+H   ++  +E   ++ ++L+DMYAK G +D +  IF  + ++  V
Sbjct: 456 ----SMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEV 511

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           +WN MI+ + Q  +  +A++L ++M   G + + +T    L AC     I  G+E+    
Sbjct: 512 TWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVT 571

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          F+ MP  +  SWN+++S+Y      KE++
Sbjct: 572 IKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESV 631

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK---TASHIDNYVASGLI 446
            L   MQ  G KPD  T   ++S+CA  G++E G Q+     K    A  ++++    ++
Sbjct: 632 SLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFAC--MV 689

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMI 477
            +YS+  + + A +    +P + D   W +++
Sbjct: 690 DLYSRSGKLDKAIQFIADMPFKPDAGIWGALL 721



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 143/286 (50%), Gaps = 10/286 (3%)

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHID-NYVA--SGLIGIYSKCQRNELAERVFH 463
           L  +L  C +   L  G Q+HA ++ + +  D N++A  + L+G+Y   +R   A  VF 
Sbjct: 35  LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 464 RIPELDI---VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ--FSFATVLSSCAKL 518
            +P       + WN +I G +       A +F+ +M  +   P+    +   V+ SCA L
Sbjct: 95  ALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
            +   GR VH      G  ND++VGSAL++MY   G +  AR  FD +  ++ V WN M+
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMM 214

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            G  + G  D AVRL+++M ASG +P+  T    L+ C+    +  G ++ +S+ +  G+
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQL-HSLAVKCGL 273

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           EP +     ++    +     +A  L + MP +DD V W  ++S C
Sbjct: 274 EPEVAVANTLLAMYAKCQCLDDAWRLFELMP-QDDLVTWNGMISGC 318


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/702 (33%), Positives = 367/702 (52%), Gaps = 55/702 (7%)

Query: 81  PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           P  NV  WN++I AL  NGL  +ALS+Y++       P   T  SV  A   LLD E  +
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
             H  V+ +G   ++Y+ NAL+ +Y +      A  VFEEM   + V++ +++SG     
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              EALE++       V  DS ++SSVL  C   G   E D+                +H
Sbjct: 196 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDI----------------IH 239

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            L  K+G + D+ ++N LL MY K   +     IF  +  R  VSWN MI GY Q     
Sbjct: 240 GLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYE 299

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------------- 358
           ++I+L   M +  F+PD +T  ++L AC   GD++ G+                      
Sbjct: 300 ESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI 358

Query: 359 -------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                        E+F  M      SWN+M++ Y Q+ +  EA+KLF+ M+   VKPD  
Sbjct: 359 NMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSV 417

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T  ++LS    +G L  GK++H    K   + +  V++ L+ +Y+KC     + +VF  +
Sbjct: 418 TYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENM 477

Query: 466 PELDIVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
              DI+ WN++IA   ++S D         +MR   + P   +  ++L  C+ L++  QG
Sbjct: 478 KARDIITWNTIIAS-CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQG 536

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           +++H  I K G  +D+ VG+ LIEMY KCG +  + Q F +M  K+ VTW  +I      
Sbjct: 537 KEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMY 596

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G G +AVR + +M A+G+ PD + FVAI+ ACSHSGLV+ G+  F+ M+ D+ +EP ++H
Sbjct: 597 GEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEH 656

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y C++D L R+    +AE  I  MP K D  IW  LLS+CR+  +  +A+R +E +  L+
Sbjct: 657 YACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELN 716

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           P ++  Y L++NIY++LG+WD +R++R+ +    + KDP  S
Sbjct: 717 PDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCS 758



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 172/616 (27%), Positives = 284/616 (46%), Gaps = 60/616 (9%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            +S+ +A  +        + H L+I +GL  ++  +  L++ YA       +  VF   S
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75

Query: 183 EPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
             N V  + +++  L       EAL ++    R  +  D+ +  SV+  CA         
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA--------- 126

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                D + ++++H +      + +GF +DL++ N+L+DMY +  D+D A  +F  +P R
Sbjct: 127 --GLLDFEMAKSIHDR-----VLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR 179

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----VRSGDI-- 354
            VVSWN +I+GY       +A+E+  R ++ G  PD  T  ++L AC     V  GDI  
Sbjct: 180 DVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIH 239

Query: 355 ----------------------------KTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                         GR +FD M      SWN M+  YSQ   ++
Sbjct: 240 GLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYE 299

Query: 387 EAIKLFREM--QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
           E+IKLF EM  QF   KPD  T+  IL +C  +G LE GK VH   + +    D   ++ 
Sbjct: 300 ESIKLFMEMVNQF---KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI 356

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI +Y+KC     ++ VF  +   D V WNSMI     N    EA   FK M+  ++ P 
Sbjct: 357 LINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPD 415

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
             ++  +LS   +L     G+++H  + K G+ ++I V + L++MY KCG++  + + F+
Sbjct: 416 SVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFE 475

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            M  ++ +TWN +I     +   +  +R+   M   GV PD  T ++IL  CS       
Sbjct: 476 NMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQ 535

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G EI   +    G+E  +     +I+   + G    +  +   M  K D V W  L+S+C
Sbjct: 536 GKEIHGCI-FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISAC 593

Query: 685 RLHANVRLAKRAAEEL 700
            ++   + A RA  E+
Sbjct: 594 GMYGEGKKAVRAFGEM 609



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 162/599 (27%), Positives = 290/599 (48%), Gaps = 57/599 (9%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y  NA++   C+ +DL+ A K+F+EMP R+VVSWN+LIS    NG   +AL +Y +  
Sbjct: 149 DLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFR 208

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           N G VP   T++SV +A   L  VE G   HGL+ KIG+ K++ V N LLS+Y K     
Sbjct: 209 NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLI 268

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
               +F++M   + V++  M+ G ++     E++++F  M+ +    D ++++S+L  C 
Sbjct: 269 DGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACG 327

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G           D +F     G+ VH   I  G+E D   SN L++MYAK G++ +++
Sbjct: 328 HLG-----------DLEF-----GKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQ 371

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +FS +  +  VSWN MI  Y Q     +A++L + MK+   +PD VT + +L    + G
Sbjct: 372 EVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKT-DVKPDSVTYVMLLSMSTQLG 430

Query: 353 DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
           D+  G+E+                                   F++M +  + +WN +++
Sbjct: 431 DLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIA 490

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
           S   SE+    +++   M+  GV PD  T+  IL  C+ +     GK++H    K     
Sbjct: 491 SCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLES 550

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D  V + LI +YSKC     + +VF  +   D+V W ++I+   +     +A   F +M 
Sbjct: 551 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEME 610

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND-IFVGSALIEMYCKCGDI 556
              + P   +F  ++ +C+      +G     +++KD  +   I   + ++++  +   +
Sbjct: 611 AAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALL 670

Query: 557 YGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
             A  F   M  K ++  W  ++     +G  + A R+ + +I   + PDD  +  +++
Sbjct: 671 DKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIE--LNPDDTGYYVLVS 727



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 143/622 (22%), Positives = 272/622 (43%), Gaps = 100/622 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G ++H  I + G+  D  + N L+ +Y K N     + +FDKM  +D  SWN        
Sbjct: 235 GDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNT------- 287

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I    + GL E+++ ++ +M N+ F P  +T+ S+
Sbjct: 288 ------------------------MICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSI 322

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A   L D+E G+  H  +I  G + +   +N L+++YAKCG    +  VF  M   + 
Sbjct: 323 LQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDS 382

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +M++   +     EA+++F++M +  V  DSV+   +L +  + G           
Sbjct: 383 VSWNSMINVYIQNGSFDEAMKLFKMM-KTDVKPDSVTYVMLLSMSTQLG----------- 430

Query: 247 DNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                 ++H G+++HC   K+GF +++ +SN+L+DMYAK G+M  +  +F N+  R +++
Sbjct: 431 ------DLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIIT 484

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN +IA           + ++ RM++ G  PD  T +++L  C                 
Sbjct: 485 WNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIF 544

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G ++   ++F  M +  V +W A++S+       K+A++
Sbjct: 545 KLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVR 604

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH---AASLKTASHIDNYVASGLIG 447
            F EM+  G+ PD      I+ +C+  G++E G           K    I++Y    ++ 
Sbjct: 605 AFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYAC--VVD 662

Query: 448 IYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
           + S+    + AE     +P + D   W ++++   ++  D E      + R  E+ P   
Sbjct: 663 LLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSG-DTEIAERVSE-RIIELNPDDT 720

Query: 507 SFATVLSSC-AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +  ++S+  A L    Q R +   I+  G   D   G + +E+  K        +FF+ 
Sbjct: 721 GYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKD--PGCSWMEIQNKVYVFGTGTKFFEQ 778

Query: 566 MHGKNTVTWNEMIHGY-AQNGY 586
               N +    M+ G  A+ GY
Sbjct: 779 FEEVNKLL--GMLAGLMAKEGY 798


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/655 (34%), Positives = 360/655 (54%), Gaps = 63/655 (9%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           G+  H  ++  G   + +++N LL++Y+KCG    A  VF+   E + VT+ A++   A 
Sbjct: 96  GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 155

Query: 199 T-----DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           +         E L +FRL+     S   ++L+ VL +C   GC     ++A         
Sbjct: 156 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGC-----LWA--------- 201

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
              + VH   IK+G E D+ +S +L+++Y+K G M  A ++F  + ER VV WN+M+ GY
Sbjct: 202 --AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGY 259

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD-------------IKTG--- 357
            Q     +A +L       G  PDE +   +L  C+ +G              +K+G   
Sbjct: 260 VQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDS 319

Query: 358 ---------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                RE+F+ M    + SWN+M+SS +QS   +E++ LF ++ 
Sbjct: 320 DVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLL 379

Query: 397 FRGVKPDRTTLAIIL-----SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
             G+KPD  TLA I       +C  + +L+ GKQ+HA ++K     D +V SG++ +Y K
Sbjct: 380 HEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIK 439

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     A  VF+ I   D V W SMI+G   N  + +A   + +MRQ+ + P +++FAT+
Sbjct: 440 CGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATL 499

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           + + + +++  QGRQ+HA + K   V+D FVG++L++MY KCG+I  A + F  M+ +N 
Sbjct: 500 IKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNI 559

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
             WN M+ G AQ+G  +EAV L+K M + G++PD ++F+ IL+ACSH+GL     E  +S
Sbjct: 560 ALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHS 619

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M  D+G+EP ++HY+C++D LGRAG   EA+ +I+ MP K    I   LL +CR+  +V 
Sbjct: 620 MPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVE 679

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             KR A  LF L+P +SA Y LL+NIY++  RWDD+   R++M    + KDP +S
Sbjct: 680 TGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFS 734



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 155/620 (25%), Positives = 285/620 (45%), Gaps = 91/620 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  HA I+ +G   D FL N L+ +YSKC +  SA+                       
Sbjct: 96  GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSAR----------------------- 132

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALV-----RNGLEEKALSVYNKMSNEGFVPTHI 121
                   ++FD  PER++V+WN ++ A        +G  ++ L ++  +       T +
Sbjct: 133 --------QVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRM 184

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           TLA V K       +      HG  IKIGL+ +++V+ AL+++Y+KCG  + A  +F+ M
Sbjct: 185 TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWM 244

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E + V +  M+ G  +     EA ++F    R  +  D  S+  +L  C          
Sbjct: 245 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGC---------- 294

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           ++A +D+       G+QVH + +K G ++D+ ++NSL++MY+K G    A  +F+++   
Sbjct: 295 LWAGTDDL----ELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHL 350

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT--SINMLVAC----------- 348
            ++SWN MI+   Q     +++ L   +   G +PD  T  SI +  A            
Sbjct: 351 DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQ 410

Query: 349 ---------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                                      ++ GD+     +F+ + +P   +W +M+S    
Sbjct: 411 GKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVD 470

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           + N  +A++++  M+   V PD  T A ++ + + +  LE G+Q+HA  +K     D +V
Sbjct: 471 NGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFV 530

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + L+ +Y+KC   E A R+F ++   +I  WN+M+ GL+ +    EA   FK M+ + +
Sbjct: 531 GTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGI 590

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQ-VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
            P + SF  +LS+C+    + +  + +H+     G   +I   S L++   + G +  A 
Sbjct: 591 EPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEAD 650

Query: 561 QFFDMMHGKNTVTWNEMIHG 580
           +  + M  K + + N  + G
Sbjct: 651 KVIETMPFKASASINRALLG 670



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 215/451 (47%), Gaps = 79/451 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           A + +H + ++ GL  D F+   L+ +YSKC     A+ LFD         W        
Sbjct: 201 AAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFD---------W-------- 243

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                         M ER+VV WN ++   V+ GLE++A  ++++    G  P   ++  
Sbjct: 244 --------------MRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQL 289

Query: 126 VFKAS--TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +          D+E G++ HG+ +K GLD ++ VAN+L+++Y+K G    A  VF +M  
Sbjct: 290 ILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKH 349

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + +++ +M+S  A++    E++ +F  ++ + +  D  +L+S+    A + CG      
Sbjct: 350 LDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACG----CL 405

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
              D        G+Q+H   IK GF++DLH+++ +LDMY K GDM +A ++F+ +     
Sbjct: 406 VLLD-------QGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDD 458

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--CV------------ 349
           V+W  MI+G        +A+ +  RM+     PDE T   ++ A  CV            
Sbjct: 459 VAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHAN 518

Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + G+I+    +F  M   +++ WNAML   +Q  N +EA
Sbjct: 519 VIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEA 578

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           + LF+ M+  G++PDR +   ILS+C+  G+
Sbjct: 579 VNLFKSMKSHGIEPDRVSFIGILSACSHAGL 609



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 224/458 (48%), Gaps = 61/458 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   +++GL  D  + N L+ +YSK    +                          
Sbjct: 305 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAY-------------------------- 338

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                FA ++F++M   +++SWN++IS+  ++ LEE++++++  + +EG  P H TLAS+
Sbjct: 339 -----FAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASI 393

Query: 127 FKASTA-----LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
             A+ A     L+ ++ G++ H   IK G D +++V + +L +Y KCG   +A  VF  +
Sbjct: 394 TLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYI 453

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S P++V +T+M+SG        +AL ++  M +  V  D  + ++++             
Sbjct: 454 SAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLI------------- 500

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
              ++ +  +    G+Q+H   IKL   +D  +  SL+DMYAK G+++ A  +F  +  R
Sbjct: 501 ---KASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR 557

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
           ++  WN M+ G  Q   + +A+ L + MKS G EPD V+ I +L AC  +G      E  
Sbjct: 558 NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYL 617

Query: 362 DSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            SMP+     P +  ++ ++ +  ++   +EA K+   M F+        L   L +C  
Sbjct: 618 HSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRAL---LGACRI 674

Query: 417 MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
            G +E+GK+V AA L      D+     L  IY+   R
Sbjct: 675 QGDVETGKRV-AARLFALEPFDSAAYVLLSNIYAAANR 711


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/713 (33%), Positives = 381/713 (53%), Gaps = 72/713 (10%)

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           W +L+ + VR+ L  +A+  Y  M   G  P +    ++ KA   L D+E G++ H  V 
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 148 KIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           K G    ++ VAN L++LY KCG       VF+ +SE N+V++ +++S L   ++   AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAR----EGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
           E FR M+ + V   S +L SV+  C+     EG                  + G+QVH  
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL-----------------MMGKQVHAY 227

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            ++ G E +  + N+L+ MY K G + S++V+  +   R +V+WN +++   Q  Q  +A
Sbjct: 228 GLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 286

Query: 323 IELLQRMKSCGFEPDEVTSINMLVAC-----VRSG------------------------- 352
           +E L+ M   G EPDE T  ++L AC     +R+G                         
Sbjct: 287 LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVD 346

Query: 353 ------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ-FRGVKPDRT 405
                  + +GR +FD M    +  WNAM++ YSQ+E+ KEA+ LF  M+   G+  + T
Sbjct: 347 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 406

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T+A ++ +C   G     + +H   +K     D +V + L+ +YS+  + ++A R+F ++
Sbjct: 407 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-----------MYPTQFSFATVLSS 514
            + D+V WN+MI G   +    +A +   +M+  E           + P   +  T+L S
Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 526

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           CA LS+  +G+++HA   K+    D+ VGSAL++MY KCG +  +R+ FD +  KN +TW
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 586

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I  Y  +G G EA+ L + M+  GVKP+++TF+++  ACSHSG+VD G+ IF  M+ 
Sbjct: 587 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 646

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK-DDPVIWEVLLSSCRLHANVRLA 693
           D+GVEP  DHY C++D LGRAG   EA  L++ MP   +    W  LL + R+H N+ + 
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIG 706

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + AA+ L +L+P  ++ Y LLANIYSS G WD    VR  M E  + K+P  S
Sbjct: 707 EIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 278/615 (45%), Gaps = 105/615 (17%)

Query: 7   GKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK +HAH+ + G   D   + N L+ LY KC                             
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG---------------------------- 147

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
              D    YK+FD + ERN VSWN+LIS+L      E AL  +  M +E   P+  TL S
Sbjct: 148 ---DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204

Query: 126 VFKASTALLDVE---HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           V  A + L   E    G++ H   ++ G + N ++ N L+++Y K G    +  +     
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFG 263

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + VT+  ++S L + ++++EALE  R M+ + V  D  ++SSVL  C           
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC----------- 312

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
              S  +  R   G+++H   +K G  + +  + ++L+DMY     + S   +F  + +R
Sbjct: 313 ---SHLEMLRT--GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRS--------- 351
            +  WN MIAGY Q     +A+ L   M +S G   +  T   ++ ACVRS         
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427

Query: 352 --------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                     G I     +F  M    + +WN M++ Y  SE+H
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487

Query: 386 KEAIKLFREMQ------FRG-----VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           ++A+ L  +MQ       +G     +KP+  TL  IL SCAA+  L  GK++HA ++K  
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 547

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V S L+ +Y+KC   +++ +VF +IP+ +++ WN +I    ++    EA    +
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 607

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV---NDIFVGSALIEMYC 551
            M    + P + +F +V ++C+      +G ++   ++ D  V   +D +  + ++++  
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY--ACVVDLLG 665

Query: 552 KCGDIYGARQFFDMM 566
           + G I  A Q  +MM
Sbjct: 666 RAGRIKEAYQLMNMM 680



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 65/408 (15%)

Query: 6   AGKLLHAHILRNGLFDD-TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
            GK LHA+ L+NG  D+ +F+ + L+++Y  C    S + +FD M               
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM--------------- 364

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITL 123
                       FD    R +  WN +I+   +N  +++AL ++  M  + G +    T+
Sbjct: 365 ------------FD----RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A V  A             HG V+K GLD++ +V N L+ +Y++ G    A+ +F +M +
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 468

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLM-----------IRKAVSIDSVSLSSVLGVCA 232
            + VT+  M++G   ++   +AL +   M            R ++  +S++L ++L  CA
Sbjct: 469 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                             S    G+++H   IK     D+ + ++L+DMYAK G +  + 
Sbjct: 529 ----------------ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  +P+++V++WNV+I  YG      +AI+LL+ M   G +P+EVT I++  AC  SG
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632

Query: 353 DIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
            +  G  +F  M       PS   +  ++    ++   KEA +L   M
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 140/268 (52%), Gaps = 7/268 (2%)

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           S S   W  +L S  +S   +EA+  + +M   G+KPD      +L + A +  +E GKQ
Sbjct: 59  SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118

Query: 426 VHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL-SLN 483
           +HA   K    +D+  VA+ L+ +Y KC       +VF RI E + V WNS+I+ L S  
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS---FQGRQVHAQIEKDGYVNDI 540
             ++ A   F+ M    + P+ F+  +V+++C+ L        G+QVHA   + G +N  
Sbjct: 179 KWEM-ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS- 236

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           F+ + L+ MY K G +  ++       G++ VTWN ++    QN    EA+   ++M+  
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEI 628
           GV+PD+ T  ++L ACSH  ++  G E+
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKEL 324



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/490 (22%), Positives = 195/490 (39%), Gaps = 75/490 (15%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H  +++ GL  D F+ N L+++YS+      A  +F KM  +D+ +WN +++    S+ 
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
            E A  L  +M                   LE K   V    S     P  ITL ++  +
Sbjct: 487 HEDALLLLHKM-----------------QNLERK---VSKGASRVSLKPNSITLMTILPS 526

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
             AL  +  G+  H   IK  L  ++ V +AL+ +YAKCG  + +  VF+++ + N +T+
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 586

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDN 248
             ++          EA+++ R+M+ + V  + V+  SV   C+  G   E   +F     
Sbjct: 587 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 646

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN-----------------GDMDSA 291
            +          C+   LG    +  +  L++M  ++                  +++  
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIG 706

Query: 292 EVIFSNLP--ERSVVSWNVMIAG-YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
           E+   NL   E +V S  V++A  Y       KA E+ + MK  G   +   S       
Sbjct: 707 EIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSW------ 760

Query: 349 VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
                I+ G E+   +   S    +  LS Y ++        L+  M+  G  PD     
Sbjct: 761 -----IEHGDEVHKFVAGDSSHPQSEKLSGYLET--------LWERMRKEGYVPD----- 802

Query: 409 IILSSCAAMGILESGKQV----HAASLKTASHIDNYVASGLIGIYSK---CQRNELAERV 461
              +SC    + E  K++    H+  L  A  I N     +I +      C    LA + 
Sbjct: 803 ---TSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKF 859

Query: 462 FHRIPELDIV 471
             +I + +I+
Sbjct: 860 ISKIVDREII 869


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/713 (33%), Positives = 381/713 (53%), Gaps = 72/713 (10%)

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           W +L+ + VR+ L  +A+  Y  M   G  P +    ++ KA   L D+E G++ H  V 
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 148 KIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           K G    ++ VAN L++LY KCG       VF+ +SE N+V++ +++S L   ++   AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAR----EGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
           E FR M+ + V   S +L SV+  C+     EG                  + G+QVH  
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL-----------------MMGKQVHAY 227

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            ++ G E +  + N+L+ MY K G + S++V+  +   R +V+WN +++   Q  Q  +A
Sbjct: 228 GLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 286

Query: 323 IELLQRMKSCGFEPDEVTSINMLVAC-----VRSG------------------------- 352
           +E L+ M   G EPDE T  ++L AC     +R+G                         
Sbjct: 287 LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVD 346

Query: 353 ------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ-FRGVKPDRT 405
                  + +GR +FD M    +  WNAM++ YSQ+E+ KEA+ LF  M+   G+  + T
Sbjct: 347 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 406

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T+A ++ +C   G     + +H   +K     D +V + L+ +YS+  + ++A R+F ++
Sbjct: 407 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-----------MYPTQFSFATVLSS 514
            + D+V WN+MI G   +    +A +   +M+  E           + P   +  T+L S
Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 526

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           CA LS+  +G+++HA   K+    D+ VGSAL++MY KCG +  +R+ FD +  KN +TW
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 586

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I  Y  +G G EA+ L + M+  GVKP+++TF+++  ACSHSG+VD G+ IF  M+ 
Sbjct: 587 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 646

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK-DDPVIWEVLLSSCRLHANVRLA 693
           D+GVEP  DHY C++D LGRAG   EA  L++ MP   +    W  LL + R+H N+ + 
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIG 706

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + AA+ L +L+P  ++ Y LLANIYSS G WD    VR  M E  + K+P  S
Sbjct: 707 EIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 278/615 (45%), Gaps = 105/615 (17%)

Query: 7   GKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK +HAH+ + G   D   + N L+ LY KC                             
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG---------------------------- 147

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
              D    YK+FD + ERN VSWN+LIS+L      E AL  +  M +E   P+  TL S
Sbjct: 148 ---DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204

Query: 126 VFKASTALLDVE---HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           V  A + L   E    G++ H   ++ G + N ++ N L+++Y K G    +  +     
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFG 263

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + VT+  ++S L + ++++EALE  R M+ + V  D  ++SSVL  C           
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC----------- 312

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
              S  +  R   G+++H   +K G  + +  + ++L+DMY     + S   +F  + +R
Sbjct: 313 ---SHLEMLRT--GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRS--------- 351
            +  WN MIAGY Q     +A+ L   M +S G   +  T   ++ ACVRS         
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427

Query: 352 --------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                     G I     +F  M    + +WN M++ Y  SE+H
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487

Query: 386 KEAIKLFREMQ------FRG-----VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           ++A+ L  +MQ       +G     +KP+  TL  IL SCAA+  L  GK++HA ++K  
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 547

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V S L+ +Y+KC   +++ +VF +IP+ +++ WN +I    ++    EA    +
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 607

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV---NDIFVGSALIEMYC 551
            M    + P + +F +V ++C+      +G ++   ++ D  V   +D +  + ++++  
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY--ACVVDLLG 665

Query: 552 KCGDIYGARQFFDMM 566
           + G I  A Q  +MM
Sbjct: 666 RAGRIKEAYQLMNMM 680



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 65/408 (15%)

Query: 6   AGKLLHAHILRNGLFDD-TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
            GK LHA+ L+NG  D+ +F+ + L+++Y  C    S + +FD M               
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM--------------- 364

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITL 123
                       FD    R +  WN +I+   +N  +++AL ++  M  + G +    T+
Sbjct: 365 ------------FD----RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A V  A             HG V+K GLD++ +V N L+ +Y++ G    A+ +F +M +
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 468

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLM-----------IRKAVSIDSVSLSSVLGVCA 232
            + VT+  M++G   ++   +AL +   M            R ++  +S++L ++L  CA
Sbjct: 469 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                             S    G+++H   IK     D+ + ++L+DMYAK G +  + 
Sbjct: 529 ----------------ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  +P+++V++WNV+I  YG      +AI+LL+ M   G +P+EVT I++  AC  SG
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632

Query: 353 DIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
            +  G  +F  M       PS   +  ++    ++   KEA +L   M
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 140/268 (52%), Gaps = 7/268 (2%)

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           S S   W  +L S  +S   +EA+  + +M   G+KPD      +L + A +  +E GKQ
Sbjct: 59  SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118

Query: 426 VHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL-SLN 483
           +HA   K    +D+  VA+ L+ +Y KC       +VF RI E + V WNS+I+ L S  
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS---FQGRQVHAQIEKDGYVNDI 540
             ++ A   F+ M    + P+ F+  +V+++C+ L        G+QVHA   + G +N  
Sbjct: 179 KWEM-ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS- 236

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           F+ + L+ MY K G +  ++       G++ VTWN ++    QN    EA+   ++M+  
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEI 628
           GV+PD+ T  ++L ACSH  ++  G E+
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKEL 324



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/490 (22%), Positives = 195/490 (39%), Gaps = 75/490 (15%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H  +++ GL  D F+ N L+++YS+      A  +F KM  +D+ +WN +++    S+ 
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
            E A  L  +M                   LE K   V    S     P  ITL ++  +
Sbjct: 487 HEDALLLLHKM-----------------QNLERK---VSKGASRVSLKPNSITLMTILPS 526

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
             AL  +  G+  H   IK  L  ++ V +AL+ +YAKCG  + +  VF+++ + N +T+
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 586

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDN 248
             ++          EA+++ R+M+ + V  + V+  SV   C+  G   E   +F     
Sbjct: 587 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 646

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN-----------------GDMDSA 291
            +          C+   LG    +  +  L++M  ++                  +++  
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIG 706

Query: 292 EVIFSNLP--ERSVVSWNVMIAG-YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
           E+   NL   E +V S  V++A  Y       KA E+ + MK  G   +   S       
Sbjct: 707 EIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSW------ 760

Query: 349 VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
                I+ G E+   +   S    +  LS Y ++        L+  M+  G  PD     
Sbjct: 761 -----IEHGDEVHKFVAGDSSHPQSEKLSGYLET--------LWERMRKEGYVPD----- 802

Query: 409 IILSSCAAMGILESGKQV----HAASLKTASHIDNYVASGLIGIYSK---CQRNELAERV 461
              +SC    + E  K++    H+  L  A  I N     +I +      C    LA + 
Sbjct: 803 ---TSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKF 859

Query: 462 FHRIPELDIV 471
             +I + +I+
Sbjct: 860 ISKIVDREII 869


>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/775 (30%), Positives = 386/775 (49%), Gaps = 83/775 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA +LR+G   D FL + L+ +Y KC     A+ +FD MPH+D+ +W A++SA   
Sbjct: 79  GKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITA 138

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           + D   A +LF EM E                               EG VP    LA+ 
Sbjct: 139 AGDAGAALRLFAEMSE-------------------------------EGVVPNGFALAAA 167

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA T   D+    + H   +K+    + YV+++L+  Y  CG    A     +    ++
Sbjct: 168 LKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSD 227

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+++  A+     + + +F  ++     I   +L +VL  C   G        A+S
Sbjct: 228 VSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELG-------LAKS 280

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    GQ VH L IK G E D  L+N L++MY+K    + A  +F+ + E  VV  
Sbjct: 281 ---------GQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHC 331

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           ++MI+ + +   + +A ++  +M   G +P++ T + + +   R+GD+   R +      
Sbjct: 332 SLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVK 391

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        FD M  P ++SWN +LS +    N +  +++
Sbjct: 392 SGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRI 451

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+E+   GV  ++ T   IL  C ++  L  G QVHA  LK+    D  V+  L+ +Y +
Sbjct: 452 FKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQ 511

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
                 A  VF R+ E D+  W  +++  +      +A   F+ M +    P   + AT 
Sbjct: 512 AGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATS 571

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS C+ L+    G Q+H+   K G+ N   V SAL++MY KCG++  A   FD     + 
Sbjct: 572 LSVCSDLACLGSGLQLHSYTIKSGW-NSSVVSSALVDMYVKCGNLADAEMLFDESDTHDL 630

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           V WN +I GYAQ+G+G +A+  +++MI  G  PD+ITFV +L+ACSH+GL+D G   F  
Sbjct: 631 VEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKL 690

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           +   +G+ P L+HY CM+D L +AG   EAE LI+EMP   D  +W+ +L +CR+H N+ 
Sbjct: 691 LSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIE 750

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +A+RAAE+LF   P + +   LL+NIY+ L RW+D+  +R ++ +  + K+P  S
Sbjct: 751 IAERAAEKLFESQPDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCS 805



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/615 (23%), Positives = 267/615 (43%), Gaps = 54/615 (8%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           + A+  +   A   +  G+  H  +++ G   + ++ ++LL++Y KCG    A  VF+ M
Sbjct: 62  SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + V +TAM+S +        AL +F  M  + V  +  +L++ L  C          
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACT--------- 172

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
               SD  F+  VH Q V     KL    D ++S+SL++ Y   G++D AE    + P R
Sbjct: 173 --VGSDLGFTPQVHAQAV-----KLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVR 225

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--- 358
           S VSWN ++  Y +     K + +  ++   G E  + T   +L  C+  G  K+G+   
Sbjct: 226 SDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVH 285

Query: 359 --------------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                           E+F  +  P V   + M+S + + +   
Sbjct: 286 GLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAP 345

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA  +F +M   GVKP++ T   +    +  G +   + +HA  +K+       V   ++
Sbjct: 346 EAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIV 405

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
           G+Y K    + A   F  +   DI  WN++++G    +        FK++    +   ++
Sbjct: 406 GMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKY 465

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++  +L  C  L     G QVHA + K G+  D  V   L++MY + G    AR  FD +
Sbjct: 466 TYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRL 525

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++  +W  ++  YA+   G++A+  ++ M+    +P+D T    L+ CS    +  G+
Sbjct: 526 KERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGL 585

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           ++ +S  +  G    +   + ++D   + G+  +AEML DE     D V W  ++     
Sbjct: 586 QL-HSYTIKSGWNSSVVS-SALVDMYVKCGNLADAEMLFDESD-THDLVEWNTIICGYAQ 642

Query: 687 HANVRLAKRAAEELF 701
           H +   A  A +E+ 
Sbjct: 643 HGHGYKALEAFQEMI 657



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 224/516 (43%), Gaps = 87/516 (16%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ +H  +++ GL  D  L N LIE+YSKC                        LSA  
Sbjct: 280 SGQAVHGLVIKRGLETDRVLNNCLIEMYSKC------------------------LSA-- 313

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                E AY++F  + E +VV  + +IS   R+ +  +A  ++ +MS+ G  P   T   
Sbjct: 314 -----EDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVG 368

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +   ++   DV   R  H  ++K G  +   V +A++ +Y K G  + A+  F+ M  P+
Sbjct: 369 LAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPD 428

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             ++  ++SG    +     L +F+ +I + V  +  +   +L  C            + 
Sbjct: 429 IASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCT-----------SL 477

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D +F     G QVH   +K GF+ D  +S  LLDMY + G   +A ++F  L ER V S
Sbjct: 478 MDLRF-----GCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFS 532

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           W V+++ Y +  +  KAIE  + M      P++ T    L  C                 
Sbjct: 533 WTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTI 592

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                            V+ G++     +FD   +  +  WN ++  Y+Q  +  +A++ 
Sbjct: 593 KSGWNSSVVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEA 652

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAASLKTASHIDNYVASGLIGI 448
           F+EM   G  PD  T   +LS+C+  G+L+ G+   ++ ++       +++Y    ++ I
Sbjct: 653 FQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYAC--MVDI 710

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
            +K  +   AE + + +P   D   W +++    ++
Sbjct: 711 LAKAGKLAEAESLINEMPLTPDASLWKTILGACRMH 746



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 128/274 (46%), Gaps = 9/274 (3%)

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           S+ S S    E ++L R  + R       + A  L  CAA   L  GK +HA  L++   
Sbjct: 41  SAPSPSPRDDERLRL-RAEELR-------SYAAALQGCAASRALRRGKALHARLLRSGPR 92

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D ++   L+ +Y KC R   A  VF  +P  D+V W +M++ ++       A   F +M
Sbjct: 93  PDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEM 152

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
            +  + P  F+ A  L +C   S      QVHAQ  K   + D +V S+L+E Y  CG++
Sbjct: 153 SEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEV 212

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             A +       ++ V+WN +++ YA++G   + + ++  ++ SG +    T   +L  C
Sbjct: 213 DVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCC 272

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
              GL   G +  + + +  G+E       C+I+
Sbjct: 273 MELGLAKSG-QAVHGLVIKRGLETDRVLNNCLIE 305


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/699 (33%), Positives = 367/699 (52%), Gaps = 66/699 (9%)

Query: 67  SDDLEFAYKLFDEMPER--NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
           S+   +A  L + +P    +V  WN LI   +  G      ++Y +M + G+ P H T  
Sbjct: 204 SNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFP 263

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE- 183
            VFKA   L  +  G   H  V + G   N++V NA++S+Y KCG  +HA  +F+++   
Sbjct: 264 FVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHR 323

Query: 184 --PNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
              + V++ +++S          AL +F ++  R  +S D +SL ++L  CA        
Sbjct: 324 GIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACA-------- 375

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                     + ++ G+QVH  +I+ G   D+ + N+++DMYAK G M+ A  +F  +  
Sbjct: 376 --------SLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKF 427

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           + VVSWN M+ GY Q  +   A+ L +RM     E D VT                    
Sbjct: 428 KDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVT-------------------- 467

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                      W A+++ Y+Q     EA+ +FR+M   G +P+  TL  +LS+C ++G L
Sbjct: 468 -----------WTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGAL 516

Query: 421 ESGKQVHAASLKTASHIDN--------YVASGLIGIYSKCQRNELAERVFHRI--PELDI 470
             GK+ H  ++K   ++D          V +GLI +Y+KCQ  E+A ++F  +   + D+
Sbjct: 517 LHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDV 576

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQ--NEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           V W  MI G + +     A   F  M +    + P  F+ +  L +CA+L++   GRQVH
Sbjct: 577 VTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVH 636

Query: 529 AQIEKDGYVND-IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           A + ++ Y +  +FV + LI+MY K GD+  A+  FD M  +N V+W  ++ GY  +G G
Sbjct: 637 AYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRG 696

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
           ++A+R++ +M    + PD ITF+ +L ACSHSG+VD G+  FN M  D GV+P  +HY C
Sbjct: 697 EDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYAC 756

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
           M+D  GRAG   EA  LI+EMP +  PV+W  LLS+CRLH+NV L + AA  L  L+  N
Sbjct: 757 MVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGN 816

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
              Y+LL+NIY++  RW D+  +R  M    I K P  S
Sbjct: 817 DGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCS 855



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 226/444 (50%), Gaps = 41/444 (9%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + G+ +H   +R+GL DD F+ N ++++Y+KC     A  +F +M  KD+ SWNA+++
Sbjct: 379 ASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVT 438

Query: 63  AQCKSDDLEFAYKLFDEMPERN----VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
              ++  LE A  LF+ M E N    VV+W  +I+   + G   +AL V+ +M + G  P
Sbjct: 439 GYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRP 498

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLD--------KNIYVANALLSLYAKCGW 170
             +TL S+  A  ++  + HG+  H   IK  L+         ++ V N L+ +YAKC  
Sbjct: 499 NVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQS 558

Query: 171 TKHAVPVFEEMSEPNE--VTFTAMMSGLAKTDRVVEALEMFRLMIR--KAVSIDSVSLSS 226
           T+ A  +F+ +S  +   VT+T M+ G A+      AL++F  M +  K++  +  +LS 
Sbjct: 559 TEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSC 618

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKN 285
            L  CAR                 +    G+QVH   ++  +    L ++N L+DMY+K+
Sbjct: 619 ALVACAR----------------LAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKS 662

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
           GD+D+A+++F N+P+R+ VSW  ++ GYG   +   A+ +   M+     PD +T + +L
Sbjct: 663 GDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVL 722

Query: 346 VACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
            AC  SG +  G   F+ M       P    +  M+  + ++    EA+KL  EM    +
Sbjct: 723 YACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMP---M 779

Query: 401 KPDRTTLAIILSSCAAMGILESGK 424
           +P       +LS+C     +E G+
Sbjct: 780 EPTPVVWVALLSACRLHSNVELGE 803



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 225/484 (46%), Gaps = 102/484 (21%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           HA + R+G   + F+CN ++ +Y KC                                 L
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGA-------------------------------L 310

Query: 71  EFAYKLFDEMPERNV---VSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLASV 126
             A+ +FD++  R +   VSWN+++SA +       AL++++KM+    + P  I+L ++
Sbjct: 311 RHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNI 370

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  +L     GR+ HG  I+ GL  +++V NA++ +YAKCG  + A  VF+ M   + 
Sbjct: 371 LPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDV 430

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
           V++ AM++G ++  R+  AL +F  M  + + +D V+ ++V+   A+ G G E+ DVF Q
Sbjct: 431 VSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQ 490

Query: 246 SDNKFSRN------------------VHGQQVHCLTIKLGFEA--------DLHLSNSLL 279
             +  SR                   +HG++ HC  IK             DL + N L+
Sbjct: 491 MCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLI 550

Query: 280 DMYAKNGDMDSAEVIFSNL--PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC--GFE 335
           DMYAK    + A  +F ++   +R VV+W VMI GY Q   +  A++L   M       +
Sbjct: 551 DMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIK 610

Query: 336 PDEVTSINMLVACVR------------------------------------SGDIKTGRE 359
           P++ T    LVAC R                                    SGD+ T + 
Sbjct: 611 PNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQI 670

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +FD+MP  +  SW ++++ Y      ++A+++F EM+   + PD  T  ++L +C+  G+
Sbjct: 671 VFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGM 730

Query: 420 LESG 423
           ++ G
Sbjct: 731 VDHG 734


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/783 (29%), Positives = 395/783 (50%), Gaps = 85/783 (10%)

Query: 1   KKAHVAGKLLHAH-ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           KKA   G+ +HAH I  N LF+  FL  RL+ +Y KC                       
Sbjct: 127 KKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCG---------------------- 164

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
                C  D    A KLFD MP + + +WN +I A V NG    +L +Y +M   G    
Sbjct: 165 -----CLVD----AEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLD 215

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             T   + KA   L D   G   HGL IK G    ++VAN+++ +Y KC     A  +F+
Sbjct: 216 ACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFD 275

Query: 180 EMSEPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            M E  +V ++ +M+S  +   + +EAL +F  M + +++ ++ +  + L  C       
Sbjct: 276 RMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQAC------- 328

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                   D+ F +   G  +H   +K  +  ++ ++N+L+ MYA+ G M  A  IF N+
Sbjct: 329 -------EDSSFIK--QGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNM 379

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
            +   +SWN M++G+ Q     +A++    M+  G +PD V  I+++ A  RSG+   G 
Sbjct: 380 DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGM 439

Query: 359 EM-----------------------------------FDSMPSPSVSSWNAMLSSYSQSE 383
           ++                                   FD MP   V SW  +++ ++Q+ 
Sbjct: 440 QIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNG 499

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
           +H  A++LFRE+Q  G+  D   ++ IL +C+ + ++ S K++H+  ++     D  + +
Sbjct: 500 SHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQN 558

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           G++ +Y +C   + A R+F  I   D+V W SMI+    N L  EA   F  M++  + P
Sbjct: 559 GIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEP 618

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              S  ++LS+ A LS+  +G+++H  + + G+V +  + S L++MY +CG +  +R  F
Sbjct: 619 DSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVF 678

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           + +  K+ V W  MI+ Y  +G G  A+ L++ M    + PD I FVA+L ACSHSGL++
Sbjct: 679 NFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMN 738

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G     SM+ ++ +EP  +HY C++D LGRA H  EA   +  M  +    +W  LL +
Sbjct: 739 EGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGA 798

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           C++H+N  L + AA++L  +DP+N   Y L++N+Y++  RW D+  VR  M  + + K+P
Sbjct: 799 CQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNP 858

Query: 744 AYS 746
             S
Sbjct: 859 GCS 861



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 122/221 (55%), Gaps = 2/221 (0%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDN-YVASGLIGIYSKCQRNELAERVFHRIPEL 468
           +L  C +   L  G+QVHA  + + +  ++ ++++ L+ +Y KC     AE++F  +P  
Sbjct: 120 VLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHK 179

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
            I  WN+MI     N   + +   +++MR + +     +F  +L +C  L     G +VH
Sbjct: 180 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVH 239

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYG 587
               K+GYV+ +FV ++++ MY KC D+ GARQ FD M  K + V+WN MI  Y+ NG  
Sbjct: 240 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 299

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            EA+RL+ +M  + + P+  TFVA L AC  S  +  G+ I
Sbjct: 300 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFI 340



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 7/201 (3%)

Query: 488 EAFMFFKQMRQNEMYPTQFS----FATVLSSCAKLSSSFQGRQVHAQ-IEKDGYVNDIFV 542
           EAF     +  N+  P+QFS    +++VL  C    +  +G+QVHA  I  +   N +F+
Sbjct: 94  EAFQSLTDLFANQS-PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFL 152

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            + L+ MY KCG +  A + FD M  K   TWN MI  Y  NG    ++ LY++M  SG+
Sbjct: 153 STRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGI 212

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
             D  TF  IL AC        G E+ + + +  G   I+     ++    +    + A 
Sbjct: 213 PLDACTFPCILKACGLLKDRRCGAEV-HGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR 271

Query: 663 MLIDEMPCKDDPVIWEVLLSS 683
            L D MP K+D V W  ++S+
Sbjct: 272 QLFDRMPEKEDVVSWNSMISA 292


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 239/772 (30%), Positives = 387/772 (50%), Gaps = 124/772 (16%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA  + +G    TF+CN LI+LY K                      N  LS+      
Sbjct: 186 IHAKTITSGFESSTFICNPLIDLYFK----------------------NGFLSS------ 217

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
              A K+F+ +  R+ VSW  +IS L +NG EE+A+ ++ ++              V  A
Sbjct: 218 ---AKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSA 260

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            T +   E G++ HGLV+K G     YV NAL++LY++ G    A  +F  MS+ + V++
Sbjct: 261 CTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSY 320

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            +++SGLA+   +  AL +F+ M       D V+++S+L  CA  G              
Sbjct: 321 NSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGA------------- 367

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                +G+Q H   IK G  +D+ +  SLLD+Y K  D+ +A   F              
Sbjct: 368 ---LPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF-------------- 410

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD-----------IKTGR 358
              YGQ     K+ ++  +M+  G  P++ T  ++L  C   G            +KTG 
Sbjct: 411 -LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGF 469

Query: 359 E------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           +                        +F  +    V SW AM++ Y+Q +   EA+ LF+E
Sbjct: 470 QFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKE 529

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           MQ +G+K D    A  +S+CA +  L+ G+Q+HA S  +    D  + + L+ +Y++C +
Sbjct: 530 MQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGK 589

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              A   F +I   D V WNS+++G + +    EA   F QM +  +    F+F + +S+
Sbjct: 590 VREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSA 649

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
            A +++   G+Q+H  I K GY ++  V +ALI +Y KCG I             + ++W
Sbjct: 650 AANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI-------------DDISW 696

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI GY+Q+G G EA++L++DM    V P+ +TFV +L+ACSH GLVD G+  F SM  
Sbjct: 697 NSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSE 756

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
            H + P  +HY C++D LGR+G    A+  ++EMP + D ++W  LLS+C +H N+ + +
Sbjct: 757 AHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGE 816

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA  L  L+PK+SA Y L++N+Y+  G+WD     R++M +  + K+P  S
Sbjct: 817 FAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRS 868



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 166/581 (28%), Positives = 297/581 (51%), Gaps = 51/581 (8%)

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
           DL  A  +FDEMP R++  WN + +  +   L  +   ++ +M  +         A V +
Sbjct: 112 DLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLR 171

Query: 129 A-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
             S   +      + H   I  G + + ++ N L+ LY K G+   A  VFE +   + V
Sbjct: 172 GCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSV 231

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++ AM+SGL++     EA+ +F                 VL  C +    VE   F    
Sbjct: 232 SWVAMISGLSQNGYEEEAMLLF--------------CQIVLSACTK----VEFFEF---- 269

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G+Q+H L +K GF ++ ++ N+L+ +Y+++G++ SAE IF  + +R  VS+N
Sbjct: 270 --------GKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYN 321

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD----- 362
            +I+G  Q+    +A+ L ++M     +PD VT  ++L AC   G +  G++        
Sbjct: 322 SLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKA 381

Query: 363 SMPS---------------PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
            M S                 + + +     Y Q +N  ++ ++F +MQ  G+ P++ T 
Sbjct: 382 GMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTY 441

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
             IL +C  +G  + G+Q+H   LKT    + YV+S LI +Y+K  + + A ++F R+ E
Sbjct: 442 PSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKE 501

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            D+V W +MIAG + +    EA   FK+M+   +      FA+ +S+CA + +  QGRQ+
Sbjct: 502 NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQI 561

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           HAQ    GY +D+ +G+AL+ +Y +CG +  A   FD ++ K+ V+WN ++ G+AQ+GY 
Sbjct: 562 HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYF 621

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           +EA+ ++  M  +G++ +  TF + ++A ++   V +G +I
Sbjct: 622 EEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQI 662



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 257/551 (46%), Gaps = 53/551 (9%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           ++ Y    L+  Y   G    AV VF+EM   +   +  + +       +     +FR M
Sbjct: 95  RSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRM 154

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
           + K V  D    + VL      GC   +  F        R V  +Q+H  TI  GFE+  
Sbjct: 155 LTKNVEFDERIFAVVL-----RGCSGNAVSF--------RFV--EQIHAKTITSGFESST 199

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR--MK 330
            + N L+D+Y KNG + SA+ +F NL  R  VSW  MI+G  Q     +A+ L  +  + 
Sbjct: 200 FICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLS 259

Query: 331 SC-------------------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSS 371
           +C                   GF  +      ++    RSG++ +  ++F  M      S
Sbjct: 260 ACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVS 319

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           +N+++S  +Q      A+ LF++M     KPD  T+A +LS+CA++G L +GKQ H+ ++
Sbjct: 320 YNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAI 379

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           K     D  V   L+ +Y KC   + A   F    +LD           +LN    ++F 
Sbjct: 380 KAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLD-----------NLN----KSFQ 424

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            F QM+   + P QF++ ++L +C  L ++  G Q+H Q+ K G+  +++V S LI+MY 
Sbjct: 425 IFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA 484

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           K G +  A + F  +   + V+W  MI GY Q+    EA+ L+K+M   G+K D+I F +
Sbjct: 485 KHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFAS 544

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
            ++AC+    +D G +I     L  G    L     ++    R G   EA    D++  K
Sbjct: 545 AISACAGIQALDQGRQIHAQSCLS-GYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAK 603

Query: 672 DDPVIWEVLLS 682
           D+ V W  L+S
Sbjct: 604 DN-VSWNSLVS 613



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/613 (24%), Positives = 278/613 (45%), Gaps = 109/613 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH  +L+ G   +T++CN L+ LYS+  N  SA+ +F  M  +D  S+N+++S   +
Sbjct: 270 GKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQ 329

Query: 67  SDDLEFAYKLFDEM----PERNVVSWNNLISALVRNG----------------------L 100
              +  A  LF +M     + + V+  +L+SA    G                      +
Sbjct: 330 QGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVV 389

Query: 101 EEKALSVYNKMSN-----------------------------EGFVPTHITLASVFKAST 131
           E   L +Y K S+                             EG VP   T  S+ K  T
Sbjct: 390 EGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCT 449

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
            L   + G + H  V+K G   N+YV++ L+ +YAK G   HA+ +F  + E + V++TA
Sbjct: 450 TLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTA 509

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDNKF 250
           M++G  + D+  EAL +F+ M  + +  D++  +S +  CA    G+++ D         
Sbjct: 510 MIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACA----GIQALD--------- 556

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
                G+Q+H  +   G+  DL + N+L+ +YA+ G +  A   F  +  +  VSWN ++
Sbjct: 557 ----QGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLV 612

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------FD 362
           +G+ Q     +A+ +  +M   G E +  T  + + A     +++ G+++        +D
Sbjct: 613 SGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYD 672

Query: 363 SMPSPSVS--------------SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
           S    S +              SWN+M++ YSQ     EA+KLF +M+   V P+  T  
Sbjct: 673 SETEVSNALITLYAKCGTIDDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFV 732

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVA-----SGLIGIYSKCQRNELAERVFH 463
            +LS+C+ +G+++ G     +  ++ S   N V      + ++ +  +      A+R   
Sbjct: 733 GVLSACSHVGLVDEG----ISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVE 788

Query: 464 RIP-ELDIVCWNSMIAGLSLN-SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
            +P + D + W ++++  +++ ++DI  F     +   E+ P   +   ++S+   +S  
Sbjct: 789 EMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLL---ELEPKDSATYVLVSNMYAVSGK 845

Query: 522 FQGRQVHAQIEKD 534
           +  R    Q+ KD
Sbjct: 846 WDCRDRTRQMMKD 858


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 239/730 (32%), Positives = 370/730 (50%), Gaps = 65/730 (8%)

Query: 35  KCNNTHSAQHLFDKMPHKDIYSWNA---ILSAQCKSDDLEFAYKLFDEMP--ERNVVSWN 89
           KC      + +  K+    I + N    ++S       L  A  L    P  +  V  WN
Sbjct: 37  KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96

Query: 90  NLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI 149
           +LI +   NG   K L ++  M +  + P + T   VFKA   +  V  G   H L +  
Sbjct: 97  SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156

Query: 150 GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
           G   N++V NAL+++Y++C     A  VF+EMS  + V++ +++   AK  +   ALEMF
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216

Query: 210 RLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
             M  +     D+++L +VL  CA  G                 +  G+Q+HC  +    
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLG----------------THSLGKQLHCFAVTSEM 260

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
             ++ + N L+DMYAK G MD A  +FSN+  + VVSWN M+AGY Q  +   A+ L ++
Sbjct: 261 IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEK 320

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
           M+    + D VT                               W+A +S Y+Q     EA
Sbjct: 321 MQEEKIKMDVVT-------------------------------WSAAISGYAQRGLGYEA 349

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI-------DNYV 441
           + + R+M   G+KP+  TL  +LS CA++G L  GK++H  ++K    +       +N V
Sbjct: 350 LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409

Query: 442 ASGLIGIYSKCQRNELAERVFHRI--PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            + LI +Y+KC++ + A  +F  +   E D+V W  MI G S +    +A     +M + 
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469

Query: 500 --EMYPTQFSFATVLSSCAKLSSSFQGRQVHA-QIEKDGYVNDIFVGSALIEMYCKCGDI 556
             +  P  F+ +  L +CA L++   G+Q+HA  +        +FV + LI+MY KCG I
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSI 529

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             AR  FD M  KN VTW  ++ GY  +GYG+EA+ ++ +M   G K D +T + +L AC
Sbjct: 530 SDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYAC 589

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SHSG++D G+E FN M+   GV P  +HY C++D LGRAG  + A  LI+EMP +  PV+
Sbjct: 590 SHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVV 649

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W   LS CR+H  V L + AAE++  L   +   Y+LL+N+Y++ GRW D+  +R LM  
Sbjct: 650 WVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRH 709

Query: 737 NCIVKDPAYS 746
             + K P  S
Sbjct: 710 KGVKKRPGCS 719



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 243/548 (44%), Gaps = 114/548 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  HA  L  G   + F+ N L+ +YS+C +   A+ +FD+M   D+ SWN+I      
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSI------ 199

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLAS 125
                                    I +  + G  + AL ++++M+NE G  P +ITL +
Sbjct: 200 -------------------------IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVN 234

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V     +L     G++ H   +   + +N++V N L+ +YAKCG    A  VF  MS  +
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM++G ++  R  +A+ +F  M  + + +D V+ S+ +   A+ G G E+     
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA--LGV 352

Query: 246 SDNKFSRNV---------------------HGQQVHCLTIKLGFEADLH---------LS 275
                S  +                     HG+++HC  IK  +  DL          + 
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--YPIDLRKNGHGDENMVI 410

Query: 276 NSLLDMYAKNGDMDSAEVIFSNL--PERSVVSWNVMIAGYGQKYQSTKAIELLQRM--KS 331
           N L+DMYAK   +D+A  +F +L   ER VV+W VMI GY Q   + KA+ELL  M  + 
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470

Query: 332 CGFEPDEVTSINMLVAC------------------------------------VRSGDIK 355
           C   P+  T    LVAC                                     + G I 
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
             R +FD+M + +  +W ++++ Y      +EA+ +F EM+  G K D  TL ++L +C+
Sbjct: 531 DARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590

Query: 416 AMGILESGKQVHAASLKTASHI----DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDI 470
             G+++ G + +   +KT   +    ++Y    L+ +  +  R   A R+   +P E   
Sbjct: 591 HSGMIDQGME-YFNRMKTVFGVSPGPEHYAC--LVDLLGRAGRLNAALRLIEEMPMEPPP 647

Query: 471 VCWNSMIA 478
           V W + ++
Sbjct: 648 VVWVAFLS 655



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 216/458 (47%), Gaps = 40/458 (8%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
            H  GK LH   + + +  + F+ N L+++Y+KC     A  +F  M  KD+ SWNA+++
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303

Query: 63  AQCKSDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
              +    E A +LF++M E     +VV+W+  IS   + GL  +AL V  +M + G  P
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIK--IGLDKNIY-----VANALLSLYAKCGWT 171
             +TL SV     ++  + HG+  H   IK  I L KN +     V N L+ +YAKC   
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423

Query: 172 KHAVPVFEEMS--EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI--DSVSLSSV 227
             A  +F+ +S  E + VT+T M+ G ++     +ALE+   M  +      ++ ++S  
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA-DLHLSNSLLDMYAKNG 286
           L  CA                  +    G+Q+H   ++    A  L +SN L+DMYAK G
Sbjct: 484 LVACA----------------SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCG 527

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
            +  A ++F N+  ++ V+W  ++ GYG      +A+ +   M+  GF+ D VT + +L 
Sbjct: 528 SISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLY 587

Query: 347 ACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           AC  SG I  G E F+ M      SP    +  ++    ++     A++L  EM    ++
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMP---ME 644

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           P        LS C   G +E G+       + AS+ D 
Sbjct: 645 PPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDG 682


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 256/860 (29%), Positives = 409/860 (47%), Gaps = 178/860 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  HA IL      + FL N LI +YSKC +                            
Sbjct: 65  GKCTHARILALEENPERFLVNNLISMYSKCGS---------------------------- 96

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRN--GLEE---KALSVYNKMSNEGFVPTHI 121
              L +A ++FD+MPER++VSWN++++A  ++  G+ E   +A  ++  +  +    + +
Sbjct: 97  ---LTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRM 153

Query: 122 TLASVFKASTALLDVEHGRRC-----HGLVIKIGLDKNIYVANALLSL------------ 164
           TL+ + K     L +  G  C     HG   KIGLD + +VA AL+++            
Sbjct: 154 TLSPMLK-----LCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRV 208

Query: 165 -------------------YAKCGWTKHAVPVFEEMS----EPNEVTF------------ 189
                              Y + G+ + A+ +          PNE+T             
Sbjct: 209 LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSE 268

Query: 190 ----------------------TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
                                   ++SG     +    L+ F  M+   +  D V+   V
Sbjct: 269 AGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILV 328

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           L    R       D  A           GQQVHC+ +KLG +  L +SNSL++MY K   
Sbjct: 329 LATAVR------LDSLAL----------GQQVHCMALKLGLDLMLTVSNSLINMYCKLRK 372

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           +  A  +F+N+ ER ++SWN +IAG  Q     +A+ L  ++  CG +PD  T  ++L A
Sbjct: 373 IGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKA 432

Query: 348 -----------------------------------------CVRSGDIKTGREMFDSMPS 366
                                                    C++  ++  GR  FD    
Sbjct: 433 ASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNFD---- 488

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
             + +WNAM+S Y+QS +  + ++LF  M  +G + D  TLA +L +C  +  +  GKQV
Sbjct: 489 --LVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQV 546

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           HA ++K+   +D +V+SG++ +Y KC     A+  F  IP  D V W ++I+G   N  +
Sbjct: 547 HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEE 606

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
             A   F QMR   + P +F+ AT+  + + L++  QGRQ+HA   K    +D FVG++L
Sbjct: 607 ERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSL 666

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           ++MY KCG I  A   F  +   N   WN M+ G AQ+G G EA++L+K M + G+KPD 
Sbjct: 667 VDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDK 726

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           +TF+ +L+ACSHSGLV    +   SM  D+G++P ++HY+C+ D LGRAG   EAE LID
Sbjct: 727 VTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLID 786

Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDD 726
            M  +    ++  LL++CR+  +    KR A +L  L+P +S+ Y LL+N+Y++  +WD+
Sbjct: 787 SMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDE 846

Query: 727 LRAVRELMSENCIVKDPAYS 746
           ++  R +M  + + KDP +S
Sbjct: 847 MKLARTMMKGHKVKKDPGFS 866



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 149/565 (26%), Positives = 276/565 (48%), Gaps = 40/565 (7%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D+  G+  H  ++ +  +   ++ N L+S+Y+KCG   +A  VF++M E + V++ ++++
Sbjct: 61  DLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILA 120

Query: 195 GLAKT-----DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             A++     + V EA  +FR++ +  V    ++LS +L +C   G    S+ F      
Sbjct: 121 AYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESF------ 174

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                     H    K+G + D  ++ +L+++Y K G +    V+F  +P R VV WN+M
Sbjct: 175 ----------HGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLM 224

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----RSGDIKTGREMFDSMP 365
           +  Y +     +AI+L     + G  P+E+T + +L         +G +K+     D+  
Sbjct: 225 LKAYLEMGFKEEAIDLSSAFHTSGLHPNEIT-LRLLSRISGDDSEAGQVKSFENGNDASA 283

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
              + S N +LS Y  +  +   +K F +M    ++ D+ T  ++L++   +  L  G+Q
Sbjct: 284 VSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQ 343

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           VH  +LK    +   V++ LI +Y K ++  LA  VF+ + E D++ WNS+IAG++ + L
Sbjct: 344 VHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDL 403

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGS 544
           ++EA   F Q+ +  + P  ++  +VL + + L       +Q+H    K   V D FV +
Sbjct: 404 EVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVST 463

Query: 545 ALIEMYC-----KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           ALI+ Y      K  ++   R  FD+      V WN M+ GY Q+  G + + L+  M  
Sbjct: 464 ALIDAYSRNRCMKEAEVLFGRNNFDL------VAWNAMMSGYTQSHDGHKTLELFALMHK 517

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
            G + DD T   +L  C     ++ G ++ ++  +  G +  L   + ++D   + G   
Sbjct: 518 QGERSDDFTLATVLKTCGFLFAINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVKCGDMS 576

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSC 684
            A+   D +P  DD V W  L+S C
Sbjct: 577 AAQFAFDSIPVPDD-VAWTTLISGC 600


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/776 (30%), Positives = 392/776 (50%), Gaps = 85/776 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA +LR+ L  DTFL + L+ +Y                               CK
Sbjct: 69  GQELHARLLRSALHPDTFLLDSLLNMY-------------------------------CK 97

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L  A ++FD MP R++V+W  +ISA    G  ++AL ++ +M+ EG  P   TLASV
Sbjct: 98  CGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASV 157

Query: 127 FKASTALLDVEHGRRCHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
            KA +     +   + HG V+K+ GLD + YV ++L+  Y  CG    A  V   + E +
Sbjct: 158 LKACSGGSHSKFTHQVHGQVVKLNGLD-DPYVGSSLVEAYTSCGELDAAETVLLGLPERS 216

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +V++ A+++G A+       + +   ++     I   +L +VL  C   G          
Sbjct: 217 DVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAK------- 269

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                    +GQ VH   IK G E D  L++ L++MY++    + A  +F  + E  VV 
Sbjct: 270 ---------YGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVH 320

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD-----------I 354
            + MI+ + +   + +A++L  +M   G +P+    + +     R+GD           +
Sbjct: 321 CSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIV 380

Query: 355 KTGREM------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
           K+G  M                        FD +  P   SWN +LS++    N ++ ++
Sbjct: 381 KSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLR 440

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +F++M   G   ++ T   +L  C ++  L  G QVHA  LK+    D  V+  L+ +Y+
Sbjct: 441 IFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYA 500

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           +      A  VF ++ E D   W  +++G +      +   +F+ M +  + P+  + A 
Sbjct: 501 QSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAV 560

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
            LS C+ ++S   G Q+H+   K G+ N   V  AL++MY KCG+I  A   F     ++
Sbjct: 561 SLSVCSDMASLGSGLQLHSWAIKSGW-NSSVVSGALVDMYVKCGNIADAEMLFHESETRD 619

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V WN +I GY+Q+G+G +A+  +K M+  G +PD ITFV +L+ACSH+GL++ G + F 
Sbjct: 620 QVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFK 679

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           S+   +G+ P ++HY CM+D L +AG   EAE LI++MP   D  IW  +L +CR+H N+
Sbjct: 680 SLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNI 739

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +A+RAAE LF L+P +++   LL+NIY+ LGRW D+  VR ++ ++ + K+P  S
Sbjct: 740 EIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCS 795



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 266/589 (45%), Gaps = 54/589 (9%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           +  G+  H  +++  L  + ++ ++LL++Y KCG    A  VF+ M   + V +TAM+S 
Sbjct: 66  LRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISA 125

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
                   +AL+MF  M ++ ++ +  +L+SVL  C+             S +KF+  VH
Sbjct: 126 HTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACS-----------GGSHSKFTHQVH 174

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           GQ      +KL    D ++ +SL++ Y   G++D+AE +   LPERS VSWN ++ GY +
Sbjct: 175 GQ-----VVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYAR 229

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----------------- 358
                + + +++++ + G E  + T   +L  C+  G  K G+                 
Sbjct: 230 HGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVL 289

Query: 359 ------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                             E+F  +  P V   +AM+S + + +   EA+ LF +M   GV
Sbjct: 290 NSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGV 349

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           KP+      I    +  G     + VHA  +K+   +   V   ++ +Y K    + A  
Sbjct: 350 KPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATV 409

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
            F  I E D   WN++++     S   +    FKQM        ++++ +VL  C  L +
Sbjct: 410 TFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMN 469

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G QVHA I K G  ND  V   L++MY + G    A   F+ +  ++  +W  ++ G
Sbjct: 470 LRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSG 529

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           YA+    ++ V  ++ M+   ++P D T    L+ CS    +  G+++ +S  +  G   
Sbjct: 530 YAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQL-HSWAIKSGWNS 588

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
            +     ++D   + G+  +AEML  E   +D  V W  ++     H +
Sbjct: 589 SVVS-GALVDMYVKCGNIADAEMLFHESETRDQ-VAWNTIICGYSQHGH 635



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 135/263 (51%), Gaps = 4/263 (1%)

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           A  L  CA    L  G+++HA  L++A H D ++   L+ +Y KC R   A RVF  +P 
Sbjct: 54  AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPH 113

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            DIV W +MI+  +      +A   F +M Q  + P  F+ A+VL +C+  S S    QV
Sbjct: 114 RDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQV 173

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H Q+ K   ++D +VGS+L+E Y  CG++  A      +  ++ V+WN +++GYA++G  
Sbjct: 174 HGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDY 233

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
              + + + ++ASG +    T   +L  C   GL   G  +  S+ +  G+E      +C
Sbjct: 234 RRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASV-IKRGLETDNVLNSC 292

Query: 648 MIDCLGR---AGHFHEAEMLIDE 667
           +++   R   A   +E  + IDE
Sbjct: 293 LVEMYSRCLSAEEAYEVFIRIDE 315


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 234/782 (29%), Positives = 394/782 (50%), Gaps = 87/782 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ LHA +L++ L    FL  +L+ +Y KC +                       
Sbjct: 60  KALPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGS----------------------- 94

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   L+ A K+FDEM ER + +WN ++ A V +G   +A+ +Y +M   G      
Sbjct: 95  --------LKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDAC 146

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE- 180
           T  SV KA  AL +   G   HG+ +K G  + ++V NAL+++Y KCG    A  +F+  
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGI 206

Query: 181 -MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            M + + V++ +++S      + +EAL +FR M    V+ ++ +  + L        GVE
Sbjct: 207 MMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQ-------GVE 259

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
              F +          G  +H   +K    AD++++N+L+ MYAK G M+ AE +F+++ 
Sbjct: 260 DPSFVKL---------GMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASML 310

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            R  VSWN +++G  Q      A+   + M++   +PD+V+ +N++ A  RSG++  G+E
Sbjct: 311 CRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKE 370

Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
           +                                   F+ M    + SW  +++ Y+Q+E 
Sbjct: 371 VHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNEC 430

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
           H EAI LFR++Q +G+  D   +  +L +C+ +      +++H    K     D  + + 
Sbjct: 431 HLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKR-DLADIMLQNA 489

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           ++ +Y +    + A R F  I   DIV W SMI     N L +EA   F  ++Q  + P 
Sbjct: 490 IVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPD 549

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
             +  + LS+ A LSS  +G+++H  + + G+  +  + S+L++MY  CG +  +R+ F 
Sbjct: 550 SIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFH 609

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            +  ++ + W  MI+    +G G+EA+ L+K M    V PD ITF+A+L ACSHSGL+  
Sbjct: 610 SVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVE 669

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G   F  M+  + +EP  +HY CM+D L R+    EA   +  MP K    +W  LL +C
Sbjct: 670 GKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGAC 729

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
            +H+N  L + AA+EL + D KNS  Y+L++NI+++ GRW+D+  VR  M  N + K+P 
Sbjct: 730 HIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPG 789

Query: 745 YS 746
            S
Sbjct: 790 CS 791



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 142/283 (50%), Gaps = 18/283 (6%)

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           +++L  C A+  L  G+Q+HA  LK  SH+  ++A+ L+ +Y KC   + A +VF  + E
Sbjct: 50  SLLLDLCVAVKALPQGQQLHARLLK--SHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTE 107

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
             I  WN+M+     +   +EA   +K+MR   +     +F +VL +C  L  S  G ++
Sbjct: 108 RTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD--MMHGKNTVTWNEMIHGYAQNG 585
           H    K G+   +FV +ALI MY KCGD+ GAR  FD  MM  ++TV+WN +I  +   G
Sbjct: 168 HGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEG 227

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
              EA+ L++ M   GV  +  TFVA L        V +G+ I       HG     +H+
Sbjct: 228 KCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI-------HGAALKSNHF 280

Query: 646 T------CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
                   +I    + G   +AE +   M C+ D V W  LLS
Sbjct: 281 ADVYVANALIAMYAKCGRMEDAERVFASMLCR-DYVSWNTLLS 322



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 4/174 (2%)

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +L  C  + +  QG+Q+HA++ K       F+ + L+ MY KCG +  A + FD M  + 
Sbjct: 52  LLDLCVAVKALPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVFDEMTERT 109

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
             TWN M+  +  +G   EA+ LYK+M   GV  D  TF ++L AC   G   +G EI +
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEI-H 168

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE-MPCKDDPVIWEVLLSS 683
            + +  G    +     +I   G+ G    A +L D  M  K+D V W  ++S+
Sbjct: 169 GVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/702 (32%), Positives = 367/702 (52%), Gaps = 57/702 (8%)

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
           R+   WN LI A    G+ +     YN M   G  P   T   V K  +  ++V  GR  
Sbjct: 101 RSAFLWNTLIRANSIAGVFD-GFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREV 159

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           HG+  K+G D +++V N LL+ Y  CG    A+ VF+EM E ++V++  ++   +     
Sbjct: 160 HGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFY 219

Query: 203 VEALEMFRLMI--RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
            EAL  FR+M+  +  +  D V++ SVL VCA            ++++K    V  + VH
Sbjct: 220 EEALGFFRVMVAAKPGIQPDLVTVVSVLPVCA------------ETEDK----VMARIVH 263

Query: 261 CLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           C  +K+G     + + N+L+D+Y K G   +++ +F  + ER+V+SWN +I  +  + + 
Sbjct: 264 CYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKY 323

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-------------------- 359
             A+++ + M   G  P+ VT  +ML      G  K G E                    
Sbjct: 324 MDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSL 383

Query: 360 ---------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
                          +F+ M   ++ SWNAM+++++++    EA++L R+MQ +G  P+ 
Sbjct: 384 IDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNN 443

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
            T   +L +CA +G L  GK++HA  ++  S +D +V++ L  +YSKC    LA+ VF+ 
Sbjct: 444 VTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN- 502

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           I   D V +N +I G S  +  +E+   F +MR   M P   SF  V+S+CA L+   QG
Sbjct: 503 ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQG 562

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           +++H  + +  +   +FV ++L+++Y +CG I  A + F  +  K+  +WN MI GY   
Sbjct: 563 KEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMR 622

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G  D A+ L++ M   GV+ D ++FVA+L+ACSH GL++ G + F  M  D  +EP   H
Sbjct: 623 GELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFK-MMCDLNIEPTHTH 681

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y CM+D LGRAG   EA  LI  +    D  IW  LL +CR+H N+ L   AAE LF L 
Sbjct: 682 YACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELK 741

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           P++   Y LL+N+Y+   RWD+   VRELM      K+P  S
Sbjct: 742 PQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCS 783



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 175/661 (26%), Positives = 306/661 (46%), Gaps = 126/661 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H    + G   D F+ N L+  Y  C     A  +FD+MP +D  SWN +      
Sbjct: 156 GREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTV------ 209

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITLA 124
                                    I     +G  E+AL  +  M  +  G  P  +T+ 
Sbjct: 210 -------------------------IGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVV 244

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           SV        D    R  H   +K+G L  ++ V NAL+ +Y KCG  K +  VF+E+ E
Sbjct: 245 SVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDE 304

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N +++ A+++  +   + ++AL++FRLMI + +  +SV++SS+L V    G      +F
Sbjct: 305 RNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELG------LF 358

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G +VH  ++K+  E+D+ +SNSL+DMYAK+G    A  IF+ +  R++
Sbjct: 359 KL----------GMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNI 408

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           VSWN MIA + +     +A+EL+++M++ G  P+ VT  N+L AC R G +  G+E+   
Sbjct: 409 VSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHAR 468

Query: 361 -------FDSMPSPSVS------------------------SWNAMLSSYSQSENHKEAI 389
                   D   S +++                        S+N ++  YS++ +  E++
Sbjct: 469 IIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISVRDEVSYNILIIGYSRTNDSLESL 528

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +LF EM+  G++PD  +   ++S+CA +  +  GK++H   ++   H   +VA+ L+ +Y
Sbjct: 529 RLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLY 588

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           ++C R +LA +VF+ I   D+  WN+MI G  +      A   F+ M+++ +     SF 
Sbjct: 589 TRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFV 648

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
            VLS+C+           H  + + G                        R++F MM   
Sbjct: 649 AVLSACS-----------HGGLIEKG------------------------RKYFKMMCDL 673

Query: 570 NT----VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           N       +  M+    + G  +EA  L + +    + PD   + A+L AC   G +++G
Sbjct: 674 NIEPTHTHYACMVDLLGRAGLMEEAADLIRGL---SIIPDTNIWGALLGACRIHGNIELG 730

Query: 626 V 626
           +
Sbjct: 731 L 731



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 220/457 (48%), Gaps = 84/457 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTF-LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           V  +++H + L+ GL      + N L+++Y KC +  +++                    
Sbjct: 257 VMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASK-------------------- 296

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                      K+FDE+ ERNV+SWN +I++    G    AL V+  M +EG  P  +T+
Sbjct: 297 -----------KVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTI 345

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +S+      L   + G   HG  +K+ ++ +++++N+L+ +YAK G ++ A  +F +M  
Sbjct: 346 SSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGV 405

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V++ AM++  A+     EA+E+ R M  K  + ++V+ ++VL  CAR G        
Sbjct: 406 RNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLG-------- 457

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                    NV G+++H   I++G   DL +SN+L DMY+K G ++ A+ +F N+  R  
Sbjct: 458 -------FLNV-GKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVF-NISVRDE 508

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           VS+N++I GY +   S +++ L   M+  G  PD V+ + ++ AC     I+ G+E+   
Sbjct: 509 VSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGL 568

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           F  + +  V+SWN M+  Y        A
Sbjct: 569 LVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTA 628

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           I LF  M+  GV+ D  +   +LS+C+  G++E G++
Sbjct: 629 INLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRK 665



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 208/415 (50%), Gaps = 29/415 (6%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D++  N+++    KS     A  +F++M  RN+VSWN +I+   RN LE +A+ +  +M 
Sbjct: 376 DVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQ 435

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            +G  P ++T  +V  A   L  +  G+  H  +I++G   +++V+NAL  +Y+KCG   
Sbjct: 436 AKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLN 495

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF  +S  +EV++  ++ G ++T+  +E+L +F  M    +  D VS   V+  CA
Sbjct: 496 LAQNVF-NISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACA 554

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                         +  F R   G+++H L ++  F   L ++NSLLD+Y + G +D A 
Sbjct: 555 --------------NLAFIR--QGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLAT 598

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  +  + V SWN MI GYG + +   AI L + MK  G E D V+ + +L AC   G
Sbjct: 599 KVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGG 658

Query: 353 DIKTGREMFDSM----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
            I+ GR+ F  M      P+ + +  M+    ++   +EA  L R +    + PD     
Sbjct: 659 LIEKGRKYFKMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLS---IIPDTNIWG 715

Query: 409 IILSSCAAMGILESGKQV--HAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            +L +C   G +E G     H   LK   H   Y+   L  +Y++ +R + A +V
Sbjct: 716 ALLGACRIHGNIELGLWAAEHLFELK-PQHCGYYIL--LSNMYAEAERWDEANKV 767



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 176/372 (47%), Gaps = 10/372 (2%)

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           S S   WN ++ + S +    +    +  M   GVKPD  T   +L  C+    +  G++
Sbjct: 100 SRSAFLWNTLIRANSIAGVF-DGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGRE 158

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           VH  + K     D +V + L+  Y  C     A +VF  +PE D V WN++I   SL+  
Sbjct: 159 VHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGF 218

Query: 486 DIEAFMFFKQM--RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND-IFV 542
             EA  FF+ M   +  + P   +  +VL  CA+       R VH    K G +   + V
Sbjct: 219 YEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKV 278

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
           G+AL+++Y KCG    +++ FD +  +N ++WN +I  ++  G   +A+ +++ MI  G+
Sbjct: 279 GNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGM 338

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
           +P+ +T  ++L      GL  +G+E+ +   L   +E  +     +ID   ++G    A 
Sbjct: 339 RPNSVTISSMLPVLGELGLFKLGMEV-HGFSLKMAIESDVFISNSLIDMYAKSGSSRIAS 397

Query: 663 MLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL-LANIYSSL 721
            + ++M  + + V W  ++++    A  RL   A E + ++  K   P ++   N+  + 
Sbjct: 398 TIFNKMGVR-NIVSWNAMIAN---FARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPAC 453

Query: 722 GRWDDLRAVREL 733
            R   L   +E+
Sbjct: 454 ARLGFLNVGKEI 465


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 224/665 (33%), Positives = 368/665 (55%), Gaps = 53/665 (7%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P     A++ + S +   + H +  HG +I  GL  + ++AN L+++ +K     +A  V
Sbjct: 47  PKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVV 106

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS-IDSVSLSSVLGVCAREGC 236
           F++M   N +T+++M+S  ++     EAL +F  + RK+    +   L+SV+  C + G 
Sbjct: 107 FDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGV 166

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
            VE                G Q+H   ++ GF+ D+++  SL+D Y+KNG+++ A ++F 
Sbjct: 167 -VEK---------------GAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFD 210

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------- 348
            L E++ V+W  +IAGY +  +S  ++EL  +M+     PD     ++L AC        
Sbjct: 211 QLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG 270

Query: 349 --------VRSGD-------------------IKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                   +R G                    +K GR++FD M   ++ SW  M+S Y Q
Sbjct: 271 GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ 330

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +    EA+KLF EM   G KPD      +L+SC +   LE G+QVHA ++K     D +V
Sbjct: 331 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFV 390

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            +GLI +Y+K      A++VF  + E +++ +N+MI G S      EA   F +MR    
Sbjct: 391 KNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQ 450

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P +F+FA ++++ + L+S   G+Q H Q+ K G     FV +AL++MY KCG I  AR+
Sbjct: 451 KPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARK 510

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F+    ++ V WN MI  +AQ+G  +EA+ ++++M+  G++P+ +TFVA+L+ACSH+G 
Sbjct: 511 MFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGR 570

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           V+ G+  FNSM    G++P  +HY C++  LGR+G   EA+  I++MP +   ++W  LL
Sbjct: 571 VEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLL 629

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           S+CR+  NV L K AAE     DPK+S  Y LL+NI++S G W D++ VR+ M  + +VK
Sbjct: 630 SACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVK 689

Query: 742 DPAYS 746
           +P  S
Sbjct: 690 EPGRS 694



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/599 (27%), Positives = 281/599 (46%), Gaps = 91/599 (15%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K++H  I+ +GL  DTFL N LI + SK                               S
Sbjct: 69  KIIHGQIIVSGLQSDTFLANILINVCSK-------------------------------S 97

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLASV 126
           D ++ A  +FD+MP +N+++W++++S   + G  E+AL V+  +  + G  P    LASV
Sbjct: 98  DRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASV 157

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A T L  VE G + HG V++ G D+++YV  +L+  Y+K G  + A  VF+++SE   
Sbjct: 158 IRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTA 217

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR----EGCGVESDV 242
           VT+T +++G  K  R   +LE+F  M    V  D   +SSVL  C+     EG       
Sbjct: 218 VTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG------- 270

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+Q+H   ++ G E D+ + N L+D Y K   + +   +F  +  ++
Sbjct: 271 -------------GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKN 317

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--- 359
           ++SW  MI+GY Q     +A++L   M   G++PD     ++L +C     ++ GR+   
Sbjct: 318 IISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHA 377

Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                           +FD M   +V S+NAM+  YS  E   E
Sbjct: 378 YTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSE 437

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A++LF EM+ R  KP+  T A ++++ + +  L  G+Q H   +K       +V + L+ 
Sbjct: 438 ALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVD 497

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+KC   E A ++F+     D+VCWNSMI+  + +    EA   F++M +  + P   +
Sbjct: 498 MYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVT 557

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           F  VLS+C+       G      +   G        + ++ +  + G ++ A++F + M
Sbjct: 558 FVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKM 616



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 207/453 (45%), Gaps = 84/453 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH  ++R+G   D ++   LI+ YSK  N   A+ +FD++  K   +W  I++   K
Sbjct: 170 GAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTK 229

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 + +LF +M E NV                               VP    ++SV
Sbjct: 230 CGRSAVSLELFAQMRETNV-------------------------------VPDRYVVSSV 258

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + L  +E G++ H  V++ G + ++ V N L+  Y KC   K    +F++M   N 
Sbjct: 259 LSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNI 318

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC-AREGCGVESDVFAQ 245
           +++T M+SG  +     EA+++F  M R     D  + +SVL  C +RE           
Sbjct: 319 ISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE-------- 370

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+QVH  TIK   E+D  + N L+DMYAK+  +  A+ +F  + E++V+S
Sbjct: 371 ---------QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVIS 421

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           +N MI GY  + + ++A+EL   M+    +P+E T   ++ A                  
Sbjct: 422 YNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLV 481

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G I+  R+MF+S     V  WN+M+S+++Q    +EA+ 
Sbjct: 482 KMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALG 541

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +FREM   G++P+  T   +LS+C+  G +E G
Sbjct: 542 MFREMMKEGIQPNYVTFVAVLSACSHAGRVEDG 574



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 206/432 (47%), Gaps = 54/432 (12%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +HA++LR G   D  + N LI+ Y+KCN   + + LFD+M  K+I SW        
Sbjct: 270 GGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTT------ 323

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    +IS  ++N  + +A+ ++ +M+  G+ P      S
Sbjct: 324 -------------------------MISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTS 358

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  +  +   +E GR+ H   IK  L+ + +V N L+ +YAK      A  VF+ M+E N
Sbjct: 359 VLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQN 418

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++ AM+ G +  +++ EALE+F  M  +    +  + ++++   +             
Sbjct: 419 VISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAAS------------- 465

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +   HGQQ H   +K+G +    ++N+L+DMYAK G ++ A  +F++   R VV 
Sbjct: 466 ---NLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVC 522

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI+ + Q  ++ +A+ + + M   G +P+ VT + +L AC  +G ++ G   F+SMP
Sbjct: 523 WNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMP 582

Query: 366 S----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  ++S   +S    EA +   +M    ++P       +LS+C   G +E
Sbjct: 583 GFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMP---IEPAAIVWRSLLSACRIAGNVE 639

Query: 422 SGKQVHAASLKT 433
            GK     ++ T
Sbjct: 640 LGKYAAEMAIST 651



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 3/289 (1%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +Q   ++P R   A +L    +   +   K +H   + +    D ++A+ LI + SK  R
Sbjct: 40  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLS 513
            + A  VF ++P  +++ W+SM++  S      EA M F  + R++  +P +F  A+V+ 
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           +C +L    +G Q+H  + + G+  D++VG++LI+ Y K G+I  AR  FD +  K  VT
Sbjct: 160 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVT 219

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W  +I GY + G    ++ L+  M  + V PD     ++L+ACS    ++ G +I ++  
Sbjct: 220 WTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQI-HAYV 278

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           L  G E  +     +ID   +         L D+M  K + + W  ++S
Sbjct: 279 LRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVK-NIISWTTMIS 326



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 31/235 (13%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++A   G+ +HA+ ++  L  D F+ N LI++Y+K N    A+ +FD M  +++ S+NA+
Sbjct: 366 REALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAM 425

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +      + L  A +LF EM  R                L++               P  
Sbjct: 426 IEGYSSQEKLSEALELFHEMRVR----------------LQK---------------PNE 454

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T A++  A++ L  + HG++ H  ++K+GLD   +V NAL+ +YAKCG  + A  +F  
Sbjct: 455 FTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNS 514

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
               + V + +M+S  A+     EAL MFR M+++ +  + V+  +VL  C+  G
Sbjct: 515 SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAG 569


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/647 (33%), Positives = 349/647 (53%), Gaps = 53/647 (8%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           +  GRR   ++   G+  +  +   L+ +Y KCG  K    VF+++SE     +  M+S 
Sbjct: 166 IRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISE 225

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
            + +    E++ +F+ M+   +  +S + SS+L   A                  +R   
Sbjct: 226 YSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFA----------------AVARVEE 269

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+QVH L  KLGF +   + NSL+  Y     +  A+ +F  L +R V+SWN MI+GY +
Sbjct: 270 GRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVK 329

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------------------- 349
                + IE+  +M   G + D  T +N+ VAC                           
Sbjct: 330 NGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVR 389

Query: 350 ----------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                     + GD+ +   +F+ M   +V SW +M++ Y +      AIKLF EM+ RG
Sbjct: 390 FNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRG 449

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V PD   +  IL++CA  G L+SGK VH    +     +++V++ L  +Y+KC   + A 
Sbjct: 450 VVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAH 509

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            VF  + + D++ WN+MI G + NSL  EA   F +M Q E  P   + A +L +CA L+
Sbjct: 510 DVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM-QRESKPDGTTVACILPACASLA 568

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +  +GR++H    ++GY  D +V +A+++MY KCG +  AR  FDM+  K+ V+W  MI 
Sbjct: 569 ALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIA 628

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GY  +GYG EA+  +  M  +G++PD+++F++IL ACSHSGL+D G +IFN M+ +  +E
Sbjct: 629 GYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIE 688

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P L+HY CM+D L R G+  +A   I  MP K D  IW  LL  CR+H +V+LA++ AE 
Sbjct: 689 PNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAER 748

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +F L+P+N+  Y LLANIY+   +W++++ +R+ + +  + K+P  S
Sbjct: 749 IFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCS 795



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 169/618 (27%), Positives = 293/618 (47%), Gaps = 86/618 (13%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           +K+   G+ + + I  +G+  D  L  +L+ +Y KC +    + +FDK+    I+ WN +
Sbjct: 163 RKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLM 222

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +S    S +   +  LF +M E                                G  P  
Sbjct: 223 ISEYSGSGNYGESINLFKQMLEL-------------------------------GIKPNS 251

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T +S+ K   A+  VE GR+ HGL+ K+G +    V N+L+S Y      + A  +F+E
Sbjct: 252 YTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDE 311

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           +++ + +++ +M+SG  K       +E+F  M+   V ID  ++ +V   CA  G     
Sbjct: 312 LTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGT---- 367

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                        + G+ +H  +IK    + ++  +N+LLDMY+K GD++SA  +F  + 
Sbjct: 368 ------------LLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMD 415

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR- 358
           E++VVSW  MI GY ++  S  AI+L   MKS G  PD     ++L AC  +G++K+G+ 
Sbjct: 416 EKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKI 475

Query: 359 ----------------------------------EMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                             ++F  M    V SWN M+  Y+++  
Sbjct: 476 VHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSL 535

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
             EA+ LF EMQ R  KPD TT+A IL +CA++  L+ G+++H  +L+     D YV + 
Sbjct: 536 PNEALTLFAEMQ-RESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNA 594

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           ++ +Y KC    LA  +F  IP  D+V W  MIAG  ++    EA   F QMR   + P 
Sbjct: 595 VVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPD 654

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFF 563
           + SF ++L +C+      +G ++   ++K+  +  ++   + ++++  + G++  A +F 
Sbjct: 655 EVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFI 714

Query: 564 DMMHGKNTVT-WNEMIHG 580
             M  K   T W  ++ G
Sbjct: 715 KAMPIKPDATIWGALLCG 732



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 206/414 (49%), Gaps = 57/414 (13%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK+LH++ ++    D +    N L+++YSKC                             
Sbjct: 371 GKVLHSYSIKAATLDREVRFNNTLLDMYSKCG---------------------------- 402

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
              DL  A ++F+ M E+ VVSW ++I+  VR GL + A+ ++++M + G VP    + S
Sbjct: 403 ---DLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTS 459

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A     +++ G+  H  + +  L+ N +V+NAL  +YAKCG  K A  VF  M + +
Sbjct: 460 ILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKD 519

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++  M+ G  K     EAL +F  M R++   D  +++ +L  CA           A 
Sbjct: 520 VISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACAS---------LAA 569

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D        G+++H   ++ G+  D +++N+++DMY K G +  A  +F  +P + +VS
Sbjct: 570 LDK-------GREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVS 622

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W VMIAGYG     ++AI    +M+  G EPDEV+ I++L AC  SG +  G ++F+ M 
Sbjct: 623 WTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMK 682

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                 P++  +  M+   +++ N  +A K  + M    +KPD T    +L  C
Sbjct: 683 KECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMP---IKPDATIWGALLCGC 733



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 163/366 (44%), Gaps = 35/366 (9%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           IL  CA    +  G++V +    +   ID  +   L+ +Y KC   +    VF ++ E  
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           I  WN MI+  S +    E+   FKQM +  + P  ++F+++L   A ++   +GRQVH 
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            I K G+ +   V ++LI  Y     +  A++ FD +  ++ ++WN MI GY +NG  D 
Sbjct: 276 LICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDR 335

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI----FNSMQLDHGVE---PIL 642
            + ++  M+  GV  D  T V +  AC++ G + +G  +      +  LD  V     +L
Sbjct: 336 GIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLL 395

Query: 643 DHY------------------------TCMIDCLGRAGHFHEAEMLIDEMPCKD-DPVIW 677
           D Y                        T MI    R G    A  L DEM  +   P ++
Sbjct: 396 DMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVY 455

Query: 678 EV--LLSSCRLHANVRLAKRAAEELFRLD-PKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
            V  +L++C ++ N++  K   + +   +   NS   + L ++Y+  G   D   V   M
Sbjct: 456 AVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHM 515

Query: 735 SENCIV 740
            +  ++
Sbjct: 516 KKKDVI 521



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/402 (21%), Positives = 165/402 (41%), Gaps = 86/402 (21%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +GK++H +I  N L  ++F+ N L ++Y+KC +   A  +F  M  KD+ SWN       
Sbjct: 472 SGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNT------ 525

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    +I    +N L  +AL+++ +M  E   P   T+A 
Sbjct: 526 -------------------------MIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVAC 559

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A  +L  ++ GR  HG  ++ G  ++ YV NA++ +Y KCG    A  +F+ +   +
Sbjct: 560 ILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKD 619

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFA 244
            V++T M++G        EA+  F  M    +  D VS  S+L  C+  G   E   +F 
Sbjct: 620 LVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIF- 678

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                   N+  ++          E +L     ++D+ A+ G++  A      +P     
Sbjct: 679 --------NIMKKECQ-------IEPNLEHYACMVDLLARTGNLVKAHKFIKAMP----- 718

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
                                         +PD      +L  C    D+K   ++ + +
Sbjct: 719 -----------------------------IKPDATIWGALLCGCRIHHDVKLAEKVAERI 749

Query: 365 --PSPSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGVKPD 403
               P  + +  +L++ Y+++E  +E  KL +++  RG+K +
Sbjct: 750 FELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKN 791



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 18/184 (9%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++ ++L  CA+  S   GR+V + IE  G + D  +G  L+ MY KCGD+   R  FD +
Sbjct: 152 AYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKL 211

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
                  WN MI  Y+ +G   E++ L+K M+  G+KP+  TF +IL   +    V+ G 
Sbjct: 212 SESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGR 271

Query: 627 EIFNSMQLDHGVEPIL--DHYTCMIDCL------GRAGHFHEAEMLIDEMPCKDDPVIWE 678
           ++       HG+   L  + Y  +++ L      GR      A+ L DE+  + D + W 
Sbjct: 272 QV-------HGLICKLGFNSYNTVVNSLISFYFVGR--KVRCAQKLFDELTDR-DVISWN 321

Query: 679 VLLS 682
            ++S
Sbjct: 322 SMIS 325


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 241/780 (30%), Positives = 400/780 (51%), Gaps = 84/780 (10%)

Query: 26  CNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNV 85
           C+  I    +      A+ +FD MP +DI +WN+++SA C +   + A  L+D +   N+
Sbjct: 37  CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM 96

Query: 86  VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGL 145
            +   L+S   R G   +A  V++ M     V  +  ++   +      D+   RR    
Sbjct: 97  RTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNG----DITMARR---- 148

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
           +      +++   N++L+ Y        A  +FE+M E N V++T M+SG  + +   +A
Sbjct: 149 LFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKA 208

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
            ++F  M R+ +  D  + +S L   A +G G   DV              + +  L +K
Sbjct: 209 WDIFCKMHREGLLPDQSNFASALS--AVKGLG-NLDVL-------------ESLRVLALK 252

Query: 266 LGFEADLHLSNSLLDMYAKNGD-MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
            GFE D+ +  ++L++Y+++   +D+A   F ++ ER+  +W+ MIA      +   AI 
Sbjct: 253 TGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIA 312

Query: 325 LLQR---------------MKSCGF------------EPDEVTSINMLVACVRSGDIKTG 357
           + +R               +  CG             EP  V+   ++   +++G +   
Sbjct: 313 VYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEA 372

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           +E+FD MP  +  SW  M++ Y+Q+   +EA+ L +E+   G+ P  ++L  I  +C+ +
Sbjct: 373 KELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNI 432

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
             LE+G QVH+ ++K     +++  + LI +Y KC+  E A +VF R+   DIV WNS +
Sbjct: 433 VALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFL 492

Query: 478 AGLSLNSL---------------DI----------------EAFMFFKQMRQNEMYPTQF 506
           A L  N L               D+                EA   FK M      P   
Sbjct: 493 AALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSP 552

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
               +L  C  L +S  G+Q+H    K G  +++ V +ALI MY KCG    +R+ FD+M
Sbjct: 553 ILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLM 611

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++  TWN +I GYAQ+G G EA+++Y+ M ++GV P+++TFV +L ACSH+GLVD G 
Sbjct: 612 EERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGW 671

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           + F SM  D+G+ P+ +HY CM+D LGR G    AE  I +MP + D VIW  LL +C++
Sbjct: 672 KFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKI 731

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           H N  + KRAAE+LFR++P N+  Y +L+NIYSSLG W ++  VR++M +  ++K+P  S
Sbjct: 732 HKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCS 791



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 17/306 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H+  ++ G   ++F CN LI +Y KC N   A+ +F +M  KDI SWN+ L+A  +
Sbjct: 438 GTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQ 497

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +D L+ A   FD M  R+ VSW  +ISA        +A+  +  M  E  +P    L  +
Sbjct: 498 NDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTIL 557

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                +L   + G++ H + IK+G+D  + VANAL+S+Y KCG    +  +F+ M E + 
Sbjct: 558 LGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDI 616

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            T+  +++G A+     EA++M++ M    V  + V+   +L  C+  G   E   F +S
Sbjct: 617 FTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKS 676

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVS 305
                          ++   G          ++D+  + GD+  AE    ++P E   V 
Sbjct: 677 ---------------MSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVI 721

Query: 306 WNVMIA 311
           W+ ++ 
Sbjct: 722 WSALLG 727


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 241/780 (30%), Positives = 400/780 (51%), Gaps = 84/780 (10%)

Query: 26  CNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNV 85
           C+  I    +      A+ +FD MP +DI +WN+++SA C +   + A  L+D +   N+
Sbjct: 37  CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM 96

Query: 86  VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGL 145
            +   L+S   R G   +A  V++ M     V  +  ++   +      D+   RR    
Sbjct: 97  RTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNG----DITMARR---- 148

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
           +      +++   N++L+ Y        A  +FE+M E N V++T M+SG  + +   +A
Sbjct: 149 LFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKA 208

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
            ++F  M R+ +  D  + +S L   A +G G   DV              + +  L +K
Sbjct: 209 WDIFCKMHREGLLPDQSNFASALS--AVKGLG-NLDVL-------------ESLRVLALK 252

Query: 266 LGFEADLHLSNSLLDMYAKNGD-MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
            GFE D+ +  ++L++Y+++   +D+A   F ++ ER+  +W+ MIA      +   AI 
Sbjct: 253 TGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIA 312

Query: 325 LLQR---------------MKSCGF------------EPDEVTSINMLVACVRSGDIKTG 357
           + +R               +  CG             EP  V+   ++   +++G +   
Sbjct: 313 VYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEA 372

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           +E+FD MP  +  SW  M++ Y+Q+   +EA+ L +E+   G+ P  ++L  I  +C+ +
Sbjct: 373 KELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNI 432

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
             LE+G QVH+ ++K     +++  + LI +Y KC+  E A +VF R+   DIV WNS +
Sbjct: 433 VALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFL 492

Query: 478 AGLSLNSL---------------DI----------------EAFMFFKQMRQNEMYPTQF 506
           A L  N L               D+                EA   FK M      P   
Sbjct: 493 AALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSP 552

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
               +L  C  L +S  G+Q+H    K G  +++ V +ALI MY KCG    +R+ FD+M
Sbjct: 553 ILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLM 611

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++  TWN +I GYAQ+G G EA+++Y+ M ++GV P+++TFV +L ACSH+GLVD G 
Sbjct: 612 EERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGW 671

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           + F SM  D+G+ P+ +HY CM+D LGR G    AE  I +MP + D VIW  LL +C++
Sbjct: 672 KFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKI 731

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           H N  + KRAAE+LFR++P N+  Y +L+NIYSSLG W ++  VR++M +  ++K+P  S
Sbjct: 732 HKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCS 791



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 17/306 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H+  ++ G   ++F CN LI +Y KC N   A+ +F +M  KDI SWN+ L+A  +
Sbjct: 438 GTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQ 497

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +D L+ A   FD M  R+ VSW  +ISA        +A+  +  M  E  +P    L  +
Sbjct: 498 NDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTIL 557

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                +L   + G++ H + IK+G+D  + VANAL+S+Y KCG    +  +F+ M E + 
Sbjct: 558 LGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDI 616

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            T+  +++G A+     EA++M++ M    V  + V+   +L  C+  G   E   F +S
Sbjct: 617 FTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKS 676

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVS 305
                          ++   G          ++D+  + GD+  AE    ++P E   V 
Sbjct: 677 ---------------MSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVI 721

Query: 306 WNVMIA 311
           W+ ++ 
Sbjct: 722 WSALLG 727


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 248/779 (31%), Positives = 402/779 (51%), Gaps = 87/779 (11%)

Query: 28  RLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVS 87
           R+ EL ++      A+ +FD MPH+DI +WN+++SA C S  LE A  LFD +   NV +
Sbjct: 39  RIREL-ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRT 97

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
              L+S   R G    A  V++ M     V  +  ++   +      D+   RR    + 
Sbjct: 98  ATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNG----DITMARR----LF 149

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
                +++   N++++ Y        A  +F++M + N VT+T M+SG  + ++  +  +
Sbjct: 150 DAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWD 209

Query: 208 MFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
           +FR+M  +  S D  + +SVL  V   +  GV                  + +  L +K 
Sbjct: 210 IFRMMHHEGASPDQSNFASVLSAVTGLQDLGVL-----------------EVLRPLVLKT 252

Query: 267 GFEADLHLSNSLLDMYAKNGD-MDSAEVIFSNLPERSVVSWNVMIAG--YGQKYQSTKAI 323
           GFE+D+ +  S+L++Y ++   +D A   F  + ER+  +W+ MIA   +G +  +  A+
Sbjct: 253 GFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAV 312

Query: 324 -------------ELLQRMKSCG--------FE--PDE-VTSIN-MLVACVRSGDIKTGR 358
                         LL  +  CG        FE  PD  V S N M+   +++G +   +
Sbjct: 313 YGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAK 372

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           E+FD MP  +  SW  M++ Y+Q+   +EA+ L + +   G+ P  ++L     +C+ +G
Sbjct: 373 ELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIG 432

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            LE+G+QVH+ ++K     ++YV + LI +Y KC+  E   +VF+R+   D V WNS IA
Sbjct: 433 ALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIA 492

Query: 479 GLSLNSL--------------DI-----------------EAFMFFKQMRQNEMYPTQFS 507
            L  N++              D+                 EA  FFK M      P    
Sbjct: 493 ALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPI 552

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              +LS C  L S+  G+Q+H    K G  +++ V +AL+ MY KCG    + + FD M 
Sbjct: 553 LTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSME 611

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++  TWN  I G AQ+G G EA+++Y+ M + GV P+++TFV +L ACSH+GLVD G +
Sbjct: 612 ERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQ 671

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F SM  D+G+ P+L+HY CM+D LGR G    AE  I +MP + D VIW  LL +C++H
Sbjct: 672 FFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIH 731

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            N  + +RAAE+LF  +P N+  Y +L+NIYSSLG W ++  +R++M +  + K+P  S
Sbjct: 732 KNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCS 790



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 151/307 (49%), Gaps = 17/307 (5%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ +H+  ++ G   ++++CN LI +Y KC N    + +F++M  KD  SWN+ ++A  
Sbjct: 436 TGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALV 495

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           +++ LE A  +FD M  R+VVSW  +ISA  +    ++A+  +  M +E   P    L  
Sbjct: 496 QNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTI 555

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +      L   + G++ H + IK G+D  + VANAL+S+Y KCG    +  VF+ M E +
Sbjct: 556 LLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEERD 614

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             T+   ++G A+     EA++M+  M    V  + V+   +L  C+  G   E   F +
Sbjct: 615 IFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFK 674

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVV 304
           S    SR+             G    L     ++D+  + GD+  AE    ++P E   V
Sbjct: 675 S---MSRD------------YGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTV 719

Query: 305 SWNVMIA 311
            W+ ++ 
Sbjct: 720 IWSALLG 726



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 134/338 (39%), Gaps = 49/338 (14%)

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
           +D    S  I   ++  R   A  VF  +P  DI+ WNSMI+    + +  +A + F  +
Sbjct: 31  LDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAI 90

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
               +         +LS  A+L      R+V   + +   V      +A++  Y + GDI
Sbjct: 91  SGGNVRTATI----LLSGYARLGRVLDARRVFDGMPERNTV----AWNAMVSCYVQNGDI 142

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA----------------- 599
             AR+ FD M  ++  +WN M+ GY  +    +A  L+K M                   
Sbjct: 143 TMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIE 202

Query: 600 --------------SGVKPDDITFVAILTACSHSGLVDVGV-EIFNSMQLDHGVEPILDH 644
                          G  PD   F ++L+A   +GL D+GV E+   + L  G E  +  
Sbjct: 203 QHGKGWDIFRMMHHEGASPDQSNFASVLSAV--TGLQDLGVLEVLRPLVLKTGFESDVVI 260

Query: 645 YTCMIDCLGR-AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
            T +++   R A     A    D M  +++   W  ++++      +     AA  ++  
Sbjct: 261 GTSILNVYTRDASALDIAIKFFDGMVERNE-YTWSTMIAALSHGGRI----DAAIAVYGR 315

Query: 704 DPKNSAP-YSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           DP  S P  + L    +  GR  + R + E + +  +V
Sbjct: 316 DPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVV 353



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 16/148 (10%)

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           R VH  ++K  +       SA I    + G +  AR+ FD M  ++ + WN MI  Y  +
Sbjct: 25  RSVHRALDKSAH-------SARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNS 77

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G  ++A  L+  +    V+    T   +L+  +  G V     +F+ M   + V      
Sbjct: 78  GMLEDARILFDAISGGNVR----TATILLSGYARLGRVLDARRVFDGMPERNTVA----- 128

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           +  M+ C  + G    A  L D MP +D
Sbjct: 129 WNAMVSCYVQNGDITMARRLFDAMPSRD 156


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 242/772 (31%), Positives = 379/772 (49%), Gaps = 82/772 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA +L  G+     L +R++ +Y  C +     +LF                  C+   
Sbjct: 98  IHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLF------------------CR--- 136

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           L+  Y L           WN LI      G  + AL  + +M      P   T   V KA
Sbjct: 137 LQLCYSL----------PWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKA 186

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              L +V   +  H L   +G   ++++ ++L+ LY   G+   A  +F+E+   + + +
Sbjct: 187 CGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILW 246

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             M++G  K      AL  F+ M    V  +SVS   +L VCA  G  V +         
Sbjct: 247 NVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGI-VRA--------- 296

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G Q+H L I+ GFE+D  ++N+++ MY+K G++  A  IF  +P+   V+WN +
Sbjct: 297 ------GIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGL 350

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------- 360
           IAGY Q   + +A+ L + M + G + D +T  + L + ++SG +K  +E+         
Sbjct: 351 IAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGV 410

Query: 361 --------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                     F       V+   AM+S Y  +  + EA+ LFR 
Sbjct: 411 PFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRW 470

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +   G+ P+  T+A +L +CAA+  L+ GK++H   LK        V S +  +Y+K  R
Sbjct: 471 LIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGR 530

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            +LA + F R+P  D VCWN MI   S N     A   F+QM  +       S +  LS+
Sbjct: 531 LDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSA 590

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           CA   + + G+++H  + ++ +++D FV S LI+MY KCG +  AR  FDMM  KN V+W
Sbjct: 591 CANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSW 650

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I  Y  +G   E + L+ +M+ +G++PD +TF+ I++AC H+GLVD G+  F  M  
Sbjct: 651 NSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTE 710

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           ++G+   ++H+ CM+D  GRAG  HEA   I  MP   D   W  LL +CRLH NV LAK
Sbjct: 711 EYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAK 770

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            A++ L  LDP NS  Y LL+N+++  G W+ +  VR LM E  + K P YS
Sbjct: 771 LASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYS 822



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 167/653 (25%), Positives = 278/653 (42%), Gaps = 115/653 (17%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K++H      G   D F+ + LI+LY+     H A++LFD++P +D   WN +L+   K+
Sbjct: 197 KMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKN 256

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            D                                  AL  + +M N    P  ++   + 
Sbjct: 257 GDF-------------------------------NSALGTFQEMRNSCVKPNSVSFVCLL 285

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
                   V  G + HGLVI+ G + +  VAN ++++Y+KCG    A  +F+ M + + V
Sbjct: 286 SVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTV 345

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           T+  +++G  +     EA+ +F+ M+   V +DS++ +S L             V     
Sbjct: 346 TWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFL-----------PSVLKSGS 394

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
            K+ +     +VH   ++ G   D++L ++L+D+Y K GD++ A   F       V    
Sbjct: 395 LKYCK-----EVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCT 449

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------- 360
            MI+GY     + +A+ L + +   G  P+ +T  ++L AC     +K G+E+       
Sbjct: 450 AMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKK 509

Query: 361 ----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                       F  MP      WN M+ S+SQ+   + AI LF
Sbjct: 510 GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLF 569

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           R+M   G K D  +L+  LS+CA    L  GK++H   ++ +   D +VAS LI +YSKC
Sbjct: 570 RQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKC 629

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
            +  LA  VF  +   + V WNS+IA    +    E    F +M +  + P   +F  ++
Sbjct: 630 GKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIM 689

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           S+C            HA +  +G    I+    + E Y  C     AR    M H     
Sbjct: 690 SACG-----------HAGLVDEG----IYYFRCMTEEYGIC-----AR----MEH----- 720

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
            +  M+  Y + G   EA    K M  +   PD  T+ ++L AC   G V++ 
Sbjct: 721 -FACMVDLYGRAGRLHEAFDTIKSMPFT---PDAGTWGSLLGACRLHGNVELA 769



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 206/453 (45%), Gaps = 82/453 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG  LH  ++R+G   D  + N +I +YSKC N   A+ +FD MP  D  +WN       
Sbjct: 296 AGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNG------ 349

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    LI+  V+NG  ++A++++  M   G     IT AS
Sbjct: 350 -------------------------LIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFAS 384

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              +      +++ +  H  +++ G+  ++Y+ +AL+ +Y K G  + A   F++ +  +
Sbjct: 385 FLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVD 444

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
               TAM+SG       VEAL +FR +I++ +  + ++++SVL  CA           A 
Sbjct: 445 VAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACA-----------AL 493

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           +  K      G+++HC  +K G E    + +S+  MYAK+G +D A   F  +P +  V 
Sbjct: 494 ASLKL-----GKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVC 548

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           WN+MI  + Q  +   AI+L ++M + G + D V+    L AC                 
Sbjct: 549 WNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVV 608

Query: 350 -------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G +   R +FD M   +  SWN+++++Y      +E + 
Sbjct: 609 RNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLD 668

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           LF EM   G++PD  T  +I+S+C   G+++ G
Sbjct: 669 LFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEG 701



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 138/259 (53%), Gaps = 2/259 (0%)

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           +Q+HA  L    +    + S ++G+Y  C+  +    +F R+     + WN +I G S+ 
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
                A MFF +M  + + P +++F  V+ +C  L++    + VH      G+  D+F+G
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           S+LI++Y   G I+ A+  FD +  ++ + WN M++GY +NG  + A+  +++M  S VK
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           P+ ++FV +L+ C+  G+V  G+++ + + +  G E        +I    + G+  +A  
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQL-HGLVIRSGFESDPTVANTIITMYSKCGNLFDARK 334

Query: 664 LIDEMPCKDDPVIWEVLLS 682
           + D MP + D V W  L++
Sbjct: 335 IFDIMP-QTDTVTWNGLIA 352



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 120/293 (40%), Gaps = 46/293 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH  IL+ GL +   + + +  +Y+K      A   F +MP KD   WN        
Sbjct: 499 GKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNL------- 551

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I +  +NG  E A+ ++ +M   G     ++L++ 
Sbjct: 552 ------------------------MIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSAT 587

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      + +G+  H  V++     + +VA+ L+ +Y+KCG    A  VF+ M   NE
Sbjct: 588 LSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNE 647

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ ++++      R  E L++F  M+   +  D V+   ++  C   G  V+  ++   
Sbjct: 648 VSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGL-VDEGIY--- 703

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                         C+T + G  A +     ++D+Y + G +  A     ++P
Sbjct: 704 -----------YFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMP 745



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 4/161 (2%)

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
           Q RQ+HA++   G    + +GS ++ MY  C         F  +    ++ WN +I G++
Sbjct: 94  QVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFS 153

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV-EIFNSMQLDHGVEPI 641
             G  D A+  +  M+ S V PD  TF  ++ AC   GL +V + ++ + +    G    
Sbjct: 154 MLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKAC--GGLNNVPLCKMVHELARSMGFHMD 211

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           L   + +I      G+ H+A+ L DE+P + D ++W V+L+
Sbjct: 212 LFIGSSLIKLYTDNGYIHDAKYLFDELPVR-DCILWNVMLN 251


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/673 (34%), Positives = 353/673 (52%), Gaps = 57/673 (8%)

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M  EG       L  V K    + D + G + H + +  G   +++VANAL+++Y   G+
Sbjct: 1   MRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57

Query: 171 TKHAVPVFEEM-SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
              A  VF+E  SE N V++  +MS   K D+  +A+++F  M+   +       S V+ 
Sbjct: 58  MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
            C                   SRN+  G+QVH + +++G+E D+  +N+L+DMY K G +
Sbjct: 118 ACTG-----------------SRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRV 160

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
           D A VIF  +P+  VVSWN +I+G        +AIELL +MKS G  P+     ++L AC
Sbjct: 161 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 220

Query: 349 VRSGDIKTGREM-----------------------------------FDSMPSPSVSSWN 373
             +G    GR++                                   FD M    +  WN
Sbjct: 221 AGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWN 280

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           A++S  S    H EA  +F  ++  G+  +RTTLA +L S A++    + +QVHA + K 
Sbjct: 281 ALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKI 340

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               D +V +GLI  Y KC     A RVF      DI+   SMI  LS       A   F
Sbjct: 341 GFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLF 400

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
            +M +  + P  F  +++L++CA LS+  QG+QVHA + K  +++D F G+AL+  Y KC
Sbjct: 401 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC 460

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G I  A   F  +  +  V+W+ MI G AQ+G+G  A+ L+  M+  G+ P+ IT  ++L
Sbjct: 461 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 520

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
            AC+H+GLVD     FNSM+   G++   +HY+CMID LGRAG   +A  L++ MP + +
Sbjct: 521 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 580

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
             +W  LL + R+H +  L K AAE+LF L+P+ S  + LLAN Y+S G W+++  VR+L
Sbjct: 581 ASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKL 640

Query: 734 MSENCIVKDPAYS 746
           M ++ I K+PA S
Sbjct: 641 MKDSNIKKEPAMS 653



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 239/499 (47%), Gaps = 52/499 (10%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEM-PERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           D++  NA+++       ++ A ++FDE   ERN VSWN L+SA V+N     A+ V+ +M
Sbjct: 41  DVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM 100

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
              G  PT    + V  A T   +++ GR+ H +V+++G +K+++ ANAL+ +Y K G  
Sbjct: 101 VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRV 160

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A  +FE+M + + V++ A++SG         A+E+   M    +  +   LSS+L  C
Sbjct: 161 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 220

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A  G     D+             G+Q+H   IK   ++D ++   L+DMYAKN  +D A
Sbjct: 221 AGAGA---FDL-------------GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 264

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
             +F  +  R ++ WN +I+G     +  +A  +   ++  G   +  T   +L +    
Sbjct: 265 MKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASL 324

Query: 352 GDIKTGRE-----------------------------------MFDSMPSPSVSSWNAML 376
                 R+                                   +F+   S  + +  +M+
Sbjct: 325 EAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMI 384

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           ++ SQ ++ + AIKLF EM  +G++PD   L+ +L++CA++   E GKQVHA  +K    
Sbjct: 385 TALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM 444

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D +  + L+  Y+KC   E AE  F  +PE  +V W++MI GL+ +     A   F +M
Sbjct: 445 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 504

Query: 497 RQNEMYPTQFSFATVLSSC 515
               + P   +  +VL +C
Sbjct: 505 VDEGINPNHITMTSVLCAC 523



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 185/397 (46%), Gaps = 52/397 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +++     D ++   L+++Y+K +    A  +FD M H+D+  WNA       
Sbjct: 229 GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNA------- 281

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LIS     G  ++A S++  +  EG      TLA+V
Sbjct: 282 ------------------------LISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAV 317

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K++ +L      R+ H L  KIG   + +V N L+  Y KC     A+ VFEE S  + 
Sbjct: 318 LKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDI 377

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +  T+M++ L++ D    A+++F  M+RK +  D   LSS+L  CA              
Sbjct: 378 IAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACA-------------- 423

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S    G+QVH   IK  F +D    N+L+  YAK G ++ AE+ FS+LPER VVSW
Sbjct: 424 --SLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSW 481

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           + MI G  Q     +A+EL  RM   G  P+ +T  ++L AC  +G +   +  F+SM  
Sbjct: 482 SAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 541

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                 +   ++ M+    ++    +A++L   M F+
Sbjct: 542 MFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQ 578



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 187/409 (45%), Gaps = 51/409 (12%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           KD+++ NA++    K   ++ A  +F++MP+ +VVSWN LIS  V NG + +A+ +  +M
Sbjct: 142 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 201

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
            + G VP    L+S+ KA       + GR+ HG +IK   D + Y+   L+ +YAK  + 
Sbjct: 202 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 261

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A+ VF+ MS  + + + A++SG +   R  EA  +F  + ++ + ++  +L++VL   
Sbjct: 262 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVL--- 318

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
                        +S          +QVH L  K+GF  D H+ N L+D Y K   +  A
Sbjct: 319 -------------KSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDA 365

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--- 348
             +F       +++   MI    Q      AI+L   M   G EPD     ++L AC   
Sbjct: 366 IRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASL 425

Query: 349 --------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                            + G I+     F S+P   V SW+AM+
Sbjct: 426 SAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMI 485

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
              +Q  + K A++LF  M   G+ P+  T+  +L +C   G+++  K+
Sbjct: 486 GGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 534



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 137/311 (44%), Gaps = 47/311 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A  A + +HA   + G   D  + N LI+ Y KC+    A  +F++    DI +  +++
Sbjct: 325 EAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMI 384

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +A  + D  E A KLF EM               +R GLE                P   
Sbjct: 385 TALSQCDHGEGAIKLFMEM---------------LRKGLE----------------PDPF 413

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            L+S+  A  +L   E G++ H  +IK     + +  NAL+  YAKCG  + A   F  +
Sbjct: 414 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 473

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E   V+++AM+ GLA+      ALE+F  M+ + ++ + ++++SVL  C   G   E+ 
Sbjct: 474 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 533

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
            +  S  +                 G +      + ++D+  + G +D A  + +++P +
Sbjct: 534 RYFNSMKEM---------------FGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQ 578

Query: 302 SVVS-WNVMIA 311
           +  S W  ++ 
Sbjct: 579 ANASVWGALLG 589


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 248/778 (31%), Positives = 386/778 (49%), Gaps = 82/778 (10%)

Query: 7   GKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G  +H   +  GL   DT L  RL+ +Y        A  +F  +P           +A C
Sbjct: 58  GLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG---------AAAC 108

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITL 123
                               + WN LI  L   G    AL  Y KM       +P   T 
Sbjct: 109 -------------------ALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTF 149

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
             V K+  AL  +  GR  H     +GLD +++V +AL+ +YA  G    A  VF+ M+E
Sbjct: 150 PYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAE 209

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + V +  MM G  K   V  A+E+F  M       +  +L+  L V A      ESD+F
Sbjct: 210 RDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSA-----TESDLF 264

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G Q+H L +K G E+++ ++N+L+ MYAK   +D    +F  +P   +
Sbjct: 265 -----------FGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDL 313

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           V+WN MI+G  Q     +A+ L   M+  G  PD VT +++L A         G+E+   
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY 373

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           +DS  +  V   + M+S Y  +   +EA
Sbjct: 374 IVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEA 433

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           +K+FR +  +G++P+   +A +L +CA+M  ++ G+++H+ +LK A     YV S L+ +
Sbjct: 434 VKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDM 493

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+KC R +L+  +F +I   D V WNSMI+  + N    EA   F++M    +  +  + 
Sbjct: 494 YAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTI 553

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           ++VLS+CA L + + G+++H  + K     D+F  SALI+MY KCG++  A + F+ M  
Sbjct: 554 SSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPE 613

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           KN V+WN +I  Y   G   E+V L + M   G K D +TF+A+++AC+H+G V  G+ +
Sbjct: 614 KNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRL 673

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F  M  ++ + P ++H+ CM+D   RAG   +A  LI +MP K D  IW  LL +CR+H 
Sbjct: 674 FRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHR 733

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           NV LA+ A++ELF+LDP NS  Y L++NI +  GRWD +  VR LM +  + K P YS
Sbjct: 734 NVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYS 791



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 141/289 (48%), Gaps = 9/289 (3%)

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASH-IDNYVASGLIGIYSKCQRNELAER 460
           PDR  LA+ L  C +   L  G QVH  ++    H  D  + + L+G+Y   +R   A  
Sbjct: 38  PDRRLLAV-LRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96

Query: 461 VFHRIPELDIVC---WNSMIAGLSLNSLDIEAFMFFKQM--RQNEMYPTQFSFATVLSSC 515
           VF  +P     C   WN +I GL++      A +F+ +M    +   P   +F  V+ SC
Sbjct: 97  VFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSC 156

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           A L +   GR VH      G   D+FVGSALI+MY   G ++ ARQ FD M  ++ V WN
Sbjct: 157 AALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWN 216

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            M+ GY + G    AV L+ DM ASG +P+  T    L+  +    +  GV++ +++ + 
Sbjct: 217 VMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQL-HTLAVK 275

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           +G+E  +     ++    +     +   L   MP +DD V W  ++S C
Sbjct: 276 YGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP-RDDLVTWNGMISGC 323


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 245/786 (31%), Positives = 397/786 (50%), Gaps = 103/786 (13%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           ++H  I+ +GL  DT+L N L+ LYS+                                 
Sbjct: 65  VVHGQIIVSGLELDTYLSNILMNLYSRAGG------------------------------ 94

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY-NKMSNEGFVPTHITLASVF 127
            + +A K+F++MPERN+V+W+ ++SA   +G  E++L V+ +        P    L+S  
Sbjct: 95  -MVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFI 153

Query: 128 KASTALLDVEHGR----RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +A + L     GR    +    ++K   D+++YV   L+  Y K G   +A  VF+ + E
Sbjct: 154 QACSGLDG--SGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPE 211

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA----REGCGVE 239
            + VT+T M+SG  K  R   +L++F  ++   V  D   LS+VL  C+     EG    
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEG---- 267

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                           G+Q+H   ++ G E D  L N L+D Y K G + +A  +F  +P
Sbjct: 268 ----------------GKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMP 311

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------- 348
            ++++SW  +++GY Q     +A+EL   M   G +PD     ++L +C           
Sbjct: 312 NKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQ 371

Query: 349 VRSGDIKT------------------------GREMFDSMPSPSVSSWNAMLSSYS---- 380
           V +  IK                          R++FD   +  V  +NAM+  YS    
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGT 431

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           Q E H +A+ +F +M+FR ++P   T   +L + A++  L   KQ+H    K   ++D +
Sbjct: 432 QWELH-DALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIF 490

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
             S LI +YS C   + +  VF  +   D+V WNSM +G    S + EA   F +++ + 
Sbjct: 491 AGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSR 550

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
             P +F+F  ++++   L+S   G++ H Q+ K G   + ++ +AL++MY KCG    A 
Sbjct: 551 DRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           + FD    ++ V WN +I  YA +G G +A+++ + M+  G++P+ ITFV +L+ACSH+G
Sbjct: 611 KAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAG 670

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           LV+ G++ F  M L  G+EP  +HY CM+  LGRAG  +EA  LI++MP K   ++W  L
Sbjct: 671 LVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSL 729

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           LS C    NV LA+ AAE     DPK+S  ++LL+NIY+S G W D + VRE M    +V
Sbjct: 730 LSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVV 789

Query: 741 KDPAYS 746
           K+P  S
Sbjct: 790 KEPGRS 795



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 225/515 (43%), Gaps = 90/515 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +HAHILR G   D  L N LI+ Y KC    +A  LFD MP+K+I SW  +LS   
Sbjct: 267 GGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLS--- 323

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                   YK                     +N L ++A+ ++  M   G  P     +S
Sbjct: 324 -------GYK---------------------QNSLHKEAMELFTSMPKFGLKPDMFACSS 355

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  +  +L  +E G + H   IK  L  + YV N+L+ +YAKC     A  VF+  +  +
Sbjct: 356 ILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADD 415

Query: 186 EVTFTAMMSGLAKTDRVVE---ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
            V F AM+ G ++     E   AL +F  M  + +    ++  S+L   A          
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASA---------- 465

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
            + +    S+ +HG     L  K G   D+   ++L+ +Y+    +  + ++F  +  + 
Sbjct: 466 -SLTSLGLSKQIHG-----LMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKD 519

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-- 360
           +V WN M +GY Q+ ++ +A+ L   ++     PDE T ++M+ A      ++ G+E   
Sbjct: 520 LVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHC 579

Query: 361 ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                            FDS  S  V  WN+++SSY+     ++
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRK 639

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA--SHIDNYVASGL 445
           A+++  +M   G++P+  T   +LS+C+  G++E G +     L+       ++YV   +
Sbjct: 640 ALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVC--M 697

Query: 446 IGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           + +  +  R   A  +  ++P +   + W S+++G
Sbjct: 698 VSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSG 732


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 248/778 (31%), Positives = 386/778 (49%), Gaps = 82/778 (10%)

Query: 7   GKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G  +H   +  GL   DT L  RL+ +Y        A  +F  +P           +A C
Sbjct: 58  GLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG---------AAAC 108

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITL 123
                               + WN LI  L   G    AL  Y KM       +P   T 
Sbjct: 109 -------------------ALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTF 149

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
             V K+  AL  +  GR  H     +GLD +++V +AL+ +YA  G    A  VF+ M+E
Sbjct: 150 PYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAE 209

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + V +  MM G  K   V  A+E+F  M       +  +L+  L V A      ESD+F
Sbjct: 210 RDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSA-----TESDLF 264

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G Q+H L +K G E+++ ++N+L+ MYAK   +D    +F  +P   +
Sbjct: 265 -----------FGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDL 313

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           V+WN MI+G  Q     +A+ L   M+  G  PD VT +++L A         G+E+   
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY 373

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           +DS  +  V   + M+S Y  +   +EA
Sbjct: 374 IVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEA 433

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           +K+FR +  +G++P+   +A +L +CA+M  ++ G+++H+ +LK A     YV S L+ +
Sbjct: 434 VKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDM 493

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+KC R +L+  +F +I   D V WNSMI+  + N    EA   F++M    +  +  + 
Sbjct: 494 YAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTI 553

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           ++VLS+CA L + + G+++H  + K     D+F  SALI+MY KCG++  A + F+ M  
Sbjct: 554 SSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPE 613

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           KN V+WN +I  Y   G   E+V L + M   G K D +TF+A+++AC+H+G V  G+ +
Sbjct: 614 KNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRL 673

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F  M  ++ + P ++H+ CM+D   RAG   +A  LI +MP K D  IW  LL +CR+H 
Sbjct: 674 FRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHR 733

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           NV LA+ A++ELF+LDP NS  Y L++NI +  GRWD +  VR LM +  + K P YS
Sbjct: 734 NVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYS 791



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 141/289 (48%), Gaps = 9/289 (3%)

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASH-IDNYVASGLIGIYSKCQRNELAER 460
           PDR  LA+ L  C +   L  G QVH  ++    H  D  + + L+G+Y   +R   A  
Sbjct: 38  PDRRLLAV-LRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96

Query: 461 VFHRIPELDIVC---WNSMIAGLSLNSLDIEAFMFFKQM--RQNEMYPTQFSFATVLSSC 515
           VF  +P     C   WN +I GL++      A +F+ +M    +   P   +F  V+ SC
Sbjct: 97  VFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSC 156

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           A L +   GR VH      G   D+FVGSALI+MY   G ++ ARQ FD M  ++ V WN
Sbjct: 157 AALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWN 216

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            M+ GY + G    AV L+ DM ASG +P+  T    L+  +    +  GV++ +++ + 
Sbjct: 217 VMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQL-HTLAVK 275

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           +G+E  +     ++    +     +   L   MP +DD V W  ++S C
Sbjct: 276 YGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP-RDDLVTWNGMISGC 323


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 237/812 (29%), Positives = 395/812 (48%), Gaps = 150/812 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA ++ NG+    FL +RL+E+Y                               C+
Sbjct: 108 GFQVHAQLVVNGVDVCEFLGSRLLEVY-------------------------------CQ 136

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +  +E A ++FD+M ERNV SW  ++      G  E+ + ++  M NEG  P H     V
Sbjct: 137 TGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKV 196

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS---- 182
           FKA + L +   G+  +  ++ IG + N  V  ++L ++ KCG    A   FEE+     
Sbjct: 197 FKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDV 256

Query: 183 -------------------------------EPNEVTFTAMMSGLAKTDRV--------- 202
                                          +P++VT+ A++SG A++ +          
Sbjct: 257 FMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLE 316

Query: 203 ---------------------------VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
                                       EAL +FR M+ + V  +S++++S +  C    
Sbjct: 317 MGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACT--- 373

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKL-GFEADLHLSNSLLDMYAKNGDMDSAEVI 294
                          S   HG+++H   IK+   ++DL + NSL+D YAK   ++ A   
Sbjct: 374 -------------NLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRK 420

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  + +  +VSWN M+AGY  +    +AIELL  MK  G EPD +T              
Sbjct: 421 FGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIIT-------------- 466

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                            WN +++ ++Q  + K A++ F+ M   G+ P+ TT++  L++C
Sbjct: 467 -----------------WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAAC 509

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
             +  L+ GK++H   L+    +   V S LI +YS C   E+A  VF  +   D+V WN
Sbjct: 510 GQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWN 569

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           S+I+  + +   + A    ++M  + +     +  + L +C+KL++  QG+++H  I + 
Sbjct: 570 SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 629

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G     F+ ++LI+MY +CG I  +R+ FD+M  ++ V+WN MI  Y  +G+G +AV L+
Sbjct: 630 GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 689

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           +     G+KP+ ITF  +L+ACSHSGL++ G + F  M+ ++ ++P ++ Y CM+D L R
Sbjct: 690 QXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 749

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           AG F+E    I++MP + +  +W  LL +CR+H N  LA+ AA  LF L+P++S  Y L+
Sbjct: 750 AGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLM 809

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ANIYS+ GRW+D   +R LM E  + K P  S
Sbjct: 810 ANIYSAAGRWEDAAKIRCLMKERGVTKPPGCS 841



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 283/606 (46%), Gaps = 59/606 (9%)

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           AS+ +    L ++  G + H  ++  G+D   ++ + LL +Y + G  + A  +F++MSE
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N  ++TA+M          E +++F LM+ + V  D      V   C+           
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACS----------- 201

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                +      G+ V+   + +GFE +  +  S+LDM+ K G MD A   F  +  + V
Sbjct: 202 -----ELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDV 256

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
             WN+M++GY  K +  KA++ +  MK  G +PD+VT   ++    +SG  +   + F  
Sbjct: 257 FMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLE 316

Query: 364 MPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           M       P+V SW A+++   Q+    EA+ +FR+M   GVKP+  T+A  +S+C  + 
Sbjct: 317 MGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLS 376

Query: 419 ILESGKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
           +L  G+++H   +K      D  V + L+  Y+KC+  E+A R F  I + D+V WN+M+
Sbjct: 377 LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAML 436

Query: 478 AGLSLNSLDIE-----------------------------------AFMFFKQMRQNEMY 502
           AG +L     E                                   A  FF++M    M 
Sbjct: 437 AGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMD 496

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   + +  L++C ++ +   G+++H  + ++       VGSALI MY  C  +  A   
Sbjct: 497 PNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSV 556

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F  +  ++ V WN +I   AQ+G    A+ L ++M  S V+ + +T V+ L ACS    +
Sbjct: 557 FSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAAL 616

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
             G EI +   +  G++        +ID  GR G   ++  + D MP + D V W V++S
Sbjct: 617 RQGKEI-HQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMIS 674

Query: 683 SCRLHA 688
              +H 
Sbjct: 675 VYGMHG 680



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 149/575 (25%), Positives = 254/575 (44%), Gaps = 99/575 (17%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSW---- 57
           K +  GK ++ ++L  G   ++ +   +++++ KC     A+  F+++  KD++ W    
Sbjct: 204 KNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMV 263

Query: 58  -------------------------------NAILSAQCKSDDLEFAYKLFDEMP----- 81
                                          NAI+S   +S   E A K F EM      
Sbjct: 264 SGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDF 323

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
           + NVVSW  LI+   +NG + +ALSV+ KM  EG  P  IT+AS   A T L  + HGR 
Sbjct: 324 KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGRE 383

Query: 142 CHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
            HG  IK+  LD ++ V N+L+  YAKC   + A   F  + + + V++ AM++G A   
Sbjct: 384 IHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRG 443

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS--------- 251
              EA+E+   M  + +  D ++ + ++    + G G  +  F Q  +            
Sbjct: 444 SHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTIS 503

Query: 252 ---------RNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    RN+  G+++H   ++   E    + ++L+ MY+    ++ A  +FS L  R
Sbjct: 504 GALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTR 563

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------ 349
            VV WN +I+   Q  +S  A++LL+ M     E + VT ++ L AC             
Sbjct: 564 DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIH 623

Query: 350 -----------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  R G I+  R +FD MP   + SWN M+S Y       
Sbjct: 624 QFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGM 683

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SG 444
           +A+ LF+  +  G+KP+  T   +LS+C+  G++E G + +   +KT   +D  V   + 
Sbjct: 684 DAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWK-YFKMMKTEYAMDPAVEQYAC 742

Query: 445 LIGIYSKC-QRNELAERVFHRIPELDIVCWNSMIA 478
           ++ + S+  Q NE  E +     E +   W S++ 
Sbjct: 743 MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLG 777



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 157/354 (44%), Gaps = 44/354 (12%)

Query: 284 KNGDMDSAEVIFSNL----PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
           +NG +++A ++ S++    P+  +  +  ++    + Y      ++  ++   G +  E 
Sbjct: 66  RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125

Query: 340 TSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
               +L    ++G ++  R MFD M   +V SW A++  Y    +++E IKLF  M   G
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V+PD      +  +C+ +     GK V+   L      ++ V   ++ ++ KC R ++A 
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           R F  I   D+  WN M++G +      +A      M+ + + P Q ++           
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW----------- 294

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG-----KNTVTW 574
                                   +A+I  Y + G    A ++F  M G      N V+W
Sbjct: 295 ------------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
             +I G  QNGY  EA+ +++ M+  GVKP+ IT  + ++AC++  L+  G EI
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 384



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 2/175 (1%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +A++L  C KL +   G QVHAQ+  +G     F+GS L+E+YC+ G +  AR+ FD M 
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            +N  +W  ++  Y   G  +E ++L+  M+  GV+PD   F  +  ACS      VG +
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           +++ M L  G E        ++D   + G    A    +E+  K D  +W +++S
Sbjct: 212 VYDYM-LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVS 264


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 237/812 (29%), Positives = 395/812 (48%), Gaps = 150/812 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA ++ NG+    FL +RL+E+Y                               C+
Sbjct: 108 GFQVHAQLVVNGVDVCEFLGSRLLEVY-------------------------------CQ 136

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +  +E A ++FD+M ERNV SW  ++      G  E+ + ++  M NEG  P H     V
Sbjct: 137 TGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKV 196

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS---- 182
           FKA + L +   G+  +  ++ IG + N  V  ++L ++ KCG    A   FEE+     
Sbjct: 197 FKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDV 256

Query: 183 -------------------------------EPNEVTFTAMMSGLAKTDRV--------- 202
                                          +P++VT+ A++SG A++ +          
Sbjct: 257 FMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLE 316

Query: 203 ---------------------------VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
                                       EAL +FR M+ + V  +S++++S +  C    
Sbjct: 317 MGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACT--- 373

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKL-GFEADLHLSNSLLDMYAKNGDMDSAEVI 294
                          S   HG+++H   IK+   ++DL + NSL+D YAK   ++ A   
Sbjct: 374 -------------NLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRK 420

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  + +  +VSWN M+AGY  +    +AIELL  MK  G EPD +T              
Sbjct: 421 FGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIIT-------------- 466

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                            WN +++ ++Q  + K A++ F+ M   G+ P+ TT++  L++C
Sbjct: 467 -----------------WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAAC 509

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
             +  L+ GK++H   L+    +   V S LI +YS C   E+A  VF  +   D+V WN
Sbjct: 510 GQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWN 569

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           S+I+  + +   + A    ++M  + +     +  + L +C+KL++  QG+++H  I + 
Sbjct: 570 SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 629

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G     F+ ++LI+MY +CG I  +R+ FD+M  ++ V+WN MI  Y  +G+G +AV L+
Sbjct: 630 GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 689

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           +     G+KP+ ITF  +L+ACSHSGL++ G + F  M+ ++ ++P ++ Y CM+D L R
Sbjct: 690 QQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 749

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           AG F+E    I++MP + +  +W  LL +CR+H N  LA+ AA  LF L+P++S  Y L+
Sbjct: 750 AGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLM 809

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ANIYS+ GRW+D   +R LM E  + K P  S
Sbjct: 810 ANIYSAAGRWEDAAKIRCLMKERGVTKPPGCS 841



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 283/606 (46%), Gaps = 59/606 (9%)

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           AS+ +    L ++  G + H  ++  G+D   ++ + LL +Y + G  + A  +F++MSE
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N  ++TA+M          E +++F LM+ + V  D      V   C+           
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACS----------- 201

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                +      G+ V+   + +GFE +  +  S+LDM+ K G MD A   F  +  + V
Sbjct: 202 -----ELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDV 256

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
             WN+M++GY  K +  KA++ +  MK  G +PD+VT   ++    +SG  +   + F  
Sbjct: 257 FMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLE 316

Query: 364 MPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           M       P+V SW A+++   Q+    EA+ +FR+M   GVKP+  T+A  +S+C  + 
Sbjct: 317 MGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLS 376

Query: 419 ILESGKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
           +L  G+++H   +K      D  V + L+  Y+KC+  E+A R F  I + D+V WN+M+
Sbjct: 377 LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAML 436

Query: 478 AGLSLNSLDIE-----------------------------------AFMFFKQMRQNEMY 502
           AG +L     E                                   A  FF++M    M 
Sbjct: 437 AGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMD 496

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   + +  L++C ++ +   G+++H  + ++       VGSALI MY  C  +  A   
Sbjct: 497 PNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSV 556

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F  +  ++ V WN +I   AQ+G    A+ L ++M  S V+ + +T V+ L ACS    +
Sbjct: 557 FSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAAL 616

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
             G EI +   +  G++        +ID  GR G   ++  + D MP + D V W V++S
Sbjct: 617 RQGKEI-HQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMIS 674

Query: 683 SCRLHA 688
              +H 
Sbjct: 675 VYGMHG 680



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 149/575 (25%), Positives = 255/575 (44%), Gaps = 99/575 (17%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSW---- 57
           K +  GK ++ ++L  G   ++ +   +++++ KC     A+  F+++  KD++ W    
Sbjct: 204 KNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMV 263

Query: 58  -------------------------------NAILSAQCKSDDLEFAYKLFDEMP----- 81
                                          NAI+S   +S   E A K F EM      
Sbjct: 264 SGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDF 323

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
           + NVVSW  LI+   +NG + +ALSV+ KM  EG  P  IT+AS   A T L  + HGR 
Sbjct: 324 KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGRE 383

Query: 142 CHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
            HG  IK+  LD ++ V N+L+  YAKC   + A   F  + + + V++ AM++G A   
Sbjct: 384 IHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRG 443

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS--------- 251
              EA+E+   M  + +  D ++ + ++    + G G  +  F Q  +            
Sbjct: 444 SHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTIS 503

Query: 252 ---------RNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    RN+  G+++H   ++   E    + ++L+ MY+    ++ A  +FS L  R
Sbjct: 504 GALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTR 563

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------ 349
            VV WN +I+   Q  +S  A++LL+ M     E + VT ++ L AC             
Sbjct: 564 DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIH 623

Query: 350 -----------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  R G I+  R +FD MP   + SWN M+S Y       
Sbjct: 624 QFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGM 683

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SG 444
           +A+ LF++ +  G+KP+  T   +LS+C+  G++E G + +   +KT   +D  V   + 
Sbjct: 684 DAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWK-YFKMMKTEYAMDPAVEQYAC 742

Query: 445 LIGIYSKC-QRNELAERVFHRIPELDIVCWNSMIA 478
           ++ + S+  Q NE  E +     E +   W S++ 
Sbjct: 743 MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLG 777



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 157/354 (44%), Gaps = 44/354 (12%)

Query: 284 KNGDMDSAEVIFSNL----PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
           +NG +++A ++ S++    P+  +  +  ++    + Y      ++  ++   G +  E 
Sbjct: 66  RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125

Query: 340 TSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
               +L    ++G ++  R MFD M   +V SW A++  Y    +++E IKLF  M   G
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V+PD      +  +C+ +     GK V+   L      ++ V   ++ ++ KC R ++A 
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           R F  I   D+  WN M++G +      +A      M+ + + P Q ++           
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW----------- 294

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG-----KNTVTW 574
                                   +A+I  Y + G    A ++F  M G      N V+W
Sbjct: 295 ------------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
             +I G  QNGY  EA+ +++ M+  GVKP+ IT  + ++AC++  L+  G EI
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 384



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 2/175 (1%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +A++L  C KL +   G QVHAQ+  +G     F+GS L+E+YC+ G +  AR+ FD M 
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            +N  +W  ++  Y   G  +E ++L+  M+  GV+PD   F  +  ACS      VG +
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           +++ M L  G E        ++D   + G    A    +E+  K D  +W +++S
Sbjct: 212 VYDYM-LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVS 264


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/692 (32%), Positives = 373/692 (53%), Gaps = 55/692 (7%)

Query: 94  ALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLD 152
           A+ RN L   A+ ++ K+ ++  F   + T   V KA T  LD   G   HG+VIK+GL 
Sbjct: 4   AVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLL 63

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
            +++V NAL+++Y K G+   AV VF  M   N V++ +++SG ++     +  +M   M
Sbjct: 64  LDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEM 123

Query: 213 I--RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
           +   + +  D  +L +VL VCARE      DV             G ++H L +KLG   
Sbjct: 124 MAGEEGLLPDIATLVTVLPVCARE-----VDV-----------QMGIRIHGLAVKLGLSE 167

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           D+ ++NSL+DMY+K G +  A+++F     ++ VSWN MI G   K    +A  L + M+
Sbjct: 168 DVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQ 227

Query: 331 -SCGFEPDEVTSINMLVACVRSGDIKTGREM----------------------------- 360
                E +EVT +N+L AC+    +++ +E+                             
Sbjct: 228 MQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGML 287

Query: 361 ------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                 F SM + +V+SWNA++   +Q+ + ++A+ L+ +M + G+ PD  T+  +L + 
Sbjct: 288 ICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLAS 347

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           A +  L  GK+VH   L+    ID+++   L+ +Y  C  +  A  +F  + E   V WN
Sbjct: 348 AHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWN 407

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           +MI+G S N L  +A + F+++  +   P+  +  +VL +C++ S+   G++ H    K 
Sbjct: 408 AMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKA 467

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
             + D+FV  + I+MY K G I  +R  FD +  K+  +WN +I  Y  +G G+E++ L+
Sbjct: 468 LLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELF 527

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           + M   G  PD  TF+ ILT CSH+GLV+ G++ FN MQ  HG+EP L+HY C++D LGR
Sbjct: 528 ERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGR 587

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           AG   +A  L+ EMP + D  +W  LLS CR    + + +  AE+L  L+PKN   Y  L
Sbjct: 588 AGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSL 647

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +N+Y+  GRWDD+R VR+++ +  + KD   S
Sbjct: 648 SNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCS 679



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 170/662 (25%), Positives = 298/662 (45%), Gaps = 128/662 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H  +++ GL  D F+ N LI +Y K     +A                        
Sbjct: 50  GEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAA------------------------ 85

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITLA 124
                   K+F  MP RN+VSWN++IS    NG  +    +  +M    EG +P   TL 
Sbjct: 86  -------VKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLV 138

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +V       +DV+ G R HGL +K+GL +++ V N+L+ +Y+KCG+   A  +F++ +  
Sbjct: 139 TVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRK 198

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
           N V++  M+ GL     + EA  +FR M +++ + ++ V++ ++L  C            
Sbjct: 199 NAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACL----------- 247

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                + S+    +++H  +I+ GF+ D  ++N  +  YAK G +  AE +F ++  ++V
Sbjct: 248 -----EISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTV 302

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT----------------------- 340
            SWN +I G  Q     KA+ L  +M   G  PD  T                       
Sbjct: 303 NSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGF 362

Query: 341 ------------SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                        I++L   +  G+  + R +FD M   S  SWNAM+S YSQ+   ++A
Sbjct: 363 VLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDA 422

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           + LFR++   G +P    +  +L +C+    L  GK+ H  +LK     D +VA   I +
Sbjct: 423 LILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDM 482

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+K    + +  VF  +   D+  WN++IA   ++    E+   F++MR+    P  F+F
Sbjct: 483 YAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTF 542

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDG--YVNDI--FVG-SALIEMYCKCGDIYGARQFF 563
             +L+ C+           HA + ++G  Y N++  F G    +E Y    D+ G     
Sbjct: 543 IGILTVCS-----------HAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLG----- 586

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
                              + G  D+A+RL  +M     +PD   + ++L+ C + G ++
Sbjct: 587 -------------------RAGRLDDALRLVHEMPE---QPDSRVWSSLLSFCRNFGELE 624

Query: 624 VG 625
           +G
Sbjct: 625 IG 626



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 225/469 (47%), Gaps = 58/469 (12%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LH + +R+G   D  + N  +  Y+KC     A+ +F        YS           
Sbjct: 256 KELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVF--------YS----------- 296

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                       M  + V SWN LI    +NG   KAL++Y +M+  G VP   T+ S+ 
Sbjct: 297 ------------METKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLL 344

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            AS  L  + +G+  HG V++ GL+ + ++  +LLSLY  CG +  A  +F+ M E + V
Sbjct: 345 LASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSV 404

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++ AM+SG ++     +AL +FR ++        +++ SVLG C++           QS 
Sbjct: 405 SWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQ-----------QSA 453

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
            +      G++ HC  +K     D+ ++ S +DMYAK+G +  +  +F  L  + + SWN
Sbjct: 454 LRL-----GKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWN 508

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS- 366
            +IA YG      ++IEL +RM+  G  PD  T I +L  C  +G ++ G + F+ M + 
Sbjct: 509 AIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNF 568

Query: 367 ----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
               P +  +  ++    ++    +A++L  EM     +PD    + +LS C   G LE 
Sbjct: 569 HGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMP---EQPDSRVWSSLLSFCRNFGELEI 625

Query: 423 GKQVHAASLK-TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           G+ V    L+    +++NYV+  L  +Y+   R +   RV   I ++ +
Sbjct: 626 GQIVAEKLLELEPKNVENYVS--LSNLYAGSGRWDDVRRVRQMIKDIGL 672


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 237/714 (33%), Positives = 369/714 (51%), Gaps = 56/714 (7%)

Query: 73  AYKLFDEMPER---NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI--TLASVF 127
           A  +F  +P     + + WN LI      G    A+  Y KM      P+    TL  V 
Sbjct: 89  AVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVV 148

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K+  AL  V  GR  H      GL  ++YV +AL+ +Y+  G  + A   F+ M   + V
Sbjct: 149 KSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCV 208

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            +  MM G  K   V  A+ +FR M       +  +L+  L VCA      E+D+ +   
Sbjct: 209 LWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCA-----AEADLLS--- 260

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G Q+H L +K G E ++ ++N+LL MYAK   +D A  +F  LP   +V+WN
Sbjct: 261 --------GVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWN 312

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-------------------- 347
            MI+G  Q     +A+ L   M   G  PD VT +++L A                    
Sbjct: 313 GMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRN 372

Query: 348 CV---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
           CV               +  D++T R ++D+  +  V   + ++S Y  +   ++A+++F
Sbjct: 373 CVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMF 432

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           R +  + +KP+  T+A +L +CA++  L  G+++H   L+ A     YV S L+ +Y+KC
Sbjct: 433 RYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKC 492

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
            R +L+  +F ++   D V WNSMI+  S N    EA   F+QM    +     + ++ L
Sbjct: 493 GRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSAL 552

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           S+CA L + + G+++H  I K     DIF  SALI+MY KCG++  A + F+ M  KN V
Sbjct: 553 SACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEV 612

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +WN +I  Y  +G   E+V     M   G KPD +TF+A+++AC+H+GLV+ G+++F  M
Sbjct: 613 SWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCM 672

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
             ++ + P ++H+ CM+D   R+G   +A   I +MP K D  IW  LL +CR+H NV L
Sbjct: 673 TKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVEL 732

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A  A++ELF+LDP NS  Y L++NI +  GRWD +  VR LM +N I+K P YS
Sbjct: 733 ADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYS 786



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 156/565 (27%), Positives = 265/565 (46%), Gaps = 53/565 (9%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y  +A++     +  L  A   FD MP R+ V WN ++   ++ G    A+ ++  M 
Sbjct: 175 DVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMR 234

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             G  P   TLA       A  D+  G + H L +K GL++ + VAN LLS+YAKC    
Sbjct: 235 VSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLD 294

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +FE +   + VT+  M+SG  +   + EAL +F  M+R     DSV+L S+L    
Sbjct: 295 DAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLP--- 351

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                      A +D    +   G++VH   I+     D  L ++L+D+Y K  D+ +A 
Sbjct: 352 -----------ALTDLNGLK--QGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTAR 398

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            ++       VV  + +I+GY     S KA+++ + +     +P+ VT  ++L AC    
Sbjct: 399 NLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASIS 458

Query: 353 DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
            +  G+E+                                   F  M      +WN+M+S
Sbjct: 459 ALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMIS 518

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
           S+SQ+   +EA+ LFR+M   G+K +  T++  LS+CA++  +  GK++H   +K     
Sbjct: 519 SFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKA 578

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D +  S LI +Y+KC   ELA RVF  +P+ + V WNS+I+    + L  E+  F  +M+
Sbjct: 579 DIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQ 638

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDI 556
           +    P   +F  ++S+CA      +G Q+   + K+  +       A ++++Y + G +
Sbjct: 639 EEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRL 698

Query: 557 YGARQFF-DMMHGKNTVTWNEMIHG 580
             A QF  DM    +   W  ++H 
Sbjct: 699 DKAIQFIADMPFKPDAGIWGALLHA 723



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 235/512 (45%), Gaps = 88/512 (17%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           ++G  LH+  ++ GL  +  + N L+ +Y+KC     A  LF+ +P  D+ +WN      
Sbjct: 259 LSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNG----- 313

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +IS  V+NGL ++AL ++  M   G  P  +TL 
Sbjct: 314 --------------------------MISGCVQNGLLDEALGLFCDMLRSGARPDSVTLV 347

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  A T L  ++ G+  HG +I+  +  + ++ +AL+ +Y KC   + A  +++     
Sbjct: 348 SLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAI 407

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V  + ++SG        +AL+MFR ++ + +  ++V+++SVL  CA            
Sbjct: 408 DVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACA------------ 455

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 S    GQ++H   ++  +E   ++ ++L+DMYAK G +D +  IFS +  +  V
Sbjct: 456 ----SISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEV 511

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           +WN MI+ + Q  +  +A++L ++M   G + + VT  + L AC     I  G+E+    
Sbjct: 512 TWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVI 571

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          F+ MP  +  SWN+++S+Y      KE++
Sbjct: 572 IKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESV 631

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK---TASHIDNYVASGLI 446
                MQ  G KPD  T   ++S+CA  G++E G Q+     K    A  ++++    ++
Sbjct: 632 SFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFAC--MV 689

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMI 477
            +YS+  R + A +    +P + D   W +++
Sbjct: 690 DLYSRSGRLDKAIQFIADMPFKPDAGIWGALL 721



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 407 LAIILSSCAAMGILESGKQVHA-ASLKTASHIDNYVA--SGLIGIYSKCQRNELAERVFH 463
           L  +L  C +   L  G Q+HA A +  A    N++A  + L+G+Y   +R   A  VF 
Sbjct: 35  LLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 464 RIPELDI---VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ--FSFATVLSSCAKL 518
            +P       + WN +I G +       A +F+ +M  +   P+    +   V+ SCA L
Sbjct: 95  ALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAAL 154

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
            +   GR VH      G  +D++VGSALI+MY   G +  AR  FD M  ++ V WN M+
Sbjct: 155 GAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMM 214

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GY + G    AVRL+++M  SG +P+  T    L+ C+    +  GV++ +S+ +  G+
Sbjct: 215 DGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQL-HSLAVKCGL 273

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           E  +     ++    +     +A  L + +P +DD V W  ++S C
Sbjct: 274 EQEVAVANTLLSMYAKCRCLDDAWRLFELLP-RDDLVTWNGMISGC 318


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 242/775 (31%), Positives = 383/775 (49%), Gaps = 82/775 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  HA +L NG+  +  L  +L+ +Y  C     A+++F                    
Sbjct: 65  GRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIF-------------------- 104

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                +  +L+   P      WN +I      G  + AL  Y KM   G +P   T   V
Sbjct: 105 -----YQLRLWCSEP------WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYV 153

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L  V  GR  H  +  +G + +++V ++L+  Y++ G    A  +F+ M   + 
Sbjct: 154 IKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDG 213

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +  M++G  K      A  +F  M R   + +SV+ + VL VCA       S++    
Sbjct: 214 VLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA-------SEIMIN- 265

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q+H L +  G E D  ++N+LL MYAK G +  A  +F  +P+  +V+W
Sbjct: 266 --------FGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTW 317

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML--------------VAC--VR 350
           N MI+GY Q     +A  L   M S   +PD +T  + L              + C  +R
Sbjct: 318 NGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIR 377

Query: 351 SG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
           +G                   D++  R++FD      +    AM+S Y  +  +  A+++
Sbjct: 378 NGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEI 437

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           FR +    ++ +  TLA +L +CA +  L  GK++H   LK       YV S ++ +Y+K
Sbjct: 438 FRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAK 497

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C R +LA + F  I + D VCWNSMI   S N    EA   F+QM          S +  
Sbjct: 498 CGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAA 557

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS+CA L +   G+++HA + +  + +D+F  SALI+MY KCG++  A + FD M  KN 
Sbjct: 558 LSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNE 617

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           V+WN +I  Y  +G   +++ L+  M+  G++PD +TF+AI++AC H+G VD G+  F  
Sbjct: 618 VSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRC 677

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M  + G+   ++HY CM+D  GRAG  +EA  +I+ MP   D  +W  LL +CRLH NV 
Sbjct: 678 MTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVE 737

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LA+ A+  LF LDP+NS  Y LL+N++++ G+W+ +  +R LM E  + K P  S
Sbjct: 738 LAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCS 792



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 164/608 (26%), Positives = 276/608 (45%), Gaps = 61/608 (10%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM- 181
           L S+ +  T    +  GR+ H  ++  G+  N  +   LL +Y  CG    A  +F ++ 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 182 ---SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
              SEP    +  M+ G     +   AL  +  M+      D  +   V+  C     G+
Sbjct: 109 LWCSEP----WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACG----GL 160

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
            S               G+ VH     +GFE D+ + +SL+  Y++NG +  A  +F  +
Sbjct: 161 NSVAL------------GRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------- 348
           P +  V WNVM+ GY +      A  +   M+     P+ VT   +L  C          
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268

Query: 349 -------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                     + G +   R +FD MP   + +WN M+S Y Q+ 
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNG 328

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
              EA  LF EM    +KPD  T +  L   +    L  GK++H   ++    +D ++ S
Sbjct: 329 FMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKS 388

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            LI IY KC+  E+A ++F +   +DIV   +MI+G  LN ++  A   F+ + Q  M  
Sbjct: 389 ALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRA 448

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              + A+VL +CA L++   G+++H  I K+G+    +VGSA+++MY KCG +  A Q F
Sbjct: 449 NSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTF 508

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
             +  K+ V WN MI   +QNG  +EA+ L++ M  +G K D ++  A L+AC++   + 
Sbjct: 509 IGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALH 568

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G EI ++  +       L   + +ID   + G+   A  + D M  K++ V W  ++++
Sbjct: 569 YGKEI-HAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNE-VSWNSIIAA 626

Query: 684 CRLHANVR 691
              H  ++
Sbjct: 627 YGNHGRLK 634



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 154/309 (49%), Gaps = 4/309 (1%)

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTT--LAIILSSCAAMGILESGKQVHAASLKTA 434
           +++     H  ++ + + +QF     D     L  IL +C     L  G+Q HA  L   
Sbjct: 17  TTFKLKSFHTNSVNIGKPLQFSIHNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNG 76

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              +  + + L+G+Y  C     A+ +F+++       WN MI G ++      A +F+ 
Sbjct: 77  IGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYF 136

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           +M      P +++F  V+ +C  L+S   GR VH +I+  G+  D+FVGS+LI+ Y + G
Sbjct: 137 KMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENG 196

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
            I+ AR  FD M  K+ V WN M++GY +NG  D A  ++ +M  +   P+ +TF  +L+
Sbjct: 197 CIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLS 256

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
            C+   +++ G ++ + + +  G+E        ++    + GH  +A  L D MP K D 
Sbjct: 257 VCASEIMINFGSQL-HGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMP-KTDL 314

Query: 675 VIWEVLLSS 683
           V W  ++S 
Sbjct: 315 VTWNGMISG 323


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/740 (31%), Positives = 378/740 (51%), Gaps = 73/740 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA+++   +   +E A ++FD M  R+ +SWN++I     NG    A+ +++KM ++G  
Sbjct: 243 NALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTE 302

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGL----------DKNIYVANALLSLYAK 167
            + +T+ SV  A   L     G+  HG  +K GL            +  + + L+ +Y K
Sbjct: 303 ISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVK 362

Query: 168 CGWTKHAVPVFEEMSEPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS 226
           CG    A  VF+ MS    V  +  +M G AK     E+L +F  M    ++ D  ++S 
Sbjct: 363 CGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISC 422

Query: 227 VLGV-----CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDM 281
           +L       CAR+G                        H   +KLGF A   + N+L+  
Sbjct: 423 LLKCITCLSCARDGL---------------------VAHGYIVKLGFGAQCAVCNALISF 461

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           YAK+  +  A ++F+ +P +  +SWN +I+G      +++AIEL  RM + G E D VT 
Sbjct: 462 YAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTL 521

Query: 342 INMLVACVRSG-----------DIKTG------------------------REMFDSMPS 366
           +++L AC +S             +KTG                         ++F SM  
Sbjct: 522 LSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQ 581

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
            +V SW AM++SY ++    +   L +EM   G++PD   +   L + A    L+ GK V
Sbjct: 582 KNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSV 641

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H  +++        VA+ L+ +Y KC+  E A  +F R+   D++ WN++I G S N+  
Sbjct: 642 HGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFP 701

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
            E+F  F  M   +  P   +   +L + A +SS  +GR++HA   + G++ D +  +AL
Sbjct: 702 NESFSLFSDMLL-QFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNAL 760

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           ++MY KCG +  AR  FD +  KN ++W  MI GY  +G+G  A+ L++ M  SG++PD 
Sbjct: 761 VDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDA 820

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
            +F AIL AC HSGL   G   F +MQ ++ +EP L HYTC++D L R G   EA   I+
Sbjct: 821 ASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIE 880

Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDD 726
            MP + D  IW  LL  CR+H NV+LA++ A+++F+L+P+N+  Y LLANIY+   RW+ 
Sbjct: 881 SMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEA 940

Query: 727 LRAVRELMSENCIVKDPAYS 746
           ++ ++  +    + ++  YS
Sbjct: 941 VKKLKNKIGGRGLRENTGYS 960



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 183/673 (27%), Positives = 324/673 (48%), Gaps = 65/673 (9%)

Query: 63  AQCKSDDLEFAYKLFDEMPER--NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           A  K  DL  A  +FD MP +  +V  W +L+SA  + G  ++A+S++ +M   G  P  
Sbjct: 145 AYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDA 204

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
             ++ V K  ++L  +  G   HGL+ K+GL +   VANAL+++Y++CG  + A  VF+ 
Sbjct: 205 HAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDS 264

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M   + +++ +M+ G         A+++F  M  +   I SV++ SVL  CA  G G+  
Sbjct: 265 MHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGL-- 322

Query: 241 DVFAQSDNKFSRNVHGQQVHCL------TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
                      + VHG  V         +++ G + D  L + L+ MY K GDM SA  +
Sbjct: 323 ---------IGKAVHGYSVKSGLLWGLDSVQSGID-DAALGSKLVFMYVKCGDMASARRV 372

Query: 295 FSNLPERSVVS-WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---- 349
           F  +  +  V  WN+++ GY +  +  +++ L  +M   G  PDE  +I+ L+ C+    
Sbjct: 373 FDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDE-HAISCLLKCITCLS 431

Query: 350 --RSGDIKTGR------------------------------EMFDSMPSPSVSSWNAMLS 377
             R G +  G                                +F+ MP     SWN+++S
Sbjct: 432 CARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVIS 491

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
             S +  + EAI+LF  M  +G + D  TL  +L +CA      +G+ VH  S+KT    
Sbjct: 492 GCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIG 551

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           +  +A+ L+ +YS C   +   ++F  + + ++V W +MI       L  +     ++M 
Sbjct: 552 ETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMV 611

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
            + + P  F+  + L + A   S  QG+ VH    ++G    + V +AL+EMY KC ++ 
Sbjct: 612 LDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVE 671

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            AR  FD +  K+ ++WN +I GY++N + +E+  L+ DM+    +P+ +T   IL A +
Sbjct: 672 EARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAA 730

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYT--CMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
               ++ G EI ++  L  G   + D Y    ++D   + G    A +L D +  K + +
Sbjct: 731 SISSLERGREI-HAYALRRGF--LEDSYASNALVDMYVKCGALLVARVLFDRLT-KKNLI 786

Query: 676 IWEVLLSSCRLHA 688
            W ++++   +H 
Sbjct: 787 SWTIMIAGYGMHG 799



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/598 (26%), Positives = 258/598 (43%), Gaps = 70/598 (11%)

Query: 136 VEHGRRCHGLV----IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM--SEPNEVTF 189
           +E  +R H L+          K   +   L+  Y KCG    A  VF+ M     +   +
Sbjct: 113 LEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVW 172

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           T++MS  AK     EA+ +FR M    VS D+ ++S VL   +  G   E          
Sbjct: 173 TSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTE---------- 222

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+ +H L  KLG      ++N+L+ +Y++ G M+ A  +F ++  R  +SWN M
Sbjct: 223 ------GEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSM 276

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------- 348
           I G         A++L  +M S G E   VT +++L AC                     
Sbjct: 277 IGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGL 336

Query: 349 ------------------------VRSGDIKTGREMFDSMPSP-SVSSWNAMLSSYSQSE 383
                                   V+ GD+ + R +FD+M S  +V  WN ++  Y++  
Sbjct: 337 LWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVG 396

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
             +E++ LF +M   G+ PD   ++ +L     +     G   H   +K        V +
Sbjct: 397 EFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCN 456

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            LI  Y+K      A  VF+R+P  D + WNS+I+G S N L+ EA   F +M       
Sbjct: 457 ALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQEL 516

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              +  +VL +CA+    F GR VH    K G + +  + +AL++MY  C D     Q F
Sbjct: 517 DSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIF 576

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
             M  KN V+W  MI  Y + G  D+   L ++M+  G++PD     + L A +    + 
Sbjct: 577 RSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLK 636

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            G  + +   + +G+E +L     +++   +  +  EA ++ D +  K D + W  L+
Sbjct: 637 QGKSV-HGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNK-DVISWNTLI 692



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 218/465 (46%), Gaps = 57/465 (12%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+++H + ++ GL  +T L N L+++YS C++  S   +F  M  K++ SW A      
Sbjct: 536 AGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTA------ 589

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    +I++ +R GL +K   +  +M  +G  P    + S
Sbjct: 590 -------------------------MITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTS 624

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A      ++ G+  HG  I+ G++K + VANAL+ +Y KC   + A  +F+ ++  +
Sbjct: 625 ALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKD 684

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++  ++ G ++ +   E+  +F  M+ +    ++V+++ +L   A             
Sbjct: 685 VISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAA------------- 730

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                S    G+++H   ++ GF  D + SN+L+DMY K G +  A V+F  L +++++S
Sbjct: 731 ---SISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLIS 787

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W +MIAGYG       AI L ++M+  G EPD  +   +L AC  SG    GR  F +M 
Sbjct: 788 WTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQ 847

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P +  +  ++   S++ + KEA++    M    ++PD +    +L  C     +
Sbjct: 848 KEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMP---IEPDSSIWVSLLHGCRIHKNV 904

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           +  ++V     K       Y    L  IY++ +R E  +++ ++I
Sbjct: 905 KLAEKVADKVFKLEPENTGYYVL-LANIYAEAERWEAVKKLKNKI 948



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 196/461 (42%), Gaps = 83/461 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G + H +I++ G      +CN LI  Y+K N    A  +F++MP +D  SWN+++S  C 
Sbjct: 436 GLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISG-CS 494

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S                              NGL  +A+ ++ +M  +G     +TL SV
Sbjct: 495 S------------------------------NGLNSEAIELFIRMWTQGQELDSVTLLSV 524

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A         GR  HG  +K GL     +ANALL +Y+ C   +    +F  M + N 
Sbjct: 525 LPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNV 584

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM++   +     +   + + M+   +  D  +++S L              FA  
Sbjct: 585 VSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSAL------------HAFAGD 632

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           ++       G+ VH  TI+ G E  L ++N+L++MY K  +++ A +IF  +  + V+SW
Sbjct: 633 ESL----KQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISW 688

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------- 359
           N +I GY +     ++  L   M    F P+ VT   +L A      ++ GRE       
Sbjct: 689 NTLIGGYSRNNFPNESFSLFSDML-LQFRPNAVTMTCILPAAASISSLERGREIHAYALR 747

Query: 360 ----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +FD +   ++ SW  M++ Y      K AI L
Sbjct: 748 RGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIAL 807

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           F +M+  G++PD  + + IL +C   G+   G++   A  K
Sbjct: 808 FEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQK 848



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 8/184 (4%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYV----NDIFVGSALIEMYCKCGDIYGARQF 562
           S+  V+  C +  S    ++ HA I              +G  L+  Y KCGD+  AR  
Sbjct: 99  SYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTV 158

Query: 563 FDMM--HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           FD M     +   W  ++  YA+ G   EAV L++ M   GV PD      +L   S  G
Sbjct: 159 FDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLG 218

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
            +  G E+ + +    G+         +I    R G   +A  + D M  + D + W  +
Sbjct: 219 SLTEG-EVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPR-DAISWNSM 276

Query: 681 LSSC 684
           +  C
Sbjct: 277 IGGC 280


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/723 (30%), Positives = 357/723 (49%), Gaps = 87/723 (12%)

Query: 95  LVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKN 154
           L + G   +A+ +   +   G +    T   V +        E G+  H  + ++G++ +
Sbjct: 31  LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEID 90

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
           IY+ N+L++ Y+K      A  VF  M+  + VT+++M++  A  +   +A + F  M  
Sbjct: 91  IYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
             +  + ++  S+L  C                N +S    G+++H +   +G E D+ +
Sbjct: 151 ANIEPNRITFLSILKAC----------------NNYSILEKGRKIHTIVKAMGMETDVAV 194

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
           + +L+ MY+K G++  A  +F  + ER+VVSW  +I    Q  +  +A EL ++M   G 
Sbjct: 195 ATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGI 254

Query: 335 EPDEVTSINMLVAC-----------------------------------VRSGDIKTGRE 359
            P+ VT +++L +C                                    +   ++  RE
Sbjct: 255 SPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEARE 314

Query: 360 MFDSMPSPSVSSWNAMLSSYSQS-----ENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +FD M    V SW+AM++ Y+QS     E+  E  +L   M+  GV P++ T   IL +C
Sbjct: 315 IFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRAC 374

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC--------------QRNELA-- 458
            A G LE G+Q+HA   K    +D  + + +  +Y+KC               +N +A  
Sbjct: 375 TAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWT 434

Query: 459 ---------------ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
                          E+VF  +P  ++V WN MIAG + N   ++ F     M+     P
Sbjct: 435 SFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQP 494

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            + +  T+L +C  L+   +G+ VHA+  K G  +D  V ++LI MY KCG +  AR  F
Sbjct: 495 DRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVF 554

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D M  ++TV WN M+ GY Q+G G EAV L+K M+   V P++IT  A+++ACS +GLV 
Sbjct: 555 DKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQ 614

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G EIF  MQ D  + P   HY CM+D LGRAG   EAE  I  MPC+ D  +W  LL +
Sbjct: 615 EGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGA 674

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           C+ H NV+LA+RAA  +  L+P  ++ Y  L+NIY+  GRWDD   VR +M +  + KD 
Sbjct: 675 CKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDR 734

Query: 744 AYS 746
             S
Sbjct: 735 GES 737



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 164/599 (27%), Positives = 284/599 (47%), Gaps = 118/599 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H  +   G+  D +L N LI  YSK  +  SA+ +F +M  +D+ +W++++     
Sbjct: 75  GKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMI----- 129

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                     +A   N    KA   + +M++    P  IT  S+
Sbjct: 130 --------------------------AAYAGNNHPAKAFDTFERMTDANIEPNRITFLSI 163

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA      +E GR+ H +V  +G++ ++ VA AL+++Y+KCG    A  VF +M+E N 
Sbjct: 164 LKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNV 223

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TA++   A+  ++ EA E++  M++  +S ++V+  S+L  C              +
Sbjct: 224 VSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSC-------------NT 270

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +R   G+++H    + G E D+ ++N+L+ MY K   +  A  IF  + +R V+SW
Sbjct: 271 PEALNR---GRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISW 327

Query: 307 NVMIAGYGQK-YQSTKAI----ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
           + MIAGY Q  Y+  ++I    +LL+RM+  G  P++VT +++L AC   G ++ GR++ 
Sbjct: 328 SAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIH 387

Query: 361 ----------------------------------FDSMPSPSVSSWNAMLSSYSQSENHK 386
                                             F  M + +V +W + LS Y +  +  
Sbjct: 388 AELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLS 447

Query: 387 EAIKLFREMQFR-------------------------------GVKPDRTTLAIILSSCA 415
            A K+F EM  R                               G +PDR T+  IL +C 
Sbjct: 448 SAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACG 507

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
           A+  LE GK VHA ++K     D  VA+ LIG+YSKC +   A  VF ++   D V WN+
Sbjct: 508 ALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNA 567

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           M+AG   +   +EA   FK+M +  + P + +   V+S+C++     +GR++   +++D
Sbjct: 568 MLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQED 626



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 240/548 (43%), Gaps = 124/548 (22%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +   G+  D  +   LI +YSKC     A  +F KM  +++ SW AI+ A  +
Sbjct: 176 GRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQ 235

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L  A++L+++M +                                G  P  +T  S+
Sbjct: 236 HRKLNEAFELYEQMLQ-------------------------------AGISPNAVTFVSL 264

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             +      +  GRR H  + + GL+ ++ VANAL+++Y KC   + A  +F+ MS+ + 
Sbjct: 265 LNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDV 324

Query: 187 VTFTAMMSGLAKT-----DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           ++++AM++G A++     + + E  ++   M R+ V  + V+  S+L  C   G  +E  
Sbjct: 325 ISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHG-ALE-- 381

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA------------------ 283
                         G+Q+H    K+GFE D  L  ++ +MYA                  
Sbjct: 382 -------------QGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANK 428

Query: 284 -------------KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
                        K GD+ SAE +FS +P R+VVSWN+MIAGY Q     K  ELL  MK
Sbjct: 429 NVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK 488

Query: 331 SCGFEPDEVTSINMLVAC-----------------------------------VRSGDIK 355
           + GF+PD VT I +L AC                                    + G + 
Sbjct: 489 AEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVA 548

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
             R +FD M +    +WNAML+ Y Q  +  EA+ LF+ M    V P+  TL  ++S+C+
Sbjct: 549 EARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACS 608

Query: 416 AMGILESGKQVH---AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIV 471
             G+++ G+++        K      +Y    ++ +  +  R + AE     +P E DI 
Sbjct: 609 RAGLVQEGREIFRMMQEDFKMTPRKQHY--GCMVDLLGRAGRLQEAEEFIQSMPCEPDIS 666

Query: 472 CWNSMIAG 479
            W++++  
Sbjct: 667 VWHALLGA 674



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 201/444 (45%), Gaps = 81/444 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+HI   GL  D  + N LI +Y KCN+   A+ +FD+M  +D+ SW+A+++   +
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQ 336

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S      YK  + + E                        +  +M  EG  P  +T  S+
Sbjct: 337 S-----GYKDKESIDE---------------------VFQLLERMRREGVFPNKVTFMSI 370

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLD-------------------------------KNI 155
            +A TA   +E GR+ H  + K+G +                               KN+
Sbjct: 371 LRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNV 430

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
               + LS+Y KCG    A  VF EM   N V++  M++G A+   +V+  E+   M  +
Sbjct: 431 VAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAE 490

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
               D V++ ++L     E CG  + +             G+ VH   +KLG E+D  ++
Sbjct: 491 GFQPDRVTVITIL-----EACGALAGL-----------ERGKLVHAEAVKLGLESDTVVA 534

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
            SL+ MY+K G +  A  +F  +  R  V+WN M+AGYGQ     +A++L +RM      
Sbjct: 535 TSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVS 594

Query: 336 PDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIK 390
           P+E+T   ++ AC R+G ++ GRE+F  M      +P    +  M+    ++   +EA +
Sbjct: 595 PNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEE 654

Query: 391 LFREMQFRGVKPDRTTLAIILSSC 414
             + M     +PD +    +L +C
Sbjct: 655 FIQSMP---CEPDISVWHALLGAC 675


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 242/783 (30%), Positives = 392/783 (50%), Gaps = 92/783 (11%)

Query: 7   GKLLHAHILRNGLF---DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           G+ +HAH +  G     DD FL  +L+ +Y +C                           
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCG-------------------------- 109

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM---SNEGFVPTH 120
             + DD   A +LF+ MP R V SWN L+ A + +G   +A+ VY  M   +  G  P  
Sbjct: 110 --RVDD---ARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDG 164

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            TLASV KA  A  D   G   HGL +K+GLDK+  VANAL+ +YAKCG    A+ VFE 
Sbjct: 165 CTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEW 224

Query: 181 MSEP--NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           + +   +  ++ +++SG  +  R +EAL +FR M      ++S +  +VL VCA  G   
Sbjct: 225 LQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGL-- 282

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                            G+++H   +K G E ++   N+LL MYAK G +DSA  +F  +
Sbjct: 283 --------------LSLGRELHAALLKCGSELNIQ-CNALLVMYAKYGRVDSALRVFGQI 327

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------- 348
            E+  +SWN M++ Y Q     +AI+    M   GF+PD    +++  A           
Sbjct: 328 AEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGR 387

Query: 349 -------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                    ++ G I+   ++F+SM      SW  +L+ ++QS 
Sbjct: 388 EFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSS 447

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
            H EA+++  E+Q  G+  D   +  IL +C  +  +   KQVH  +++    +D  + +
Sbjct: 448 RHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILEN 506

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            LI IY +C   + +  +F R+ + DIV W SMI   + N     A   F +M++  + P
Sbjct: 507 RLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQP 566

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              +  ++L + A LSS  +G+QVH  + +  +  +  V S+L++MY  CG +  A + F
Sbjct: 567 DSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVF 626

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           +    K+ V W  MI+    +G+G +A+ L+K M+ +G+ PD ++F+A+L ACSHS LV+
Sbjct: 627 ERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVE 686

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G    + M   + ++P  +HY C++D LGR+G   EA   I  MP      +W  LL +
Sbjct: 687 EGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGA 746

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           CR+H N  LA  AA +L  L+P N   Y L++N+++ +G+W++ +  R  M+E  + K+P
Sbjct: 747 CRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNP 806

Query: 744 AYS 746
           A S
Sbjct: 807 ACS 809



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 9/249 (3%)

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS---HIDNYVASGLIGI 448
            R++  R   P R     +L   AA      G+QVHA ++ T S     D ++A+ L+ +
Sbjct: 46  LRQLTTR-APPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFM 104

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM---YPTQ 505
           Y +C R + A R+F+ +P   +  WN+++     +    EA   +  MR +      P  
Sbjct: 105 YGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDG 164

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            + A+VL +C        G +VH    K G      V +ALI MY KCG +  A + F+ 
Sbjct: 165 CTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEW 224

Query: 566 MH--GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           +    ++  +WN ++ G  QNG   EA+ L++ M ++G   +  T VA+L  C+  GL+ 
Sbjct: 225 LQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLS 284

Query: 624 VGVEIFNSM 632
           +G E+  ++
Sbjct: 285 LGRELHAAL 293


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/686 (33%), Positives = 367/686 (53%), Gaps = 72/686 (10%)

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLD-KNIYVANALLSLYAKCGWTKH 173
           G  P +    ++ KA   L D+E G++ H  V K G    ++ VAN L++LY KCG    
Sbjct: 5   GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
              VF+ +SE N+V++ +++S L   ++   ALE FR M+ + V   S +L SV+  C+ 
Sbjct: 65  VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124

Query: 234 ----EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
               EG                  + G+QVH   ++ G E +  + N+L+ MY K G + 
Sbjct: 125 LPMPEGL-----------------MMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLA 166

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC- 348
           S++V+  +   R +V+WN +++   Q  Q  +A+E L+ M   G EPDE T  ++L AC 
Sbjct: 167 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 226

Query: 349 ----VRSG-------------------------------DIKTGREMFDSMPSPSVSSWN 373
               +R+G                                + +GR +FD M    +  WN
Sbjct: 227 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 286

Query: 374 AMLSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           AM++ YSQ+E+ KEA+ LF  M+   G+  + TT+A ++ +C   G     + +H   +K
Sbjct: 287 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 346

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                D +V + L+ +YS+  + ++A R+F ++ + D+V WN+MI G   +    +A + 
Sbjct: 347 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 406

Query: 493 FKQMRQNE-----------MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
             +M+  E           + P   +  T+L SCA LS+  +G+++HA   K+    D+ 
Sbjct: 407 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 466

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           VGSAL++MY KCG +  +R+ FD +  KN +TWN +I  Y  +G G EA+ L + M+  G
Sbjct: 467 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 526

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           VKP+++TF+++  ACSHSG+VD G+ IF  M+ D+GVEP  DHY C++D LGRAG   EA
Sbjct: 527 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 586

Query: 662 EMLIDEMPCK-DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
             L++ MP   +    W  LL + R+H N+ + + AA+ L +L+P  ++ Y LLANIYSS
Sbjct: 587 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 646

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
            G WD    VR  M E  + K+P  S
Sbjct: 647 AGLWDKATEVRRNMKEQGVRKEPGCS 672



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 278/615 (45%), Gaps = 105/615 (17%)

Query: 7   GKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK +HAH+ + G   D   + N L+ LY KC                             
Sbjct: 29  GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG---------------------------- 60

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
              D    YK+FD + ERN VSWN+LIS+L      E AL  +  M +E   P+  TL S
Sbjct: 61  ---DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 117

Query: 126 VFKASTALLDVE---HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           V  A + L   E    G++ H   ++ G + N ++ N L+++Y K G    +  +     
Sbjct: 118 VVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFG 176

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + VT+  ++S L + ++++EALE  R M+ + V  D  ++SSVL  C           
Sbjct: 177 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC----------- 225

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
              S  +  R   G+++H   +K G  + +  + ++L+DMY     + S   +F  + +R
Sbjct: 226 ---SHLEMLRT--GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 280

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRS--------- 351
            +  WN MIAGY Q     +A+ L   M +S G   +  T   ++ ACVRS         
Sbjct: 281 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 340

Query: 352 --------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                     G I     +F  M    + +WN M++ Y  SE+H
Sbjct: 341 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 400

Query: 386 KEAIKLFREMQ------FRG-----VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           ++A+ L  +MQ       +G     +KP+  TL  IL SCAA+  L  GK++HA ++K  
Sbjct: 401 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 460

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V S L+ +Y+KC   +++ +VF +IP+ +++ WN +I    ++    EA    +
Sbjct: 461 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 520

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV---NDIFVGSALIEMYC 551
            M    + P + +F +V ++C+      +G ++   ++ D  V   +D +  + ++++  
Sbjct: 521 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY--ACVVDLLG 578

Query: 552 KCGDIYGARQFFDMM 566
           + G I  A Q  +MM
Sbjct: 579 RAGRIKEAYQLMNMM 593



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 65/408 (15%)

Query: 6   AGKLLHAHILRNGLFDD-TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
            GK LHA+ L+NG  D+ +F+ + L+++Y  C    S + +FD M               
Sbjct: 233 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM--------------- 277

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITL 123
                       FD    R +  WN +I+   +N  +++AL ++  M  + G +    T+
Sbjct: 278 ------------FD----RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 321

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A V  A             HG V+K GLD++ +V N L+ +Y++ G    A+ +F +M +
Sbjct: 322 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 381

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLM-----------IRKAVSIDSVSLSSVLGVCA 232
            + VT+  M++G   ++   +AL +   M            R ++  +S++L ++L  CA
Sbjct: 382 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 441

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                             S    G+++H   IK     D+ + ++L+DMYAK G +  + 
Sbjct: 442 ----------------ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 485

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  +P+++V++WNV+I  YG      +AI+LL+ M   G +P+EVT I++  AC  SG
Sbjct: 486 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 545

Query: 353 DIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
            +  G  +F  M       PS   +  ++    ++   KEA +L   M
Sbjct: 546 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 593



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 109/490 (22%), Positives = 195/490 (39%), Gaps = 75/490 (15%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H  +++ GL  D F+ N L+++YS+      A  +F KM  +D+ +WN +++    S+ 
Sbjct: 340 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 399

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
            E A  L  +M                   LE K   V    S     P  ITL ++  +
Sbjct: 400 HEDALLLLHKM-----------------QNLERK---VSKGASRVSLKPNSITLMTILPS 439

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
             AL  +  G+  H   IK  L  ++ V +AL+ +YAKCG  + +  VF+++ + N +T+
Sbjct: 440 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 499

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDN 248
             ++          EA+++ R+M+ + V  + V+  SV   C+  G   E   +F     
Sbjct: 500 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 559

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN-----------------GDMDSA 291
            +          C+   LG    +  +  L++M  ++                  +++  
Sbjct: 560 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIG 619

Query: 292 EVIFSNLP--ERSVVSWNVMIAG-YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
           E+   NL   E +V S  V++A  Y       KA E+ + MK  G   +   S       
Sbjct: 620 EIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSW------ 673

Query: 349 VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
                I+ G E+   +   S    +  LS Y ++        L+  M+  G  PD     
Sbjct: 674 -----IEHGDEVHKFVAGDSSHPQSEKLSGYLET--------LWERMRKEGYVPD----- 715

Query: 409 IILSSCAAMGILESGKQV----HAASLKTASHIDNYVASGLIGIYSK---CQRNELAERV 461
              +SC    + E  K++    H+  L  A  I N     +I +      C    LA + 
Sbjct: 716 ---TSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKF 772

Query: 462 FHRIPELDIV 471
             +I + +I+
Sbjct: 773 ISKIVDREII 782


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 221/657 (33%), Positives = 351/657 (53%), Gaps = 52/657 (7%)

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV +       +E G+R H ++I  G+  +  +   L+ +Y  CG       +F+++   
Sbjct: 99  SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
               +  +MS  AK     E++ +F+ M +  V  +  + + VL   A  G   E     
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC---- 214

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                       ++VH   +KLGF ++  + NSL+  Y K G ++SA  +F  L E  VV
Sbjct: 215 ------------KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVV 262

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------ 358
           SWN MI G      S   +E+  +M   G E D  T +++LVAC   G++  GR      
Sbjct: 263 SWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFG 322

Query: 359 -----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                        E+F  M   ++ SW +++++Y +   + +AI
Sbjct: 323 VKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAI 382

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF EMQ +GV+PD  T+  I+ +CA    L+ G+ VH+  +K     +  V + LI +Y
Sbjct: 383 GLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMY 442

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC   E A  VF +IP  DIV WN+MI G S N L  EA   F  M Q +  P   + A
Sbjct: 443 AKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMA 501

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
            VL +CA L++  +GR++H  I + GY +D+ V  AL++MY KCG +  A+  FDM+  K
Sbjct: 502 CVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKK 561

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + ++W  MI GY  +G+G+EA+  + +M  +G++PD+ +F AIL ACSHSGL++ G + F
Sbjct: 562 DLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFF 621

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           NSM+ + GVEP L+HY C++D L R G+  +A   I+ MP K D  IW VLLS CR+H +
Sbjct: 622 NSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHD 681

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           V+LA++ AE +F L+P N+  Y +LAN+Y+   +W++++ +R+ M +    ++P  S
Sbjct: 682 VKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCS 738



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 169/617 (27%), Positives = 291/617 (47%), Gaps = 85/617 (13%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           KK+   GK +H+ I+ NG+  D  L  +L+ +Y  C +    + +FDK+ +  ++ WN +
Sbjct: 107 KKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLL 166

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +S   K  +                                 +++S++ KM   G V   
Sbjct: 167 MSEYAKIGNF-------------------------------RESVSLFKKMQKLGVVGNC 195

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T   V K   AL  V+  +R HG V+K+G   N  V N+L++ Y K G  + A  +F+E
Sbjct: 196 YTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDE 255

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           +SEP+ V++ +M++G          LE+F  M+   V +D  +L SVL  CA  G     
Sbjct: 256 LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIG----- 310

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                 +    R +HG       +K  F  ++  SN+LLDMY+K G+++ A  +F  + +
Sbjct: 311 ------NLSLGRALHG-----FGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD 359

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD--EVTSINMLVAC---------- 348
            ++VSW  +IA Y ++   + AI L   M+S G  PD   VTSI    AC          
Sbjct: 360 TTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV 419

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G ++  R +F  +P   + SWN M+  YSQ+   
Sbjct: 420 HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLP 479

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            EA++LF +MQ +  KPD  T+A +L +CA +  L+ G+++H   L+     D +VA  L
Sbjct: 480 NEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACAL 538

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC    LA+ +F  IP+ D++ W  MIAG  ++    EA   F +MR   + P +
Sbjct: 539 VDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDE 598

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            SF+ +L++C+      +G +    +  + G    +   + ++++  + G++  A +F +
Sbjct: 599 SSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIE 658

Query: 565 MMHGK-NTVTWNEMIHG 580
            M  K +T  W  ++ G
Sbjct: 659 SMPIKPDTTIWGVLLSG 675


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 235/709 (33%), Positives = 357/709 (50%), Gaps = 51/709 (7%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A  LF E+  R  + WN +I  L   G  + AL  Y KM      P   T   V KA   
Sbjct: 65  AGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGG 124

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           L +V      H     +G   +++  +AL+ LYA  G+ + A  VF+E+   + + +  M
Sbjct: 125 LNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVM 184

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           + G  K+     A+  F  M      ++SV+ + +L +CA  G                 
Sbjct: 185 LRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRG----------------N 228

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G Q+H L I  GFE D  ++N+L+ MY+K G++  A  +F+ +P+   V+WN +IAG
Sbjct: 229 FCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAG 288

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG-------------------- 352
           Y Q   + +A  L   M S G +PD VT  + L + + SG                    
Sbjct: 289 YVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFD 348

Query: 353 ---------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                          D++  R++F       V+   AM+S Y     + +AI  FR +  
Sbjct: 349 VYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQ 408

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
            G+  +  T+A +L +CAA+  L+ GK++H   LK        V S +  +Y+KC R +L
Sbjct: 409 EGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDL 468

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A   F R+ + D VCWNSMI+  S N     A   F+QM  +       S ++ LS+ A 
Sbjct: 469 AYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAAN 528

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           L + + G+++H  + ++ + +D FV S LI+MY KCG++  A   F++M GKN V+WN +
Sbjct: 529 LPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSI 588

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I  Y  +G   E + LY +M+ +G+ PD +TF+ I++AC H+GLVD G+  F+ M  ++G
Sbjct: 589 IAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYG 648

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           +   ++HY CM+D  GRAG  HEA   I  MP   D  +W  LL +CRLH NV LAK A+
Sbjct: 649 IGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLAS 708

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             L  LDPKNS  Y LL+N+++  G W  +  VR LM E  + K P YS
Sbjct: 709 RHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYS 757



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 237/520 (45%), Gaps = 51/520 (9%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L S+F+A +    V+  R+ H  VI  G+      ++ +L LY  CG  + A  +F E+ 
Sbjct: 14  LESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELE 73

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
               + +  M+ GL        AL  +  M+   VS D  +   V+  C     G+ +  
Sbjct: 74  LRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACG----GLNNVP 129

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                           VH     LGF  DL   ++L+ +YA NG +  A  +F  LP R 
Sbjct: 130 LCMV------------VHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRD 177

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKS------------------------------- 331
            + WNVM+ GY +      AI     M++                               
Sbjct: 178 TILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHG 237

Query: 332 ----CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                GFE D   +  ++    + G++   R++F++MP     +WN +++ Y Q+    E
Sbjct: 238 LVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDE 297

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A  LF  M   GVKPD  T A  L S    G L   K+VH+  ++     D Y+ S LI 
Sbjct: 298 AAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALID 357

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y K    E+A ++F +   +D+    +MI+G  L+ L+I+A   F+ + Q  M     +
Sbjct: 358 VYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLT 417

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
            A+VL +CA +++   G+++H  I K    N + VGSA+ +MY KCG +  A +FF  M 
Sbjct: 418 MASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS 477

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
            +++V WN MI  ++QNG  + A+ L++ M  SG K D +
Sbjct: 478 DRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSV 517



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/523 (23%), Positives = 225/523 (43%), Gaps = 98/523 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG  LH  ++ +G   D  + N L+ +YSKC N   A+ LF+ MP  D  +WN       
Sbjct: 231 AGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNG------ 284

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    LI+  V+NG  ++A  ++N M + G  P  +T AS
Sbjct: 285 -------------------------LIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFAS 319

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              +      + H +  H  +++  +  ++Y+ +AL+ +Y K G  + A  +F++    +
Sbjct: 320 FLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVD 379

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
               TAM+SG       ++A+  FR +I++ +  +S++++SVL  CA             
Sbjct: 380 VAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACA------------- 426

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +    G+++HC  +K   E  +++ +++ DMYAK G +D A   F  + +R  V 
Sbjct: 427 ---AVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVC 483

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV-------------------------- 339
           WN MI+ + Q  +   AI+L ++M   G + D V                          
Sbjct: 484 WNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVI 543

Query: 340 ------------TSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                       T I+M   C   G++     +F+ M   +  SWN+++++Y      +E
Sbjct: 544 RNAFSSDTFVASTLIDMYSKC---GNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRE 600

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT-----ASHIDNYVA 442
            + L+ EM   G+ PD  T  +I+S+C   G+++ G  +H     T      + +++Y  
Sbjct: 601 CLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEG--IHYFHCMTREYGIGARMEHYAC 658

Query: 443 SGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS 484
             ++ +Y +  R   A      +P   D   W +++    L+ 
Sbjct: 659 --MVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHG 699



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 2/172 (1%)

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           ++  +C+  S   Q RQVH Q+   G  +     S ++ +Y  CG    A   F  +  +
Sbjct: 16  SLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELR 75

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
             + WN MI G    G+ D A+  Y  M+ S V PD  TF  ++ AC     V + + + 
Sbjct: 76  YALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 135

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           ++ +   G    L   + +I      G+  +A  + DE+P +D  ++W V+L
Sbjct: 136 DTAR-SLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDT-ILWNVML 185


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/693 (33%), Positives = 359/693 (51%), Gaps = 53/693 (7%)

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           N+LI  L   G  EKAL   + M          T  ++ +          G R H  V K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
                 + + NALLS++ + G    A  VF +M+E +  ++  ++ G AK     EAL +
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
           +  M+   +  D  +   VL       CG   D+             G++VH   I+ GF
Sbjct: 183 YHRMLWVGIRPDVYTFPCVL-----RTCGGLPDL-----------ARGREVHLHVIRYGF 226

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           E+D+ + N+L+ MY K GD+ SA ++F  +P R  +SWN MI+GY +     + + L   
Sbjct: 227 ESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFM 286

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------------------------- 360
           M+    +PD +T  +++ AC   GD + GRE+                            
Sbjct: 287 MREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGC 346

Query: 361 -------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
                  F  M    + SW AM+S Y ++   ++A++ +  M+  GV PD  T+A +LS+
Sbjct: 347 WDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSA 406

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           CA +G+L+ G  +H  + +T       VA+ LI +YSKC+  + A  VFHRIP  +++ W
Sbjct: 407 CAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISW 466

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
            S+I GL LN    EA  FF+QM  + + P   +  +VLS+CA++ +   G+++HA   +
Sbjct: 467 TSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALR 525

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G   D F+ +AL++MY +CG +  A   F+    K+  +WN ++ GYAQ G G  AV L
Sbjct: 526 TGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVEL 584

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +  MI S V PD+ITF ++L ACS SG+V  G+E F SM+    + P L HY  ++D LG
Sbjct: 585 FHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLG 644

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           RAG   +A   I +MP   DP IW  LL++CR++ NV L + AA+ +F +D K+   Y L
Sbjct: 645 RAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYIL 704

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L N+Y+  G+WD++  VR++M EN +  DP  S
Sbjct: 705 LCNLYADSGKWDEVARVRKIMRENRLTVDPGCS 737



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/545 (27%), Positives = 270/545 (49%), Gaps = 54/545 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA+LS   +  DL  A+ +F +M ER++ SWN L+    + G  ++AL++Y++M   G  
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T   V +    L D+  GR  H  VI+ G + ++ V NAL+++Y KCG    A  V
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+ M   + +++ AM+SG  + D  +E L +F +M    V  D ++++SV+  C      
Sbjct: 253 FDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACE----- 307

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                 A  D +  R VHG       IK GF A++ ++NSL+ M++  G  D AE++FS 
Sbjct: 308 ------ALGDERLGREVHG-----YVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSK 356

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +  + +VSW  MI+GY +     KA+E    M+  G  PDE+T  ++L AC   G +  G
Sbjct: 357 MEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG 416

Query: 358 -----------------------------------REMFDSMPSPSVSSWNAMLSSYSQS 382
                                               E+F  +P+ +V SW +++     +
Sbjct: 417 IMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLN 476

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               EA+  F++M    +KP+  TL  +LS+CA +G L  GK++HA +L+T    D ++ 
Sbjct: 477 YRSFEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLP 535

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + L+ +Y +C R E A   F+   E D+  WN ++ G +       A   F +M ++++ 
Sbjct: 536 NALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVN 594

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQ 561
           P + +F ++L +C++      G +    +E   ++  ++   ++++++  + G +  A +
Sbjct: 595 PDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYE 654

Query: 562 FFDMM 566
           F   M
Sbjct: 655 FIKKM 659



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 230/509 (45%), Gaps = 88/509 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H++R G   D  + N LI +Y KC +  SA+                       
Sbjct: 214 GREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSAR----------------------- 250

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +FD MP R+ +SWN +IS    N +  + L ++  M      P  +T+ SV
Sbjct: 251 --------LVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  AL D   GR  HG VIK G    + V N+L+ +++  G    A  VF +M   + 
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDL 362

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM+SG  K     +A+E + +M  + V  D ++++SVL  CA  G G+        
Sbjct: 363 VSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACA--GLGLLDK----- 415

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G  +H    + G  + + ++NSL+DMY+K   +D A  +F  +P ++V+SW
Sbjct: 416 ---------GIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISW 466

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
             +I G    Y+S +A+   Q+M     +P+ VT +++L AC R G +  G+E+      
Sbjct: 467 TSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALR 525

Query: 361 ----FDS-MPSP-----------------------SVSSWNAMLSSYSQSENHKEAIKLF 392
               FD  +P+                         V+SWN +L+ Y+Q      A++LF
Sbjct: 526 TGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELF 585

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA---SLKTASHIDNYVASGLIGIY 449
            +M    V PD  T   +L +C+  G++  G +   +       A ++ +Y  + ++ + 
Sbjct: 586 HKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHY--ASVVDLL 643

Query: 450 SKCQRNELAERVFHRIP-ELDIVCWNSMI 477
            +  R E A     ++P + D   W +++
Sbjct: 644 GRAGRLEDAYEFIKKMPIDPDPAIWGALL 672



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 215/463 (46%), Gaps = 21/463 (4%)

Query: 250 FSRNVHGQQV-----HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           FSRN+  +Q+     H +++           NSL+      GD++ A +   ++ E  V 
Sbjct: 32  FSRNIQTRQISLRKHHEISVLNPSSITAQNPNSLILELCLKGDLEKALIHLDSMQELQVS 91

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN------MLVACVRSGDIKTGR 358
                     +  +  +A     R+ S  +    VT +       +L   VR GD+    
Sbjct: 92  VEEETYIALLRLCEWKRAASEGSRVHS--YVSKTVTRLGVRLGNALLSMFVRFGDLVEAW 149

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            +F  M    + SWN ++  Y+++    EA+ L+  M + G++PD  T   +L +C  + 
Sbjct: 150 YVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLP 209

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            L  G++VH   ++     D  V + LI +Y KC     A  VF R+P  D + WN+MI+
Sbjct: 210 DLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMIS 269

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G   N + +E    F  MR+  + P   +  +V+S+C  L     GR+VH  + K G+V 
Sbjct: 270 GYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVA 329

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           ++ V ++LI+M+   G    A   F  M  K+ V+W  MI GY +NG  ++AV  Y  M 
Sbjct: 330 EVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIME 389

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
             GV PD+IT  ++L+AC+  GL+D G+ + +      G+   +     +ID   +    
Sbjct: 390 HEGVVPDEITIASVLSACAGLGLLDKGI-MLHEFADRTGLTSYVIVANSLIDMYSKCRCI 448

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
            +A  +   +P K+       ++S   +   +RL  R+ E LF
Sbjct: 449 DKALEVFHRIPNKN-------VISWTSIILGLRLNYRSFEALF 484


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 235/782 (30%), Positives = 391/782 (50%), Gaps = 87/782 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ LHA +L++ L    FL  +L+ +Y KC +                       
Sbjct: 60  KALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGS----------------------- 94

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   L  A K+FDEM ER + SWN L+ A V +G   +A+ +Y  M   G      
Sbjct: 95  --------LRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDAC 146

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE- 180
           T  SV KA  AL +   G   HG+ +K G  + ++V NAL+++Y KCG    A  +F+  
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGI 206

Query: 181 -MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            M + + V++ +++S        +EAL +FR M    V+ ++ +  + L        GVE
Sbjct: 207 MMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQ-------GVE 259

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
              F +          G  +H   +K    AD++++N+L+ MYAK G M+ A  +F ++ 
Sbjct: 260 DPSFVKL---------GMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESML 310

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            R  VSWN +++G  Q    + A+   + M++ G +PD+V+ +N++ A  RSG++  G+E
Sbjct: 311 CRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKE 370

Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
           +                                   F+ M    + SW  +++ Y+Q+E 
Sbjct: 371 VHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEF 430

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
           H EAI LFR++Q +G+  D   +  +L +C+ +      +++H    K     D  + + 
Sbjct: 431 HLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKR-DLADIMLQNA 489

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           ++ +Y +    + A R F  I   DIV W SMI     N L +EA   F  ++Q  + P 
Sbjct: 490 IVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPD 549

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
             +  + LS+ A LSS  +G+++H  + + G+  +  + S+L++MY  CG +  +R+ F 
Sbjct: 550 SIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFH 609

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            +  ++ + W  MI+    +G G++A+ L+K M    V PD ITF+A+L ACSHSGL+  
Sbjct: 610 SVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVE 669

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G   F  M+  + +EP  +HY CM+D L R+    EA   +  MP K    IW  LL +C
Sbjct: 670 GKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGAC 729

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
            +H+N  L + AA+EL + D +NS  Y+L++NI+++ GRW+D+  VR  M  N + K+P 
Sbjct: 730 HIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPG 789

Query: 745 YS 746
            S
Sbjct: 790 CS 791



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 139/283 (49%), Gaps = 18/283 (6%)

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           +++L  C A   L  G+Q+HA  LK  SH+  ++A+ L+ +Y KC     A +VF  + E
Sbjct: 50  SLLLDLCVAAKALPQGQQLHALLLK--SHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSE 107

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
             I  WN+++     +   +EA   +K MR   +     +F +VL +C  L  S  G ++
Sbjct: 108 RTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD--MMHGKNTVTWNEMIHGYAQNG 585
           H    K GY   +FV +ALI MY KCGD+ GAR  FD  MM  ++TV+WN +I  +   G
Sbjct: 168 HGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEG 227

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
              EA+ L++ M   GV  +  TFVA L        V +G+ I       HG     +H+
Sbjct: 228 NCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI-------HGAVLKSNHF 280

Query: 646 T------CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
                   +I    + G   +A  + + M C+ D V W  LLS
Sbjct: 281 ADVYVANALIAMYAKCGRMEDAGRVFESMLCR-DYVSWNTLLS 322


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 244/773 (31%), Positives = 377/773 (48%), Gaps = 108/773 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA  +  GL  D  + N LI+LYSK                      N ++        
Sbjct: 64  IHAKAITRGLGKDRIVGNLLIDLYSK----------------------NGLVLP------ 95

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
              A ++F+E+  R+ VSW  ++S   +NGL E+AL +Y +M   G VPT   L+SV  +
Sbjct: 96  ---ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSS 152

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            T       GR  H    K G     +V NAL++LY +CG  + A  VF +M   + VTF
Sbjct: 153 CTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTF 212

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             ++SG A+      ALE+F  M    +S D V++SS+L  CA  G     D+       
Sbjct: 213 NTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLG-----DL------- 260

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVSWNV 308
                 G Q+H    K G  +D  +  SLLD+Y K GD+++A VIF NL  R+ VV WN+
Sbjct: 261 ----QKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF-NLGNRTNVVLWNL 315

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI-----------KTG 357
           ++  +GQ     K+ EL  +M++ G  P++ T   +L  C  +G+I           KTG
Sbjct: 316 ILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTG 375

Query: 358 ------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                   R + + +    V SW +M++ Y Q E  K+A+  F+
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFK 435

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           EMQ  G+ PD   LA  +S CA +  +  G Q+HA    +    D  + + L+ +Y++C 
Sbjct: 436 EMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCG 495

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
           R   A   F  I   D + WN +++G + + L  EA   F +M Q+ +    F+F + LS
Sbjct: 496 RIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALS 555

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           + A L+   QG+Q+HA++ K G+  +  VG+ALI +Y KCG    A+  F  M  +N V+
Sbjct: 556 ASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS 615

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN +I   +Q+G G EA+  +  M                           G+  F SM 
Sbjct: 616 WNTIITSCSQHGRGLEALDFFDQMKKE------------------------GLSYFKSMS 651

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
             +G+ P  DHY C+ID  GRAG    A+  ++EMP   D ++W  LLS+C++H N+ + 
Sbjct: 652 DKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVG 711

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + AA+ L  L+P +SA Y LL+N Y+  G+W +   VR++M +  + K+P  S
Sbjct: 712 ELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRS 764



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 242/529 (45%), Gaps = 86/529 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS--AQ 64
           G+ +HA   + G   +TF+ N LI LY +C +   A+ +F  MPH+D  ++N ++S  AQ
Sbjct: 162 GRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQ 221

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
           C                                    E AL ++ +M + G  P  +T++
Sbjct: 222 CAHG---------------------------------EHALEIFEEMQSSGLSPDCVTIS 248

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  A  +L D++ G + H  + K G+  +  +  +LL LY KCG  + A+ +F   +  
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRT 308

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V +  ++    + + + ++ E+F  M    +  +  +   +L  C    C  E D+  
Sbjct: 309 NVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCT---CTGEIDL-- 363

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+Q+H L++K GFE+D+++S  L+DMY+K G ++ A  +   L E+ VV
Sbjct: 364 -----------GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           SW  MIAGY Q      A+   + M+ CG  PD +   + +  C                
Sbjct: 413 SWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARV 472

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               R G I+     F+ +      +WN ++S ++QS  H+EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           K+F  M   GVK +  T    LS+ A +  ++ GKQ+HA  +KT    +  V + LI +Y
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
            KC   E A+  F  + E + V WN++I   S +   +EA  FF QM++
Sbjct: 593 GKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKK 641



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 228/482 (47%), Gaps = 40/482 (8%)

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           ++H   I  G   D  + N L+D+Y+KNG +  A  +F  L  R  VSW  M++GY Q  
Sbjct: 63  EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------------------- 348
              +A+ L ++M   G  P      ++L +C                             
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN 182

Query: 349 ------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                 +R G  +    +F  MP     ++N ++S ++Q  + + A+++F EMQ  G+ P
Sbjct: 183 ALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSP 242

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  T++ +L++CA++G L+ G Q+H+   K     D  +   L+ +Y KC   E A  +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
           +     ++V WN ++      +   ++F  F QM+   + P QF++  +L +C       
Sbjct: 303 NLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEID 362

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G Q+H+   K G+ +D++V   LI+MY K G +  AR+  +M+  K+ V+W  MI GY 
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           Q+ Y  +A+  +K+M   G+ PD+I   + ++ C+    +  G++I   + +  G    +
Sbjct: 423 QHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVS-GYSGDV 481

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
             +  +++   R G   EA    +E+  KD+ + W  L+S     A   L + A +   R
Sbjct: 482 SIWNALVNLYARCGRIREAFSSFEEIEHKDE-ITWNGLVSG---FAQSGLHEEALKVFMR 537

Query: 703 LD 704
           +D
Sbjct: 538 MD 539



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 170/328 (51%), Gaps = 21/328 (6%)

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLF--REMQFRGVKPDRTTLAIILSSCAAMGI-L 420
           M     +S    L+ +   E+  + + LF  +  Q  G+ P     A  L +C   G   
Sbjct: 1   MTRRGAASLGWSLAGFLAQEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRW 58

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
           +   ++HA ++      D  V + LI +YSK      A RVF  +   D V W +M++G 
Sbjct: 59  QVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           + N L  EA   ++QM +  + PT +  ++VLSSC K     QGR VHAQ  K G+ ++ 
Sbjct: 119 AQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSET 178

Query: 541 FVGSALIEMYCKCGDIYGA-RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           FVG+ALI +Y +CG    A R F+DM H ++TVT+N +I G+AQ  +G+ A+ ++++M +
Sbjct: 179 FVGNALITLYLRCGSFRLAERVFYDMPH-RDTVTFNTLISGHAQCAHGEHALEIFEEMQS 237

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFN-----SMQLDHGVE-PILDHYTCMIDCLG 653
           SG+ PD +T  ++L AC+  G +  G ++ +      M  D+ +E  +LD Y    D   
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDV-- 295

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
                 E  ++I  +  + + V+W ++L
Sbjct: 296 ------ETALVIFNLGNRTNVVLWNLIL 317



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 135/636 (21%), Positives = 271/636 (42%), Gaps = 106/636 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH+++ + G+  D  +   L++LY KC                              
Sbjct: 263 GTQLHSYLFKAGMSSDYIMEGSLLDLYVKCG----------------------------- 293

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+E A  +F+     NVV WN ++ A  +     K+  ++ +M   G  P   T   +
Sbjct: 294 --DVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCI 351

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +  T   +++ G + H L +K G + ++YV+  L+ +Y+K GW + A  V E + E + 
Sbjct: 352 LRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDV 411

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T+M++G  + +   +AL  F+ M +  +  D++ L+S +  CA    G+++      
Sbjct: 412 VSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCA----GIKA------ 461

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q+H      G+  D+ + N+L+++YA+ G +  A   F  +  +  ++W
Sbjct: 462 ------MRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITW 515

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----FD 362
           N +++G+ Q     +A+++  RM   G + +  T ++ L A     +IK G+++      
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK 575

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA------- 415
           +  S      NA++S Y +  + ++A   F EM  R    +  +   I++SC+       
Sbjct: 576 TGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSER----NEVSWNTIITSCSQHGRGLE 631

Query: 416 AMGILESGKQVHAASLKTAS-------HIDNYVASGLIGIYSKCQRNELAERVFHRIP-E 467
           A+   +  K+   +  K+ S         D+Y    +I I+ +  + + A++    +P  
Sbjct: 632 ALDFFDQMKKEGLSYFKSMSDKYGIRPRPDHYAC--VIDIFGRAGQLDRAKKFVEEMPIA 689

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR-Q 526
            D + W ++++   ++  +IE      +    E+ P   +   +LS+   ++  +  R Q
Sbjct: 690 ADAMVWRTLLSACKVHK-NIEVGELAAK-HLLELEPHDSASYVLLSNAYAVTGKWANRDQ 747

Query: 527 V--------------HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           V               + IE    V+  FVG  L  +         A Q ++ +      
Sbjct: 748 VRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPL---------AEQIYNFL-----A 793

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
             N+ +   A+ GY  E   L+ D    G  P D+ 
Sbjct: 794 VINDRV---AKVGYKQEKYHLFHDKEQEGRDPTDLV 826



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 32/232 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G  +HA +  +G   D  + N L+ LY++C     A   F+++ HKD  +WN + 
Sbjct: 460 KAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGL- 518

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                         +S   ++GL E+AL V+ +M   G      
Sbjct: 519 ------------------------------VSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  S   AS  L +++ G++ H  VIK G      V NAL+SLY KCG  + A   F EM
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM 608

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           SE NEV++  +++  ++  R +EAL+ F  M ++ +S    S+S   G+  R
Sbjct: 609 SERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGLSYFK-SMSDKYGIRPR 659



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 506 FSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
             FA  L +C      +Q   ++HA+    G   D  VG+ LI++Y K G +  AR+ F+
Sbjct: 42  LDFACALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFE 101

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            +  ++ V+W  M+ GYAQNG G+EA+ LY+ M  +GV P      ++L++C+ + L   
Sbjct: 102 ELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G  + ++     G          +I    R G F  AE +  +MP + D V +  L+S  
Sbjct: 162 GRSV-HAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHR-DTVTFNTLISG- 218

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAP 710
             HA     + A E    +     +P
Sbjct: 219 --HAQCAHGEHALEIFEEMQSSGLSP 242


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/693 (33%), Positives = 359/693 (51%), Gaps = 53/693 (7%)

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           N+LI  L   G  EKAL   + M          T  ++ +          G R H  V K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
                 + + NALLS++ + G    A  VF +M+E +  ++  ++ G AK     EAL +
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
           +  M+   +  D  +   VL       CG   D+             G++VH   I+ GF
Sbjct: 183 YHRMLWVGIRPDVYTFPCVL-----RTCGGLPDL-----------ARGREVHLHVIRYGF 226

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           E+D+ + N+L+ MY K GD+ SA ++F  +P R  +SWN MI+GY +     + + L   
Sbjct: 227 ESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFM 286

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------------------------- 360
           M+    +PD +T  +++ AC   GD + GRE+                            
Sbjct: 287 MREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGC 346

Query: 361 -------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
                  F  M    + SW AM+S Y ++   ++A++ +  M+  GV PD  T+A +LS+
Sbjct: 347 WDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSA 406

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           CA +G+L+ G  +H  + +T       VA+ LI +YSKC+  + A  VFHRIP  +++ W
Sbjct: 407 CAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISW 466

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
            S+I GL LN    EA  FF+QM  + + P   +  +VLS+CA++ +   G+++HA   +
Sbjct: 467 TSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALR 525

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G   D F+ +AL++MY +CG +  A   F+    K+  +WN ++ GYAQ G G  AV L
Sbjct: 526 TGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVEL 584

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +  MI S V PD+ITF ++L ACS SG+V  G+E F SM+    + P L HY  ++D LG
Sbjct: 585 FHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLG 644

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           RAG   +A   I +MP   DP IW  LL++CR++ NV L + AA+ +F +D K+   Y L
Sbjct: 645 RAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYIL 704

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L N+Y+  G+WD++  VR++M EN +  DP  S
Sbjct: 705 LCNLYADSGKWDEVARVRKIMRENRLTVDPGCS 737



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/545 (27%), Positives = 270/545 (49%), Gaps = 54/545 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA+LS   +  DL  A+ +F +M ER++ SWN L+    + G  ++AL++Y++M   G  
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T   V +    L D+  GR  H  VI+ G + ++ V NAL+++Y KCG    A  V
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+ M   + +++ AM+SG  + D  +E L +F +M    V  D ++++SV+  C      
Sbjct: 253 FDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACE----- 307

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                 A  D +  R VHG       IK GF A++ ++NSL+ M++  G  D AE++FS 
Sbjct: 308 ------ALGDERLGREVHG-----YVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSK 356

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +  + +VSW  MI+GY +     KA+E    M+  G  PDE+T  ++L AC   G +  G
Sbjct: 357 MEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG 416

Query: 358 -----------------------------------REMFDSMPSPSVSSWNAMLSSYSQS 382
                                               E+F  +P+ +V SW +++     +
Sbjct: 417 IMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLN 476

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               EA+  F++M    +KP+  TL  +LS+CA +G L  GK++HA +L+T    D ++ 
Sbjct: 477 YRSFEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLP 535

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + L+ +Y +C R E A   F+   E D+  WN ++ G +       A   F +M ++++ 
Sbjct: 536 NALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVN 594

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQ 561
           P + +F ++L +C++      G +    +E   ++  ++   ++++++  + G +  A +
Sbjct: 595 PDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYE 654

Query: 562 FFDMM 566
           F   M
Sbjct: 655 FIKKM 659



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 230/509 (45%), Gaps = 88/509 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H++R G   D  + N LI +Y KC +  SA+                       
Sbjct: 214 GREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSAR----------------------- 250

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +FD MP R+ +SWN +IS    N +  + L ++  M      P  +T+ SV
Sbjct: 251 --------LVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  AL D   GR  HG VIK G    + V N+L+ +++  G    A  VF +M   + 
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDL 362

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM+SG  K     +A+E + +M  + V  D ++++SVL  CA  G G+        
Sbjct: 363 VSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACA--GLGLLDK----- 415

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G  +H    + G  + + ++NSL+DMY+K   +D A  +F  +P ++V+SW
Sbjct: 416 ---------GIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISW 466

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
             +I G    Y+S +A+   Q+M     +P+ VT +++L AC R G +  G+E+      
Sbjct: 467 TSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALR 525

Query: 361 ----FDS-MPSP-----------------------SVSSWNAMLSSYSQSENHKEAIKLF 392
               FD  +P+                         V+SWN +L+ Y+Q      A++LF
Sbjct: 526 TGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELF 585

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA---SLKTASHIDNYVASGLIGIY 449
            +M    V PD  T   +L +C+  G++  G +   +       A ++ +Y +  ++ + 
Sbjct: 586 HKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYAS--VVDLL 643

Query: 450 SKCQRNELAERVFHRIP-ELDIVCWNSMI 477
            +  R E A     ++P + D   W +++
Sbjct: 644 GRAGRLEDAYEFIKKMPIDPDPAIWGALL 672



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 215/463 (46%), Gaps = 21/463 (4%)

Query: 250 FSRNVHGQQV-----HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           FSRN+  +Q+     H +++           NSL+      GD++ A +   ++ E  V 
Sbjct: 32  FSRNIQTRQISLRKHHEISVLNPSSITAQNPNSLILELCLKGDLEKALIHLDSMQELQVS 91

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN------MLVACVRSGDIKTGR 358
                     +  +  +A     R+ S  +    VT +       +L   VR GD+    
Sbjct: 92  VEEETYIALLRLCEWKRAASEGSRVHS--YVSKTVTRLGVRLGNALLSMFVRFGDLVEAW 149

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            +F  M    + SWN ++  Y+++    EA+ L+  M + G++PD  T   +L +C  + 
Sbjct: 150 YVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLP 209

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            L  G++VH   ++     D  V + LI +Y KC     A  VF R+P  D + WN+MI+
Sbjct: 210 DLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMIS 269

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G   N + +E    F  MR+  + P   +  +V+S+C  L     GR+VH  + K G+V 
Sbjct: 270 GYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVA 329

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           ++ V ++LI+M+   G    A   F  M  K+ V+W  MI GY +NG  ++AV  Y  M 
Sbjct: 330 EVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIME 389

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
             GV PD+IT  ++L+AC+  GL+D G+ + +      G+   +     +ID   +    
Sbjct: 390 HEGVVPDEITIASVLSACAGLGLLDKGI-MLHEFADRTGLTSYVIVANSLIDMYSKCRCI 448

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
            +A  +   +P K+       ++S   +   +RL  R+ E LF
Sbjct: 449 DKALEVFHRIPNKN-------VISWTSIILGLRLNYRSFEALF 484


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 227/734 (30%), Positives = 383/734 (52%), Gaps = 59/734 (8%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+    A++   CK   +E A  +FD M +R+VV WN ++   V  G  E+A+ +  +M 
Sbjct: 87  DVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMG 146

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWT 171
            E   P   T+ ++  A     ++  GR  HG  ++ G+ D N +VA AL+  Y +  + 
Sbjct: 147 RENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLR--FD 204

Query: 172 KHAVPV-FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              +P+ F+ M   N V++ AM+SG        +ALE+F  M+   V  D V++   +  
Sbjct: 205 MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQA 264

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CA  G               S  + G+Q+H L IK  F  DL++ N+LL+MY+ NG ++S
Sbjct: 265 CAELG---------------SLKL-GKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLES 308

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-- 348
           +  +F ++P R    WN MI+ Y       +A++L  RM+S G + DE T + ML  C  
Sbjct: 309 SHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEE 368

Query: 349 ---------------VRSGD-------------------IKTGREMFDSMPSPSVSSWNA 374
                          ++SG                    +++ +++FD M    + SWN 
Sbjct: 369 LASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNT 428

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+ + +++    +A +LF  M+   +KP+  T+  IL++C  +  L+ G+ +H   +K +
Sbjct: 429 MILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHS 488

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             I+  + + L  +Y  C     A  +F   P+ D++ WN+MIA    N+   +A + F 
Sbjct: 489 IEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFH 548

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN--DIFVGSALIEMYCK 552
           +M  +E  P   +   VLSS   L++  QG+ +HA + + G+    D+ + +A I MY +
Sbjct: 549 RM-ISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYAR 607

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           CG +  A   F  +  +N ++WN MI GY  NG G +A+  +  M+  G +P+ +TFV++
Sbjct: 608 CGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSV 667

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L+ACSHSG +++G+++F+SM  D  V P L HY+C++D L R G   EA   ID MP + 
Sbjct: 668 LSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEP 727

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
           D  +W  LLSSCR +++ + AK   E+L +L+P N+  Y LL+N+Y++ G W ++R +R 
Sbjct: 728 DASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRT 787

Query: 733 LMSENCIVKDPAYS 746
            + E  + K P  S
Sbjct: 788 WLKEKGLRKPPGIS 801



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 178/634 (28%), Positives = 314/634 (49%), Gaps = 59/634 (9%)

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           WN++I        ++  LS Y +M + G +P + TL  V KA  A   VE G+  H  + 
Sbjct: 21  WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
              L  ++ V  A++  Y KCG+ + A  VF+ MS+ + V + AM+ G        EA+ 
Sbjct: 81  GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 140

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           + R M R+ +  +S ++ ++L  C  EG          S+ +  R VHG   +CL   + 
Sbjct: 141 LVREMGRENLRPNSRTMVALLLAC--EGA---------SELRLGRGVHG---YCLRNGM- 185

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F+++ H++ +L+  Y +  DM    ++F  +  R++VSWN MI+GY       KA+EL  
Sbjct: 186 FDSNPHVATALIGFYLR-FDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFV 244

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGR----------------------------- 358
           +M     + D VT +  + AC   G +K G+                             
Sbjct: 245 QMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNG 304

Query: 359 ------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                 ++F+S+P+     WN+M+S+Y+    H+EA+ LF  MQ  GVK D  T+ I+LS
Sbjct: 305 SLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLS 364

Query: 413 SCA--AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
            C   A G+L+ GK +HA  +K+   ID  + + L+ +Y++    E  +++F R+  +DI
Sbjct: 365 MCEELASGLLK-GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDI 423

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           + WN+MI  L+ N+L  +A   F++MR++E+ P  ++  ++L++C  ++    GR +H  
Sbjct: 424 ISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGY 483

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + K     +  + +AL +MY  CGD   AR  F+    ++ ++WN MI  Y +N    +A
Sbjct: 484 VMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKA 543

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD--HYTCM 648
           + L+  MI S  +P+ +T + +L++ +H   +  G +  ++     G    LD       
Sbjct: 544 LLLFHRMI-SEAEPNSVTIINVLSSFTHLATLPQG-QSLHAYVTRRGFSLGLDLSLANAF 601

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           I    R G    AE +   +P K + + W  +++
Sbjct: 602 ITMYARCGSLQSAENIFKTLP-KRNIISWNAMIA 634



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 205/429 (47%), Gaps = 58/429 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GK LHAH++++G+  D  L N L+ +Y++ N   S Q +FD+M   DI SWN      
Sbjct: 374 LKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWN------ 427

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +I AL RN L  +A  ++ +M      P   T+ 
Sbjct: 428 -------------------------TMILALARNTLRAQACELFERMRESEIKPNSYTII 462

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  A   +  ++ GR  HG V+K  ++ N  +  AL  +Y  CG    A  +FE   + 
Sbjct: 463 SILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDR 522

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + +++ AM++   K ++  +AL +F  MI +A   +SV++ +VL                
Sbjct: 523 DLISWNAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINVL---------------- 565

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFE--ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
            S    +    GQ +H    + GF    DL L+N+ + MYA+ G + SAE IF  LP+R+
Sbjct: 566 SSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRN 625

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           ++SWN MIAGYG   + + A+    +M   GF P+ VT +++L AC  SG I+ G ++F 
Sbjct: 626 IISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFH 685

Query: 363 SM-----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           SM      +P +  ++ ++   ++     EA +    M    ++PD +    +LSSC A 
Sbjct: 686 SMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMP---IEPDASVWRALLSSCRAY 742

Query: 418 GILESGKQV 426
              +  K +
Sbjct: 743 SDAKQAKTI 751



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 192/413 (46%), Gaps = 55/413 (13%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D+Y  NA+L+    +  LE +++LF+ +P R+   WN++ISA    G  E+A+ ++ +M
Sbjct: 288 EDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRM 347

Query: 112 SNEGFVPTHITLASVFKASTALLD-VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
            +EG      T+  +      L   +  G+  H  VIK G+  +  + NALLS+Y +   
Sbjct: 348 QSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNC 407

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            +    +F+ M   + +++  M+  LA+     +A E+F  M    +  +S ++ S+L  
Sbjct: 408 VESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAA 467

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           C    C             F R++HG       +K   E +  L  +L DMY   GD  +
Sbjct: 468 CEDVTC-----------LDFGRSIHG-----YVMKHSIEINQPLRTALADMYMNCGDEAT 511

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV- 349
           A  +F   P+R ++SWN MIA Y +  Q+ KA+ L  RM S   EP+ VT IN+L +   
Sbjct: 512 ARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINVLSSFTH 570

Query: 350 ------------------------------------RSGDIKTGREMFDSMPSPSVSSWN 373
                                               R G +++   +F ++P  ++ SWN
Sbjct: 571 LATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWN 630

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           AM++ Y  +    +A+  F +M   G +P+  T   +LS+C+  G +E G Q+
Sbjct: 631 AMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQL 683



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 155/315 (49%), Gaps = 8/315 (2%)

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           WN+++   +  +N +  +  + +M+  GV P+ TTL ++L +CAA   +E GK +H +  
Sbjct: 21  WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
            T    D  V + ++  Y KC   E A  VF  + + D+V WN+M+ G        EA +
Sbjct: 81  GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 140

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG-YVNDIFVGSALIEMY 550
             ++M +  + P   +   +L +C   S    GR VH    ++G + ++  V +ALI  Y
Sbjct: 141 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 200

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            +  D+      FD+M  +N V+WN MI GY   G   +A+ L+  M+   VK D +T +
Sbjct: 201 LRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTML 259

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEM 668
             + AC+  G + +G +I    QL    E + D Y    +++     G    +  L + +
Sbjct: 260 VAVQACAELGSLKLGKQIH---QLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESV 316

Query: 669 PCKDDPVIWEVLLSS 683
           P +D P +W  ++S+
Sbjct: 317 PNRDAP-LWNSMISA 330


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/772 (30%), Positives = 394/772 (51%), Gaps = 92/772 (11%)

Query: 19  LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFD 78
           L +D  LC R+I +Y+ C +                             DD  F   +FD
Sbjct: 116 LRNDDVLCTRIITMYAMCGS----------------------------PDDSRF---VFD 144

Query: 79  EMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKASTALLDVE 137
            +  +N+  WN +IS+  RN L ++ L  + +M S    +P H T   V KA   + DV 
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG 204

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
            G   HGLV+K GL ++++V NAL+S Y   G+   A+ +F+ M E N V++ +M+   +
Sbjct: 205 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264

Query: 198 KTDRVVEALEMFRLMIRK----AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
                 E+  +   M+ +    A   D  +L +VL VCARE                 R 
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE-----------------RE 307

Query: 254 VH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
           +  G+ VH   +KL  + +L L+N+L+DMY+K G + +A++IF     ++VVSWN M+ G
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367

Query: 313 YGQKYQSTKAIELLQRMKSCG--FEPDEVTSINMLVAC---------------------- 348
           +  +  +    ++L++M + G   + DEVT +N +  C                      
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427

Query: 349 -------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                         + G +   + +F  + S +V+SWNA++  ++QS + + ++    +M
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 487

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
           +  G+ PD  T+  +LS+C+ +  L  GK+VH   ++     D +V   ++ +Y  C   
Sbjct: 488 KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 547

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
              + +F  + +  +V WN++I G   N     A   F+QM    +     S   V  +C
Sbjct: 548 CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           + L S   GR+ HA   K    +D F+  +LI+MY K G I  + + F+ +  K+T +WN
Sbjct: 608 SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 667

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI GY  +G   EA++L+++M  +G  PDD+TF+ +LTAC+HSGL+  G+   + M+  
Sbjct: 668 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEA-EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
            G++P L HY C+ID LGRAG   +A  ++ +EM  + D  IW+ LLSSCR+H N+ + +
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + A +LF L+P+    Y LL+N+Y+ LG+W+D+R VR+ M+E  + KD   S
Sbjct: 788 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCS 839



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 164/636 (25%), Positives = 284/636 (44%), Gaps = 65/636 (10%)

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI-KIGLDKNIYVANALLSLYAKCGW 170
           S++ F+     L  + +AS    D+E GR+ H LV     L  +  +   ++++YA CG 
Sbjct: 76  SSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGS 135

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              +  VF+ +   N   + A++S  ++ +   E LE F  MI    S   +        
Sbjct: 136 PDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI----STTDLLPDHFTYP 191

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           C  + C   SDV             G  VH L +K G   D+ + N+L+  Y  +G +  
Sbjct: 192 CVIKACAGMSDVGI-----------GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD 240

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM----KSCGFEPDEVTSINMLV 346
           A  +F  +PER++VSWN MI  +     S ++  LL  M        F PD  T + +L 
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300

Query: 347 ACVRSGDIKTGRE-----------------------------------MFDSMPSPSVSS 371
            C R  +I  G+                                    +F    + +V S
Sbjct: 301 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRG--VKPDRTTLAIILSSCAAMGILESGKQVHAA 429
           WN M+  +S   +      + R+M   G  VK D  T+   +  C     L S K++H  
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS---LD 486
           SLK     +  VA+  +  Y+KC     A+RVFH I    +  WN++I G + ++   L 
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
           ++A +   QM+ + + P  F+  ++LS+C+KL S   G++VH  I ++    D+FV  ++
Sbjct: 481 LDAHL---QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 537

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           + +Y  CG++   +  FD M  K+ V+WN +I GY QNG+ D A+ +++ M+  G++   
Sbjct: 538 LSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 597

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           I+ + +  ACS    + +G E  ++  L H +E        +ID   + G   ++  + +
Sbjct: 598 ISMMPVFGACSLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN 656

Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
            +  K     W  ++    +H   + A +  EE+ R
Sbjct: 657 GLKEKSTAS-WNAMIMGYGIHGLAKEAIKLFEEMQR 691



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/546 (24%), Positives = 244/546 (44%), Gaps = 80/546 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +++ GL +D F+ N L+  Y        A  LFD MP +++ SWN+++     
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +   E ++ L  EM E N                            +  F+P   TL +V
Sbjct: 266 NGFSEESFLLLGEMMEEN---------------------------GDGAFMPDVATLVTV 298

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                   ++  G+  HG  +K+ LDK + + NAL+ +Y+KCG   +A  +F+  +  N 
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKA--VSIDSVSLSSVLGVCAREGCGVESDVFA 244
           V++  M+ G +         ++ R M+     V  D V++ + + VC  E        F 
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES-------FL 411

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            S          +++HC ++K  F  +  ++N+ +  YAK G +  A+ +F  +  ++V 
Sbjct: 412 PSL---------KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 462

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----- 359
           SWN +I G+ Q      +++   +MK  G  PD  T  ++L AC +   ++ G+E     
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522

Query: 360 ------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                         +FD+M   S+ SWN +++ Y Q+     A+
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            +FR+M   G++    ++  +  +C+ +  L  G++ HA +LK     D ++A  LI +Y
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +K      + +VF+ + E     WN+MI G  ++ L  EA   F++M++    P   +F 
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702

Query: 510 TVLSSC 515
            VL++C
Sbjct: 703 GVLTAC 708



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 208/441 (47%), Gaps = 30/441 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA +++  K   L +A ++F  +  + V SWN LI    ++     +L  + +M   G +
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T+ S+  A + L  +  G+  HG +I+  L+++++V  ++LSLY  CG       +
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+ M + + V++  +++G  +      AL +FR M+   + +  +S+  V G C+     
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL---- 609

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                             G++ H   +K   E D  ++ SL+DMYAKNG +  +  +F+ 
Sbjct: 610 ------------LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNG 657

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           L E+S  SWN MI GYG    + +AI+L + M+  G  PD++T + +L AC  SG I  G
Sbjct: 658 LKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 717

Query: 358 REMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
               D M S     P++  +  ++    ++    +A+++  E      + D      +LS
Sbjct: 718 LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE--EADVGIWKSLLS 775

Query: 413 SCAAMGILESGKQVHAASLK-TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
           SC     LE G++V A   +      +NYV   L  +Y+   + E   +V  R+ E+ + 
Sbjct: 776 SCRIHQNLEMGEKVAAKLFELEPEKPENYVL--LSNLYAGLGKWEDVRKVRQRMNEMSL- 832

Query: 472 CWNSMIAGLSLNSLDIEAFMF 492
                 AG S   L+ + F F
Sbjct: 833 ---RKDAGCSWIELNRKVFSF 850



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 193/457 (42%), Gaps = 90/457 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   ++  L  +  L N L+++YSKC    +AQ +F    +K++ SWN ++     
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKA--LSVYNKMS---NEGFVPTHI 121
             D    + +  +M               +  G + KA  +++ N +    +E F+P+  
Sbjct: 371 EGDTHGTFDVLRQM---------------LAGGEDVKADEVTILNAVPVCFHESFLPSL- 414

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
                             +  H   +K     N  VANA ++ YAKCG   +A  VF  +
Sbjct: 415 ------------------KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 456

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
                 ++ A++ G A+++    +L+    M    +  DS ++ S+L  C+         
Sbjct: 457 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS--------- 507

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                  K      G++VH   I+   E DL +  S+L +Y   G++ + + +F  + ++
Sbjct: 508 -------KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM-----KSCG----------------------- 333
           S+VSWN +I GY Q     +A+ + ++M     + CG                       
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620

Query: 334 -------FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                   E D   + +++    ++G I    ++F+ +   S +SWNAM+  Y      K
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           EAIKLF EMQ  G  PD  T   +L++C   G++  G
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 717



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 154/356 (43%), Gaps = 33/356 (9%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQH----LFDKMPHKDIYSWNAILSAQCK 66
           H  +  +GL  D+F    L+   SK  +    +     +      +D++ + ++LS    
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             +L     LFD M ++++VSWN +I+  ++NG  ++AL V+ +M   G     I++  V
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F A + L  +  GR  H   +K  L+ + ++A +L+ +YAK G    +  VF  + E + 
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 663

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
            ++ AM+ G        EA+++F  M R   + D ++   VL  C   G   E      Q
Sbjct: 664 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ 723

Query: 246 SDNKFSRNVHGQQVHCLTIKLGF-----------------EADLHLSNSLLDMYAKNGDM 288
             + F    + +   C+   LG                  EAD+ +  SLL     + ++
Sbjct: 724 MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNL 783

Query: 289 DSAEVIFSNL-------PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           +  E + + L       PE  V+  N + AG G K++  + +   QRM       D
Sbjct: 784 EMGEKVAAKLFELEPEKPENYVLLSN-LYAGLG-KWEDVRKVR--QRMNEMSLRKD 835


>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 219/733 (29%), Positives = 388/733 (52%), Gaps = 59/733 (8%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D++    ++   CK   L+ A K+FD+MP ++V SWN +IS L ++    +AL ++ +M 
Sbjct: 161 DVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQ 220

Query: 113 -NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIY--VANALLSLYAKCG 169
             EG  P  +++ ++  A + L DV+  +  HG V++    + ++  V+N+L+ +Y+KCG
Sbjct: 221 MEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVR----RCVFGVVSNSLIDMYSKCG 276

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
             K A  +F++M   +++++  MM+G        E L++   M RK + ++ +S      
Sbjct: 277 EVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKIS------ 330

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
                   V + V A ++ +      G++VH   ++LG  +D+ ++  ++ MYAK G++ 
Sbjct: 331 --------VVNSVLAATETRDLEK--GKEVHNYALQLGMTSDIVVATPIVSMYAKCGELK 380

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
            A+  F +L  R +V W+  ++   Q     +A+ + Q M+  G +PD+    +++ AC 
Sbjct: 381 KAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACA 440

Query: 350 RSGDIKTGREM-----------------------------------FDSMPSPSVSSWNA 374
                + G+ M                                   F+ M    V +WN 
Sbjct: 441 EISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNT 500

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           +++ +++  + + A+++F  +Q  GV+PD  T+  +LS+CA +  L  G   H   +K  
Sbjct: 501 LINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNG 560

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFF 493
              + +V   LI +Y+KC     AE +FH    + D V WN MIAG   N    EA   F
Sbjct: 561 IESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTF 620

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
            QM+   + P   +F T+L + + LS   +    HA I + G+++   +G++LI+MY K 
Sbjct: 621 NQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKS 680

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +  + + F  M  K T++WN M+ GYA +G G+ A+ L+  M  + V  D ++++++L
Sbjct: 681 GQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVL 740

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
           +AC H+GL+  G  IF SM   H +EP ++HY CM+D LG AG F E   LID+MP + D
Sbjct: 741 SACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPD 800

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
             +W  LL +C++H+NV+L + A   L +L+P+N+  Y +L++IY+  GRW D R  R  
Sbjct: 801 AQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSN 860

Query: 734 MSENCIVKDPAYS 746
           M+++ + K+P YS
Sbjct: 861 MTDHGLKKNPGYS 873



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 185/664 (27%), Positives = 316/664 (47%), Gaps = 61/664 (9%)

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           +++ WN+LI A  R  L ++A+  Y  MS  G  P   T   V KA T  LD   G   H
Sbjct: 91  SLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIH 150

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
             +    L+ ++++   L+ +Y K G   +A  VF++M   +  ++ AM+SGL+++    
Sbjct: 151 QDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPC 210

Query: 204 EALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
           EALE+F R+ + + V  DSVS+ ++    +R             D    +++HG  V   
Sbjct: 211 EALEIFQRMQMEEGVEPDSVSILNLAPAVSR-----------LEDVDSCKSIHGYVVRRC 259

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
              +       +SNSL+DMY+K G++  A  IF  +  +  +SW  M+AGY       + 
Sbjct: 260 VFGV-------VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEV 312

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRS------------------------------- 351
           ++LL  MK    + ++++ +N ++A   +                               
Sbjct: 313 LQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSM 372

Query: 352 ----GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
               G++K  +E F S+    +  W+A LS+  Q+    EA+ +F+EMQ  G+KPD+T L
Sbjct: 373 YAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTIL 432

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           + ++S+CA +     GK +H   +K     D  VA+ L+ +Y++C+    A  +F+R+  
Sbjct: 433 SSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHY 492

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            D+V WN++I G +       A   F +++ + + P   +  ++LS+CA L   + G   
Sbjct: 493 KDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICF 552

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM-MHGKNTVTWNEMIHGYAQNGY 586
           H  I K+G  +++ V  ALI+MY KCG +  A   F +  H K+ V+WN MI GY  NG 
Sbjct: 553 HGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGC 612

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
            +EA+  +  M    V+P+ +TFV IL A S+  ++   +  F++  +  G         
Sbjct: 613 ANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMA-FHACIIRMGFISSTLIGN 671

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK 706
            +ID   ++G    +E    EM  K   + W  +LS   +H         A  LF L  +
Sbjct: 672 SLIDMYAKSGQLSYSEKCFHEMENK-GTISWNAMLSGYAMHGQ----GEVALALFSLMQE 726

Query: 707 NSAP 710
              P
Sbjct: 727 THVP 730



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 215/463 (46%), Gaps = 44/463 (9%)

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------ 349
           S++ WN +I  Y + +   +AI+  Q M   G EPD+ T   +L AC             
Sbjct: 91  SLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIH 150

Query: 350 -----------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G +   R++FD MP   V+SWNAM+S  SQS N  
Sbjct: 151 QDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPC 210

Query: 387 EAIKLFREMQF-RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           EA+++F+ MQ   GV+PD  ++  +  + + +  ++S K +H   ++    +   V++ L
Sbjct: 211 EALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRC--VFGVVSNSL 268

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YSKC   +LA ++F ++   D + W +M+AG   +    E      +M++  +   +
Sbjct: 269 IDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNK 328

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            S    + +  +     +G++VH    + G  +DI V + ++ MY KCG++  A++FF  
Sbjct: 329 ISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLS 388

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           + G++ V W+  +    Q GY  EA+ ++++M   G+KPD     ++++AC+      +G
Sbjct: 389 LEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLG 448

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            ++ +   +   +   +   T ++    R   F  A  L + M  K D V W  L++   
Sbjct: 449 -KMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYK-DVVAWNTLINGFT 506

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYS-LLANIYSSLGRWDDL 727
              + RL   A E   RL      P S  + ++ S+    DDL
Sbjct: 507 KCGDPRL---ALEMFLRLQLSGVQPDSGTMVSLLSACALLDDL 546



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 200/456 (43%), Gaps = 61/456 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H ++++  +  D  +   L+ +Y++C +   A  LF++M +KD+ +WN        
Sbjct: 448 GKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWN-------- 499

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LI+   + G    AL ++ ++   G  P   T+ S+
Sbjct: 500 -----------------------TLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSL 536

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE-EMSEPN 185
             A   L D+  G   HG +IK G++  ++V  AL+ +YAKCG    A  +F       +
Sbjct: 537 LSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKD 596

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           EV++  M++G        EA+  F  M  ++V  + V+  ++L   +      E+  F  
Sbjct: 597 EVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAF-- 654

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                         H   I++GF +   + NSL+DMYAK+G +  +E  F  +  +  +S
Sbjct: 655 --------------HACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTIS 700

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN M++GY    Q   A+ L   M+      D V+ I++L AC  +G I+ GR +F SM 
Sbjct: 701 WNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMT 760

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 PS+  +  M+     +    E + L  +M     +PD      +L +C     +
Sbjct: 761 EKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMP---TEPDAQVWGALLGACKMHSNV 817

Query: 421 ESGKQV--HAASLKTASHIDNYVASGLIGIYSKCQR 454
           + G+    H   L+  + +   V S    IY++C R
Sbjct: 818 KLGEIALHHLLKLEPRNAVHYIVLS---DIYAQCGR 850



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 166/324 (51%), Gaps = 7/324 (2%)

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           +S+ +PS+  WN+++ +YS+    +EAIK ++ M + G++PD+ T   +L +C       
Sbjct: 85  NSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFH 144

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G  +H          D ++ +GL+ +Y K    + A +VF ++P  D+  WN+MI+GLS
Sbjct: 145 EGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLS 204

Query: 482 LNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
            +S   EA   F++M+  E + P   S   +  + ++L      + +H  + +       
Sbjct: 205 QSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFG-- 262

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            V ++LI+MY KCG++  A Q FD M  K+ ++W  M+ GY  +G   E ++L  +M   
Sbjct: 263 VVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRK 322

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFN-SMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
            +K + I+ V  + A + +  ++ G E+ N ++QL  G+   +   T ++    + G   
Sbjct: 323 HIKMNKISVVNSVLAATETRDLEKGKEVHNYALQL--GMTSDIVVATPIVSMYAKCGELK 380

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSS 683
           +A+     +  + D V+W   LS+
Sbjct: 381 KAKEFFLSLEGR-DLVVWSAFLSA 403


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/714 (33%), Positives = 362/714 (50%), Gaps = 56/714 (7%)

Query: 73  AYKLFDEMPERNV---VSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITLASVF 127
           A  +F  +P       + WN LI      G    A+  Y KM        P   TL  V 
Sbjct: 95  AVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVV 154

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K+  AL  +  GR  H     +GLD+++YV +AL+ +YA  G    A  VF+ M E + V
Sbjct: 155 KSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCV 214

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            +  MM G  K   V  A+ +FR+M       +  +L+  L VCA      E+D+ +   
Sbjct: 215 LWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCA-----AEADLLS--- 266

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G Q+H L +K G E ++ ++N+L+ MYAK   ++ A  +F  +P   +V+WN
Sbjct: 267 --------GVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWN 318

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------- 360
            MI+G  Q      A+ L   M+  G +PD VT  ++L A       K G+E+       
Sbjct: 319 GMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRN 378

Query: 361 ----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                       FD+  S  V   + M+S Y  +   + A+K+F
Sbjct: 379 CAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMF 438

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           R +   G+KP+   +A  L +CA+M  +  G+++H   LK A     YV S L+ +YSKC
Sbjct: 439 RYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKC 498

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
            R +L+  +F ++   D V WNSMI+  + N    EA   F+QM    +     + +++L
Sbjct: 499 GRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSIL 558

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           S+CA L + + G+++H  I K     D+F  SALI+MY KCG++  A + F+ M  KN V
Sbjct: 559 SACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEV 618

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +WN +I  Y  +G   E+V L   M   G K D +TF+A+++AC+H+G V  G+ +F  M
Sbjct: 619 SWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCM 678

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
             ++ +EP ++H +CM+D   RAG   +A   I +MP K D  IW  LL +CR+H NV L
Sbjct: 679 TEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVEL 738

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A+ A++ELF+LDP N   Y L++NI +  GRWD +  +R LM +  + K P YS
Sbjct: 739 AEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYS 792



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 269/566 (47%), Gaps = 53/566 (9%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D+Y  +A++     +  L+ A ++FD M ER+ V WN ++   V+ G    A+ ++  M
Sbjct: 180 RDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVM 239

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
              G  P   TLA       A  D+  G + H L +K GL+  + VAN L+S+YAKC   
Sbjct: 240 RASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCL 299

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
           + A  +F  M   + VT+  M+SG  +   V +AL +F  M +  +  DSV+L+S+L   
Sbjct: 300 EEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPAL 359

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
                  E + F Q          G+++H   ++     D+ L ++L+D+Y K  D+  A
Sbjct: 360 ------TELNGFKQ----------GKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMA 403

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
           + +F       VV  + MI+GY     S  A+++ + + + G +P+ V   + L AC   
Sbjct: 404 QNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASM 463

Query: 352 GDIKTGRE-----------------------------------MFDSMPSPSVSSWNAML 376
             ++ G+E                                   MF  M +    +WN+M+
Sbjct: 464 AAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMI 523

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           SS++Q+   +EA+ LFR+M   GVK +  T++ ILS+CA +  +  GK++H   +K    
Sbjct: 524 SSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIR 583

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D +  S LI +Y KC   ELA RVF  +PE + V WNS+I+    + L  E+      M
Sbjct: 584 ADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCM 643

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGD 555
           ++        +F  ++S+CA      +G ++   + ++ ++   +   S ++++Y + G 
Sbjct: 644 QEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGK 703

Query: 556 IYGARQFF-DMMHGKNTVTWNEMIHG 580
           +  A QF  DM    +   W  ++H 
Sbjct: 704 LDKAMQFIADMPFKPDAGIWGALLHA 729



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 206/413 (49%), Gaps = 55/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +I+RN    D FL + L+++Y KC                              
Sbjct: 368 GKEIHGYIVRNCAHVDVFLVSALVDIYFKCR----------------------------- 398

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+  A  +FD     +VV  + +IS  V N + E A+ ++  +   G  P  + +AS 
Sbjct: 399 --DVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVAST 456

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  ++  +  G+  HG V+K   +   YV +AL+ +Y+KCG    +  +F +MS  +E
Sbjct: 457 LPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDE 516

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+ +M+S  A+     EAL++FR MI + V  ++V++SS+L  CA    G+ +  +   
Sbjct: 517 VTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACA----GLPAIYY--- 569

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+++H + IK    ADL   ++L+DMY K G+++ A  +F ++PE++ VSW
Sbjct: 570 ---------GKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSW 620

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N +I+ YG      ++++LL  M+  GF+ D VT + ++ AC  +G ++ G  +F  M  
Sbjct: 621 NSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTE 680

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                P V   + M+  YS++    +A++   +M F   KPD      +L +C
Sbjct: 681 EYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPF---KPDAGIWGALLHAC 730


>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 800

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 243/774 (31%), Positives = 395/774 (51%), Gaps = 86/774 (11%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           LLH+H+L  GL  D     +LIE YS+     S++ +F+   + D + W  ++       
Sbjct: 19  LLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHV--- 75

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
                              W+N            +A+S+YNKM  +    +    +SV +
Sbjct: 76  -------------------WSNFCG---------EAISLYNKMIYKQIPISDFIFSSVLR 107

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           A     +++ G   HG +IK GLD +  V  +LL +Y   G   +A  VF+ M+  + V+
Sbjct: 108 ACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVS 167

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           +++++S         E LEMFRL++ + V +DSV++ S+ G C   G       F     
Sbjct: 168 WSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELG-------FL---- 216

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
           + +++VHG    C+ I+   E    L+++L+ MY++  D  SAE IFSN+  RS+ SW  
Sbjct: 217 RLAKSVHG----CI-IRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTA 271

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------- 358
           MI+ Y +     +A+++   M      P+ VT + +L +C     ++ G+          
Sbjct: 272 MISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHI 331

Query: 359 -------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                    ++  ++   ++ SWN ++S Y+     KEA+ +F 
Sbjct: 332 DLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFV 391

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI-DNYVASGLIGIYSKC 452
           +MQ +G  PD  +L+  +S+CA +G+L  G Q+H  ++K   HI D +V + LI +YSKC
Sbjct: 392 QMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIK--RHILDEFVQNSLIDMYSKC 449

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              +LA  +F RI    +V WNSMI G S     +EA   F QM  N +   + +F T +
Sbjct: 450 GHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAI 509

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
            +C+ +    +G+ +H ++   G   D+F+ +ALI+MY KCGD+  A + FD M  ++ V
Sbjct: 510 QACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVV 569

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +W+ MI G   +G  D A+ L+ +MI   +KP+DITF+ IL+ACSHSG V+ G   FNSM
Sbjct: 570 SWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSM 629

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
           + +  VEP L+H+ CM+D L RAG   EA  +I+ MP   +  IW  LL+ CR+H  + +
Sbjct: 630 K-NFEVEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDM 688

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +    +L  +   ++  Y+LL+NIY+  G WD  R VR  M    + K P YS
Sbjct: 689 IRNIERDLLDMRTDDTGYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYS 742



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 149/664 (22%), Positives = 297/664 (44%), Gaps = 87/664 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  I++ GL  D  +   L+ +Y       +A+ +FD M  +D+ SW++I      
Sbjct: 118 GEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSI------ 171

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    IS  V NG   + L ++  + ++      +T+ S+
Sbjct: 172 -------------------------ISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSI 206

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L  +   +  HG +I+  ++    + +AL+ +Y++C     A  +F  M   + 
Sbjct: 207 AGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSI 266

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++TAM+S   ++    +AL++F  M+   V+ ++V++ +VL  CA              
Sbjct: 267 ASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCA-------------- 312

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
              F+    G+ VHC  +K     D  L  +L++ YA+ G +   E +   + +R+++SW
Sbjct: 313 --GFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISW 370

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------- 359
           N++I+ Y  +    +A+ +  +M+  G  PD  +  + + AC   G +  G +       
Sbjct: 371 NMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIK 430

Query: 360 ---------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                      +FD + S SV +WN+M+  +SQ  N  EAI+LF
Sbjct: 431 RHILDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLF 490

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
            +M    +  +  T    + +C+ MG LE GK +H   +      D ++ + LI +Y+KC
Sbjct: 491 DQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKC 550

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM-FFKQMRQNEMYPTQFSFATV 511
               +A RVF  + E  +V W++MI G  ++  DI+A +  F +M Q EM P   +F  +
Sbjct: 551 GDLRIAHRVFDSMSERSVVSWSAMIGGCGMHG-DIDAAISLFAEMIQREMKPNDITFMNI 609

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKN 570
           LS+C+      +G+     ++      ++   + ++++  + GD+  A +  + M     
Sbjct: 610 LSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAE 669

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC-SHSGLVDVGVEIF 629
              W  +++G   +   D    + +D++   ++ DD  +  +L+   +  G  DV  ++ 
Sbjct: 670 ASIWGALLNGCRIHQRMDMIRNIERDLL--DMRTDDTGYYTLLSNIYAEEGNWDVSRKVR 727

Query: 630 NSMQ 633
           ++M+
Sbjct: 728 SAMK 731


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 224/654 (34%), Positives = 351/654 (53%), Gaps = 63/654 (9%)

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           + L+ +L + G   +AL +   M   G  P   T  S+ +       +   +  H  +I+
Sbjct: 33  DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92

Query: 149 IGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
              + ++I + N L+S+Y K G    A  VF+EM   N V++TAM++  A+ +   EAL 
Sbjct: 93  TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALG 152

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
            F  M    +  +  + +S+L  C       + +V  +              H   +K G
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPAC------TDLEVLGE-------------FHDEIVKGG 193

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           FE+++ + N L+DMYAK G ++ A  +F  +P+R VVSWN MIAGY Q      A++L Q
Sbjct: 194 FESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQ 253

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
            +     + D +T   M+    + GD++   E+F+ MP  ++ SWN M++ Y Q+ + KE
Sbjct: 254 EIP----KRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKE 309

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A KLF+ M      P+R  ++                              N V SG   
Sbjct: 310 AFKLFQIM------PERNVISW-----------------------------NAVISG--- 331

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
            +++  + E A ++F  +PE ++V WN+MIAG S N     A   F QM+  +M P   +
Sbjct: 332 -FAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTET 390

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           FA VL +CA L+   QG + H  + + G+ +D+ VG+ L+ MY KCG I  AR+ FD M 
Sbjct: 391 FAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMR 450

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            +++ + + MI GYA NG   E++ L++ M  +G+KPD +TFV +L+AC H+GLVD G +
Sbjct: 451 QQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQ 510

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F+ M   + + P ++HY CMID LGRAG F EA  LI++MP K D  +W  LLS+CR H
Sbjct: 511 YFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTH 570

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
            N+ L ++ A+ L  L+P+N APY LL+NIY++ GRWDD+ +VR  M +  + K
Sbjct: 571 NNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKK 624



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 222/423 (52%), Gaps = 34/423 (8%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
            H  I++ G   + F+ N L+++Y+K      A+ LFDKMP +D+ SWNA+++   ++  
Sbjct: 185 FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGL 244

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           +E A KLF E+P+R+V++WN +++   + G  E A+ ++ KM  +  V  +  +A     
Sbjct: 245 IEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGY--- 301

Query: 130 STALLDVEHGRRCHGL-VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
                 V++G       + +I  ++N+   NA++S +A+ G  + A+ +F+ M E N V+
Sbjct: 302 ------VQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVS 355

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           + AM++G ++  +   AL++F  M    +  ++ + + VL  CA         V  Q   
Sbjct: 356 WNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALA------VLEQ--- 406

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                  G + H + I+ GF++D+ + N+L+ MYAK G ++ A  +F  + ++   S + 
Sbjct: 407 -------GNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSA 459

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP--- 365
           MI GY     S +++EL ++M+  G +PD VT + +L AC  +G +  GR+ FD M    
Sbjct: 460 MIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFY 519

Query: 366 --SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
             +P++  +  M+    ++    EA  L  +M    +KPD      +LS+C     ++ G
Sbjct: 520 HITPAMEHYGCMIDLLGRAGCFDEANDLINKMP---IKPDADMWGSLLSACRTHNNIDLG 576

Query: 424 KQV 426
           ++V
Sbjct: 577 EKV 579



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 222/422 (52%), Gaps = 57/422 (13%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +DI   N ++S   K   L  A ++FDEMP +NVVSW  +I+A  R+   ++AL  + +M
Sbjct: 98  QDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEM 157

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
            + G  P H T AS+  A T   D+E     H  ++K G + N++V N L+ +YAK G  
Sbjct: 158 QDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCI 214

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
           + A  +F++M + + V++ AM++G  +   + +AL++F+ + ++    D ++ ++++   
Sbjct: 215 EFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKR----DVITWNTMMAGY 270

Query: 232 AREGCG-VES--DVFAQ--SDNKFSRNVH-GQQVHCLTIKLGF-------EADLHLSNSL 278
           A+  CG VE+  ++F +    N  S N      V   ++K  F       E ++   N++
Sbjct: 271 AQ--CGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAV 328

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +  +A+NG ++ A  +F  +PE +VVSWN MIAGY Q  Q+  A++L  +M+    +P+ 
Sbjct: 329 ISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNT 388

Query: 339 VTSINMLVAC----------------VRS-------------------GDIKTGREMFDS 363
            T   +L AC                +RS                   G I+  R++FD 
Sbjct: 389 ETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDR 448

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M     +S +AM+  Y+ +   KE+++LF +MQF G+KPDR T   +LS+C   G+++ G
Sbjct: 449 MRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEG 508

Query: 424 KQ 425
           +Q
Sbjct: 509 RQ 510



 Score = 47.4 bits (111), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 16/116 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA--- 63
           G   H  ++R+G   D  + N L+ +Y+KC +   A+ +FD+M  +D  S +A++     
Sbjct: 407 GNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAI 466

Query: 64  -QCKSDDLEFAYKLFDEM------PERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
             C  + LE    LF++M      P+R  V++  ++SA    GL ++    ++ M+
Sbjct: 467 NGCSKESLE----LFEQMQFTGLKPDR--VTFVGVLSACCHAGLVDEGRQYFDIMT 516


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/731 (30%), Positives = 388/731 (53%), Gaps = 83/731 (11%)

Query: 81  PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           P R+  SW + + +  R+    +A+S Y +M+  G  P +    +V KA + L D++ G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 141 RCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           + H   +K G    ++ VAN L+++Y KCG       VF+ +++ ++V++ + ++ L + 
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG--- 256
           ++  +ALE FR M  + + + S +L SV   C+  G                  +HG   
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGV-----------------MHGLRL 215

Query: 257 -QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
            +Q+H  ++++G +     +N+L+ MYAK G +D ++ +F +  +R +VSWN MI+ + Q
Sbjct: 216 GKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQ 274

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VRSGD------ 353
             + ++A+   + M   G E D VT  ++L AC                +R+ D      
Sbjct: 275 SDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSF 334

Query: 354 --------------IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM-QFR 398
                         +++GR +FD +    +  WNAM+S Y+++   ++A+ LF EM +  
Sbjct: 335 VGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVA 394

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G+ P+ TT+A ++ +C       + + +H  ++K     D YV + L+ +YS+  + +++
Sbjct: 395 GLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDIS 454

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-----------------M 501
           E +F  +   D V WN+MI G  L+     A +   +M++ E                  
Sbjct: 455 ETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPY 514

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P   +  TVL  CA L++  +G+++HA   ++   +DI VGSAL++MY KCG +  +R+
Sbjct: 515 KPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRR 574

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-----VKPDDITFVAILTAC 616
            F+ M  KN +TWN +I     +G G+EA+ L+K+M+A        KP+++TF+ +  AC
Sbjct: 575 VFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAAC 634

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV- 675
           SHSGL+  G+ +F  M+ DHGVEP  DHY C++D LGRAG   EA  L++ MP + D V 
Sbjct: 635 SHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVG 694

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMS 735
            W  LL +CR+H NV L + AA+ L  L+P  ++ Y LL+NIYSS G W+    VR+ M 
Sbjct: 695 AWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMR 754

Query: 736 ENCIVKDPAYS 746
           +  + K+P  S
Sbjct: 755 QMGVKKEPGCS 765



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 232/507 (45%), Gaps = 85/507 (16%)

Query: 75  KLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALL 134
           K+FD + +R+ VSWN+ I+AL R    E+AL  +  M  E    +  TL SV  A + L 
Sbjct: 149 KVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNL- 207

Query: 135 DVEHGRRC----HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
            V HG R     HG  +++G D+  +  NAL+++YAK G    +  +FE   + + V++ 
Sbjct: 208 GVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWN 266

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA---REGCGVESDVFAQSD 247
            M+S  +++DR  EAL  FRLM+ + V +D V+++SVL  C+   R   G E   +   +
Sbjct: 267 TMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRN 326

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
           N    N                    + ++L+DMY     ++S   +F ++  R +  WN
Sbjct: 327 NDLIENS------------------FVGSALVDMYCNCRQVESGRRVFDHILGRRIELWN 368

Query: 308 VMIAGYGQKYQSTKAIEL-LQRMKSCGFEPDEVTSINMLVACV----------------- 349
            MI+GY +     KA+ L ++ +K  G  P+  T  +++ ACV                 
Sbjct: 369 AMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVK 428

Query: 350 ------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             R G +     +FDSM      SWN M++ Y  S  +  A+ L
Sbjct: 429 LGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVL 488

Query: 392 FREMQFR-----------------GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
             EMQ                     KP+  TL  +L  CAA+  +  GK++HA +++  
Sbjct: 489 LHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNM 548

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V S L+ +Y+KC    L+ RVF+ +P  +++ WN +I    ++    EA   FK
Sbjct: 549 LASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFK 608

Query: 495 QM-----RQNEMYPTQFSFATVLSSCA 516
            M     R  E  P + +F TV ++C+
Sbjct: 609 NMVAEAGRGGEAKPNEVTFITVFAACS 635



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 232/494 (46%), Gaps = 86/494 (17%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +  ++ NA+++   K   ++ +  LF+   +R++VSWN +IS+  ++    +AL+ +  M
Sbjct: 229 QKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLM 288

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGW 170
             EG     +T+ASV  A + L  ++ G+  H  V++   L +N +V +AL+ +Y  C  
Sbjct: 289 VLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQ 348

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI-DSVSLSSVLG 229
            +    VF+ +       + AM+SG A+     +AL +F  MI+ A  + ++ +++SV+ 
Sbjct: 349 VESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMP 408

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            C      V  + F+  ++          +H   +KLGF+ D ++ N+L+DMY++ G MD
Sbjct: 409 AC------VHCEAFSNKES----------IHGYAVKLGFKEDRYVQNALMDMYSRMGKMD 452

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL---QRMKSCG------------- 333
            +E IF ++  R  VSWN MI GY    + + A+ LL   QRM++               
Sbjct: 453 ISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGG 512

Query: 334 -FEPDEVTSINMLVACVRSGDIKTGREM-------------------------------- 360
            ++P+ +T + +L  C     I  G+E+                                
Sbjct: 513 PYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLS 572

Query: 361 ---FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM---QFRG--VKPDRTTLAIILS 412
              F+ MP+ +V +WN ++ +       +EA++LF+ M     RG   KP+  T   + +
Sbjct: 573 RRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFA 632

Query: 413 SCAAMGILESG-----KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP- 466
           +C+  G++  G     +  H   ++  S  D+Y    ++ +  +  + E A  + + +P 
Sbjct: 633 ACSHSGLISEGLNLFYRMKHDHGVEPTS--DHYAC--VVDLLGRAGQLEEAYELVNTMPA 688

Query: 467 ELDIV-CWNSMIAG 479
           E D V  W+S++  
Sbjct: 689 EFDKVGAWSSLLGA 702



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 69/123 (56%), Gaps = 10/123 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA+ +RN L  D  + + L+++Y+KC   + ++ +F++MP+K++ +WN ++ A   
Sbjct: 537 GKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGM 596

Query: 67  SDDLEFAYKLFDEM---------PERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GF 116
               E A +LF  M          + N V++  + +A   +GL  + L+++ +M ++ G 
Sbjct: 597 HGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGV 656

Query: 117 VPT 119
            PT
Sbjct: 657 EPT 659


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/709 (33%), Positives = 374/709 (52%), Gaps = 73/709 (10%)

Query: 88  WNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITLASVFKASTALLDVEHGRRCHGL 145
           WN L++ L R G    AL++  ++  +++G  P   TL    K+       + GR+ H +
Sbjct: 33  WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQVHAV 88

Query: 146 VIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
             K+GL D + +V N+L+S+Y +CG    A  VFE M+  N V++ A+M+ +A   R   
Sbjct: 89  AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRR--- 145

Query: 205 ALEMFRLMIRK---AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
            LE+FR  +       + D  +L +VL +CA           A  +        G+ VH 
Sbjct: 146 GLELFRDCLEDLGGTAAPDEATLVTVLPMCA---------ALAWPET-------GRAVHG 189

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE---RSVVSWNVMIAGYGQKYQ 318
           L +K G++A   +SN L+DMYAK G+M  AE  F   P    R+VVSWNVM+ GY +  +
Sbjct: 190 LAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGE 249

Query: 319 STKAIELLQ--RMKSCGFEPDEVTSINMLVAC----------------VRSGDIKTGR-- 358
           +  A  LL+  +M+  G   DE+T +++L  C                VR G   TG   
Sbjct: 250 AGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMV 309

Query: 359 ------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR-G 399
                              +FD + S  VSSWNA++ +++Q+     AI+LFREM    G
Sbjct: 310 PNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACG 369

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
            KPD  ++  +L +C  +  L  GK  H   L+     D+++   L+ +Y +C R  LA 
Sbjct: 370 QKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLAR 429

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM--RQNEMYPTQFSFATVLSSCAK 517
            +F  + E D V WN+MIAG S N L  E+   F++M  ++   +P+  +  + L +C++
Sbjct: 430 VLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSE 489

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           L +   G+++H    K     D F+ S++I+MY KCG +  AR FFD +  K+ V+W  M
Sbjct: 490 LPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVM 549

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I GYA NG G EAV LY  M   G++PD  T++ +L AC H+G+++ G+  F  M+    
Sbjct: 550 ITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPK 609

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           +E  L+HY C+I  L RAG F +A  L++ MP + D  I   +LS+C +H  V L K+ A
Sbjct: 610 IEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVA 669

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++L  L+P  +  Y L +N+Y+   +WD++R VR+++ +  + K+P  S
Sbjct: 670 DKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCS 718



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 181/685 (26%), Positives = 294/685 (42%), Gaps = 153/685 (22%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ +HA   + GL D D F+ N L+ +Y +C                             
Sbjct: 82  GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCG---------------------------- 113

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALV--RNGLEEKALSVYNKMSNEG--FVPTHI 121
           + DD E   K+F+ M  RN+VSWN L++A+   R GLE       + + + G    P   
Sbjct: 114 RVDDAE---KVFEGMAGRNLVSWNALMAAVADPRRGLE----LFRDCLEDLGGTAAPDEA 166

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           TL +V     AL   E GR  HGL +K G D    V+N L+ +YAKCG    A   F E 
Sbjct: 167 TLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEA 226

Query: 182 SEP---NEVTFTAMMSGLAKTDRVVEALEMFR--LMIRKAVSIDSVSLSSVLGVCAREGC 236
                 N V++  M+ G A+      A  + R   M  + V  D +++ SVL VC     
Sbjct: 227 PPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVC----- 281

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS-----NSLLDMYAKNGDMDSA 291
                      +        +++H   ++ G    LHL+     N+L+  Y + G +  A
Sbjct: 282 -----------SGLPELAKLRELHAFVVRRG----LHLTGDMVPNALIAAYGRCGCLLHA 326

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVAC-- 348
             +F  +  + V SWN +I  + Q  +++ AIEL + M  +CG +PD  +  ++L+AC  
Sbjct: 327 CRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGN 386

Query: 349 --------------VRSG--------------DIKTGRE-----MFDSMPSPSVSSWNAM 375
                         +R+G               I+ GRE     +FD++      SWN M
Sbjct: 387 LKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTM 446

Query: 376 LSSYSQSENHKEAIKLFREMQFR--GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           ++ YSQ+    E+++LFREMQ +  G  P        L +C+ +  +  GK++H  +LK 
Sbjct: 447 IAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKA 506

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               D++++S +I +YSKC   + A   F R+   D V W  MI G ++N    EA   +
Sbjct: 507 DLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLY 566

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY-----VNDIFVGSALIE 548
            +M +  M P  F++  +L +C            HA + +DG      + ++    A +E
Sbjct: 567 DKMGREGMEPDGFTYLGLLMACG-----------HAGMLEDGLCFFQEMRNLPKIEAKLE 615

Query: 549 MY-CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
            Y C  G +  A +F D                         AV L + M     +PD  
Sbjct: 616 HYACVIGMLSRAGRFAD-------------------------AVALMEVMPE---EPDAK 647

Query: 608 TFVAILTACSHSGLVDVGVEIFNSM 632
              ++L+AC   G V++G ++ + +
Sbjct: 648 ILSSVLSACHMHGEVELGKKVADKL 672



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 202/391 (51%), Gaps = 24/391 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GF 116
           NA+++A  +   L  A ++FD +  + V SWN LI A  +NG    A+ ++ +M+N  G 
Sbjct: 311 NALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQ 370

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
            P   ++ S+  A   L  + HG+  HG +++ GL+K+ ++  +LLS+Y +CG    A  
Sbjct: 371 KPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARV 430

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F+ + E +EV++  M++G ++     E+L++FR M  K        L++          
Sbjct: 431 LFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAAT--------- 481

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
              S + A S+    R   G+++HC  +K     D  LS+S++DMY+K G +D A V F 
Sbjct: 482 ---SALVACSELPAVR--LGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFD 536

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            L  +  VSW VMI GY    +  +A+ L  +M   G EPD  T + +L+AC  +G ++ 
Sbjct: 537 RLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLED 596

Query: 357 GREMFDSMPS-PSVSS----WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           G   F  M + P + +    +  ++   S++    +A+ L   M+    +PD   L+ +L
Sbjct: 597 GLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVAL---MEVMPEEPDAKILSSVL 653

Query: 412 SSCAAMGILESGKQVHAASLKTASH-IDNYV 441
           S+C   G +E GK+V    L+   H  ++YV
Sbjct: 654 SACHMHGEVELGKKVADKLLELEPHKAEHYV 684


>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Vitis vinifera]
          Length = 634

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 224/617 (36%), Positives = 349/617 (56%), Gaps = 29/617 (4%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           +  G++ H  +I  GLD + ++   L+ +YA CG    A  +F+++S+PN   +TA++  
Sbjct: 39  LHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPNVFAWTAILGF 98

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
            ++     E +  +  M  K V  D      V   C +    +  +V             
Sbjct: 99  YSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQL---LWLEV------------- 142

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G QVH   +  G E DL + NSL+DMY+K+GD+ S   +F  + ER V+SWN MI+GY  
Sbjct: 143 GIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVC 202

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                 ++ELL  M+  GFEPD VT   ++ A  R G      E+F+ +  P++ S   +
Sbjct: 203 NGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTL 262

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVK-PDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           +S YS+  NH++++ +FREM  R V  PD  +L+ +L SC  +G L  G+++H   +++ 
Sbjct: 263 VSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSV 322

Query: 435 SHIDNYVASG--LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG---LSLNSLDIEA 489
                Y ++G  L+ +Y KC+R + A  VF  +   D+V WN+MI G   L +  L +E 
Sbjct: 323 DSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALEC 382

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
           F    +M+++ +   Q + +TVL +C   S    G+QVHA I K+ + + I V +ALI M
Sbjct: 383 F---SKMQRSGIMNNQITISTVLPACDLKS----GKQVHAYITKNSFSSVIPVWNALIHM 435

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y KCG I  A   F  M  ++ V+WN MI G+  +G G  A++L +DM  S V P+ +TF
Sbjct: 436 YSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTF 495

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
            + L+ACSHSGLVD G+E+F++M  D G  P ++H++C++D L RA    +A   I++MP
Sbjct: 496 TSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLEDAVGFIEKMP 555

Query: 670 CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRA 729
            K    IW  LL++CR   NV +AK AAE+LF+L+P+++  Y  L+NIY+  GRWDD  A
Sbjct: 556 LKPSKHIWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYVTLSNIYARAGRWDDAVA 615

Query: 730 VRELMSENCIVKDPAYS 746
           VR+LM +  +VK   YS
Sbjct: 616 VRKLMEDRGLVKPSGYS 632



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 227/492 (46%), Gaps = 69/492 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  ++  G   D  +CN LI++YSK  +  S + +FD+M  +D+ SWN+++S    
Sbjct: 143 GIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVC 202

Query: 67  SDDLEF-----------------------------------AYKLFDEMPERNVVSWNNL 91
           +  LEF                                   A+++F+++ E N++S   L
Sbjct: 203 NGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTL 262

Query: 92  ISALVRNGLEEKALSVYNK-MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG 150
           +S   R G  EK+L ++ + MS     P   +L+SV  +   L  +  G+  HG  I+  
Sbjct: 263 VSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSV 322

Query: 151 LDKNIY--VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
              + Y     ALL++Y KC   + A+ VFE M   + VT+ AM+ G    +    ALE 
Sbjct: 323 DSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALEC 382

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
           F  M R  +  + +++S+VL  C  +                     G+QVH    K  F
Sbjct: 383 FSKMQRSGIMNNQITISTVLPACDLKS--------------------GKQVHAYITKNSF 422

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
            + + + N+L+ MY+K G + +A  IFSN+  R +VSWN MI G+G       A++LL+ 
Sbjct: 423 SSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRD 482

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSE 383
           M      P+ VT  + L AC  SG +  G E+F +M      +P +  ++ ++   ++++
Sbjct: 483 MSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARAD 542

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK-TASHIDNYVA 442
             ++A+    +M    +KP +   + +L++C A   +   K       +    H  NYV 
Sbjct: 543 RLEDAVGFIEKMP---LKPSKHIWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYVT 599

Query: 443 SGLIGIYSKCQR 454
             L  IY++  R
Sbjct: 600 --LSNIYARAGR 609



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 255/573 (44%), Gaps = 63/573 (10%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   GK LH HI+  GL    F+  +L+++Y+ C +  SAQ                  
Sbjct: 37  KALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQ------------------ 78

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                         LFD++ + NV +W  ++    RNGL ++ +  Y++M  +G +P   
Sbjct: 79  -------------ALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKY 125

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
               VF+A   LL +E G + H  V+  G + ++ V N+L+ +Y+K G       VF+EM
Sbjct: 126 VFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEM 185

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVES 240
            E + +++ +M+SG      +  ++E+   M  +    D V+ ++V+    R G C    
Sbjct: 186 VERDVLSWNSMISGYVCNGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAW 245

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGF------EADLHLSNSLLDMYAKNGDMDSAEVI 294
           ++F Q       N+    +   T+  G+      E  L +   ++       D+DS   +
Sbjct: 246 EIFEQIKEP---NI----ISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSV 298

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
             +      +     I GYG      ++++     KS G        + M V C R   I
Sbjct: 299 LVSCRHLGALVCGQEIHGYG-----IRSVDSSSFYKSAG-----AALLTMYVKCKR---I 345

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +    +F+ M    V +WNAM+  +   E    A++ F +MQ  G+  ++ T++ +L +C
Sbjct: 346 QDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITISTVLPAC 405

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
                L+SGKQVHA   K +      V + LI +YSKC     A  +F  +   D+V WN
Sbjct: 406 D----LKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWN 461

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           +MI G  ++ L   A    + M  +++ P   +F + LS+C+      +G ++   + +D
Sbjct: 462 TMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRD 521

Query: 535 -GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
            G+   +   S ++++  +   +  A  F + M
Sbjct: 522 FGFTPGMEHFSCVVDLLARADRLEDAVGFIEKM 554



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 5/259 (1%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L  C+    L  GKQ+H   +        ++ + L+ +Y+ C     A+ +F ++ + +
Sbjct: 29  LLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPN 88

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +  W +++   S N L  E    + +M+   + P ++ F  V  +C +L     G QVH 
Sbjct: 89  VFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHK 148

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            +   G   D+ V ++LI+MY K GD+   R+ FD M  ++ ++WN MI GY  NG+ + 
Sbjct: 149 DVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEF 208

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           +V L   M   G +PD +T+  ++ A    GL D   EIF  ++     EP +   T ++
Sbjct: 209 SVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIK-----EPNIISLTTLV 263

Query: 650 DCLGRAGHFHEAEMLIDEM 668
               R G+  ++  +  EM
Sbjct: 264 SGYSRIGNHEKSLGIFREM 282



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 5/239 (2%)

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
           + F    +L  C+   +  QG+Q+H  I   G  +  F+ + L++MY  CGD+  A+  F
Sbjct: 22  SSFQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALF 81

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D +   N   W  ++  Y++NG  DE VR Y +M   GV PD   F  +  AC     ++
Sbjct: 82  DKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLE 141

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           VG+++   + +  G E  L     +ID   ++G       + DEM  + D + W  ++S 
Sbjct: 142 VGIQVHKDVVI-CGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEM-VERDVLSWNSMISG 199

Query: 684 --CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
             C       +   A+  +   +P +   ++ + + Y  +G  D+   + E + E  I+
Sbjct: 200 YVCNGFLEFSVELLASMRIRGFEP-DMVTWNTVMDAYCRMGLCDEAWEIFEQIKEPNII 257


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/772 (30%), Positives = 394/772 (51%), Gaps = 92/772 (11%)

Query: 19   LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFD 78
            L +D  LC R+I +Y+ C +                             DD  F   +FD
Sbjct: 471  LRNDDVLCTRIITMYAMCGS----------------------------PDDSRF---VFD 499

Query: 79   EMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKASTALLDVE 137
             +  +N+  WN +IS+  RN L ++ L  + +M S    +P H T   V KA   + DV 
Sbjct: 500  ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG 559

Query: 138  HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
             G   HGLV+K GL ++++V NAL+S Y   G+   A+ +F+ M E N V++ +M+   +
Sbjct: 560  IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 619

Query: 198  KTDRVVEALEMFRLMIRK----AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
                  E+  +   M+ +    A   D  +L +VL VCARE                 R 
Sbjct: 620  DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE-----------------RE 662

Query: 254  VH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
            +  G+ VH   +KL  + +L L+N+L+DMY+K G + +A++IF     ++VVSWN M+ G
Sbjct: 663  IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 722

Query: 313  YGQKYQSTKAIELLQRMKSCG--FEPDEVTSINMLVAC---------------------- 348
            +  +  +    ++L++M + G   + DEVT +N +  C                      
Sbjct: 723  FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 782

Query: 349  -------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                          + G +   + +F  + S +V+SWNA++  ++QS + + ++    +M
Sbjct: 783  YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 842

Query: 396  QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
            +  G+ PD  T+  +LS+C+ +  L  GK+VH   ++     D +V   ++ +Y  C   
Sbjct: 843  KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 902

Query: 456  ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
               + +F  + +  +V WN++I G   N     A   F+QM    +     S   V  +C
Sbjct: 903  CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 962

Query: 516  AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
            + L S   GR+ HA   K    +D F+  +LI+MY K G I  + + F+ +  K+T +WN
Sbjct: 963  SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 1022

Query: 576  EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
             MI GY  +G   EA++L+++M  +G  PDD+TF+ +LTAC+HSGL+  G+   + M+  
Sbjct: 1023 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 1082

Query: 636  HGVEPILDHYTCMIDCLGRAGHFHEA-EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
             G++P L HY C+ID LGRAG   +A  ++ +EM  + D  IW+ LLSSCR+H N+ + +
Sbjct: 1083 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 1142

Query: 695  RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + A +LF L+P+    Y LL+N+Y+ LG+W+D+R VR+ M+E  + KD   S
Sbjct: 1143 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCS 1194



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 164/639 (25%), Positives = 286/639 (44%), Gaps = 65/639 (10%)

Query: 109  NKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI-KIGLDKNIYVANALLSLYAK 167
            ++ S++ F+     L  + +AS    D+E GR+ H LV     L  +  +   ++++YA 
Sbjct: 428  DESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAM 487

Query: 168  CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
            CG    +  VF+ +   N   + A++S  ++ +   E LE F  MI    S   +     
Sbjct: 488  CGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI----STTDLLPDHF 543

Query: 228  LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
               C  + C   SDV             G  VH L +K G   D+ + N+L+  Y  +G 
Sbjct: 544  TYPCVIKACAGMSDVGI-----------GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 592

Query: 288  MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM----KSCGFEPDEVTSIN 343
            +  A  +F  +PER++VSWN MI  +     S ++  LL  M        F PD  T + 
Sbjct: 593  VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 652

Query: 344  MLVACVRSGDIKTGRE-----------------------------------MFDSMPSPS 368
            +L  C R  +I  G+                                    +F    + +
Sbjct: 653  VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 712

Query: 369  VSSWNAMLSSYSQSENHKEAIKLFREMQFRG--VKPDRTTLAIILSSCAAMGILESGKQV 426
            V SWN M+  +S   +      + R+M   G  VK D  T+   +  C     L S K++
Sbjct: 713  VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 772

Query: 427  HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS-- 484
            H  SLK     +  VA+  +  Y+KC     A+RVFH I    +  WN++I G + ++  
Sbjct: 773  HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 832

Query: 485  -LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
             L ++A +   QM+ + + P  F+  ++LS+C+KL S   G++VH  I ++    D+FV 
Sbjct: 833  RLSLDAHL---QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 889

Query: 544  SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
             +++ +Y  CG++   +  FD M  K+ V+WN +I GY QNG+ D A+ +++ M+  G++
Sbjct: 890  LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 949

Query: 604  PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
               I+ + +  ACS    + +G E  ++  L H +E        +ID   + G   ++  
Sbjct: 950  LCGISMMPVFGACSLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 1008

Query: 664  LIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
            + + +  K     W  ++    +H   + A +  EE+ R
Sbjct: 1009 VFNGLKEKST-ASWNAMIMGYGIHGLAKEAIKLFEEMQR 1046



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 133/546 (24%), Positives = 244/546 (44%), Gaps = 80/546 (14%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            G  +H  +++ GL +D F+ N L+  Y        A  LFD MP +++ SWN+++     
Sbjct: 561  GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 620

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            +   E ++ L  EM E N                            +  F+P   TL +V
Sbjct: 621  NGFSEESFLLLGEMMEEN---------------------------GDGAFMPDVATLVTV 653

Query: 127  FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                    ++  G+  HG  +K+ LDK + + NAL+ +Y+KCG   +A  +F+  +  N 
Sbjct: 654  LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 713

Query: 187  VTFTAMMSGLAKTDRVVEALEMFRLMIRKA--VSIDSVSLSSVLGVCAREGCGVESDVFA 244
            V++  M+ G +         ++ R M+     V  D V++ + + VC  E        F 
Sbjct: 714  VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES-------FL 766

Query: 245  QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
             S          +++HC ++K  F  +  ++N+ +  YAK G +  A+ +F  +  ++V 
Sbjct: 767  PSL---------KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 817

Query: 305  SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----- 359
            SWN +I G+ Q      +++   +MK  G  PD  T  ++L AC +   ++ G+E     
Sbjct: 818  SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 877

Query: 360  ------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          +FD+M   S+ SWN +++ Y Q+     A+
Sbjct: 878  IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 937

Query: 390  KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
             +FR+M   G++    ++  +  +C+ +  L  G++ HA +LK     D ++A  LI +Y
Sbjct: 938  GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 997

Query: 450  SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            +K      + +VF+ + E     WN+MI G  ++ L  EA   F++M++    P   +F 
Sbjct: 998  AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 1057

Query: 510  TVLSSC 515
             VL++C
Sbjct: 1058 GVLTAC 1063



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 208/441 (47%), Gaps = 30/441 (6%)

Query: 58   NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            NA +++  K   L +A ++F  +  + V SWN LI    ++     +L  + +M   G +
Sbjct: 789  NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 848

Query: 118  PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
            P   T+ S+  A + L  +  G+  HG +I+  L+++++V  ++LSLY  CG       +
Sbjct: 849  PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 908

Query: 178  FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
            F+ M + + V++  +++G  +      AL +FR M+   + +  +S+  V G C+     
Sbjct: 909  FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL---- 964

Query: 238  VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                              G++ H   +K   E D  ++ SL+DMYAKNG +  +  +F+ 
Sbjct: 965  ------------LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNG 1012

Query: 298  LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
            L E+S  SWN MI GYG    + +AI+L + M+  G  PD++T + +L AC  SG I  G
Sbjct: 1013 LKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 1072

Query: 358  REMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                D M S     P++  +  ++    ++    +A+++  E      + D      +LS
Sbjct: 1073 LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE--EADVGIWKSLLS 1130

Query: 413  SCAAMGILESGKQVHAASLK-TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
            SC     LE G++V A   +      +NYV   L  +Y+   + E   +V  R+ E+ + 
Sbjct: 1131 SCRIHQNLEMGEKVAAKLFELEPEKPENYVL--LSNLYAGLGKWEDVRKVRQRMNEMSL- 1187

Query: 472  CWNSMIAGLSLNSLDIEAFMF 492
                  AG S   L+ + F F
Sbjct: 1188 ---RKDAGCSWIELNRKVFSF 1205



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 193/457 (42%), Gaps = 90/457 (19%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            GK +H   ++  L  +  L N L+++YSKC    +AQ +F    +K++ SWN ++     
Sbjct: 666  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 725

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKA--LSVYNKMS---NEGFVPTHI 121
              D    + +  +M               +  G + KA  +++ N +    +E F+P+  
Sbjct: 726  EGDTHGTFDVLRQM---------------LAGGEDVKADEVTILNAVPVCFHESFLPSL- 769

Query: 122  TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
                              +  H   +K     N  VANA ++ YAKCG   +A  VF  +
Sbjct: 770  ------------------KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 811

Query: 182  SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
                  ++ A++ G A+++    +L+    M    +  DS ++ S+L  C+         
Sbjct: 812  RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS--------- 862

Query: 242  VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                   K      G++VH   I+   E DL +  S+L +Y   G++ + + +F  + ++
Sbjct: 863  -------KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 915

Query: 302  SVVSWNVMIAGYGQKYQSTKAIELLQRM-----KSCG----------------------- 333
            S+VSWN +I GY Q     +A+ + ++M     + CG                       
Sbjct: 916  SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 975

Query: 334  -------FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                    E D   + +++    ++G I    ++F+ +   S +SWNAM+  Y      K
Sbjct: 976  AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 1035

Query: 387  EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            EAIKLF EMQ  G  PD  T   +L++C   G++  G
Sbjct: 1036 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 1072



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 136/307 (44%), Gaps = 21/307 (6%)

Query: 11   HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQH----LFDKMPHKDIYSWNAILSAQCK 66
            H  +  +GL  D+F    L+   SK  +    +     +      +D++ + ++LS    
Sbjct: 839  HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 898

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +L     LFD M ++++VSWN +I+  ++NG  ++AL V+ +M   G     I++  V
Sbjct: 899  CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 958

Query: 127  FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            F A + L  +  GR  H   +K  L+ + ++A +L+ +YAK G    +  VF  + E + 
Sbjct: 959  FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 1018

Query: 187  VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
             ++ AM+ G        EA+++F  M R   + D ++   VL  C   G   E   +   
Sbjct: 1019 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ 1078

Query: 247  DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA-EVIFSNLPERSVVS 305
                           +    G + +L     ++DM  + G +D A  V+   + E + V 
Sbjct: 1079 ---------------MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 1123

Query: 306  -WNVMIA 311
             W  +++
Sbjct: 1124 IWKSLLS 1130


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 243/775 (31%), Positives = 387/775 (49%), Gaps = 103/775 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H  + + GL +   + N LI LYS+C                            C 
Sbjct: 217 GEVIHGLLEKLGLGEACAVANALIALYSRCG---------------------------CM 249

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D    A ++FD M  R+ +SWN+ IS    NG  ++A+ +++KM +EG   + +T+ SV
Sbjct: 250 ED----AMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSV 305

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNI---------YVANALLSLYAKCGWTKHAVPV 177
             A   L     G+  HG  +K GL  ++          + + L+ +Y KCG    A  V
Sbjct: 306 LPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRV 365

Query: 178 FEEM-SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV-----C 231
           F+ M S+ N   +  +M G AK     E+L +F  M    ++ D  +LS +L       C
Sbjct: 366 FDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSC 425

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           AR+G                        H   +KLGF     + N+L+  YAK+  +D+A
Sbjct: 426 ARDGL---------------------VAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNA 464

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
            ++F  +P +  +SWN +I+G      +++AIEL  RM   G E D  T +++L AC RS
Sbjct: 465 VLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARS 524

Query: 352 G-----------DIKTG------------------------REMFDSMPSPSVSSWNAML 376
                        +KTG                         ++F +M   +V SW AM+
Sbjct: 525 HYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMI 584

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           +SY+++    +   L +EM   G+KPD   +  +L   A    L+ GK VH  +++    
Sbjct: 585 TSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGME 644

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
               VA+ L+ +Y  C+  E A  VF  +   DI+ WN++I G S N+   E+F  F  M
Sbjct: 645 KLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDM 704

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
              +  P   +   +L + A +SS  +GR++HA   + G++ D +  +AL++MY KCG +
Sbjct: 705 LL-QFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGAL 763

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             AR  FD +  KN ++W  MI GY  +G G +AV L++ M  SGV+PD  +F AIL AC
Sbjct: 764 LVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYAC 823

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
            HSGL   G + FN+M+ ++ +EP L HYTC++D L   G+  EA   I+ MP + D  I
Sbjct: 824 CHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSI 883

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
           W  LL  CR+H +V+LA++ A+ +F+L+P+N+  Y LLANIY+   RW+ ++ ++
Sbjct: 884 WVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLK 938



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 188/675 (27%), Positives = 322/675 (47%), Gaps = 70/675 (10%)

Query: 63  AQCKSDDLEFAYKLFDEMPER--NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           A  K  DL  A  +FDEMP R  +V  W +L+SA  + G  ++ +S++ +M   G  P  
Sbjct: 139 AYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDA 198

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
             ++ V K   +L  +  G   HGL+ K+GL +   VANAL++LY++CG  + A+ VF+ 
Sbjct: 199 HAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDS 258

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M   + +++ + +SG         A+++F  M  +   I SV++ SVL  CA  G     
Sbjct: 259 MHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELG----- 313

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH---------LSNSLLDMYAKNGDMDSA 291
                        + G+ VH  ++K G   DL          L + L+ MY K GDM SA
Sbjct: 314 -----------FELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSA 362

Query: 292 EVIFSNLPERSVVS-WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML----- 345
             +F  +P +  V  WN+++ GY +  +  +++ L ++M   G  PDE     +L     
Sbjct: 363 RRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITC 422

Query: 346 VACVRSGDIKTGR------------------------------EMFDSMPSPSVSSWNAM 375
           ++C R G +  G                                +FD MP     SWN++
Sbjct: 423 LSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSV 482

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +S  + +  + EAI+LF  M  +G + D TTL  +L +CA       G+ VH  S+KT  
Sbjct: 483 ISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGL 542

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
             +  +A+ L+ +YS C       ++F  + + ++V W +MI   +   L  +     ++
Sbjct: 543 IGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQE 602

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M  + + P  F+  +VL   A   S  QG+ VH    ++G    + V +AL+EMY  C +
Sbjct: 603 MVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRN 662

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  AR  FD +  K+ ++WN +I GY++N + +E+  L+ DM+    KP+ +T   IL A
Sbjct: 663 MEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPA 721

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYT--CMIDCLGRAGHFHEAEMLIDEMPCKDD 673
            +    ++ G EI ++  L  G   + D YT   ++D   + G    A +L D +  K +
Sbjct: 722 VASISSLERGREI-HAYALRRGF--LEDSYTSNALVDMYVKCGALLVARVLFDRLT-KKN 777

Query: 674 PVIWEVLLSSCRLHA 688
            + W ++++   +H 
Sbjct: 778 LISWTIMIAGYGMHG 792



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 217/464 (46%), Gaps = 57/464 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H + ++ GL  +T L N L+++YS C++ HS   +F  M  K++ SW A       
Sbjct: 530 GRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTA------- 582

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I++  R GL +K   +  +M  +G  P    + SV
Sbjct: 583 ------------------------MITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSV 618

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                    ++ G+  HG  I+ G++K + VANAL+ +Y  C   + A  VF+ ++  + 
Sbjct: 619 LHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDI 678

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++  ++ G ++ +   E+  +F  M+ +    ++V+++ +L   A             S
Sbjct: 679 ISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVA-------------S 724

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            +   R   G+++H   ++ GF  D + SN+L+DMY K G +  A V+F  L +++++SW
Sbjct: 725 ISSLER---GREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISW 781

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
            +MIAGYG       A+ L ++M+  G EPD  +   +L AC  SG    G + F++M  
Sbjct: 782 TIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRK 841

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +  ++   S + N KEA +    M    ++PD +    +L  C     ++
Sbjct: 842 EYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMP---IEPDSSIWVSLLHGCRIHRDVK 898

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
             ++V     K       Y    L  IY++ +R E  +++ ++I
Sbjct: 899 LAEKVADRVFKLEPENTGYYVL-LANIYAEAERWEAVKKLKNKI 941



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 200/458 (43%), Gaps = 51/458 (11%)

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPER--SVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L   L+  Y K GD+  A ++F  +P R   V  W  +++ Y +     + + L ++M+ 
Sbjct: 132 LGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQC 191

Query: 332 CGFEPDEVTSINMLVACV------------------------------------RSGDIK 355
           CG  PD   +++ ++ C+                                    R G ++
Sbjct: 192 CGVSPD-AHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCME 250

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
              ++FDSM +    SWN+ +S Y  +  H  A+ LF +M   G +    T+  +L +CA
Sbjct: 251 DAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACA 310

Query: 416 AMGILESGKQVHAASLKTA---------SHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
            +G    GK VH  S+K+          S ID  + S L+ +Y KC     A RVF  +P
Sbjct: 311 ELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMP 370

Query: 467 -ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
            + ++  WN ++ G +  +   E+ + F+QM +  + P + + + +L     LS +  G 
Sbjct: 371 SKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGL 430

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
             H  + K G+     V +ALI  Y K   I  A   FD M  ++T++WN +I G   NG
Sbjct: 431 VAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNG 490

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
              EA+ L+  M   G + D  T +++L AC+ S    VG  + +   +  G+       
Sbjct: 491 LNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVG-RVVHGYSVKTGLIGETSLA 549

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             ++D       +H    +   M  K + V W  +++S
Sbjct: 550 NALLDMYSNCSDWHSTNQIFRNMAQK-NVVSWTAMITS 586



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 149/330 (45%), Gaps = 18/330 (5%)

Query: 365 PSPSVSS-WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           PS  +SS  N  +    Q+ +   A++L       GV+    +   ++  C     LE+ 
Sbjct: 58  PSRVLSSDVNLRIQRLCQAGDLAAALRLLGSDGGVGVR----SYCAVVQLCGEERSLEAA 113

Query: 424 KQVHA-ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE--LDIVCWNSMIAGL 480
           ++ HA     T   I + +   L+  Y KC     A  VF  +P    D+  W S+++  
Sbjct: 114 RRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAY 173

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           +      E    F+QM+   + P   + + VL   A L S  +G  +H  +EK G     
Sbjct: 174 AKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEAC 233

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            V +ALI +Y +CG +  A Q FD MH ++ ++WN  I GY  NG+ D AV L+  M + 
Sbjct: 234 AVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSE 293

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID-CLG------ 653
           G +   +T +++L AC+  G   VG ++ +   +  G+   L+     ID  LG      
Sbjct: 294 GTEISSVTVLSVLPACAELGFELVG-KVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFM 352

Query: 654 --RAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
             + G    A  + D MP K +  +W +++
Sbjct: 353 YVKCGDMGSARRVFDAMPSKGNVHVWNLIM 382


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 234/771 (30%), Positives = 382/771 (49%), Gaps = 85/771 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+   GK +H H+       D +L N LI +YSKC +                       
Sbjct: 65  KSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGS----------------------- 101

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   +E A  +F  M +++VVSWN +IS    +G  ++A+ ++ +M  EG  P   
Sbjct: 102 --------IEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQN 153

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           +  S+  A    + +E G + H  + K G + ++ V+ AL+++Y KCG  + A  VF EM
Sbjct: 154 SFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEM 213

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E N V++TAM+SG  +     EA  +F+ +IR     + VS +S+LG C          
Sbjct: 214 RERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACT--------- 264

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
               + N   +   G ++H    + G E ++ + N+L+ MYA+ G + +A  +F NL   
Sbjct: 265 ----NPNDLEQ---GLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSP 317

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
           + VSWN MIAGYG+ +   +A  L + M+  GF+PD  T  ++L  C    D+  G+E+ 
Sbjct: 318 NRVSWNAMIAGYGEGFME-EAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELH 376

Query: 361 ----------------------------------FDSMPSPSVSSWNAMLSSYSQSENHK 386
                                             F+ MP  +  SWNA ++   +  + K
Sbjct: 377 SQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEK 436

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA ++F++M+   V PD  T   +L+SC +    E G+ +H    +     +N VA+ LI
Sbjct: 437 EAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALI 496

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y +C +   A  VF+RI   D+  WN+MIA    +  +  AF  F + +       ++
Sbjct: 497 SMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKY 556

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +F  VL + A L     GR++H  +EK G   DI + + LI+MY KCG +  A   F  +
Sbjct: 557 TFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNV 616

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             K+ V WN M+  Y  + +G +A++L++ M   GV PD  T+ ++L AC+  G ++ G 
Sbjct: 617 QEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGK 676

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           + F++   +  +E    HY CM+  LGRA    EAE  I+E+  + D ++WE LL +CR+
Sbjct: 677 K-FHTQLKEAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRI 735

Query: 687 HANVRLAKRAAEELFRLDPKNS-APYSLLANIYSSLGRWDDLRAVRELMSE 736
           H NV LA+ A E L  +  ++S A    L NIY++ GRW+D+  ++  M E
Sbjct: 736 HHNVGLAETAVEHLLDVKAQSSPAVCEQLMNIYAAAGRWEDVSVIKATMRE 786



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 10/306 (3%)

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
           RGV+ +    A  L  C     L  GK+VH          D Y+ + LI +YSKC   E 
Sbjct: 45  RGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIED 104

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A  VF  + + D+V WN+MI+G +L+    EA   F QM++  + P Q SF ++LS+C  
Sbjct: 105 ANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQT 164

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
                 G Q+H+ I K GY +D+ V +ALI MYCKCG +  AR+ F+ M  +N V+W  M
Sbjct: 165 PIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAM 224

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I GY Q+G   EA  L++ +I SG +P+ ++F +IL AC++   ++ G+++   ++   G
Sbjct: 225 ISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIK-QAG 283

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           +E  +     +I    R G    A  + D +    + V W  +++           +   
Sbjct: 284 LEQEVLVGNALISMYARCGSLANARQVFDNLR-SPNRVSWNAMIAG--------YGEGFM 334

Query: 698 EELFRL 703
           EE FRL
Sbjct: 335 EEAFRL 340



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 131/334 (39%), Gaps = 73/334 (21%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H  + + GL  D  +   LI++YSKC +                           
Sbjct: 573 AGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGS--------------------------- 605

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               L  AY +F  + E++VV WN +++A   +   + AL ++ +M  EG  P   T  S
Sbjct: 606 ----LRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTS 661

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   L  +EHG++ H  + +  ++ +      +++   +    K A    EE+S  +
Sbjct: 662 VLNACARLGAIEHGKKFHTQLKEAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSES 721

Query: 186 EVTFTAMM---------SGLAKTDRVVEAL------------EMFRLMIRKAVSIDSVSL 224
           +      +          GLA+T   VE L            E    +   A   + VS+
Sbjct: 722 DALMWESLLVACRIHHNVGLAET--AVEHLLDVKAQSSPAVCEQLMNIYAAAGRWEDVSV 779

Query: 225 SSVL----GVCAREGCGVE--SDVFAQSDNKFSRNVHGQ-QVHCLTIKL---GFEADLHL 274
                   G+ A + C +E  S+      N FS  +  + ++  L  K+   GF  D H 
Sbjct: 780 IKATMREAGLLAPKSCTIEVNSEFHTFMTNHFSPQIGVEDKIEELVWKMMDKGFLLDPH- 838

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                  YA N D    E +FS+ PE   V++ +
Sbjct: 839 -------YAPN-DSREKERLFSHCPELLAVAYGL 864


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/764 (29%), Positives = 383/764 (50%), Gaps = 86/764 (11%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+   NA + A  K   +E A ++FD++  R+VV+WN+L +  V  G  ++ L+V+ KM 
Sbjct: 74  DVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMG 133

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
                   +T++S+    + L D++ G+  HG V++ G+ ++++V++A ++ YAKC   +
Sbjct: 134 LNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVR 193

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF+ M   + VT+ ++ S         + L +FR M+   V  D V++S +L  C 
Sbjct: 194 EAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSAC- 252

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                  SD+    D K  + +HG       +K G   ++ +SN+L+++Y     +  A+
Sbjct: 253 -------SDL---QDLKSGKAIHG-----FALKHGMVENVFVSNALVNLYESCLCVREAQ 297

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  +P R+V++WN + + Y       K + + + M   G +PD +   ++L AC +  
Sbjct: 298 AVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLK 357

Query: 353 DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
           D+K+G+ +                                   FD MP  +V +WN++ S
Sbjct: 358 DLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSS 417

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y      ++ + +FREM   GVKPD  T+  IL +C+ +  L+SGK +H  +++     
Sbjct: 418 CYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVE 477

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D +V + L+ +Y+KC     A+ VF  IP  ++  WN ++     N    +    F QM 
Sbjct: 478 DVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMN 537

Query: 498 QNEMYPTQFSFATVLSSCAK----------------------------------LSSSFQ 523
           ++E+   + +++ V+  C K                                  LS   +
Sbjct: 538 RDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLR 597

Query: 524 -GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G+++H  + +     D+   +AL++MY KCG +  +R  FDMM  K+  +WN MI    
Sbjct: 598 MGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANG 657

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
            +G G EA+ L++ M+ S VKPD  TF  +L+ACSHS LV+ GV+IFNSM  DH VEP  
Sbjct: 658 MHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEA 717

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           +HYTC++D   RAG   EA   I  MP +   + W+  L+ CR++ NV LAK +A++LF 
Sbjct: 718 EHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFE 777

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +DP  SA Y  L NI  +   W +   +R+LM E  I K P  S
Sbjct: 778 IDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCS 821



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 160/647 (24%), Positives = 290/647 (44%), Gaps = 119/647 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +GK +H  ++R+G+ +D F+ +  +  Y+KC     AQ +FD MPH+D+ +WN+      
Sbjct: 159 SGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNS------ 212

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    L S  V  G  +K L+V+ +M  +G  P  +T++ 
Sbjct: 213 -------------------------LSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSC 247

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A + L D++ G+  HG  +K G+ +N++V+NAL++LY  C   + A  VF+ M   N
Sbjct: 248 ILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRN 307

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +T+ ++ S         + L +FR M    V  D +++SS+L  C++            
Sbjct: 308 VITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQ-----------L 356

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D K  + +HG       +K G   D+ +  +L+++YA    +  A+ +F  +P R+VV+
Sbjct: 357 KDLKSGKTIHG-----FAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVT 411

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
           WN + + Y       K + + + M   G +PD VT +++L AC    D+K+G+ +     
Sbjct: 412 WNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAV 471

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENH----- 385
                                         FD +P   V+SWN +L++Y  ++ +     
Sbjct: 472 RHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLY 531

Query: 386 ------------------------------KEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
                                         +EA+++FR+MQ  G KPD TT+  IL +C+
Sbjct: 532 MFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACS 591

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
               L  GK++H    +     D    + L+ +Y+KC    L+  VF  +P  D+  WN+
Sbjct: 592 LSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNT 651

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MI    ++    EA   F++M  + + P   +F  VLS+C+      +G Q+   + +D 
Sbjct: 652 MIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDH 711

Query: 536 YVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT-VTWNEMIHG 580
            V  +    + ++++Y + G +  A  F   M  + T + W   + G
Sbjct: 712 LVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAG 758



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 162/676 (23%), Positives = 298/676 (44%), Gaps = 88/676 (13%)

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNI 155
           + +GL  +A+ +Y      G  P      +V KA  A  D    ++ H    + G+  ++
Sbjct: 16  IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
            + NA +  Y KC   + A  VF+++   + VT+ ++ +         + L +FR M   
Sbjct: 76  SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLN 135

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            V  + +++SS+L      GC    D+ +           G+++H   ++ G   D+ +S
Sbjct: 136 KVKANPLTVSSIL-----PGCSDLQDLKS-----------GKEIHGFVVRHGMVEDVFVS 179

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           ++ ++ YAK   +  A+ +F  +P R VV+WN + + Y       K + + + M   G +
Sbjct: 180 SAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVK 239

Query: 336 PDEVTSINMLVACVRSGDIKTGREM----------------------------------- 360
           PD VT   +L AC    D+K+G+ +                                   
Sbjct: 240 PDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAV 299

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FD MP  +V +WN++ S Y      ++ + +FREM   GVKPD   ++ IL +C+ +  L
Sbjct: 300 FDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDL 359

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
           +SGK +H  ++K     D +V + L+ +Y+ C     A+ VF  +P  ++V WNS+ +  
Sbjct: 360 KSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCY 419

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
                  +    F++M  N + P   +  ++L +C+ L     G+ +H    + G V D+
Sbjct: 420 VNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDV 479

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGK------------------------------- 569
           FV +AL+ +Y KC  +  A+  FD++  +                               
Sbjct: 480 FVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRD 539

Query: 570 ----NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
               + +TW+ +I G  +N   +EA+ +++ M   G KPD+ T  +IL ACS S  + +G
Sbjct: 540 EVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMG 599

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            EI +     H  +  L     ++D   + G    +  + D MP K D   W  ++ +  
Sbjct: 600 KEI-HCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIK-DVFSWNTMIFANG 657

Query: 686 LHANVRLAKRAAEELF 701
           +H N + A    E++ 
Sbjct: 658 MHGNGKEALSLFEKML 673



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 170/353 (48%), Gaps = 30/353 (8%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +GK++H   +R+G+ +D F+CN L+ LY+KC     AQ +FD +PH+++ SWN IL+A  
Sbjct: 462 SGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYF 521

Query: 66  KSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
            + + E    +F +M    V    ++W+ +I   V+N   E+A+ ++ KM   GF P   
Sbjct: 522 TNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDET 581

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ S+ +A +    +  G+  H  V +   D ++   NAL+ +YAKCG    +  VF+ M
Sbjct: 582 TIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMM 641

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              +  ++  M+          EAL +F  M+   V  DS + + VL  C+     VE  
Sbjct: 642 PIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSML-VEEG 700

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-E 300
           V  Q  N  SR+      H +      E +      ++D+Y++ G ++ A      +P E
Sbjct: 701 V--QIFNSMSRD------HLV------EPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPME 746

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE------VTSINMLVA 347
            + ++W   +AG     +  K +EL +      FE D       VT  N+LV 
Sbjct: 747 PTAIAWKAFLAG----CRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVT 795


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/612 (35%), Positives = 330/612 (53%), Gaps = 70/612 (11%)

Query: 147 IKIGLDKNIYVANALLSLYAKCGW---TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
           IKIGL    Y  + LL       +     +A+ VF+ + EPN++++  M+ G A +   +
Sbjct: 1   IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
            AL ++  MI   +S +S +   +   CA+     E                G+Q+H   
Sbjct: 61  SALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQE----------------GKQIHAQI 104

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
           +K G   DLH+  SL+ MYA+NG ++ A  +F     R VVS+  MI GY  +       
Sbjct: 105 LKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASR------- 157

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                       G++   ++MFD +P   V SWNAM+S Y++  
Sbjct: 158 ----------------------------GNMDKAQKMFDEIPIKDVVSWNAMISGYAEIG 189

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY--- 440
            +KEA++LF EM    VKPD +T+A +LS+C   G +E G+Q+H       S IDN+   
Sbjct: 190 RYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIH-------SWIDNHGFG 242

Query: 441 ----VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
               + + LI +YSKC   E A  +F  +   D++ WN++I G +  +   EA + F++M
Sbjct: 243 SNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEM 302

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD--GYVNDIFVGSALIEMYCKCG 554
            +    P   +  ++L +CA L +   GR +H  I+K   G + +  + ++LI+MY KCG
Sbjct: 303 LKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCG 362

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
           +I  A Q FD +  K+  + N MI G+A +G  D A  L   M   G++PDDITFV +L+
Sbjct: 363 NIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLS 422

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           ACSH+GL D+G +IF SM LD+ +EP L+HY CMID LGR+G F EAE LI+ M  + D 
Sbjct: 423 ACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDG 482

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           VIW  LL +C++H N+ L +  A++L +++PKN   Y LL+NIY++  RWDD+  VR L+
Sbjct: 483 VIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLL 542

Query: 735 SENCIVKDPAYS 746
           ++  + K P  S
Sbjct: 543 NDKGLKKVPGCS 554



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 235/468 (50%), Gaps = 29/468 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   GK +HA IL+ GL  D  +   LI +Y++      A  +FD   H+D+ S+ A++
Sbjct: 92  KAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMI 151

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +      +++ A K+FDE+P ++VVSWN +IS     G  ++AL ++N+M      P   
Sbjct: 152 TGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDES 211

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+A+V    T   +VE GR+ H  +   G   N+ + NAL+ LY+KCG  + A  +FE +
Sbjct: 212 TMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGL 271

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + +++  ++ G A  +   EAL +F+ M++   + + V++ S+L  CA  G     D
Sbjct: 272 QYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGA---ID 328

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIK--LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           +             G+ +H    K   G   +  L  SL+DMYAK G++++A  +F  + 
Sbjct: 329 I-------------GRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTIL 375

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            +S+ S N MI G+    ++  A +LL RMK  G EPD++T + +L AC  +G    GR+
Sbjct: 376 NKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRK 435

Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +F SM       P +  +  M+    +S   KEA +L   M    ++PD      +L +C
Sbjct: 436 IFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMT---MEPDGVIWGSLLKAC 492

Query: 415 AAMGILESGKQVHAASLKT-ASHIDNYVASGLIGIYSKCQRNELAERV 461
                LE G+ +    +K    +  +YV   L  IY+   R +   RV
Sbjct: 493 KIHKNLELGELIAQKLMKIEPKNPGSYVL--LSNIYATSARWDDVARV 538



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 126/511 (24%), Positives = 227/511 (44%), Gaps = 93/511 (18%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           L +A  +F  + E N +SWN +I     +     AL++Y  M + G  P   T   +FK+
Sbjct: 28  LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
                  + G++ H  ++K GL  +++V  +L+S+YA+ G  + A  VF+  S  + V++
Sbjct: 88  CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147

Query: 190 T-------------------------------AMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           T                               AM+SG A+  R  EALE+F  M++  V 
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNS 277
            D  ++++VL  C   G                 NV  G+Q+H      GF ++L L N+
Sbjct: 208 PDESTMATVLSTCTHSG-----------------NVELGRQIHSWIDNHGFGSNLKLVNA 250

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L+D+Y+K G+M+ A  +F  L  + V+SWN +I GY       +A+ + Q M   G  P+
Sbjct: 251 LIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPN 310

Query: 338 EVTSINMLVACVRSGDIKTGR-------------------------------------EM 360
           +VT +++L AC   G I  GR                                     ++
Sbjct: 311 DVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQV 370

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FD++ + S+SS NAM+  ++       A  L   M+  G++PD  T   +LS+C+  G+ 
Sbjct: 371 FDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLS 430

Query: 421 ESGKQVHAA---SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSM 476
           + G+++  +     +    +++Y    +I +  +    + AE + + +  E D V W S+
Sbjct: 431 DLGRKIFKSMTLDYRIEPKLEHY--GCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSL 488

Query: 477 IAGLSLN-SLDIEAFMFFKQMRQNEMYPTQF 506
           +    ++ +L++   +  K M+     P  +
Sbjct: 489 LKACKIHKNLELGELIAQKLMKIEPKNPGSY 519


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 251/774 (32%), Positives = 379/774 (48%), Gaps = 82/774 (10%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + +H  I+  G+ D   L +R++ LY  C       +LF                     
Sbjct: 64  RQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLF--------------------- 102

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
               F  +L + +P      WN +I  L   G  + AL  Y KM      P   T   V 
Sbjct: 103 ----FGLELCNALP------WNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVI 152

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA   L +V      H     +G   +++V +AL+ LYA  G+   A  VF+E+ + + +
Sbjct: 153 KACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTI 212

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            +  M+ G  K+     A+  F  M      ++SV+ + +L +CA  G            
Sbjct: 213 LWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRG------------ 260

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
            KF     G QVH L I  GFE D  ++N+L+ MY+K G++  A  +F+ +P+   V+WN
Sbjct: 261 -KFCL---GTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWN 316

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG--------------- 352
            +IAGY Q   + +A  L   M S G +PD VT  + L + + SG               
Sbjct: 317 GLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRH 376

Query: 353 --------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                               D++  R++F       V+   AM+S Y     + +AI  F
Sbjct: 377 RVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTF 436

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           R +   G+ P+  T+A +L +CAA+  L+ GK++H   LK        V S +  +Y+KC
Sbjct: 437 RWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKC 496

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
            R +LA   F R+ E D +CWNSMI+  S N     A   F+QM  +       S ++ L
Sbjct: 497 GRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSAL 556

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           SS A L + + G+++H  + ++ + +D FV SALI+MY KCG +  AR  F++M GKN V
Sbjct: 557 SSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEV 616

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +WN +I  Y  +G   E + L+ +M+ +GV PD +TF+ I++AC H+GLV  G+  F+ M
Sbjct: 617 SWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCM 676

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
             ++G+   ++HY CM+D  GRAG  HEA   I  MP   D  +W  LL +CRLH NV L
Sbjct: 677 TREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVEL 736

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           AK A+  L  LDPKNS  Y LL+N+++  G W  +  VR LM E  + K P YS
Sbjct: 737 AKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYS 790



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 152/535 (28%), Positives = 245/535 (45%), Gaps = 53/535 (9%)

Query: 106 SVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
           +V +K   + ++ T   L S+F+A +    V+  R+ H  +I  G+     +++ +L LY
Sbjct: 32  NVMSKPETQDYLTTQ--LESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLY 89

Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
             CG       +F  +   N + +  M+ GL        AL  +  M+   VS D  +  
Sbjct: 90  VLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFP 149

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
            V+  C     G+ +                  VH     LGF  DL + ++L+ +YA N
Sbjct: 150 YVIKACG----GLNNVPLCMV------------VHNTARSLGFHVDLFVGSALIKLYADN 193

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL------------------- 326
           G +  A  +F  LP+R  + WNVM+ GY +      A+                      
Sbjct: 194 GYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCIL 253

Query: 327 ----QRMKSC------------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVS 370
                R K C            GFE D   +  ++    + G++   R++F++MP     
Sbjct: 254 SICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTV 313

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           +WN +++ Y Q+    EA  LF  M   GVKPD  T A  L S    G L   K+VH+  
Sbjct: 314 TWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYI 373

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
           ++     D Y+ S LI IY K    E+A ++F +   +D+    +MI+G  L+ L+I+A 
Sbjct: 374 VRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAI 433

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             F+ + Q  M P   + A+VL +CA L++   G+++H  I K    N + VGSA+ +MY
Sbjct: 434 NTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMY 493

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
            KCG +  A +FF  M   +++ WN MI  ++QNG  + AV L++ M  SG K D
Sbjct: 494 AKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFD 548



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +++RN    DTF+ + LI++YSKC     A+ +F+ M  K+  SWN+I++A   
Sbjct: 568 GKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGN 627

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE 114
                    LF EM    V    V++  +ISA    GL  + +  ++ M+ E
Sbjct: 628 HGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTRE 679


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/709 (31%), Positives = 378/709 (53%), Gaps = 64/709 (9%)

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           W +L+ + VR+ L  +A+  Y  M   G  P +    ++ KA   L D++ G++ H  V 
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 148 KIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           K G    ++ VAN L++LY KCG       VF+ +SE N+V++ +++S L   ++   AL
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
           E FR M+ + V   S +L SV   C+          F   +      + G+QVH   ++ 
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSN---------FPMPEGL----LMGKQVHAYGLRK 227

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           G E +  + N+L+ MY K G + S++V+  +   R +V+WN +++   Q  Q  +A+E L
Sbjct: 228 G-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYL 286

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-------------------------- 360
           + M   G EPD  T  ++L AC     ++TG+E+                          
Sbjct: 287 REMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 346

Query: 361 ----------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLAI 409
                     FD M    +  WNAM++ Y+Q+E  +EA+ LF EM+   G+  + TT+A 
Sbjct: 347 CKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAG 406

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           ++ +C   G     + +H   +K     D +V + L+ +YS+  + ++A+R+F ++ + D
Sbjct: 407 VVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRD 466

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-----------MYPTQFSFATVLSSCAKL 518
           +V WN++I G   +    +A +   +M+  E           + P   +  T+L SCA L
Sbjct: 467 LVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAAL 526

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           S+  +G+++HA   K+    D+ VGSAL++MY KCG +  +R+ FD +  +N +TWN ++
Sbjct: 527 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIV 586

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
             Y  +G   +A+ + + M+  GVKP+++TF+++  ACSHSG+V+ G++IF +M+ D+GV
Sbjct: 587 MAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGV 646

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK-DDPVIWEVLLSSCRLHANVRLAKRAA 697
           EP  DHY C++D LGRAG   EA  LI+ +P   D    W  LL +CR+H N+ + + AA
Sbjct: 647 EPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAA 706

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + L +L+P  ++ Y LLANIYSS G W     VR  M    + K+P  S
Sbjct: 707 QNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCS 755



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 154/615 (25%), Positives = 273/615 (44%), Gaps = 105/615 (17%)

Query: 7   GKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK +HAH+ + G   D   + N L+ LY KC                             
Sbjct: 112 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG---------------------------- 143

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
              D    YK+FD + ERN VSWN+LIS+L      E AL  +  M +E   P+  TL S
Sbjct: 144 ---DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVS 200

Query: 126 VFKASTALLDVE---HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           V  A +     E    G++ H   ++ G + N ++ N L+++Y K G    +  +     
Sbjct: 201 VALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFE 259

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + VT+  ++S L + ++ +EALE  R M+ + V  D  ++SSVL  C           
Sbjct: 260 GRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPAC----------- 308

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
              S  +  R   G+++H   +K G  + +  + ++L+DMY     + S   +F  + +R
Sbjct: 309 ---SHLEMLRT--GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDR 363

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRS--------- 351
            +  WN MI GY Q     +A+ L   M +S G   +  T   ++ ACVRS         
Sbjct: 364 KIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAI 423

Query: 352 --------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                     G I   + +F  M    + +WN +++ Y  SE H
Sbjct: 424 HGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERH 483

Query: 386 KEAIKLFREMQFR-----------GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           ++A+ +  +MQ              +KP+  TL  IL SCAA+  L  GK++HA ++K  
Sbjct: 484 EDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 543

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V S L+ +Y+KC   +++ +VF +IP  +++ WN ++    ++    +A    +
Sbjct: 544 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLR 603

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV---NDIFVGSALIEMYC 551
            M    + P + +F +V ++C+      +G ++   ++KD  V   +D +  + ++++  
Sbjct: 604 MMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHY--ACVVDLLG 661

Query: 552 KCGDIYGARQFFDMM 566
           + G +  A Q  +++
Sbjct: 662 RAGRVKEAYQLINLI 676



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 196/405 (48%), Gaps = 65/405 (16%)

Query: 6   AGKLLHAHILRNGLFDD-TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
            GK LHA+ L+NG  D+ +F+ + L+++Y  C    S   +FD M               
Sbjct: 316 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGM--------------- 360

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITL 123
                       FD    R +  WN +I+   +N  +E+AL ++ +M  + G +    T+
Sbjct: 361 ------------FD----RKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTM 404

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A V  A             HG V+K GLD++ +V NAL+ +Y++ G    A  +F +M +
Sbjct: 405 AGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMED 464

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMF---RLMIRKA------VSI--DSVSLSSVLGVCA 232
            + VT+  +++G   ++R  +AL M    +++ RKA      VS+  +S++L ++L  CA
Sbjct: 465 RDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCA 524

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                             S    G+++H   IK     D+ + ++L+DMYAK G +  + 
Sbjct: 525 ----------------ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 568

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  +P R+V++WNV++  YG    S  AI++L+ M   G +P+EVT I++  AC  SG
Sbjct: 569 KVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSG 628

Query: 353 DIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLF 392
            +  G ++F +M       PS   +  ++    ++   KEA +L 
Sbjct: 629 MVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLI 673



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/491 (22%), Positives = 201/491 (40%), Gaps = 77/491 (15%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H  +++ GL  D F+ N L+++YS+      A+ +F KM  +D+ +WN I++    S+ 
Sbjct: 423 IHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSER 482

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
            E A  +  +M                   LE KA    +++S     P  ITL ++  +
Sbjct: 483 HEDALLMLHKM-----------------QILERKASERASRVS---LKPNSITLMTILPS 522

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
             AL  +  G+  H   IK  L  ++ V +AL+ +YAKCG  + +  VF+++   N +T+
Sbjct: 523 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITW 582

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDN 248
             ++          +A++M R+M+ + V  + V+  SV   C+  G   E   +F     
Sbjct: 583 NVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKK 642

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD-----------------MDSA 291
            +          C+   LG    +  +  L+++  +N D                 ++  
Sbjct: 643 DYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIG 702

Query: 292 EVIFSNLP--ERSVVSWNVMIAG-YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
           E+   NL   E +V S  V++A  Y       KA E+ + MK+ G   +   S       
Sbjct: 703 EIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCS------W 756

Query: 349 VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK-LFREMQFRGVKPDRTTL 407
           +  GD               V  + A  SS+ QSE  +  ++ L+  M+  G  PD    
Sbjct: 757 IEHGD--------------EVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPD---- 798

Query: 408 AIILSSCAAMGILESGKQV----HAASLKTASHIDNYVASGLIGIYSK---CQRNELAER 460
               +SC    + E  K++    H+  L  A  I N     +I +      C    LA +
Sbjct: 799 ----TSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATK 854

Query: 461 VFHRIPELDIV 471
              ++ + +I+
Sbjct: 855 FISKVVDREII 865


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/717 (32%), Positives = 362/717 (50%), Gaps = 53/717 (7%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++  L+ A  LF  +      +WN +I      G    AL  Y KM   G  P   T   
Sbjct: 4   RTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPY 63

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA   L  V+ G+  H  V  +GL ++++V ++L+ LYA+ G    A  +F+ + + +
Sbjct: 64  VVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKD 123

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +  M++G  K      A+++F  M    +  +SV+ + VL VCA E         A 
Sbjct: 124 SVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASE---------AM 174

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D        G Q+H + +  G E D  ++N+LL MY+K   + +A  +F  LP+  +VS
Sbjct: 175 LD-------LGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVS 227

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           WN +I+GY Q     +A  L + M S G +PD +T  + L  CV                
Sbjct: 228 WNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFL-PCVNELLSLKHCKEIHGYI 286

Query: 350 --------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               +  D++  ++      S        M+S Y  +  +KEA+
Sbjct: 287 IRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEAL 346

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           + FR +    +KP   T + I  + A +  L  GK++H + +KT      +V S ++ +Y
Sbjct: 347 EAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMY 406

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC R +LA RVF+RI E D +CWNSMI   S N    EA   F+QM          S +
Sbjct: 407 AKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSIS 466

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
             LS+CA L +   G+++H  + K    +D++  S+LI+MY KCG++  +R+ FD M  K
Sbjct: 467 GALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEK 526

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           N V+WN +I  Y  +G   E + L+ +M+ +G++PD +TF+ I++AC H+G VD G+  +
Sbjct: 527 NEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYY 586

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           + M  ++G+   ++HY C+ D  GRAG  HEA   I+ MP   D  +W  LL +C +H N
Sbjct: 587 HLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGN 646

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           V LA+ A++ LF LDP NS  Y LLAN+ +  G+W  +  VR +M E  + K P YS
Sbjct: 647 VELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYS 703



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/598 (24%), Positives = 270/598 (45%), Gaps = 87/598 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H  +   GL +D F+ + LI+LY++  +   AQ+LF                    
Sbjct: 77  GKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLF-------------------- 116

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                      D +P+++ V WN +++  V+NG    A+ ++ +M +    P  +T A V
Sbjct: 117 -----------DNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACV 165

Query: 127 FK--ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
               AS A+LD+  G + HG+ +  GL+ +  VAN LL++Y+KC   + A  +F+ + + 
Sbjct: 166 LSVCASEAMLDL--GTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQS 223

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++  ++SG  +   + EA  +FR MI   +  DS++ +S L  C  E   ++     
Sbjct: 224 DLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFL-PCVNELLSLK----- 277

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                     H +++H   I+     D+ L ++L+D+Y K  D++ A+           V
Sbjct: 278 ----------HCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTV 327

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
               MI+GY    ++ +A+E  + +     +P  VT  ++  A      +  G+E+    
Sbjct: 328 VCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSI 387

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          F+ +       WN+M++S SQ+    EAI
Sbjct: 388 IKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAI 447

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LFR+M   G + D  +++  LS+CA +  L  GK++H   +K     D Y  S LI +Y
Sbjct: 448 NLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMY 507

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC     + RVF R+ E + V WNS+I+    +    E    F +M +N + P   +F 
Sbjct: 508 AKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFL 567

Query: 510 TVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
            ++S+C       +G R  H   E+ G    +   + + +M+ + G ++ A +  + M
Sbjct: 568 GIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSM 625



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 209/445 (46%), Gaps = 49/445 (11%)

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MY + G +  A+ +F  L      +WN MI G+    Q   A+    +M   G  PD+ T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 341 SINMLVACVRSGDIKTGR-----------------------------------EMFDSMP 365
              ++ AC     +K G+                                    +FD++P
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
                 WN ML+ Y ++ +   AIK+F EM+   +KP+  T A +LS CA+  +L+ G Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +H  ++     +D+ VA+ L+ +YSKCQ  + A ++F  +P+ D+V WN +I+G   N L
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             EA   F+ M    + P   +FA+ L    +L S    +++H  I +   V D+F+ SA
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           LI++Y KC D+  A++        +TV    MI GY  NG   EA+  ++ ++   +KP 
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSM---QLD---HGVEPILDHYTCMIDCLGRAGHFH 659
            +TF +I  A +    +++G E+  S+   +LD   H    ILD Y        + G   
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYA-------KCGRLD 413

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSC 684
            A  + + +  K D + W  +++SC
Sbjct: 414 LACRVFNRITEK-DAICWNSMITSC 437



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 194/419 (46%), Gaps = 55/419 (13%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H +I+R+ +  D FL + LI++Y KC +   AQ        K++          C+S
Sbjct: 280 KEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQ--------KNL----------CQS 321

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
              +              V    +IS  V NG  ++AL  +  +  E   PT +T +S+F
Sbjct: 322 SSFD-------------TVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIF 368

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A   L  +  G+  HG +IK  LD+  +V +A+L +YAKCG    A  VF  ++E + +
Sbjct: 369 PAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAI 428

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            + +M++  ++  R  EA+ +FR M  +    D VS+S  L  CA               
Sbjct: 429 CWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACA--------------- 473

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                  +G+++H L IK    +DL+  +SL+DMYAK G+++ +  +F  + E++ VSWN
Sbjct: 474 -NLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWN 532

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS- 366
            +I+ YG      + + L   M   G +PD VT + ++ AC  +G +  G   +  M   
Sbjct: 533 SIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEE 592

Query: 367 ---PS-VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
              P+ +  +  +   + ++    EA +    M F    PD      +L +C   G +E
Sbjct: 593 YGIPARMEHYACVADMFGRAGRLHEAFETINSMPF---PPDAGVWGTLLGACHIHGNVE 648


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/657 (33%), Positives = 349/657 (53%), Gaps = 52/657 (7%)

Query: 125  SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            SV +       +E G+R H ++I  G+  +  +   L+ +Y  CG       +F+++   
Sbjct: 374  SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433

Query: 185  NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
                +  +MS  AK     E++ +F+ M +  V  +  + + VL   A  G   E     
Sbjct: 434  KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC---- 489

Query: 245  QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                        ++VH   +KLGF ++  + NSL+  Y K G ++SA  +F  L E  VV
Sbjct: 490  ------------KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVV 537

Query: 305  SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------ 358
            SWN MI G      S   +E+  +M   G E D  T +++LVA    G++  GR      
Sbjct: 538  SWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFG 597

Query: 359  -----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                         E+F  M   ++ SW + +++Y +   + +AI
Sbjct: 598  VKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAI 657

Query: 390  KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
             LF EMQ +GV+PD  T+  I+ +CA    L+ G+ VH+  +K     +  V + LI +Y
Sbjct: 658  GLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMY 717

Query: 450  SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            +KC   E A  VF +IP  DIV WN+MI G S NSL  EA   F  M Q +  P   + A
Sbjct: 718  AKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMA 776

Query: 510  TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
             VL +CA L++  +GR++H  I + GY +D+ V  AL++MY KCG +  A+  FDM+  K
Sbjct: 777  CVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKK 836

Query: 570  NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
            + ++W  MI GY  +G+G+EA+  + +M  +G++PD+ +F  IL ACSHSGL++ G + F
Sbjct: 837  DLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFF 896

Query: 630  NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
            NSM+ + GVEP L+HY C++D L R G+  +A   I+ MP K D  IW VLLS CR+H +
Sbjct: 897  NSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHD 956

Query: 690  VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            V+LA++ AE +F L+P N+  Y +LAN+Y+   +W++++ +R+ M +    ++P  S
Sbjct: 957  VKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCS 1013



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 168/617 (27%), Positives = 289/617 (46%), Gaps = 85/617 (13%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           KK+   GK +H+ I+ NG+  D  L  +L+ +Y  C +    + +FDK+ +  ++ WN +
Sbjct: 382 KKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLL 441

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +S   K  +                                 +++S++ KM   G V   
Sbjct: 442 MSEYAKIGNF-------------------------------RESVSLFKKMQKLGVVGNC 470

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T   V K   AL  V+  +R HG V+K+G   N  V N+L++ Y K G  + A  +F+E
Sbjct: 471 YTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDE 530

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           +SEP+ V++ +M++G          LE+F  M+   V +D  +L SVL   A  G     
Sbjct: 531 LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIG----- 585

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                 +    R +HG       +K  F  ++  SN+LLDMY+K G+++ A  +F  + +
Sbjct: 586 ------NLSLGRALHG-----FGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD 634

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD--EVTSINMLVAC---------- 348
            ++VSW   IA Y ++   + AI L   M+S G  PD   VTSI    AC          
Sbjct: 635 TTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV 694

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G ++  R +F  +P   + SWN M+  YSQ+   
Sbjct: 695 HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLP 754

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            EA++LF +MQ +  KPD  T+A +L +CA +  L+ G+++H   L+     D +VA  L
Sbjct: 755 NEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACAL 813

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC    LA+ +F  IP+ D++ W  MIAG  ++    EA   F +MR   + P +
Sbjct: 814 VDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDE 873

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            SF+ +L++C+      +G +    +  + G    +   + ++++  + G++  A +F +
Sbjct: 874 SSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIE 933

Query: 565 MMHGK-NTVTWNEMIHG 580
            M  K +T  W  ++ G
Sbjct: 934 SMPIKPDTTIWGVLLSG 950



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 199/413 (48%), Gaps = 56/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH   ++    ++    N L+++YSKC N + A  +F KM    I SW + ++A  +
Sbjct: 590 GRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVR 649

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A  LFDE                               M ++G  P   T+ S+
Sbjct: 650 EGLYSDAIGLFDE-------------------------------MQSKGVRPDIYTVTSI 678

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      ++ GR  H  VIK G+  N+ V NAL+++YAKCG  + A  VF ++   + 
Sbjct: 679 VHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDI 738

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M+ G ++     EALE+F L ++K    D ++++ VL  CA           A  
Sbjct: 739 VSWNTMIGGYSQNSLPNEALELF-LDMQKQFKPDDITMACVLPACAG---------LAAL 788

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D        G+++H   ++ G+ +DLH++ +L+DMYAK G +  A+++F  +P++ ++SW
Sbjct: 789 DK-------GREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISW 841

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
            VMIAGYG      +AI     M+  G EPDE +   +L AC  SG +  G + F+SM +
Sbjct: 842 TVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRN 901

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                P +  +  ++   ++  N  +A K    M    +KPD T   ++LS C
Sbjct: 902 ECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMP---IKPDTTIWGVLLSGC 951



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/398 (23%), Positives = 169/398 (42%), Gaps = 80/398 (20%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            G+ +H+++++NG+  +  + N LI +Y+KC +   A+ +F K+P KDI SWN        
Sbjct: 691  GRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNT------- 743

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    +I    +N L  +AL ++  M  + F P  IT+A V
Sbjct: 744  ------------------------MIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACV 778

Query: 127  FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              A   L  ++ GR  HG +++ G   +++VA AL+ +YAKCG    A  +F+ + + + 
Sbjct: 779  LPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDL 838

Query: 187  VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            +++T M++G        EA+  F  M    +  D  S S +L  C+  G   E   F  S
Sbjct: 839  ISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNS 898

Query: 247  DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS- 305
                 RN           + G E  L     ++D+ A+ G++  A     ++P +   + 
Sbjct: 899  ----MRN-----------ECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTI 943

Query: 306  WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
            W V+++G  + +   K  E                              K    +F+  P
Sbjct: 944  WGVLLSGC-RIHHDVKLAE------------------------------KVAEHIFELEP 972

Query: 366  SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
              +   +  + + Y+++E  +E  KL + MQ RG K +
Sbjct: 973  D-NTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQN 1009


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 238/730 (32%), Positives = 375/730 (51%), Gaps = 52/730 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           ++Y   A+L        +  A +LF EMPERNVVSW  L+ AL  NG  E+AL  Y +M 
Sbjct: 78  NVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMR 137

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            +G        A+V     +L +   G +    VI  GL   + VAN+L++++   G   
Sbjct: 138 RDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVH 197

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +F+ M E + +++ AM+S  +      +   +F  M    +  D+ +L S++ VCA
Sbjct: 198 DAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 257

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                        S + FS   HG  +H L ++   ++ + + N+L++MY+  G +  AE
Sbjct: 258 -------------SSDHFS---HGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAE 301

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F N+  R ++SWN MI+ Y Q   ST A++ L ++      P+ +T  + L AC   G
Sbjct: 302 FLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPG 361

Query: 353 DIKTGR-----------------------------------EMFDSMPSPSVSSWNAMLS 377
            +  G+                                   ++F SMP+  + S+N ++ 
Sbjct: 362 ALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIG 421

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES-GKQVHAASLKTASH 436
            Y+  E+  +A+++F  M+  G+KP+  T+  I  S A+   L + G+ +HA  ++T   
Sbjct: 422 GYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFL 481

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D YVA+ LI +Y+KC   E +  +F+ I   +IV WN++IA         EA   F  M
Sbjct: 482 SDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDM 541

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           +       +   A  LSSCA L+S  +G Q+H    K G  +D +V +A ++MY KCG +
Sbjct: 542 QHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKM 601

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
               Q       +    WN +I GYA+ GY  EA   +K M+A+G KPD +TFVA+L+AC
Sbjct: 602 DEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSAC 661

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH+GLVD G++ +NSM    GV P + H  C++D LGR G F EAE  I+EMP   + +I
Sbjct: 662 SHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLI 721

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W  LLSS R H N+ + ++ A++L  LDP + + Y LL+N+Y++  RW D+  +R  M  
Sbjct: 722 WRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKT 781

Query: 737 NCIVKDPAYS 746
             I K PA S
Sbjct: 782 ININKRPACS 791



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 182/677 (26%), Positives = 297/677 (43%), Gaps = 88/677 (12%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEH- 138
           M +R   +W   +S  VR G +  A  +   M   G   +   LAS+  A       E  
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 139 --GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
             G   H L  + GL  N+Y+  ALL LY   G    A  +F EM E N V++TA+M  L
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           +    + EAL  +R M R  V  ++ + ++V+ +C                      V G
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCG----------------SLENEVPG 164

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
            QV    I  G +  + ++NSL+ M+   G +  AE +F  + E   +SWN MI+ Y  +
Sbjct: 165 LQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQ 224

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------------------------- 351
              +K   +   M+  G  PD  T  +++  C  S                         
Sbjct: 225 GICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVI 284

Query: 352 ----------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                     G +     +F +M    + SWN M+SSY Q+ N  +A+K   ++      
Sbjct: 285 NALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNES 344

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P+  T +  L +C++ G L  GK VHA  L+ +   +  V + LI +Y KC   E AE+V
Sbjct: 345 PNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKV 404

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F  +P  DIV +N +I G ++     +A   F  MR   + P   +   +  S A  +  
Sbjct: 405 FQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDL 464

Query: 522 FQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              GR +HA I + G+++D +V ++LI MY KCG++  +   F+ +  KN V+WN +I  
Sbjct: 465 HNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAA 524

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC----------------------SH 618
             Q G+G+EA++L+ DM  +G K D +     L++C                      S 
Sbjct: 525 NVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSD 584

Query: 619 SGLVDVGVEIFNSM-QLDHGVEPILDH-------YTCMIDCLGRAGHFHEAEMLIDEMPC 670
           S +V+  ++++    ++D  ++ + D        +  +I    + G+F EAE    +M  
Sbjct: 585 SYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVA 644

Query: 671 ---KDDPVIWEVLLSSC 684
              K D V +  LLS+C
Sbjct: 645 TGRKPDYVTFVALLSAC 661



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 252/551 (45%), Gaps = 89/551 (16%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G  + + ++ +GL +   + N LI ++      H A+ LFD+M   D  SWNA     
Sbjct: 162 VPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNA----- 216

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +IS     G+  K   V++ M + G  P   TL 
Sbjct: 217 --------------------------MISMYSHQGICSKCFLVFSDMRHHGLRPDATTLC 250

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+     +     HG   H L ++  LD ++ V NAL+++Y+  G    A  +F  MS  
Sbjct: 251 SLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRR 310

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + +++  M+S   +     +AL+    +     S + ++ SS LG C+  G  ++     
Sbjct: 311 DLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALID----- 365

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+ VH + ++L  + +L + NSL+ MY K   M+ AE +F ++P   +V
Sbjct: 366 -----------GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIV 414

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN--------------------- 343
           S+NV+I GY      TKA+++   M+S G +P+ +T IN                     
Sbjct: 415 SYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAY 474

Query: 344 ---------------MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                          ++    + G++++   +F+S+ + ++ SWNA++++  Q  + +EA
Sbjct: 475 IIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEA 534

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           +KLF +MQ  G K DR  LA  LSSCA++  LE G Q+H   +K+    D+YV +  + +
Sbjct: 535 LKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDM 594

Query: 449 YSKCQRNELAERVFHRIPELDI---VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           Y KC +    + +   +P+  I    CWN++I+G +      EA   FKQM      P  
Sbjct: 595 YGKCGK---MDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDY 651

Query: 506 FSFATVLSSCA 516
            +F  +LS+C+
Sbjct: 652 VTFVALLSACS 662



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 199/430 (46%), Gaps = 56/430 (13%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + GK++HA +L+  L  +  + N LI +Y KCN+   A+ +F  MP  DI S+N ++ 
Sbjct: 362 ALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIG 421

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                          A++ +G   KA+ V++ M + G  P +IT
Sbjct: 422 GY-----------------------------AVLEDG--TKAMQVFSWMRSAGIKPNYIT 450

Query: 123 LASVFKASTALLDV-EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           + ++  +  +  D+  +GR  H  +I+ G   + YVAN+L+++YAKCG  + +  +F  +
Sbjct: 451 MINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSI 510

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           +  N V++ A+++   +     EAL++F  M      +D V L+  L  CA         
Sbjct: 511 TNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCA--------- 561

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    +    G Q+H L +K G ++D ++ N+ +DMY K G MD    +  +   R
Sbjct: 562 -------SLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIR 614

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
               WN +I+GY +     +A E  ++M + G +PD VT + +L AC  +G +  G + +
Sbjct: 615 PQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYY 674

Query: 362 DSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           +SM      SP +     ++    +     EA K   EM    V P+      +LSS   
Sbjct: 675 NSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMP---VLPNDLIWRSLLSSSRT 731

Query: 417 MGILESGKQV 426
              LE G++ 
Sbjct: 732 HKNLEIGRKT 741



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 169/353 (47%), Gaps = 8/353 (2%)

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES- 422
           M   + S+W   +S   +      A ++ R M+ RGV      LA ++++C   G  E  
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 423 --GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
             G  +HA + +     + Y+ + L+ +Y        A+R+F  +PE ++V W +++  L
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           S N    EA   ++QMR++ +     +FATV+S C  L +   G QV +Q+   G  N +
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQV 180

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            V ++LI M+   G ++ A + FD M   +T++WN MI  Y+  G   +   ++ DM   
Sbjct: 181 SVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH 240

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G++PD  T  ++++ C+ S     G  I +S+ L   ++  +     +++    AG   +
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGI-HSLCLRSSLDSSVTVINALVNMYSAAGKLSD 299

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           AE L   M  + D + W  ++SS   + N   A +   +LF     N +P  L
Sbjct: 300 AEFLFWNMS-RRDLISWNTMISSYVQNCNSTDALKTLGQLFH---TNESPNHL 348


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 238/730 (32%), Positives = 375/730 (51%), Gaps = 52/730 (7%)

Query: 53   DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
            ++Y   A+L        +  A +LF EMPERNVVSW  L+ AL  NG  E+AL  Y +M 
Sbjct: 380  NVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMR 439

Query: 113  NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             +G        A+V     +L +   G +    VI  GL   + VAN+L++++   G   
Sbjct: 440  RDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVH 499

Query: 173  HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
             A  +F+ M E + +++ AM+S  +      +   +F  M    +  D+ +L S++ VCA
Sbjct: 500  DAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 559

Query: 233  REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                         S + FS   HG  +H L ++   ++ + + N+L++MY+  G +  AE
Sbjct: 560  -------------SSDHFS---HGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAE 603

Query: 293  VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
             +F N+  R ++SWN MI+ Y Q   ST A++ L ++      P+ +T  + L AC   G
Sbjct: 604  FLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPG 663

Query: 353  DIKTGR-----------------------------------EMFDSMPSPSVSSWNAMLS 377
             +  G+                                   ++F SMP+  + S+N ++ 
Sbjct: 664  ALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIG 723

Query: 378  SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES-GKQVHAASLKTASH 436
             Y+  E+  +A+++F  M+  G+KP+  T+  I  S A+   L + G+ +HA  ++T   
Sbjct: 724  GYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFL 783

Query: 437  IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
             D YVA+ LI +Y+KC   E +  +F+ I   +IV WN++IA         EA   F  M
Sbjct: 784  SDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDM 843

Query: 497  RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
            +       +   A  LSSCA L+S  +G Q+H    K G  +D +V +A ++MY KCG +
Sbjct: 844  QHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKM 903

Query: 557  YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
                Q       +    WN +I GYA+ GY  EA   +K M+A+G KPD +TFVA+L+AC
Sbjct: 904  DEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSAC 963

Query: 617  SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
            SH+GLVD G++ +NSM    GV P + H  C++D LGR G F EAE  I+EMP   + +I
Sbjct: 964  SHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLI 1023

Query: 677  WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
            W  LLSS R H N+ + ++ A++L  LDP + + Y LL+N+Y++  RW D+  +R  M  
Sbjct: 1024 WRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKT 1083

Query: 737  NCIVKDPAYS 746
              I K PA S
Sbjct: 1084 ININKRPACS 1093



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 187/681 (27%), Positives = 301/681 (44%), Gaps = 88/681 (12%)

Query: 76  LFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD 135
           LFDEM +R   +W   +S  VR G   KA  +   M   G   +   LAS+  A      
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358

Query: 136 VEH---GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
            E    G   H L  + GL  N+Y+  ALL LY   G    A  +F EM E N V++TA+
Sbjct: 359 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTAL 418

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           M  L+    + EAL  +R M R  V  ++ + ++V+ +C                     
Sbjct: 419 MVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCG----------------SLEN 462

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
            V G QV    I  G +  + ++NSL+ M+   G +  AE +F  + E   +SWN MI+ 
Sbjct: 463 EVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISM 522

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS--------------------- 351
           Y  +   +K   +   M+  G  PD  T  +++  C  S                     
Sbjct: 523 YSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSS 582

Query: 352 --------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                         G +     +F +M    + SWN M+SSY Q+ N  +A+K   ++  
Sbjct: 583 VTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFH 642

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
               P+  T +  L +C++ G L  GK VHA  L+ +   +  V + LI +Y KC   E 
Sbjct: 643 TNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMED 702

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           AE+VF  +P  DIV +N +I G ++     +A   F  MR   + P   +   +  S A 
Sbjct: 703 AEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFAS 762

Query: 518 LSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
            +     GR +HA I + G+++D +V ++LI MY KCG++  +   F+ +  KN V+WN 
Sbjct: 763 SNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNA 822

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC-------------------- 616
           +I    Q G+G+EA++L+ DM  +G K D +     L++C                    
Sbjct: 823 IIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSG 882

Query: 617 --SHSGLVDVGVEIFNSM-QLDHGVEPILDH-------YTCMIDCLGRAGHFHEAEMLID 666
             S S +V+  ++++    ++D  ++ + D        +  +I    + G+F EAE    
Sbjct: 883 LDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFK 942

Query: 667 EMPC---KDDPVIWEVLLSSC 684
           +M     K D V +  LLS+C
Sbjct: 943 QMVATGRKPDYVTFVALLSAC 963



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 252/551 (45%), Gaps = 89/551 (16%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G  + + ++ +GL +   + N LI ++      H A+ LFD+M   D  SWNA     
Sbjct: 464 VPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNA----- 518

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +IS     G+  K   V++ M + G  P   TL 
Sbjct: 519 --------------------------MISMYSHQGICSKCFLVFSDMRHHGLRPDATTLC 552

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+     +     HG   H L ++  LD ++ V NAL+++Y+  G    A  +F  MS  
Sbjct: 553 SLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRR 612

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + +++  M+S   +     +AL+    +     S + ++ SS LG C+  G  ++     
Sbjct: 613 DLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALID----- 667

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+ VH + ++L  + +L + NSL+ MY K   M+ AE +F ++P   +V
Sbjct: 668 -----------GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIV 716

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN--------------------- 343
           S+NV+I GY      TKA+++   M+S G +P+ +T IN                     
Sbjct: 717 SYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAY 776

Query: 344 ---------------MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                          ++    + G++++   +F+S+ + ++ SWNA++++  Q  + +EA
Sbjct: 777 IIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEA 836

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           +KLF +MQ  G K DR  LA  LSSCA++  LE G Q+H   +K+    D+YV +  + +
Sbjct: 837 LKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDM 896

Query: 449 YSKCQRNELAERVFHRIPELDI---VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           Y KC +    + +   +P+  I    CWN++I+G +      EA   FKQM      P  
Sbjct: 897 YGKCGK---MDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDY 953

Query: 506 FSFATVLSSCA 516
            +F  +LS+C+
Sbjct: 954 VTFVALLSACS 964



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 232/508 (45%), Gaps = 51/508 (10%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAK---CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           HGL +++ L  + +  N LL+ Y +         A+ +F+EM++    T+   +SG  + 
Sbjct: 262 HGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVRC 321

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
               +A EM R M    V +   +L+S++  C R G           D   +    G  +
Sbjct: 322 GSHGKAFEMLRGMREPGVPLSGFALASLVTACERRG----------RDEGIA---CGAAI 368

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H LT + G   ++++  +LL +Y   G +  A+ +F  +PER+VVSW  ++         
Sbjct: 369 HALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYL 428

Query: 320 TKAIELLQRMKS----------------CGFEPDEVTSINMLVACVRSG----------- 352
            +A+   ++M+                 CG   +EV  + +    + SG           
Sbjct: 429 EEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSL 488

Query: 353 --------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
                    +    ++FD M      SWNAM+S YS      +   +F +M+  G++PD 
Sbjct: 489 ITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDA 548

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
           TTL  ++S CA+      G  +H+  L+++      V + L+ +YS   +   AE +F  
Sbjct: 549 TTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWN 608

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           +   D++ WN+MI+    N    +A     Q+      P   +F++ L +C+   +   G
Sbjct: 609 MSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDG 668

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           + VHA + +     ++ VG++LI MY KC  +  A + F  M   + V++N +I GYA  
Sbjct: 669 KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVL 728

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAI 612
             G +A++++  M ++G+KP+ IT + I
Sbjct: 729 EDGTKAMQVFSWMRSAGIKPNYITMINI 756



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 199/430 (46%), Gaps = 56/430 (13%)

Query: 3    AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
            A + GK++HA +L+  L  +  + N LI +Y KCN+   A+ +F  MP  DI S+N ++ 
Sbjct: 664  ALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIG 723

Query: 63   AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                           A++ +G   KA+ V++ M + G  P +IT
Sbjct: 724  GY-----------------------------AVLEDG--TKAMQVFSWMRSAGIKPNYIT 752

Query: 123  LASVFKASTALLDVE-HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            + ++  +  +  D+  +GR  H  +I+ G   + YVAN+L+++YAKCG  + +  +F  +
Sbjct: 753  MINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSI 812

Query: 182  SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            +  N V++ A+++   +     EAL++F  M      +D V L+  L  CA         
Sbjct: 813  TNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCA--------- 863

Query: 242  VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                     +    G Q+H L +K G ++D ++ N+ +DMY K G MD    +  +   R
Sbjct: 864  -------SLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIR 916

Query: 302  SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
                WN +I+GY +     +A E  ++M + G +PD VT + +L AC  +G +  G + +
Sbjct: 917  PQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYY 976

Query: 362  DSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            +SM      SP +     ++    +     EA K   EM    V P+      +LSS   
Sbjct: 977  NSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMP---VLPNDLIWRSLLSSSRT 1033

Query: 417  MGILESGKQV 426
               LE G++ 
Sbjct: 1034 HKNLEIGRKT 1043



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 174/357 (48%), Gaps = 8/357 (2%)

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +FD M   + S+W   +S   +  +H +A ++ R M+  GV      LA ++++C   G 
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358

Query: 420 LES---GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
            E    G  +HA + +     + Y+ + L+ +Y        A+R+F  +PE ++V W ++
Sbjct: 359 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTAL 418

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
           +  LS N    EA   ++QMR++ +     +FATV+S C  L +   G QV +Q+   G 
Sbjct: 419 MVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGL 478

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
            N + V ++LI M+   G ++ A + FD M   +T++WN MI  Y+  G   +   ++ D
Sbjct: 479 QNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSD 538

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M   G++PD  T  ++++ C+ S     G  I +S+ L   ++  +     +++    AG
Sbjct: 539 MRHHGLRPDATTLCSLMSVCASSDHFSHGSGI-HSLCLRSSLDSSVTVINALVNMYSAAG 597

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
              +AE L   M  + D + W  ++SS   + N   A +   +LF     N +P  L
Sbjct: 598 KLSDAEFLFWNMS-RRDLISWNTMISSYVQNCNSTDALKTLGQLFH---TNESPNHL 650



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 16/142 (11%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAK---CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           HGL +++ L  + +  N LL+ Y +         A+ +F+EM++    T+   +SG  + 
Sbjct: 39  HGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVRC 98

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
            R   A EM R M  + V +   +L+S++  C R G           D   +    G  +
Sbjct: 99  GRDGTAFEMLRGMRERGVPLSGFALASLVTACERRG----------RDEGIA---CGAAI 145

Query: 260 HCLTIKLGFEADLHLSNSLLDM 281
           H LT + G   ++++  +LL +
Sbjct: 146 HALTHRAGLMGNVYIGRALLHL 167



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 3/92 (3%)

Query: 76  LFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD 135
           LFDEM +R   +W   +S  VR G +  A  +   M   G   +   LAS+  A      
Sbjct: 76  LFDEMADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGR 135

Query: 136 VEH---GRRCHGLVIKIGLDKNIYVANALLSL 164
            E    G   H L  + GL  N+Y+  ALL L
Sbjct: 136 DEGIACGAAIHALTHRAGLMGNVYIGRALLHL 167


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/702 (30%), Positives = 363/702 (51%), Gaps = 55/702 (7%)

Query: 81  PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           P  NV  WN++I AL  NGL  +AL  Y +M  +   P   T  SV  +   +LD+E G 
Sbjct: 82  PTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGC 141

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
             H   +++G + ++Y+ NAL+ +Y++     +A  VFEEMS  + V++ +++SG     
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNG 201

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              +AL+M+       +  D  ++SSVL  C       E                G  VH
Sbjct: 202 FWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKE----------------GVAVH 245

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            +  K+G   D+ + N LL MY K   +  A  +FS +  +  V+WN MI GY Q  +  
Sbjct: 246 GVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHE 305

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------------- 358
            +++L   M   GF PD ++  + + AC +SGD++ G+                      
Sbjct: 306 ASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILI 364

Query: 359 -------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                        E+FD+       +WN++++ Y+QS  +KE ++ F+ M+    KPD  
Sbjct: 365 DMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSV 423

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T  ++LS  + +  +  G+ +H   +K     +  + + L+ +Y+KC   +   +VF  +
Sbjct: 424 TFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483

Query: 466 PELDIVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
              DI+ WN++IA  S++  D    F    +MR   + P + +   +L  C+ L+   QG
Sbjct: 484 SAHDIISWNTVIAS-SVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQG 542

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           +++H  I K G+ +++ +G+ALIEMY KCG +    + F  M  K+ VTW  +I  +   
Sbjct: 543 KEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMY 602

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G G +A++ ++DM  SGV PD + F+A + ACSHSG+V  G+  F+ M+ D+ +EP ++H
Sbjct: 603 GEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEH 662

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y C++D L R+G   +AE  I  MP K D  +W  LLS+CR   N  +A+R ++++  L+
Sbjct: 663 YACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELN 722

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             ++  Y L++NIY++LG+WD ++ VR  M    + K+P  S
Sbjct: 723 SDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSS 764



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 164/627 (26%), Positives = 291/627 (46%), Gaps = 62/627 (9%)

Query: 26  CNRLIELYSKC-NNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERN 84
           C R+++L   C  + H+ +  F+     D+Y  NA++    +  DL+ A  +F+EM  R+
Sbjct: 131 CARILDLELGCIVHEHAMEMGFES----DLYIGNALIDMYSRFVDLDNARYVFEEMSNRD 186

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
            VSWN+LIS    NG  E AL +Y+K    G VP   T++SV  A  +L+ V+ G   HG
Sbjct: 187 SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHG 246

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
           ++ KIG+  ++ + N LLS+Y K    + A  VF +M+  + VT+  M+ G A+  R   
Sbjct: 247 VIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEA 306

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           ++++F  MI   V  D +S++S +  C + G     D+             G+ VH   I
Sbjct: 307 SVKLFMDMIDGFVP-DMLSITSTIRACGQSG-----DLQV-----------GKFVHKYLI 349

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
             GFE D    N L+DMYAK GD+ +A+ +F     +  V+WN +I GY Q     + +E
Sbjct: 350 GSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLE 409

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------------------------- 358
             + MK    +PD VT + +L    +  DI  GR                          
Sbjct: 410 SFKMMK-MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYA 468

Query: 359 ---------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
                    ++F  M +  + SWN +++S    ++     ++  EM+  G+ PD  T+  
Sbjct: 469 KCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLG 528

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           IL  C+ + +   GK++H    K+    +  + + LI +YSKC   E   +VF  + E D
Sbjct: 529 ILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKD 588

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W ++I+   +     +A   F+ M  + + P   +F   + +C+      +G +   
Sbjct: 589 VVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFD 648

Query: 530 QIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMMHGKNTVT-WNEMIHGYAQNGYG 587
           +++ D  +       A ++++  + G +  A +F   M  K   + W  ++      G  
Sbjct: 649 RMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNT 708

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILT 614
           + A R+ K ++   +  DD  +  +++
Sbjct: 709 NIAQRVSKKILE--LNSDDTGYYVLVS 733



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 274/618 (44%), Gaps = 66/618 (10%)

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +S+ K  ++  +    R  H L+I  GL  ++  +  L+S YA+      +V VF  +S 
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 184 PNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-----EGCG 237
            N V  + +++  L       +AL  +  M  K +  D+ +  SV+  CAR      GC 
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGC- 141

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                                VH   +++GFE+DL++ N+L+DMY++  D+D+A  +F  
Sbjct: 142 --------------------IVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEE 181

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR------- 350
           +  R  VSWN +I+GY        A+++  + +  G  PD  T  ++L+AC         
Sbjct: 182 MSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241

Query: 351 ------------SGDIKTG----------------REMFDSMPSPSVSSWNAMLSSYSQS 382
                       +GD+  G                R +F  M      +WN M+  Y+Q 
Sbjct: 242 VAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQL 301

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
             H+ ++KLF +M   G  PD  ++   + +C   G L+ GK VH   + +    D    
Sbjct: 302 GRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + LI +Y+KC     A+ VF      D V WNS+I G + +    E    FK M+  E  
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKM-ERK 419

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +F  +LS  ++L+   QGR +H  + K G+  ++ +G++L+++Y KCG++    + 
Sbjct: 420 PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKV 479

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F  M   + ++WN +I             ++  +M   G+ PD+ T + IL  CS   + 
Sbjct: 480 FSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVR 539

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
             G EI   +    G E  +     +I+   + G       +   M  K D V W  L+S
Sbjct: 540 RQGKEIHGYI-FKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK-DVVTWTALIS 597

Query: 683 SCRLHANVRLAKRAAEEL 700
           +  ++   + A +A +++
Sbjct: 598 AFGMYGEGKKALKAFQDM 615



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 197/440 (44%), Gaps = 56/440 (12%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +H +++ +G   DT  CN LI++Y+KC +  +AQ +FD    KD  +WN+      
Sbjct: 340 VGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNS------ 393

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    LI+   ++G  ++ L  +  M  E   P  +T   
Sbjct: 394 -------------------------LINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVL 427

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +    + L D+  GR  H  VIK G +  + + N+LL +YAKCG     + VF  MS  +
Sbjct: 428 LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHD 487

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++  +++     D      +M   M  + +  D  ++  +L +C+             
Sbjct: 488 IISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSL------------ 535

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +    G+++H    K GFE+++ + N+L++MY+K G +++   +F  + E+ VV+
Sbjct: 536 ----LAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVT 591

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  +I+ +G   +  KA++  Q M+  G  PD V  I  + AC  SG +K G   FD M 
Sbjct: 592 WTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMK 651

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           +     P +  +  ++   ++S    +A +    M    +KPD +    +LS+C A G  
Sbjct: 652 TDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMP---MKPDASLWGALLSACRARGNT 708

Query: 421 ESGKQVHAASLKTASHIDNY 440
              ++V    L+  S    Y
Sbjct: 709 NIAQRVSKKILELNSDDTGY 728


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/702 (30%), Positives = 365/702 (51%), Gaps = 55/702 (7%)

Query: 81  PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           P  NV  WN++I AL  NGL  +AL  Y +M  +   P   T  SV  +   +LD+E G 
Sbjct: 82  PTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGC 141

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
             H   +++G + ++Y+ NAL+ +Y++     +A  VFEEMS  + V++ +++SG     
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNG 201

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              +AL+M+       +  D  ++SSVL  C          + A  +        G  VH
Sbjct: 202 FWEDALDMYHKFRMTGMVPDCFTMSSVLLACG--------SLMAVKE--------GVAVH 245

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            +  K+G   D+ + N LL MY K   +  A  +FS +  +  V+WN MI GY Q  +  
Sbjct: 246 GVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHE 305

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------------- 358
            +++L   M   GF PD ++  + + AC +SGD++ G+                      
Sbjct: 306 ASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILI 364

Query: 359 -------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                        E+FD+       +WN++++ Y+QS  +KE ++ F+ M+    KPD  
Sbjct: 365 DMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSV 423

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T  ++LS  + +  +  G+ +H   +K     +  + + L+ +Y+KC   +   +VF  +
Sbjct: 424 TFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483

Query: 466 PELDIVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
              DI+ WN++IA  S++  D    F    +MR   + P + +   +L  C+ L+   QG
Sbjct: 484 SAHDIISWNTVIAS-SVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQG 542

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           +++H  I K G+ +++ +G+ALIEMY KCG +    + F  M  K+ VTW  +I  +   
Sbjct: 543 KEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMY 602

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G G +A++ ++DM  SGV PD + F+A + ACSHSG+V  G+  F+ M+ D+ +EP ++H
Sbjct: 603 GEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEH 662

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y C++D L R+G   +AE  I  MP K D  +W  LLS+CR   N  +A+R ++++  L+
Sbjct: 663 YACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELN 722

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             ++  Y L++NIY++LG+WD ++ VR  M    + K+P  S
Sbjct: 723 SDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSS 764



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 164/627 (26%), Positives = 291/627 (46%), Gaps = 62/627 (9%)

Query: 26  CNRLIELYSKC-NNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERN 84
           C R+++L   C  + H+ +  F+     D+Y  NA++    +  DL+ A  +F+EM  R+
Sbjct: 131 CARILDLELGCIVHEHAMEMGFES----DLYIGNALIDMYSRFVDLDNARYVFEEMSNRD 186

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
            VSWN+LIS    NG  E AL +Y+K    G VP   T++SV  A  +L+ V+ G   HG
Sbjct: 187 SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHG 246

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
           ++ KIG+  ++ + N LLS+Y K    + A  VF +M+  + VT+  M+ G A+  R   
Sbjct: 247 VIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEA 306

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           ++++F  MI   V  D +S++S +  C + G     D+             G+ VH   I
Sbjct: 307 SVKLFMDMIDGFVP-DMLSITSTIRACGQSG-----DLQV-----------GKFVHKYLI 349

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
             GFE D    N L+DMYAK GD+ +A+ +F     +  V+WN +I GY Q     + +E
Sbjct: 350 GSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLE 409

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------------------------- 358
             + MK    +PD VT + +L    +  DI  GR                          
Sbjct: 410 SFKMMK-MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYA 468

Query: 359 ---------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
                    ++F  M +  + SWN +++S    ++     ++  EM+  G+ PD  T+  
Sbjct: 469 KCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLG 528

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           IL  C+ + +   GK++H    K+    +  + + LI +YSKC   E   +VF  + E D
Sbjct: 529 ILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKD 588

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W ++I+   +     +A   F+ M  + + P   +F   + +C+      +G +   
Sbjct: 589 VVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFD 648

Query: 530 QIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYG 587
           +++ D  +       A ++++  + G +  A +F   M  K +   W  ++      G  
Sbjct: 649 RMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNT 708

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILT 614
           + A R+ K ++   +  DD  +  +++
Sbjct: 709 NIAQRVSKKILE--LNSDDTGYYVLVS 733



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 156/613 (25%), Positives = 277/613 (45%), Gaps = 56/613 (9%)

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +S+ K  ++  +    R  H L+I  GL  ++  +  L+S YA+      +V VF  +S 
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 184 PNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
            N V  + +++  L       +AL  +  M  K +  D+ +  SV+  CAR    ++ ++
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARI---LDLEL 139

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G  VH   +++GFE+DL++ N+L+DMY++  D+D+A  +F  +  R 
Sbjct: 140 -------------GCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRD 186

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR------------ 350
            VSWN +I+GY        A+++  + +  G  PD  T  ++L+AC              
Sbjct: 187 SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHG 246

Query: 351 -------SGDIKTG----------------REMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                  +GD+  G                R +F  M      +WN M+  Y+Q   H+ 
Sbjct: 247 VIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEA 306

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           ++KLF +M   G  PD  ++   + +C   G L+ GK VH   + +    D    + LI 
Sbjct: 307 SVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILID 365

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+KC     A+ VF      D V WNS+I G + +    E    FK M+  E  P   +
Sbjct: 366 MYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKM-ERKPDSVT 424

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           F  +LS  ++L+   QGR +H  + K G+  ++ +G++L+++Y KCG++    + F  M 
Sbjct: 425 FVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS 484

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
             + ++WN +I             ++  +M   G+ PD+ T + IL  CS   +   G E
Sbjct: 485 AHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKE 544

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           I   +    G E  +     +I+   + G       +   M  K D V W  L+S+  ++
Sbjct: 545 IHGYI-FKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK-DVVTWTALISAFGMY 602

Query: 688 ANVRLAKRAAEEL 700
              + A +A +++
Sbjct: 603 GEGKKALKAFQDM 615



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 197/439 (44%), Gaps = 56/439 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +++ +G   DT  CN LI++Y+KC +  +AQ +FD    KD  +WN+       
Sbjct: 341 GKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNS------- 393

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LI+   ++G  ++ L  +  M  E   P  +T   +
Sbjct: 394 ------------------------LINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLL 428

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               + L D+  GR  H  VIK G +  + + N+LL +YAKCG     + VF  MS  + 
Sbjct: 429 LSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDI 488

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++  +++     D      +M   M  + +  D  ++  +L +C+              
Sbjct: 489 ISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSL------------- 535

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+++H    K GFE+++ + N+L++MY+K G +++   +F  + E+ VV+W
Sbjct: 536 ---LAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTW 592

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             +I+ +G   +  KA++  Q M+  G  PD V  I  + AC  SG +K G   FD M +
Sbjct: 593 TALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKT 652

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +  ++   ++S    +A +    M    +KPD +    +LS+C A G   
Sbjct: 653 DYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMP---MKPDASLWGALLSACRARGNTN 709

Query: 422 SGKQVHAASLKTASHIDNY 440
             ++V    L+  S    Y
Sbjct: 710 IAQRVSKKILELNSDDTGY 728


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/730 (30%), Positives = 384/730 (52%), Gaps = 52/730 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y   AIL        +  + K+F+EMP+RNVVSW +L+      G  E+ + +Y  M 
Sbjct: 93  DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 152

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            EG      +++ V  +   L D   GR+  G V+K GL+  + V N+L+S+    G   
Sbjct: 153 GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVD 212

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +A  +F++MSE + +++ ++ +  A+   + E+  +F LM R    ++S ++S++L V  
Sbjct: 213 YANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 272

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                           K+ R +HG     L +K+GF++ + + N+LL MYA  G    A 
Sbjct: 273 H-----------VDHQKWGRGIHG-----LVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 316

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--- 349
           ++F  +P + ++SWN ++A +    +S  A+ LL  M S G   + VT  + L AC    
Sbjct: 317 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 376

Query: 350 --------------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                                           + G++   R +   MP   V +WNA++ 
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 436

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG-ILESGKQVHAASLKTASH 436
            Y++ E+  +A+  F+ M+  GV  +  T+  +LS+C   G +LE GK +HA  +     
Sbjct: 437 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 496

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D +V + LI +Y+KC     ++ +F+ +   +I+ WN+M+A  + +    E      +M
Sbjct: 497 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 556

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R   +   QFSF+  LS+ AKL+   +G+Q+H    K G+ +D F+ +A  +MY KCG+I
Sbjct: 557 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 616

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
               +       ++  +WN +I    ++GY +E    + +M+  G+KP  +TFV++LTAC
Sbjct: 617 GEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 676

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH GLVD G+  ++ +  D G+EP ++H  C+ID LGR+G   EAE  I +MP K + ++
Sbjct: 677 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 736

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W  LL+SC++H N+   ++AAE L +L+P++ + Y L +N++++ GRW+D+  VR+ M  
Sbjct: 737 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGF 796

Query: 737 NCIVKDPAYS 746
             I K  A S
Sbjct: 797 KNIKKKQACS 806



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 187/686 (27%), Positives = 307/686 (44%), Gaps = 94/686 (13%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA--- 129
           A  LFD MP RN VSWN ++S +VR GL  + +  + KM + G  P+   +AS+  A   
Sbjct: 11  ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
           S ++     G + HG V K GL  ++YV+ A+L LY   G    +  VFEEM + N V++
Sbjct: 71  SGSMF--REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSW 128

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           T++M G +      E +++++ M  + V  +  S+S V+  C               D  
Sbjct: 129 TSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCG-----------LLKDES 177

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
             R + GQ      +K G E+ L + NSL+ M    G++D A  IF  + ER  +SWN +
Sbjct: 178 LGRQIIGQ-----VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 232

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML------------------------ 345
            A Y Q     ++  +   M+    E +  T   +L                        
Sbjct: 233 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 292

Query: 346 --VACVRSGDIK----TGRE-----MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
             V CV +  ++     GR      +F  MP+  + SWN++++S+       +A+ L   
Sbjct: 293 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 352

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M   G   +  T    L++C      E G+ +H   + +    +  + + L+ +Y K   
Sbjct: 353 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE 412

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              + RV  ++P  D+V WN++I G + +    +A   F+ MR   +     +  +VLS+
Sbjct: 413 MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 472

Query: 515 CAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           C       + G+ +HA I   G+ +D  V ++LI MY KCGD+  ++  F+ +  +N +T
Sbjct: 473 CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 532

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS-----------HSGLV 622
           WN M+   A +G+G+E ++L   M + GV  D  +F   L+A +           H   V
Sbjct: 533 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 592

Query: 623 DVGVE----IFNSM---------------QLDHGVEPILDHYTCMIDCLGRAGHFHEA-- 661
            +G E    IFN+                 L   V   L  +  +I  LGR G+F E   
Sbjct: 593 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 652

Query: 662 ---EMLIDEMPCKDDPVIWEVLLSSC 684
              EML  EM  K   V +  LL++C
Sbjct: 653 TFHEML--EMGIKPGHVTFVSLLTAC 676



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 231/488 (47%), Gaps = 50/488 (10%)

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y K G  K A  +F+ M   NEV++  MMSG+ +    +E +E FR M    +   S  
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
           ++S++  C R G      +F +          G QVH    K G  +D+++S ++L +Y 
Sbjct: 61  IASLVTACGRSG-----SMFRE----------GVQVHGFVAKSGLLSDVYVSTAILHLYG 105

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK------------- 330
             G +  +  +F  +P+R+VVSW  ++ GY  K +  + I++ + M+             
Sbjct: 106 VYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL 165

Query: 331 ---SCGFEPDEVTSINMLVACVRS-------------------GDIKTGREMFDSMPSPS 368
              SCG   DE     ++   V+S                   G++     +FD M    
Sbjct: 166 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 225

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
             SWN++ ++Y+Q+ + +E+ ++F  M+    + + TT++ +LS    +   + G+ +H 
Sbjct: 226 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 285

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
             +K        V + L+ +Y+   R+  A  VF ++P  D++ WNS++A    +   ++
Sbjct: 286 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 345

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIE 548
           A      M  +       +F + L++C       +GR +H  +   G   +  +G+AL+ 
Sbjct: 346 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 405

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           MY K G++  +R+    M  ++ V WN +I GYA++   D+A+  ++ M   GV  + IT
Sbjct: 406 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 465

Query: 609 FVAILTAC 616
            V++L+AC
Sbjct: 466 VVSVLSAC 473



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 164/339 (48%), Gaps = 15/339 (4%)

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           G +K  R +FD MP  +  SWN M+S   +   + E ++ FR+M   G+KP    +A ++
Sbjct: 6   GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65

Query: 412 SSCAAMG-ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           ++C   G +   G QVH    K+    D YV++ ++ +Y        + +VF  +P+ ++
Sbjct: 66  TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 125

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           V W S++ G S      E    +K MR   +   + S + V+SSC  L     GRQ+  Q
Sbjct: 126 VSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQ 185

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + K G  + + V ++LI M    G++  A   FD M  ++T++WN +   YAQNG+ +E+
Sbjct: 186 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 245

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG--VEPILDHYTCM 648
            R++  M     + +  T   +L+   H      G  I       HG  V+   D   C+
Sbjct: 246 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI-------HGLVVKMGFDSVVCV 298

Query: 649 IDCLGR----AGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            + L R    AG   EA ++  +MP K D + W  L++S
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 3/134 (2%)

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           MY K G +  AR  FD+M  +N V+WN M+ G  + G   E +  ++ M   G+KP    
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 609 FVAILTACSHSG-LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
             +++TAC  SG +   GV++ +      G+   +   T ++   G  G    +  + +E
Sbjct: 61  IASLVTACGRSGSMFREGVQV-HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119

Query: 668 MPCKDDPVIWEVLL 681
           MP + + V W  L+
Sbjct: 120 MPDR-NVVSWTSLM 132


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/615 (34%), Positives = 336/615 (54%), Gaps = 62/615 (10%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH------AVPVFEEMSEPNEVTFTAMM 193
           R  H  +IK GL    Y  + L+     C  + H      A+ VFE + EPN + +  M 
Sbjct: 7   RMIHAQMIKTGLHNTNYALSKLIEF---CILSPHFDGLPYAISVFETIQEPNLLIWNTMF 63

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            G A +   V AL+++  MI   +  +S +   +L  CA+      S  F +        
Sbjct: 64  RGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK------SKAFKE-------- 109

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             GQQ+H   +KLG + DL++  SL+ MY +NG ++ A  +F   P R VVS+  +I GY
Sbjct: 110 --GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGY 167

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
             +                                   G I+  ++MFD +P   V SWN
Sbjct: 168 ASR-----------------------------------GYIENAQKMFDEIPVKDVVSWN 192

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           AM+S Y+++ N+KEA++LF++M    V+PD +T+  ++S+CA  G +E G+QVH+     
Sbjct: 193 AMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDH 252

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               +  + + LI +YSKC   E A  +F  +P  D++ WN++I G +  +L  EA + F
Sbjct: 253 GFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLF 312

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK--DGYVNDIFVGSALIEMYC 551
           ++M ++   P   +  ++L +CA L +   GR +H  I+K   G  N   + ++LI+MY 
Sbjct: 313 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYA 372

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCGDI  A Q F+ +  K+  +WN MI G+A +G  D +  ++  M  +G++PDDITFV 
Sbjct: 373 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVG 432

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +L+ACSHSG++D+G  IF SM  D+ + P L+HY CMID LG +G F EAE +I+ M  +
Sbjct: 433 LLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME 492

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
            D VIW  LL +C++H NV L +  A+ L +++P+N   Y LL+NIY++ GRW+++   R
Sbjct: 493 PDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTR 552

Query: 732 ELMSENCIVKDPAYS 746
            L+++  + K P  S
Sbjct: 553 ALLNDKGMKKVPGCS 567



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 217/430 (50%), Gaps = 26/430 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H H+L+ G   D ++   LI +Y +      A  +FD+ PH+D+ S+ A++
Sbjct: 105 KAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALI 164

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   +E A K+FDE+P ++VVSWN +IS     G  ++AL ++  M      P   
Sbjct: 165 KGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 224

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ +V  A      +E GR+ H  +   G   N+ + NAL+ LY+KCG  + A  +FE +
Sbjct: 225 TMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGL 284

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + +++  ++ G    +   EAL +F+ M+R   + + V++ S+L  CA  G     D
Sbjct: 285 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA---ID 341

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKL--GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           +             G+ +H    K   G      L  SL+DMYAK GD+++A  +F+++ 
Sbjct: 342 I-------------GRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSIL 388

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            +S+ SWN MI G+    ++  + ++  RM+  G EPD++T + +L AC  SG +  GR 
Sbjct: 389 HKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRH 448

Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +F SM      +P +  +  M+     S   KEA ++   M+   ++PD      +L +C
Sbjct: 449 IFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKAC 505

Query: 415 AAMGILESGK 424
              G +E G+
Sbjct: 506 KMHGNVELGE 515



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 221/487 (45%), Gaps = 112/487 (22%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           +++HA +++ GL +  +  ++LIE                            ILS     
Sbjct: 7   RMIHAQMIKTGLHNTNYALSKLIEF--------------------------CILSPHF-- 38

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D L +A  +F+ + E N++ WN +      +     AL +Y  M + G +P   T   + 
Sbjct: 39  DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLL 98

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL----------------------- 164
           K+       + G++ HG V+K+G D ++YV  +L+S+                       
Sbjct: 99  KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVV 158

Query: 165 --------YAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
                   YA  G+ ++A  +F+E+   + V++ AM+SG A+T    EALE+F+ M++  
Sbjct: 159 SYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 218

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  ++ +V+  CA+ G  +E                G+QVH      GF ++L + N
Sbjct: 219 VRPDESTMVTVVSACAQSG-SIEL---------------GRQVHSWIDDHGFGSNLKIVN 262

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D+Y+K G++++A  +F  LP + V+SWN +I GY       +A+ L Q M   G  P
Sbjct: 263 ALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 322

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           ++VT +++L AC                                      + GDI+   +
Sbjct: 323 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQ 382

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F+S+   S+SSWNAM+  ++       +  +F  M+  G++PD  T   +LS+C+  G+
Sbjct: 383 VFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGM 442

Query: 420 LESGKQV 426
           L+ G+ +
Sbjct: 443 LDLGRHI 449



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 145/297 (48%), Gaps = 36/297 (12%)

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIG---IYSKCQRNELAERVFHRIPELDIVCWNS 475
           IL+S + +HA  +KT  H  NY  S LI    +         A  VF  I E +++ WN+
Sbjct: 2   ILQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNT 61

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           M  G +L+S  + A   +  M    + P  ++F  +L SCAK  +  +G+Q+H  + K G
Sbjct: 62  MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG 121

Query: 536 YVNDIFVGSALIEMYCKCGD-------------------------------IYGARQFFD 564
              D++V ++LI MY + G                                I  A++ FD
Sbjct: 122 CDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFD 181

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            +  K+ V+WN MI GYA+ G   EA+ L+KDM+ + V+PD+ T V +++AC+ SG +++
Sbjct: 182 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 241

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           G ++ + +  DHG    L     +ID   + G    A  L + +P K D + W  L+
Sbjct: 242 GRQVHSWID-DHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYK-DVISWNTLI 296


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/730 (30%), Positives = 384/730 (52%), Gaps = 52/730 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y   AIL        +  + K+F+EMP+RNVVSW +L+      G  E+ + +Y  M 
Sbjct: 76  DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 135

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            EG      +++ V  +   L D   GR+  G V+K GL+  + V N+L+S+    G   
Sbjct: 136 GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVD 195

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +A  +F++MSE + +++ ++ +  A+   + E+  +F LM R    ++S ++S++L V  
Sbjct: 196 YANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 255

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                           K+ R +HG     L +K+GF++ + + N+LL MYA  G    A 
Sbjct: 256 H-----------VDHQKWGRGIHG-----LVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--- 349
           ++F  +P + ++SWN ++A +    +S  A+ LL  M S G   + VT  + L AC    
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359

Query: 350 --------------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                                           + G++   R +   MP   V +WNA++ 
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 419

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG-ILESGKQVHAASLKTASH 436
            Y++ E+  +A+  F+ M+  GV  +  T+  +LS+C   G +LE GK +HA  +     
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 479

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D +V + LI +Y+KC     ++ +F+ +   +I+ WN+M+A  + +    E      +M
Sbjct: 480 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R   +   QFSF+  LS+ AKL+   +G+Q+H    K G+ +D F+ +A  +MY KCG+I
Sbjct: 540 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 599

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
               +       ++  +WN +I    ++GY +E    + +M+  G+KP  +TFV++LTAC
Sbjct: 600 GEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 659

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH GLVD G+  ++ +  D G+EP ++H  C+ID LGR+G   EAE  I +MP K + ++
Sbjct: 660 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 719

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W  LL+SC++H N+   ++AAE L +L+P++ + Y L +N++++ GRW+D+  VR+ M  
Sbjct: 720 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGF 779

Query: 737 NCIVKDPAYS 746
             I K  A S
Sbjct: 780 KNIKKKQACS 789



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 183/679 (26%), Positives = 303/679 (44%), Gaps = 94/679 (13%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA---STALLDV 136
           MP RN VSWN ++S +VR GL  + +  + KM + G  P+   +AS+  A   S ++   
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMF-- 58

Query: 137 EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
             G + HG V K GL  ++YV+ A+L LY   G    +  VFEEM + N V++T++M G 
Sbjct: 59  REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           +      E +++++ M  + V  +  S+S V+  C               D    R + G
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCG-----------LLKDESLGRQIIG 167

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           Q      +K G E+ L + NSL+ M    G++D A  IF  + ER  +SWN + A Y Q 
Sbjct: 168 Q-----VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINML--------------------------VACVR 350
               ++  +   M+    E +  T   +L                          V CV 
Sbjct: 223 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 282

Query: 351 SGDIK----TGRE-----MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           +  ++     GR      +F  MP+  + SWN++++S+       +A+ L   M   G  
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            +  T    L++C      E G+ +H   + +    +  + + L+ +Y K      + RV
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
             ++P  D+V WN++I G + +    +A   F+ MR   +     +  +VLS+C      
Sbjct: 403 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 462

Query: 522 FQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
            + G+ +HA I   G+ +D  V ++LI MY KCGD+  ++  F+ +  +N +TWN M+  
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS-----------HSGLVDVGVE-- 627
            A +G+G+E ++L   M + GV  D  +F   L+A +           H   V +G E  
Sbjct: 523 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 582

Query: 628 --IFNSM---------------QLDHGVEPILDHYTCMIDCLGRAGHFHEA-----EMLI 665
             IFN+                 L   V   L  +  +I  LGR G+F E      EML 
Sbjct: 583 SFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML- 641

Query: 666 DEMPCKDDPVIWEVLLSSC 684
            EM  K   V +  LL++C
Sbjct: 642 -EMGIKPGHVTFVSLLTAC 659


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/723 (30%), Positives = 357/723 (49%), Gaps = 87/723 (12%)

Query: 95  LVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKN 154
           L + G  ++A+ +   +   G +    T   + +    L   E G+  H  + ++GL  +
Sbjct: 53  LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
           IY+ N+L++ Y+K G       VF  M+  + VT+++M++  A  +   +A + F  M  
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
             +  + ++  S+L  C                N +S     +++H +    G E D+ +
Sbjct: 173 ANIEPNRITFLSILKAC----------------NNYSMLEKAREIHTVVKASGMETDVAV 216

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
           + +L+ MY+K G++  A  IF  + ER+VVSW  +I    Q  +  +A EL ++M   G 
Sbjct: 217 ATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGI 276

Query: 335 EPDEVTSINMLVAC-----------------------------------VRSGDIKTGRE 359
            P+ VT +++L +C                                    +   I+  RE
Sbjct: 277 SPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARE 336

Query: 360 MFDSMPSPSVSSWNAMLSSYSQS-----ENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
            FD M    V SW+AM++ Y+QS     E+  E  +L   M+  GV P++ T   IL +C
Sbjct: 337 TFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKAC 396

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC--------------QRNELA-- 458
           +  G LE G+Q+HA   K     D  + + +  +Y+KC               +N +A  
Sbjct: 397 SVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWA 456

Query: 459 ---------------ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
                          E+VF  +   ++V WN MIAG + +    + F     M+     P
Sbjct: 457 SLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQP 516

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            + +  ++L +C  LS+  +G+ VHA+  K G  +D  V ++LI MY KCG++  AR  F
Sbjct: 517 DRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVF 576

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D +  ++TV WN M+ GY Q+G G EAV L+K M+   V P++ITF A+++AC  +GLV 
Sbjct: 577 DKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQ 636

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G EIF  MQ D  ++P   HY CM+D LGRAG   EAE  I  MPC+ D  +W  LL +
Sbjct: 637 EGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGA 696

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           C+ H NV+LA+ AA  + RL+P N++ Y  L+NIY+  GRWDD   VR++M +  + KD 
Sbjct: 697 CKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDR 756

Query: 744 AYS 746
             S
Sbjct: 757 GES 759



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 161/599 (26%), Positives = 281/599 (46%), Gaps = 118/599 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H  +   GL  D +L N LI  YSK  +  S + +F +M  +D+ +W+++++A   
Sbjct: 97  GKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAG 156

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           ++    A+  F+ M + N+                                P  IT  S+
Sbjct: 157 NNHPAKAFDTFERMKDANI-------------------------------EPNRITFLSI 185

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA      +E  R  H +V   G++ ++ VA AL+++Y+KCG    A  +F++M E N 
Sbjct: 186 LKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNV 245

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TA++   A+  ++ EA E++  M++  +S ++V+  S+L  C              +
Sbjct: 246 VSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSC-------------NT 292

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +R   G+++H    + G E D+ ++N+L+ MY K   +  A   F  + +R V+SW
Sbjct: 293 PEALNR---GRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISW 349

Query: 307 NVMIAGYGQK-YQSTKAI----ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
           + MIAGY Q  YQ  +++    +LL+RM+  G  P++VT +++L AC   G ++ GR++ 
Sbjct: 350 SAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIH 409

Query: 361 ----------------------------------FDSMPSPSVSSW-------------- 372
                                             F  M + +V +W              
Sbjct: 410 AEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLT 469

Query: 373 -----------------NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
                            N M++ Y+QS +  +  +L   M+  G +PDR T+  IL +C 
Sbjct: 470 SAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACG 529

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
           A+  LE GK VHA ++K     D  VA+ LIG+YSKC     A  VF +I   D V WN+
Sbjct: 530 ALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNA 589

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           M+AG   + +  EA   FK+M +  + P + +F  V+S+C +     +GR++   +++D
Sbjct: 590 MLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQED 648



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 170/635 (26%), Positives = 289/635 (45%), Gaps = 99/635 (15%)

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           EE++ P  V+   +   L K  R+ EA+++  ++ ++ + ++S +   ++  CA      
Sbjct: 37  EELAGPRSVSGGEVWR-LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCA------ 89

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                     K  R   G+ VH    +LG   D++L NSL++ Y+K GD+ S E +F  +
Sbjct: 90  ----------KLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRM 139

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------- 348
             R VV+W+ MIA Y       KA +  +RMK    EP+ +T +++L AC          
Sbjct: 140 TLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAR 199

Query: 349 -------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                     + G+I    E+F  M   +V SW A++ + +Q  
Sbjct: 200 EIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHR 259

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
              EA +L+ +M   G+ P+  T   +L+SC     L  G+++H+   +     D  VA+
Sbjct: 260 KLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVAN 319

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN------SLDIEAFMFFKQMR 497
            LI +Y KC   + A   F R+ + D++ W++MIAG + +      SLD E F   ++MR
Sbjct: 320 ALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLD-EVFQLLERMR 378

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           +  ++P + +F ++L +C+   +  QGRQ+HA+I K G+ +D  + +A+  MY KCG IY
Sbjct: 379 REGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIY 438

Query: 558 GARQFFDMMHGK-------------------------------NTVTWNEMIHGYAQNGY 586
            A Q F  M  K                               N V+WN MI GYAQ+G 
Sbjct: 439 EAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGD 498

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
             +   L   M   G +PD +T ++IL AC     ++ G ++ ++  +  G+E      T
Sbjct: 499 IAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERG-KLVHAEAVKLGLESDTVVAT 557

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA----NVRLAKRAAEELFR 702
            +I    + G   EA  + D++  + D V W  +L+    H      V L KR  +E   
Sbjct: 558 SLIGMYSKCGEVTEARTVFDKISNR-DTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERV- 615

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
             P N   ++ + +     G   + R +  +M E+
Sbjct: 616 --PPNEITFTAVISACGRAGLVQEGREIFRIMQED 648



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 200/444 (45%), Gaps = 81/444 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+HI   GL  D  + N LI +Y KCN    A+  FD+M  +D+ SW+A+++   +
Sbjct: 299 GRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQ 358

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S      Y+  + + E                        +  +M  EG  P  +T  S+
Sbjct: 359 S-----GYQDKESLDE---------------------VFQLLERMRREGVFPNKVTFMSI 392

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLD-------------------------------KNI 155
            KA +    +E GR+ H  + K+G +                               KN+
Sbjct: 393 LKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNV 452

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
               +LL++Y KCG    A  VF EMS  N V++  M++G A++  + +  E+   M  +
Sbjct: 453 VAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVE 512

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
               D V++ S+L     E CG  S +             G+ VH   +KLG E+D  ++
Sbjct: 513 GFQPDRVTIISIL-----EACGALSAL-----------ERGKLVHAEAVKLGLESDTVVA 556

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
            SL+ MY+K G++  A  +F  +  R  V+WN M+AGYGQ     +A++L +RM      
Sbjct: 557 TSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVP 616

Query: 336 PDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIK 390
           P+E+T   ++ AC R+G ++ GRE+F  M       P    +  M+    ++   +EA +
Sbjct: 617 PNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEE 676

Query: 391 LFREMQFRGVKPDRTTLAIILSSC 414
             + M     +PD +    +L +C
Sbjct: 677 FIQRMP---CEPDISVWHALLGAC 697


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 252/859 (29%), Positives = 413/859 (48%), Gaps = 168/859 (19%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            GK  HA I+ +G   D FL N L+ +YSKC +  SA+                       
Sbjct: 640  GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSAR----------------------- 676

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALV-----RNGLEEKALSVYNKMSNEGFVPTHI 121
                    ++FD  PER++V+WN ++ A        +G  ++ L ++  +       T +
Sbjct: 677  --------QVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRM 728

Query: 122  TLASVFKA--STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL--------------- 164
            TLA V K   ++  L    G   HG  IKIGL+ +++V+ AL+++               
Sbjct: 729  TLAPVLKLCLNSGCLWAAEG--VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFD 786

Query: 165  ----------------YAKCGWTKHAVPVFEEMSE----PNEVTFTAMMSGLAK------ 198
                            Y + G  K A  +F E       P+E +   +++G+++      
Sbjct: 787  WMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEG 846

Query: 199  ---TDRVVE--------------------------------ALEMFRLMIRKAVSIDSVS 223
                D+V                                  A+E F  M    +  D+V+
Sbjct: 847  KWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVT 906

Query: 224  LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
            L  VL   A              D +      G+QVH + +K G ++D+ ++NSL++MY+
Sbjct: 907  LLVVLAAVA-----------GTDDLEL-----GKQVHGIAVKSGLDSDVSVANSLVNMYS 950

Query: 284  KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
            K G    A  +F+++    ++SWN MI+   Q     +++ L   +   G +PD  T  +
Sbjct: 951  KMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLAS 1010

Query: 344  MLVACV------------------------------------RSGDIKTGREMFDSMPSP 367
            +L AC                                     +SG ++    +F +    
Sbjct: 1011 VLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDL 1070

Query: 368  SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
             ++ WNAM+  Y    + K+A++LF  +   G K D+ TLA    +C  + +L+ GKQ+H
Sbjct: 1071 DLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIH 1130

Query: 428  AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
            A ++K     D +V SG++ +Y KC     A  VF+ I   D V W SMI+G   N  + 
Sbjct: 1131 AHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNED 1190

Query: 488  EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
            +A   + +MRQ+ + P +++FAT++ + + +++  QGRQ+HA + K   V+D FVG++L+
Sbjct: 1191 QALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLV 1250

Query: 548  EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
            +MY KCG+I  A + F  M+ +N   WN M+ G AQ+G  +EAV L+K M + G++PD +
Sbjct: 1251 DMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRV 1310

Query: 608  TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
            +F+ IL+ACSH+GL     E  +SM  D+G+EP ++HY+C++D LGRAG   EA+ +I+ 
Sbjct: 1311 SFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIET 1370

Query: 668  MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
            MP K    I   LL +CR+  +V   KR A  LF L+P +SA Y LL+NIY++  RWDD+
Sbjct: 1371 MPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDV 1430

Query: 728  RAVRELMSENCIVKDPAYS 746
               R++M    + KDP +S
Sbjct: 1431 TDARKMMKRKNVKKDPGFS 1449



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 162/656 (24%), Positives = 296/656 (45%), Gaps = 96/656 (14%)

Query: 6    AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            A + +H + ++ GL  D F+   L+ +YSKC     A+ LFD M  +D+  WN +L    
Sbjct: 745  AAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYV 804

Query: 66   KSDDLEFAYKLFDEM------PER------------------------------------ 83
            +    + A++LF E       P+                                     
Sbjct: 805  QLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSD 864

Query: 84   ---NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
               +V  WN  +S  +  G    A+  +  M+        +TL  V  A     D+E G+
Sbjct: 865  DNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGK 924

Query: 141  RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
            + HG+ +K GLD ++ VAN+L+++Y+K G    A  VF +M   + +++ +M+S  A++ 
Sbjct: 925  QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSS 984

Query: 201  RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
               E++ +F  ++ + +  D  +L+SVL  C+    G+            SR +H   VH
Sbjct: 985  LEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGL----------NISRQIH---VH 1031

Query: 261  CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
             L  K G  AD  ++ +L+D+Y+K+G M+ AE +F N  +  +  WN M+ GY       
Sbjct: 1032 AL--KTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGK 1089

Query: 321  KAIELLQRMKSCGFEPDEVTSINMLVAC-------------------------------- 348
            KA+EL   +   G + D++T      AC                                
Sbjct: 1090 KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGIL 1149

Query: 349  ---VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
               ++ GD+     +F+ + +P   +W +M+S    + N  +A++++  M+   V PD  
Sbjct: 1150 DMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEY 1209

Query: 406  TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
            T A ++ + + +  LE G+Q+HA  +K     D +V + L+ +Y+KC   E A R+F ++
Sbjct: 1210 TFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM 1269

Query: 466  PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
               +I  WN+M+ GL+ +    EA   FK M+ + + P + SF  +LS+C+    + +  
Sbjct: 1270 NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAY 1329

Query: 526  Q-VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
            + +H+     G   +I   S L++   + G +  A +  + M  K + + N  + G
Sbjct: 1330 EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 1385


>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
 gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
          Length = 852

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 243/801 (30%), Positives = 386/801 (48%), Gaps = 129/801 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HAH ++ G   D F+  +L+++Y++C     A  LF+ M                 
Sbjct: 78  GKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETM----------------- 120

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                         P RN+ SW  ++S  + +GL E+A  ++  +  +G          V
Sbjct: 121 --------------PMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLV 166

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           FKA + L  VE GR+ HGLVIK     NIYV+NAL+ +Y KCG    A  V  +M E + 
Sbjct: 167 FKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDS 226

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI-DSVSLSSVLGVCAREGCGVESD--VF 243
           VT+ ++++  A    V EALE    M     S+ + VS S+V+G  A+ G   E+   +F
Sbjct: 227 VTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLF 286

Query: 244 AQSDNKFSRNVH-----------------GQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
                    N                   G+Q+H    +  F ++  + N+L+D+Y + G
Sbjct: 287 RMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCG 346

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
           DM  A  IF     ++V+S N MI GY                                 
Sbjct: 347 DMGGAAKIFLKFSVKNVLSCNTMIVGY--------------------------------- 373

Query: 347 ACVRSGDIKTGREMFDSMPSPSVS----SWNAMLSSYSQSENHKEAIKLFREMQFR-GVK 401
               SGD+   +E+FD M    +     SWN+++S Y ++    EA  +F+ M    G++
Sbjct: 374 --CESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIE 431

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           PD  TL  +L++CA    L  GK++HA ++      D +V   L+ +YSKCQ    A+  
Sbjct: 432 PDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVA 491

Query: 462 FHRIPELDIVCWNSMIAGLSLNS------------------------------------L 485
           F  + E D+  WN++I+G + ++                                    L
Sbjct: 492 FDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQL 551

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
           D+     F +M+ +++ P  ++   +L +C++L++  +G+Q HA   K GY  D+ +G+A
Sbjct: 552 DL-TMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAA 610

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           L++MY KCG +  A+  +D +   N V+ N M+   A +G+G+E + L++ M+A G  PD
Sbjct: 611 LVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPD 670

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            +TF+++L++C H G V+ G E F+ M   + V+P L HYT M+D L R+G  HEA  LI
Sbjct: 671 HVTFLSVLSSCVHVGSVETGCEFFDLMGY-YNVKPTLKHYTSMVDLLSRSGQLHEAYELI 729

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
            +MP + D V+W  LL  C  H N+ L + AAE L  L+P NS  Y LLAN+++   RW 
Sbjct: 730 KKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWT 789

Query: 726 DLRAVRELMSENCIVKDPAYS 746
           DL  VR +M +  + K P  S
Sbjct: 790 DLARVRGMMKDRGMHKSPGCS 810



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 130/265 (49%), Gaps = 40/265 (15%)

Query: 401 KPDRTT-LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           KP  T+  A +L SC    +   GKQVHA ++KT    D ++ + L+ +Y++C   + A+
Sbjct: 58  KPLNTSKYASVLDSCKCPKL---GKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDAD 114

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            +F  +P  ++  W ++++    + L  EAF+ F+ ++ + +    F F  V  +C+ L 
Sbjct: 115 FLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLG 174

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD------------------------ 555
           S   GRQ+H  + K  +  +I+V +ALI+MY KCG                         
Sbjct: 175 SVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVIT 234

Query: 556 -------IYGARQFFDMMHG-----KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
                  +Y A +F + M        N V+W+ +I G+AQNGY +EA+ +   M   G+ 
Sbjct: 235 ACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLV 294

Query: 604 PDDITFVAILTACSHSGLVDVGVEI 628
           P+  T   +L AC+    +D+G ++
Sbjct: 295 PNAQTLAGVLPACARLQRLDLGKQL 319


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/621 (35%), Positives = 336/621 (54%), Gaps = 79/621 (12%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKH------AVPVFEEMSEPNEVTFTAMMSGL 196
           H  ++K GL    Y  + LL L   C  + H      AV VFE   EPN + +  M+ GL
Sbjct: 2   HAQMVKTGLHNTNYALSKLLEL---CVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGL 58

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           A +  +V  LEM+  M+      ++ +   +L  CA+      S  F +          G
Sbjct: 59  ASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK------SKTFEE----------G 102

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +Q+H   +KLG E D +   SL+ MYA+NG ++ A  +F    +R VVS   +I GY  +
Sbjct: 103 RQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASR 162

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                              GD+++ R++FD +    V SWNAM+
Sbjct: 163 -----------------------------------GDVRSARKVFDXITERDVVSWNAMI 187

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH--------- 427
           + Y ++  ++EA++LF+EM    V+PD  TL  +LS+CA  G +E G+++H         
Sbjct: 188 TGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGF 247

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
            +SLK        + +  IG+YSKC   E+A  +F  +   D+V WN++I G +  +L  
Sbjct: 248 GSSLK--------IVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYK 299

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK--DGYVNDIFVGSA 545
           EA + F++M ++   P   +  +VL +CA L +   GR +H  I+K   G  N   + ++
Sbjct: 300 EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTS 359

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           LI+MY KCGDI  A Q F+ M  K+  +WN MI G+A +G  + A  L+  M  +G++PD
Sbjct: 360 LIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPD 419

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
           DIT V +L+ACSHSGL+D+G  IF S+  D+ + P L+HY CMID LG AG F EAE +I
Sbjct: 420 DITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEII 479

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
             MP + D VIW  LL +C++H N+ LA+  A++L  ++P+NS  Y LL+NIY++ GRW+
Sbjct: 480 HMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWE 539

Query: 726 DLRAVRELMSENCIVKDPAYS 746
           D+  +RE+++   + K P  S
Sbjct: 540 DVARIREVLNGKGMKKVPGCS 560



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 211/423 (49%), Gaps = 27/423 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA +++ G   D +    LI +Y++      A+ +FD    +D+ S  A+++    
Sbjct: 102 GRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYAS 161

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+  A K+FD + ER+VVSWN +I+  V N   E+AL ++ +M      P   TL SV
Sbjct: 162 RGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSV 221

Query: 127 FKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A      +E GR  H LV    G   ++ + NA + LY+KCG  + A  +FE +S  +
Sbjct: 222 LSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKD 281

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++  ++ G    +   EAL +F+ M+R   S + V++ SVL  CA  G     D+   
Sbjct: 282 VVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA---IDI--- 335

Query: 246 SDNKFSRNVHGQQVHCLTIKL--GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                     G+ +H    K   G      L  SL+DMYAK GD+++A  +F+++  +S+
Sbjct: 336 ----------GRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSL 385

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
            SWN MI G+    ++  A +L  RM+  G EPD++T + +L AC  SG +  GR +F S
Sbjct: 386 SSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKS 445

Query: 364 MP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           +      +P +  +  M+     +   KEA ++   M    ++PD      +L +C   G
Sbjct: 446 VTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMP---MEPDGVIWCSLLKACKMHG 502

Query: 419 ILE 421
            LE
Sbjct: 503 NLE 505



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 156/622 (25%), Positives = 268/622 (43%), Gaps = 132/622 (21%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           HA +++ GL +  +  ++L+EL   C  +          PH                D L
Sbjct: 2   HAQMVKTGLHNTNYALSKLLEL---CVVS----------PH---------------FDGL 33

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
            +A  +F+   E N++ WN ++  L  +      L +Y +M + G VP   T   + K+ 
Sbjct: 34  PYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSC 93

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
                 E GR+ H  V+K+G + + Y   +L+S+YA+ G  + A  VF+  S+ + V+ T
Sbjct: 94  AKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCT 153

Query: 191 AMMSGLAK--------------TDRVV-----------------EALEMFRLMIRKAVSI 219
           A+++G A               T+R V                 EALE+F+ M+R  V  
Sbjct: 154 ALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRP 213

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK-LGFEADLHLSNSL 278
           D  +L SVL  CA+ G  +E                G+++H L     GF + L + N+ 
Sbjct: 214 DEGTLVSVLSACAQSG-SIEL---------------GREIHTLVDDHHGFGSSLKIVNAF 257

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           + +Y+K GD++ A  +F  L  + VVSWN +I GY       +A+ L Q M   G  P++
Sbjct: 258 IGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 317

Query: 339 VTSINMLVAC-------------------------------------VRSGDIKTGREMF 361
           VT +++L AC                                      + GDI+   ++F
Sbjct: 318 VTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVF 377

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           +SM   S+SSWNAM+  ++       A  LF  M+  G++PD  TL  +LS+C+  G+L+
Sbjct: 378 NSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLD 437

Query: 422 SGKQVHAASLKTASHIDNYVASG-LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
            G+ +  +  +  +        G +I +       + AE + H +P E D V W S++  
Sbjct: 438 LGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKA 497

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS----------CAKLSSSFQGRQVH- 528
             ++  ++E    F Q +  E+ P       +LS+           A++     G+ +  
Sbjct: 498 CKMHG-NLELAESFAQ-KLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKK 555

Query: 529 ----AQIEKDGYVNDIFVGSAL 546
               + IE D  V++  +G  L
Sbjct: 556 VPGCSSIEIDSVVHEFIIGDKL 577


>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial [Vitis vinifera]
          Length = 1008

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 231/776 (29%), Positives = 385/776 (49%), Gaps = 86/776 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++++G   D FL   LI +Y+   N                            
Sbjct: 275 GKSIHGFVVKSGFSSDEFLTPALISMYAGGGN---------------------------- 306

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L  A  LFD   E+NVV WN++ISA  +N    +A  ++ +M      P  +T  S+
Sbjct: 307 ---LFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSI 363

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                   +  +G+  H  V+K  LD  + VA ALLS+YAK G    A  +F +M   N 
Sbjct: 364 IPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNL 423

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ +M+SG         +++ F  M  +    D++S+ ++L  C+              
Sbjct: 424 LSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACS-------------- 469

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             K    + G+  H  + +  F+++L++SN+LL  Y+  G + S+  +F  +P R+ +SW
Sbjct: 470 --KLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISW 527

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           N +I+G      + KA+ LL +M+    E D VT I+++  C                  
Sbjct: 528 NTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIK 587

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                               GDI  G+ +F+ MP  S+ SWNA+++ Y       E +  
Sbjct: 588 TGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMAS 647

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +M   G KP+  TL  +L SC     L  GK +HA +++T   ++  + + LI +Y++
Sbjct: 648 FCQMIREGQKPNYVTLLNLLPSCRT---LLQGKSIHAFAVRTGVIVETPIITSLISMYAR 704

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
            +       +F    + DI  WN++++         E+  FF ++    + P   +F ++
Sbjct: 705 FENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSL 764

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           +S+C +LSS      V A + + G+   I + +ALI+++ +CG+I  A++ F+ +  K+ 
Sbjct: 765 ISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDA 824

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           V+W+ MI+GY  +G  + A+ L   M  SG+KPD IT+ ++L+ACSH G +D G  IFNS
Sbjct: 825 VSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNS 884

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M ++ GV   ++HY CM+D LGR G  +EA   ++++PCK    + E LL +C +H NV+
Sbjct: 885 M-VEEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVK 943

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           L ++ +  LF LDPKNS  Y +L NIY++ GRW D   VR  M E  + K P +SL
Sbjct: 944 LGEKISSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSL 999



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 168/667 (25%), Positives = 316/667 (47%), Gaps = 56/667 (8%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            A++    K+  +  A  + D++ + ++V+WN LIS    NG +++   V  +++  G  
Sbjct: 194 TALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLK 253

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T AS+    T +  ++ G+  HG V+K G   + ++  AL+S+YA  G    A  +
Sbjct: 254 PNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDL 313

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+  +E N V + +M+S  A+  +  EA +MF+ M++  +  + V+  S++  C      
Sbjct: 314 FDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCC------ 367

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                   S N +    +G+ +H   +K   ++ L ++ +LL MYAK GD++SA+ IF  
Sbjct: 368 ------ENSANFW----YGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQ 417

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR------- 350
           +P R+++SWN MI+GYG       +++    M+  GF+PD ++ +N+L AC +       
Sbjct: 418 MPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLG 477

Query: 351 ----------------------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                        G + +  ++F  MP  +  SWN ++S    +
Sbjct: 478 KAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHN 537

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
            + K+A+ L  +MQ   ++ D  TL  I+  C     L  G  +H  ++KT    D  + 
Sbjct: 538 GDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLV 597

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + LI +Y  C      + +F  +P   IV WN++I G   + L  E    F QM +    
Sbjct: 598 NALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQK 657

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +   +L SC  L    QG+ +HA   + G + +  + ++LI MY +  +I      
Sbjct: 658 PNYVTLLNLLPSCRTL---LQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFL 714

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F+M   ++   WN ++  Y Q     E+V  + +++ + V+PD ITF+++++AC     +
Sbjct: 715 FEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSL 774

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           ++   +  +  +  G +  +     +ID   R G+   A+ + + +  K D V W  +++
Sbjct: 775 NLSNSVM-AYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSK-DAVSWSTMIN 832

Query: 683 SCRLHAN 689
              LH +
Sbjct: 833 GYGLHGD 839



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 172/655 (26%), Positives = 306/655 (46%), Gaps = 72/655 (10%)

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
           E A   F+ + + +V   N +I  L  +GL E  L VY K    G      T   V KA 
Sbjct: 106 ELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKAC 165

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
           TAL  V      H +V++   ++N+ +  AL+  YAK G    A  V +++S+P+ VT+ 
Sbjct: 166 TALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWN 225

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           A++SG +      E  E+ R +    +  +  + +S++ +C R  C    D+        
Sbjct: 226 ALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKC---LDI-------- 274

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
                G+ +H   +K GF +D  L+ +L+ MYA  G++  A  +F +  E++VV WN MI
Sbjct: 275 -----GKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMI 329

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------------------- 351
           + Y Q  +S++A ++ Q+M     +P+ VT ++++  C  S                   
Sbjct: 330 SAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLD 389

Query: 352 ----------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                           GD+ +   +F  MP  ++ SWN+M+S Y  +   + ++  F +M
Sbjct: 390 SQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDM 449

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
           QF G  PD  ++  ILS+C+ +  +  GK  HA S +     +  +++ L+  YS C + 
Sbjct: 450 QFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKL 509

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
             + ++F ++P  + + WN++I+G   N    +A     +M+Q +M     +  +++  C
Sbjct: 510 SSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPIC 569

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
               +  QG  +H    K G+  D+ + +ALI MY  CGDI   +  F++M  ++ V+WN
Sbjct: 570 RVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWN 629

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS--------HSGLVDVGVE 627
            +I GY  +   +E +  +  MI  G KP+ +T + +L +C         H+  V  GV 
Sbjct: 630 ALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTLLQGKSIHAFAVRTGVI 689

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           +           PI+   T +I    R  + +    L  EM  K+D  +W  ++S
Sbjct: 690 V---------ETPII---TSLISMYARFENINSFIFLF-EMGGKEDIALWNAIMS 731



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 184/375 (49%), Gaps = 6/375 (1%)

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
           FE + V    ++    ++G +   R + D +  P + +WNA++S YS +   KE  ++ R
Sbjct: 186 FEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLR 245

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           ++   G+KP+ +T A I+  C  M  L+ GK +H   +K+    D ++   LI +Y+   
Sbjct: 246 QINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGG 305

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
              +A  +F    E ++V WNSMI+  + N    EAF  F+QM +  M P   +F +++ 
Sbjct: 306 NLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIP 365

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
            C   ++ + G+ +HA + K    + + V +AL+ MY K GD+  A   F  M  +N ++
Sbjct: 366 CCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLS 425

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN MI GY  NG  + ++  + DM   G  PD I+ V IL+ACS    + +G +  ++  
Sbjct: 426 WNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLG-KAAHAFS 484

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN---- 689
                +  L+    ++      G    +  L  +MP + + + W  L+S C  + +    
Sbjct: 485 FRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLR-NAISWNTLISGCVHNGDTKKA 543

Query: 690 VRLAKRAAEELFRLD 704
           V L  +  +E   LD
Sbjct: 544 VALLHKMQQEKMELD 558



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 175/346 (50%), Gaps = 2/346 (0%)

Query: 337 DEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           DE      +++C   G  +     F+++  PSV   N M+         ++ + ++ + +
Sbjct: 88  DEYVVAEFIISCFHLGAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCR 147

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
             G   D  T   ++ +C A+G +   + VH   L+T+   +  + + L+  Y+K  R  
Sbjct: 148 VLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMV 207

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A  V  +I + D+V WN++I+G SLN  D E F   +Q+ +  + P   +FA+++  C 
Sbjct: 208 KARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCT 267

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
           ++     G+ +H  + K G+ +D F+  ALI MY   G+++ AR  FD    KN V WN 
Sbjct: 268 RMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNS 327

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDH 636
           MI  YAQN    EA ++++ M+ + ++P+ +TFV+I+  C +S     G  + ++  + +
Sbjct: 328 MISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSL-HAHVMKY 386

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            ++  L   T ++    + G  + A+ +  +MP + + + W  ++S
Sbjct: 387 RLDSQLSVATALLSMYAKLGDLNSADFIFYQMP-RRNLLSWNSMIS 431



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 211/478 (44%), Gaps = 64/478 (13%)

Query: 5    VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
            + G  LH + ++ G   D  L N LI +Y  C + ++ + LF                  
Sbjct: 576  IQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLF------------------ 617

Query: 65   CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                         + MP R++VSWN LI+    + L+ + ++ + +M  EG  P ++TL 
Sbjct: 618  -------------EVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLL 664

Query: 125  SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            ++  +   LL    G+  H   ++ G+     +  +L+S+YA+       + +FE   + 
Sbjct: 665  NLLPSCRTLL---QGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKE 721

Query: 185  NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
            +   + A+MS   +T    E++  F  ++   V  D ++  S++  C +           
Sbjct: 722  DIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLS--------- 772

Query: 245  QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                  S N+    V    I+ GF+  + +SN+L+D++A+ G++  A+ IF  L  +  V
Sbjct: 773  ------SLNL-SNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAV 825

Query: 305  SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
            SW+ MI GYG    S  A+ LL +M+  G +PD +T  ++L AC   G I  G  +F+SM
Sbjct: 826  SWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSM 885

Query: 365  PSPSVSS----WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                V      +  M+    ++    EA     ++     KP  + L  +L +C   G +
Sbjct: 886  VEEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLP---CKPSVSLLESLLGACIIHGNV 942

Query: 421  ESGKQVHAASLK-----TASHIDNYVASGLIGIYSKCQ--RNELAERVFHRIPELDIV 471
            + G+++ +   +     + S++  Y      G +      R+++ ER   +IP   +V
Sbjct: 943  KLGEKISSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLV 1000



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/460 (23%), Positives = 190/460 (41%), Gaps = 85/460 (18%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A + GK  HA   R     +  + N L+  YS C    S+  LF KMP ++  SWN   
Sbjct: 472 EAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNT-- 529

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                        LIS  V NG  +KA+++ +KM  E      +
Sbjct: 530 -----------------------------LISGCVHNGDTKKAVALLHKMQQEKMELDLV 560

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           TL S+        ++  G   HG  IK G   ++ + NAL+S+Y  CG       +FE M
Sbjct: 561 TLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVM 620

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + V++ A+++G        E +  F  MIR+    + V+L ++L  C          
Sbjct: 621 PWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTL------- 673

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                       + G+ +H   ++ G   +  +  SL+ MYA+  +++S   +F    + 
Sbjct: 674 ------------LQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKE 721

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------ 349
            +  WN +++ Y Q   + +++     +     EPD +T ++++ ACV            
Sbjct: 722 DIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVM 781

Query: 350 -----------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  R G+I   +++F+ + S    SW+ M++ Y    + +
Sbjct: 782 AYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSE 841

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
            A+ L  +M+  G+KPD  T A +LS+C+  G ++ G  +
Sbjct: 842 AALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMI 881


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/707 (29%), Positives = 367/707 (51%), Gaps = 53/707 (7%)

Query: 76  LFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD 135
           +FD+M ER++ +WN ++   V NG    AL +Y +M + G      T   + KA   + D
Sbjct: 14  IFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVED 73

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV-TFTAMMS 194
           +  G   HGL IK G D  ++V N+L++LYAKC     A  +F+ M   N+V ++ +++S
Sbjct: 74  LFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIIS 133

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
             +      EAL +F  M++  V  ++ + ++ L  C               D+ F +  
Sbjct: 134 AYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQAC--------------EDSSFIK-- 177

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G Q+H   +K G   D++++N+L+ MY + G M  A VIF NL  + +V+WN M+ G+ 
Sbjct: 178 LGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFI 237

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-------------- 360
           Q    ++A+E    +++   +PD+V+ I+++VA  R G +  G+E+              
Sbjct: 238 QNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNIL 297

Query: 361 ---------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                                FD M    + SW    + Y+Q++ + +A++L R++Q  G
Sbjct: 298 VGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEG 357

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           +  D T +  IL +C  +  L   K++H  +++     D  + + +I +Y +C   + A 
Sbjct: 358 MDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAV 416

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           R+F  I   D+V W SMI+    N L  +A   F  M++  + P   +  ++LS+   LS
Sbjct: 417 RIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLS 476

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +  +G+++H  I + G++ +  + + L++MY +CG +  A + F     +N + W  MI 
Sbjct: 477 TLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMIS 536

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
            Y  +GYG+ AV L+  M    + PD ITF+A+L ACSHSGLV+ G      M+ ++ +E
Sbjct: 537 AYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLE 596

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P  +HYTC++D LGR     EA  ++  M  +  P +W  LL +CR+H+N  + + AAE+
Sbjct: 597 PWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEK 656

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L  LD  N   Y L++N++++ GRW D+  VR  M  + + K+P  S
Sbjct: 657 LLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCS 703



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/545 (24%), Positives = 253/545 (46%), Gaps = 82/545 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKM-PHKDIYSWNAILSAQC 65
           G  +H   ++ G     F+ N L+ LY+KCN+ + A+ LFD+M    D+ SWN+I+SA  
Sbjct: 77  GAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYS 136

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                           NG+  +AL ++++M   G V    T A+
Sbjct: 137 G-------------------------------NGMCTEALCLFSEMLKAGVVTNTYTFAA 165

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             +A      ++ G + H  ++K G   ++YVANAL+++Y + G    A  +F  +   +
Sbjct: 166 ALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKD 225

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+ +M++G  +     EALE F  +    +  D VS+ S++    R G          
Sbjct: 226 IVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLG---------- 275

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                   ++G+++H   IK GF++++ + N+L+DMYAK   M      F  +  + ++S
Sbjct: 276 ------YLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLIS 329

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------V 349
           W    AGY Q     +A+ELL++++  G + D     ++L+AC                +
Sbjct: 330 WTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTI 389

Query: 350 RS------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
           R                   G I     +F+S+    V SW +M+S Y  +    +A+++
Sbjct: 390 RGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEV 449

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F  M+  G++PD  TL  ILS+  ++  L+ GK++H   ++    ++  +++ L+ +Y++
Sbjct: 450 FSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYAR 509

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E A ++F      +++ W +MI+   ++     A   F +M+  ++ P   +F  +
Sbjct: 510 CGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLAL 569

Query: 512 LSSCA 516
           L +C+
Sbjct: 570 LYACS 574



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 32/238 (13%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H + +R GL  D  L N +I++Y +C     A  +F+ +  KD+ SW +        
Sbjct: 382 KEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTS-------- 432

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                                  +IS  V NGL  KAL V++ M   G  P ++TL S+ 
Sbjct: 433 -----------------------MISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSIL 469

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A  +L  ++ G+  HG +I+ G      ++N L+ +YA+CG  + A  +F      N +
Sbjct: 470 SAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLI 529

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +TAM+S          A+E+F  M  + +  D ++  ++L  C+  G   E   F +
Sbjct: 530 LWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLE 587


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/677 (32%), Positives = 358/677 (52%), Gaps = 61/677 (9%)

Query: 111 MSNEGFVPTHITLASVFKASTALL-----DVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
           +S   ++P     A+V++   ALL      ++  R+   LV K GL +  +    L+SL+
Sbjct: 25  LSERNYIP-----ANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLF 79

Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
            + G    A  VFE +     V +  M+ G AK   + +AL+ F  M    V     + +
Sbjct: 80  CRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFT 139

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
            +L VC  E    E  V             G+++H L +K GF  DL     L +MYAK 
Sbjct: 140 YLLKVCGDEA---ELRV-------------GKEIHGLLVKSGFSLDLFAMTGLENMYAKC 183

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
             ++ A  +F  +PER +VSWN ++AGY Q   +  A+E+++ M     +P  +T +++L
Sbjct: 184 RQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVL 243

Query: 346 VAC-----------------------------------VRSGDIKTGREMFDSMPSPSVS 370
            A                                     + G ++T R++FD M   +V 
Sbjct: 244 PAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVV 303

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           SWN+M+ +Y Q+EN KEA+ +F++M   GVKP   ++   L +CA +G LE G+ +H  S
Sbjct: 304 SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
           ++     +  V + LI +Y KC+  + A  +F ++    +V WN+MI G + N   I+A 
Sbjct: 364 VELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDAL 423

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
            +F QMR   + P  F++ +V+++ A+LS +   + +H  + +     ++FV +AL++MY
Sbjct: 424 NYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMY 483

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            KCG I  AR  FDMM  ++  TWN MI GY  +G+G  A+ L+++M    +KP+ +TF+
Sbjct: 484 AKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFL 543

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
           ++++ACSHSGLV+ G++ F  M+ ++ +E  +DHY  M+D LGRAG  +EA   I +MP 
Sbjct: 544 SVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPV 603

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
           K    ++  +L +C++H NV  A++AAE LF L+P +   + LLANIY +   W+ +  V
Sbjct: 604 KPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQV 663

Query: 731 RELMSENCIVKDPAYSL 747
           R  M    + K P  S+
Sbjct: 664 RVSMLRQGLRKTPGCSM 680



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 214/452 (47%), Gaps = 82/452 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++++G   D F    L  +Y+KC   + A+                       
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR----------------------- 190

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+FD MPER++VSWN +++   +NG+   AL +   M  E   P+ IT+ SV
Sbjct: 191 --------KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSV 242

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A +AL  +  G+  HG  ++ G D  + ++ AL+ +YAKCG  + A  +F+ M E N 
Sbjct: 243 LPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNV 302

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +M+    + +   EA+ +F+ M+ + V    VS+   L  CA  G           
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG----------- 351

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                R   G+ +H L+++LG + ++ + NSL+ MY K  ++D+A  +F  L  R++VSW
Sbjct: 352 --DLER---GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA------------------- 347
           N MI G+ Q  +   A+    +M+S   +PD  T ++++ A                   
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466

Query: 348 -CV---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
            C+               + G I   R +FD M    V++WNAM+  Y      K A++L
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           F EMQ   +KP+  T   ++S+C+  G++E+G
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/539 (23%), Positives = 244/539 (45%), Gaps = 84/539 (15%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           + +NGL+ + F   +L+ L+ +  +   A  +F+ +  K    ++ +L    K  DL+  
Sbjct: 60  VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLD-- 117

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
                                        KAL  + +M  +   P       + K     
Sbjct: 118 -----------------------------KALQFFVRMRYDDVEPVVYNFTYLLKVCGDE 148

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
            ++  G+  HGL++K G   +++    L ++YAKC     A  VF+ M E + V++  ++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVESDVFAQSDNKFSR 252
           +G ++      ALEM + M  + +    +++ SVL  V A     V              
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV-------------- 254

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G+++H   ++ GF++ +++S +L+DMYAK G +++A  +F  + ER+VVSWN MI  
Sbjct: 255 ---GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------------- 358
           Y Q     +A+ + Q+M   G +P +V+ +  L AC   GD++ GR              
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371

Query: 359 ---------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                                 MF  + S ++ SWNAM+  ++Q+    +A+  F +M+ 
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
           R VKPD  T   ++++ A + I    K +H   +++    + +V + L+ +Y+KC    +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
           A  +F  + E  +  WN+MI G   +     A   F++M++  + P   +F +V+S+C+
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 550



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 201/413 (48%), Gaps = 55/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H + +R+G      +   L+++Y+KC +                            
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGS---------------------------- 286

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              LE A +LFD M ERNVVSWN++I A V+N   ++A+ ++ KM +EG  PT +++   
Sbjct: 287 ---LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L D+E GR  H L +++GLD+N+ V N+L+S+Y KC     A  +F ++     
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ AM+ G A+  R ++AL  F  M  + V  D+ +  SV+   A              
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA-------------- 449

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             + S   H + +H + ++   + ++ ++ +L+DMYAK G +  A +IF  + ER V +W
Sbjct: 450 --ELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW 507

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N MI GYG       A+EL + M+    +P+ VT ++++ AC  SG ++ G + F  M  
Sbjct: 508 NAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKE 567

Query: 367 P-----SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                 S+  + AM+    ++    EA     +M    VKP       +L +C
Sbjct: 568 NYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP---VKPAVNVYGAMLGAC 617



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 40/206 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            K +H  ++R+ L  + F+   L+++Y+KC                      AI+ A+  
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCG---------------------AIMIARL- 494

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +FD M ER+V +WN +I     +G  + AL ++ +M      P  +T  SV
Sbjct: 495 ---------IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545

Query: 127 FKASTALLDVEHGRRCHGLV-----IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
             A +    VE G +C  ++     I++ +D       A++ L  + G    A     +M
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDH----YGAMVDLLGRAGRLNEAWDFIMQM 601

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALE 207
                V     M G  +  + V   E
Sbjct: 602 PVKPAVNVYGAMLGACQIHKNVNFAE 627


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/625 (33%), Positives = 333/625 (53%), Gaps = 51/625 (8%)

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
             ++ H L+IK   +   ++ N L++ Y+K G   +A  VF++M +PN  ++  M+S  +
Sbjct: 23  QAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYS 82

Query: 198 KTDRVVEALEMFRLMI-RKAVSIDS-----VSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           K+  +    E+F +M  R  VS +S     V   SV+         ++  V   +   FS
Sbjct: 83  KSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFS 142

Query: 252 RNVH----------GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
             +           G+Q+H   +K GF A + + +SL+DMYAK G +  A  +F  + ER
Sbjct: 143 TMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQER 202

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
           +VV +N MI G                                    +RSG +K  + +F
Sbjct: 203 NVVMYNTMITG-----------------------------------LLRSGMVKDSKRLF 227

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
             M      SW  M++   Q+    EA+ LFR+M+  G+  D+ T   +L++C  +  L+
Sbjct: 228 HGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALK 287

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            GK++H   +++  + + +V S L+ +Y KC+    AE VF R+   ++V W +M+ G  
Sbjct: 288 EGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYG 347

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N    EA   F  M++N + P  F+  +V+SSCA L+S  +G Q H Q    G ++ I 
Sbjct: 348 QNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFIT 407

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           V +ALI +Y KCG I  + Q FD M  ++ V+W  ++ GYAQ G  +E + L++ M+  G
Sbjct: 408 VSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQG 467

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           +KPD +TF+A+L+ACS +GLV+ G + F SM  DHG+ P  DHYTCMID  GRAG   EA
Sbjct: 468 LKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEA 527

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           +  I++MP   D + W  LLSSCRL+ N  + K AAE L  LDP+N A Y LL++IY++ 
Sbjct: 528 KNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAK 587

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           G+W ++  +R  M E    K+P +S
Sbjct: 588 GKWSNVAQLRRGMREKGARKEPGFS 612



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 158/552 (28%), Positives = 265/552 (48%), Gaps = 89/552 (16%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +     K LH  I+++    +TFL N LI  YSK  N   A+H+FDKMP  + +SWN +L
Sbjct: 19  RNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTML 78

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP-TH 120
           SA  KS DL    ++F  MP R+ VSWN+LIS  V  G   +A+  YN M  +G +    
Sbjct: 79  SAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNR 138

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           IT +++    ++   V+ GR+ HG ++K G    ++V ++L+ +YAK G    A  VF+E
Sbjct: 139 ITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDE 198

Query: 181 MSEPNEVTFTAMMSGLAKTDRV-------------------------------VEALEMF 209
           + E N V +  M++GL ++  V                                EA+++F
Sbjct: 199 VQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLF 258

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
           R M ++ +++D  +  SVL  C     G+ +               G+++H L I+ G+ 
Sbjct: 259 RDMRQEGMAMDQYTFGSVLTACG----GLRA------------LKEGKEIHTLIIRSGYN 302

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
            ++ + ++L+DMY K   +  AE +F  +  ++VVSW  M+ GYGQ   S +A+ +   M
Sbjct: 303 HNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDM 362

Query: 330 KSCGFEPDEVTSINMLVACV-----------------------------------RSGDI 354
           +  G EPD+ T  +++ +C                                    + G I
Sbjct: 363 QRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSI 422

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +   ++FD M      SW A++S Y+Q     E I LF  M  +G+KPD  T   +LS+C
Sbjct: 423 EDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSAC 482

Query: 415 AAMGILESGKQVHAASLKTASHI---DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDI 470
           +  G++E G+Q   + LK    I   D+Y    +I ++ +  R E A+   +++P   D 
Sbjct: 483 SRAGLVERGQQYFESMLKDHGIIPFSDHYTC--MIDLFGRAGRLEEAKNFINKMPFSPDS 540

Query: 471 VCWNSMIAGLSL 482
           + W ++++   L
Sbjct: 541 IGWATLLSSCRL 552



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 219/423 (51%), Gaps = 24/423 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  I++ G     F+ + L+++Y+K      A  +FD++  +++  +N +++   +
Sbjct: 157 GRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLR 216

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S  ++ + +LF  M ER+ +SW  +I+ L++NGLE +A+ ++  M  EG      T  SV
Sbjct: 217 SGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSV 276

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L  ++ G+  H L+I+ G + N++V +AL+ +Y KC   ++A  VF+ M+  N 
Sbjct: 277 LTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNV 336

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM+ G  +     EA+ +F  M R  +  D  +L SV+  CA      E       
Sbjct: 337 VSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEE------- 389

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q HC  +  G  + + +SN+L+ +Y K G ++ +  +F  +  R  VSW
Sbjct: 390 ---------GAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSW 440

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             +++GY Q  ++ + I+L +RM   G +PD VT I +L AC R+G ++ G++ F+SM  
Sbjct: 441 TALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLK 500

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  M+  + ++   +EA     +M F    PD    A +LSSC   G  E
Sbjct: 501 DHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPF---SPDSIGWATLLSSCRLYGNEE 557

Query: 422 SGK 424
            GK
Sbjct: 558 IGK 560


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/662 (32%), Positives = 344/662 (51%), Gaps = 54/662 (8%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L  + +A      ++ G+  H  V+ +GL  +I++   L++LY  C    HA  VF+ M 
Sbjct: 6   LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNME 65

Query: 183 EPNEVT-FTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            P E++ +  +M+G  K    VEALE+F +L+    +  DS +  SVL  C         
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACG-------- 117

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                      + V G+ +H   +K G   D+ + +SL+ MYAK    + A  +F+ +PE
Sbjct: 118 --------GLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPE 169

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           + V  WN +I+ Y Q     +A+E    M+  GFEP+ VT    + +C R  D+  G E+
Sbjct: 170 KDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEI 229

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              F+ MP  +V +WN+M+S Y    + 
Sbjct: 230 HEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDS 289

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
              I+LF+ M   GVKP  TTL+ ++  C+    L  GK VH  +++     D ++ S L
Sbjct: 290 ISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSL 349

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y KC + ELAE +F  IP+  +V WN MI+G        EA   F +MR++ + P  
Sbjct: 350 MDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDA 409

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +F +VL++C++L++  +G ++H  I +    N+  V  AL++MY KCG +  A   F  
Sbjct: 410 ITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKC 469

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  ++ V+W  MI  Y  +G    A+ L+ +M+ S +KPD +TF+AIL+AC H+GLVD G
Sbjct: 470 LPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEG 529

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP-CKDDPVIWEVLLSSC 684
              FN M   +G+ P ++HY+C+ID LGRAG  HEA  ++ + P  +DD  +   L S+C
Sbjct: 530 CYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSAC 589

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           RLH N+ L    A  L   DP +S+ Y LL+N+Y+S  +WD++R VR  M E  + K+P 
Sbjct: 590 RLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPG 649

Query: 745 YS 746
            S
Sbjct: 650 CS 651



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 166/595 (27%), Positives = 274/595 (46%), Gaps = 85/595 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKL+H  ++  GL +D FLC  LI LY  C       HL+D               A+C 
Sbjct: 22  GKLIHQKVVTLGLQNDIFLCKNLINLYLSC-------HLYDH--------------AKC- 59

Query: 67  SDDLEFAYKLFDEMPERNVVS-WNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLA 124
                    +FD M     +S WN L++   +N +  +AL ++ K+ +  ++ P   T  
Sbjct: 60  ---------VFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYP 110

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV KA   L     G+  H  ++K GL  +I V ++L+ +YAKC   + A+ +F EM E 
Sbjct: 111 SVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEK 170

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +   +  ++S   ++    EALE F LM R     +SV++++ +  CAR           
Sbjct: 171 DVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCAR----------- 219

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                   N  G ++H   I  GF  D  +S++L+DMY K G ++ A  +F  +P+++VV
Sbjct: 220 ----LLDLN-RGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVV 274

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------------- 351
           +WN MI+GYG K  S   I+L +RM + G +P   T  ++++ C RS             
Sbjct: 275 AWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYT 334

Query: 352 ----------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                 G ++    +F  +P   V SWN M+S Y       EA+
Sbjct: 335 IRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEAL 394

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF EM+   V+PD  T   +L++C+ +  LE G+++H   ++     +  V   L+ +Y
Sbjct: 395 GLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMY 454

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC   + A  VF  +P+ D+V W SMI     +     A   F +M Q+ M P + +F 
Sbjct: 455 AKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFL 514

Query: 510 TVLSSCAKLSSSFQGRQVHAQ-IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            +LS+C       +G     Q +   G +  +   S LI++  + G ++ A +  
Sbjct: 515 AILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEIL 569



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 220/455 (48%), Gaps = 82/455 (18%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           +V GK++H  +++ GL  D  + + L+ +Y+KCN        F+K               
Sbjct: 122 YVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNA-------FEK--------------- 159

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                    A  LF+EMPE++V  WN +IS   ++G  ++AL  +  M   GF P  +T+
Sbjct: 160 ---------AIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTI 210

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +   +   LLD+  G   H  +I  G   + ++++AL+ +Y KCG  + A+ VFE+M +
Sbjct: 211 TTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPK 270

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
              V + +M+SG       +  +++F+ M  + V     +LSS++ VC+R          
Sbjct: 271 KTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRS--------- 321

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                  +R + G+ VH  TI+   ++D+ +++SL+D+Y K G ++ AE IF  +P+  V
Sbjct: 322 -------ARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKV 374

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           VSWNVMI+GY  + +  +A+ L   M+    EPD +T  ++L AC +   ++ G E+   
Sbjct: 375 VSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNL 434

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           F  +P   + SW +M+++Y        A
Sbjct: 435 IIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVA 494

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           ++LF EM    +KPDR T   ILS+C   G+++ G
Sbjct: 495 LELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEG 529



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 124/276 (44%), Gaps = 32/276 (11%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GK +H + +RN +  D F+ + L++LY KC                            
Sbjct: 325 LEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGK-------------------------- 358

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                +E A  +F  +P+  VVSWN +IS  V  G   +AL ++++M      P  IT  
Sbjct: 359 -----VELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFT 413

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV  A + L  +E G   H L+I+  LD N  V  ALL +YAKCG    A  VF+ + + 
Sbjct: 414 SVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR 473

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVF 243
           + V++T+M++      +   ALE+F  M++  +  D V+  ++L  C   G   E    F
Sbjct: 474 DLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYF 533

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
            Q  N +      +   CL   LG    LH +  +L
Sbjct: 534 NQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEIL 569


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/576 (35%), Positives = 322/576 (55%), Gaps = 53/576 (9%)

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +A  VFE + EPN++ +  M+ G A +   V +L ++  M+   +  +S +   +L  CA
Sbjct: 16  YATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCA 75

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
           +      S  F +          GQQ+H   +KLGF+ DL++  SL+ MY +N  ++ A 
Sbjct: 76  K------SKTFTE----------GQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAY 119

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F     R VVS+  +I GY  +                                   G
Sbjct: 120 KVFDRSSHRDVVSYTALITGYASR-----------------------------------G 144

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           DI++ +++FD +P   V SWNAM+S Y+++  +KEA++LF EM    V+PD +T   +LS
Sbjct: 145 DIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLS 204

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +CA  G +E G+QVH+         +  + + LI +YSKC   E A  +F  +   D++ 
Sbjct: 205 ACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVIS 264

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           WN++I G +  +L  EA + F++M ++   P   +  +VL +CA L +   GR +H  I+
Sbjct: 265 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYID 324

Query: 533 K--DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           K   G  N   + ++LI+MY KCGDI  A Q F+ M  K+  +WN MI G+A +G  D +
Sbjct: 325 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADAS 384

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
             L+  M   G++PDDITFV +L+ACSHSG++D+G  IF SM  D+ + P L+HY CMID
Sbjct: 385 FDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMID 444

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            LG +G F EAE +I+ M  + D VIW  LL +C++H NV LA+  A+ L +++P+N + 
Sbjct: 445 LLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSS 504

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y LL+NIY+S GRW+D+  +R L++  C+ K P  S
Sbjct: 505 YILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCS 540



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 215/427 (50%), Gaps = 26/427 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K    G+ +H  +L+ G   D ++   LI +Y +      A  +FD+  H+D+ S+ A++
Sbjct: 78  KTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALI 137

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +      D+  A KLFDE+P ++VVSWN +IS     G  ++AL ++ +M      P   
Sbjct: 138 TGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDES 197

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  +V  A      +E GR+ H  V   G D N+ + NAL+ LY+KCG  + A  +F+ +
Sbjct: 198 TYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGL 257

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S  + +++  ++ G    +   EAL +F+ M+R   + + V++ SVL  CA  G     D
Sbjct: 258 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA---ID 314

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKL--GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           +             G+ +H    K   G      L  SL+DMYAK GD+++A  +F+++ 
Sbjct: 315 I-------------GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSML 361

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            +S+ SWN MI G+    ++  + +L  RM+  G EPD++T + +L AC  SG +  GR 
Sbjct: 362 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRH 421

Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +F SM      +P +  +  M+     S   KEA ++   M+   ++PD      +L +C
Sbjct: 422 IFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKAC 478

Query: 415 AAMGILE 421
              G +E
Sbjct: 479 KMHGNVE 485



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 196/427 (45%), Gaps = 84/427 (19%)

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D L +A  +F+ + E N + WN +I     +     +L++Y  M + G +P   T   + 
Sbjct: 12  DGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLL 71

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL----------------------- 164
           K+         G++ HG V+K+G D ++YV  +L+S+                       
Sbjct: 72  KSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVV 131

Query: 165 --------YAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
                   YA  G  + A  +F+E+   + V++ AM+SG A+T    EALE+F  M++  
Sbjct: 132 SYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMN 191

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  +  +VL  CA  G  +E                G+QVH      GF+++L + N
Sbjct: 192 VRPDESTYVTVLSACAHSG-SIEL---------------GRQVHSWVDDHGFDSNLKIVN 235

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D+Y+K G++++A  +F  L  + V+SWN +I GY       +A+ L Q M   G  P
Sbjct: 236 ALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 295

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           ++VT +++L AC                                      + GDI+   +
Sbjct: 296 NDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 355

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F+SM   S+SSWNAM+  ++       +  LF  M+  G++PD  T   +LS+C+  G+
Sbjct: 356 VFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGM 415

Query: 420 LESGKQV 426
           L+ G+ +
Sbjct: 416 LDLGRHI 422


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 241/698 (34%), Positives = 370/698 (53%), Gaps = 64/698 (9%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A K  D +P  +V   N  I  L R+G  E+AL +   + ++G      +  +V +  + 
Sbjct: 52  AEKSPDWVPTSDV---NLHIQRLCRSGDLEEALGL---LGSDGV--DDRSYGAVLQLCSE 103

Query: 133 LLDVEHGRRCHGLVIKIGLDKNI---YVANALLSLYAKCGWTKHAVPVFEEMSEPNEV-T 188
           +  +E G+R H LV    L ++     +   L+ +Y KCG  ++A  VF+EM + ++V  
Sbjct: 104 VRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRV 163

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           +TA+MSG AK   + E + +FR M    V  D+ ++S VL   A  G G   D       
Sbjct: 164 WTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIA--GLGSIED------- 214

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                  G+ VH L  KLGF +   + N+L+  YAK+     A ++F  +P R V+SWN 
Sbjct: 215 -------GEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNS 267

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VRSG 352
           MI+G        KAIEL  RM   G E D  T +++L AC                V++G
Sbjct: 268 MISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTG 327

Query: 353 -------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                              D ++  ++F +M   +V SW AM++SY+++  + +   LF+
Sbjct: 328 FISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQ 387

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           EM   G +PD   +   L + A   +L+ GK VH  +++        V + L+ +Y KC 
Sbjct: 388 EMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCG 447

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
             E A+ +F  +   D++ WN++I G S N+L  EAF  F +M   ++ P   +   +L 
Sbjct: 448 NMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLL-QLRPNAVTMTCILP 506

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           + A LSS  +GR++HA   + GY+ D FV +ALI+MY KCG +  AR+ FD +  KN ++
Sbjct: 507 AAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLIS 566

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W  M+ GY  +G G +A+ L++ M  SG+ PD  +F AIL ACSHSGL D G   F++M+
Sbjct: 567 WTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMR 626

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
            +H +EP L HYTCM+D L   G+  EA   ID MP + D  IW  LL  CR+H NV+LA
Sbjct: 627 KEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLA 686

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
           +  AE +F L+P+N+  Y LLANIY+   RW+ +R ++
Sbjct: 687 EEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLK 724



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 170/622 (27%), Positives = 282/622 (45%), Gaps = 98/622 (15%)

Query: 1   KKAHVAGKLLHAHIL-RNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH-KDIYSWN 58
           K+AH    L+ A  L R+G+  D  L  +L+ +Y KC +  +A+ +FD+MP   D+  W 
Sbjct: 111 KRAHF---LVRASSLGRDGM--DNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWT 165

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
           A++S   K+ DL     LF                                KM   G  P
Sbjct: 166 ALMSGYAKAGDLREGVLLF-------------------------------RKMHCCGVRP 194

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
              T++ V K    L  +E G   HGL+ K+G      V NAL++ YAK   TK A+ VF
Sbjct: 195 DAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVF 254

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           + M   + +++ +M+SG        +A+E+F  M  +   +DS +L SVL  CA      
Sbjct: 255 DGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACA------ 308

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                     +      G+ VH  ++K GF +   L+N LLDMY+   D  S   IF N+
Sbjct: 309 ----------ELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNM 358

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD--EVTS--------------- 341
            +++VVSW  MI  Y +     K   L Q M   G  PD   +TS               
Sbjct: 359 VQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGK 418

Query: 342 ---------------------INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                                + M V C   G+++  + +FD + S  + SWN ++  YS
Sbjct: 419 SVHGYAIRNGMEKVLAVTNALMEMYVKC---GNMEEAKLIFDGVVSKDMISWNTLIGGYS 475

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           ++    EA  LF EM  + ++P+  T+  IL + A++  LE G+++HA +L+     D++
Sbjct: 476 RNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDF 534

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           VA+ LI +Y KC    LA R+F R+   +++ W  M+AG  ++    +A   F+QMR + 
Sbjct: 535 VANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSG 594

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDIYGA 559
           + P   SF+ +L +C+      +G +    + K+  +       + ++++    G++  A
Sbjct: 595 IAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEA 654

Query: 560 RQFFDMMH-GKNTVTWNEMIHG 580
            +F D M    ++  W  ++ G
Sbjct: 655 YEFIDSMPIEPDSSIWVSLLRG 676



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 212/464 (45%), Gaps = 57/464 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H + ++ G    T L N L+++YS C++  S                         
Sbjct: 316 GRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTN----------------------- 352

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+F  M ++NVVSW  +I++  R GL +K   ++ +M  EG  P    + S 
Sbjct: 353 --------KIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSA 404

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      ++HG+  HG  I+ G++K + V NAL+ +Y KCG  + A  +F+ +   + 
Sbjct: 405 LHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDM 464

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++  ++ G ++ +   EA  +F  M+ + +  ++V+++ +L   A              
Sbjct: 465 ISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAA-------------- 509

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S    G+++H   ++ G+  D  ++N+L+DMY K G +  A  +F  L  ++++SW
Sbjct: 510 --SLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISW 567

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
            +M+AGYG   +   AI L ++M+  G  PD  +   +L AC  SG    G   FD+M  
Sbjct: 568 TIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRK 627

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +  M+     + N KEA +    M    ++PD +    +L  C     ++
Sbjct: 628 EHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMP---IEPDSSIWVSLLRGCRIHRNVK 684

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
             ++V     +       Y    L  IY++ +R E   ++ ++I
Sbjct: 685 LAEEVAERVFELEPENTGYYVL-LANIYAEAERWEAVRKLKNKI 727


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 250/793 (31%), Positives = 398/793 (50%), Gaps = 103/793 (12%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            G  +HA I +     D  L N L+ +YS C                              
Sbjct: 262  GMQIHAFICKLPCVSDMILSNVLMSMYSDC------------------------------ 291

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG----FVPTHIT 122
            S  ++ A+++FDE+  RN V+WN++IS   R G    A  +++ M  EG      P   T
Sbjct: 292  SGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYT 351

Query: 123  LASVFKASTALLDVEHGRRCHGLVI---------KIGLDKNIYVANALLSLYAKCGWTKH 173
            L S+  A+ +L D        GLV+         K G  +++YV +AL++ +A+ G    
Sbjct: 352  LCSLVTAACSLADC-------GLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDC 404

Query: 174  AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
            A  +F++M + N VT   +M GLA+  +  EA ++F+ M +  V I+S SL  +L     
Sbjct: 405  AKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLVVLL----- 458

Query: 234  EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAE 292
                     F +  N       GQ+VH    + G  +A + + N+L++MY K   +D+A 
Sbjct: 459  -------STFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNAC 511

Query: 293  VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
             +F  +P +  VSWN MI+G     +  +A+     MK  G  P   + I+ L +C   G
Sbjct: 512  SVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLG 571

Query: 353  DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
             +  GR++                                   F  MP     SWN+ + 
Sbjct: 572  WLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIG 631

Query: 378  SYSQSENHK-EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
            + ++ E    +A+K F EM   G +P+R T   IL++ ++  +L  G Q+HA  LK +  
Sbjct: 632  ALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVA 691

Query: 437  IDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
             DN + + L+  Y KC++ E  E +F R+ E  D V WNSMI+G   + +  +A      
Sbjct: 692  DDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWP 751

Query: 496  MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
            M Q       F+FATVLS+CA +++  +G +VHA   +    +D+ VGSAL++MY KCG 
Sbjct: 752  MMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGK 811

Query: 556  IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
            I  A +FF++M  +N  +WN MI GYA++G+G +A++++  M   G  PD +TFV +L+A
Sbjct: 812  IDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSA 871

Query: 616  CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
            CSH GLVD G + F SM   +G+ P ++H++CM+D LGRAG   + E  I  MP   + +
Sbjct: 872  CSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNIL 931

Query: 676  IWEVLLSS-CRLHA-NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
            IW  +L + CR +  N  L +RAA+ L  L+P+N+  Y LL+N++++ G W+D+   R  
Sbjct: 932  IWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLA 991

Query: 734  MSENCIVKDPAYS 746
            M +  + KD   S
Sbjct: 992  MRKAAVKKDAGCS 1004



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 187/751 (24%), Positives = 344/751 (45%), Gaps = 102/751 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH  + + G  DD F CN LI +Y +  N  SA+                          
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSAR-------------------------- 195

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                KLFDEMP++N+VSW+ LIS   +N + ++A S++  + + G +P H  + S  +A
Sbjct: 196 -----KLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRA 250

Query: 130 --STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC-GWTKHAVPVFEEMSEPNE 186
                   ++ G + H  + K+    ++ ++N L+S+Y+ C G    A  VF+E+   N 
Sbjct: 251 CQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNS 310

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI----DSVSLSS-VLGVCAREGCGVESD 241
           VT+ +++S   +    V A ++F +M  + V +    +  +L S V   C+   CG+   
Sbjct: 311 VTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGL--- 367

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                       V  +Q+     K GF  DL++ ++L++ +A+ G MD A++IF  + +R
Sbjct: 368 ------------VLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDR 415

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-- 359
           + V+ N ++ G  +++Q  +A ++ + MK    E +  + + +L       ++K G+   
Sbjct: 416 NAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTFTEFSNLKEGKRKG 474

Query: 360 --------------------------------------MFDSMPSPSVSSWNAMLSSYSQ 381
                                                 +F  MPS    SWN+M+S    
Sbjct: 475 QEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDH 534

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +E  +EA+  F  M+  G+ P   ++   LSSC+++G L  G+Q+H    K    +D  V
Sbjct: 535 NERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSV 594

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI-EAFMFFKQMRQNE 500
           ++ L+ +Y++       ++VF ++PE D V WNS I  L+     + +A  +F +M Q  
Sbjct: 595 SNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAG 654

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
             P + +F  +L++ +  S    G Q+HA I K    +D  + +AL+  Y KC  +    
Sbjct: 655 WRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCE 714

Query: 561 QFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
             F  M   ++ V+WN MI GY  +G   +A+ L   M+  G K D  TF  +L+AC+  
Sbjct: 715 IIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASV 774

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
             ++ G+E+ ++  +   +E  +   + ++D   + G    A    + MP + +   W  
Sbjct: 775 ATLERGMEV-HACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWNS 832

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
           ++S    H +    ++A +   R+     +P
Sbjct: 833 MISGYARHGH---GQKALKIFTRMKQHGQSP 860



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 213/461 (46%), Gaps = 85/461 (18%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTF-LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           K+    G+ +HA++ R+GL D    + N L+ +Y KC    +A  +F  MP KD  SWN+
Sbjct: 468 KEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNS 527

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
                                          +IS L  N   E+A+S ++ M   G VP+
Sbjct: 528 -------------------------------MISGLDHNERFEEAVSCFHTMKRNGMVPS 556

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           + ++ S   + ++L  +  GR+ HG   K GLD ++ V+NALL+LYA+         VF 
Sbjct: 557 NFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFF 616

Query: 180 EMSEPNEVTFTAMMSGLAKTD-RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           +M E ++V++ + +  LAK +  V++AL+ F  M++     + V+  ++L   +      
Sbjct: 617 QMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVS------ 670

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                      FS    G Q+H L +K     D  + N+LL  Y K   M+  E+IFS +
Sbjct: 671 ----------SFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRM 720

Query: 299 PE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
            E R  VSWN MI+GY       KA++L+  M   G + D  T   +L AC     ++ G
Sbjct: 721 SERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERG 780

Query: 358 REM-----------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
            E+                                   F+ MP  ++ SWN+M+S Y++ 
Sbjct: 781 MEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARH 840

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            + ++A+K+F  M+  G  PD  T   +LS+C+ +G+++ G
Sbjct: 841 GHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEG 881



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 228/496 (45%), Gaps = 60/496 (12%)

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
           E D +  S + +  N     +H    K GF  D+   N+L+++Y + G++ SA  +F  +
Sbjct: 146 EFDRYKTSSSLYDAN----HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEM 201

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR-------- 350
           P++++VSW+ +I+GY Q     +A  L + + S G  P+     + L AC +        
Sbjct: 202 PQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKL 261

Query: 351 ------------------------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                                         SG I     +FD +   +  +WN+++S Y 
Sbjct: 262 GMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYC 321

Query: 381 QSENHKEAIKLFREMQFRGV----KPDRTTLAIILSSCAAMGILESG----KQVHAASLK 432
           +  +   A KLF  MQ  GV    +P+  TL  +++  AA  + + G    +Q+     K
Sbjct: 322 RRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVT--AACSLADCGLVLLEQMLTRIEK 379

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
           +    D YV S L+  +++    + A+ +F ++ + + V  N ++ GL+      EA   
Sbjct: 380 SGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKV 439

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSS----SFQGRQVHAQIEKDGYVN-DIFVGSALI 547
           FK+M+      ++ S   +LS+  + S+      +G++VHA + + G V+  I +G+AL+
Sbjct: 440 FKEMKDLVEINSE-SLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALV 498

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
            MY KC  I  A   F +M  K+TV+WN MI G   N   +EAV  +  M  +G+ P + 
Sbjct: 499 NMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNF 558

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           + ++ L++CS  G + +G +I        G++  +     ++         +E + +  +
Sbjct: 559 SVISTLSSCSSLGWLTLGRQIHGE-GFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQ 617

Query: 668 MPCKDDPVIWEVLLSS 683
           MP + D V W   + +
Sbjct: 618 MP-EYDQVSWNSFIGA 632



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 14/286 (4%)

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L     +H    KT    D +  + LI IY +      A ++F  +P+ ++V W+ +I+G
Sbjct: 156 LYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISG 215

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF--QGRQVHAQIEKDGYV 537
            + N +  EA   FK +  + + P  F+  + L +C +  S+    G Q+HA I K   V
Sbjct: 216 YTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCV 275

Query: 538 NDIFVGSALIEMYCKC-GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
           +D+ + + L+ MY  C G I  A + FD +  +N+VTWN +I  Y + G    A +L+  
Sbjct: 276 SDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSV 335

Query: 597 MIASGV----KPDDITFVAILT-ACSHSGLVDVGVEIFNSMQLDHGVEPIL-DHY--TCM 648
           M   GV    +P++ T  +++T ACS   L D G+ +   M         L D Y  + +
Sbjct: 336 MQMEGVELNLRPNEYTLCSLVTAACS---LADCGLVLLEQMLTRIEKSGFLRDLYVGSAL 392

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           ++   R G    A+M+  +M  ++   +  +++   R H     AK
Sbjct: 393 VNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAK 438



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 10/173 (5%)

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           SS +    +H Q+ K G+ +D+F  + LI +Y + G++  AR+ FD M  KN V+W+ +I
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL--VDVGVEIFNSM-QLD 635
            GY QN   DEA  L+K +I+SG+ P+     + L AC   G   + +G++I   + +L 
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLP 273

Query: 636 HGVEPILDHYTCMI--DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS-SCR 685
              + IL +    +  DC   +G   +A  + DE+  ++  V W  ++S  CR
Sbjct: 274 CVSDMILSNVLMSMYSDC---SGSIDDAHRVFDEIKFRNS-VTWNSIISVYCR 322


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/594 (33%), Positives = 330/594 (55%), Gaps = 52/594 (8%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
           N++  N LLS Y+K G+ +    VF+ M   + V++ +++SG A    + E++ ++ +M+
Sbjct: 70  NLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMML 129

Query: 214 RK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
           +  +V+++ ++ S++L + +  G       F        R +HGQ       K G+++ L
Sbjct: 130 KDGSVNLNRITFSTMLILSSNRG-------FVD----LGRQIHGQ-----IFKFGYQSYL 173

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            + + L+DMYAK G ++ A  IF  +PE+++V +N MI G                +  C
Sbjct: 174 FVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITG----------------LLRC 217

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
            F                   I    ++FD+MP     SW  +++  +Q+   KEA+  F
Sbjct: 218 RF-------------------IVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKF 258

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           +EM   G   D+ T   +L++C     L+ GKQ+HA  ++T    + +V S L+ +Y KC
Sbjct: 259 KEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKC 318

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
           +  + AE VF ++   +++ W +M+ G   N    EA   F  M++NE++P  F+  +V+
Sbjct: 319 RNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVI 378

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           SSCA L+S  +G Q H Q    G +  + V +ALI +Y KCG +  A Q F  M  ++ V
Sbjct: 379 SSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEV 438

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +W  ++ GYAQ G  +E + L++ M+A G+ PD +TFV +L+ACS +GLV+ G   F  M
Sbjct: 439 SWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECM 498

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
             +H + PI DHYTCMID L RAG   EA+  I++MP   D + W  LLSSCRL+ N+ +
Sbjct: 499 VKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEI 558

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            K AAE L +L+P+N A Y LL++IY++ G+WDD+  +R+ M E  + K+P +S
Sbjct: 559 GKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHS 612



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 260/535 (48%), Gaps = 65/535 (12%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LH  I+R     +TFL N LI  Y K  +  +A+++FD +P  +++SWN +LSA  K 
Sbjct: 25  KKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKL 84

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP-THITLASV 126
             L+   ++FD MP  +VVSWN+L+S    NGL  +++ VYN M  +G V    IT +++
Sbjct: 85  GYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTM 144

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              S+    V+ GR+ HG + K G    ++V + L+ +YAK G+   A  +FEE+ E N 
Sbjct: 145 LILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNI 204

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
           V +  M++GL +   +VEA ++F  M  K    DS+S ++++    + G   E+ D F +
Sbjct: 205 VVYNTMITGLLRCRFIVEAEQLFDNMPEK----DSISWTTIITGLTQNGLFKEAVDKFKE 260

Query: 246 SD------NKFSRNV------------HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
                   ++F+                G+Q+H   I+  ++ ++ + ++LLDMY K  +
Sbjct: 261 MGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRN 320

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           +  AE +F  +  ++V+SW  M+ GYGQ   S +A+ +   M+     PD+ T  +++ +
Sbjct: 321 VKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISS 380

Query: 348 CV-----------------------------------RSGDIKTGREMFDSMPSPSVSSW 372
           C                                    + G ++   ++F  M      SW
Sbjct: 381 CANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSW 440

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
            A++S Y+Q     E I LF  M   G+ PD  T   +LS+C+  G++E G       +K
Sbjct: 441 TALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVK 500

Query: 433 ---TASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
                   D+Y    +I + S+  R E A+   +++P   D + W ++++   LN
Sbjct: 501 EHRITPIPDHYTC--MIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLN 553



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 212/423 (50%), Gaps = 24/423 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  I + G     F+ + L+++Y+K    + A  +F+++P K+I  +N +++   +
Sbjct: 157 GRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLR 216

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +  A +LFD MPE++ +SW  +I+ L +NGL ++A+  + +M  EGF     T  SV
Sbjct: 217 CRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSV 276

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A    L ++ G++ H  +I+     NI+V +ALL +Y KC   K+A  VF +M   N 
Sbjct: 277 LTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNV 336

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TAM+ G  +     EA+ +F  M R  +  D  +L SV+  CA      E       
Sbjct: 337 ISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEE------- 389

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q H   +  G    + +SN+L+ +Y K G ++ A  +F  +  R  VSW
Sbjct: 390 ---------GAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSW 440

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             +++GY Q  ++ + I L + M + G  PD VT + +L AC R+G ++ G   F+ M  
Sbjct: 441 TALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVK 500

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               +P    +  M+   S++   +EA     +M F    PD    A +LSSC   G LE
Sbjct: 501 EHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPF---SPDAIGWATLLSSCRLNGNLE 557

Query: 422 SGK 424
            GK
Sbjct: 558 IGK 560



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 44/237 (18%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR------- 560
           +   L  C +  +  Q +++H +I +     + F+ + LI  Y K GD+  AR       
Sbjct: 8   YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67

Query: 561 ------------------------QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
                                   + FD M   + V+WN ++ GYA NG   E+VR+Y  
Sbjct: 68  QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127

Query: 597 MIASG-VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
           M+  G V  + ITF  +L   S+ G VD+G +I   +    G +  L   + ++D   + 
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQI-FKFGYQSYLFVGSPLVDMYAKT 186

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSS---CRLHANVRLAKRAAEELFRLDPKNSA 709
           G  ++A  + +E+P K + V++  +++    CR           AE+LF   P+  +
Sbjct: 187 GFINDANRIFEEIPEK-NIVVYNTMITGLLRCRFIVE-------AEQLFDNMPEKDS 235


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 238/730 (32%), Positives = 374/730 (51%), Gaps = 52/730 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           ++Y   A+L        +  A +LF EMPERNVVSW  L+ AL  NG  E+ L  Y +M 
Sbjct: 78  NVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMR 137

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            EG        A+V     +L +   G +    VI  GL   + VAN+L++++   G  +
Sbjct: 138 REGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQ 197

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +F+ M E + ++  AM+S  +      +   +F  M    +  D+ +L S++ VCA
Sbjct: 198 DAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 257

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                        S + FS   HG  +H L ++   ++ + + N+L++MY+  G +  AE
Sbjct: 258 -------------SADHFS---HGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAE 301

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F N+  R ++SWN MI+ Y Q   ST A++ L ++      P+ +T  + L AC   G
Sbjct: 302 FLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPG 361

Query: 353 DIKTGR-----------------------------------EMFDSMPSPSVSSWNAMLS 377
            +  G+                                   ++F SMP+  V S+N ++ 
Sbjct: 362 ALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIG 421

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES-GKQVHAASLKTASH 436
            Y+  E+  +A+++F  ++  G+KP+  T+  I  S  +   L + G+ +HA  ++T   
Sbjct: 422 GYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFL 481

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D YVA+ LI +Y+KC   E +  +F+ I   +IV WN++IA  +      EA   F  M
Sbjct: 482 SDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDM 541

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           +       +   A  LSSCA L+S  +G Q+H    K G  +D +V +A ++MY KCG +
Sbjct: 542 QHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKM 601

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
               Q       +    WN +I GYA+ GY  EA   +K M+A G KPD +TFVA+L+AC
Sbjct: 602 NEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSAC 661

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH+GLVD G++ +NSM    GV P + H  C++D LGR G F EAE  I+EMP   + +I
Sbjct: 662 SHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLI 721

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W  LLSS R H N+ + ++AA++L  LDP + + Y LL+N+Y++  RW D+  +R  M  
Sbjct: 722 WRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKT 781

Query: 737 NCIVKDPAYS 746
             I K PA S
Sbjct: 782 ININKRPACS 791



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 176/667 (26%), Positives = 302/667 (45%), Gaps = 71/667 (10%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEH- 138
           MP+R   +W   +S  VR G +  A  +   M   G   +   LAS+  A       E  
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 139 --GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
             G   H L  + GL  N+Y+  ALL LY   G    A  +F EM E N V++TA+M  L
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVAL 120

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           +    + E L  +R M R+ V  ++ + ++V+ +C                      V G
Sbjct: 121 SSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCG----------------SLENEVPG 164

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
            QV    I  G +  + ++NSL+ M+   G +  AE +F  + E   +S N MI+ Y  +
Sbjct: 165 LQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQ 224

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR-------------------------- 350
              +K   +   M+  G  PD  T  +++  C                            
Sbjct: 225 GICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVI 284

Query: 351 ---------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                    +G +     +F +M    + SWN M+SSY Q+ N  +A+K   ++      
Sbjct: 285 NALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEI 344

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P+  T +  L +C++ G L  GK VHA  L+ +   +  V + LI +Y KC   E AE+V
Sbjct: 345 PNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKV 404

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F  +P  D+V +N +I G ++     +A   F  +R   + P   ++ T+++     +SS
Sbjct: 405 FQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKP---NYITMINIHGSFTSS 461

Query: 522 FQ----GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
                 GR +HA I + G+++D +V ++LI MY KCG++  +   F+ +  KN V+WN +
Sbjct: 462 NDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAI 521

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I   AQ G+G+EA++L+ DM  +G K D +     L++C+    ++ G+++ + + +  G
Sbjct: 522 IAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQL-HGLGMKSG 580

Query: 638 VEPILDHYT--CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           ++   D Y     +D  G+ G  +E   ++ +   +     W  L+S    +       +
Sbjct: 581 LDS--DSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQC-WNTLISGYAKYGYF----K 633

Query: 696 AAEELFR 702
            AEE F+
Sbjct: 634 EAEETFK 640



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 253/552 (45%), Gaps = 91/552 (16%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G  + +H++ +GL +   + N LI ++        A+ LFD+M   D  S NA     
Sbjct: 162 VPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNA----- 216

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +IS     G+  K   V++ M + G  P   TL 
Sbjct: 217 --------------------------MISMYSHQGICSKCFLVFSDMRHHGLRPDATTLC 250

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+     +     HG   H L ++  LD ++ V NAL+++Y+  G    A  +F  MS  
Sbjct: 251 SLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRR 310

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + +++  M+S   +     +AL+    +       + ++ SS LG C+  G  ++     
Sbjct: 311 DLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALID----- 365

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+ VH + ++L  + +L + NSL+ MY K   M+ AE +F ++P   VV
Sbjct: 366 -----------GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVV 414

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN--------------------- 343
           S+NV+I GY      TKA+++   ++S G +P+ +T IN                     
Sbjct: 415 SYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAY 474

Query: 344 ---------------MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                          ++    + G++++   +F+S+ + ++ SWNA++++ +Q  + +EA
Sbjct: 475 IIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEA 534

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           +KLF +MQ  G K DR  LA  LSSCA++  LE G Q+H   +K+    D+YV +  + +
Sbjct: 535 LKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDM 594

Query: 449 YSKCQR-NELAERVFHRIPELDI---VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           Y KC + NE+ + V    P+  I    CWN++I+G +      EA   FKQM      P 
Sbjct: 595 YGKCGKMNEMLQMV----PDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPD 650

Query: 505 QFSFATVLSSCA 516
             +F  +LS+C+
Sbjct: 651 YVTFVALLSACS 662



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 201/429 (46%), Gaps = 56/429 (13%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + GK++HA +L+  L  +  + N LI +Y KCN+   A+ +F  MP  D+ S+N ++ 
Sbjct: 362 ALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIG 421

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                          A++ +G   KA+ V++ + + G  P +IT
Sbjct: 422 GY-----------------------------AVLEDG--TKAMQVFSWIRSAGIKPNYIT 450

Query: 123 LASVFKASTALLDV-EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           + ++  + T+  D+  +GR  H  +I+ G   + YVAN+L+++YAKCG  + +  +F  +
Sbjct: 451 MINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSI 510

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           +  N V++ A+++  A+     EAL++F  M      +D V L+  L  CA         
Sbjct: 511 TNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCA--------- 561

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    +    G Q+H L +K G ++D ++ N+ +DMY K G M+    +  +   R
Sbjct: 562 -------SLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIR 614

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
               WN +I+GY +     +A E  ++M + G +PD VT + +L AC  +G +  G + +
Sbjct: 615 PQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYY 674

Query: 362 DSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           +SM      SP +     ++    +     EA +   EM    V P+      +LSS   
Sbjct: 675 NSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMP---VLPNDLIWRSLLSSSRT 731

Query: 417 MGILESGKQ 425
              LE G++
Sbjct: 732 HKNLEIGRK 740


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 226/699 (32%), Positives = 370/699 (52%), Gaps = 56/699 (8%)

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGF-VPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           NN+I     +G  + A+ VY KM ++G  V        + KA   L DV  GR+ HG V+
Sbjct: 77  NNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVL 136

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
           K+G+  ++ V N+LL++Y KCG  + AV +FE+M E + V++  M+SG  K+     +L 
Sbjct: 137 KLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLM 196

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
            FR M+ +             G+       V S +   S    +   HG+++H + +K G
Sbjct: 197 FFRSMVWE------------FGIYPNRVACVSSILSCSSLQSLT---HGREIHGVVVKSG 241

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE-----RSVVSWNVMIAGYGQKYQSTKA 322
            + + +L +SL++MY K G + +AE IF+++ +     R+ V WNVMI+GY      ++A
Sbjct: 242 LDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQA 301

Query: 323 IELLQRMKSCGFEPDEVTSINMLVAC---------------------------------- 348
           + L  +M   G +PD  T +++   C                                  
Sbjct: 302 LLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDM 361

Query: 349 -VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
            ++ GD+ TG ++F    + ++  W+A++S+ +QS    +A++LF E +      D   L
Sbjct: 362 YLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGIL 421

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
             +L +C+++ +   G Q+H  + K     D +V S L+ +Y+KC+    +++VF R+ +
Sbjct: 422 VAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQ 481

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            D+V WN++I+G + +    EA   F+ M+  E+ P   + A +LS CA LS     ++V
Sbjct: 482 KDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEV 541

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H  + + G  + + V ++LI  Y KCGDI  +   F+ M  +N V+WN +I G   +   
Sbjct: 542 HGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRT 601

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
           DE + L+  M+ASG+KPD +TF AIL+ACSH+G VD G + F SM  D  ++P L+ YTC
Sbjct: 602 DEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTC 661

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
           M+D LGRAGH ++A  LI  MPC  D  IW  LL SC+ H +  LA+  A  +F+L P +
Sbjct: 662 MVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSS 721

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
                LLAN+Y +LG+  +   VR  + +  + K P  S
Sbjct: 722 VGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCS 760



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 208/452 (46%), Gaps = 77/452 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  ++++GL  + +L + LIE+Y KC +  +A+++F+ +  KD             
Sbjct: 230 GREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSV----------- 278

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                           RN V WN +IS  V NG   +AL ++ KM   G  P + T+ S+
Sbjct: 279 ---------------RRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSL 323

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F   +  LD+  G++ HGL+ K GL  NI V  ALL +Y KCG     + +F      N 
Sbjct: 324 FSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNL 383

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           + ++A++S  A++    +ALE+F     +    DS  L +VL  C+              
Sbjct: 384 IMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACS-------------- 429

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G Q+H L  K+GF +D+ + ++L+D+YAK  DM  ++ +F  L ++ +VSW
Sbjct: 430 --SLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSW 487

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           N +I+GY Q   + +A++  + M+     P+ VT   +L  C                  
Sbjct: 488 NALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIR 547

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + GDI +    F+ MP  +  SWN+++          E I L
Sbjct: 548 QGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVL 607

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           F +M   G+KPD  T   ILS+C+  G ++ G
Sbjct: 608 FDKMVASGIKPDHVTFTAILSACSHAGRVDEG 639



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 194/404 (48%), Gaps = 35/404 (8%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYSW---------NAILSAQCKSDDLEFAYKLFDE 79
           ++ L+S C  + S    F K  H  I+ +          A+L    K  D+    K+F  
Sbjct: 320 MVSLFSLC--SESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRR 377

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
               N++ W+ +IS   ++G   KAL ++ +   E  +     L +V +A ++L     G
Sbjct: 378 SQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEG 437

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
            + HGL  K+G   +++V +AL+ LYAKC    ++  VF  +S+ + V++ A++SG A+ 
Sbjct: 438 MQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQD 497

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
           +   EAL+ FR M  + +  ++V+++ +L VCA                  S     ++V
Sbjct: 498 ECADEALKAFRDMQLEEIRPNTVTIACILSVCAH----------------LSVMTLCKEV 541

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H   I+ G  + + +SNSL+  YAK GD++S+   F  +PER+ VSWN +I G G   ++
Sbjct: 542 HGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRT 601

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNA 374
            + I L  +M + G +PD VT   +L AC  +G +  G + F SM       P +  +  
Sbjct: 602 DEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTC 661

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           M+    ++ +  +A  L   M      PD      +L SC   G
Sbjct: 662 MVDLLGRAGHLNQAYDLIMAMP---CTPDDRIWGSLLGSCKNHG 702



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 165/324 (50%), Gaps = 9/324 (2%)

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR-TTLAIILSSCAAMGILESGKQV 426
           SVS  N ++  Y++     +AI ++ +M   GVK +       ++ +   +  +  G+Q+
Sbjct: 72  SVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQI 131

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H   LK     D  V + L+ +Y KC   E A ++F ++PE+D+V WN+MI+G   +   
Sbjct: 132 HGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDY 191

Query: 487 IEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             + MFF+ M  +  +YP + +  + + SC+ L S   GR++H  + K G   + ++ S+
Sbjct: 192 TRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSS 251

Query: 546 LIEMYCKCGDIYGARQFFDMMHGK-----NTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           LIEMY KCG I  A   F+ +  K     N V WN MI GY  NG   +A+ L+  M+  
Sbjct: 252 LIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVW 311

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G+KPD  T V++ + CS S  +  G +I + +    G++  +   T ++D   + G    
Sbjct: 312 GIKPDYSTMVSLFSLCSESLDIAFGKQI-HGLIFKFGLKNNIRVETALLDMYLKCGDMGT 370

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSC 684
             + I       + ++W  ++S+C
Sbjct: 371 G-LKIFRRSQNHNLIMWSAVISNC 393



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 54/326 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H    + G   D F+ + L++LY+KC                              
Sbjct: 437 GMQIHGLATKMGFVSDVFVGSALVDLYAKCR----------------------------- 467

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+ ++ K+F  + ++++VSWN LIS   ++   ++AL  +  M  E   P  +T+A +
Sbjct: 468 --DMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACI 525

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 L  +   +  HG +I+ GL   + V+N+L++ YAKCG    ++  FE+M E N+
Sbjct: 526 LSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERND 585

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-----EGCGVESD 241
           V++ +++ G+    R  E + +F  M+   +  D V+ +++L  C+      EGC     
Sbjct: 586 VSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKS 645

Query: 242 VFAQSDNK------------FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
           +    + K              R  H  Q + L + +    D  +  SLL     +GD  
Sbjct: 646 MVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEI 705

Query: 290 SAEV----IFSNLPERSVVSWNVMIA 311
            AE+    IF  +P  S V + V++A
Sbjct: 706 LAEIVANHIFKLVP--SSVGYRVLLA 729


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/677 (32%), Positives = 356/677 (52%), Gaps = 61/677 (9%)

Query: 111 MSNEGFVPTHITLASVFKASTALL-----DVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
           +S   ++P     A+V++   ALL      ++  R    L+ K GL +       L+SL+
Sbjct: 25  LSQRNYIP-----ANVYEHPAALLLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLF 79

Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
            + G    A  VFE + +   V +  M+ G AK   + +AL+ F  M    V     + +
Sbjct: 80  CRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFT 139

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
            +L VC  E    E  V             G+++H L +K GF  DL     L +MYAK 
Sbjct: 140 YLLKVCGDEA---ELRV-------------GKEIHGLLVKSGFSLDLFAMTGLENMYAKC 183

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
             +  A  +F  +PER +VSWN ++AGY Q   +  A+E++  M     +P  +T +++L
Sbjct: 184 RQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVL 243

Query: 346 VAC-----------------------------------VRSGDIKTGREMFDSMPSPSVS 370
            A                                     + G +KT R +FD M   +V 
Sbjct: 244 PAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVV 303

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           SWN+M+ +Y Q+EN KEA+ +F++M   GVKP   ++   L +CA +G LE G+ +H  S
Sbjct: 304 SWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
           ++     +  V + LI +Y KC+  + A  +F ++    IV WN+MI G + N   IEA 
Sbjct: 364 VELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEAL 423

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
            +F QM+   + P  F++ +V+++ A+LS +   + +H  + ++    ++FV +AL++MY
Sbjct: 424 NYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMY 483

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            KCG I  AR  FDMM  ++  TWN MI GY  +G G  A+ L+++M    ++P+ +TF+
Sbjct: 484 AKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFL 543

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
           ++++ACSHSGLV+ G++ F+ M+ ++ +EP +DHY  M+D LGRAG  +EA   I +MP 
Sbjct: 544 SVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPV 603

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
           K    ++  +L +C++H NV  A++ AE LF L+P++   + LLANIY +   W+ +  V
Sbjct: 604 KPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQV 663

Query: 731 RELMSENCIVKDPAYSL 747
           R  M    + K P  S+
Sbjct: 664 RVSMLRQGLRKTPGCSM 680



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 249/524 (47%), Gaps = 55/524 (10%)

Query: 32  LYSKCNNTHSAQHLFDKMPHKDIYS----WNAILSAQCKSDDLEFAYKLFDEMPERNVVS 87
           L  +C++    +H+   +    +Y        ++S  C+   ++ A ++F+ + ++  V 
Sbjct: 43  LLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVL 102

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           +  ++    +    +KAL  + +M ++   P       + K      ++  G+  HGL++
Sbjct: 103 YYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
           K G   +++    L ++YAKC     A  VF+ M E + V++  +++G ++      ALE
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           M  LM  + +    +++ SVL               A S  +  R   G+++H   ++ G
Sbjct: 223 MVNLMCEENLKPSFITIVSVLP--------------AVSALRLIRI--GKEIHGYAMRAG 266

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F++ ++++ +L+DMYAK G + +A ++F  + ER+VVSWN MI  Y Q     +A+ + Q
Sbjct: 267 FDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQ 326

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGR----------------------------- 358
           +M   G +P +V+ +  L AC   GD++ GR                             
Sbjct: 327 KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCK 386

Query: 359 ------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                  MF  + S ++ SWNAM+  ++Q+    EA+  F +MQ R VKPD  T   +++
Sbjct: 387 EVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVIT 446

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           + A + I    K +H   ++     + +V + L+ +Y+KC    +A  +F  + E  +  
Sbjct: 447 AIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTT 506

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
           WN+MI G   + +   A   F++M++  + P   +F +V+S+C+
Sbjct: 507 WNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACS 550



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 215/452 (47%), Gaps = 82/452 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++++G   D F    L  +Y+KC   H A+                       
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEAR----------------------- 190

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+FD MPER++VSWN +++   +NG+   AL + N M  E   P+ IT+ SV
Sbjct: 191 --------KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSV 242

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A +AL  +  G+  HG  ++ G D  + +A AL+ +YAKCG  K A  +F+ M E N 
Sbjct: 243 LPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNV 302

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +M+    + +   EA+ +F+ M+ + V    VS+   L  CA  G           
Sbjct: 303 VSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLG----------- 351

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                R   G+ +H L+++L  + ++ + NSL+ MY K  ++D+A  +F  L  R++VSW
Sbjct: 352 --DLER---GRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSW 406

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA------------------- 347
           N MI G+ Q  +  +A+    +M++   +PD  T ++++ A                   
Sbjct: 407 NAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466

Query: 348 -CV---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
            C+               + G I   R +FD M    V++WNAM+  Y      K A++L
Sbjct: 467 NCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALEL 526

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           F EMQ   ++P+  T   ++S+C+  G++E+G
Sbjct: 527 FEEMQKGTIRPNGVTFLSVISACSHSGLVEAG 558



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 198/413 (47%), Gaps = 55/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H + +R G      +   L+++Y+KC +                            
Sbjct: 255 GKEIHGYAMRAGFDSLVNIATALVDMYAKCGS---------------------------- 286

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A  LFD M ERNVVSWN++I A V+N   ++A+ ++ KM +EG  PT +++   
Sbjct: 287 ---LKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGA 343

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L D+E GR  H L +++ LD+N+ V N+L+S+Y KC     A  +F ++     
Sbjct: 344 LHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTI 403

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ AM+ G A+  R +EAL  F  M  + V  D+ +  SV+   A              
Sbjct: 404 VSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIA-------------- 449

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             + S   H + +H + ++   + ++ ++ +L+DMYAK G +  A +IF  + ER V +W
Sbjct: 450 --ELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW 507

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N MI GYG       A+EL + M+     P+ VT ++++ AC  SG ++ G + F  M  
Sbjct: 508 NAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKE 567

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                PS+  + AM+    ++    EA     +M    VKP       +L +C
Sbjct: 568 NYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMP---VKPAVNVYGAMLGAC 617



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 32/202 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            K +H  ++RN L  + F+   L+++Y+KC                      AI+ A+  
Sbjct: 457 AKWIHGVVMRNCLDKNVFVTTALVDMYAKCG---------------------AIMIARL- 494

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +FD M ER+V +WN +I     +G+ + AL ++ +M      P  +T  SV
Sbjct: 495 ---------IFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSV 545

Query: 127 FKASTALLDVEHGRRC-HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A +    VE G +C H +     ++ ++    A++ L  + G    A     +M    
Sbjct: 546 ISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605

Query: 186 EVTFTAMMSGLAKTDRVVEALE 207
            V     M G  +  + V   E
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAE 627


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 223/661 (33%), Positives = 356/661 (53%), Gaps = 54/661 (8%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T   V KA    L V+ GR  HG+V K+G D +++V N LL  Y  CG  K    VF+EM
Sbjct: 9   TFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEM 68

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            E + V++ +++   +      EA+ +F  + +R     + VS+ SVL VCA    G+E 
Sbjct: 69  LERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA----GLED 124

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                        V G+Q+HC  +K G ++ + + N+L+D+Y K G +  +  +F  + E
Sbjct: 125 ------------GVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISE 172

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------- 349
           R+ VSWN +I       ++  A+E+ + M   G +P+ VT  +ML   V           
Sbjct: 173 RNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEI 232

Query: 350 -----RSG---DI-----------KTGREM-----FDSMPSPSVSSWNAMLSSYSQSENH 385
                R G   DI           K+GR +     F+ +   ++ SWNAM+++++Q+   
Sbjct: 233 HGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLE 292

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
             A+ L R+MQ  G  P+  T   +L +CA +G L  GK++HA +++T S +D +V++ L
Sbjct: 293 LAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNAL 352

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
             +Y+KC    LA RVF +I   D V +N +I G S  +   E+   F +M    M    
Sbjct: 353 TDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDV 411

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            S+  V+S+CA L++  QG++VH    +      +F+ +AL++ Y KCG I  A + F  
Sbjct: 412 VSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQ 471

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  ++T +WN MI GY   G    A+ L++ M   GV+ D ++++A+L+ACSH GLV+ G
Sbjct: 472 IPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEG 531

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            + F  MQ+ + ++P   HY CM+D LGRAG   EA  LI+ +P + D  +W  LL +CR
Sbjct: 532 KKYFEHMQVQN-IKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACR 590

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
           +H  + LA  AAE LF+L P++S  YS+L+N+Y+  G+WD+   VR+LM      K+P  
Sbjct: 591 IHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGC 650

Query: 746 S 746
           S
Sbjct: 651 S 651



 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 198/713 (27%), Positives = 344/713 (48%), Gaps = 135/713 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  + + G   D F+ N L+  Y  C               KD+            
Sbjct: 26  GREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGL------------KDVK----------- 62

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITLAS 125
                   ++FDEM ER+VVSWN++I     +G   +A+ ++ +M+   GF P  +++ S
Sbjct: 63  --------RVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVS 114

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V      L D   GR+ H  V+K GLD  + V NAL+ +Y KCG+ K +  VF+E+SE N
Sbjct: 115 VLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERN 174

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ A+++ LA  +R  +ALEMFRLMI   V  +SV+ SS+L V       VE  +F  
Sbjct: 175 GVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVL------VELKLFD- 227

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+++H  +++ G E+D+ ++N+L+DMYAK+G    A  +F+ + E+++VS
Sbjct: 228 ---------FGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVS 278

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
           WN M+A + Q      A++L+++M++ G  P+ VT  N+L AC R G ++ G+E+     
Sbjct: 279 WNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAI 338

Query: 361 -----FDSMPSPSVS------------------------SWNAMLSSYSQSENHKEAIKL 391
                 D   S +++                        S+N ++  YSQ+ N  E+++L
Sbjct: 339 RTGSSVDLFVSNALTDMYAKCGCLNLARRVFKISLRDEVSYNILIIGYSQTTNCSESLRL 398

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F EM  +G+K D  +   ++S+CA +  L+ GK+VH  +++   H   ++A+ L+  Y K
Sbjct: 399 FLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIK 458

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C R +LA +VF +IP  D   WNSMI G  +      A   F+ M+++ +     S+  V
Sbjct: 459 CGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAV 518

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS+C+           H  + ++G                        +++F+ M  +N 
Sbjct: 519 LSACS-----------HGGLVEEG------------------------KKYFEHMQVQNI 543

Query: 572 ----VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV--- 624
               + +  M+    + G  +EAV+L + +    ++PD   + A+L AC   G +++   
Sbjct: 544 KPTQMHYACMVDLLGRAGLIEEAVKLIESL---PIEPDANVWGALLGACRIHGYIELAHW 600

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM---LIDEMPCKDDP 674
             E    ++  H       +Y+ + +    AG + EA     L+     K +P
Sbjct: 601 AAEHLFKLKPQHS-----GYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNP 648



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/519 (26%), Positives = 236/519 (45%), Gaps = 102/519 (19%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +H ++++ GL     + N L+++Y KC     ++ +FD++  ++  SWNAI+++ 
Sbjct: 126 VTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITS- 184

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                   AY       ERN                 + AL ++  M + G  P  +T +
Sbjct: 185 -------LAY------LERN-----------------QDALEMFRLMIDGGVKPNSVTFS 214

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+      L   + G+  HG  ++ GL+ +I+VANAL+ +YAK G +  A  VF ++ E 
Sbjct: 215 SMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEK 274

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++ AM++  A+    + A+++ R M       +SV+ ++VL  CAR G         
Sbjct: 275 NIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIG--------- 325

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                F R   G+++H   I+ G   DL +SN+L DMYAK G ++ A  +F  +  R  V
Sbjct: 326 -----FLRP--GKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEV 377

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----- 359
           S+N++I GY Q    ++++ L   M   G + D V+ + ++ AC     +K G+E     
Sbjct: 378 SYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLA 437

Query: 360 ------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                         +F  +PS   +SWN+M+  Y        AI
Sbjct: 438 VRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAI 497

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---------VHAASLKTASHIDNY 440
            LF  M+  GV+ D  +   +LS+C+  G++E GK+         +    +  A  +D  
Sbjct: 498 NLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVDLL 557

Query: 441 VASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
             +GLI         E A ++   +P E D   W +++ 
Sbjct: 558 GRAGLI---------EEAVKLIESLPIEPDANVWGALLG 587



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 167/337 (49%), Gaps = 7/337 (2%)

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           GV+ D  T   +L +CA    ++ G+++H    K     D +V + L+  Y  C   +  
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR-QNEMYPTQFSFATVLSSCAK 517
           +RVF  + E D+V WNS+I   S++    EA   F +M  ++   P   S  +VL  CA 
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           L     GRQ+H  + K G  + + VG+AL+++Y KCG +  +R+ FD +  +N V+WN +
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I   A      +A+ +++ MI  GVKP+ +TF ++L       L D G EI +   L  G
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEI-HGFSLRFG 240

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           +E  +     +ID   ++G   +A  + +++  K + V W  ++++    A  RL   A 
Sbjct: 241 LESDIFVANALIDMYAKSGRSLQASNVFNQIGEK-NIVSWNAMVAN---FAQNRLELAAV 296

Query: 698 EELFRLDPKNSAPYSL-LANIYSSLGRWDDLRAVREL 733
           + + ++      P S+   N+  +  R   LR  +E+
Sbjct: 297 DLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEI 333


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/786 (29%), Positives = 397/786 (50%), Gaps = 94/786 (11%)

Query: 7   GKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ +H  +  +  L +D  LC R+I +YS C +   ++ +FD +  K+++          
Sbjct: 100 GRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQ--------- 150

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLA 124
                                 WN +IS+  RN L    L ++ KM  E G +P + T  
Sbjct: 151 ----------------------WNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFP 188

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            V KA   + +V+ G   HGLV+K  L ++++V+NAL+S Y   G    A+ VF+ M E 
Sbjct: 189 CVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPER 248

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRK----AVSIDSVSLSSVLGVCAREG-CGVE 239
           N V++ +M+   +      E   +   M+ K    A + D  +L++VL VCAR+   GV 
Sbjct: 249 NLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGV- 307

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                           G+ VH L +KL  + ++ ++N+L+DMY+K G ++ A+VIF    
Sbjct: 308 ----------------GKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNN 351

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG--FEPDEVTSINMLVAC--------- 348
            ++VVSWN M+ G+       K  +LL++M + G     DEVT +N +  C         
Sbjct: 352 NKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNL 411

Query: 349 ---------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                                       + G +     +F S+ S +V+SWNA++  YSQ
Sbjct: 412 KELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQ 471

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           S + + ++  + +M+  G+ PD  T+  +LS+C+ +  L+ GK+VH   ++     D++V
Sbjct: 472 SSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFV 531

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
              L+ +Y  C     A  +F  + +  +V WN+M+ G   N     A   F+QM    +
Sbjct: 532 YISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGV 591

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P + S  +V  +C+ L S   GR+ H    K    ++ F+  ++I+MY K G +  + +
Sbjct: 592 QPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFK 651

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F+ +  ++  +WN M+ GY  +G   EA++L+++M  +G  PD++TF+ +LTAC+HSGL
Sbjct: 652 VFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGL 711

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA-EMLIDEMPCKDDPVIWEVL 680
           V  G+   + M+   G+ P L HY C+ID L RAG   EA ++  +EM  +    IW  L
Sbjct: 712 VHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFL 771

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           LSSCR+H N+ + ++ A +LF  +P+    Y LL+N+Y+  G+WD++R VR+ M E  + 
Sbjct: 772 LSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLR 831

Query: 741 KDPAYS 746
           KD   S
Sbjct: 832 KDAGCS 837



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 264/555 (47%), Gaps = 66/555 (11%)

Query: 110 KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKC 168
           K S++ F+     L  + +AS    D++ GR+ H LV +   L  +  +   ++++Y+ C
Sbjct: 71  KSSSDAFLLLREALGLLLQASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMC 130

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI-DSVSLSSV 227
           G    +  VF+ + + N   + A++S  ++ +     LEMF  MI ++  + D+ +   V
Sbjct: 131 GSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCV 190

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           +  CA    GV S+V             G  VH L +K     D+ +SN+L+  Y  NG 
Sbjct: 191 VKACA----GV-SEVQV-----------GLAVHGLVVKTRLVEDVFVSNALVSFYGTNGS 234

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM----KSCGFEPDEVTSIN 343
           +  A  +F  +PER++VSWN MI  +     S +   LL +M        F PD  T   
Sbjct: 235 VSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLAT 294

Query: 344 MLVACVRSGDIKTGRE-----------------------------------MFDSMPSPS 368
           +L  C R  +I  G+                                    +F    + +
Sbjct: 295 VLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKN 354

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRG--VKPDRTTLAIILSSCAAMGILESGKQV 426
           V SWN M+  +S + +  +   L R+M   G  ++ D  T+   +  C    +L + K++
Sbjct: 355 VVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKEL 414

Query: 427 HAASLKTA-SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS- 484
           H  SLK    H +  VA+  +  Y+KC     A RVF  I    +  WN++I G S +S 
Sbjct: 415 HCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSD 474

Query: 485 --LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
             L ++A+    QM+ + + P  F+  ++LS+C+++ S   G++VH  I ++    D FV
Sbjct: 475 PRLSLDAYF---QMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFV 531

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
             +L+ +Y  CG++  A   FD M  K  V+WN M++GY QNG+ + A+ L++ M+  GV
Sbjct: 532 YISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGV 591

Query: 603 KPDDITFVAILTACS 617
           +P +I+ +++  ACS
Sbjct: 592 QPCEISMMSVFGACS 606


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 219/736 (29%), Positives = 374/736 (50%), Gaps = 91/736 (12%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D++   A+++   K   +  A  LFD MP R+VV WN ++ A V  G  ++ L +++   
Sbjct: 156 DVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFH 215

Query: 113 NEGFVPTHITLASVF----KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC 168
             G  P  +++ ++     K +    ++E  R     +     D ++ V N  LS Y + 
Sbjct: 216 RSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQA 275

Query: 169 G--WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS 226
           G  W                                 EA++ FR MI+  V  DS++   
Sbjct: 276 GEGW---------------------------------EAVDCFRDMIKSRVPCDSLTYIV 302

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           +L V A             S N       G+Q+H   ++ G++  + ++NS ++MY K G
Sbjct: 303 ILSVVA-------------SLNHLEL---GKQIHGAVVRFGWDQFVSVANSAINMYVKAG 346

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
            ++ A  +F  + E  ++SWN +I+G  +      ++ L   +   G  PD+ T  ++L 
Sbjct: 347 SVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLR 406

Query: 347 ACV------------------------------------RSGDIKTGREMFDSMPSPSVS 370
           AC                                     + G ++    +F +     ++
Sbjct: 407 ACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLA 466

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           SWNAM+  ++ S+N++EA++LF  M  RG K D+ T A    +   +  L+ GKQ+HA  
Sbjct: 467 SWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVV 526

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
           +K   H D +V SG++ +Y KC   + A +VF++IP  D V W ++I+G   N  + +A 
Sbjct: 527 IKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQAL 586

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             + QMR   + P +++FAT++ +C+ L++  QG+Q+HA I K     D FV ++L++MY
Sbjct: 587 FTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMY 646

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            KCG+I  A   F  M+ ++   WN MI G AQ+G  +EA+  + +M + GV PD +TF+
Sbjct: 647 AKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFI 706

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
            +L+ACSHSGL     + F+SMQ  +GVEP ++HY+C++D L RAGH  EAE ++  MP 
Sbjct: 707 GVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPF 766

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
           +    ++  LL++CR+  +    +R AE+LF +DP +SA Y LL+NIY++  +W++  + 
Sbjct: 767 EASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSA 826

Query: 731 RELMSENCIVKDPAYS 746
           R +M    + K+P +S
Sbjct: 827 RNMMKRVNVKKEPGFS 842



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 189/705 (26%), Positives = 331/705 (46%), Gaps = 64/705 (9%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH--KDIYSWNAILS 62
           + GK  HA I+ +GL  D ++ N LI +Y+KC +  SA+ LFD  P   +D+ ++NAIL+
Sbjct: 30  ILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILA 89

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
           A   + +L    K                           +A  ++  +     + T  T
Sbjct: 90  AYAHTGELHDVEK-------------------------THEAFHIFRLLRQSVMLTTRHT 124

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L+ +FK               G  +KIGL  +++VA AL+++YAK    + A  +F+ M 
Sbjct: 125 LSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP 184

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + V +  MM    +     E L +F    R  +  D VS+ ++L      G G ++  
Sbjct: 185 VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL-----MGVGKKT-- 237

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGF---EADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                  F R +  +QV     KL     ++D+ + N  L  Y + G+   A   F ++ 
Sbjct: 238 ------VFEREL--EQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMI 289

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC--GFEPDEVTS-----INMLVACVRSG 352
           +  V   ++          S   +EL +++      F  D+  S     INM    V++G
Sbjct: 290 KSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMY---VKAG 346

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            +   R MF  M    + SWN ++S  ++S   + +++LF ++   G+ PD+ T+  +L 
Sbjct: 347 SVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLR 406

Query: 413 SCAAMGILES---GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +C+++   ES   G+QVH  +LK    +D++V++ LI +YSK  + E AE +FH     D
Sbjct: 407 ACSSLE--ESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFD 464

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +  WN+M+ G +++    EA   F  M +      Q +FA    +   L    QG+Q+HA
Sbjct: 465 LASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHA 524

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            + K  +  D+FV S +++MY KCG++  AR+ F+ +   + V W  +I G  +NG  ++
Sbjct: 525 VVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQ 584

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF-NSMQLDHGVEPILDHYTCM 648
           A+  Y  M  +GV+PD+ TF  ++ ACS    ++ G +I  N M+L+   +P +   T +
Sbjct: 585 ALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSL 642

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
           +D   + G+  +A  L   M  +    +W  ++     H N   A
Sbjct: 643 VDMYAKCGNIEDAYGLFRRMNTR-SVALWNAMIVGLAQHGNAEEA 686



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/582 (28%), Positives = 284/582 (48%), Gaps = 45/582 (7%)

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE--EMS 182
           S+ + + A  D+  G+R H +++  GL+ + YV N L+++YAKCG    A  +F+    S
Sbjct: 18  SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77

Query: 183 EPNEVTFTAMMSGLAKT------DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           + + VT+ A+++  A T      ++  EA  +FRL+ +  +     +LS +  +C   G 
Sbjct: 78  DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGS 137

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
              S+                 +    +K+G + D+ ++ +L+++YAK   +  A V+F 
Sbjct: 138 PSASEA----------------LQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFD 181

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----CVRSG 352
            +P R VV WNVM+  Y +     + + L       G  PD V+   +L+      V   
Sbjct: 182 RMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFER 241

Query: 353 DIKTGR----EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
           +++  R    ++F       V+ WN  LSSY Q+    EA+  FR+M    V  D  T  
Sbjct: 242 ELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYI 301

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
           +ILS  A++  LE GKQ+H A ++        VA+  I +Y K      A R+F ++ E+
Sbjct: 302 VILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF-QGRQV 527
           D++ WN++I+G + + L+  +   F  + ++ + P QF+  +VL +C+ L  S+  GRQV
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQV 421

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H    K G V D FV +ALI++Y K G +  A   F    G +  +WN M+HG+  +   
Sbjct: 422 HTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNY 481

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY-- 645
            EA+RL+  M   G K D ITF     A   +G +   V +    Q+   V  +  HY  
Sbjct: 482 REALRLFSLMHERGEKADQITFA---NAAKAAGCL---VRLQQGKQIHAVVIKMRFHYDL 535

Query: 646 ---TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
              + ++D   + G    A  + +++P  DD V W  ++S C
Sbjct: 536 FVISGILDMYLKCGEMKSARKVFNQIPSPDD-VAWTTVISGC 576



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 215/463 (46%), Gaps = 56/463 (12%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++++  G+ +H   L+ G+  D+F+   LI++YSK      A+ LF      D+ SWNA+
Sbjct: 412 EESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAM 471

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +     SD+   A +LF  M ER                  EKA                
Sbjct: 472 MHGFTVSDNYREALRLFSLMHERG-----------------EKA--------------DQ 500

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           IT A+  KA+  L+ ++ G++ H +VIK+    +++V + +L +Y KCG  K A  VF +
Sbjct: 501 ITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQ 560

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           +  P++V +T ++SG  +     +AL  +  M    V  D  + ++++  C+        
Sbjct: 561 IPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSL------- 613

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                     +    G+Q+H   +KL    D  +  SL+DMYAK G+++ A  +F  +  
Sbjct: 614 ---------LTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNT 664

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           RSV  WN MI G  Q   + +A+     MKS G  PD VT I +L AC  SG      + 
Sbjct: 665 RSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKN 724

Query: 361 FDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
           FDSM       P +  ++ ++ + S++ + +EA K+   M F   +   T    +L++C 
Sbjct: 725 FDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPF---EASATMYRTLLNACR 781

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
             G  E+G++V A  L T    D+     L  IY+   + E A
Sbjct: 782 VQGDKETGERV-AEKLFTMDPSDSAAYVLLSNIYAAANQWENA 823



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 156/350 (44%), Gaps = 51/350 (14%)

Query: 51  HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
           H D++  + IL    K  +++ A K+F+++P  + V+W  +IS  V NG EE+AL  Y++
Sbjct: 532 HYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQ 591

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M   G  P   T A++ KA + L  +E G++ H  ++K+    + +V  +L+ +YAKCG 
Sbjct: 592 MRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGN 651

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            + A  +F  M+  +   + AM+ GLA+     EAL  F  M  + V+ D V+   VL  
Sbjct: 652 IEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSA 711

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           C+    G+ SD +   D+             +    G E ++   + L+D  ++ G +  
Sbjct: 712 CSHS--GLTSDAYKNFDS-------------MQKTYGVEPEIEHYSCLVDALSRAGHIQE 756

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           AE + S++P                                  FE        +L AC  
Sbjct: 757 AEKVVSSMP----------------------------------FEASATMYRTLLNACRV 782

Query: 351 SGDIKTGREMFDSMPS--PSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
            GD +TG  + + + +  PS S+   +LS+   + N  E     R M  R
Sbjct: 783 QGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKR 832


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/660 (32%), Positives = 352/660 (53%), Gaps = 52/660 (7%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  SV +    L  +E G+R H ++   G+  +  +   L+ +Y  CG       +F+ +
Sbjct: 59  TYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGI 118

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
                  +  +MS  AK     E++ +F  M    +  DS + + VL             
Sbjct: 119 LNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVL------------K 166

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
            FA S    ++    ++VH   +KLGF +   + NSL+  Y K G+++SA ++F  L +R
Sbjct: 167 GFAAS----AKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDR 222

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--- 358
            VVSWN MI+G      S   +E   +M + G + D  T +N+LVAC   G++  GR   
Sbjct: 223 DVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALH 282

Query: 359 --------------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                           E+F  M   ++ SW ++++++ +   H 
Sbjct: 283 AYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHY 342

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EAI LF EMQ +G++PD   +  ++ +CA    L+ G++VH    K     +  V++ L+
Sbjct: 343 EAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALM 402

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y+KC   E A  +F ++P  +IV WN+MI G S NSL  EA   F  M Q ++ P   
Sbjct: 403 NMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDV 461

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           + A VL +CA L++  +GR++H  I + GY +D+ V  AL++MY KCG +  A+Q FDM+
Sbjct: 462 TMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMI 521

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             K+ + W  MI GY  +G+G EA+  ++ M  +G++P++ +F +IL AC+HSGL+  G 
Sbjct: 522 PKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGW 581

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           ++F+SM+ +  +EP L+HY CM+D L R+G+   A   I+ MP K D  IW  LLS CR+
Sbjct: 582 KLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRI 641

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           H +V LA++ AE +F L+P+N+  Y LLAN+Y+   +W++++ ++  +S+  +  D   S
Sbjct: 642 HHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCS 701



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 162/611 (26%), Positives = 280/611 (45%), Gaps = 85/611 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H+ I  NG+  D  L  +L+ +Y  C +    + +FD + +  I+ WN ++S   K
Sbjct: 76  GKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAK 135

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             +   +  LF++M E                                G      T   V
Sbjct: 136 IGNYRESVGLFEKMQEL-------------------------------GIRGDSYTFTCV 164

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K   A   V   +R HG V+K+G      V N+L++ Y KCG  + A  +F+E+S+ + 
Sbjct: 165 LKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDV 224

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +M+SG          LE F  M+   V +DS +L +VL  CA  G           
Sbjct: 225 VSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVG----------- 273

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ +H   +K GF   +  +N+LLDMY+K G+++ A  +F  + E ++VSW
Sbjct: 274 -----NLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSW 328

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------- 359
             +IA + ++    +AI L   M+S G  PD     +++ AC  S  +  GRE       
Sbjct: 329 TSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKK 388

Query: 360 ----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +F  +P  ++ SWN M+  YSQ+    EA++L
Sbjct: 389 NNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQL 448

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +MQ + +KPD  T+A +L +CA +  LE G+++H   L+     D +VA  L+ +Y K
Sbjct: 449 FLDMQ-KQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVK 507

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C    LA+++F  IP+ D++ W  MIAG  ++    EA   F++MR   + P + SF ++
Sbjct: 508 CGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSI 567

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMMHGK- 569
           L +C       +G ++   ++ +  +       A ++++  + G++  A +F + M  K 
Sbjct: 568 LYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKP 627

Query: 570 NTVTWNEMIHG 580
           +   W  ++ G
Sbjct: 628 DAAIWGALLSG 638



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 224/466 (48%), Gaps = 57/466 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA+ ++ G        N L+++YSKC N + A  +F KM    I SW +I++A   
Sbjct: 278 GRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAH-- 335

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                        VR GL  +A+ ++++M ++G  P    + SV
Sbjct: 336 -----------------------------VREGLHYEAIGLFDEMQSKGLRPDIYAVTSV 366

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      ++ GR  H  + K  +  N+ V+NAL+++YAKCG  + A  +F ++   N 
Sbjct: 367 VHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNI 426

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M+ G ++     EAL++F L ++K +  D V+++ VL  CA              
Sbjct: 427 VSWNTMIGGYSQNSLPNEALQLF-LDMQKQLKPDDVTMACVLPACA-------------- 471

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+++H   ++ G+ +DLH++ +L+DMY K G +  A+ +F  +P++ ++ W
Sbjct: 472 --GLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILW 529

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
            VMIAGYG      +AI   ++M+  G EP+E +  ++L AC  SG +K G ++FDSM S
Sbjct: 530 TVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKS 589

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +  M+    +S N   A K    M    +KPD      +LS C     +E
Sbjct: 590 ECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMP---IKPDAAIWGALLSGCRIHHDVE 646

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
             ++V     +       Y    L  +Y++ ++ E  +++  RI +
Sbjct: 647 LAEKVAEHIFELEPENTRYYVL-LANVYAEAEKWEEVKKIQRRISK 691



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 142/573 (24%), Positives = 255/573 (44%), Gaps = 94/573 (16%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H ++L+ G      + N LI  Y KC    SA+ LFD++  +D+ SWN+        
Sbjct: 178 KRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNS-------- 229

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                                  +IS    NG     L  + +M N G      TL +V 
Sbjct: 230 -----------------------MISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVL 266

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A   + ++  GR  H   +K G    +   N LL +Y+KCG    A  VF +M E   V
Sbjct: 267 VACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIV 326

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++T++++   +     EA+ +F  M  K +  D  +++SV+  CA   C    D      
Sbjct: 327 SWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACA---CSNSLD------ 377

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G++VH    K    ++L +SN+L++MYAK G M+ A +IFS LP +++VSWN
Sbjct: 378 -------KGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWN 430

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-------- 359
            MI GY Q     +A++L   M+    +PD+VT   +L AC     ++ GRE        
Sbjct: 431 TMIGGYSQNSLPNEALQLFLDMQK-QLKPDDVTMACVLPACAGLAALEKGREIHGHILRK 489

Query: 360 ---------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                      +FD +P   +  W  M++ Y      KEAI  F
Sbjct: 490 GYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTF 549

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYS 450
            +M+  G++P+ ++   IL +C   G+L+ G ++   S+K+  +I+  +   + ++ +  
Sbjct: 550 EKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLF-DSMKSECNIEPKLEHYACMVDLLI 608

Query: 451 KCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN--EMYPTQFS 507
           +      A +    +P + D   W ++++G  ++  D+E     +++ ++  E+ P    
Sbjct: 609 RSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHH-DVE---LAEKVAEHIFELEPENTR 664

Query: 508 FATVLSSCAKLSSSFQG-RQVHAQIEKDGYVND 539
           +  +L++    +  ++  +++  +I K G  ND
Sbjct: 665 YYVLLANVYAEAEKWEEVKKIQRRISKGGLKND 697


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 215/634 (33%), Positives = 339/634 (53%), Gaps = 56/634 (8%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KN    N ++S + K G    A  +F+ M +   VT+T +M   A+     EA ++FR M
Sbjct: 77  KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136

Query: 213 IRKAVSI--DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            R +     D V+ +++L  C               ++   +N  GQ VH   +KLGF+ 
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGC---------------NDAVPQNAVGQ-VHAFAVKLGFDT 180

Query: 271 D--LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           +  L +SN LL  Y +   +D A V+F  +PE+  V++N +I GY +    T++I L  +
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLK 240

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTG------------------------------- 357
           M+  G +P + T   +L A V   D   G                               
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR 300

Query: 358 ----REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
               R +FD MP     S+N ++SSYSQ++ ++ ++  FREMQ  G        A +LS 
Sbjct: 301 VLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
            A +  L+ G+Q+H  +L   +    +V + L+ +Y+KC+  E AE +F  +P+   V W
Sbjct: 361 AANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSW 420

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
            ++I+G     L       F +MR + +   Q +FATVL + A  +S   G+Q+HA I +
Sbjct: 421 TALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIR 480

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G + ++F GS L++MY KCG I  A Q F+ M  +N V+WN +I  +A NG G+ A+  
Sbjct: 481 SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGA 540

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +  MI SG++PD ++ + +LTACSH G V+ G E F +M   +G+ P   HY CM+D LG
Sbjct: 541 FAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLG 600

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYS 712
           R G F EAE L+DEMP + D ++W  +L++CR+H N  LA+RAAE+LF ++  +++A Y 
Sbjct: 601 RNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYV 660

Query: 713 LLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            ++NIY++ G W+ +R V++ M E  I K PAYS
Sbjct: 661 SMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYS 694



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 163/653 (24%), Positives = 289/653 (44%), Gaps = 98/653 (15%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + + A I++ G   DT   N ++E   +     +A+ ++D+MPHK+  S N ++S   K+
Sbjct: 33  RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITLAS 125
            D+  A  LFD MP+R VV+W  L+    RN   ++A  ++ +M  S+   +P H+T  +
Sbjct: 93  GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIY--VANALLSLYAKCGWTKHAVPVFEEMSE 183
           +       +      + H   +K+G D N +  V+N LL  Y +      A  +FEE+ E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + VTF  +++G  K     E++ +F  M +        + S VL        G+    F
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV----GLHD--F 266

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
           A           GQQ+H L++  GF  D  + N +LD Y+K+  +    ++F  +PE   
Sbjct: 267 AL----------GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDF 316

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           VS+NV+I+ Y Q  Q   ++   + M+  GF+        ML        ++ GR++   
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           F S+P  +  SW A++S Y Q   H   
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           +KLF +M+   ++ D++T A +L + A+   L  GKQ+HA  +++ +  + +  SGL+ +
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+KC   + A +VF  +P+ + V WN++I+  + N     A   F +M ++ + P   S 
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
             VL++C+                                    CG +    ++F  M  
Sbjct: 557 LGVLTACS-----------------------------------HCGFVEQGTEYFQAMSP 581

Query: 569 KNTVTWNE-----MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
              +T  +     M+    +NG   EA +L  +M     +PD+I + ++L AC
Sbjct: 582 IYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNAC 631



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 149/616 (24%), Positives = 265/616 (43%), Gaps = 102/616 (16%)

Query: 46  FDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKAL 105
           FD  P   +   N +L + C+   L+ A  LF+E+PE++ V++N LI+   ++GL  +++
Sbjct: 178 FDTNPFLTVS--NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235

Query: 106 SVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
            ++ KM   G  P+  T + V KA   L D   G++ H L +  G  ++  V N +L  Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295

Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
           +K         +F+EM E + V++  ++S  ++ D+   +L  FR M        +   +
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA 355

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
           ++L + A                  S    G+Q+HC  +    ++ LH+ NSL+DMYAK 
Sbjct: 356 TMLSIAA----------------NLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC 399

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
              + AE+IF +LP+R+ VSW  +I+GY QK      ++L  +M+      D+ T   +L
Sbjct: 400 EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVL 459

Query: 346 VAC----------------VRSGD-------------------IKTGREMFDSMPSPSVS 370
            A                 +RSG+                   IK   ++F+ MP  +  
Sbjct: 460 KASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 519

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           SWNA++S+++ + + + AI  F +M   G++PD  ++  +L++C+  G +E G +   A 
Sbjct: 520 SWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQA- 578

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
                       S + GI  K +         H    LD++  N   A            
Sbjct: 579 -----------MSPIYGITPKKK---------HYACMLDLLGRNGRFAEAE--------- 609

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
              K M +    P +  +++VL++C    +     +   ++     + D     ++  +Y
Sbjct: 610 ---KLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIY 666

Query: 551 CKCGDIYGARQFFDMMHGKN-----TVTW---NEMIHGYAQNGY----GDEAVRLYKDMI 598
              G+    R     M  +        +W   N  IH ++ N      GDE VR   ++ 
Sbjct: 667 AAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELT 726

Query: 599 A----SGVKPDDITFV 610
           A     G KPD  + V
Sbjct: 727 AEIEREGYKPDTSSVV 742



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA I+R+G  ++ F  + L+++Y+KC +   A  +F++MP ++  SWNA++SA   
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHAD 530

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMS 112
           + D E A   F +M E  +    VS   +++A    G  E+    +  MS
Sbjct: 531 NGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS 580


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1038

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/730 (30%), Positives = 388/730 (53%), Gaps = 52/730 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y   AIL        +  + K+F+EMP+RNVVSW +L+      G  E+ + +Y  M 
Sbjct: 194 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMR 253

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            EG      +++ V  +   L D   GR+  G VIK GL+  + V N+L+S++   G   
Sbjct: 254 GEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVD 313

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +A  +F ++SE + +++ ++++  A+   + E+  +F LM R    ++S ++S++L V  
Sbjct: 314 YANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLG 373

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                   DV  Q   K+ R +HG     L +K+GF++ + + N+LL MYA  G  + A+
Sbjct: 374 --------DVDHQ---KWGRGIHG-----LVVKMGFDSVVCVCNTLLRMYAGAGRSEEAD 417

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--- 349
           ++F  +P + ++SWN ++A +    +S  A+ +L  M   G   + VT  + L AC    
Sbjct: 418 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPE 477

Query: 350 --------------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                                           + G + T R +   MP   V +WNA++ 
Sbjct: 478 FFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIG 537

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG-ILESGKQVHAASLKTASH 436
            Y+++E+  +A+  F+ ++  GV  +  T+  +LS+C   G +LE GK +HA  +     
Sbjct: 538 GYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFE 597

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D +V + LI +Y+KC     ++ +F+ +    I+ WN+++A  + +    E      +M
Sbjct: 598 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKM 657

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R   +   QFSF+  LS+ AKL+   +G+Q+H    K G+  D F+ +A  +MY KCG+I
Sbjct: 658 RSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEI 717

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
               +       ++  +WN +I    ++GY +E    + +M+  G+KP  +TFV++LTAC
Sbjct: 718 GEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTAC 777

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH GLVD G+  ++ +  D G+EP ++H  C+ID LGR+G   EAE  I +MP K + ++
Sbjct: 778 SHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 837

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W  LL+SC++H ++   ++AAE L +L+P++ + + L +N++++ GRW+D+  VR+ M  
Sbjct: 838 WRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGF 897

Query: 737 NCIVKDPAYS 746
             I K  A S
Sbjct: 898 KNIKKKQACS 907



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 188/707 (26%), Positives = 320/707 (45%), Gaps = 106/707 (14%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +++   K   ++ A  LFD+MP RN VSWN ++S +VR GL  + +  + KM + G  
Sbjct: 97  NTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIK 156

Query: 118 PTHITLASVFKA---STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           P+   +AS+  A   S ++     G + HG V K GL  ++YV+ A+L LY   G    +
Sbjct: 157 PSSFVIASLVTACGRSGSMF--REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCS 214

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             VFEEM + N V++T++M G +      E +++++ M  + V  +  S+S V+  C   
Sbjct: 215 RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCG-- 272

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
                       D    R + GQ      IK G E+ L + NSL+ M+   G++D A  I
Sbjct: 273 ---------LLKDESLGRQIIGQ-----VIKSGLESKLAVENSLISMFGNMGNVDYANYI 318

Query: 295 FSNLPERSVVSWNVMIAGYGQK---YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
           F+ + ER  +SWN ++A Y Q     +S++   L++R        DEV S  +       
Sbjct: 319 FNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFH------DEVNSTTVSTLLSVL 372

Query: 352 GDI---KTGREM-----------------------------------FDSMPSPSVSSWN 373
           GD+   K GR +                                   F  MP+  + SWN
Sbjct: 373 GDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWN 432

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           ++++S+       +A+ +   M   G   +  T    L++C +    + G+ +H   + +
Sbjct: 433 SLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVS 492

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               +  + + L+ +Y K      + RV  ++P  D+V WN++I G + N    +A   F
Sbjct: 493 GLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAF 552

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           + +R   +     +  +VLS+C       + G+ +HA I   G+ +D  V ++LI MY K
Sbjct: 553 QTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 612

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           CGD+  ++  F+ +  ++ +TWN ++   A +G+G+E ++L   M + G+  D  +F   
Sbjct: 613 CGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEG 672

Query: 613 LTACS-----------HSGLVDVGVE----IFNSM---------------QLDHGVEPIL 642
           L+A +           H   V +G E    IFN+                 L   V   L
Sbjct: 673 LSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 732

Query: 643 DHYTCMIDCLGRAGHFHEA-----EMLIDEMPCKDDPVIWEVLLSSC 684
             +  +I  LGR G+F E      EML  EM  K   V +  LL++C
Sbjct: 733 PSWNILISALGRHGYFEEVCETFHEML--EMGIKPGHVTFVSLLTAC 777



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 248/513 (48%), Gaps = 50/513 (9%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           GR  H L +K  +  ++   N L+++Y K G  K A  +F++M   NEV++  MMSG+ +
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
               +E +E F+ M    +   S  ++S++  C R G      +F +          G Q
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSG-----SMFRE----------GVQ 181

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           VH    K G  +D+++S ++L +Y   G +  +  +F  +P+R+VVSW  ++ GY  K +
Sbjct: 182 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 241

Query: 319 STKAIELLQRMK----------------SCGFEPDEVTSINMLVACVRS----------- 351
             + I++ + M+                SCG   DE     ++   ++S           
Sbjct: 242 PEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENS 301

Query: 352 --------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                   G++     +F+ +      SWN+++++Y+Q+ + +E+ ++F  M+    + +
Sbjct: 302 LISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVN 361

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
            TT++ +LS    +   + G+ +H   +K        V + L+ +Y+   R+E A+ VF 
Sbjct: 362 STTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFK 421

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
           ++P  D++ WNS++A    +   ++A      M +        +F + L++C       +
Sbjct: 422 QMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDK 481

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           GR +H  +   G  ++  +G+AL+ MY K G +  +R+    M  ++ V WN +I GYA+
Sbjct: 482 GRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAE 541

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
           N   D+A+  ++ +   GV  + IT V++L+AC
Sbjct: 542 NEDPDKALAAFQTLRVEGVSANYITVVSVLSAC 574



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/476 (23%), Positives = 217/476 (45%), Gaps = 50/476 (10%)

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
           ++ +R   G+ +H L +K      +  +N+L++MY K G +  A  +F  +P R+ VSWN
Sbjct: 69  SQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWN 128

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI------------K 355
            M++G  +     + +E  Q+M   G +P      +++ AC RSG +            K
Sbjct: 129 TMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 188

Query: 356 TG------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
           +G                        R++F+ MP  +V SW +++  YS     +E I +
Sbjct: 189 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 248

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           ++ M+  GV+ +  ++++++SSC  +     G+Q+    +K+       V + LI ++  
Sbjct: 249 YKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGN 308

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
               + A  +F++I E D + WNS++A  + N    E+   F  MR+        + +T+
Sbjct: 309 MGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTL 368

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS    +     GR +H  + K G+ + + V + L+ MY   G    A   F  M  K+ 
Sbjct: 369 LSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDL 428

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           ++WN ++  +  +G   +A+ +   MI +G   + +TF + L AC          E F+ 
Sbjct: 429 ISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAAC-------FSPEFFDK 481

Query: 632 MQLDHG---VEPILDHY---TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            ++ HG   V  + D+      ++   G+ G    +  ++ +MP + D V W  L+
Sbjct: 482 GRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMP-RRDVVAWNALI 536



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 155/298 (52%), Gaps = 4/298 (1%)

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           +G+ +HA  +K    +     + LI +Y+K  R + A  +F ++P  + V WN+M++G+ 
Sbjct: 76  TGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIV 135

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDI 540
              L +E   FF++M    + P+ F  A+++++C +  S F +G QVH  + K G ++D+
Sbjct: 136 RVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 195

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           +V +A++ +Y   G +  +R+ F+ M  +N V+W  ++ GY+  G  +E + +YK M   
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGE 255

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           GV+ ++ +   ++++C       +G +I   + +  G+E  L     +I   G  G+   
Sbjct: 256 GVECNENSMSLVISSCGLLKDESLGRQIIGQV-IKSGLESKLAVENSLISMFGNMGNVDY 314

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL-DPKNSAPYSLLANI 717
           A  + +++  + D + W  ++++   + ++  + R    + R  D  NS   S L ++
Sbjct: 315 ANYIFNQIS-ERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSV 371


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 227/717 (31%), Positives = 361/717 (50%), Gaps = 53/717 (7%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++  L+ A  LF  +      +WN +I      G    AL  Y KM   G  P   T   
Sbjct: 4   RTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPY 63

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA   L  V+ G+  H  V  +GL ++++V ++L+ LYA+ G    A  +F+ + + +
Sbjct: 64  VVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKD 123

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +  M++G  K      A+++F  M    +  +SV+ + VL VCA E         A 
Sbjct: 124 SVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASE---------AM 174

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D        G Q+H + +  G E D  ++N+LL MY+K   + +A  +F   P+  +VS
Sbjct: 175 LD-------LGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVS 227

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           WN +I+GY Q     +A  L + M S G +PD +T  + L  CV                
Sbjct: 228 WNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFL-PCVNELLSLKHCKEIHGYI 286

Query: 350 --------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               +  D++  +++     S        M+S Y  +  +KEA+
Sbjct: 287 IRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEAL 346

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           + FR +    +KP   T + I  + A +  L  GK++H + +KT      +V S ++ +Y
Sbjct: 347 EAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMY 406

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC R +LA RVF+RI E D +CWNSMI   S N    EA   F+QM          S +
Sbjct: 407 AKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSIS 466

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
             LS+CA L +   G+++H  + K    +D++  S+LI+MY KCG++  +R+ FD M  +
Sbjct: 467 GALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQER 526

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           N V+WN +I  Y  +G   E + L+ +M+ +G++PD +TF+ I++AC H+G VD G+  +
Sbjct: 527 NEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYY 586

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           + M  ++G+   ++HY C+ D  GRAG   EA   I+ MP   D  +W  LL +C +H N
Sbjct: 587 HLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGN 646

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           V LA+ A++ LF LDP NS  Y LLAN+ +  G+W  +  VR +M E  + K P YS
Sbjct: 647 VELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYS 703



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 261/590 (44%), Gaps = 94/590 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H  +   GL +D F+ + LI+LY++  +   AQ+LFD +P KD   WN +L+   K
Sbjct: 77  GKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVK 136

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           + D   A K+F EM    +                                P  +T A V
Sbjct: 137 NGDSGNAIKIFLEMRHSEI-------------------------------KPNSVTFACV 165

Query: 127 FK--ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
               AS A+LD+  G + HG+ +  GL+ +  VAN LL++Y+KC   + A  +F+   + 
Sbjct: 166 LSVCASEAMLDL--GTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQS 223

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++  ++SG  +   + EA  +FR MI   +  DS++ +S L  C  E   ++     
Sbjct: 224 DLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFL-PCVNELLSLK----- 277

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                     H +++H   I+     D+ L ++L+D+Y K  D++ A+ I         V
Sbjct: 278 ----------HCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTV 327

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
               MI+GY    ++ +A+E  + +     +P  VT  ++  A      +  G+E+    
Sbjct: 328 VCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSI 387

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          F+ +       WN+M++S SQ+    EAI
Sbjct: 388 IKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAI 447

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LFR+M   G + D  +++  LS+CA +  L  GK++H   +K     D Y  S LI +Y
Sbjct: 448 NLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMY 507

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC     + RVF R+ E + V WNS+I+    +    E    F +M +N + P   +F 
Sbjct: 508 AKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFL 567

Query: 510 TVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
            ++S+C       +G R  H   E+ G         A +E Y    D++G
Sbjct: 568 GIISACGHAGQVDEGIRYYHLMTEEYGI-------PARMEHYACVADMFG 610



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 208/445 (46%), Gaps = 49/445 (11%)

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MY + G +  A+ +F  L      +WN MI G+    Q   A+    +M   G  PD+ T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 341 SINMLVACVRSGDIKTGR-----------------------------------EMFDSMP 365
              ++ AC     +K G+                                    +FD++P
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
                 WN ML+ Y ++ +   AIK+F EM+   +KP+  T A +LS CA+  +L+ G Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +H  ++     +D+ VA+ L+ +YSKCQ  + A ++F   P+ D+V WN +I+G   N L
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             EA   F+ M    + P   +FA+ L    +L S    +++H  I +   V D+F+ SA
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           LI++Y KC D+  A++        +TV    MI GY  NG   EA+  ++ ++   +KP 
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSM---QLD---HGVEPILDHYTCMIDCLGRAGHFH 659
            +TF +I  A +    +++G E+  S+   +LD   H    ILD Y        + G   
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYA-------KCGRLD 413

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSC 684
            A  + + +  K D + W  +++SC
Sbjct: 414 LACRVFNRITEK-DAICWNSMITSC 437



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 192/419 (45%), Gaps = 55/419 (13%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H +I+R+ +  D FL + LI++Y KC                               
Sbjct: 280 KEIHGYIIRHAVVLDVFLKSALIDIYFKCR------------------------------ 309

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            D+E A K+  +    + V    +IS  V NG  ++AL  +  +  E   PT +T +S+F
Sbjct: 310 -DVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIF 368

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A   L  +  G+  HG +IK  LD+  +V +A+L +YAKCG    A  VF  ++E + +
Sbjct: 369 PAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAI 428

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            + +M++  ++  R  EA+ +FR M  +    D VS+S  L  CA               
Sbjct: 429 CWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACA--------------- 473

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                  +G+++H L IK    +DL+  +SL+DMYAK G+++ +  +F  + ER+ VSWN
Sbjct: 474 -NLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWN 532

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS- 366
            +I+ YG      + + L   M   G +PD VT + ++ AC  +G +  G   +  M   
Sbjct: 533 SIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEE 592

Query: 367 ---PS-VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
              P+ +  +  +   + ++    EA +    M F    PD      +L +C   G +E
Sbjct: 593 YGIPARMEHYACVADMFGRAGRLDEAFETINSMPF---PPDAGVWGTLLGACHIHGNVE 648


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 229/734 (31%), Positives = 377/734 (51%), Gaps = 83/734 (11%)

Query: 53   DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
            D++   A+++  CK   +  A  LFD+MPER+ V WN ++ A V N  +++AL  ++   
Sbjct: 751  DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFH 810

Query: 113  NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
              GF P    L  V     +  DV + R+ H   +K                        
Sbjct: 811  RSGFFPDFSNLHCVIGGVNS--DVSNNRKRHAEQVK-----------------------A 845

Query: 173  HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            +A+ +F      N   +   ++      ++V A++ F+ ++R  +  DSV+L  +L    
Sbjct: 846  YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAA- 904

Query: 233  REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                 V +D              G+Q+H L IK  F   + +SNSL++MY+K G + +AE
Sbjct: 905  -----VGADDLDL----------GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 293  VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
              F N PE  ++SWN MI+ Y Q     +AI   + +   G +PD+ T  ++L AC  +G
Sbjct: 950  KTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC-STG 1008

Query: 353  D---------------IKTGREMFDSMPSPSV-------------------------SSW 372
            D               IK G  + DS  S ++                         +SW
Sbjct: 1009 DEGEYFTLGSQVHVYAIKCGI-INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASW 1067

Query: 373  NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
            NA++  Y +S   ++A++ F  M   G+  D  TLA  + +   +  L+ GKQ+ A ++K
Sbjct: 1068 NAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIK 1127

Query: 433  TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
               + D +V+SG++ +Y KC     A  +F  I   D V W +MI+G   N  +  A   
Sbjct: 1128 LGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSV 1187

Query: 493  FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
            +  MR + + P +++FAT++ + + L++  QG+Q+HA + K  Y  D FVG++L++MYCK
Sbjct: 1188 YHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCK 1247

Query: 553  CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
            CG +  A + F  M  +  V WN M+ G AQ+G+ DEA+ L++ M ++G++PD +TF+ +
Sbjct: 1248 CGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGV 1307

Query: 613  LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
            L+ACSHSGL     + F++M   +G+ P ++HY+C++D LGRAG   EAE +I  MP K 
Sbjct: 1308 LSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKA 1367

Query: 673  DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
               ++  LL +CR   +   AKR A++L  LDP +S+ Y LL+NIY++  +WDD+   R 
Sbjct: 1368 SASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARN 1427

Query: 733  LMSENCIVKDPAYS 746
            +M    + KDP +S
Sbjct: 1428 MMKLKNVKKDPGFS 1441



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 196/697 (28%), Positives = 335/697 (48%), Gaps = 57/697 (8%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            GK  HA I+ +G   D +L N LI +YSKC +  SA+ +FDK   +D+ +WN+IL+    
Sbjct: 630  GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA---- 685

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  AY  F +    NV+                +   ++  +   GF  T +TLA +
Sbjct: 686  ------AYAQFADSSYENVL----------------EGFRLFGLLREFGFSITRLTLAPL 723

Query: 127  FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             K       V+     HG  +KIG + +++V+ AL+++Y K G    A  +F++M E + 
Sbjct: 724  LKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDA 783

Query: 187  VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            V +  M+    +     EAL  F    R     D  +L  V+G       GV SDV   S
Sbjct: 784  VLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIG-------GVNSDV---S 833

Query: 247  DNKFSRNVHGQQVHCLTIKL-GFE--ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
            +N   R  H +QV    +K+  F+  +++   N  L  +   G + +A   F  L   ++
Sbjct: 834  NN---RKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTI 890

Query: 304  VSWNVMIAGYGQKYQSTKAIELLQRMKS----CGFEPDEVTSINMLVACVRSGDIKTGRE 359
               +V +            ++L +++ +      F P    S +++    ++G +    +
Sbjct: 891  GHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEK 950

Query: 360  MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
             F + P   + SWN M+SSY+Q+    EAI  FR++   G+KPD+ TLA +L +C+    
Sbjct: 951  TFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDE 1010

Query: 420  LES---GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
             E    G QVH  ++K     D++V++ LI +YSK  + + AE + H   + D+  WN++
Sbjct: 1011 GEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAI 1070

Query: 477  IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
            + G   ++   +A   F  M +  +   + + AT + +   L +  QG+Q+ A   K G+
Sbjct: 1071 MFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGF 1130

Query: 537  VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
             ND++V S +++MY KCGD+  A + F  +   + V W  MI GY +NG  D A+ +Y  
Sbjct: 1131 NNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHL 1190

Query: 597  MIASGVKPDDITFVAILTACSHSGLVDVGVEIF-NSMQLDHGVEPILDHY--TCMIDCLG 653
            M  SGV+PD+ TF  ++ A S    ++ G +I  N ++LD+     LDH+  T ++D   
Sbjct: 1191 MRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYS----LDHFVGTSLVDMYC 1246

Query: 654  RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
            + G   +A  +  +M  +   V W  +L     H +V
Sbjct: 1247 KCGSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHV 1282



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 161/578 (27%), Positives = 288/578 (49%), Gaps = 46/578 (7%)

Query: 128  KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            +++ A+ D++ G+R H  ++  G   + Y+ N L+++Y+KCG    A  VF++ S+ + V
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 188  TFTAMMSGLAK-----TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
            T+ ++++  A+      + V+E   +F L+     SI  ++L+ +L +C   G       
Sbjct: 679  TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSG------- 731

Query: 243  FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
            F Q     S  VHG       +K+GFE DL +S +L+++Y K G +  A ++F  +PER 
Sbjct: 732  FVQ----VSETVHG-----YAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERD 782

Query: 303  VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---- 358
             V WNVM+  Y +     +A+         GF PD  ++++ ++  V S D+   R    
Sbjct: 783  AVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPD-FSNLHCVIGGVNS-DVSNNRKRHA 840

Query: 359  --------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
                    +MF      ++ +WN  L+ +  +     AI  F+ +    +  D  TL II
Sbjct: 841  EQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVII 900

Query: 411  LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
            LS+      L+ G+Q+HA  +K++      V++ L+ +YSK      AE+ F   PELD+
Sbjct: 901  LSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDL 960

Query: 471  VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS---FQGRQV 527
            + WN+MI+  + N+L++EA   F+ + ++ + P QF+ A+VL +C+          G QV
Sbjct: 961  ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQV 1020

Query: 528  HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK---NTVTWNEMIHGYAQN 584
            H    K G +ND FV +ALI++Y K G +  A +F  ++HGK   +  +WN ++ GY ++
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EF--LLHGKYDFDLASWNAIMFGYIKS 1077

Query: 585  GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
                +A+  +  M   G+  D+IT    + A      +  G +I  +  +  G    L  
Sbjct: 1078 NKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQI-QAYAIKLGFNNDLWV 1136

Query: 645  YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
             + ++D   + G    A  L  E+  + D V W  ++S
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEI-SRPDEVAWTTMIS 1173



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 159/356 (44%), Gaps = 52/356 (14%)

Query: 51   HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
            + D++  + +L    K  D+  A +LF E+   + V+W  +IS  + NG E+ ALSVY+ 
Sbjct: 1131 NNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHL 1190

Query: 111  MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
            M   G  P   T A++ KAS+ L  +E G++ H  V+K+    + +V  +L+ +Y KCG 
Sbjct: 1191 MRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGS 1250

Query: 171  TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
             + A  VF +M     V + AM+ GLA+   V EAL +FR M    +  D V+   VL  
Sbjct: 1251 VQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSA 1310

Query: 231  CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
            C+    G+ S+ +   D  F                G   ++   + L+D   + G +  
Sbjct: 1311 CSH--SGLFSEAYKYFDAMFK-------------TYGITPEIEHYSCLVDALGRAGRIQE 1355

Query: 291  AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
            AE + +++P ++  S           Y++                        +L AC  
Sbjct: 1356 AENVIASMPFKASASM----------YRA------------------------LLGACRT 1381

Query: 351  SGDIKTGREMFDSMPS--PSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGVKPD 403
             GD +T + + D + +  PS SS   +LS+ Y+ S    +       M+ + VK D
Sbjct: 1382 KGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKD 1437



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            GK +HA++++     D F+   L+++Y KC +   A  +F KM  + +  WNA+L    +
Sbjct: 1219 GKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQ 1278

Query: 67   SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM-SNEGFVP 118
               ++ A  LF  M    +    V++  ++SA   +GL  +A   ++ M    G  P
Sbjct: 1279 HGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITP 1335


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 229/734 (31%), Positives = 377/734 (51%), Gaps = 83/734 (11%)

Query: 53   DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
            D++   A+++  CK   +  A  LFD+MPER+ V WN ++ A V N  +++AL  ++   
Sbjct: 751  DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFH 810

Query: 113  NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
              GF P    L  V     +  DV + R+ H   +K                        
Sbjct: 811  RSGFXPDFSNLHCVIGGVNS--DVSNNRKRHAEQVK-----------------------A 845

Query: 173  HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            +A+ +F      N   +   ++      ++V A++ F+ ++R  +  DSV+L  +L    
Sbjct: 846  YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAA- 904

Query: 233  REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                 V +D              G+Q+H L IK  F   + +SNSL++MY+K G + +AE
Sbjct: 905  -----VGADDLDL----------GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 293  VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
              F N PE  ++SWN MI+ Y Q     +AI   + +   G +PD+ T  ++L AC  +G
Sbjct: 950  KTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC-STG 1008

Query: 353  D---------------IKTGREMFDSMPSPSV-------------------------SSW 372
            D               IK G  + DS  S ++                         +SW
Sbjct: 1009 DEGEYFTLGSQVHVYAIKCGI-INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASW 1067

Query: 373  NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
            NA++  Y +S   ++A++ F  M   G+  D  TLA  + +   +  L+ GKQ+ A ++K
Sbjct: 1068 NAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIK 1127

Query: 433  TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
               + D +V+SG++ +Y KC     A  +F  I   D V W +MI+G   N  +  A   
Sbjct: 1128 LGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSV 1187

Query: 493  FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
            +  MR + + P +++FAT++ + + L++  QG+Q+HA + K  Y  D FVG++L++MYCK
Sbjct: 1188 YHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCK 1247

Query: 553  CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
            CG +  A + F  M  +  V WN M+ G AQ+G+ DEA+ L++ M ++G++PD +TF+ +
Sbjct: 1248 CGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGV 1307

Query: 613  LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
            L+ACSHSGL     + F++M   +G+ P ++HY+C++D LGRAG   EAE +I  MP K 
Sbjct: 1308 LSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKA 1367

Query: 673  DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
               ++  LL +CR   +   AKR A++L  LDP +S+ Y LL+NIY++  +WDD+   R 
Sbjct: 1368 SASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARN 1427

Query: 733  LMSENCIVKDPAYS 746
            +M    + KDP +S
Sbjct: 1428 MMKLKNVKKDPGFS 1441



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 196/697 (28%), Positives = 335/697 (48%), Gaps = 57/697 (8%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            GK  HA I+ +G   D +L N LI +YSKC +  SA+ +FDK   +D+ +WN+IL+    
Sbjct: 630  GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA---- 685

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  AY  F +    NV+                +   ++  +   GF  T +TLA +
Sbjct: 686  ------AYAQFADSSYENVL----------------EGFRLFGLLREFGFSITRLTLAPL 723

Query: 127  FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             K       V+     HG  +KIG + +++V+ AL+++Y K G    A  +F++M E + 
Sbjct: 724  LKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDA 783

Query: 187  VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            V +  M+    +     EAL  F    R     D  +L  V+G       GV SDV   S
Sbjct: 784  VLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIG-------GVNSDV---S 833

Query: 247  DNKFSRNVHGQQVHCLTIKL-GFE--ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
            +N   R  H +QV    +K+  F+  +++   N  L  +   G + +A   F  L   ++
Sbjct: 834  NN---RKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTI 890

Query: 304  VSWNVMIAGYGQKYQSTKAIELLQRMKS----CGFEPDEVTSINMLVACVRSGDIKTGRE 359
               +V +            ++L +++ +      F P    S +++    ++G +    +
Sbjct: 891  GHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEK 950

Query: 360  MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
             F + P   + SWN M+SSY+Q+    EAI  FR++   G+KPD+ TLA +L +C+    
Sbjct: 951  TFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDE 1010

Query: 420  LES---GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
             E    G QVH  ++K     D++V++ LI +YSK  + + AE + H   + D+  WN++
Sbjct: 1011 GEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAI 1070

Query: 477  IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
            + G   ++   +A   F  M +  +   + + AT + +   L +  QG+Q+ A   K G+
Sbjct: 1071 MFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGF 1130

Query: 537  VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
             ND++V S +++MY KCGD+  A + F  +   + V W  MI GY +NG  D A+ +Y  
Sbjct: 1131 NNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHL 1190

Query: 597  MIASGVKPDDITFVAILTACSHSGLVDVGVEIF-NSMQLDHGVEPILDHY--TCMIDCLG 653
            M  SGV+PD+ TF  ++ A S    ++ G +I  N ++LD+     LDH+  T ++D   
Sbjct: 1191 MRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYS----LDHFVGTSLVDMYC 1246

Query: 654  RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
            + G   +A  +  +M  +   V W  +L     H +V
Sbjct: 1247 KCGSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHV 1282



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 161/578 (27%), Positives = 288/578 (49%), Gaps = 46/578 (7%)

Query: 128  KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            +++ A+ D++ G+R H  ++  G   + Y+ N L+++Y+KCG    A  VF++ S+ + V
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 188  TFTAMMSGLAK-----TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
            T+ ++++  A+      + V+E   +F L+     SI  ++L+ +L +C   G       
Sbjct: 679  TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSG------- 731

Query: 243  FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
            F Q     S  VHG       +K+GFE DL +S +L+++Y K G +  A ++F  +PER 
Sbjct: 732  FVQ----VSETVHG-----YAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERD 782

Query: 303  VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---- 358
             V WNVM+  Y +     +A+         GF PD  ++++ ++  V S D+   R    
Sbjct: 783  AVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPD-FSNLHCVIGGVNS-DVSNNRKRHA 840

Query: 359  --------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
                    +MF      ++ +WN  L+ +  +     AI  F+ +    +  D  TL II
Sbjct: 841  EQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVII 900

Query: 411  LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
            LS+      L+ G+Q+HA  +K++      V++ L+ +YSK      AE+ F   PELD+
Sbjct: 901  LSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDL 960

Query: 471  VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS---FQGRQV 527
            + WN+MI+  + N+L++EA   F+ + ++ + P QF+ A+VL +C+          G QV
Sbjct: 961  ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQV 1020

Query: 528  HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK---NTVTWNEMIHGYAQN 584
            H    K G +ND FV +ALI++Y K G +  A +F  ++HGK   +  +WN ++ GY ++
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EF--LLHGKYDFDLASWNAIMFGYIKS 1077

Query: 585  GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
                +A+  +  M   G+  D+IT    + A      +  G +I  +  +  G    L  
Sbjct: 1078 NKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQI-QAYAIKLGFNNDLWV 1136

Query: 645  YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
             + ++D   + G    A  L  E+  + D V W  ++S
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEI-SRPDEVAWTTMIS 1173



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 159/356 (44%), Gaps = 52/356 (14%)

Query: 51   HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
            + D++  + +L    K  D+  A +LF E+   + V+W  +IS  + NG E+ ALSVY+ 
Sbjct: 1131 NNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHL 1190

Query: 111  MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
            M   G  P   T A++ KAS+ L  +E G++ H  V+K+    + +V  +L+ +Y KCG 
Sbjct: 1191 MRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGS 1250

Query: 171  TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
             + A  VF +M     V + AM+ GLA+   V EAL +FR M    +  D V+   VL  
Sbjct: 1251 VQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSA 1310

Query: 231  CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
            C+    G+ S+ +   D  F                G   ++   + L+D   + G +  
Sbjct: 1311 CSH--SGLFSEAYKYFDAMFK-------------TYGITPEIEHYSCLVDALGRAGRIQE 1355

Query: 291  AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
            AE + +++P ++  S           Y++                        +L AC  
Sbjct: 1356 AENVIASMPFKASASM----------YRA------------------------LLGACRT 1381

Query: 351  SGDIKTGREMFDSMPS--PSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGVKPD 403
             GD +T + + D + +  PS SS   +LS+ Y+ S    +       M+ + VK D
Sbjct: 1382 KGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKD 1437



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            GK +HA++++     D F+   L+++Y KC +   A  +F KM  + +  WNA+L    +
Sbjct: 1219 GKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQ 1278

Query: 67   SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM-SNEGFVP 118
               ++ A  LF  M    +    V++  ++SA   +GL  +A   ++ M    G  P
Sbjct: 1279 HGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITP 1335


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 224/681 (32%), Positives = 357/681 (52%), Gaps = 65/681 (9%)

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
            V  WN LI   V+ GL +  L  Y +M   G++P H T   V KA   +  + HG   H
Sbjct: 91  TVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVH 150

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE---PNEVTFTAMMSGLAKTD 200
            +V   GL  N+++ N+++++Y +CG    A  +F+E+ E    + V++ ++++   +  
Sbjct: 151 AIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGG 210

Query: 201 RVVEALEM-FRLMIRKAVSI--DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
           +   AL + FR+    ++ +  D+++L ++L  CA         VFA          HG+
Sbjct: 211 QSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA--------SVFALQ--------HGK 254

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           QVH  +++ G   D+ + N+L+ MYAK   M+ A  +F  + ++ VVSWN M+ GY Q  
Sbjct: 255 QVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIG 314

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
               A+ L + M+    + D +T                               W+A+++
Sbjct: 315 SFDSALSLFKMMQEEDIKLDVIT-------------------------------WSAVIA 343

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y+Q  +  EA+ +FR+MQ  G++P+  TLA +LS CA++G L  GKQ HA  +K   ++
Sbjct: 344 GYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNL 403

Query: 438 -------DNYVASGLIGIYSKCQRNELAERVFHRIPELD--IVCWNSMIAGLSLNSLDIE 488
                  D  V +GLI +Y+KC+   +A  +F  I   D  +V W  MI G + +    +
Sbjct: 404 NWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEAND 463

Query: 489 AFMFFKQM--RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA-QIEKDGYVNDIFVGSA 545
           A   F Q+  ++  + P  F+ +  L +CA+L     GRQ+HA  +  +     ++VG+ 
Sbjct: 464 ALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNC 523

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           LI+MY K GDI  AR  FD M  +N V+W  ++ GY  +G G+EA+ L+  M   G   D
Sbjct: 524 LIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVD 583

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            ITF+ +L ACSHSG+VD G+  F+ M    G+ P  +HY CM+D LGRAG  +EA  LI
Sbjct: 584 GITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELI 643

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
             M  +   V+W  LLS+ R+HAN+ L + AA +L  L  +N   Y+LL+N+Y++  RW 
Sbjct: 644 KNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWK 703

Query: 726 DLRAVRELMSENCIVKDPAYS 746
           D+  +R LM    I K P  S
Sbjct: 704 DVARIRSLMKHTGIRKRPGCS 724


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/624 (33%), Positives = 331/624 (53%), Gaps = 52/624 (8%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAV 217
           N +L    K G   +A  +F++M + +E+++T ++SG        EAL +F ++ +   +
Sbjct: 5   NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
            +D   LS  L     + CG+   V             G+ +H  ++K  F   + + ++
Sbjct: 65  HMDPFILSLAL-----KACGLNMSV-----------SFGESLHGYSVKTDFVNSVFVGSA 108

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L+DMY K G +D   ++F  +P R+VVSW  +IAG  +   + +A+     M       D
Sbjct: 109 LVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCD 168

Query: 338 EVTSINMLVACVRSGDIKTGRE-----------------------------------MFD 362
             T  + L AC  SG +  GRE                                   +F+
Sbjct: 169 TYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFE 228

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
           SM    V SW  ++ S  Q    + A+K FR M+   V P+  T A ++S CA +G +E 
Sbjct: 229 SMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEW 288

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           G+Q+HA  ++        VA+ ++ +YSKC + +LA  VF  +   DI+ W++MI+G + 
Sbjct: 289 GEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQ 348

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
                EAF +   MR+    P +F+FA+VLS C  ++   QG+Q+HA +   G   +  V
Sbjct: 349 GGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMV 408

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            SALI MY KCG I  A + FD     N V+W  MI+GYA++GY  EA+ L+K +   G+
Sbjct: 409 QSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGL 468

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
           +PD +TF+A+L ACSH+GLVD+G   FNS+   H + P  DHY CMID L RAG  ++AE
Sbjct: 469 RPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAE 528

Query: 663 MLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
            +I  MP + D V+W  LL +CR+H +V   KRAAE++ +LDP  +  +  LAN+Y++ G
Sbjct: 529 SMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKG 588

Query: 723 RWDDLRAVRELMSENCIVKDPAYS 746
           +W +   VR++M    +VK+P +S
Sbjct: 589 KWKEAAEVRKMMKSKGVVKEPGWS 612



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 167/604 (27%), Positives = 264/604 (43%), Gaps = 85/604 (14%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GF 116
           N +L    K+  L  A +LFD+M +R+ +SW  +IS  V      +ALS+++KM  E G 
Sbjct: 5   NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
                 L+   KA    + V  G   HG  +K     +++V +AL+ +Y K G       
Sbjct: 65  HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VF+EM   N V++TA+++GL +     EAL  F  M  + V  D+ + SS L  CA  G 
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG- 183

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                         + N +G+++HC T+K GF A   ++N+L  MY K G +D    +F 
Sbjct: 184 --------------ALN-YGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFE 228

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
           ++ +R VVSW  +I    Q  Q   A++  +RM+     P+E T   ++  C   G I+ 
Sbjct: 229 SMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEW 288

Query: 357 GREM-----------------------------------FDSMPSPSVSSWNAMLSSYSQ 381
           G ++                                   F  +    + SW+ M+S Y+Q
Sbjct: 289 GEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQ 348

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
               +EA      M+  G +P+    A +LS C  M ILE GKQ+HA  L      +  V
Sbjct: 349 GGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMV 408

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            S LI +YSKC   + A ++F      +IV W +MI G + +    EA   FK++ +  +
Sbjct: 409 QSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGL 468

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P   +F  VL++C+           HA +   G+    F   + +   C   D YG   
Sbjct: 469 RPDSVTFIAVLAACS-----------HAGLVDLGF--HYFNSLSKVHQICPSKDHYGC-- 513

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
                          MI    + G  ++A  + + M     + DD+ +  +L AC   G 
Sbjct: 514 ---------------MIDLLCRAGRLNDAESMIQSM---PFQRDDVVWSTLLRACRIHGD 555

Query: 622 VDVG 625
           VD G
Sbjct: 556 VDCG 559



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 196/424 (46%), Gaps = 55/424 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   L+ G    +F+ N L  +Y+KC                              
Sbjct: 188 GREIHCQTLKKGFTAVSFVANTLATMYNKCGK---------------------------- 219

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L++  +LF+ M +R+VVSW  +I + V+ G EE A+  + +M      P   T A+V
Sbjct: 220 ---LDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAV 276

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 L  +E G + H  VI+ GL  ++ VAN+++++Y+KC     A  VF+ +S  + 
Sbjct: 277 ISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDI 336

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           ++++ M+SG A+     EA +    M R+    +  + +SVL VC          +  Q 
Sbjct: 337 ISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMA------ILEQ- 389

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+Q+H   + +G E +  + ++L++MY+K G +  A  IF      ++VSW
Sbjct: 390 ---------GKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSW 440

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             MI GY +   S +AI+L +++   G  PD VT I +L AC  +G +  G   F+S+  
Sbjct: 441 TAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSK 500

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                PS   +  M+    ++    +A  + + M F   + D    + +L +C   G ++
Sbjct: 501 VHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPF---QRDDVVWSTLLRACRIHGDVD 557

Query: 422 SGKQ 425
            GK+
Sbjct: 558 CGKR 561



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 177/398 (44%), Gaps = 85/398 (21%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHAH++R GL D   + N ++ +YSKC                    W         
Sbjct: 289 GEQLHAHVIRRGLVDSLSVANSIMAMYSKC--------------------WQ-------- 320

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A  +F  +  R+++SW+ +IS   + G  E+A    + M  EG  P     ASV
Sbjct: 321 ---LDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASV 377

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 +  +E G++ H  V+ +GL++N  V +AL+++Y+KCG  K A  +F+E    N 
Sbjct: 378 LSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNI 437

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM++G A+     EA+++F+ + +  +  DSV+  +VL  C+  G     D+    
Sbjct: 438 VSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGL---VDLGFHY 494

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            N  S+ VH         ++    D +    ++D+  + G ++ AE +  ++P       
Sbjct: 495 FNSLSK-VH---------QICPSKDHY--GCMIDLLCRAGRLNDAESMIQSMP------- 535

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-- 364
                                      F+ D+V    +L AC   GD+  G+   + +  
Sbjct: 536 ---------------------------FQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQ 568

Query: 365 --PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
             P+ +V+    + + Y+     KEA ++ + M+ +GV
Sbjct: 569 LDPNCAVTH-ITLANMYAAKGKWKEAAEVRKMMKSKGV 605


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 214/632 (33%), Positives = 338/632 (53%), Gaps = 54/632 (8%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KN    N ++S Y K G    A  +F+ M +   VT+T +M   A  +   EA ++FR M
Sbjct: 73  KNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQM 132

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
            R     D V+ +++L  C               ++   +N  GQ VH   +KLGF+ +L
Sbjct: 133 CRSCTLPDYVTFTTLLPGC---------------NDAVPQNAVGQ-VHAFAVKLGFDTNL 176

Query: 273 HLS--NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
            L+  N LL  Y +   +D A V+F  + ++  V++N +I GY +    T+AI L  +M+
Sbjct: 177 FLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMR 236

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTG--------------------------------- 357
             G +P + T   +L A V   D   G                                 
Sbjct: 237 QSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVL 296

Query: 358 --REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
             R +F+ MP     S+N ++SSYSQ+E ++E++ LFREMQ  G        A +LS  A
Sbjct: 297 ETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAA 356

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
            +  L+ G+QVH  ++   +    +V + L+ +Y+KC+  + AE +F  + +   V W +
Sbjct: 357 NLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTA 416

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           +I+G     L       F +MR   +   Q +FATVL + A  +S   G+Q+HA I + G
Sbjct: 417 LISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSG 476

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
            + ++F GS L++MY KCG I  A Q F+ M  +N V+WN +I  YA NG G+ A+  + 
Sbjct: 477 NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFT 536

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
            MI SG++PD ++ + +L ACSH G V+ G E F +M   +G+ P   HY CM+D LGR 
Sbjct: 537 KMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRN 596

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYSLL 714
           G F EAE L+DEMP + D ++W  +L++CR++ N  LA+RAAE+LF ++  +++A Y  +
Sbjct: 597 GRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSM 656

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +NIY++ G+W+++R V++ M E  I K PAYS
Sbjct: 657 SNIYAAAGKWENVRHVKKAMRERGIKKVPAYS 688



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 167/653 (25%), Positives = 284/653 (43%), Gaps = 96/653 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           A + + A I++ G   DT   N  +E   +     +A  ++D+MPHK+  S N ++S   
Sbjct: 27  ATRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYV 86

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K  DL  A  LFD MP+R VV+W  L+     N   ++A  ++ +M     +P ++T  +
Sbjct: 87  KMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTT 146

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIY--VANALLSLYAKCGWTKHAVPVFEEMSE 183
           +       +      + H   +K+G D N++  V N LL  Y +      A  +FEE+ +
Sbjct: 147 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILD 206

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + VTF  +++G  K     EA+ +F  M +        + S VL    +   G+    F
Sbjct: 207 KDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVL----KAVVGLHD--F 260

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
           A           GQQ+H L++  GF  D  + N +L  Y+K+  +     +F+ +PE   
Sbjct: 261 AL----------GQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDF 310

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----- 358
           VS+NV+I+ Y Q  Q  +++ L + M+  GF+        ML        ++ GR     
Sbjct: 311 VSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQ 370

Query: 359 -----------------------EMFD-------SMPSPSVSSWNAMLSSYSQSENHKEA 388
                                  EMFD       S+   S  SW A++S Y Q   H   
Sbjct: 371 AIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAG 430

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           +KLF +M+   ++ D++T A +L + A    L  GKQ+HA  +++ +  + +  SGL+ +
Sbjct: 431 LKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 490

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+KC   + A +VF  +P+ + V WN++I+  + N     A   F +M Q+ + P   S 
Sbjct: 491 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSI 550

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
             VL +C+                                    CG +    +FF  M  
Sbjct: 551 LGVLIACS-----------------------------------HCGFVEQGTEFFQAMSP 575

Query: 569 KNTVTWNE-----MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
              +T  +     M+    +NG   EA +L  +M     +PD+I + ++L AC
Sbjct: 576 IYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNAC 625



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 169/367 (46%), Gaps = 32/367 (8%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N+++    K +  + A  +F  + +R+ VSW  LIS  V+ GL    L ++ KM      
Sbjct: 384 NSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLR 443

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
               T A+V KAS     +  G++ H  +I+ G  +N++  + L+ +YAKCG  K AV V
Sbjct: 444 ADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 503

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           FEEM + N V++ A++S  A       A+  F  MI+  +  DSVS+  VL  C+   CG
Sbjct: 504 FEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSH--CG 561

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                F +   +F + +    ++ +T K    A       +LD+  +NG    AE +   
Sbjct: 562 -----FVEQGTEFFQAM--SPIYGITPKKKHYA------CMLDLLGRNGRFAEAEKLMDE 608

Query: 298 LP-ERSVVSWNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +P E   + W+ ++     Y  +  + +A E L  M+        V+  N+  A  +  +
Sbjct: 609 MPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWEN 668

Query: 354 I----KTGREM-FDSMPSPSVSSWNAMLSSYSQSE----NHKEAIK----LFREMQFRGV 400
           +    K  RE     +P+ S    N  +  +S ++    N  E +K    L  E++  G 
Sbjct: 669 VRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGY 728

Query: 401 KPDRTTL 407
           KPD +++
Sbjct: 729 KPDTSSV 735



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 27/266 (10%)

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H  ++ T + I  YV  G +           A  +F  +P+  +V W  ++   + N+  
Sbjct: 72  HKNTVSTNTMISGYVKMGDL---------SSARHLFDAMPDRTVVTWTILMGWYAGNNHF 122

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF--VGS 544
            EAF  F+QM ++   P   +F T+L  C          QVHA   K G+  ++F  V +
Sbjct: 123 DEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCN 182

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
            L++ YC+   +  A   F+ +  K++VT+N +I GY ++G   EA+ L+  M  SG KP
Sbjct: 183 VLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKP 242

Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH----- 659
            D TF  +L A        VG+  F   Q  HG+  +   ++       +  HF+     
Sbjct: 243 SDFTFSGVLKAV-------VGLHDFALGQQLHGLS-VTTGFSRDASVGNQILHFYSKHDR 294

Query: 660 --EAEMLIDEMPCKDDPVIWEVLLSS 683
             E   L +EMP + D V + V++SS
Sbjct: 295 VLETRNLFNEMP-ELDFVSYNVVISS 319


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 215/619 (34%), Positives = 333/619 (53%), Gaps = 70/619 (11%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLS---LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
           R  H  +IK GL    Y  + L+    L        +A+ VF+ + EPN + +  M  G 
Sbjct: 19  RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           A +   V AL ++  MI   +  +S +   +L  CA+      S  F +          G
Sbjct: 79  ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAK------SKAFRE----------G 122

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           QQ+H   +KLG + DL++  SL+ MY KNG  + A  +F     R VVS+  +I GY   
Sbjct: 123 QQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYAS- 181

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                             +G I + ++MFD +P   V SWNA++
Sbjct: 182 ----------------------------------NGYIXSAQKMFDEIPVKDVVSWNALI 207

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           S Y+++ N+KEA++LF+EM    VKPD +T+  +LS+CA    +E G+QVH       S 
Sbjct: 208 SGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVH-------SW 260

Query: 437 IDNY-------VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
           ID++       + + LI +Y KC   E A  +F  +   D++ WN++I G +  +L  EA
Sbjct: 261 IDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK--DGYVNDIFVGSALI 547
            + F++M ++   P + +  ++L +CA L +   GR +H  I+K   G  N   + ++LI
Sbjct: 321 LLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLI 380

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
           +MY KCGDI  A+Q FD M  ++  +WN MI G+A +G  + A  ++  M   G++PDDI
Sbjct: 381 DMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDI 440

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           TFV +L+ACSHSG++D+G  IF SM  D+ + P L+HY CMID LG +G F EAE +I+ 
Sbjct: 441 TFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINS 500

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
           M    D VIW  LL +C++H NV L +  A+ L +++PKNS  Y LL+NIY++ GRW+++
Sbjct: 501 MEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEV 560

Query: 728 RAVRELMSENCIVKDPAYS 746
              R L+++  + K P  S
Sbjct: 561 AKRRALLNDKGMKKVPGCS 579



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 234/468 (50%), Gaps = 30/468 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H H+L+ G   D ++   LI +Y K      A+ +FD+  H+D+ S+ A++
Sbjct: 117 KAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALI 176

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                +  +  A K+FDE+P ++VVSWN LIS     G  ++AL ++ +M      P   
Sbjct: 177 KGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDES 236

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ +V  A      +E GR+ H  +   G   N+ + NAL+ LY KCG  + A  +FE +
Sbjct: 237 TMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGL 296

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S  + +++  ++ G    +   EAL +F+ M+R   S + V++ S+L  CA  G     D
Sbjct: 297 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGA---ID 353

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKL--GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           +             G+ +H    K   G      L  SL+DMYAK GD+++A+ +F ++ 
Sbjct: 354 I-------------GRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSML 400

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            RS+ SWN MI G+    ++  A ++  RM+  G EPD++T + +L AC  SG +  GR 
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRH 460

Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +F SM      +P +  +  M+     S   KEA ++   M+   + PD      +L +C
Sbjct: 461 IFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSME---MDPDGVIWCSLLKAC 517

Query: 415 AAMGILESGKQVHAASLKT-ASHIDNYVASGLIGIYSKCQR-NELAER 460
              G +E G+      +K    +  +YV   L  IY+   R NE+A+R
Sbjct: 518 KMHGNVELGESFAQNLIKIEPKNSGSYVL--LSNIYATAGRWNEVAKR 563



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 219/487 (44%), Gaps = 112/487 (22%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           +++HA +++ GL +  +  ++LIE                           ++LS     
Sbjct: 19  RIIHAKMIKTGLHNTNYALSKLIEF--------------------------SVLSPHF-- 50

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D L +A  +FD + E N++ WN +      +     AL +Y  M + G VP   T   + 
Sbjct: 51  DGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLL 110

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA         G++ HG V+K+G D ++YV  +L+++Y K G  + A  VF++ S  + V
Sbjct: 111 KACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVV 170

Query: 188 TFT-------------------------------AMMSGLAKTDRVVEALEMFRLMIRKA 216
           ++T                               A++SG A+T    EALE+F+ M++  
Sbjct: 171 SYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTN 230

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  ++ +VL  CA +   +E                G+QVH      GF ++L + N
Sbjct: 231 VKPDESTMVTVLSACA-QSASIEL---------------GRQVHSWIDDHGFGSNLKIVN 274

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D+Y K G++++A  +F  L  + V+SWN +I GY       +A+ L Q M   G  P
Sbjct: 275 ALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESP 334

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           +EVT +++L AC                                      + GDI+  ++
Sbjct: 335 NEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQ 394

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +FDSM + S+SSWNAM+  ++       A  +F  M+  G++PD  T   +LS+C+  G+
Sbjct: 395 VFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGM 454

Query: 420 LESGKQV 426
           L+ G+ +
Sbjct: 455 LDLGRHI 461


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 221/776 (28%), Positives = 382/776 (49%), Gaps = 98/776 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H+ I+  GL  D ++ + LI +Y KC     A  +FD++P   +            
Sbjct: 72  GKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGV-----------S 120

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            DD               V  WN++I    R G  E+ +  + +M + G+          
Sbjct: 121 VDD---------------VTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGY---------- 155

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
                     + G++ H  +++  L+ + ++  AL+  Y KCG    A  +F+++ +  N
Sbjct: 156 ----------KEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSN 205

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +  M+ G  +      +LE + L   + V + S S +  L  C +            
Sbjct: 206 IVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQ------------ 253

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
              +F     G+QVHC  IK+GFE D ++  SLL MY K   ++SAE +F+ +P++ +  
Sbjct: 254 --GEFVS--FGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIEL 309

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------- 358
           WN +I+ Y     +  A+ + ++MK C    D  T +N+L +   +G    GR       
Sbjct: 310 WNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIV 369

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +F +M    V +W +++S + Q+  +KEA+ 
Sbjct: 370 KRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALD 429

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            FR M+   VKPD   +A I+S+C  +  ++ G  +H   +K+   +D +VAS L+ +YS
Sbjct: 430 FFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYS 489

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           K    E A  +F  +P  ++V WNS+I+    N+L   +   F Q+ +N++YP   SF +
Sbjct: 490 KFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTS 549

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           VL++ + +++  +G+ VH  + +     D+ V + LI+MY KCG +  A+  F+ +  KN
Sbjct: 550 VLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKN 609

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V WN MI GY  +G   +A+ L+ +M +SG+KPDD+TF+++L++C+HSGL++ G+ +F 
Sbjct: 610 LVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFE 669

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
            M++  G+EP ++HY  ++D  GRAG   +A   +  MP + D  IW  LL SC++H N+
Sbjct: 670 MMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNL 729

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            L +  A +L  ++P   + Y  L N+Y     WD    +R  M E  + K P  S
Sbjct: 730 ELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCS 785



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 169/663 (25%), Positives = 291/663 (43%), Gaps = 105/663 (15%)

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           I +LV+     +AL +Y K        T  T  S+ KA  +L ++++G+  H  +I  GL
Sbjct: 28  IKSLVQQRQYIEALKLYTK---SPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
             + Y+ ++L+++Y KCG    AV VF+++                              
Sbjct: 85  HSDQYITSSLINIYVKCGTFTDAVKVFDQLP----------------------------- 115

Query: 212 MIRKAVSIDSVSL-SSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
             +  VS+D V++ +S++    R G  +E  +      + S    G+Q+H   ++     
Sbjct: 116 --KSGVSVDDVTIWNSIIDGYFRFG-QLEEGMVQFGRMQSSGYKEGKQIHSYIVRNMLNF 172

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVSWNVMIAGYGQK-----------YQ 318
           D  L  +L+D Y K G    A  +F  L +RS +V+WNVMI G+G+              
Sbjct: 173 DPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLA 232

Query: 319 STKAIELLQRMKSC------------------------GFEPDEVTSINMLVACVRSGDI 354
            T+ ++++    +C                        GFE D     ++L    +   I
Sbjct: 233 KTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMI 292

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           ++  ++F+ +P   +  WNA++S+Y  +    +A++++++M+   V  D  T+  +L+S 
Sbjct: 293 ESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSS 352

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           +  G+ + G+ +H   +K        + S L+ +YSK   +  A  +F  + E D+V W 
Sbjct: 353 SMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWG 412

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           S+I+G   N    EA  FF+ M  + + P     A+++S+C  L     G  +H  + K 
Sbjct: 413 SVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKS 472

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G   D+FV S+L++MY K G    A   F  M  KN V WN +I  Y +N   D ++ L+
Sbjct: 473 GLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLF 532

Query: 595 KDMIASGVKPDDITFVAILTACS-----------HSGLV------DVGVE-IFNSMQLDH 636
             ++ + + PD ++F ++L A S           H  LV      D+ VE     M +  
Sbjct: 533 SQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKC 592

Query: 637 GVEPILDH------------YTCMIDCLGRAGHFHEAEMLIDEM---PCKDDPVIWEVLL 681
           G+     H            +  MI   G  G   +A  L DEM     K D V +  LL
Sbjct: 593 GLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLL 652

Query: 682 SSC 684
           SSC
Sbjct: 653 SSC 655



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 249/551 (45%), Gaps = 46/551 (8%)

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           +  L +  + +EAL+++    +  V     +  S+L  CA                  S 
Sbjct: 28  IKSLVQQRQYIEALKLY---TKSPVYTTRFTYPSLLKACA----------------SLSN 68

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-----VVSWN 307
             +G+ +H   I  G  +D ++++SL+++Y K G    A  +F  LP+       V  WN
Sbjct: 69  LQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWN 128

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEP---------------DEVTSINMLVACVRSG 352
            +I GY +  Q  + +    RM+S G++                D      ++    + G
Sbjct: 129 SIIDGYFRFGQLEEGMVQFGRMQSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCG 188

Query: 353 DIKTGREMFDSMPSPS-VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
                R +F  +   S + +WN M+  + ++   + +++ +   +   VK   ++    L
Sbjct: 189 RPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTL 248

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
           S+C     +  GKQVH  ++K     D YV + L+ +Y KCQ  E AE+VF+ +P+ +I 
Sbjct: 249 SACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIE 308

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
            WN++I+    N    +A   +KQM+   +    F+   VL+S +       GR +H +I
Sbjct: 309 LWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEI 368

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
            K    + I + SAL+ MY K GD   A   F  M  ++ V W  +I G+ QN    EA+
Sbjct: 369 VKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEAL 428

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
             ++ M A  VKPD     +I++AC+    VD+G  I +   +  G++  +   + ++D 
Sbjct: 429 DFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTI-HGFVIKSGLQLDVFVASSLLDM 487

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR-LAKRAAEELFRLD--PKNS 708
             + G    A  +  +MP K + V W  ++ SC    N+  L+     ++ R D  P + 
Sbjct: 488 YSKFGFPERAGNIFSDMPLK-NLVAWNSII-SCYCRNNLPDLSINLFSQVLRNDLYPDSV 545

Query: 709 APYSLLANIYS 719
           +  S+LA I S
Sbjct: 546 SFTSVLAAISS 556



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 64/113 (56%), Gaps = 4/113 (3%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + GK +H +++R  +  D  + N LI++Y KC     AQH+F+++  K++ +WN+++ 
Sbjct: 559 ALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIG 618

Query: 63  AQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
                 +   A +LFDEM    +    V++ +L+S+   +GL E+ L ++  M
Sbjct: 619 GYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMM 671


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 227/756 (30%), Positives = 364/756 (48%), Gaps = 88/756 (11%)

Query: 29  LIELYSKCNNTHSAQ----HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERN 84
           +I+L   C+N         HL       D    + +L+     ++L+ A+++     E  
Sbjct: 38  IIDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
            + WN L+   ++ G  ++ L  Y  M  +G +    T   +  A     DV+ G   HG
Sbjct: 98  SIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHG 157

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
            ++K G  +N  + N L+ LY+KCG  K    +FE+M+  + +++  M+S         E
Sbjct: 158 RILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYRE 217

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           AL++F  M+   V  D +++ S++  CA                K      G+++H   +
Sbjct: 218 ALDLFDEMLVSGVLPDEITMVSLVSTCA----------------KLKDLEMGKRLHLYIV 261

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV--VSWNVMIAGYGQKYQSTKA 322
                    L N L+DMY+K G MD A  + S   E  V  V W  +++GY         
Sbjct: 262 DNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGY--------- 312

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                     V+S  I   R++FD M   S+ SW  M+S Y Q 
Sbjct: 313 --------------------------VKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQG 346

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
             + E+++LF++M+F  V PD   L  +LS+C  +   + G+ VHA  +     +D ++ 
Sbjct: 347 GYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLG 406

Query: 443 SGLIGIYSKCQRNELAERVF-------------------------------HRIPELDIV 471
           + L+ +Y+KC + + A R F                               ++IPE DIV
Sbjct: 407 NALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIV 466

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
            WN+M+     + L  E+F  F +M+ + + P + +  ++LSSCAK+ +   G  V+  I
Sbjct: 467 SWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYI 526

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
           EK+    D  +G+ALI+MY KCG +  A + F  +  KN   W  M+  YA  G   EA+
Sbjct: 527 EKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAI 586

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
            LY +M   GVKPD +TF+A+L ACSH GLVD G + FN ++  + + P + HY CM+D 
Sbjct: 587 DLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDL 646

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           LGR GH  E    I+ MP + D  IW  L+ +CR H NV LA++A ++L  +DP N+  +
Sbjct: 647 LGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAH 706

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            LL+NIY+  GRWDD+  VR  + E  + K P +++
Sbjct: 707 VLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTM 742



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 240/543 (44%), Gaps = 115/543 (21%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  IL+ G   +  L N L+ LYSKC        LF+KM H+D+ SWN        
Sbjct: 152 GSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNT------- 204

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +IS  V  G+  +AL ++++M   G +P  IT+ S+
Sbjct: 205 ------------------------MISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSL 240

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG----------------- 169
                 L D+E G+R H  ++   L     + N L+ +Y+KCG                 
Sbjct: 241 VSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEV 300

Query: 170 ----WTK------------HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
               WT              A  +F++M+E + V++T MMSG  +     E+LE+F+ M 
Sbjct: 301 DVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMR 360

Query: 214 RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
            + V  D V+L +VL  C      V  + F            G+ VH   +  G   D  
Sbjct: 361 FENVIPDEVALVTVLSAC------VHLEDFDL----------GRSVHAFIVTYGMLVDGF 404

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           L N+LLD+YAK G +D A   F  LP +S  SWN M+ G+                    
Sbjct: 405 LGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGF-------------------- 444

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                           RSG +   R+ F+ +P   + SWN M+++Y + +   E+ ++F 
Sbjct: 445 ---------------CRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFC 489

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           +MQ   VKPD+TTL  +LSSCA +G L  G  V+    K    ID  + + LI +Y KC 
Sbjct: 490 KMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCG 549

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
             E+A  +F +I E ++  W +M+A  ++    +EA   + +M +  + P   +F  +L+
Sbjct: 550 CVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLA 609

Query: 514 SCA 516
           +C+
Sbjct: 610 ACS 612



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 129/234 (55%), Gaps = 10/234 (4%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA I+  G+  D FL N L++LY+KC     A   F+++P K   SWN++L   C+
Sbjct: 387 GRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCR 446

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S  ++ A   F+++PE+++VSWN +++A V++ L  ++  ++ KM +    P   TL S+
Sbjct: 447 SGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISL 506

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKN-----IYVANALLSLYAKCGWTKHAVPVFEEM 181
             +   +     G   HG+ + + ++KN       +  AL+ +Y KCG  + A  +F ++
Sbjct: 507 LSSCAKV-----GALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQI 561

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            E N   +TAMM+  A   + +EA++++  M  + V  D V+  ++L  C+  G
Sbjct: 562 IEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGG 615


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/576 (35%), Positives = 321/576 (55%), Gaps = 53/576 (9%)

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +A+ VF  + EPN++ +  M+ G A +   V AL+++ +MI   +  +S +   +L  CA
Sbjct: 18  YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCA 77

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
           +      S  F +          GQQ+H   +KLG+E DL++  SL+ MYA+NG ++ A 
Sbjct: 78  K------SKAFEE----------GQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAH 121

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F     R VVS+  +I GY                                     SG
Sbjct: 122 KVFDRSSHRDVVSYTALITGYAS-----------------------------------SG 146

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           +I++ +EMFD +P   V SWNAM+S Y+++ ++KEA++LF+EM    V+PD  T+  +LS
Sbjct: 147 NIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLS 206

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +CA    +E G+QVH+         +  + + LI +YSKC + E A  +F  +   D+V 
Sbjct: 207 ACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVS 266

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           WN++I G +  +L  EA + F++M ++   P   +  ++L +CA L +   GR +H  I+
Sbjct: 267 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYID 326

Query: 533 KD--GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           K      N   + ++LI+MY KCGDI  A Q F+ M  K+  +WN MI G+A +G  +  
Sbjct: 327 KKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAG 386

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
             L+  M  +G++PDDITFV +L+ACSHSG +D+G  IF SM  D+ + P L+HY CMID
Sbjct: 387 FDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMID 446

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            LG +G F EA+ +I  MP + D VIW  LL +CR H N+ LA+  A  L +++P+N   
Sbjct: 447 LLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGS 506

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y LL+NIY++ G WD++  VR L++   + K P  S
Sbjct: 507 YVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCS 542



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 215/426 (50%), Gaps = 24/426 (5%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H H+L+ G   D ++   LI +Y++      A  +FD+  H+D+ S+ A++
Sbjct: 80  KAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALI 139

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +    S ++  A ++FDE+P ++VVSWN +IS     G  ++AL ++ +M      P   
Sbjct: 140 TGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEG 199

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ +V  A      VE GR+ H  +   G   N+ + NAL+ LY+KCG  + A  +FE +
Sbjct: 200 TMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGL 259

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC-GVES 240
           S  + V++  ++ G    +   EAL +F+ M+R   S + V++ S+L  CA  G   +  
Sbjct: 260 SCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGR 319

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
            +    D K     +                  L  SL+DMYAK GD+++A  +F+++  
Sbjct: 320 WIHVYIDKKLKDVTNAPS---------------LRTSLIDMYAKCGDIEAAHQVFNSMLH 364

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           +S+ SWN MI G+    ++    +L  RM+  G EPD++T + +L AC  SG +  GR +
Sbjct: 365 KSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI 424

Query: 361 FDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
           F SM      +P +  +  M+     S   KEA ++ + M    ++PD      +L +C 
Sbjct: 425 FKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMP---MEPDGVIWCSLLKACR 481

Query: 416 AMGILE 421
             G LE
Sbjct: 482 RHGNLE 487



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 195/428 (45%), Gaps = 86/428 (20%)

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D   +A  +F  + E N + WN ++     +     AL +Y  M + G +P   T   + 
Sbjct: 14  DGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLL 73

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K+       E G++ HG V+K+G + ++YV  +L+S+YA+ G  + A  VF+  S  + V
Sbjct: 74  KSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVV 133

Query: 188 TFT-------------------------------AMMSGLAKTDRVVEALEMFRLMIRKA 216
           ++T                               AM+SG A+T    EALE+F+ M++  
Sbjct: 134 SYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTN 193

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLS 275
           V  D  ++ +VL  CA+                 SR+V  G+QVH      GF ++L + 
Sbjct: 194 VRPDEGTMVTVLSACAQ-----------------SRSVELGRQVHSWIDDHGFGSNLKIV 236

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+L+D+Y+K G +++A  +F  L  + VVSWN +I GY       +A+ L Q M   G  
Sbjct: 237 NALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGES 296

Query: 336 PDEVTSINMLVAC-------------------------------------VRSGDIKTGR 358
           P++VT +++L AC                                      + GDI+   
Sbjct: 297 PNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAH 356

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           ++F+SM   S+SSWNAM+  ++          LF  M+  G++PD  T   +LS+C+  G
Sbjct: 357 QVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSG 416

Query: 419 ILESGKQV 426
            L+ G+ +
Sbjct: 417 KLDLGRHI 424


>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
 gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
          Length = 860

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 239/829 (28%), Positives = 382/829 (46%), Gaps = 138/829 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN-------- 58
           GK +H  I  +    DT L N L+ LY+KC +   ++ +F+ M  + + +WN        
Sbjct: 49  GKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQ 108

Query: 59  ------------------------AILSAQCKSDDLEF---------------------- 72
                                   ++L A C  DDLE                       
Sbjct: 109 HDFFQEALEAFRRMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQ 168

Query: 73  ---------------AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
                          A ++F  +  +N  SW  +I+A  +NG E +A+ V+  M +EG V
Sbjct: 169 NSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRV 228

Query: 118 -PTHITLASVFKASTALLDVEHGRRCHGLVIKI---GLDKNIYVANALLSLYAKCGWTKH 173
            P  IT A V  A + L D+E G R H L+ +I   GL+ +  + + +LSL+A+CG    
Sbjct: 229 EPDPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVG 288

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
              +F+ M     VT+T M++   +    +EALE++  M    +  D ++LS+VL  C+R
Sbjct: 289 TREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSR 345

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
                                 G+ VH       FE  L +   L+DMY K GD+  A  
Sbjct: 346 ----------------LKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARR 389

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
            F     R V+SW  +I  Y  +    +A+E+   M+  G EP+ +T   ++ AC R   
Sbjct: 390 TFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSS 449

Query: 354 IKTGREM-----------------------------------FDSMPSPSVSSWNAMLSS 378
           +  GR +                                   FDS+P     SW  ML +
Sbjct: 450 LLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVA 509

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
            +Q+ +  EA++++  +   G +P     +  L SC A+  +   + +H     +  + D
Sbjct: 510 LTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPD 569

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
             +++ L+ +Y+KC   E A  VF ++ E + V W +MI G + N    EA   +K M  
Sbjct: 570 LVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAM-- 627

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
            ++ P   +F  V+SSCA L +  +G++VHA++   G  N+  + +AL+ MY KCG +  
Sbjct: 628 -DVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGL 686

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           AR+FFD  +  +   WN M   YAQ G+G + + LY++M   GV+P+ IT +++L ACSH
Sbjct: 687 AREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSH 746

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD-----D 673
            G+++     F  M  DHG+ P  +HY+CM D LGR+G   EAE ++     +       
Sbjct: 747 MGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAAS 806

Query: 674 PV---IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           PV    W   L +C+ H +   A  AAE+L+ LDP++SAPY LL+  YS
Sbjct: 807 PVAVSAWMSFLGACKTHNDWGRAAGAAEKLYELDPEDSAPYVLLSQTYS 855



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 184/636 (28%), Positives = 291/636 (45%), Gaps = 73/636 (11%)

Query: 91  LISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG 150
           +ISA  + G   +AL +Y +M   G  P   T A V  A   L D+E G++ H  + +  
Sbjct: 1   MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
              +  + NALL+LYAKCG  + +  +FE M      T+  M++   + D   EALE FR
Sbjct: 61  ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
              R      S++ +SVLG C    C  +     ++     R + G            +A
Sbjct: 121 ---RMDAPPSSITFTSVLGAC----CSPDD---LETGKAIHRQIGGSSPQ-------IQA 163

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           D  L NSL+ MY K G ++ AE +F  +  ++  SW  MI  Y Q     +AIE+   M 
Sbjct: 164 DEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMM 223

Query: 331 SCG-FEPDEVTSINMLVACVRSGDIKTG-------------------------------- 357
           S G  EPD +T   +L AC   GD++TG                                
Sbjct: 224 SEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARC 283

Query: 358 ------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
                 REMFD MP  +V +W  M+++Y+Q     EA++L+  M    ++PD   L+ +L
Sbjct: 284 GSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMD---IEPDDIALSNVL 340

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
            +C+ +  LE G+ VH+            V + L+ +Y KC     A R F      D++
Sbjct: 341 QACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVI 400

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
            W S+I   S  +   EA   F  M    + P   +F TV+ +C++LSS   GR +H+++
Sbjct: 401 SWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRV 460

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
              G+++D FVG+AL+ MY K G +  AR  FD +  K   +W  M+    QNG+  EA+
Sbjct: 461 VATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEAL 520

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY------ 645
            +Y  +   G +P    F A L +C+        +E  +  +  HGV    D Y      
Sbjct: 521 EMYSRIHLEGFRPGSPIFSAALVSCT-------ALEDVSRARAIHGVIKSSDFYPDLVLS 573

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
             +++   + G   +A ++ D+M  K++ V W  ++
Sbjct: 574 NVLMNVYAKCGELEKARLVFDQMTEKNE-VSWTTMI 608



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 188/372 (50%), Gaps = 26/372 (6%)

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+S+Y+Q   H+EA++L+ EM  RGV P+  T A +LS+CA +  +E GK+VH    ++ 
Sbjct: 1   MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
           + +D  + + L+ +Y+KC   E + R+F  +    +  WN+MI     +    EA   F+
Sbjct: 61  ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI--EKDGYVNDIFVGSALIEMYCK 552
           +M   +  P+  +F +VL +C        G+ +H QI         D  + ++L+ MY K
Sbjct: 121 RM---DAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGK 177

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VKPDDITFVA 611
           CG +  A + F  +  KN  +W  MI  YAQNGY   A+ ++ DM++ G V+PD IT+  
Sbjct: 178 CGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAG 237

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPI-LDHYTCMIDCL----GRAGHFHEAEMLID 666
           +LTACS  G ++ G+ I     L H +  + L++   + D +     R G       + D
Sbjct: 238 VLTACSTLGDLETGMRIH---ALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFD 294

Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR---LDPKNSAPYSLLANIYSSLGR 723
            MP +   V W  ++++     N R     A EL+    ++P + A    L+N+  +  R
Sbjct: 295 RMPHR-TVVTWTTMIAA----YNQRGYSMEALELYHCMDIEPDDIA----LSNVLQACSR 345

Query: 724 WDDLRAVRELMS 735
             +L   R + S
Sbjct: 346 LKNLEQGRAVHS 357



 Score = 42.4 bits (98), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 38/150 (25%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V G+ +HA +   GL ++  +   L+ +Y+KC     A+  FD     D  +WN++ +
Sbjct: 648 ALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMAT 707

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                     AY  F                     G   + L +Y +M  +G  P  IT
Sbjct: 708 ----------AYAQF---------------------GHGSQVLELYREMCLQGVQPNGIT 736

Query: 123 LASVFKAST---ALLDVEHGRRC----HGL 145
           L SV  A +    L + EH   C    HG+
Sbjct: 737 LLSVLVACSHMGMLEECEHRFECMVADHGI 766


>gi|302796316|ref|XP_002979920.1| hypothetical protein SELMODRAFT_111891 [Selaginella moellendorffii]
 gi|300152147|gb|EFJ18790.1| hypothetical protein SELMODRAFT_111891 [Selaginella moellendorffii]
          Length = 719

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/676 (31%), Positives = 365/676 (53%), Gaps = 23/676 (3%)

Query: 51  HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
           H+ I +  A+L+A  K  DLE A  +F  M ER+++SW  LI+   + G   +AL +Y +
Sbjct: 60  HEKIVA-TALLNAYGKCGDLESAGAIFRGMEERDLISWTALITGYAQFGHSRQALDLYRE 118

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M  +G  P+ IT  S+  A T L  +      H  + + G  + + + N ++ +Y +CG 
Sbjct: 119 MLMDGVSPSRITFLSLLSACTKLGSLREASLVHDHIRQSGNQQGLSIQNGVVCMYHRCGS 178

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            ++A  VF+ M   + +++T+M++  A++    +A+ ++R M  +    + V+  + +  
Sbjct: 179 VENAKLVFDAMPRRDVISWTSMIAAYAQSGSCDDAIRLYRRMELEGEKPNKVTFLAAMEA 238

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG-DMD 289
           CA+                 +     + +H   I+ G E D+ ++ +L++MY K+   + 
Sbjct: 239 CAK---------------SLAPEEEAEALHRCVIESGLETDVVVATALVNMYGKSARTLG 283

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
            A+ IF  + +R  V WN +IA Y Q     +A++LL++M+   FE D +    ++    
Sbjct: 284 RAQEIFDGVEKRDNVVWNALIAAYAQHGCRDRALDLLEQMQRQSFESDSIVRNALMNMYG 343

Query: 350 RSGDIKTGREMFDSMPS-PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
           + G  +    +F++ P   +V SWN +++ ++Q+  H+ ++ LF  MQ  GV  DR TL 
Sbjct: 344 KCGCAEDALRLFEASPRLQNVISWNTVIAVHAQNGEHQRSMVLFHRMQLAGVPADRATLL 403

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
            +L +C     L +G+ V   + +   H +    + L+ +++KC+  + A  VF  +   
Sbjct: 404 TVLYACTNPAALRTGRIVRELATQRGYHHEVKFQTALVLMHAKCETLDAAVEVFESMHHR 463

Query: 469 DIVCWNSMIAGL-----SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
           D   WN+M+A       SLN    E+F   +QM+ +   P   +  TVLS+CA  S+  +
Sbjct: 464 DTPSWNAMVAAYGYHACSLNGRWKESFKLLQQMQVDGAVPDTVTLVTVLSACAAGSAIAK 523

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           GR VH    ++G ++D+ V + +++ Y KCG +  AR   D M   + VTWN ++ GYAQ
Sbjct: 524 GRAVHRFAAENGLMSDVAVANGVVDFYGKCGCLLEARAVLDKMAKLDEVTWNSLLAGYAQ 583

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
           +GYG E +  + +M   G   + ITF+++L ACSH GLV  G + F+SM  D+G +PI +
Sbjct: 584 HGYGVETLEAFTEMQHRGYSANRITFMSVLHACSHVGLVAEGCKYFSSMIGDYGFQPIEE 643

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
           H  CMID LGRAGH  EA+ML+  MP K + + W  LL SC++H N+ L + AA ++   
Sbjct: 644 HCGCMIDLLGRAGHLSEAKMLLARMPFKPNLIAWMSLLGSCKVHGNLELGRDAALKVLEF 703

Query: 704 DPKNSAPYSLLANIYS 719
           DP+N+A + LL+ I +
Sbjct: 704 DPENAAAHMLLSEIVT 719



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 161/611 (26%), Positives = 291/611 (47%), Gaps = 39/611 (6%)

Query: 91  LISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG 150
           +I+A  ++G   +A +++ K+   G +P  I L +   +  A   V   R  H    +I 
Sbjct: 1   MITANAQSGNYTQAFALFQKLHVHGVLPNQIALVATLNSCLADHQV---RSVHECAREIH 57

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
            +    VA ALL+ Y KCG  + A  +F  M E + +++TA+++G A+     +AL+++R
Sbjct: 58  CEHEKIVATALLNAYGKCGDLESAGAIFRGMEERDLISWTALITGYAQFGHSRQALDLYR 117

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            M+   VS   ++  S+L  C + G   E+ +                VH    + G + 
Sbjct: 118 EMLMDGVSPSRITFLSLLSACTKLGSLREASL----------------VHDHIRQSGNQQ 161

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
            L + N ++ MY + G +++A+++F  +P R V+SW  MIA Y Q      AI L +RM+
Sbjct: 162 GLSIQNGVVCMYHRCGSVENAKLVFDAMPRRDVISWTSMIAAYAQSGSCDDAIRLYRRME 221

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGRE-----MFDSMPSPSVSSWNAMLSSYSQSENH 385
             G +P++VT +  + AC +S   +   E     + +S     V    A+++ Y +S   
Sbjct: 222 LEGEKPNKVTFLAAMEACAKSLAPEEEAEALHRCVIESGLETDVVVATALVNMYGKS--- 278

Query: 386 KEAIKLFREMQ-FRGV-KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
             A  L R  + F GV K D      ++++ A  G  +    +     + +   D+ V +
Sbjct: 279 --ARTLGRAQEIFDGVEKRDNVVWNALIAAYAQHGCRDRALDLLEQMQRQSFESDSIVRN 336

Query: 444 GLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
            L+ +Y KC   E A R+F   P L +++ WN++IA  + N     + + F +M+   + 
Sbjct: 337 ALMNMYGKCGCAEDALRLFEASPRLQNVISWNTVIAVHAQNGEHQRSMVLFHRMQLAGVP 396

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
             + +  TVL +C   ++   GR V     + GY +++   +AL+ M+ KC  +  A + 
Sbjct: 397 ADRATLLTVLYACTNPAALRTGRIVRELATQRGYHHEVKFQTALVLMHAKCETLDAAVEV 456

Query: 563 FDMMHGKNTVTWNEMIHGYAQ-----NGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
           F+ MH ++T +WN M+  Y       NG   E+ +L + M   G  PD +T V +L+AC+
Sbjct: 457 FESMHHRDTPSWNAMVAAYGYHACSLNGRWKESFKLLQQMQVDGAVPDTVTLVTVLSACA 516

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
               +  G  + +    ++G+   +     ++D  G+ G   EA  ++D+M  K D V W
Sbjct: 517 AGSAIAKGRAV-HRFAAENGLMSDVAVANGVVDFYGKCGCLLEARAVLDKMA-KLDEVTW 574

Query: 678 EVLLSSCRLHA 688
             LL+    H 
Sbjct: 575 NSLLAGYAQHG 585



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 182/354 (51%), Gaps = 6/354 (1%)

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+++ +QS N+ +A  LF+++   GV P++  L   L+SC A   + S   VH  + +  
Sbjct: 1   MITANAQSGNYTQAFALFQKLHVHGVLPNQIALVATLNSCLADHQVRS---VHECAREIH 57

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              +  VA+ L+  Y KC   E A  +F  + E D++ W ++I G +      +A   ++
Sbjct: 58  CEHEKIVATALLNAYGKCGDLESAGAIFRGMEERDLISWTALITGYAQFGHSRQALDLYR 117

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           +M  + + P++ +F ++LS+C KL S  +   VH  I + G    + + + ++ MY +CG
Sbjct: 118 EMLMDGVSPSRITFLSLLSACTKLGSLREASLVHDHIRQSGNQQGLSIQNGVVCMYHRCG 177

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
            +  A+  FD M  ++ ++W  MI  YAQ+G  D+A+RLY+ M   G KP+ +TF+A + 
Sbjct: 178 SVENAKLVFDAMPRRDVISWTSMIAAYAQSGSCDDAIRLYRRMELEGEKPNKVTFLAAME 237

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH-FHEAEMLIDEMPCKDD 673
           AC+ S   +   E  +   ++ G+E  +   T +++  G++      A+ + D +  K D
Sbjct: 238 ACAKSLAPEEEAEALHRCVIESGLETDVVVATALVNMYGKSARTLGRAQEIFDGVE-KRD 296

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLD-PKNSAPYSLLANIYSSLGRWDD 726
            V+W  L+++   H     A    E++ R     +S   + L N+Y   G  +D
Sbjct: 297 NVVWNALIAAYAQHGCRDRALDLLEQMQRQSFESDSIVRNALMNMYGKCGCAED 350



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 211/508 (41%), Gaps = 124/508 (24%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           L+H HI ++G      + N ++ +Y +C +  +A+ +FD MP +D+ SW ++        
Sbjct: 149 LVHDHIRQSGNQQGLSIQNGVVCMYHRCGSVENAKLVFDAMPRRDVISWTSM-------- 200

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT-LASVF 127
                                  I+A  ++G  + A+ +Y +M  EG  P  +T LA++ 
Sbjct: 201 -----------------------IAAYAQSGSCDDAIRLYRRMELEGEKPNKVTFLAAME 237

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT-KHAVPVFEEMSEPNE 186
             + +L   E     H  VI+ GL+ ++ VA AL+++Y K   T   A  +F+ + + + 
Sbjct: 238 ACAKSLAPEEEAEALHRCVIESGLETDVVVATALVNMYGKSARTLGRAQEIFDGVEKRDN 297

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
           V + A+++  A+      AL++   M R++   DS+  ++++ +  + GC  ++  +F  
Sbjct: 298 VVWNALIAAYAQHGCRDRALDLLEQMQRQSFESDSIVRNALMNMYGKCGCAEDALRLFEA 357

Query: 246 S---DNKFSRN----VHGQQ---------------------------------------- 258
           S    N  S N    VH Q                                         
Sbjct: 358 SPRLQNVISWNTVIAVHAQNGEHQRSMVLFHRMQLAGVPADRATLLTVLYACTNPAALRT 417

Query: 259 ---VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
              V  L  + G+  ++    +L+ M+AK   +D+A  +F ++  R   SWN M+A YG 
Sbjct: 418 GRIVRELATQRGYHHEVKFQTALVLMHAKCETLDAAVEVFESMHHRDTPSWNAMVAAYGY 477

Query: 316 KYQS-----TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------- 357
              S      ++ +LLQ+M+  G  PD VT + +L AC     I  G             
Sbjct: 478 HACSLNGRWKESFKLLQQMQVDGAVPDTVTLVTVLSACAAGSAIAKGRAVHRFAAENGLM 537

Query: 358 ----------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                                 R + D M      +WN++L+ Y+Q     E ++ F EM
Sbjct: 538 SDVAVANGVVDFYGKCGCLLEARAVLDKMAKLDEVTWNSLLAGYAQHGYGVETLEAFTEM 597

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESG 423
           Q RG   +R T   +L +C+ +G++  G
Sbjct: 598 QHRGYSANRITFMSVLHACSHVGLVAEG 625



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 136/301 (45%), Gaps = 42/301 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++     + G   +      L+ +++KC    +A  +F+ M H+D  SWNA+++A   
Sbjct: 418 GRIVRELATQRGYHHEVKFQTALVLMHAKCETLDAAVEVFESMHHRDTPSWNAMVAA--- 474

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                + Y                   A   NG  +++  +  +M  +G VP  +TL +V
Sbjct: 475 -----YGYH------------------ACSLNGRWKESFKLLQQMQVDGAVPDTVTLVTV 511

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  A   +  GR  H    + GL  ++ VAN ++  Y KCG    A  V ++M++ +E
Sbjct: 512 LSACAAGSAIAKGRAVHRFAAENGLMSDVAVANGVVDFYGKCGCLLEARAVLDKMAKLDE 571

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+ ++++G A+    VE LE F  M  +  S + ++  SVL  C+  G      + A+ 
Sbjct: 572 VTWNSLLAGYAQHGYGVETLEAFTEMQHRGYSANRITFMSVLHACSHVG------LVAEG 625

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVS 305
              FS  +            GF+        ++D+  + G +  A+++ + +P + ++++
Sbjct: 626 CKYFSSMIG---------DYGFQPIEEHCGCMIDLLGRAGHLSEAKMLLARMPFKPNLIA 676

Query: 306 W 306
           W
Sbjct: 677 W 677


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 213/619 (34%), Positives = 332/619 (53%), Gaps = 70/619 (11%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLS---LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
           R  H  +IK GL    Y  + LL    L        +A+ VFE + EPN + +  M  G 
Sbjct: 19  RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           A +   V A++++  MI   +  +S +   +L  CA                K   +  G
Sbjct: 79  ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCA----------------KLKVSKEG 122

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           QQ+H   +KLG+E DL++  SL+ MY KNG    A  +F     R VVS+  +I GY  +
Sbjct: 123 QQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASR 182

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                              G I++ ++MFD +P   V SWNA++
Sbjct: 183 -----------------------------------GYIESAQKMFDEIPVKDVVSWNAII 207

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           S Y+ + N+KEA+ LF+EM    VKPD +T+  ++S+CA  G ++ G+QVH       S 
Sbjct: 208 SGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVH-------SW 260

Query: 437 IDNY-------VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
           ID++       + + LI +YSKC   E A  +F  +   D++ WN+MI G +  +L  EA
Sbjct: 261 IDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEA 320

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK--DGYVNDIFVGSALI 547
            + F++M ++   P   +  ++L +CA+L +   GR +H  I+K   G  N   + ++LI
Sbjct: 321 LLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLI 380

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
           +MY KCGDI  A Q F+ MH +     N MI G+A +G  + A  ++  M  +G++PDDI
Sbjct: 381 DMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDI 440

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           TFV +L+ACSHSG++D+G  IF SM  ++ + P L+HY CMID LG  G F EAE +I+ 
Sbjct: 441 TFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINT 500

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
           M  + D VIW  LL +C++H NV L +  A++L +++P+N   Y LL+NIY++ GRW+++
Sbjct: 501 MTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEV 560

Query: 728 RAVRELMSENCIVKDPAYS 746
             +R L+++  + K P  S
Sbjct: 561 ANIRALLNDKGMKKVPGCS 579



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 229/459 (49%), Gaps = 26/459 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H+L+ G   D ++   LI +Y K      A  +FD   H+D+ S+ A+++    
Sbjct: 122 GQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYAS 181

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A K+FDE+P ++VVSWN +IS     G  ++AL ++ +M      P   T+ +V
Sbjct: 182 RGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTV 241

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      ++ GR+ H  +   GL  N+ + NAL+ LY+KCG  + A  +F+ +S  + 
Sbjct: 242 VSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDV 301

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++  M+ G    +   EAL +F+ M+R   + + V++ S+L  CA+ G           
Sbjct: 302 ISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGA---------- 351

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
              F R +H   V+      G      L  SL+DMYAK GD+++A  +F+++  R++ + 
Sbjct: 352 -IDFGRWIH---VYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSAC 407

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N MI G+    ++  A ++  RM+  G EPD++T + +L AC  SG +  GR +F SM  
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQ 467

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               +P +  +  M+         KEA ++   M    ++PD      +L +C   G +E
Sbjct: 468 NYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMT---MEPDGVIWCSLLKACKMHGNVE 524

Query: 422 SGKQVHAASLKT-ASHIDNYVASGLIGIYSKCQR-NELA 458
            G+      +K    +  +YV   L  IY+   R NE+A
Sbjct: 525 LGESFAQKLIKIEPENPGSYVL--LSNIYATAGRWNEVA 561



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 217/487 (44%), Gaps = 112/487 (22%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           +++HA +++ GL +  +  +RL+E                            ILS     
Sbjct: 19  RIIHAQMIKTGLHNTNYALSRLLEF--------------------------CILSPNF-- 50

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D L +A  +F+ + E N++ WN +      +     A+ +Y  M + G +P   T   + 
Sbjct: 51  DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLL 110

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K+   L   + G++ HG V+K+G + ++YV  +L+S+Y K G  K A  VF+  S  + V
Sbjct: 111 KSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVV 170

Query: 188 TFTAM-------------------------------MSGLAKTDRVVEALEMFRLMIRKA 216
           ++TA+                               +SG A T    EAL++F+ M++  
Sbjct: 171 SYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTN 230

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  ++ +V+  CA+ G  ++                G+QVH      G  ++L + N
Sbjct: 231 VKPDESTMVTVVSACAQSG-SIQL---------------GRQVHSWIDDHGLGSNLKIVN 274

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D+Y+K G++++A  +F  L  + V+SWN MI GY       +A+ L Q M   G  P
Sbjct: 275 ALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENP 334

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           ++VT +++L AC                                      + GDI+   +
Sbjct: 335 NDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQ 394

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F+SM   ++S+ NAM+  ++       A  +F  M+  G++PD  T   +LS+C+  G+
Sbjct: 395 VFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGM 454

Query: 420 LESGKQV 426
           L+ G+++
Sbjct: 455 LDLGRRI 461



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 37/230 (16%)

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG---ARQFFDMM 566
           ++L +C  L S    R +HAQ+ K G  N  +  S L+E      +  G   A   F+ +
Sbjct: 7   SLLHNCKTLQSL---RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETI 63

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS--------- 617
              N + WN M  G+A +     A++LY  MI+ G+ P+  TF  +L +C+         
Sbjct: 64  QEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQ 123

Query: 618 --HSGLVDVGVEI-------FNSMQLDHG----VEPILD--------HYTCMIDCLGRAG 656
             H  ++ +G E+         SM + +G       + D         YT +I      G
Sbjct: 124 QIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRG 183

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK 706
           +   A+ + DE+P K D V W  ++S      N + A    +E+ + + K
Sbjct: 184 YIESAQKMFDEIPVK-DVVSWNAIISGYADTGNNKEALDLFKEMMKTNVK 232


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 224/724 (30%), Positives = 370/724 (51%), Gaps = 83/724 (11%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N+ L   C S +LE A K    M E  +    +   AL+R  L E         +  G+ 
Sbjct: 2   NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIR--LCE---------NKRGYS 50

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
                  +V  +   LL V  G                   NALLS++ + G   +A  V
Sbjct: 51  EGEYVWKAVLSSLVTLLSVRLG-------------------NALLSMFVRFGDVGNAWNV 91

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  M E +  ++  ++ G  K     EAL ++  ++   +  D  +  SVL  CA     
Sbjct: 92  FGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGA--- 148

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
              D+           V G++VH   ++  F+ D+ + N+L+ MY K GD+ SA ++F  
Sbjct: 149 --MDL-----------VRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDK 195

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +P R  +SWN MI+GY +  +  + +EL  RM+    +PD +T  +++ AC   GD + G
Sbjct: 196 MPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLG 255

Query: 358 REM-----------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
            ++                                   F  M    V SW  ++S    +
Sbjct: 256 TQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDN 315

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               +A++ ++ M+  G  PD  T+A +LS+CA++G L+ G ++H  + +T   +   VA
Sbjct: 316 LLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVA 375

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + LI +YSKC+R E A  +FH+IP+ D++ W S+I GL +N+   EA +FF++M      
Sbjct: 376 NSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSK- 434

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +  + LS+CA++ +   G+++HA   K G   D F+ +A++++Y +CG +  A   
Sbjct: 435 PNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQ 494

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F++ + K+   WN ++ GYAQ G G   + L+K M+ S + PDD+TF+++L ACS SG+V
Sbjct: 495 FNL-NEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMV 553

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
             G+E F  M++++ + P L HY C++D LGRAG  +EA   I+ MP K DP IW  LL+
Sbjct: 554 TEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLN 613

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           +CR+H +V L + AA+ +F+ D ++   Y LL N+Y+  G+WD++  VR  M E  ++ D
Sbjct: 614 ACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVD 673

Query: 743 PAYS 746
           P  S
Sbjct: 674 PGCS 677



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 202/413 (48%), Gaps = 57/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH++++R     +  + N LI++Y    +   A+ +F  M              +C 
Sbjct: 255 GTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGM--------------EC- 299

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                           R+VVSW  +IS  V N L +KAL  Y  M   G +P  +T+ASV
Sbjct: 300 ----------------RDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASV 343

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  +L  ++ G + H L  + G    + VAN+L+ +Y+KC   + A+ +F ++ + + 
Sbjct: 344 LSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDV 403

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++T++++GL   +R  EAL  FR MI K+   +SV+L S L  CAR G           
Sbjct: 404 ISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGA---------- 452

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                  + G+++H   +K G   D  L N++LD+Y + G M +A   F NL E+ V +W
Sbjct: 453 ------LMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NLNEKDVGAW 505

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N+++ GY QK +    +EL +RM      PD+VT I++L AC RSG +  G E F  M  
Sbjct: 506 NILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKV 565

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               +P++  +  ++    ++    EA +    M    +KPD      +L++C
Sbjct: 566 NYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMP---IKPDPAIWGALLNAC 615



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 222/512 (43%), Gaps = 90/512 (17%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +HAH++R     D  + N LI +Y KC +  SA+                     
Sbjct: 152 VRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSAR--------------------- 190

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                      LFD+MP R+ +SWN +IS    N    + L ++ +M      P  +T+ 
Sbjct: 191 ----------MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMT 240

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV  A   L D   G + H  V++   D NI V N+L+ +Y   G  K A  VF  M   
Sbjct: 241 SVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECR 300

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++T ++SG        +ALE ++ M       D V+++SVL  CA  G         
Sbjct: 301 DVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLG--------- 351

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           Q D        G ++H L  + G    + ++NSL+DMY+K   ++ A  IF  +P++ V+
Sbjct: 352 QLD-------MGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVI 404

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRM--KSCGFEPDEVTSINMLVACVRSGDIKTGREM-- 360
           SW  +I G     +  +A+   ++M  KS   +P+ VT I+ L AC R G +  G+E+  
Sbjct: 405 SWTSVINGLRINNRCFEALIFFRKMILKS---KPNSVTLISALSACARVGALMCGKEIHA 461

Query: 361 --------FD------------------------SMPSPSVSSWNAMLSSYSQSENHKEA 388
                   FD                        ++    V +WN +L+ Y+Q       
Sbjct: 462 HALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLNEKDVGAWNILLTGYAQKGKGAMV 521

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLI 446
           ++LF+ M    + PD  T   +L +C+  G++  G + +   +K   HI   +   + ++
Sbjct: 522 MELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLE-YFQRMKVNYHITPNLKHYACVV 580

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMI 477
            +  +  +   A     R+P + D   W +++
Sbjct: 581 DLLGRAGKLNEAHEFIERMPIKPDPAIWGALL 612



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 9/124 (7%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + GK +HAH L+ G+  D FL N +++LY +C    +A + F+ +  KD+ +WN +L+
Sbjct: 452 ALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLT 510

Query: 63  AQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
              +        +LF  M E  +    V++ +L+ A  R+G+  + L  + +M     V 
Sbjct: 511 GYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMK----VN 566

Query: 119 THIT 122
            HIT
Sbjct: 567 YHIT 570


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 216/662 (32%), Positives = 341/662 (51%), Gaps = 54/662 (8%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L  + +A      ++ G+  H  V+ +GL  +I++   L++ Y  C    HA  VF+ M 
Sbjct: 6   LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNME 65

Query: 183 EPNEVT-FTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            P E++ +  +M+G  K    VEALE+F +L+    +  DS +  SV   C         
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACG-------- 117

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                      R V G+ +H   IK G   D+ + +SL+ MY K    + A  +F+ +PE
Sbjct: 118 --------GLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPE 169

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           + V  WN +I+ Y Q      A+E    M+  GFEP+ VT    + +C R  D+  G E+
Sbjct: 170 KDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEI 229

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              F+ MP  +V +WN+M+S Y    + 
Sbjct: 230 HEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDI 289

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
              I+LF+ M   GVKP  TTL+ ++  C+    L  GK VH  +++     D +V S L
Sbjct: 290 ISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSL 349

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y KC + ELAE++F  IP+  +V WN MI+G        EA   F +MR++ +    
Sbjct: 350 MDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDA 409

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +F +VL++C++L++  +G+++H  I +    N+  V  AL++MY KCG +  A   F  
Sbjct: 410 ITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKC 469

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  ++ V+W  MI  Y  +G+   A+ L+ +M+ S VKPD + F+AIL+AC H+GLVD G
Sbjct: 470 LPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEG 529

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP-CKDDPVIWEVLLSSC 684
              FN M   +G+ P ++HY+C+ID LGRAG  HEA  ++ + P  +DD  +   L S+C
Sbjct: 530 CYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSAC 589

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           RLH N+ L    A  L   DP +S+ Y LL+N+Y+S  +WD++R VR  M E  + K+P 
Sbjct: 590 RLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPG 649

Query: 745 YS 746
            S
Sbjct: 650 CS 651



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/595 (27%), Positives = 272/595 (45%), Gaps = 85/595 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKL+H  ++  GL +D FLC  LI  Y  C       HL+D               A+C 
Sbjct: 22  GKLIHQKVVTLGLQNDIFLCKTLINQYLSC-------HLYDH--------------AKC- 59

Query: 67  SDDLEFAYKLFDEMPERNVVS-WNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLA 124
                    +FD M     +S WN L++   +N +  +AL ++ K+ +  ++ P   T  
Sbjct: 60  ---------VFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYP 110

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SVFKA   L     G+  H  +IK GL  +I V ++L+ +Y KC   + A+ +F EM E 
Sbjct: 111 SVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEK 170

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +   +  ++S   ++    +ALE F LM R     +SV++++ +  CAR           
Sbjct: 171 DVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCAR----------- 219

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                   N  G ++H   I  GF  D  +S++L+DMY K G ++ A  IF  +P+++VV
Sbjct: 220 ----LLDLN-RGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVV 274

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------------- 351
           +WN MI+GYG K      I+L +RM + G +P   T  ++++ C RS             
Sbjct: 275 AWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYT 334

Query: 352 ----------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                 G ++   ++F  +P   V SWN M+S Y       EA+
Sbjct: 335 IRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEAL 394

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF EM+   V+ D  T   +L++C+ +  LE GK++H   ++     +  V   L+ +Y
Sbjct: 395 GLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMY 454

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC   + A  VF  +P+ D+V W SMI     +     A   F +M Q+ + P + +F 
Sbjct: 455 AKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFL 514

Query: 510 TVLSSCAKLSSSFQGRQVHAQ-IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            +LS+C       +G     Q I   G +  +   S LI++  + G ++ A +  
Sbjct: 515 AILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEIL 569



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 233/503 (46%), Gaps = 87/503 (17%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           +V GK++H  +++ GL  D  + + L+ +Y KCN                          
Sbjct: 122 YVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNA------------------------- 156

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                  E A  LF+EMPE++V  WN +IS   ++G  + AL  +  M   GF P  +T+
Sbjct: 157 ------FEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTI 210

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +   +   LLD+  G   H  +I  G   + ++++AL+ +Y KCG  + A+ +FE+M +
Sbjct: 211 TTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPK 270

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
              V + +M+SG      ++  +++F+ M  + V     +LSS++ VC+R          
Sbjct: 271 KTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRS--------- 321

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                  +R + G+ VH  TI+   + D+ +++SL+D+Y K G ++ AE IF  +P+  V
Sbjct: 322 -------ARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKV 374

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           VSWNVMI+GY  + +  +A+ L   M+    E D +T  ++L AC +   ++ G+E+   
Sbjct: 375 VSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNL 434

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           F  +P   + SW +M+++Y    +   A
Sbjct: 435 IIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGA 494

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT---ASHIDNYVASGL 445
           ++LF EM    VKPDR     ILS+C   G+++ G       +        +++Y  S L
Sbjct: 495 LELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHY--SCL 552

Query: 446 IGIYSKCQRNELAERVFHRIPEL 468
           I +  +  R   A  +  + PE+
Sbjct: 553 IDLLGRAGRLHEAYEILQQNPEI 575



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 203/425 (47%), Gaps = 54/425 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  ++ +G   D+F+ + L+++Y KC +                            
Sbjct: 226 GMEIHEELINSGFLLDSFISSALVDMYGKCGH---------------------------- 257

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              LE A ++F++MP++ VV+WN++IS     G     + ++ +M NEG  PT  TL+S+
Sbjct: 258 ---LEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSL 314

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               +    +  G+  HG  I+  +  +++V ++L+ LY KCG  + A  +F+ + +   
Sbjct: 315 IMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKV 374

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M+SG     ++ EAL +F  M +  V  D+++ +SVL  C+              
Sbjct: 375 VSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACS-------------- 420

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             + +    G+++H L I+   + +  +  +LLDMYAK G +D A  +F  LP+R +VSW
Sbjct: 421 --QLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSW 478

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             MI  YG    +  A+EL   M     +PD V  + +L AC  +G +  G   F+ M +
Sbjct: 479 TSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMIN 538

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P V  ++ ++    ++    EA ++ +  Q   ++ D   L+ + S+C     ++
Sbjct: 539 VYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQ--QNPEIRDDVELLSTLFSACRLHRNID 596

Query: 422 SGKQV 426
            G ++
Sbjct: 597 LGAEI 601



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 146/305 (47%), Gaps = 12/305 (3%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D   L  +L +C     L+ GK +H   +      D ++   LI  Y  C   + A+ VF
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61

Query: 463 HRIPE-LDIVCWNSMIAGLSLNSLDIEAF-MFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
             +    +I  WN ++AG + N + +EA  +F K +    + P  +++ +V  +C  L  
Sbjct: 62  DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHR 121

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G+ +H  + K G + DI VGS+L+ MY KC     A   F+ M  K+   WN +I  
Sbjct: 122 YVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISC 181

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           Y Q+G   +A+  +  M   G +P+ +T    +++C+    ++ G+EI   + ++ G   
Sbjct: 182 YYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEEL-INSGF-- 238

Query: 641 ILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN----VRLAK 694
           +LD +  + ++D  G+ GH   A  + ++MP K   V W  ++S   L  +    ++L K
Sbjct: 239 LLDSFISSALVDMYGKCGHLEMAIEIFEQMP-KKTVVAWNSMISGYGLKGDIISCIQLFK 297

Query: 695 RAAEE 699
           R   E
Sbjct: 298 RMYNE 302


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/630 (33%), Positives = 341/630 (54%), Gaps = 52/630 (8%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KN    N ++S Y K G    A  +F+ M E   VT+T ++ G ++ ++  EA E+F  M
Sbjct: 81  KNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQM 140

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
            R     D V+  ++L  C     G          N+ +      QV    IKLG+++ L
Sbjct: 141 QRCGTEPDYVTFVTLLSGCNGHEMG----------NQIT------QVQTQIIKLGYDSRL 184

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            + N+L+D Y K+  +D A  +F  +PE   VS+N MI GY +     KA+ L   M++ 
Sbjct: 185 IVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNS 244

Query: 333 GFEPDEVTSINMLVACVRSGDIKTG----------------------------------- 357
           G +P E T   +L A +   DI  G                                   
Sbjct: 245 GLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDA 304

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R++FD MP     S+N ++S Y+    HK A  LFRE+QF      +   A +LS  +  
Sbjct: 305 RKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNT 364

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
              E G+Q+HA ++ T +  +  V + L+ +Y+KC + E AE +F  +     V W +MI
Sbjct: 365 LDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMI 424

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
           +         E    F +MRQ  +   Q +FA++L + A ++S   G+Q+H+ I K G++
Sbjct: 425 SAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFM 484

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           +++F GSAL+++Y KCG I  A Q F  M  +N V+WN MI  YAQNG  +  ++ +K+M
Sbjct: 485 SNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEM 544

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           + SG++PD ++F+ +L+ACSHSGLV+ G+  FNSM   + ++P  +HY  ++D L R+G 
Sbjct: 545 VLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGR 604

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYSLLAN 716
           F+EAE L+ EMP   D ++W  +L++CR+H N  LA+RAA++LF ++  +++APY  ++N
Sbjct: 605 FNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSN 664

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           IY++ G+W+++  V + M +  + K PAYS
Sbjct: 665 IYAAAGQWENVSKVHKAMRDRGVKKLPAYS 694



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 254/542 (46%), Gaps = 51/542 (9%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           + A I++ G   DT   N  +  + K      A+ LF+KMPHK+  S N ++S   KS +
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           L  A KLFD M ER  V+W  LI    +    ++A  ++ +M   G  P ++T  ++   
Sbjct: 99  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
                      +    +IK+G D  + V N L+  Y K      A  +F+EM E + V++
Sbjct: 159 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSY 218

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            AM++G +K     +A+ +F  M    +     + ++VL  CA  G     D+       
Sbjct: 219 NAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGL---DDI------- 266

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
               V GQQ+H   IK  F  ++ +SN+LLD Y+K+  +  A  +F  +PE+  VS+NV+
Sbjct: 267 ----VLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVI 322

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---------- 359
           I+GY    +   A +L + ++   F+  +     ML     + D + GR+          
Sbjct: 323 ISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTA 382

Query: 360 -------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                    +F ++   S   W AM+S+Y Q   ++E ++LF +
Sbjct: 383 DSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNK 442

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+   V  D+ T A +L + A++  L  GKQ+H+  +K+    + +  S L+ +Y+KC  
Sbjct: 443 MRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGS 502

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A + F  +P+ +IV WN+MI+  + N         FK+M  + + P   SF  VLS+
Sbjct: 503 IKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSA 562

Query: 515 CA 516
           C+
Sbjct: 563 CS 564



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 232/459 (50%), Gaps = 57/459 (12%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N ++ + CKS+ L+ A +LF EMPE + VS+N +I+   ++GL+EKA++++ +M N G  
Sbjct: 188 NTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLK 247

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           PT  T A+V  A+  L D+  G++ H  VIK     N++V+NALL  Y+K      A  +
Sbjct: 248 PTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKL 307

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+EM E + V++  ++SG A   +   A ++FR +   A        +++L + +     
Sbjct: 308 FDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIAS----- 362

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                     N     + G+Q+H  TI    ++++ + NSL+DMYAK G  + AE+IF+N
Sbjct: 363 ----------NTLDWEM-GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTN 411

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
           L  RS V W  MI+ Y QK    + ++L  +M+      D+ T  ++L A          
Sbjct: 412 LTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLG 471

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      + G IK   + F  MP  ++ SWNAM+S+Y+Q+
Sbjct: 472 KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQN 531

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID---N 439
              +  +K F+EM   G++PD  +   +LS+C+  G++E G   H  S+     +D    
Sbjct: 532 GEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLW-HFNSMTQIYKLDPRRE 590

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMI 477
           + AS ++ +  +  R   AE++   +P + D + W+S++
Sbjct: 591 HYAS-VVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 628



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 184/367 (50%), Gaps = 24/367 (6%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           +++  NA+L    K D +  A KLFDEMPE++ VS+N +IS    +G  + A  ++ ++ 
Sbjct: 284 NVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQ 343

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
              F       A++   ++  LD E GR+ H   I    D  I V N+L+ +YAKCG  +
Sbjct: 344 FTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFE 403

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +F  ++  + V +TAM+S   +     E L++F  M + +V  D  + +S+L    
Sbjct: 404 EAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLL---- 459

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
           R    + S               G+Q+H   IK GF +++   ++LLD+YAK G +  A 
Sbjct: 460 RASASIASLSL------------GKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 507

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
             F  +P+R++VSWN MI+ Y Q  ++   ++  + M   G +PD V+ + +L AC  SG
Sbjct: 508 QTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSG 567

Query: 353 DIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
            ++ G   F+SM       P    + +++    +S    EA KL  EM    + PD    
Sbjct: 568 LVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMP---IDPDEIMW 624

Query: 408 AIILSSC 414
           + +L++C
Sbjct: 625 SSVLNAC 631



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 160/340 (47%), Gaps = 21/340 (6%)

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQV-----HAASLKTASHIDNYVASGLIGIYSKCQ 453
           G  PD +     + +    G L   +Q+     H  ++ T   I  YV SG +G      
Sbjct: 47  GFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLG------ 100

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
               A ++F  + E   V W  +I G S  +   EAF  F QM++    P   +F T+LS
Sbjct: 101 ---EARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLS 157

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
            C       Q  QV  QI K GY + + VG+ L++ YCK   +  A Q F  M   ++V+
Sbjct: 158 GCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVS 217

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV--GVEIFNS 631
           +N MI GY+++G  ++AV L+ +M  SG+KP + TF A+L  C++ GL D+  G +I + 
Sbjct: 218 YNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQQIHSF 275

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           +   + V  +      ++D   +     +A  L DEMP + D V + V++S        +
Sbjct: 276 VIKTNFVWNVFVS-NALLDFYSKHDSVIDARKLFDEMP-EQDGVSYNVIISGYAWDGKHK 333

Query: 692 LAKRAAEEL-FRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
            A     EL F    +   P++ + +I S+   W+  R +
Sbjct: 334 YAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQI 373



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 46/293 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA  +      +  + N L+++Y+KC     A+ +F  + H+    W A++SA   
Sbjct: 370 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISA--- 426

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                        V+ G  E+ L ++NKM     +    T AS+
Sbjct: 427 ----------------------------YVQKGFYEEGLQLFNKMRQASVIADQATFASL 458

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +AS ++  +  G++ H  +IK G   N++  +ALL +YAKCG  K AV  F+EM + N 
Sbjct: 459 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI 518

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ AM+S  A+       L+ F+ M+   +  DSVS   VL  C+  G  VE  ++   
Sbjct: 519 VSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGL-VEEGLW--- 574

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                        + +T     +       S++DM  ++G  + AE + + +P
Sbjct: 575 -----------HFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMP 616



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 7/131 (5%)

Query: 527 VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           + A+I K G+  D    +  +  + K G++  ARQ F+ M  KNTV+ N MI GY ++G 
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
             EA +L+  M    V+   +T+  ++   S         E+F  MQ   G EP  D+ T
Sbjct: 99  LGEARKLFDGM----VERTAVTWTILIGGYSQLNQFKEAFELFVQMQ-RCGTEP--DYVT 151

Query: 647 CMIDCLGRAGH 657
            +    G  GH
Sbjct: 152 FVTLLSGCNGH 162


>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
 gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
          Length = 833

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/721 (29%), Positives = 363/721 (50%), Gaps = 62/721 (8%)

Query: 48  KMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSV 107
           ++   D+   NA++    K +  + A  +F EM ER+++SWNN I+A   +G     L++
Sbjct: 129 QLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLAL 188

Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
              M  EG  P  +T  S   A      + +GR  H LV++ G++ ++ +  AL+++Y +
Sbjct: 189 LKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGR 248

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSS 226
           CG  + A  +F  M E N V++ AM++         EA+E+F+ M+  A V    VS  +
Sbjct: 249 CGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFIT 308

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           VL            +  A+          G+++H +  +    + + ++N+L+ MY + G
Sbjct: 309 VLNAV------TTPEALAE----------GRRIHAMIQERQLLSQIEVANALVTMYGRCG 352

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
            +  AE +FS +  R +VSWN MI+ Y Q   + + + L  RM++    PD +T +  L 
Sbjct: 353 GVGDAERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALD 412

Query: 347 ACVRSGDIKTGRE-------------------------------------------MFDS 363
           AC    D+ +GR                                            +F+S
Sbjct: 413 ACAEIRDLDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFES 472

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M +  V SWN M++ Y Q+ +   A+ +F+ M   G++ ++ T   +LS C +   L  G
Sbjct: 473 MAARDVISWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQG 532

Query: 424 KQVHAASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           + +H   +     +  D  VA+ ++ +Y KC   + A  +F      ++  WNSMI+  +
Sbjct: 533 ETIHRRVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYA 592

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
           L+    +AF   ++MR+  + P + +F T+L++C    +   G+ +HA+I   G   D  
Sbjct: 593 LHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTV 652

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           V +AL+  Y KCG++  A   F  +  ++ V+WN +I G+A NG+  EA++    M   G
Sbjct: 653 VANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDG 712

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           V+PD ITF+ IL+A SH+G +  G + F SM +DH +E  ++HY CMID LGRAG   +A
Sbjct: 713 VRPDAITFLTILSASSHAGFLRQGGDDFVSMAVDHELERGVEHYGCMIDLLGRAGRIGDA 772

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           E  +  M  +D  V W  LLS+C +H +   AKR A  +  ++P++S+ Y  L+N+Y++ 
Sbjct: 773 EYFVSAMRDEDKEVSWMTLLSACEVHGDEERAKRVAGSIVEMNPQHSSAYVALSNLYATC 832

Query: 722 G 722
           G
Sbjct: 833 G 833



 Score =  281 bits (720), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 191/724 (26%), Positives = 336/724 (46%), Gaps = 98/724 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H+ R+      F  NRL+ +Y +C++   A+ +FD+M  +D+ SW A++SA  +
Sbjct: 17  GRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAMISAYAQ 76

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +                               G + +AL ++ +M+     P  +T  ++
Sbjct: 77  T-------------------------------GHQRQALDLFTEMAGSSLDPNRVTFLAL 105

Query: 127 FKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
            +A  +   +E G++ H  V  +  L+ ++ VANA++ +Y KC     A+ VF EM E +
Sbjct: 106 LEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERD 165

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++   ++  A++      L + + M  + ++ D V+  S L  C              
Sbjct: 166 LISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIG------------ 213

Query: 246 SDNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                SR++ +G+ +H L ++ G E D+ L  +L+ MY + G ++SA  IF  +PER+VV
Sbjct: 214 -----SRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVV 268

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGF-EPDEVTSINMLVACV-------------- 349
           SWN M+A         +AIEL +RM +    EP  V+ I +L A                
Sbjct: 269 SWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIHAM 328

Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                R G +     +F +M    + SWNAM+S+Y+QS   +E 
Sbjct: 329 IQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLAREV 388

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           + LF  M+   V PDR T  + L +CA +  L+SG+ VH  S+++       VA+  + +
Sbjct: 389 VNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTVHHLSVESGFGSCISVANATMHL 448

Query: 449 YSKCQRN--------ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           YS C  +        E+   +F  +   D++ WN+MI G         A   FK+M    
Sbjct: 449 YSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFSALSIFKRMLLEG 508

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQI--EKDGYVNDIFVGSALIEMYCKCGDIYG 558
           +   Q +F ++LS C   +   QG  +H ++  +     +D  V +A++ MY KCG++  
Sbjct: 509 IRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVAAAIVNMYGKCGELDT 568

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           AR  F+    +N  +WN MI  YA +G  ++A  L + M   GV PD +TF+ +L AC  
Sbjct: 569 ARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVA 628

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
            G V  G ++ ++  +D G+E        +++   + G+   A  L   +  + D V W 
Sbjct: 629 GGAVRHG-KMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYR-DVVSWN 686

Query: 679 VLLS 682
            +++
Sbjct: 687 GIIA 690



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 165/617 (26%), Positives = 294/617 (47%), Gaps = 71/617 (11%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           +E GRR HG V +   D++++  N L+++Y +C     A  VF+ M E + V++TAM+S 
Sbjct: 14  LEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAMISA 73

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
            A+T    +AL++F  M   ++  + V+  ++L  C       +S  F +          
Sbjct: 74  YAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEAC-------DSPEFLED--------- 117

Query: 256 GQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           G+Q+H     L   E+D+ ++N+++ MY K    D A  +FS + ER ++SWN  IA   
Sbjct: 118 GKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANA 177

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------------------- 349
           +    T  + LL+ M+  G  PD+VT ++ L AC+                         
Sbjct: 178 ESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVV 237

Query: 350 ----------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM-QFR 398
                     R G +++ RE+F  MP  +V SWNAM++S + + +  EAI+LF+ M    
Sbjct: 238 LGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVA 297

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHA--ASLKTASHIDNYVASGLIGIYSKCQRNE 456
            V+P R +   +L++      L  G+++HA     +  S I+  VA+ L+ +Y +C    
Sbjct: 298 MVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIE--VANALVTMYGRCGGVG 355

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            AERVF  +   D+V WN+MI+  + + L  E    F +MR   + P + +F   L +CA
Sbjct: 356 DAERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACA 415

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ--------FFDMMHG 568
           ++     GR VH    + G+ + I V +A + +Y  C     +           F+ M  
Sbjct: 416 EIRDLDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAA 475

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           ++ ++WN MI GY Q G    A+ ++K M+  G++ + +TF+++L+ C     +  G  I
Sbjct: 476 RDVISWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETI 535

Query: 629 FNSM---QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
              +     +   +PI+     +++  G+ G    A  L ++   + +   W  ++S+  
Sbjct: 536 HRRVINQTPELSSDPIV--AAAIVNMYGKCGELDTARHLFEDTSHR-NLASWNSMISAYA 592

Query: 686 LHANVRLAKRAAEELFR 702
           LH     A   +E + R
Sbjct: 593 LHGRAEQAFDLSERMRR 609



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 161/639 (25%), Positives = 283/639 (44%), Gaps = 93/639 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+HA +L  G+  D  L   L+ +Y +C    SA+ +F +MP +++ SWNA++++   
Sbjct: 220 GRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTL 279

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +     A +LF  M    +V                               PT ++  +V
Sbjct: 280 NAHFAEAIELFKRMVAVAMVE------------------------------PTRVSFITV 309

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A T    +  GRR H ++ +  L   I VANAL+++Y +CG    A  VF  M   + 
Sbjct: 310 LNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDL 369

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ AM+S  A++    E + +F  M  + V  D ++    L  CA E   ++S      
Sbjct: 370 VSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACA-EIRDLDS------ 422

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD--------MDSAEVIFSNL 298
                    G+ VH L+++ GF + + ++N+ + +Y+            M+    IF ++
Sbjct: 423 ---------GRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESM 473

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------- 348
             R V+SWN MI GY Q   S  A+ + +RM   G   ++VT +++L  C          
Sbjct: 474 AARDVISWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGE 533

Query: 349 ---------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                                       + G++ T R +F+     +++SWN+M+S+Y+ 
Sbjct: 534 TIHRRVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYAL 593

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
               ++A  L   M+  GV PDR T   +L++C A G +  GK +HA  + +    D  V
Sbjct: 594 HGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVV 653

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
           A+ L+  YSKC   + A  +F  +   D+V WN +IAG + N    EA      M+Q+ +
Sbjct: 654 ANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGV 713

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGAR 560
            P   +F T+LS+ +      QG      +  D  +   +     +I++  + G I  A 
Sbjct: 714 RPDAITFLTILSASSHAGFLRQGGDDFVSMAVDHELERGVEHYGCMIDLLGRAGRIGDAE 773

Query: 561 QFFDMMHGKNT-VTWNEMIHGYAQNGYGDEAVRLYKDMI 598
            F   M  ++  V+W  ++     +G  + A R+   ++
Sbjct: 774 YFVSAMRDEDKEVSWMTLLSACEVHGDEERAKRVAGSIV 812



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 187/371 (50%), Gaps = 10/371 (2%)

Query: 342 INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           +NM   C     +   R++FD M    V SW AM+S+Y+Q+ + ++A+ LF EM    + 
Sbjct: 40  VNMYRRC---SSLDEARKVFDRMRERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLD 96

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHA-ASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           P+R T   +L +C +   LE GKQ+HA  S       D  VA+ ++G+Y KC+R +LA  
Sbjct: 97  PNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMA 156

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           VF  + E D++ WN+ IA  + +          K M+   M P + +F + L++C    S
Sbjct: 157 VFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRS 216

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              GR +HA + + G   D+ +G+AL+ MY +CG +  AR+ F  M  +N V+WN M+  
Sbjct: 217 LSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVAS 276

Query: 581 YAQNGYGDEAVRLYKDMIASG-VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
              N +  EA+ L+K M+A   V+P  ++F+ +L A +    +  G  I   +Q    + 
Sbjct: 277 CTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLS 336

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
            I +    ++   GR G   +AE +   M  + D V W  ++S+   +A   LA+     
Sbjct: 337 QI-EVANALVTMYGRCGGVGDAERVFSAME-RRDLVSWNAMISA---YAQSGLAREVVNL 391

Query: 700 LFRLDPKNSAP 710
             R+  +   P
Sbjct: 392 FHRMRAERVPP 402



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 141/597 (23%), Positives = 248/597 (41%), Gaps = 124/597 (20%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   G+ +HA I    L     + N L+ +Y +C     A+ +F  M  +D+ SWNA++
Sbjct: 317 EALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMI 376

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           SA  +S                               GL  + ++++++M  E   P  I
Sbjct: 377 SAYAQS-------------------------------GLAREVVNLFHRMRAERVPPDRI 405

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH-------- 173
           T      A   + D++ GR  H L ++ G    I VANA + LY+ C  +          
Sbjct: 406 TFLMALDACAEIRDLDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEV 465

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
              +FE M+  + +++  M++G  +      AL +F+ M+ + +  + V+  S+L VC  
Sbjct: 466 VAGIFESMAARDVISWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVC-- 523

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
                +S  F +      R V  Q            +D  ++ ++++MY K G++D+A  
Sbjct: 524 -----DSRAFLRQGETIHRRVINQTPE-------LSSDPIVAAAIVNMYGKCGELDTARH 571

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +F +   R++ SWN MI+ Y    ++ +A +L +RM+  G  PD VT I +L ACV  G 
Sbjct: 572 LFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGA 631

Query: 354 IKTGR-----------------------------------EMFDSMPSPSVSSWNAMLSS 378
           ++ G+                                    +F ++    V SWN +++ 
Sbjct: 632 VRHGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIAG 691

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           ++ + + +EA+K    MQ  GV+PD  T   ILS+ +  G L  G              D
Sbjct: 692 FAHNGHAREALKSMWLMQQDGVRPDAITFLTILSASSHAGFLRQGG-------------D 738

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
           ++V        S    +EL   V H    +D++     I          +A  F   MR 
Sbjct: 739 DFV--------SMAVDHELERGVEHYGCMIDLLGRAGRIG---------DAEYFVSAMRD 781

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI-EKDGYVNDIFVGSALIEMYCKCG 554
            +    + S+ T+LS+C       + ++V   I E +   +  +V  AL  +Y  CG
Sbjct: 782 ED---KEVSWMTLLSACEVHGDEERAKRVAGSIVEMNPQHSSAYV--ALSNLYATCG 833



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 142/283 (50%), Gaps = 3/283 (1%)

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           A ++ +C   G LE G++VH    + A     +  + L+ +Y +C   + A +VF R+ E
Sbjct: 2   ARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRE 61

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            D+V W +MI+  +      +A   F +M  + + P + +F  +L +C        G+Q+
Sbjct: 62  RDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQI 121

Query: 528 HAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           HA++     + +D+ V +A++ MY KC     A   F  M  ++ ++WN  I   A++G 
Sbjct: 122 HARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGD 181

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
               + L K M   G+ PD +TFV+ L AC  S  +  G  + +++ L+ G+E  +   T
Sbjct: 182 YTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNG-RLIHALVLERGMEGDVVLGT 240

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
            ++   GR G    A  +   MP + + V W  +++SC L+A+
Sbjct: 241 ALVTMYGRCGCLESAREIFHRMP-ERNVVSWNAMVASCTLNAH 282



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 70/121 (57%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +A ++ +C    +  QGR+VH  +++      +F G+ L+ MY +C  +  AR+ FD M 
Sbjct: 1   YARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMR 60

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ V+W  MI  YAQ G+  +A+ L+ +M  S + P+ +TF+A+L AC     ++ G +
Sbjct: 61  ERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQ 120

Query: 628 I 628
           I
Sbjct: 121 I 121


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 225/702 (32%), Positives = 365/702 (51%), Gaps = 74/702 (10%)

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
           ++A  + + +     V WN LI   ++ G  + A++V  +M   G  P H TL  V KA 
Sbjct: 113 DYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKAC 172

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE---PNEV 187
             L     G   HGL+   G + N+++ NAL+++Y++CG  + A  +F+E+++    + +
Sbjct: 173 GELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVI 232

Query: 188 TFTAMMSGLAKTDRVVEALEMFR---LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           ++ +++S   K+     AL++F    L++ +  + +   + S++ +     CG    V  
Sbjct: 233 SWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL--PACGSLKAV-- 288

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 ++ VHG       I+ G   D+ + N+L+D YAK G M++A  +F+ +  + VV
Sbjct: 289 ----PQTKEVHGN-----AIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 339

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SWN M+AGY Q      A EL + M+      D VT                        
Sbjct: 340 SWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVT------------------------ 375

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
                  W A+++ YSQ     EA+ LFR+M F G  P+  T+  +LS+CA++G    G 
Sbjct: 376 -------WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGT 428

Query: 425 QVHAASLKTAS-HIDN---------YVASGLIGIYSKCQRNELAERVFHRIP--ELDIVC 472
           ++HA SLK     +DN          V + LI +YSKC+  + A  +F  IP  E ++V 
Sbjct: 429 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 488

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNE--MYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           W  MI G +      +A   F +M      + P  ++ + +L +CA L++   G+Q+HA 
Sbjct: 489 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 548

Query: 531 I------EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           +      E   Y    FV + LI+MY KCGD+  AR  FD M  K+ ++W  M+ GY  +
Sbjct: 549 VLRHHRYESSAY----FVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMH 604

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G G EA+ ++  M  +G  PDDITF+ +L ACSH G+VD G+  F+SM  D+G+ P  +H
Sbjct: 605 GRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEH 664

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y C ID L R+G   +A   + +MP +   V+W  LLS+CR+H+NV LA+ A  +L  ++
Sbjct: 665 YACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMN 724

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +N   Y+L++NIY++ GRW D+  +R LM ++ I K P  S
Sbjct: 725 AENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 766



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 248/488 (50%), Gaps = 47/488 (9%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA    K +H + +RNG F D F+ N LI+ Y+KC    +A  +F+ M  KD+ SWNA++
Sbjct: 286 KAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 345

Query: 62  SAQCKSDDLEFAYKLFDEMPERN----VVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +   +S + E A++LF  M + N    VV+W  +I+   + G   +AL+++ +M   G +
Sbjct: 346 AGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSL 405

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKI----------GLDKNIYVANALLSLYAK 167
           P  +T+ SV  A  +L     G   H   +K           G D+++ V NAL+ +Y+K
Sbjct: 406 PNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 465

Query: 168 CGWTKHAVPVFEE--MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK--AVSIDSVS 223
           C   K A  +F++  + E N VT+T M+ G A+     +AL++F  MI +   V+ ++ +
Sbjct: 466 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 525

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLH-LSNSLLDM 281
           +S +L  CA                  +    G+Q+H   ++   +E+  + ++N L+DM
Sbjct: 526 ISCILMACAH----------------LAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDM 569

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           Y+K GD+D+A  +F ++ ++S +SW  M+ GYG   + ++A+++  +M+  GF PD++T 
Sbjct: 570 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 629

Query: 342 INMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           + +L AC   G +  G   FDSM      +P    +   +   ++S    +A +  ++M 
Sbjct: 630 LVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMP 689

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG-IYSKCQRN 455
              ++P       +LS+C     +E  +  HA +     + +N  +  LI  IY+   R 
Sbjct: 690 ---MEPTAVVWVALLSACRVHSNVELAE--HALNKLVEMNAENDGSYTLISNIYATAGRW 744

Query: 456 ELAERVFH 463
           +   R+ H
Sbjct: 745 KDVARIRH 752



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 253/558 (45%), Gaps = 110/558 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK---DIYSWNAILSA 63
           G   H  I  NG   + F+CN L+ +YS+C +   A  +FD++  +   D+ SWN+I+SA
Sbjct: 181 GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSA 240

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             KS +   A  LF +M                        L V+ K +NE      I++
Sbjct: 241 HVKSSNAWTALDLFSKM-----------------------TLIVHEKPTNER--SDIISI 275

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            ++  A  +L  V   +  HG  I+ G   +++V NAL+  YAKCG  ++AV VF  M  
Sbjct: 276 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 335

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DV 242
            + V++ AM++G +++     A E+F+ M ++ + +D V+ ++V+   ++ GC  E+ ++
Sbjct: 336 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 395

Query: 243 FAQ---------------------SDNKFSRNVHGQQVHCLTIK----------LGFEAD 271
           F Q                     S   FS+   G ++H  ++K           G + D
Sbjct: 396 FRQMIFSGSLPNCVTIISVLSACASLGAFSQ---GTEIHAYSLKNCLLTLDNDFGGEDED 452

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           L + N+L+DMY+K     +A  IF ++P  ER+VV+W VMI G+ Q   S  A++L   M
Sbjct: 453 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 512

Query: 330 KS--CGFEPDEVTSINMLVACV-------------------------------------R 350
            S   G  P+  T   +L+AC                                      +
Sbjct: 513 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSK 572

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
            GD+ T R +FDSM   S  SW +M++ Y       EA+ +F +M+  G  PD  T  ++
Sbjct: 573 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 632

Query: 411 LSSCAAMGILESGKQVH---AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP- 466
           L +C+  G+++ G       +A        ++Y  +  I + ++  R + A R    +P 
Sbjct: 633 LYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACA--IDLLARSGRLDKAWRTVKDMPM 690

Query: 467 ELDIVCWNSMIAGLSLNS 484
           E   V W ++++   ++S
Sbjct: 691 EPTAVVWVALLSACRVHS 708



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 135/538 (25%), Positives = 223/538 (41%), Gaps = 101/538 (18%)

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F +   L   ++  Y   G  D A ++   +     V WN++I  + ++ +   AI +  
Sbjct: 92  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 151

Query: 328 RMKSCGFEPDEVTSINMLVAC-----------------------------------VRSG 352
           RM   G  PD  T  ++L AC                                    R G
Sbjct: 152 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 211

Query: 353 DIKTGREMFDSMPSPSVS---SWNAMLSSYSQSENHKEAIKLFREMQF------RGVKPD 403
            ++    +FD +    +    SWN+++S++ +S N   A+ LF +M           + D
Sbjct: 212 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 271

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             ++  IL +C ++  +   K+VH  +++  +  D +V + LI  Y+KC   E A +VF+
Sbjct: 272 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 331

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM---------------------- 501
            +   D+V WN+M+AG S +     AF  FK MR+  +                      
Sbjct: 332 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 391

Query: 502 -------------YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD----------GYVN 538
                         P   +  +VLS+CA L +  QG ++HA   K+          G   
Sbjct: 392 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 451

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFD--MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
           D+ V +ALI+MY KC     AR  FD   +  +N VTW  MI G+AQ G  ++A++L+ +
Sbjct: 452 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 511

Query: 597 MIAS--GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT-CMIDCLG 653
           MI+   GV P+  T   IL AC+H   + +G +I   +   H  E        C+ID   
Sbjct: 512 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 571

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           + G    A  + D M  K   + W  +++   +H       R +E L   D    A +
Sbjct: 572 KCGDVDTARHVFDSMSQK-SAISWTSMMTGYGMHG------RGSEALDIFDKMRKAGF 622



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 28/206 (13%)

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG--------------------YVND 539
           ++YP+ F  A++L  C    S+    Q+H QI   G                    +++ 
Sbjct: 41  DVYPSHF--ASLLKEC---KSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISP 95

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
             +G+ ++  Y  CG    A    + +     V WN +I  + + G  D A+ +   M+ 
Sbjct: 96  RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 155

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
           +G +PD  T   +L AC        G   F+ +   +G E  +     ++    R G   
Sbjct: 156 AGTRPDHFTLPHVLKACGELPSYRCG-SAFHGLICCNGFESNVFICNALVAMYSRCGSLE 214

Query: 660 EAEMLIDEMPCK--DDPVIWEVLLSS 683
           EA M+ DE+  +  DD + W  ++S+
Sbjct: 215 EASMIFDEITQRGIDDVISWNSIVSA 240


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/576 (35%), Positives = 317/576 (55%), Gaps = 53/576 (9%)

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +A+ +FE + EPN + +  M  G A     V AL+++  MI   +  +S S   +L  CA
Sbjct: 17  YAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCA 76

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
           +    +E                GQQ+H   +KLG++ D++++ SL+ MYA+NG ++ A 
Sbjct: 77  KSKALIE----------------GQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAH 120

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F     R VVS+  +I GY  +                                   G
Sbjct: 121 KVFDRSSHRHVVSYTALITGYASR-----------------------------------G 145

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            I   R++FD +    V SWNAM+S Y ++ N KEA++L+++M    VKPD +T+  ++S
Sbjct: 146 YINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVS 205

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +CA  G +E G+Q+H+         +  + + LI +YSKC   E A  +F  + + D++ 
Sbjct: 206 ACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVIS 265

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           WN++I G +  +L  EA + F++M ++   P   +  +VL +CA L +   GR +H  I 
Sbjct: 266 WNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIN 325

Query: 533 K--DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           K   G  N   + ++LI+MY KCGDI  A+Q FD M  ++  +WN MI G+A +G  + A
Sbjct: 326 KRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAA 385

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
             L+  M  +G+ PDDITFV +L+ACSHSG++D+G  IF SM  D+ + P L+HY CMID
Sbjct: 386 FDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMID 445

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            LG  G F EA+ +I  MP + D VIW  LL +C++H NV L +  A+ L +++P+N   
Sbjct: 446 LLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGS 505

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y LL+NIY++ GRWD +  +R L+++  I K P  S
Sbjct: 506 YVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCS 541



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 215/430 (50%), Gaps = 26/430 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA + G+ +H H+L+ G   D ++   LI +Y++      A  +FD+  H+ + S+ A++
Sbjct: 79  KALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALI 138

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +       +  A KLFDE+  ++VVSWN +IS  V     ++AL +Y  M      P   
Sbjct: 139 TGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDES 198

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ +V  A      +E GR+ H  +   G   NI + N L+ LY+KCG  + A  +F+ +
Sbjct: 199 TMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGL 258

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           ++ + +++  ++ G    +   EAL +F+ M+R   S + V++ SVL  CA  G     D
Sbjct: 259 AKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA---ID 315

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKL--GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           +             G+ +H    K   G      L  SL+DMYAK GD+++A+ +F ++ 
Sbjct: 316 I-------------GRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSML 362

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            RS+ SWN MI G+    ++  A +L  +M+  G +PD++T + +L AC  SG +  GR 
Sbjct: 363 TRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRH 422

Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +F SM      +P +  +  M+         KEA ++ R M    ++PD      +L +C
Sbjct: 423 IFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMP---MEPDGVIWCSLLKAC 479

Query: 415 AAMGILESGK 424
                +E G+
Sbjct: 480 KMHNNVELGE 489



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 228/489 (46%), Gaps = 90/489 (18%)

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D L +A  +F+ + E N++ WN +      N     AL +Y  M + G +P   +   + 
Sbjct: 13  DGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLL 72

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC------------------- 168
           K+      +  G++ HG V+K+G D ++YV  +L+S+YA+                    
Sbjct: 73  KSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVV 132

Query: 169 ------------GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
                       G+  +A  +F+E+S  + V++ AM+SG  +T    EALE+++ M++  
Sbjct: 133 SYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTN 192

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  ++ +V+  CA+ G  +E                G+Q+H      GF +++ + N
Sbjct: 193 VKPDESTMVTVVSACAQSG-SIEL---------------GRQLHSWIEDHGFGSNIKIVN 236

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
            L+D+Y+K G++++A  +F  L ++ V+SWN +I G+       +A+ L Q M   G  P
Sbjct: 237 VLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESP 296

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           ++VT +++L AC                                      + GDI+  ++
Sbjct: 297 NDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQ 356

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +FDSM + S+SSWNAM+  ++       A  LF +M+  G+ PD  T   +LS+C+  G+
Sbjct: 357 VFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGM 416

Query: 420 LESGKQVH---AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNS 475
           L+ G+ +    +   K    +++Y    +I +   C   + A+ +   +P E D V W S
Sbjct: 417 LDLGRHIFRSMSQDYKITPKLEHY--GCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCS 474

Query: 476 MIAGLSLNS 484
           ++    +++
Sbjct: 475 LLKACKMHN 483


>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
 gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
          Length = 969

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/709 (31%), Positives = 375/709 (52%), Gaps = 61/709 (8%)

Query: 51  HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
           H DI   N  ++   K   L+ A + F  M  R+VVSW  +I A  ++G    +L ++ +
Sbjct: 247 HLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFRE 306

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M  EG  P  +T  S+     A   +E GR+ H LV++  L+ ++ VAN+LL +Y++C  
Sbjct: 307 MLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRS 366

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTD-RVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
            + +  +F+ MS  + V+++ ++   ++ D    +AL ++R M+ + V   +++LS VL 
Sbjct: 367 WEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVL- 425

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
               E CG  +++             G+ VH   I+ G E DL +  SL++MYAK G + 
Sbjct: 426 ----EACGSLAELKG-----------GKLVHAHVIESGLEGDL-VGISLVNMYAKCGTVG 469

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
            A  +F  +  RS + WN MI  Y Q+    +A+ L + M+  G  PD +T + +L ACV
Sbjct: 470 EARKVFDRINNRSRILWNSMITAY-QEKDPHEALHLFREMQPEGVSPDRITFMTVLNACV 528

Query: 350 RSGDIKTGREM-----------------------------------FDSMPSPSVSSWNA 374
            + D++ GR +                                   FDSM    V SWN 
Sbjct: 529 NAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNN 588

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+++Y Q  + + AI L   MQ  G++PD+ T   +L++C+    L  G+Q+H+   ++ 
Sbjct: 589 MIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESR 648

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRI------PELDIVCWNSMIAGLSLNSLDIE 488
              D  + +GLI +Y+ C     A  +F  I         D+  W SMI     +    +
Sbjct: 649 LENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRK 708

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIE 548
           A   ++QM   ++   + +F +VL++CA LS   QG+ +HA++ + G   D+ V ++++ 
Sbjct: 709 ALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVF 768

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           MY KCG    A   F+    K+   W  +I  YA++G+G++A+ +++ +   G++  ++T
Sbjct: 769 MYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLT 828

Query: 609 FVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           FVA+L+ACSH GL++ G E F SM  + G+EP ++H++C++D L RAGH H AE  +  M
Sbjct: 829 FVAMLSACSHVGLIEEGCEFFASMA-ELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRM 887

Query: 669 PCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
           P   + ++   LL++CR+H +V  A+R AE+L  LDP++ APY  L+NI
Sbjct: 888 PVAANTIVLTALLAACRVHGDVERARRVAEKLEALDPESEAPYVTLSNI 936



 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 198/733 (27%), Positives = 343/733 (46%), Gaps = 67/733 (9%)

Query: 16  RNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK----DIYSWNAILSAQCKSDDLE 71
           R G+  D  +   L+   +K       + + D++       DI   N  ++   K   L+
Sbjct: 3   RRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLD 62

Query: 72  FAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
            A + F  M  R+VVSW  +I A  ++G    +L ++ +M  EG  P  +T  S+     
Sbjct: 63  GAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCE 122

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC-GWTKHAVPVFEEMSEPNEVTFT 190
           A   +E GR+ H LV++  L+ ++ VAN+LL +Y++C  W    +  F  M   + V++T
Sbjct: 123 APSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWT 182

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
            M+   ++  +   ++++FR M+ +  + +SV+  S+L      GC   S +  Q     
Sbjct: 183 VMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSIL-----SGCEAPS-LLEQ----- 231

Query: 251 SRNVHGQQVHCLTIKLGFEA--DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                G+Q+H L ++   E+  D+ + N  ++MY K G +D A   F+ +  R VVSW V
Sbjct: 232 -----GRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTV 286

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--------- 359
           MI  Y Q  + + +++L + M   G  P+ VT +++L  C     ++ GR+         
Sbjct: 287 MIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESS 346

Query: 360 --------------------------MFDSMPSPSVSSWNAMLSSYSQSENH-KEAIKLF 392
                                     +FD M      SW+ ++ + S+ ++H ++A+ L+
Sbjct: 347 LESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLY 406

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           R M   GV P    L+++L +C ++  L+ GK VHA  +++    D  V   L+ +Y+KC
Sbjct: 407 RSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGD-LVGISLVNMYAKC 465

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
                A +VF RI     + WNSMI          EA   F++M+   + P + +F TVL
Sbjct: 466 GTVGEARKVFDRINNRSRILWNSMITAYQEKDPH-EALHLFREMQPEGVSPDRITFMTVL 524

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           ++C   +    GR +H +I   G+  D+ V +AL  MY KCG +  AR  FD M  ++ V
Sbjct: 525 NACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVV 584

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +WN MI  Y Q   G+ A+ L   M   G++PD  TF ++L ACS    +  G +I +S 
Sbjct: 585 SWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQI-HSW 643

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD-----DPVIWEVLLSSCRLH 687
             +  +E  +   T +I      G  + A  + D +         D  +W  ++++   H
Sbjct: 644 IAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQH 703

Query: 688 ANVRLAKRAAEEL 700
              R A    E++
Sbjct: 704 GEYRKALELYEQM 716



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 187/682 (27%), Positives = 321/682 (47%), Gaps = 68/682 (9%)

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M   G  P  + + ++  A T L  +E G+     +    L+ +I V N  +++Y KCG 
Sbjct: 1   MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              AV  F  M   + V++T M+   ++  +   +L++FR M+ +  + +SV+  S+L  
Sbjct: 61  LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSIL-- 118

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM-D 289
               GC   S +  Q          G+Q+H L ++   E+ + ++NSLL MY++     D
Sbjct: 119 ---SGCEAPS-LLEQ----------GRQIHALVVESSLESHVVVANSLLGMYSRCRSWED 164

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
           S    F+ +  R VVSW VMI  Y Q  + + +I+L + M   G  P+ VT +++L  C 
Sbjct: 165 SRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCE 224

Query: 350 RSGDIKTGREM-------------------------------------FDSMPSPSVSSW 372
               ++ GR++                                     F  M    V SW
Sbjct: 225 APSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSW 284

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
             M+ +YSQ      +++LFREM   G  P+  T   ILS C A  +LE G+Q+HA  ++
Sbjct: 285 TVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVE 344

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL-NSLDIEAFM 491
           ++      VA+ L+G+YS+C+  E +  +F R+   D V W+++I   S  +S   +A  
Sbjct: 345 SSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALP 404

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            ++ M    + P   + + VL +C  L+    G+ VHA + + G   D+ VG +L+ MY 
Sbjct: 405 LYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDL-VGISLVNMYA 463

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCG +  AR+ FD ++ ++ + WN MI  Y Q     EA+ L+++M   GV PD ITF+ 
Sbjct: 464 KCGTVGEARKVFDRINNRSRILWNSMITAY-QEKDPHEALHLFREMQPEGVSPDRITFMT 522

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +L AC ++  ++ G  I   + +D G    +   T + +   + G   EA  + D M  +
Sbjct: 523 VLNACVNAADLENGRTIHTRI-VDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFR 581

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRA-----AEELFRLDPKNSAPYSLLANIYSSLGRWDD 726
            D V W  ++++   +   R  + A     A +L  + P + A ++ L N  S   R  D
Sbjct: 582 -DVVSWNNMIAA---YVQGRDGEGAISLCWAMQLEGMRP-DKATFTSLLNACSDPNRLVD 636

Query: 727 LRAVRELMSENCIVKDPAYSLG 748
            R +   ++E+ +  D     G
Sbjct: 637 GRQIHSWIAESRLENDIVMVTG 658



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/635 (25%), Positives = 297/635 (46%), Gaps = 90/635 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA ++ + L     + N L+ +YS+C +   ++ LFD+M  +D  SW+ I+ A C 
Sbjct: 335 GRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMA-CS 393

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            +D                                  AL +Y  M +EG +P  + L+ V
Sbjct: 394 REDSHC-----------------------------RDALPLYRSMLHEGVMPKTLALSMV 424

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A  +L +++ G+  H  VI+ GL+ ++ V  +L+++YAKCG    A  VF+ ++  + 
Sbjct: 425 LEACGSLAELKGGKLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGEARKVFDRINNRSR 483

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           + + +M++   + D   EAL +FR M  + VS D ++  +VL  C            A  
Sbjct: 484 ILWNSMITAYQEKDP-HEALHLFREMQPEGVSPDRITFMTVLNACVNA---------ADL 533

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           +N       G+ +H   +  GF AD+ ++ +L +MYAK G +  A  +F ++  R VVSW
Sbjct: 534 EN-------GRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSW 586

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           N MIA Y Q      AI L   M+  G  PD+ T  ++L AC                  
Sbjct: 587 NNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAE 646

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSS------WNAMLSSYSQSENH 385
                               G +   RE+FD++ S S         W +M+++Y Q   +
Sbjct: 647 SRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEY 706

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++A++L+ +M  R V+ DR T   +L++CA +  L  G+ +HA  ++     D  VA+ +
Sbjct: 707 RKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSI 766

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y KC   + A  VF +    DI  W ++IA  + +    +A   F+++RQ+ +  + 
Sbjct: 767 VFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSN 826

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +F  +LS+C+ +    +G +  A + + G   ++   S L+++  + G ++ A +F   
Sbjct: 827 LTFVAMLSACSHVGLIEEGCEFFASMAELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSR 886

Query: 566 MH-GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           M    NT+    ++     +G  + A R+ + + A
Sbjct: 887 MPVAANTIVLTALLAACRVHGDVERARRVAEKLEA 921



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 137/301 (45%), Gaps = 53/301 (17%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFD------KMPHKDIYSWN 58
           V G+ +H+ I  + L +D  +   LI +Y+ C + ++A+ +FD      +  H+D++ W 
Sbjct: 635 VDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWT 694

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
           ++++          AY+                     ++G   KAL +Y +M +     
Sbjct: 695 SMIT----------AYE---------------------QHGEYRKALELYEQMHSRQVEA 723

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
             +T  SV  A   L D+  G+  H  V++ GL  ++ VAN+++ +Y KCG    A  VF
Sbjct: 724 DRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVF 783

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           E+    +   +TA+++  A+     +AL +FR + +  + + +++  ++L  C+  G   
Sbjct: 784 EKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIE 843

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
           E   F  S                  +LG E ++   + L+D+ A+ G + +AE   S +
Sbjct: 844 EGCEFFAS----------------MAELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRM 887

Query: 299 P 299
           P
Sbjct: 888 P 888


>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
 gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
          Length = 941

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/747 (31%), Positives = 370/747 (49%), Gaps = 76/747 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   L +GL     + N LI +Y KC+             H D             
Sbjct: 231 GKHVHRLALGSGLDFSLRMENSLISMYGKCSR------------HPD------------- 265

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A ++F  +   +V+SW+  I+A    G   +A+  +  M+ EG  P   TL SV
Sbjct: 266 -----EAREVFLRISRPSVISWSAFIAAY---GQHWEAIKTFELMNLEGVKPNATTLTSV 317

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A   +   E GRR H LV+     +N  V NA  SLYAKC     A  VF  +   + 
Sbjct: 318 LRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDA 377

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A++S  AK     +A+ + R M  +    D ++  ++L  C+      +S +  Q 
Sbjct: 378 VSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCS------QSALLKQY 431

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            N  S    G+QVH   I  G + D +L N L+ MY + G +D A   F  + +R+V SW
Sbjct: 432 GNSKSLT-DGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSW 490

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG--------- 357
            ++I+   Q  ++++ +ELL+ M   G E +++T I++L AC  +GD+  G         
Sbjct: 491 TILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRT 550

Query: 358 --------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                     R +F+ M    V SW  ++S+Y+ +    EA++L
Sbjct: 551 KGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQL 610

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           +R M+    +PD  TL  +L +CA++  L  GK +H   + +    D +V + ++  Y K
Sbjct: 611 YRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGK 670

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C+  E A +VF RI + DIVCWN+MI   + N  + +AF  + +M +N+M P   +  T+
Sbjct: 671 CEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITL 730

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK-CGDIYGARQFFDMMHGKN 570
           L SC+      +G  +H +    GY++   V +ALI MY K CG++  A+  F+ +  KN
Sbjct: 731 LDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKN 790

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+W+ ++  YA+NG  D A  L+  M   GV P+ +TF ++L ACSH+GL D G   F 
Sbjct: 791 VVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFL 850

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SMQ DH +EP  +HY CM++ L ++G   +A   +  MP + D   W  LL +C +H + 
Sbjct: 851 SMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDK 910

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANI 717
                AA++L   +P+NSA Y LL NI
Sbjct: 911 EYGALAAKQLLDAEPRNSAAYVLLYNI 937



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 188/722 (26%), Positives = 319/722 (44%), Gaps = 97/722 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA IL +GL     L N L+ +Y KC +   A++ FD+                  
Sbjct: 29  GKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAFDR------------------ 70

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        MPER+++SWN +I+   ++   ++A+ +Y     EG  P  +T AS+
Sbjct: 71  -------------MPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASL 117

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  A  D++ GR  H   +      +  V N L+S+Y+ CG    A  VFE    P+ 
Sbjct: 118 LNACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDV 177

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            T+T +++   +  ++  A   +  M ++ +  + ++  +VL  C+        +V    
Sbjct: 178 CTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCS------SLEVLET- 230

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK-NGDMDSAEVIFSNLPERSVVS 305
                    G+ VH L +  G +  L + NSL+ MY K +   D A  +F  +   SV+S
Sbjct: 231 ---------GKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVIS 281

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
           W+  IA YGQ +++ K  EL   M   G +P+  T  ++L AC   G  + GR +     
Sbjct: 282 WSAFIAAYGQHWEAIKTFEL---MNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVL 338

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         F S+P     SWNA++S+Y++    ++AI 
Sbjct: 339 AGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIF 398

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILES---------GKQVHAASLKTASHIDNYV 441
           L R+MQ  G  PD  T   IL SC+   +L+          G+QVH+  +      D Y+
Sbjct: 399 LSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYL 458

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + L+ +Y +C   + A   F  I + ++  W  +I+ L  N    E     K M     
Sbjct: 459 GNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGT 518

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
              + +F ++L +C+       G+ +H +I   G  +DI   +AL+ MY  C  +  AR 
Sbjct: 519 EANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARL 578

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F+ M  ++ V+W  +I  YA  GY  EA++LY+ M     +PD +T +++L AC+    
Sbjct: 579 VFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRA 638

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           +  G  I   + +  GVE  +   T ++   G+     +A  + D +  K D V W  ++
Sbjct: 639 LVEGKAIHERI-VASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDK-DIVCWNAMI 696

Query: 682 SS 683
            +
Sbjct: 697 GA 698



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 179/644 (27%), Positives = 301/644 (46%), Gaps = 72/644 (11%)

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M  EG     ITL +   A  AL D   G++ H  ++  GL  ++ ++N+L+ +Y KCG 
Sbjct: 1   MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            + A   F+ M E + +++ AM++  A+ +   +A++++     +    D V+ +S+L  
Sbjct: 61  VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           C           FA  D KF R +H        +   F +D  + N L+ MY+  G +D 
Sbjct: 121 C-----------FASGDLKFGRMLHEH-----FLGTSFVSDQIVCNGLISMYSDCGSLDD 164

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A  +F       V +W  +IA Y +  +   A     +M   G   +E+T + +L  C  
Sbjct: 165 ATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSS 224

Query: 351 SGDIKTG------------------------------------REMFDSMPSPSVSSWNA 374
              ++TG                                    RE+F  +  PSV SW+A
Sbjct: 225 LEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSA 284

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
            +++Y Q   H EAIK F  M   GVKP+ TTL  +L +CA +G  E G+++HA  L   
Sbjct: 285 FIAAYGQ---HWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGP 341

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              +  V +    +Y+KC R   A RVF  IP  D V WN++++  +   L  +A    +
Sbjct: 342 YTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSR 401

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLS---------SSFQGRQVHAQIEKDGYVNDIFVGSA 545
           QM+     P   +F T+L SC++ +         S   GRQVH+Q+  +G   D ++G+ 
Sbjct: 402 QMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNL 461

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           L++MY +CG +  AR  F  +H +N  +W  +I    QNG   E + L K M   G + +
Sbjct: 462 LVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEAN 521

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            ITF+++L ACS +G + +G  I   ++   G+E  +     +++         EA ++ 
Sbjct: 522 KITFISLLGACSVTGDLSLGKTIHERIR-TKGLESDIITSNALLNMYTTCESLDEARLVF 580

Query: 666 DEMPCKDDPVIWEVLLSSCRLHAN-----VRLAKRAAEELFRLD 704
           + M  + D V W +++S+   HA      ++L +R  +E  R D
Sbjct: 581 ERMVFR-DVVSWTIIISA-YAHAGYPLEALQLYRRMEQEFSRPD 622



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 162/612 (26%), Positives = 274/612 (44%), Gaps = 97/612 (15%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           AH  G+ +HA +L      +T + N    LY+KC+    A  +F  +P KD  SWNAI  
Sbjct: 326 AHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAI-- 383

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                        +SA  + GL   A+ +  +M  EGFVP  IT
Sbjct: 384 -----------------------------VSAYAKQGLFRDAIFLSRQMQVEGFVPDDIT 414

Query: 123 LASVFK--ASTALL-------DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
             ++    + +ALL        +  GR+ H  +I  GLD + Y+ N L+ +Y +CG    
Sbjct: 415 FITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDD 474

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           A   F+ + + N  ++T ++S L +     E LE+ + M  +    + ++  S+LG C+ 
Sbjct: 475 ARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSV 534

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
            G           D    + +H +    +  K G E+D+  SN+LL+MY     +D A +
Sbjct: 535 TG-----------DLSLGKTIHER----IRTK-GLESDIITSNALLNMYTTCESLDEARL 578

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----- 348
           +F  +  R VVSW ++I+ Y       +A++L +RM+     PD VT I++L AC     
Sbjct: 579 VFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRA 638

Query: 349 -----------VRSG---DIKTG----------------REMFDSMPSPSVSSWNAMLSS 378
                      V SG   D+  G                R++FD +    +  WNAM+ +
Sbjct: 639 LVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKDIVCWNAMIGA 698

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH--AASLKTASH 436
           Y+Q+   ++A  L+ EM    + P+  TL  +L SC++   +E G  +H  AA+    SH
Sbjct: 699 YAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSH 758

Query: 437 IDNYVASGLIGIYSKCQRN-ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
               V + LI +Y+KC  N E A+  F  +   ++V W+S++A  + N  +  A   F  
Sbjct: 759 TS--VVNALINMYAKCCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWT 816

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCG 554
           M Q+ + P   +F +VL +C+    + +G      ++ D ++         ++ +  K G
Sbjct: 817 MNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSG 876

Query: 555 DIYGARQFFDMM 566
            +  A  F   M
Sbjct: 877 RVKQAASFMSAM 888



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 200/458 (43%), Gaps = 83/458 (18%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+   G+ +H+ ++ NGL  DT+L N L+++Y +C +   A+  F  +  ++++SW    
Sbjct: 435 KSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTI-- 492

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                        LIS LV+NG   + L +   M  EG     I
Sbjct: 493 -----------------------------LISLLVQNGEASEGLELLKSMDLEGTEANKI 523

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  S+  A +   D+  G+  H  +   GL+ +I  +NALL++Y  C     A  VFE M
Sbjct: 524 TFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERM 583

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + V++T ++S  A     +EAL+++R M ++    D+V+L SVL  CA         
Sbjct: 584 VFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACA--------- 634

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                       V G+ +H   +  G E D+ +  +++  Y K   ++ A  +F  + ++
Sbjct: 635 -------SLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDK 687

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS---------- 351
            +V WN MI  Y Q +   KA  L   M      P++VT I +L +C  +          
Sbjct: 688 DIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMERGSSLH 747

Query: 352 --------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                     G+++  +  F+S+ S +V SW++++++Y+++   
Sbjct: 748 REAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEE 807

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
             A  LF  M   GV P+  T   +L +C+  G+ + G
Sbjct: 808 DRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEG 845


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/608 (33%), Positives = 336/608 (55%), Gaps = 51/608 (8%)

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           A  +F  M E N V++ A+++G A+     + L++F  M          +LS+VL  CA 
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
            G   E                G+ +H L ++ G E D  L  SL+DMY+K G +  A  
Sbjct: 64  TGSLRE----------------GKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALK 107

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +F+ +    VV+W+ MI G  Q+    +A EL   M+  G  P++ T  +++      GD
Sbjct: 108 VFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGD 167

Query: 354 IKTGR-----------------------------------EMFDSMPSPSVSSWNAMLSS 378
           ++ G+                                   ++F++M +P + SWNA+LS 
Sbjct: 168 LRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSG 227

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           +  S+      ++F +M   G KP+  T   +L SC+++   E GKQVHA  +K +S  D
Sbjct: 228 FYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDD 287

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
           ++V + L+ +Y+K +  E A   F R+   DI  W  +I+G +      +A  +F+QM++
Sbjct: 288 DFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQR 347

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
             + P +++ A+ LS C+ +++   GRQ+HA   K G+  DIFVGSAL+++Y KCG +  
Sbjct: 348 EGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEH 407

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A   F  +  ++ V+WN +I GY+Q+G G++A+  ++ M++ G+ PD+ TF+ +L+ACS 
Sbjct: 408 AEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSF 467

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
            GLV+ G + F+SM   +G+ P ++HY CM+D LGRAG F+E ++ I+EM      +IWE
Sbjct: 468 MGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWE 527

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC 738
            +L +C+LH NV   ++AA++LF ++P   + Y LL+NI++S GRWDD+R +R LM+   
Sbjct: 528 TVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRG 587

Query: 739 IVKDPAYS 746
           I K+P  S
Sbjct: 588 IKKEPGCS 595



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/530 (28%), Positives = 264/530 (49%), Gaps = 57/530 (10%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           +E A +LF  MPE+N VSWN L++   + G  +K L ++ KM       +  TL++V K 
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
                 +  G+  H L ++ G + + ++  +L+ +Y+KCG    A+ VF ++  P+ V +
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           +AM++GL +     EA E+F LM RK    +  +LSS++      G           D +
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMG-----------DLR 169

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
           + +++HG    C+  K GFE+D  +SN L+ MY K+  ++    +F  +    +VSWN +
Sbjct: 170 YGQSIHG----CIC-KYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNAL 224

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------- 360
           ++G+       +   +  +M   GF+P+  T I++L +C    D + G+++         
Sbjct: 225 LSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSS 284

Query: 361 --------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                     FD + +  + SW  ++S Y+Q++  ++A+K FR+
Sbjct: 285 DDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQ 344

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           MQ  G+KP+  TLA  LS C+ M  LE+G+Q+HA ++K     D +V S L+ +Y KC  
Sbjct: 345 MQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGC 404

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E AE +F  +   DIV WN++I+G S +    +A   F+ M    + P + +F  VLS+
Sbjct: 405 MEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSA 464

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           C+ +    +G++    + K      I+  +  IE Y    DI G    F+
Sbjct: 465 CSFMGLVEEGKKRFDSMSK------IYGINPSIEHYACMVDILGRAGKFN 508



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 211/454 (46%), Gaps = 82/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK+LHA  LR+G   D FL   L+++YSKC   + A  +F K+ + D+ +W+A       
Sbjct: 70  GKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA------- 122

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I+ L + G  ++A  +++ M  +G  P   TL+S+
Sbjct: 123 ------------------------MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSL 158

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              +T + D+ +G+  HG + K G + +  V+N L+ +Y K    +    VFE M+ P+ 
Sbjct: 159 VSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDL 218

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A++SG   +        +F  M+ +    +  +  SVL  C+           +  
Sbjct: 219 VSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCS-----------SLL 267

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D +F     G+QVH   IK   + D  +  +L+DMYAK   ++ A V F  L  R + SW
Sbjct: 268 DPEF-----GKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSW 322

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
            V+I+GY Q  Q+ KA++  ++M+  G +P+E T  + L  C     ++ GR++      
Sbjct: 323 TVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVK 382

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F  + S  + SWN ++S YSQ    ++A++ 
Sbjct: 383 AGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEA 442

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           FR M   G+ PD  T   +LS+C+ MG++E GK+
Sbjct: 443 FRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK 476



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 191/373 (51%), Gaps = 24/373 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N ++    KS  +E   K+F+ M   ++VSWN L+S    +    +   ++ +M  EGF 
Sbjct: 191 NPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFK 250

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T  SV ++ ++LLD E G++ H  +IK   D + +V  AL+ +YAK    + A   
Sbjct: 251 PNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVA 310

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+ +   +  ++T ++SG A+TD+  +A++ FR M R+ +  +  +L+S L  C+     
Sbjct: 311 FDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSH---- 366

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                 A  +N       G+Q+H + +K G   D+ + ++L+D+Y K G M+ AE IF  
Sbjct: 367 -----MATLEN-------GRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKG 414

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           L  R +VSWN +I+GY Q  Q  KA+E  + M S G  PDE T I +L AC   G ++ G
Sbjct: 415 LISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEG 474

Query: 358 REMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           ++ FDSM      +PS+  +  M+    ++    E      EM    + P       +L 
Sbjct: 475 KKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMN---LTPYSLIWETVLG 531

Query: 413 SCAAMGILESGKQ 425
           +C   G ++ G++
Sbjct: 532 ACKLHGNVDFGEK 544



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 178/362 (49%), Gaps = 15/362 (4%)

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           ++    +F  MP  +  SWNA+L+ Y+Q  + K+ +KLF +M+    K  + TL+ +L  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           CA  G L  GK +HA +L++   ID ++   L+ +YSKC     A +VF +I   D+V W
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           ++MI GL       EA   F  MR+    P QF+ ++++S+   +     G+ +H  I K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G+ +D  V + LI MY K   +    + F+ M   + V+WN ++ G+  +       R+
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVE-----IFNSMQLDHGVEPILDHYTCM 648
           +  M+  G KP+  TF+++L +CS     + G +     I NS   D  V       T +
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVG------TAL 294

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           +D   +A    +A +  D +  + D   W V++S    +A    A++A +   ++  +  
Sbjct: 295 VDMYAKARCLEDAGVAFDRLVNR-DIFSWTVIISG---YAQTDQAEKAVKYFRQMQREGI 350

Query: 709 AP 710
            P
Sbjct: 351 KP 352



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 32/177 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA  ++ G F D F+ + L++LY KC                            C 
Sbjct: 373 GRQLHAVAVKAGHFGDIFVGSALVDLYGKCG---------------------------C- 404

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A  +F  +  R++VSWN +IS   ++G  EKAL  +  M +EG +P   T   V
Sbjct: 405 ---MEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGV 461

Query: 127 FKASTALLDVEHGRRCHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
             A + +  VE G++    + KI G++ +I     ++ +  + G         EEM+
Sbjct: 462 LSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMN 518


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/776 (30%), Positives = 380/776 (48%), Gaps = 84/776 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H+ I++ G  +D FL N L+ LY KC     A+                       
Sbjct: 34  GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEAR----------------------- 70

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   +LFDEMP R+V SW  L+SA  + G  E+AL +++ M   G  P   TL++ 
Sbjct: 71  --------QLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTA 122

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            ++ +AL +  HG R   LV K G D N  + +AL+  Y+KCG T+ A  VFE M+  + 
Sbjct: 123 LRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDI 182

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T M+S   +     +AL+++  MI+  V+ +  +   +L   +  G           
Sbjct: 183 VSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLN--------- 233

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   +G+ VH   +    E +L L  +L+DMY K   ++ A  +     E  V  W
Sbjct: 234 --------YGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLW 285

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VR 350
             +I+G+ Q  +  +AI     M++ G  P+  T   +L AC                V 
Sbjct: 286 TAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVM 345

Query: 351 SG---DIKTGREMFD-----------------SMPSPSVSSWNAMLSSYSQSENHKEAIK 390
           +G   D+  G  + D                  + SP+V SW ++++ +S+    +E+IK
Sbjct: 346 AGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIK 405

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +F  MQ  GV+P+  TL+ IL +C  +  L   +++H   +K  +  D  V + L+  Y+
Sbjct: 406 VFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYA 465

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
                + A  V   +   D++ + S+   ++       A      M ++++    FS A+
Sbjct: 466 GLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLAS 525

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
            LS+ A +     G+Q+H    K G  + I V + L+++Y KCG I+ A + F  +   +
Sbjct: 526 FLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPD 585

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+WN +I G A NG+   A+  ++DM  +GV+PD IT + +L ACSH GLVD+G++ F 
Sbjct: 586 AVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQ 645

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM+  HG+ P LDHY C++D LGRAG   EA  +I+ MP K D +I++ LL +C+LH N+
Sbjct: 646 SMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNI 705

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            L +  A +   LDP + A Y LLAN+Y   GR +     R +M E  + K+P  S
Sbjct: 706 PLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQS 761



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 156/600 (26%), Positives = 284/600 (47%), Gaps = 53/600 (8%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           V  G   H  +IK+G  ++++++N LLSLY KC     A  +F+EM   +  ++T +MS 
Sbjct: 31  VRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSA 90

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
             K     EALE+F  M+      +  +LS+ L  C+             +  +F+   H
Sbjct: 91  YGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCS-------------ALREFN---H 134

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G +   L  K GF+++  L ++L+D Y+K G    A  +F  +    +VSW +M++ + +
Sbjct: 135 GTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVE 194

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG--------------------DIK 355
               ++A++L  RM   G  P+E T + +L A    G                     +K
Sbjct: 195 AGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLK 254

Query: 356 TG--------REMFDSMPSPSVS------SWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           T         + + D++    ++       W A++S ++QS   +EAI  F EM+  GV 
Sbjct: 255 TALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVV 314

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN-ELAER 460
           P+  T + IL++C+++  L+ GKQ+H+  +      D  V + L+ +Y KC    E A R
Sbjct: 315 PNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVR 374

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
            F  I   +++ W S+IAG S + L+ E+   F  M+   + P  F+ +T+L +C  + S
Sbjct: 375 AFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKS 434

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
             Q R++H  I K+   ND+ VG+AL++ Y   G +  A     MM  ++ +T+  +   
Sbjct: 435 LTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATR 494

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
             Q G  + A+ +   M    V+ D  +  + L+A +   +++ G ++ +   +  G+  
Sbjct: 495 INQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQL-HCYSVKSGLGS 553

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
            +     ++D  G+ G  H+A     E+  + D V W  L+     + +V  A  A E++
Sbjct: 554 WISVSNGLVDLYGKCGCIHDAHRSFLEIT-EPDAVSWNGLIFGLASNGHVSSALSAFEDM 612



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 114/221 (51%), Gaps = 1/221 (0%)

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           K + + L  I+S C +  +   G  +H+  +K     D ++++ L+ +Y KC     A +
Sbjct: 13  KIEYSLLKDIVSFCNSRSV-RDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQ 71

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           +F  +P  D+  W  +++         EA   F  M  +  YP +F+ +T L SC+ L  
Sbjct: 72  LFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALRE 131

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G +  A + K G+ ++  +GSALI+ Y KCG    A + F+ M+  + V+W  M+  
Sbjct: 132 FNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSS 191

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
           + + G   +A++LY  MI +GV P++ TFV +L A S  GL
Sbjct: 192 FVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGL 232


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/680 (32%), Positives = 351/680 (51%), Gaps = 61/680 (8%)

Query: 108 YNKMSNEGFVPTHITLASVFKASTALL-----DVEHGRRCHGLVIKIGLDKNIYVANALL 162
           ++ +S    +P+H     V+K   A+L      ++   +   LVIK GL         L+
Sbjct: 34  FHTLSERAHIPSH-----VYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLV 88

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
           SL++K G    A  VFE + +  +  +  M+ G AK   +  AL     M    V     
Sbjct: 89  SLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVY 148

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
           + + +L VC              +D K  + +HGQ      I   F A++     +++MY
Sbjct: 149 NFTYLLKVCGD-----------NADLKRGKEIHGQ-----LITNSFAANVFAMTGVVNMY 192

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           AK   +D A  +F  +PER +VSWN +IAG+ Q   + KA+EL+ RM+  G  PD +T +
Sbjct: 193 AKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLV 252

Query: 343 NMLVACV-----------------------------------RSGDIKTGREMFDSMPSP 367
            +L A                                     + G ++T R +FD M   
Sbjct: 253 TVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQK 312

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +V SWN+M+  Y Q+   ++AI +F +M   G+ P   T+   L +CA +G LE GK VH
Sbjct: 313 TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVH 372

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
               +     D  V + LI +YSKC+R ++A  +F+ +     V WN+MI G + N    
Sbjct: 373 KFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVS 432

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           EA   F +M+   M P  F+  +V+ + A+LS +   + +H  I +     +IFV +AL+
Sbjct: 433 EALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALV 492

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
           +MY KCG I+ AR+ FDM+  ++ +TWN MI GY  +G G  A+ L+  M    V+P+DI
Sbjct: 493 DMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDI 552

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           T++++++ACSHSGLVD G+  F SM+ D+G+EP +DHY  M+D LGRAG   EA   I+ 
Sbjct: 553 TYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIEN 612

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
           MP      ++  +L +C++H N+ + ++AA++LF L+P     + LLANIY+S  +W  +
Sbjct: 613 MPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKV 672

Query: 728 RAVRELMSENCIVKDPAYSL 747
             VR+ M +  + K P  S+
Sbjct: 673 AEVRKTMEKKGLKKTPGCSV 692



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/589 (23%), Positives = 269/589 (45%), Gaps = 83/589 (14%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           +++NGL+++     +L+ L+SK  + + A  +F+ +                  D L+  
Sbjct: 72  VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPI-----------------DDKLDAL 114

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
           Y              + ++    +N   E AL+   +M  +   P       + K     
Sbjct: 115 Y--------------HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDN 160

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
            D++ G+  HG +I      N++    ++++YAKC     A  +F+ M E + V++  ++
Sbjct: 161 ADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTII 220

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           +G ++     +ALE+   M  +    DS++L +VL   A  G  +               
Sbjct: 221 AGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV-------------- 266

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+ +H   I+ GF   +++S +L DMY+K G +++A +IF  + +++VVSWN M+ GY
Sbjct: 267 --GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGY 324

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--------------- 358
            Q  +  KAI + ++M   G +P  VT +  L AC   GD++ G+               
Sbjct: 325 VQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDI 384

Query: 359 --------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                               ++F+++   +  SWNAM+  Y+Q+    EA+  F EM+  
Sbjct: 385 SVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSL 444

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G+KPD  T+  ++ + A + +    K +H   +++    + +V + L+ +YSKC    +A
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            ++F  I +  ++ WN+MI G   + L   A   F +M++  + P   ++ +V+S+C+  
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS 564

Query: 519 SSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
               +G +    +++D G    +    A++++  + G I  A  F + M
Sbjct: 565 GLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENM 613



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 214/461 (46%), Gaps = 83/461 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++ N    + F    ++ +Y+KC                              
Sbjct: 166 GKEIHGQLITNSFAANVFAMTGVVNMYAKCRQI--------------------------- 198

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            DD   AYK+FD MPER++VSWN +I+   +NG  +KAL +  +M +EG  P  ITL +V
Sbjct: 199 -DD---AYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTV 254

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A+  +  +  G+  HG  I+ G  K + ++ AL  +Y+KCG  + A  +F+ M +   
Sbjct: 255 LPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTV 314

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +MM G  +     +A+ +F  M+ + +    V++   L  CA  G           
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG----------- 363

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                R   G+ VH    +L   +D+ + NSL+ MY+K   +D A  IF+NL  R+ VSW
Sbjct: 364 --DLER---GKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----------------CVR 350
           N MI GY Q  + ++A+     MKS G +PD  T ++++ A                 +R
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478

Query: 351 S-------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
           S                   G I   R++FD +    V +WNAM+  Y      + A+ L
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDL 538

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           F +M+   V+P+  T   ++S+C+  G+++ G + H  S+K
Sbjct: 539 FDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMK 578



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 201/426 (47%), Gaps = 55/426 (12%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GK +H + +R G      +   L ++YSKC +                          
Sbjct: 265 MVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS-------------------------- 298

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                +E A  +FD M ++ VVSWN+++   V+NG  EKA++V+ KM  EG  PT +T+ 
Sbjct: 299 -----VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIM 353

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
               A   L D+E G+  H  V ++ L  +I V N+L+S+Y+KC     A  +F  ++  
Sbjct: 354 EALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR 413

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
             V++ AM+ G A+  RV EAL  F  M    +  DS ++ SV+   A            
Sbjct: 414 THVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALA------------ 461

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
               + S   H + +H L I+   + ++ ++ +L+DMY+K G +  A  +F  + +R V+
Sbjct: 462 ----ELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVI 517

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           +WN MI GYG       A++L  +MK    EP+++T ++++ AC  SG +  G   F SM
Sbjct: 518 TWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSM 577

Query: 365 PS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                  PS+  + AM+    ++   KEA      M    + P  T    +L +C     
Sbjct: 578 KQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP---ISPGITVYGAMLGACKIHKN 634

Query: 420 LESGKQ 425
           +E G++
Sbjct: 635 IEVGEK 640


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 238/785 (30%), Positives = 387/785 (49%), Gaps = 83/785 (10%)

Query: 30  IELYSKCNNTHSAQHLFDKMPHKDIYSW-----NAILSAQCKSD-DLEFAYKLFDEMPER 83
           I L ++C+     + +  ++   +   W     N ++   CK+   LE A KL DE+P R
Sbjct: 87  ISLLNRCSTLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNR 146

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
            V ++  LI +  R+   ++  S +  M  EG +P    + ++ KA +A+L    G+  H
Sbjct: 147 TVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVH 206

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
           G VI+  ++ +++V NAL+  Y+ CG    +  VF  M E + V++TA++S   +     
Sbjct: 207 GFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXD 266

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCARE----------------------------- 234
           EA  +F LM    V  D +S S++L   AR                              
Sbjct: 267 EAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGII 326

Query: 235 -GCGVESDVFAQSDNKFSRNVH-------------------------GQQVHCLTIKLGF 268
            GC V++     + + FSR +                          G+ +H +  K G 
Sbjct: 327 SGC-VQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGI 385

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
             ++++  S++DMY+K G  D AE +F     ++   WN MIA Y  + +   A+ LL+ 
Sbjct: 386 VGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRS 445

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS----PSVSSWNAMLSSYSQSEN 384
           M+  G++PD +T   +L    R+G      E+   M      P+V S+N ++S + QS  
Sbjct: 446 MQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGL 505

Query: 385 HKEAIKLFREMQFRG------------VKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
             EA+K+FR MQ               ++P+  T+   L +CA + +   GK++H  +L+
Sbjct: 506 SYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLR 565

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                + +V+S L+ +Y+KC   + A +VF RI   + V WN+++AG   N    EA   
Sbjct: 566 NGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKL 625

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH---AQIEKDGYVNDIFVGSALIEM 549
           F +M    + P+  +F  +  +C  +++   GR +H   A+ + D   N I   SALI+M
Sbjct: 626 FLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIX--SALIDM 683

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y KCG I  A+  FD    K+   WN MI  ++ +G    A  ++  M   G+ PD ITF
Sbjct: 684 YAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITF 743

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           V++L+AC+  GLV+ G + FNSM++ +GV   L+HYTCM+  LG AG   EA   I +MP
Sbjct: 744 VSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMP 803

Query: 670 CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRA 729
              D  +W  LL +CR+H+N  + +RAA+ LF L+P N+  Y LL+NIY S G WD  + 
Sbjct: 804 YPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKN 863

Query: 730 VRELM 734
           +R  M
Sbjct: 864 LRSFM 868



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/598 (24%), Positives = 264/598 (44%), Gaps = 134/598 (22%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ-- 64
           GK++H  ++R  +  D F+ N LI  YS C +  S++ +F  M  +D+ SW A++SA   
Sbjct: 202 GKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYME 261

Query: 65  ---------------------------------CKSDDLEFAYKLFDEMPER----NVVS 87
                                             ++ +++ A +  +EMPER     V S
Sbjct: 262 EGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNS 321

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           WN +IS  V+NG  E AL ++++M      P  IT+AS+  A T L  +  G+  H +  
Sbjct: 322 WNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAX 381

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
           K G+  N+YV  +++ +Y+KCG   +A  VF +    N   +  M++      +V +AL 
Sbjct: 382 KHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALG 441

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           + R M +     D ++ +++L   AR G   ++                 ++    +++G
Sbjct: 442 LLRSMQKDGWKPDVITYNTILSGHARNGLKTQA----------------XELLSEMVQMG 485

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
            + +                               VVS+NV+I+G+ Q   S +A+++ +
Sbjct: 486 LKPN-------------------------------VVSFNVLISGFQQSGLSYEALKVFR 514

Query: 328 RMKSC--GFEPDEVTSINM----------LVAC----------------VRSG------- 352
            M+S   G  P+EV +++M          L AC                +R+G       
Sbjct: 515 IMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFV 574

Query: 353 ------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                       D+ +  ++F  +   +  SWNA+++ Y  ++  +EA+KLF EM   G+
Sbjct: 575 SSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGL 634

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAE 459
           +P   T  I+  +C  +  +  G+ +H  + K     + N + S LI +Y+KC     A+
Sbjct: 635 QPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAK 694

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
            VF    E D+  WN+MI+  S++ +   AF  F QM    + P   +F ++LS+CA+
Sbjct: 695 SVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACAR 752



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 212/484 (43%), Gaps = 74/484 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   GK +H    ++G+  + ++   +I++YSKC +   A+ +F K  +K+   WN ++
Sbjct: 368 KALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMI 427

Query: 62  SAQCKSDDLEFAYKLFDEMP---------------------------------------E 82
           +A      +E A  L   M                                        +
Sbjct: 428 AAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLK 487

Query: 83  RNVVSWNNLISALVRNGLEEKALSVY------------NKMSNEGFVPTHITLASVFKAS 130
            NVVS+N LIS   ++GL  +AL V+            N++ N    P  IT+     A 
Sbjct: 488 PNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPAC 547

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
             L     G+  HG  ++ G + NI+V++AL+ +YAKC     A  VF  +   N V++ 
Sbjct: 548 ADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWN 607

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           A+M+G     +  EAL++F  M+ + +   S++   +   C         D+ A    +F
Sbjct: 608 ALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACG--------DIAAI---RF 656

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
            R +HG    C   +L       + ++L+DMYAK G +  A+ +F +  E+ V  WN MI
Sbjct: 657 GRGLHGYAAKCQLDELKNA----IXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMI 712

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP----- 365
           + +     +  A  +  +M+  G  PD +T +++L AC R G ++ G + F+SM      
Sbjct: 713 SAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGV 772

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           + ++  +  M+     +    EA+   R+M +    PD    A +L +C      E G++
Sbjct: 773 AATLEHYTCMVGILGGAGLLDEALDFIRQMPY---PPDACMWATLLQACRVHSNPEIGER 829

Query: 426 VHAA 429
              A
Sbjct: 830 AAKA 833


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/702 (32%), Positives = 365/702 (51%), Gaps = 74/702 (10%)

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
           ++A  + + +     V WN LI   ++ G  + A++V  +M   G  P H TL  V KA 
Sbjct: 106 DYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKAC 165

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE---PNEV 187
             L     G   HGL+   G + N+++ NAL+++Y++CG  + A  +F+E+++    + +
Sbjct: 166 GELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVI 225

Query: 188 TFTAMMSGLAKTDRVVEALEMFR---LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           ++ +++S   K+     AL++F    L++ +  + +   + S++ +     CG    V  
Sbjct: 226 SWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL--PACGSLKAV-- 281

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 ++ VHG       I+ G   D+ + N+L+D YAK G M++A  +F+ +  + VV
Sbjct: 282 ----PQTKEVHGN-----AIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 332

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SWN M+AGY Q      A EL + M+      D VT                        
Sbjct: 333 SWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVT------------------------ 368

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
                  W A+++ YSQ     EA+ LFR+M F G  P+  T+  +LS+CA++G    G 
Sbjct: 369 -------WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGT 421

Query: 425 QVHAASLKTAS-HIDN---------YVASGLIGIYSKCQRNELAERVFHRIP--ELDIVC 472
           ++HA SLK     +DN          V + LI +YSKC+  + A  +F  IP  E ++V 
Sbjct: 422 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 481

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNE--MYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           W  MI G +      +A   F +M      + P  ++ + +L +CA L++   G+Q+HA 
Sbjct: 482 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 541

Query: 531 I------EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           +      E   Y    FV + LI+MY KCGD+  AR  FD M  K+ ++W  M+ GY  +
Sbjct: 542 VLRHHRYESSAY----FVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMH 597

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G G EA+ ++  M  +G  PDDITF+ +L ACSH G+VD G+  F+SM  D+G+ P  +H
Sbjct: 598 GRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEH 657

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y C ID L R+G   +A   + +MP +   V+W  LLS+CR+H+NV LA+ A  +L  ++
Sbjct: 658 YACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMN 717

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +N   Y+L++NIY++ GRW D+  +R LM ++ I K P  S
Sbjct: 718 AENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 759



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 248/488 (50%), Gaps = 47/488 (9%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA    K +H + +RNG F D F+ N LI+ Y+KC    +A  +F+ M  KD+ SWNA++
Sbjct: 279 KAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 338

Query: 62  SAQCKSDDLEFAYKLFDEMPERN----VVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +   +S + E A++LF  M + N    VV+W  +I+   + G   +AL+++ +M   G +
Sbjct: 339 AGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSL 398

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKI----------GLDKNIYVANALLSLYAK 167
           P  +T+ SV  A  +L     G   H   +K           G D+++ V NAL+ +Y+K
Sbjct: 399 PNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 458

Query: 168 CGWTKHAVPVFEE--MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK--AVSIDSVS 223
           C   K A  +F++  + E N VT+T M+ G A+     +AL++F  MI +   V+ ++ +
Sbjct: 459 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 518

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL-GFEADLH-LSNSLLDM 281
           +S +L  CA                  +    G+Q+H   ++   +E+  + ++N L+DM
Sbjct: 519 ISCILMACAH----------------LAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDM 562

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           Y+K GD+D+A  +F ++ ++S +SW  M+ GYG   + ++A+++  +M+  GF PD++T 
Sbjct: 563 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 622

Query: 342 INMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           + +L AC   G +  G   FDSM      +P    +   +   ++S    +A +  ++M 
Sbjct: 623 LVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMP 682

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG-IYSKCQRN 455
              ++P       +LS+C     +E  +  HA +     + +N  +  LI  IY+   R 
Sbjct: 683 ---MEPTAVVWVALLSACRVHSNVELAE--HALNKLVEMNAENDGSYTLISNIYATAGRW 737

Query: 456 ELAERVFH 463
           +   R+ H
Sbjct: 738 KDVARIRH 745



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 253/558 (45%), Gaps = 110/558 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK---DIYSWNAILSA 63
           G   H  I  NG   + F+CN L+ +YS+C +   A  +FD++  +   D+ SWN+I+SA
Sbjct: 174 GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSA 233

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             KS +   A  LF +M                        L V+ K +NE      I++
Sbjct: 234 HVKSSNAWTALDLFSKM-----------------------TLIVHEKPTNER--SDIISI 268

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            ++  A  +L  V   +  HG  I+ G   +++V NAL+  YAKCG  ++AV VF  M  
Sbjct: 269 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 328

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DV 242
            + V++ AM++G +++     A E+F+ M ++ + +D V+ ++V+   ++ GC  E+ ++
Sbjct: 329 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 388

Query: 243 FAQ---------------------SDNKFSRNVHGQQVHCLTIK----------LGFEAD 271
           F Q                     S   FS+   G ++H  ++K           G + D
Sbjct: 389 FRQMIFSGSLPNCVTIISVLSACASLGAFSQ---GTEIHAYSLKNCLLTLDNDFGGEDED 445

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           L + N+L+DMY+K     +A  IF ++P  ER+VV+W VMI G+ Q   S  A++L   M
Sbjct: 446 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 505

Query: 330 KS--CGFEPDEVTSINMLVACV-------------------------------------R 350
            S   G  P+  T   +L+AC                                      +
Sbjct: 506 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSK 565

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
            GD+ T R +FDSM   S  SW +M++ Y       EA+ +F +M+  G  PD  T  ++
Sbjct: 566 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 625

Query: 411 LSSCAAMGILESGKQVH---AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP- 466
           L +C+  G+++ G       +A        ++Y  +  I + ++  R + A R    +P 
Sbjct: 626 LYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACA--IDLLARSGRLDKAWRTVKDMPM 683

Query: 467 ELDIVCWNSMIAGLSLNS 484
           E   V W ++++   ++S
Sbjct: 684 EPTAVVWVALLSACRVHS 701



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 135/538 (25%), Positives = 223/538 (41%), Gaps = 101/538 (18%)

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F +   L   ++  Y   G  D A ++   +     V WN++I  + ++ +   AI +  
Sbjct: 85  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 144

Query: 328 RMKSCGFEPDEVTSINMLVAC-----------------------------------VRSG 352
           RM   G  PD  T  ++L AC                                    R G
Sbjct: 145 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 204

Query: 353 DIKTGREMFDSMPSPSVS---SWNAMLSSYSQSENHKEAIKLFREMQF------RGVKPD 403
            ++    +FD +    +    SWN+++S++ +S N   A+ LF +M           + D
Sbjct: 205 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 264

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             ++  IL +C ++  +   K+VH  +++  +  D +V + LI  Y+KC   E A +VF+
Sbjct: 265 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 324

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM---------------------- 501
            +   D+V WN+M+AG S +     AF  FK MR+  +                      
Sbjct: 325 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 384

Query: 502 -------------YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD----------GYVN 538
                         P   +  +VLS+CA L +  QG ++HA   K+          G   
Sbjct: 385 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 444

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFD--MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
           D+ V +ALI+MY KC     AR  FD   +  +N VTW  MI G+AQ G  ++A++L+ +
Sbjct: 445 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 504

Query: 597 MIAS--GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT-CMIDCLG 653
           MI+   GV P+  T   IL AC+H   + +G +I   +   H  E        C+ID   
Sbjct: 505 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 564

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           + G    A  + D M  K   + W  +++   +H       R +E L   D    A +
Sbjct: 565 KCGDVDTARHVFDSMSQK-SAISWTSMMTGYGMHG------RGSEALDIFDKMRKAGF 615



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 28/206 (13%)

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG--------------------YVND 539
           ++YP+ F  A++L  C    S+    Q+H QI   G                    +++ 
Sbjct: 34  DVYPSHF--ASLLKEC---KSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISP 88

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
             +G+ ++  Y  CG    A    + +     V WN +I  + + G  D A+ +   M+ 
Sbjct: 89  RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 148

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
           +G +PD  T   +L AC        G   F+ +   +G E  +     ++    R G   
Sbjct: 149 AGTRPDHFTLPHVLKACGELPSYRCG-SAFHGLICCNGFESNVFICNALVAMYSRCGSLE 207

Query: 660 EAEMLIDEMPCK--DDPVIWEVLLSS 683
           EA M+ DE+  +  DD + W  ++S+
Sbjct: 208 EASMIFDEITQRGIDDVISWNSIVSA 233


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 201/595 (33%), Positives = 332/595 (55%), Gaps = 54/595 (9%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
           N++  N +LS+Y+K G       +F  M   + V++   +SG A      +A+ +++LM+
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129

Query: 214 R-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
           +  A++++ ++ S++L +C++  C               R ++GQ      +K GF +D+
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRC-----------VDLGRQINGQ-----ILKFGFGSDV 173

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            + + L+DMY K G +  A+  F  +PER+VV  N MI G                    
Sbjct: 174 FVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGL------------------- 214

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                           +R G I+  + +F  +      SW  M++   Q+   +EA+ +F
Sbjct: 215 ----------------MRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMF 258

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN-YVASGLIGIYSK 451
           REM+  G   D+ T   +L++C ++  L  GKQ+HA  ++T  H DN +V S L+ +YSK
Sbjct: 259 REMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRT-DHKDNVFVGSALVDMYSK 317

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C+  + AE VF R+P+ +++ W +M+ G   N    EA   F +M++N + P  F+  +V
Sbjct: 318 CRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSV 377

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           +SSCA L+S  +G Q H +    G ++ I V +ALI +Y KCG    + + F  M+ ++ 
Sbjct: 378 ISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDE 437

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           V+W  ++ GYAQ G  +E + L++ M+A G+KPD +TF+ +L+ACS +GLV+ G++ F S
Sbjct: 438 VSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFES 497

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M  +HG+ PI+DH TC+ID LGRAG   EA   I+ MPC  D V W  LLSSCR+H ++ 
Sbjct: 498 MIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDME 557

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + K AA+ L  L+P+N A Y LL+++Y+S G+WD +  +R  M +  + K+P YS
Sbjct: 558 IGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYS 612



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 219/423 (51%), Gaps = 24/423 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ ++  IL+ G   D F+ + L+++Y+K    + A+  FD+MP +++   N +++   +
Sbjct: 157 GRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMR 216

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E + +LF  + ER+ +SW  +I+ L++NGLE +AL ++ +M   GF     T  SV
Sbjct: 217 CGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSV 276

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  +LL +  G++ H  VI+     N++V +AL+ +Y+KC   K A  VF+ M + N 
Sbjct: 277 LTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNV 336

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TAM+ G  +     EA+++F  M R  V  D  +L SV+  CA              
Sbjct: 337 ISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCA-------------- 382

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G Q HC  +  G  + + +SN+L+ +Y K G  +++  +F+ +  R  VSW
Sbjct: 383 --NLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSW 440

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             ++AGY Q  ++ + I L +RM + G +PD VT I +L AC R+G ++ G + F+SM  
Sbjct: 441 TALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIK 500

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P V     ++    ++   +EA      M      PD    A +LSSC   G +E
Sbjct: 501 EHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMP---CHPDVVGWATLLSSCRVHGDME 557

Query: 422 SGK 424
            GK
Sbjct: 558 IGK 560



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 243/542 (44%), Gaps = 89/542 (16%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LH  IL+     +TFL N LI  Y K  N   A H+FD +P  +++SWN ILS   K 
Sbjct: 25  KKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKL 84

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP-THITLASV 126
             L    ++F+ MP R+ VSWN  IS     G    A+ VY  M  +  +    IT +++
Sbjct: 85  GLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTM 144

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN- 185
               +    V+ GR+ +G ++K G   +++V + L+ +Y K G    A   F+EM E N 
Sbjct: 145 LILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNV 204

Query: 186 ------------------------------EVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
                                          +++T M++GL +     EAL+MFR M   
Sbjct: 205 VMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLA 264

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
             ++D  +  SVL  C          + A  +        G+Q+H   I+   + ++ + 
Sbjct: 265 GFAMDQFTFGSVLTACG--------SLLALGE--------GKQIHAYVIRTDHKDNVFVG 308

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           ++L+DMY+K   + SAE +F  +P+++V+SW  M+ GYGQ   S +A+++   M+  G E
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVE 368

Query: 336 PDEVTSINMLVACV-----------------------------------RSGDIKTGREM 360
           PD+ T  +++ +C                                    + G  +    +
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRL 428

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F  M      SW A+L+ Y+Q     E I LF  M   G+KPD  T   +LS+C+  G++
Sbjct: 429 FTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLV 488

Query: 421 ESGKQVHAASLK---TASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSM 476
           E G Q   + +K       +D+   + +I +  +  R E A    + +P   D+V W ++
Sbjct: 489 EKGLQYFESMIKEHGIMPIVDH--CTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATL 546

Query: 477 IA 478
           ++
Sbjct: 547 LS 548



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 141/338 (41%), Gaps = 67/338 (19%)

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           A +L  C         K++H   LKT    + ++++ LI  Y K      A  VF  IP+
Sbjct: 9   ASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQ 68

Query: 468 LDIVCWNSMIA-----GLSLNSLDIEAFMFFKQ--------------------------- 495
            ++  WN++++     GL      I   M F+                            
Sbjct: 69  PNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLM 128

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           ++   M   + +F+T+L  C+K      GRQ++ QI K G+ +D+FVGS L++MY K G 
Sbjct: 129 LKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGL 188

Query: 556 IYGARQFFDMMHGKNTV-------------------------------TWNEMIHGYAQN 584
           IY A+++FD M  +N V                               +W  MI G  QN
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN-SMQLDHGVEPILD 643
           G   EA+ ++++M  +G   D  TF ++LTAC     +  G +I    ++ DH     + 
Sbjct: 249 GLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVG 308

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
             + ++D   +      AE +   MP K + + W  +L
Sbjct: 309 --SALVDMYSKCRSIKSAETVFKRMPQK-NVISWTAML 343



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 47/201 (23%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +A++L  C +  +  Q +++H  I K     + F+ + LI  Y K G++  A   FD + 
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 568 GKNTVTWNEMI-------------------------------HGYAQNGYGDEAVRLYKD 596
             N  +WN ++                                GYA  G   +AVR+YK 
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127

Query: 597 MIA-SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV-------EPILDHYTCM 648
           M+  + +  + ITF  +L  CS    VD+G +I N   L  G         P++D YT  
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQI-NGQILKFGFGSDVFVGSPLVDMYT-- 184

Query: 649 IDCLGRAGHFHEAEMLIDEMP 669
                + G  ++A+   DEMP
Sbjct: 185 -----KLGLIYDAKRYFDEMP 200


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/633 (32%), Positives = 339/633 (53%), Gaps = 51/633 (8%)

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
           +G + + +V ++L+ LYA+ G  + A  +F++M   + V +  M++G  K      A+++
Sbjct: 1   MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
           F  M       +S++ +SVL +CA E                + +  G Q+H L I  GF
Sbjct: 61  FEDMRNCQTKPNSITFASVLSICASE----------------ALSEFGNQLHGLVISCGF 104

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
             D  ++N+L+ MY+K G +  A  +F+ +P+ +VV+WN MIAG+ Q     +A  L   
Sbjct: 105 HFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSE 164

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------------------------- 360
           M S G  PD +T  + L +   S  +K G+E+                            
Sbjct: 165 MISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRD 224

Query: 361 -------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
                  F    +  +    A++S Y  +  + +A+++FR +    + P+  TLA +L +
Sbjct: 225 VGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPA 284

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           CA +  L  GK++HA  LK       +V S ++ +Y+KC R +LA ++F R+PE D VCW
Sbjct: 285 CAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCW 344

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           N++I   S N    EA   F+QM +  +     S +  LS+CA L +   G+ +H+ + K
Sbjct: 345 NAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIK 404

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
             + +++F  SALI+MY KCG++  AR  FDMM  KN V+WN +I  Y  +G+ + ++ L
Sbjct: 405 GAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLAL 464

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +  M+  G++PD +TF+ IL+AC H+G VD G++ F  M  ++G+   ++HY C++D  G
Sbjct: 465 FHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFG 524

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           RAG  +EA   I  MP   D  +W  LL +CR+H NV LA+ A+  L  LDP+NS  Y L
Sbjct: 525 RAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVL 584

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L+N+++  G+W  +R +R LM +  + K P YS
Sbjct: 585 LSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYS 617



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 167/642 (26%), Positives = 271/642 (42%), Gaps = 115/642 (17%)

Query: 18  GLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLF 77
           G   D F+ + LI+LY++      A+ LFDKMP+KD   WN +L                
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVML---------------- 45

Query: 78  DEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVE 137
                          +  V+ G    A+ V+  M N    P  IT ASV     +    E
Sbjct: 46  ---------------NGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSE 90

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
            G + HGLVI  G   +  VANAL+++Y+K G    A+ +F  M + N VT+  M++G  
Sbjct: 91  FGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFV 150

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
           +   + EA  +F  MI   VS DS++ +S                F  S  + +    G+
Sbjct: 151 QNGFMDEASLLFSEMISAGVSPDSITFAS----------------FLPSVTESASLKQGK 194

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           ++H   ++ G   D+ L ++L+D+Y K  D+  A  IF       +V    +I+GY    
Sbjct: 195 EIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNG 254

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----------------- 360
            +  A+E+ + +      P+ VT  ++L AC     +  G+E+                 
Sbjct: 255 LNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGS 314

Query: 361 ------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                             F  MP      WNA++++ SQ+   +EAI LFR+M   G+  
Sbjct: 315 AIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSY 374

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  +++  LS+CA +  L  GK +H+  +K A   + +  S LI +Y KC    +A  VF
Sbjct: 375 DCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVF 434

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             + E + V WNS+IA    +     +   F +M ++ + P   +F T+LS+C       
Sbjct: 435 DMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACG------ 488

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
              QV   I+    + + +   A +E Y    D++G                        
Sbjct: 489 HAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFG------------------------ 524

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
           + G  +EA    K+M  S   PDD  +  +L AC   G V++
Sbjct: 525 RAGRLNEAFETIKNMPFS---PDDGVWGTLLGACRVHGNVEL 563


>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 827

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/816 (28%), Positives = 381/816 (46%), Gaps = 159/816 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH+H ++ G ++  F+  +L+++YS  ++   A H+FDK                  
Sbjct: 50  GKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDK------------------ 91

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT--HITLA 124
                        M  +N+ SW  ++   +  GL  K   ++ +   +G           
Sbjct: 92  -------------MTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFP 138

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-- 182
            V      L D+E GR+ HG+V+K G   N+YV NAL+ +Y KCG    A  V E M+  
Sbjct: 139 VVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQK 198

Query: 183 ---------------------------------EPNEVTFTAMMSGLAKTDRVVEALEMF 209
                                            EPN VT++A++ G +     VE++E+F
Sbjct: 199 DCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELF 258

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
             M+   V+ D+ +L+SVL  C+R        +F            G+++H   ++    
Sbjct: 259 ARMVGAGVAPDARTLASVLPACSRMKW-----LFV-----------GKELHGYIVRHELF 302

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           ++  ++N+L+ MY + GDM SA  IFS    +   S+N MI GY                
Sbjct: 303 SNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGY---------------- 346

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVS----SWNAMLSSYSQSENH 385
                              + +G++   +E+F  M    V     SWN M+S +  +   
Sbjct: 347 -------------------LENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMF 387

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            +A+ LFR++   G++PD  TL  IL+  A M  +  GK++H+ ++      +++V   L
Sbjct: 388 DDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGAL 447

Query: 446 IGIYSKCQRNELAERVFHRIPELD-----------------------------------I 470
           + +Y KC     A+  F  I E D                                   +
Sbjct: 448 VEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNV 507

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
             WNS++AGL  N     A   F +M+ + + P  ++   +L++C+KL++  +G+QVHA 
Sbjct: 508 YTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAY 567

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
             + GY +D  +G+ L++MY KCG I    Q ++ +   N V  N M+  YA +G+G+E 
Sbjct: 568 SIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEG 627

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           + +++ M+ S V+PD +TF+++L++C H+G + +G E F  M+  + + P L HYTCM+D
Sbjct: 628 IVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLME-TYNITPTLKHYTCMVD 686

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            L RAG   EA  LI  MP + D V W  LL  C +H  V L + AAE+L  L+P N+  
Sbjct: 687 LLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGN 746

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y LLAN+Y+S GRW DL   RELM++  + K P  S
Sbjct: 747 YVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCS 782



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 131/239 (54%), Gaps = 8/239 (3%)

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
           TT + IL S  ++ +   GKQ+H+ S+KT  +  N+V + L+ +YS     E A  +F +
Sbjct: 35  TTYSTILQSSNSLTL---GKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDK 91

Query: 465 IPELDIVCWNSMIAGLSLN-SLDIEAFMFFKQMRQNEMYPTQ--FSFATVLSSCAKLSSS 521
           +   ++  W +++  L LN  L  + FM F++   + +      F F  VL+ C  L   
Sbjct: 92  MTLKNLHSWTAVLR-LHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDL 150

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             GRQVH  + K G+V +++VG+ALI+MY KCG +  A++  + M  K+ V+WN +I   
Sbjct: 151 ELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITAC 210

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
             NG   EA+ L ++M+ S ++P+ +T+ A++   S +      VE+F  M +  GV P
Sbjct: 211 VANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARM-VGAGVAP 268


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/631 (32%), Positives = 341/631 (54%), Gaps = 64/631 (10%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
            +  H  +IK       ++ N L+S YAK G   +A  VF++M  PN  ++  ++S  +K
Sbjct: 28  AKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSK 87

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV------ESDVFAQSDNKFSR 252
             RV E   +F  M R+    D VS +S++   A  GCG+        ++  ++D  F+ 
Sbjct: 88  LGRVSEMEYLFDAMPRR----DGVSWNSLISGYA--GCGLIYQSVKAYNLMLKNDGSFNL 141

Query: 253 N-----------------VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
           N                   G+Q+H   +K GF + + + + L+DMY+K G +  A  +F
Sbjct: 142 NRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVF 201

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
             LPE++VV +N +I G                                    +R G ++
Sbjct: 202 DELPEKNVVMYNTLIMGL-----------------------------------MRCGRVE 226

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
             + +F  M      SW +M++ ++Q+   ++AI +FREM+   ++ D+ T   +L++C 
Sbjct: 227 DSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACG 286

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
            +  L+ GKQVHA  ++T    + +VAS L+ +Y KC+  + AE VF ++   ++V W +
Sbjct: 287 GVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTA 346

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           M+ G   N    EA   F  M++  + P  F+  +V+SSCA L+S  +G Q HA+    G
Sbjct: 347 MLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSG 406

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
            ++ I V +AL+ +Y KCG I  + + F+ +  K+ VTW  ++ GYAQ G  +E + L++
Sbjct: 407 LISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFE 466

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
            M+A G+KPD +TF+ +L+ACS +GLV+ G +IF SM  +HG+ PI DHYTCMID   RA
Sbjct: 467 SMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRA 526

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLA 715
           G   EA   I++MP   D + W  LLSSCR + N+ + K AAE L  LDP N+A Y LL+
Sbjct: 527 GRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLS 586

Query: 716 NIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++Y++ G+W+++  +R+ M +  + K+P  S
Sbjct: 587 SVYAAKGKWEEVARLRKDMRDKGLRKEPGCS 617



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 154/532 (28%), Positives = 265/532 (49%), Gaps = 66/532 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            K LH+HI++   + +TFL N LI  Y+K  +   A  +FD+MPH ++YSWN ILSA  K
Sbjct: 28  AKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSK 87

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEG-FVPTHITLA 124
              +     LFD MP R+ VSWN+LIS     GL  +++  YN M  N+G F    IT +
Sbjct: 88  LGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFS 147

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++   ++    V+ GR+ HG V+K G    ++V + L+ +Y+K G    A  VF+E+ E 
Sbjct: 148 TLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEK 207

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVF 243
           N V +  ++ GL +  RV ++  +F  M  +    DS+S +S++    + G   ++ D+F
Sbjct: 208 NVVMYNTLIMGLMRCGRVEDSKRLFFEMRER----DSISWTSMITGFTQNGLDRDAIDIF 263

Query: 244 A-------QSDNKFSRNV-----------HGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
                   Q D     +V            G+QVH   I+  ++ ++ ++++L+DMY K 
Sbjct: 264 REMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKC 323

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
            ++ SAE +F  +  ++VVSW  M+ GYGQ   S +A++    M+  G EPD+ T  +++
Sbjct: 324 KNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVI 383

Query: 346 VACV-----------------------------------RSGDIKTGREMFDSMPSPSVS 370
            +C                                    + G I+    +F+ +      
Sbjct: 384 SSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEV 443

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           +W A++S Y+Q     E I LF  M   G+KPD+ T   +LS+C+  G++E G Q+  + 
Sbjct: 444 TWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 503

Query: 431 LKTASHI---DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
           +     +   D+Y    +I ++S+  R E A    +++P   D + W ++++
Sbjct: 504 INEHGIVPIQDHYTC--MIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 223/423 (52%), Gaps = 24/423 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H+++ G     F+ + L+++YSK      A+ +FD++P K++  +N ++    +
Sbjct: 162 GRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMR 221

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E + +LF EM ER+ +SW ++I+   +NGL+  A+ ++ +M  E       T  SV
Sbjct: 222 CGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSV 281

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   ++ ++ G++ H  +I+     NI+VA+AL+ +Y KC   K A  VF++M+  N 
Sbjct: 282 LTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNV 341

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM+ G  +     EA++ F  M +  +  D  +L SV+  CA      E       
Sbjct: 342 VSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEE------- 394

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q H   +  G  + + +SN+L+ +Y K G ++ +  +F+ +  +  V+W
Sbjct: 395 ---------GAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTW 445

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             +++GY Q  ++ + I L + M + G +PD+VT I +L AC R+G ++ G ++F+SM +
Sbjct: 446 TALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMIN 505

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  M+  +S++   +EA     +M F    PD  + A +LSSC   G ++
Sbjct: 506 EHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPF---SPDAISWATLLSSCRFYGNMD 562

Query: 422 SGK 424
            GK
Sbjct: 563 IGK 565



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 107/270 (39%), Gaps = 51/270 (18%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI-YGARQF---- 562
           +  +L  C +  +  + + +H+ I K     + F+ + LI  Y K G I Y  + F    
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71

Query: 563 --------------------------FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
                                     FD M  ++ V+WN +I GYA  G   ++V+ Y  
Sbjct: 72  HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131

Query: 597 MIAS--GVKPDDITFVAILTACSHSGLVDVGVEI------FNSMQLDHGVEPILDHYTCM 648
           M+ +      + ITF  +L   S  G V +G +I      F  M       P++D Y+ M
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
                  G    A  + DE+P K + V++  L+        V  +KR     F +  ++S
Sbjct: 192 -------GMISCARKVFDELPEK-NVVMYNTLIMGLMRCGRVEDSKRL---FFEMRERDS 240

Query: 709 APYSLLANIYSSLG-RWDDLRAVRELMSEN 737
             ++ +   ++  G   D +   RE+  EN
Sbjct: 241 ISWTSMITGFTQNGLDRDAIDIFREMKLEN 270


>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
 gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
          Length = 785

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/791 (28%), Positives = 392/791 (49%), Gaps = 90/791 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA    + LH+ I+R  L +  FL N LI  Y KC++   A   F++M +K++Y+W AI+
Sbjct: 9   KALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNVYTWTAII 68

Query: 62  SA----QC----------------KSDDLEF---------------AYKLFDEMPERNVV 86
                  C                K D++                 A ++FD MP RNV+
Sbjct: 69  GVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAKRVFDAMPARNVI 128

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           +W  +I A     LE+ A  V+  M  EGF    +T  ++ +A +    +E G   H   
Sbjct: 129 TWTAMIGAHAVTSLEQ-AFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRS 187

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           ++        + NAL+++Y +CG  + A  +F  M E + + + A+++   +   V EA+
Sbjct: 188 VESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAV 247

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            +++LM+++    D V+  ++L +                 N        + VH   ++ 
Sbjct: 248 LLYQLMLQEGCKPDKVTFVALLTM----------------SNGPEALTEVKLVHSHIVES 291

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           G   ++ L  +L+ MY+K   ++    +F  +P+R+V+SWNVM+  Y +     KA+++ 
Sbjct: 292 GVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQIT 351

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--------------------------- 359
           + M+  G +PD VT + +L  C  S D+K GR+                           
Sbjct: 352 EYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRC 411

Query: 360 --------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
                   +FD +   +V SW AML++YS+      A+ LF  +   GVKP   T    L
Sbjct: 412 GEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEAL 471

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDI 470
            +C     L+ G+ VH+ ++++ + ID  + S L+ +Y +C     A+  F       + 
Sbjct: 472 DACVGAEALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNH 531

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           V W++MIA    +  D E     + M+Q  +  +  +FA+ LS+C+ L+   +G+++H+ 
Sbjct: 532 VTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSY 591

Query: 531 IEKDGYVND-IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
           + +  +  +   V ++L+ MY KCG +  AR+ F+    ++T+ WN +I GYAQ+    +
Sbjct: 592 VRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDTICWNAIISGYAQHSQTRD 651

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           AV L+  M   GV PD +TFV IL+ CSH GL+D GV  + SM ++ G+EP  D+Y C+I
Sbjct: 652 AVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEGVYAYASM-VELGLEPTQDNYACVI 710

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
           D LGRAG   EAE  I  +  +        LLSSC+ H +V+  +RAAE +  +DP++S+
Sbjct: 711 DLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSS 770

Query: 710 PYSLLANIYSS 720
            + +L++IYS+
Sbjct: 771 AHVVLSSIYSA 781



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 153/374 (40%), Gaps = 73/374 (19%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASG--LIGIYSKCQRNELAERVFHRIPE 467
           +L +C  +  L+  +++H+  ++ +  +DN V  G  LI  Y KC   + A   F R+  
Sbjct: 1   LLQACPKVKALDVARRLHSQIVRAS--LDNRVFLGNHLIHTYGKCHSLDDAWETFERMSY 58

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP---TQFSFATVLSSCAK------- 517
            ++  W ++I   + +     A +  +QM    + P   T  +  T+  SC         
Sbjct: 59  KNVYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAKRV 118

Query: 518 --------------------LSSSFQGRQVHAQIEKDGYVNDIFVGSALIE--------- 548
                               ++S  Q  +V   +E +G+ ++      L++         
Sbjct: 119 FDAMPARNVITWTAMIGAHAVTSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLE 178

Query: 549 --------------------------MYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
                                     MY +CG +  AR  F  M  ++ + WN +I  Y 
Sbjct: 179 VGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYG 238

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           Q+G+ +EAV LY+ M+  G KPD +TFVA+LT  S+       V++ +S  ++ GV   +
Sbjct: 239 QHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTM-SNGPEALTEVKLVHSHIVESGVSINI 297

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE--EL 700
              T ++    +     +   L ++MP + + + W V++++   H   R A +  E  +L
Sbjct: 298 ALGTALVAMYSKCESLEDTRWLFEKMP-QRNVISWNVMVTAYAKHGLGRKAVQITEYMQL 356

Query: 701 FRLDPKNSAPYSLL 714
             + P N     LL
Sbjct: 357 DGVKPDNVTCVGLL 370



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 16/237 (6%)

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +L +C K+ +    R++H+QI +    N +F+G+ LI  Y KC  +  A + F+ M  KN
Sbjct: 1   LLQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 60

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
             TW  +I   AQ+     A+ L + M+  GVKPD+IT +A LT     G VD    +F+
Sbjct: 61  VYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAKRVFD 120

Query: 631 SMQLDHGVEPILDHYTCMID--CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR--- 685
           +M   + +      +T MI    +       +   L++    K + V +  L+ +C    
Sbjct: 121 AMPARNVIT-----WTAMIGAHAVTSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPE 175

Query: 686 -LHANVRLAKRAAEELFRLD-PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
            L   + L  R+ E    ++ P  +A    L  +Y   GR +D RA+   M E  I+
Sbjct: 176 FLEVGIILHMRSVESSSAMETPLCNA----LITMYGRCGRLEDARAIFSSMVERDII 228


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/734 (30%), Positives = 374/734 (50%), Gaps = 79/734 (10%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+    A++   CK   +E A  +FD M +R+VV WN ++   V  G  E+A+ +  +M 
Sbjct: 94  DVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMG 153

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWT 171
            E   P   T+ ++  A     ++  GR  HG  ++ G+ D N +VA AL+  Y +  + 
Sbjct: 154 RENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLR--FD 211

Query: 172 KHAVPV-FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              +P+ F+ M   N V++ AM+SG        +ALE+F  M+   V  D V++   +  
Sbjct: 212 MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQA 271

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CA  G               S  + G+Q+H L IK  F  DL++ N+LL+MY+ NG ++S
Sbjct: 272 CAELG---------------SLKL-GKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLES 315

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-- 348
           +  +F ++P R    WN MI+ Y       +A++L  RM+S G + DE T + ML  C  
Sbjct: 316 SHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEE 375

Query: 349 ---------------VRSGD-------------------IKTGREMFDSMPSPSVSSWNA 374
                          ++SG                    +++ +++FD M    + SWN 
Sbjct: 376 LASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNT 435

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+ + +++    +A +LF  M+   +KP+  T+  IL++C  +  L+ G+ +H   +K +
Sbjct: 436 MILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHS 495

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             I+  + + L  +Y  C     A  +F   P+ D++ WN+MI     NS+ I       
Sbjct: 496 IEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIXKAEPNSVTI------- 548

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN--DIFVGSALIEMYCK 552
                           VLSS   L++  QG+ +HA + + G+    D+ + +A I MY +
Sbjct: 549 --------------INVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYAR 594

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           CG +  A   F  +  +N ++WN MI GY  NG G +A+  +  M+  G +P+ +TFV++
Sbjct: 595 CGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSV 654

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L+ACSHSG +++G+++F+SM  D  V P L HY+C++D L R G   EA   ID MP + 
Sbjct: 655 LSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEP 714

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
           D  +W  LLSSCR +++ + AK   E+L +L+P N+  Y LL+N+Y++ G W ++R +R 
Sbjct: 715 DASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRT 774

Query: 733 LMSENCIVKDPAYS 746
            + E  + K P  S
Sbjct: 775 WLKEKGLRKPPGIS 788



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 171/634 (26%), Positives = 303/634 (47%), Gaps = 79/634 (12%)

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           WN++I        ++  LS Y +M + G +P + TL  V KA  A   VE G+  H  + 
Sbjct: 28  WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 87

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
              L  ++ V  A++  Y KCG+ + A  VF+ MS+ + V + AM+ G        EA+ 
Sbjct: 88  GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 147

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           + R M R+ +  +S ++ ++L  C  EG          S+ +  R VHG   +CL   + 
Sbjct: 148 LVREMGRENLRPNSRTMVALLLAC--EGA---------SELRLGRGVHG---YCLRNGM- 192

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F+++ H++ +L+  Y +  DM    ++F  +  R++VSWN MI+GY       KA+EL  
Sbjct: 193 FDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFV 251

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGR----------------------------- 358
           +M     + D VT +  + AC   G +K G+                             
Sbjct: 252 QMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNG 311

Query: 359 ------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                 ++F+S+P+     WN+M+S+Y+    H+EA+ LF  MQ  GVK D  T+ I+LS
Sbjct: 312 SLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLS 371

Query: 413 SCA--AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
            C   A G+L+ GK +HA  +K+   ID  + + L+ +Y++    E  +++F R+  +DI
Sbjct: 372 MCEELASGLLK-GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDI 430

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           + WN+MI  L+ N+L  +A   F++MR++E+ P  ++  ++L++C  ++    GR +H  
Sbjct: 431 ISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGY 490

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + K     +  + +AL +MY  CGD   AR  F+    ++ ++WN MI            
Sbjct: 491 VMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMI------------ 538

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD--HYTCM 648
                       +P+ +T + +L++ +H   +  G +  ++     G    LD       
Sbjct: 539 ---------XKAEPNSVTIINVLSSFTHLATLPQG-QSLHAYVTRRGFSLGLDLSLANAF 588

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           I    R G    AE +   +P K + + W  +++
Sbjct: 589 ITMYARCGSLQSAENIFKTLP-KRNIISWNAMIA 621



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 194/429 (45%), Gaps = 78/429 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GK LHAH++++G+  D  L N L+ +Y++ N   S Q +FD+M   DI SWN      
Sbjct: 381 LKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWN------ 434

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +I AL RN L  +A  ++ +M      P   T+ 
Sbjct: 435 -------------------------TMILALARNTLRAQACELFERMRESEIKPNSYTII 469

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  A   +  ++ GR  HG V+K  ++ N  +  AL  +Y  CG    A  +FE   + 
Sbjct: 470 SILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDR 529

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + +++ A                    MI KA   +SV++ +VL                
Sbjct: 530 DLISWNA--------------------MIXKA-EPNSVTIINVL---------------- 552

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFE--ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
            S    +    GQ +H    + GF    DL L+N+ + MYA+ G + SAE IF  LP+R+
Sbjct: 553 SSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRN 612

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           ++SWN MIAGYG   + + A+    +M   GF P+ VT +++L AC  SG I+ G ++F 
Sbjct: 613 IISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFH 672

Query: 363 SM-----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           SM      +P +  ++ ++   ++     EA +    M    ++PD +    +LSSC A 
Sbjct: 673 SMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMP---IEPDASVWRALLSSCRAY 729

Query: 418 GILESGKQV 426
              +  K +
Sbjct: 730 SDAKQAKTI 738



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 181/394 (45%), Gaps = 37/394 (9%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D+Y  NA+L+    +  LE +++LF+ +P R+   WN++ISA    G  E+A+ ++ +M
Sbjct: 295 EDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRM 354

Query: 112 SNEGFVPTHITLASVFKASTALLD-VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
            +EG      T+  +      L   +  G+  H  VIK G+  +  + NALLS+Y +   
Sbjct: 355 QSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNC 414

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            +    +F+ M   + +++  M+  LA+     +A E+F  M    +  +S ++ S+L  
Sbjct: 415 VESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAA 474

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           C    C             F R++HG       +K   E +  L  +L DMY   GD  +
Sbjct: 475 CEDVTC-----------LDFGRSIHG-----YVMKHSIEINQPLRTALADMYMNCGDEAT 518

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD------------- 337
           A  +F   P+R ++SWN MI     +  S   I +L         P              
Sbjct: 519 ARDLFEGCPDRDLISWNAMIX--KAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGF 576

Query: 338 ----EVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
               +++  N  +    R G +++   +F ++P  ++ SWNAM++ Y  +    +A+  F
Sbjct: 577 SLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAF 636

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
            +M   G +P+  T   +LS+C+  G +E G Q+
Sbjct: 637 SQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQL 670



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 155/315 (49%), Gaps = 8/315 (2%)

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           WN+++   +  +N +  +  + +M+  GV P+ TTL ++L +CAA   +E GK +H +  
Sbjct: 28  WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 87

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
            T    D  V + ++  Y KC   E A  VF  + + D+V WN+M+ G        EA +
Sbjct: 88  GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 147

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG-YVNDIFVGSALIEMY 550
             ++M +  + P   +   +L +C   S    GR VH    ++G + ++  V +ALI  Y
Sbjct: 148 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 207

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            +  D+      FD+M  +N V+WN MI GY   G   +A+ L+  M+   VK D +T +
Sbjct: 208 LRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTML 266

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEM 668
             + AC+  G + +G +I    QL    E + D Y    +++     G    +  L + +
Sbjct: 267 VAVQACAELGSLKLGKQIH---QLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESV 323

Query: 669 PCKDDPVIWEVLLSS 683
           P +D P +W  ++S+
Sbjct: 324 PNRDAP-LWNSMISA 337


>gi|302756495|ref|XP_002961671.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
 gi|300170330|gb|EFJ36931.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
          Length = 934

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/756 (29%), Positives = 365/756 (48%), Gaps = 91/756 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKL+H  +   G  DD  +   L+ +Y KC +   A  +FD+                  
Sbjct: 226 GKLVHDTLAEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDR------------------ 267

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        MP  +V+ W+ +ISA V     E++L ++ KM  EG  P ++TL SV
Sbjct: 268 -------------MPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSV 314

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      +E G+  H  V++ G + ++ V NA++S+Y KCG  + A  VF  +   + 
Sbjct: 315 LSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRSV 374

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT   MM   A       AL++FR M+ + +  D+++  S L  C+              
Sbjct: 375 VTCNGMMGACAVQGDSSGALKLFRYMVHEGIEFDNITFLSALCACS-------------- 420

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S   HG+  H   ++ G E D+ ++N+L++MY K G +++AE +F  LPE+ V +W
Sbjct: 421 --GTSGLSHGEFFHARMLECGLELDIFVANALVNMYGKCGKVEAAEHVFEELPEQDVRTW 478

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
           N MI  Y Q  +    + + + M   G++PDEVT    L AC                  
Sbjct: 479 NAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLNACYHPRFLRDVHSLISETGI 538

Query: 350 --------------RSGDIKTGREMFDSMPSPSVSSWNAMLSS------------YSQSE 383
                         R G ++ G ++F+ +   S++SWN M++S            + QS 
Sbjct: 539 SNTVVQNALVVMYGRFGLLEEGYQVFEKLDQESITSWNVMIASCAQTCWNSVIFAHVQSG 598

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY-VA 442
              EA+K+F  MQ  GV PD+T+   ++ + + +G+ E       A +  +   D   + 
Sbjct: 599 RDSEALKMFWRMQQAGVWPDKTSFVAVVKAYSNVGMTEPEIDWLRAVIANSDVEDGVPIG 658

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + LI +Y +C     A  +F  + E D V WN+M++         ++   F+QM Q    
Sbjct: 659 NALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTP 718

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P + +  TVL+ CA L +  +G+ +   ++      +  +G+A++ MY KCG    AR+ 
Sbjct: 719 PDKVTILTVLNVCASLPALQEGKAICVWLDHTPLSANQMIGNAILNMYAKCGSRDEARRI 778

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F +M G++ V+WN +I  Y     G  A ++++ M   G  PD +TF  IL+ CSH GL+
Sbjct: 779 FSVMQGRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHGGLL 838

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
              V+ F  M+ D+ VE    HY C++D LGR G   EAE + ++MP   DP++W  LLS
Sbjct: 839 GEAVKWFRWMREDYYVEAETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDPIVWTTLLS 898

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
           +C++H   +  KRAAE L  LDP+ ++ Y +L+ IY
Sbjct: 899 ACQVHGETQRGKRAAERLVELDPEVTSAYVVLSTIY 934



 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 188/723 (26%), Positives = 333/723 (46%), Gaps = 99/723 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA I R+    D  + N LI++Y KC +   A  +F                    
Sbjct: 24  GRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDASQVF-------------------- 63

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  Y+L  E    N+V+W  LI+A  RNG  + A+ ++ +M  EG  P  ITL ++
Sbjct: 64  -------YQLL-ETSVVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTI 115

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F+A     ++E G++ H     +  + ++ + ++L+++Y KCG    A  +F+ M E N 
Sbjct: 116 FEACGNPENLEDGKKIHAY---LSCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNT 172

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + ++M    + DRV EA+E++  M++        +  +VL   +              
Sbjct: 173 VAWNSLMGAFIQHDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAIS-------------- 218

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   HG+ VH    + G E D+ +  +L++MY K G +  A  +F  +P   V+ W
Sbjct: 219 --SLESLRHGKLVHDTLAEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILW 276

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
           + +I+ +    +  +++ L ++M+  G  P+ VT +++L AC     ++TG+        
Sbjct: 277 SAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVE 336

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                      ++F  +P  SV + N M+ + +   +   A+KL
Sbjct: 337 AGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALKL 396

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           FR M   G++ D  T    L +C+    L  G+  HA  L+    +D +VA+ L+ +Y K
Sbjct: 397 FRYMVHEGIEFDNITFLSALCACSGTSGLSHGEFFHARMLECGLELDIFVANALVNMYGK 456

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C + E AE VF  +PE D+  WN+MI     N  +    + F+ M Q+   P + +FA  
Sbjct: 457 CGKVEAAEHVFEELPEQDVRTWNAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAIT 516

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L++C      F  R VH+ I + G  N + V +AL+ MY + G +    Q F+ +  ++ 
Sbjct: 517 LNAC--YHPRFL-RDVHSLISETGISNTV-VQNALVVMYGRFGLLEEGYQVFEKLDQESI 572

Query: 572 VTWNEM------------IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
            +WN M            I  + Q+G   EA++++  M  +GV PD  +FVA++ A S+ 
Sbjct: 573 TSWNVMIASCAQTCWNSVIFAHVQSGRDSEALKMFWRMQQAGVWPDKTSFVAVVKAYSNV 632

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           G+ +  ++   ++  +  VE  +     +I   GR G F +A  L D M  + D V W  
Sbjct: 633 GMTEPEIDWLRAVIANSDVEDGVPIGNALISMYGRCGSFGKARDLFDSMA-ERDAVTWNT 691

Query: 680 LLS 682
           ++S
Sbjct: 692 MMS 694



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 198/740 (26%), Positives = 342/740 (46%), Gaps = 114/740 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA++  N    D  L + LI +Y KC +                      LS  C 
Sbjct: 128 GKKIHAYLSCN---SDVVLGSSLITMYGKCGS----------------------LSEACL 162

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +F  M E N V+WN+L+ A +++   E+A+ +Y +M   GF+P+  T  +V
Sbjct: 163 ---------MFQSMEEWNTVAWNSLMGAFIQHDRVEEAMELYWEMLQCGFLPSRPTFLTV 213

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++L  + HG+  H  + + G + ++ V  AL+++Y KCG    AV VF+ M   + 
Sbjct: 214 LAAISSLESLRHGKLVHDTLAEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDV 273

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC-GVESDVFAQ 245
           + ++A++S         E+L +FR M  +    ++V+L SVL  C  EG   +E+     
Sbjct: 274 ILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSAC--EGPQALET----- 326

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+ +H   ++ G+E DL + N+++ MY K G ++ A  +F  +P RSVV+
Sbjct: 327 ----------GKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRSVVT 376

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
            N M+     +  S+ A++L + M   G E D +T ++ L AC                 
Sbjct: 377 CNGMMGACAVQGDSSGALKLFRYMVHEGIEFDNITFLSALCACSGTSGLSHGEFFHARML 436

Query: 350 -------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G ++    +F+ +P   V +WNAM+ +Y Q+E  +  + 
Sbjct: 437 ECGLELDIFVANALVNMYGKCGKVEAAEHVFEELPEQDVRTWNAMILAYVQNEEERSGLL 496

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIY 449
           +FR M   G KPD  T AI L++C     L   + VH  SL + + I N V  + L+ +Y
Sbjct: 497 VFRHMMQSGYKPDEVTFAITLNACYHPRFL---RDVH--SLISETGISNTVVQNALVVMY 551

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLS---LNSL---------DIEAFMFFKQMR 497
            +    E   +VF ++ +  I  WN MIA  +    NS+         D EA   F +M+
Sbjct: 552 GRFGLLEEGYQVFEKLDQESITSWNVMIASCAQTCWNSVIFAHVQSGRDSEALKMFWRMQ 611

Query: 498 QNEMYPTQFSFATVLSSCAKLS-SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           Q  ++P + SF  V+ + + +  +  +   + A I      + + +G+ALI MY +CG  
Sbjct: 612 QAGVWPDKTSFVAVVKAYSNVGMTEPEIDWLRAVIANSDVEDGVPIGNALISMYGRCGSF 671

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             AR  FD M  ++ VTWN M+    Q  +G ++++L++ M+  G  PD +T + +L  C
Sbjct: 672 GKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNVC 731

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHY---TCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
           +    +  G  I   + LDH   P+  +      +++   + G   EA  +   M  + D
Sbjct: 732 ASLPALQEGKAI--CVWLDH--TPLSANQMIGNAILNMYAKCGSRDEARRIFSVMQGR-D 786

Query: 674 PVIWEVLLSSCRLHANVRLA 693
            V W  L+ +   ++  R A
Sbjct: 787 AVSWNALIGAYGSYSRGRYA 806



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 158/589 (26%), Positives = 276/589 (46%), Gaps = 65/589 (11%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP---NEVTFTA 191
           D+  GR+ H  + +    ++  V N L+ +Y KCG    A  VF ++ E    N V +TA
Sbjct: 20  DLARGRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETSVVNLVAWTA 79

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           +++  A+  +   A+ +F+ M  +  S D ++L ++      E CG   ++         
Sbjct: 80  LIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIF-----EACGNPENL--------- 125

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G+++H     L   +D+ L +SL+ MY K G +  A ++F ++ E + V+WN ++ 
Sbjct: 126 --EDGKKIHAY---LSCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMG 180

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------------- 349
            + Q  +  +A+EL   M  CGF P   T + +L A                        
Sbjct: 181 AFIQHDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLAEAGHED 240

Query: 350 -------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                        + G +    E+FD MP   V  W+A++S++     ++E+++LFR+MQ
Sbjct: 241 DVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQ 300

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
             G +P+  TL  +LS+C     LE+GK +H   ++     D  V + ++ +Y KC   E
Sbjct: 301 LEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLE 360

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A  VFHR+P   +V  N M+   ++      A   F+ M    +     +F + L +C+
Sbjct: 361 DAWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLFRYMVHEGIEFDNITFLSALCACS 420

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
             S    G   HA++ + G   DIFV +AL+ MY KCG +  A   F+ +  ++  TWN 
Sbjct: 421 GTSGLSHGEFFHARMLECGLELDIFVANALVNMYGKCGKVEAAEHVFEELPEQDVRTWNA 480

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG-LVDVGVEIFNSMQLD 635
           MI  Y QN      + +++ M+ SG KPD++TF   L AC H   L DV     +S+  +
Sbjct: 481 MILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLNACYHPRFLRDV-----HSLISE 535

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
            G+   +     ++   GR G   E   + +++  ++    W V+++SC
Sbjct: 536 TGISNTVVQ-NALVVMYGRFGLLEEGYQVFEKLD-QESITSWNVMIASC 582



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 159/319 (49%), Gaps = 14/319 (4%)

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
           R     +L  C+    L  G+Q+HA+  ++++  D  V + LI +Y KC     A +VF+
Sbjct: 5   RDRFVDLLRQCSRSKDLARGRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDASQVFY 64

Query: 464 RIPE---LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           ++ E   +++V W ++IA  + N     A   F+QM+     P + +  T+  +C    +
Sbjct: 65  QLLETSVVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPEN 124

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G+++HA +  +   +D+ +GS+LI MY KCG +  A   F  M   NTV WN ++  
Sbjct: 125 LEDGKKIHAYLSCN---SDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGA 181

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           + Q+   +EA+ LY +M+  G  P   TF+ +L A S    +  G  + +++  + G E 
Sbjct: 182 FIQHDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLA-EAGHED 240

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS----CRLHANVRLAKRA 696
            +   T +++  G+ G   EA  + D MP + D ++W  ++S+         ++RL ++ 
Sbjct: 241 DVVVQTALVNMYGKCGSVVEAVEVFDRMP-RHDVILWSAVISAHVNCAEYEESLRLFRKM 299

Query: 697 AEELFRLDPKNSAPYSLLA 715
             E  R  P N    S+L+
Sbjct: 300 QLEGNR--PNNVTLVSVLS 316



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 10/217 (4%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ-FFDMM 566
           F  +L  C++     +GRQ+HA I +     D  VG+ LI+MY KCG +  A Q F+ ++
Sbjct: 8   FVDLLRQCSRSKDLARGRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLL 67

Query: 567 HGK--NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
                N V W  +I  YA+NG    A+RL++ M   G  PD IT V I  AC +   ++ 
Sbjct: 68  ETSVVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLED 127

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G +I   +  +  V  +L   + +I   G+ G   EA ++   M  + + V W  L+ + 
Sbjct: 128 GKKIHAYLSCNSDV--VLG--SSLITMYGKCGSLSEACLMFQSME-EWNTVAWNSLMGAF 182

Query: 685 RLHANVRLAKRAAEELFRLD--PKNSAPYSLLANIYS 719
             H  V  A     E+ +    P      ++LA I S
Sbjct: 183 IQHDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAISS 219


>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
 gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
          Length = 702

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 226/731 (30%), Positives = 372/731 (50%), Gaps = 84/731 (11%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           +T   N +I +Y+K    ++A++LFDKMP +++ SWN ++S    +   + AYKLF  MP
Sbjct: 5   NTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMP 64

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
            R++ SW  +I+   RNG  EKA  +++            +L   ++             
Sbjct: 65  RRDLFSWTLMITCYTRNGEVEKARELFD------------SLPCSYR------------- 99

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
                      K +   NA++S Y K G    A  +F+EM   N +++ +M++G  +  +
Sbjct: 100 -----------KGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRK 148

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ-----SDNKFSRNVHG 256
           +   LE F  M  +    D VS + ++            D F Q     S  KF +    
Sbjct: 149 MRLGLEFFNEMDER----DVVSWNLMV------------DGFIQVGDLDSAWKFFQETQK 192

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
             V                 ++L  +A+NG++  +  +F  +P R++VSWN MI+ Y Q+
Sbjct: 193 PNVVSWV-------------TMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQR 239

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
            +  +A  L + M     E D V+   M+   VR G +   RE+ + MP  ++ +  AM+
Sbjct: 240 CEIDEASRLFEEMP----ERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMI 295

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL-KTAS 435
           S Y Q     EA + F E+          T  ++  +    G    G+   A  L K   
Sbjct: 296 SGYIQCNKVDEARRFFDEI---------GTWDVVCWNAMIAGYAHHGRINEALCLSKRMV 346

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
           + D    + +I  Y++  + + A ++F  + E D+V WNS+IAG  LN  +++A   F  
Sbjct: 347 NKDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFAL 406

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M      P Q SFA  LSSCA +++   G Q+H  + K GY+N + V +ALI MY KCG 
Sbjct: 407 MGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGR 466

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           I  A   F+ +   + ++WN +I GYA NGYG EA++L+++M + G+ PD++TF+ IL+A
Sbjct: 467 ILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSA 526

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           C+H+G+VD G+++F  M   + +EP+ +HY CM+D LGR G   EA  ++  M  K    
Sbjct: 527 CNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAG 586

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMS 735
           +W  LL +CR H N+ L + AA +L   +P  ++ Y LL+NI++   RW++++ VR LM+
Sbjct: 587 VWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVRMLMN 646

Query: 736 ENCIVKDPAYS 746
            +  VK+P  S
Sbjct: 647 ASSTVKEPGCS 657


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/629 (33%), Positives = 341/629 (54%), Gaps = 57/629 (9%)

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
           + + NALLS++ + G    A  VF +MSE +  ++  ++ G AK     EAL ++  M+ 
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
             +  +  +  SVL  CA    GV SD+             G+++H   I+ GFE+D+ +
Sbjct: 192 AEIRPNVYTFPSVLKTCA----GV-SDI-----------ARGKEIHAHVIRFGFESDVDV 235

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
            N+L+ MY K GD+ +A ++F  +P+R  +SWN MI+GY +     + +EL   M+    
Sbjct: 236 GNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSV 295

Query: 335 EPDEVTSINMLVAC----------------VRS-------------------GDIKTGRE 359
           +PD +T   +  AC                V+S                   G ++    
Sbjct: 296 DPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAET 355

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F  M S  V SW AM++S    +   +A++ ++ M+  G+ PD  TL  +LS+CA +G 
Sbjct: 356 VFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGH 415

Query: 420 LESGKQVHAASLKTA--SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
           L+ G ++H  ++KT   SH+   V++ LI +YSKC+  + A  VF  I   ++V W S+I
Sbjct: 416 LDLGIRLHEIAIKTGLVSHV--IVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLI 473

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            GL +N+   EA +FF+QM+++ M P   +  +VLS+CA++ +  +G+++HA   + G  
Sbjct: 474 LGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVG 532

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
            D F+ +A+++MY +CG    A   F+    K+   WN ++ GYAQ G    AV L+  M
Sbjct: 533 FDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKM 591

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           +   + PD+ITF+++L ACS SG+V  G+E FN M+  + + P L HY C++D LGRAG 
Sbjct: 592 LELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQ 651

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
             +A   I +MP + D  IW  LL++CR+H NV L + AA+ +F  D K+   Y LL N+
Sbjct: 652 LDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNL 711

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y+  G WD +  VR LM E  +  DP  S
Sbjct: 712 YAGCGNWDKVSKVRSLMRERGLSADPGCS 740



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/608 (26%), Positives = 285/608 (46%), Gaps = 96/608 (15%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA+LS   +  +L  A+ +F +M ER+V SWN L+    + G  ++AL++Y++M      
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T  SV K    + D+  G+  H  VI+ G + ++ V NAL+++Y KCG   +A  +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F++M + + +++ AM+SG  +    +E LE+F +M   +V  D +++++V   C      
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACE----- 310

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                    + +  R VHG       +K  F  D+ ++NSL+ MY+  G ++ AE +FS 
Sbjct: 311 ------LLDNERLGRGVHG-----YVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSR 359

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD---- 353
           +  + VVSW  MIA         KA+E  + M+  G  PDE+T +++L AC   G     
Sbjct: 360 MESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLG 419

Query: 354 -------IKTG------------------------REMFDSMPSPSVSSWNAMLSSYSQS 382
                  IKTG                         E+F ++   +V SW +++     +
Sbjct: 420 IRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRIN 479

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               EA+  FR+M+   +KP+  TL  +LS+CA +G L  GK++HA +L+T    D ++ 
Sbjct: 480 NRSFEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLP 538

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + ++ +Y +C R   A   F+   + D+  WN ++ G +       A   F +M + E++
Sbjct: 539 NAILDMYVRCGRKVPALNQFNSQKK-DVTAWNILLTGYAQQGQAKLAVELFDKMLELEIH 597

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P + +F ++L +C+                                   K G +    ++
Sbjct: 598 PDEITFISLLCACS-----------------------------------KSGMVTEGLEY 622

Query: 563 FDMMHGKNTVTWNE-----MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
           F++M  K  +T N      ++    + G  D+A    +DM    ++PD   + A+L AC 
Sbjct: 623 FNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDM---PIRPDAAIWGALLNACR 679

Query: 618 HSGLVDVG 625
               V++G
Sbjct: 680 IHRNVELG 687



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 204/413 (49%), Gaps = 57/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H +++++    D  + N LI++YS       A+ +F +M  KD             
Sbjct: 318 GRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKD------------- 364

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             VVSW  +I++LV + L  KA+  Y  M  EG +P  ITL SV
Sbjct: 365 ------------------VVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSV 406

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   +  ++ G R H + IK GL  ++ V+N+L+ +Y+KC    +A+ VF  +S  N 
Sbjct: 407 LSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNV 466

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T+++ GL   +R  EAL  FR M ++++  +SV+L SVL  CAR G           
Sbjct: 467 VSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLISVLSACARIGA---------- 515

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                  + G+++H   ++ G   D  L N++LDMY + G    A   F N  ++ V +W
Sbjct: 516 ------LMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQF-NSQKKDVTAW 568

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N+++ GY Q+ Q+  A+EL  +M      PDE+T I++L AC +SG +  G E F+ M  
Sbjct: 569 NILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKN 628

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               +P++  +  ++    ++    +A    ++M  R   PD      +L++C
Sbjct: 629 KYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIR---PDAAIWGALLNAC 678



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 212/451 (47%), Gaps = 82/451 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HAH++R G   D  + N LI +Y KC                              
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCG----------------------------- 247

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+  A  LFD+MP+R+ +SWN +IS    NG   + L +++ M      P  IT+ +V
Sbjct: 248 --DISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTV 305

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L +   GR  HG V+K     +I + N+L+ +Y+  G  + A  VF  M   + 
Sbjct: 306 ASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDV 365

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM++ L       +A+E +++M  + +  D ++L SVL  CA   C    D+    
Sbjct: 366 VSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACA---CIGHLDL---- 418

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G ++H + IK G  + + +SNSL+DMY+K   +D+A  +F N+  ++VVSW
Sbjct: 419 ---------GIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSW 469

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
             +I G     +S +A+   ++MK    +P+ VT I++L AC R G +  G+E+      
Sbjct: 470 TSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHALR 528

Query: 361 ----FDS-MPSP-----------------------SVSSWNAMLSSYSQSENHKEAIKLF 392
               FD  +P+                         V++WN +L+ Y+Q    K A++LF
Sbjct: 529 TGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELF 588

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            +M    + PD  T   +L +C+  G++  G
Sbjct: 589 DKMLELEIHPDEITFISLLCACSKSGMVTEG 619



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 159/312 (50%), Gaps = 5/312 (1%)

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAML 376
           + ++  EL+   KSC      V   N L++  VR G++     +F  M    V SWN ++
Sbjct: 115 EGSRVYELVSSSKSCLC----VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLV 170

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
             Y+++    EA+ L+  M +  ++P+  T   +L +CA +  +  GK++HA  ++    
Sbjct: 171 GGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFE 230

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D  V + LI +Y KC     A  +F ++P+ D + WN+MI+G   N   +E    F  M
Sbjct: 231 SDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMM 290

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R+  + P   +  TV S+C  L +   GR VH  + K  +  DI + ++LI+MY   G +
Sbjct: 291 RELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRL 350

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             A   F  M  K+ V+W  MI     +    +AV  YK M   G+ PD+IT V++L+AC
Sbjct: 351 EEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSAC 410

Query: 617 SHSGLVDVGVEI 628
           +  G +D+G+ +
Sbjct: 411 ACIGHLDLGIRL 422



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 152/324 (46%), Gaps = 23/324 (7%)

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
           N ++A+K    M    ++ +      +L  C      + G +V+     + S +   + +
Sbjct: 77  NLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGN 136

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            L+ ++ +      A  VF ++ E D+  WN ++ G +      EA   + +M   E+ P
Sbjct: 137 ALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRP 196

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
             ++F +VL +CA +S   +G+++HA + + G+ +D+ VG+ALI MY KCGDI  AR  F
Sbjct: 197 NVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLF 256

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D M  ++ ++WN MI GY +NG G E + L+  M    V PD IT   + +AC       
Sbjct: 257 DKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC------- 309

Query: 624 VGVEIFNSMQLDHGVEPI---------LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
              E+ ++ +L  GV            +     +I      G   EAE +   M  K D 
Sbjct: 310 ---ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK-DV 365

Query: 675 VIWEVLLSSCRLHANVRLAKRAAE 698
           V W  +++S   H   +L  +A E
Sbjct: 366 VSWTAMIASLVSH---KLPFKAVE 386



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 5/116 (4%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + GK +HAH LR G+  D FL N ++++Y +C     A + F+    KD+ +WN +L+
Sbjct: 515 ALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLT 573

Query: 63  AQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE 114
              +    + A +LFD+M E  +    +++ +L+ A  ++G+  + L  +N M N+
Sbjct: 574 GYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNK 629


>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Cucumis sativus]
          Length = 804

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 235/774 (30%), Positives = 386/774 (49%), Gaps = 85/774 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LHAHI+   L +D     +LIE YS+  +  S+  +F      D + W  +L +      
Sbjct: 20  LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSH----- 74

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                                     V NG  ++A+S+Y++M ++       T  SV +A
Sbjct: 75  --------------------------VWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRA 108

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            +   D+  G+R HG +IK G D +  V  ALLS+Y + G+   A  VF EM   + V++
Sbjct: 109 CSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSW 168

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           ++++S + +   + E L+ FR M+ +  + DSV + +V+  C   G             +
Sbjct: 169 SSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGV-----------LR 217

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
            +++ HG       +K G E D  + +SL+ MYAK G + SAE++F N+  RS  +W  M
Sbjct: 218 LAKSAHG-----YILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAM 272

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----------- 358
           I+ Y       +A+ L   M+    EP+ VT   +L +C     ++ G+           
Sbjct: 273 ISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDL 332

Query: 359 -------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                    ++   +    ++ WN ++S Y+Q    KE + LF 
Sbjct: 333 DANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFV 392

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
            MQ +G  PD  +LA  LS+    G L+ G Q+H   +K    +D YV + LI +YSKC 
Sbjct: 393 RMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRP-FMDEYVFNSLINMYSKCG 451

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
             +LA  +F ++    +V WNSMI+GLS N    +A   F  M        + +F +V+ 
Sbjct: 452 YVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQ 511

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           +C+ L    +G+ +H ++   G    IF+ +AL++MY KCGD+  A++ FD M  ++ V+
Sbjct: 512 ACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVS 571

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W+ +I  Y  +G   E + L+  M+ SG+KP+D+T + +L+ACSH+G V  G+  FNSM+
Sbjct: 572 WSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMR 631

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
            D G+EP  +H+ C++D L RAG   EA  +I  MP      IW  LL+ CR+H  + +A
Sbjct: 632 -DFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIA 690

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           K    EL+ +   ++  Y+LL+NIY++ G W++   VR +M    + K PAYS+
Sbjct: 691 KNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSV 744



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 162/602 (26%), Positives = 283/602 (47%), Gaps = 60/602 (9%)

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +FKAST L  +    + H  +I   L  +   +  L+  Y++ G  + +  VF     P+
Sbjct: 7   LFKASTTLRTLA---QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPD 63

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFA 244
              +  ++          EA+ ++  M+ + +  +S +  SVL  C+  G  GV      
Sbjct: 64  SFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGV------ 117

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      GQ+VH   IK GF+ D  ++ +LL +Y + G +DSA  +F  +P R +V
Sbjct: 118 -----------GQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLV 166

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           SW+ +I+   +  +  + ++  + M S G  PD V  + ++ AC                
Sbjct: 167 SWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYI 226

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + G +++   +F+++   S S+W AM+SSY+     KEA+
Sbjct: 227 LKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEAL 286

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID-NYVASGLIGI 448
            LF  MQ   V+P+  T+ IIL SC  + +L  GK VH   +K     + + +   L+ +
Sbjct: 287 ALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLEL 346

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+   +++L E++ H I    I  WN++I+  +   L  E    F +M++    P  FS 
Sbjct: 347 YAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSL 406

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           A+ LS+         G Q+H  + K  ++++ +V ++LI MY KCG +  A   FD M  
Sbjct: 407 ASSLSASGNEGELQLGLQIHGHVIKRPFMDE-YVFNSLINMYSKCGYVDLAYMIFDQMEP 465

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           K  VTWN MI G +QNGY  +A+ L+  M  +  +  ++ FV+++ ACSH G ++ G  I
Sbjct: 466 KGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWI 525

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
            + + +  GV   +   T ++D   + G    A+ + D M  +   V W  L+SS  +H 
Sbjct: 526 HHKL-ITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMS-ERSVVSWSSLISSYGVHG 583

Query: 689 NV 690
            +
Sbjct: 584 QI 585



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/617 (23%), Positives = 269/617 (43%), Gaps = 97/617 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  I+++G   D  +   L+ +Y +     SA+ +F +MP +D+ SW++I+S+  +
Sbjct: 118 GQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVE 177

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                          NG   + L  +  M +EG  P  + + +V
Sbjct: 178 -------------------------------NGEINEGLDAFRCMVSEGGTPDSVLVLTV 206

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A   L  +   +  HG ++K G++ + +V ++L+ +YAKCG  + A  VFE ++  + 
Sbjct: 207 VEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRST 266

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            T+TAM+S       + EAL +F  M +  V  +SV++  +L  C               
Sbjct: 267 STWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSC--------------- 311

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLH-LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
               S    G+ VHC+ IK   +A+L  L  +LL++YA     D  E I   +  R +  
Sbjct: 312 -TNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAV 370

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
           WN +I+ Y QK    + ++L  RM+  GF PD  +  + L A    G+++ G +      
Sbjct: 371 WNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVI 430

Query: 360 ----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +FD M    V +WN+M+S  SQ+    +AI L
Sbjct: 431 KRPFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISL 490

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F  M     +        ++ +C+ +G LE GK +H   +        ++ + L+ +Y+K
Sbjct: 491 FDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAK 550

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   + A+RVF  + E  +V W+S+I+   ++    E    F +M ++ + P   +   V
Sbjct: 551 CGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNV 610

Query: 512 LSSCAKLSSSFQG-------RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           LS+C+      +G       R    + +++ +V        ++++  + GD+  A +   
Sbjct: 611 LSACSHAGCVKEGMLFFNSMRDFGIEPKREHFV-------CIVDLLSRAGDLDEAYEIIK 663

Query: 565 MM-HGKNTVTWNEMIHG 580
           +M        W  +++G
Sbjct: 664 LMPFPPGASIWGALLNG 680



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 143/321 (44%), Gaps = 7/321 (2%)

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L +  Q+HA  + TA H D   ++ LI  YS+    + +  VF      D   W  ++  
Sbjct: 14  LRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKS 73

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
              N    EA   + QM   ++    ++F +VL +C+       G++VH +I K G+  D
Sbjct: 74  HVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMD 133

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
             V +AL+ +Y + G +  AR+ F  M  ++ V+W+ +I    +NG  +E +  ++ M++
Sbjct: 134 PVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVS 193

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
            G  PD +  + ++ AC   G++ +       + L  G+E      + +I    + G   
Sbjct: 194 EGGTPDSVLVLTVVEACGELGVLRLAKSAHGYI-LKRGIENDRFVDSSLIFMYAKCGSLR 252

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
            AE++ + +  +     W  ++SS  L   +   K A      +      P S+   I  
Sbjct: 253 SAEIVFENVTYRSTST-WTAMISSYNLGGYL---KEALALFVSMQKTEVEPNSVTMRII- 307

Query: 720 SLGRWDDLRAVRELMSENCIV 740
            L    +L  +RE  S +C+V
Sbjct: 308 -LRSCTNLSLLREGKSVHCVV 327


>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g69350, mitochondrial-like
           [Cucumis sativus]
          Length = 804

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 235/774 (30%), Positives = 386/774 (49%), Gaps = 85/774 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LHAHI+   L +D     +LIE YS+  +  S+  +F      D + W  +L +      
Sbjct: 20  LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSH----- 74

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                                     V NG  ++A+S+Y++M ++       T  SV +A
Sbjct: 75  --------------------------VWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRA 108

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            +   D+  G+R HG +IK G D +  V  ALLS+Y + G+   A  VF EM   + V++
Sbjct: 109 CSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSW 168

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           ++++S + +   + E L+ FR M+ +  + DSV + +V+  C   G             +
Sbjct: 169 SSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGV-----------LR 217

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
            +++ HG       +K G E D  + +SL+ MYAK G + SAE++F N+  RS  +W  M
Sbjct: 218 LAKSAHG-----YILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAM 272

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----------- 358
           I+ Y       +A+ L   M+    EP+ VT   +L +C     ++ G+           
Sbjct: 273 ISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDL 332

Query: 359 -------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                    ++   +    ++ WN ++S Y+Q    KE + LF 
Sbjct: 333 DANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFV 392

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
            MQ +G  PD  +LA  LS+    G L+ G Q+H   +K    +D YV + LI +YSKC 
Sbjct: 393 RMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRP-FMDEYVFNSLINMYSKCG 451

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
             +LA  +F ++    +V WNSMI+GLS N    +A   F  M        + +F +V+ 
Sbjct: 452 YVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQ 511

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           +C+ L    +G+ +H ++   G    IF+ +AL++MY KCGD+  A++ FD M  ++ V+
Sbjct: 512 ACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVS 571

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W+ +I  Y  +G   E + L+  M+ SG+KP+D+T + +L+ACSH+G V  G+  FNSM+
Sbjct: 572 WSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMR 631

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
            D G+EP  +H+ C++D L RAG   EA  +I  MP      IW  LL+ CR+H  + +A
Sbjct: 632 -DFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIA 690

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           K    EL+ +   ++  Y+LL+NIY++ G W++   VR +M    + K PAYS+
Sbjct: 691 KNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSV 744



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 162/602 (26%), Positives = 283/602 (47%), Gaps = 60/602 (9%)

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +FKAST L  +    + H  +I   L  +   +  L+  Y++ G  + +  VF     P+
Sbjct: 7   LFKASTTLRQLA---QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPD 63

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFA 244
              +  ++          EA+ ++  M+ + +  +S +  SVL  C+  G  GV      
Sbjct: 64  SFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGV------ 117

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      GQ+VH   IK GF+ D  ++ +LL +Y + G +DSA  +F  +P R +V
Sbjct: 118 -----------GQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLV 166

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           SW+ +I+   +  +  + ++  + M S G  PD V  + ++ AC                
Sbjct: 167 SWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYI 226

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + G +++   +F+++   S S+W AM+SSY+     KEA+
Sbjct: 227 LKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEAL 286

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID-NYVASGLIGI 448
            LF  MQ   V+P+  T+ IIL SC  + +L  GK VH   +K     + + +   L+ +
Sbjct: 287 ALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLEL 346

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+   +++L E++ H I    I  WN++I+  +   L  E    F +M++    P  FS 
Sbjct: 347 YAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSL 406

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           A+ LS+         G Q+H  + K  ++++ +V ++LI MY KCG +  A   FD M  
Sbjct: 407 ASSLSASGNEGELQLGLQIHGHVIKRPFMDE-YVFNSLINMYSKCGYVDLAYMIFDQMEP 465

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           K  VTWN MI G +QNGY  +A+ L+  M  +  +  ++ FV+++ ACSH G ++ G  I
Sbjct: 466 KGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWI 525

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
            + + +  GV   +   T ++D   + G    A+ + D M  +   V W  L+SS  +H 
Sbjct: 526 HHKL-ITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMS-ERSVVSWSSLISSYGVHG 583

Query: 689 NV 690
            +
Sbjct: 584 QI 585



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/617 (23%), Positives = 269/617 (43%), Gaps = 97/617 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  I+++G   D  +   L+ +Y +     SA+ +F +MP +D+ SW++I+S+  +
Sbjct: 118 GQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVE 177

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                          NG   + L  +  M +EG  P  + + +V
Sbjct: 178 -------------------------------NGEINEGLDAFRCMVSEGGTPDSVLVLTV 206

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A   L  +   +  HG ++K G++ + +V ++L+ +YAKCG  + A  VFE ++  + 
Sbjct: 207 VEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRST 266

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            T+TAM+S       + EAL +F  M +  V  +SV++  +L  C               
Sbjct: 267 STWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSC--------------- 311

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLH-LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
               S    G+ VHC+ IK   +A+L  L  +LL++YA     D  E I   +  R +  
Sbjct: 312 -TNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAV 370

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
           WN +I+ Y QK    + ++L  RM+  GF PD  +  + L A    G+++ G +      
Sbjct: 371 WNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVI 430

Query: 360 ----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +FD M    V +WN+M+S  SQ+    +AI L
Sbjct: 431 KRPFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISL 490

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F  M     +        ++ +C+ +G LE GK +H   +        ++ + L+ +Y+K
Sbjct: 491 FDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAK 550

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   + A+RVF  + E  +V W+S+I+   ++    E    F +M ++ + P   +   V
Sbjct: 551 CGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNV 610

Query: 512 LSSCAKLSSSFQG-------RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           LS+C+      +G       R    + +++ +V        ++++  + GD+  A +   
Sbjct: 611 LSACSHAGCVKEGMLFFNSMRDFGIEPKREHFV-------CIVDLLSRAGDLDEAYEIIK 663

Query: 565 MM-HGKNTVTWNEMIHG 580
           +M        W  +++G
Sbjct: 664 LMPFPPGASIWGALLNG 680



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 141/316 (44%), Gaps = 7/316 (2%)

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           Q+HA  + TA H D   ++ LI  YS+    + +  VF      D   W  ++     N 
Sbjct: 19  QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNG 78

Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
              EA   + QM   ++    ++F +VL +C+       G++VH +I K G+  D  V +
Sbjct: 79  CYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNT 138

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
           AL+ +Y + G +  AR+ F  M  ++ V+W+ +I    +NG  +E +  ++ M++ G  P
Sbjct: 139 ALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTP 198

Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEML 664
           D +  + ++ AC   G++ +       + L  G+E      + +I    + G    AE++
Sbjct: 199 DSVLVLTVVEACGELGVLRLAKSAHGYI-LKRGIENDRFVDSSLIFMYAKCGSLRSAEIV 257

Query: 665 IDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRW 724
            + +  +     W  ++SS  L   +   K A      +      P S+   I   L   
Sbjct: 258 FENVTYRSTST-WTAMISSYNLGGYL---KEALALFVSMQKTEVEPNSVTMRII--LRSC 311

Query: 725 DDLRAVRELMSENCIV 740
            +L  +RE  S +C+V
Sbjct: 312 TNLSLLREGKSVHCVV 327


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/629 (32%), Positives = 341/629 (54%), Gaps = 55/629 (8%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
           ++ + NALLS++ + G    A  VF  M + N  ++  ++ G AK     EAL+++  M+
Sbjct: 140 SLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRML 199

Query: 214 RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
              V  D  +   VL  C                      V G+++H   I+ GFE+D+ 
Sbjct: 200 WVGVKPDVYTFPCVLRTCG----------------GMPNLVRGREIHVHVIRYGFESDVD 243

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           + N+L+ MY K GD+++A ++F  +P R  +SWN MI+GY +     + + L   M    
Sbjct: 244 VVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYP 303

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREM--------FDSMPS------PSVSS-------- 371
            +PD +T  +++ AC   GD + GR++        F   PS      P  SS        
Sbjct: 304 VDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAE 363

Query: 372 -------------WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
                        W AM+S Y      ++A++ ++ M+  G+ PD  T+AI+LS+C+ + 
Sbjct: 364 TVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLC 423

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            L+ G  +H  + +      + VA+ LI +Y+KC+  + A  +FH   E +IV W S+I 
Sbjct: 424 NLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIIL 483

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           GL +N+   EA  FF++M +  + P   +   VLS+CA++ +   G+++HA   + G   
Sbjct: 484 GLRINNRCFEALFFFREMIR-RLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSF 542

Query: 539 DIFVGSALIEMYCKCGDI-YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           D F+ +A+++MY +CG + Y  +QFF + H     +WN ++ GYA+ G G  A  L++ M
Sbjct: 543 DGFMPNAILDMYVRCGRMEYAWKQFFSVDH--EVTSWNILLTGYAERGKGAHATELFQRM 600

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           + S V P+++TF++IL ACS SG+V  G+E FNSM+  + + P L HY C++D LGR+G 
Sbjct: 601 VESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGK 660

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
             EA   I +MP K DP +W  LL+SCR+H +V L + AAE +F+ D  +   Y LL+N+
Sbjct: 661 LEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNL 720

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y+  G+WD +  VR++M +N ++ DP  S
Sbjct: 721 YADNGKWDKVAEVRKMMRQNGLIVDPGCS 749



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 277/568 (48%), Gaps = 55/568 (9%)

Query: 49  MPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY 108
           M H  +   NA+LS   +  +L  A+ +F  M +RN+ SWN L+    + GL ++AL +Y
Sbjct: 136 MSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLY 195

Query: 109 NKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC 168
           ++M   G  P   T   V +    + ++  GR  H  VI+ G + ++ V NAL+++Y KC
Sbjct: 196 HRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKC 255

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           G    A  VF++M   + +++ AM+SG  +    +E L +F +MI+  V  D ++++SV+
Sbjct: 256 GDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVI 315

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
             C   G           D++  R +HG   + L  + G +  +H  NSL+ MY+  G +
Sbjct: 316 TACELLG-----------DDRLGRQIHG---YVLRTEFGRDPSIH--NSLIPMYSSVGLI 359

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
           + AE +FS    R +VSW  MI+GY       KA+E  + M++ G  PDE+T   +L AC
Sbjct: 360 EEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSAC 419

Query: 349 -----------------------------------VRSGDIKTGREMFDSMPSPSVSSWN 373
                                               +   I    E+F S    ++ SW 
Sbjct: 420 SCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWT 479

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           +++     +    EA+  FREM  R +KP+  TL  +LS+CA +G L  GK++HA +L+T
Sbjct: 480 SIILGLRINNRCFEALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRT 538

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               D ++ + ++ +Y +C R E A + F  + + ++  WN ++ G +       A   F
Sbjct: 539 GVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELF 597

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE-KDGYVNDIFVGSALIEMYCK 552
           ++M ++ + P + +F ++L +C++     +G +    ++ K   + ++   + ++++  +
Sbjct: 598 QRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGR 657

Query: 553 CGDIYGARQFFDMMHGK-NTVTWNEMIH 579
            G +  A +F   M  K +   W  +++
Sbjct: 658 SGKLEEAYEFIQKMPMKPDPAVWGALLN 685



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 229/495 (46%), Gaps = 96/495 (19%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +H H++R G   D  + N LI +Y KC + ++A+ +FDKMP++D  SWNA++S  
Sbjct: 224 VRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGY 283

Query: 65  CKSDDLEFAYKLF----------DEMPERNVVS--------------------------- 87
            ++       +LF          D M   +V++                           
Sbjct: 284 FENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDP 343

Query: 88  --WNNLISALVRNGLEEKALSVYNK-------------------------------MSNE 114
              N+LI      GL E+A +V+++                               M  E
Sbjct: 344 SIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAE 403

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G +P  IT+A V  A + L +++ G   H +  + GL     VAN+L+ +YAKC     A
Sbjct: 404 GIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKA 463

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
           + +F    E N V++T+++ GL   +R  EAL  FR MIR+ +  +SV+L  VL  CAR 
Sbjct: 464 LEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARI 522

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
           G                    G+++H   ++ G   D  + N++LDMY + G M+ A   
Sbjct: 523 GA----------------LTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQ 566

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F ++ +  V SWN+++ GY ++ +   A EL QRM      P+EVT I++L AC RSG +
Sbjct: 567 FFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMV 625

Query: 355 KTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
             G E F+SM       P++  +  ++    +S   +EA +  ++M    +KPD      
Sbjct: 626 AEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMP---MKPDPAVWGA 682

Query: 410 ILSSCAAMGILESGK 424
           +L+SC     +E G+
Sbjct: 683 LLNSCRIHHHVELGE 697



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 148/291 (50%), Gaps = 7/291 (2%)

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
           + G +V++    + SH+   + + L+ ++ +      A  VF R+ + ++  WN ++ G 
Sbjct: 123 KEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGY 182

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           +   L  EA   + +M    + P  ++F  VL +C  + +  +GR++H  + + G+ +D+
Sbjct: 183 AKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDV 242

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            V +ALI MY KCGD+  AR  FD M  ++ ++WN MI GY +NG   E +RL+  MI  
Sbjct: 243 DVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKY 302

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNS-MQLDHGVEPILDHYTCMIDCLGRAGHFH 659
            V PD +T  +++TAC   G   +G +I    ++ + G +P +  +  +I      G   
Sbjct: 303 PVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSI--HNSLIPMYSSVGLIE 360

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
           EAE +     C+ D V W  ++S    + N  + ++A E    ++ +   P
Sbjct: 361 EAETVFSRTECR-DLVSWTAMISG---YENCLMPQKALETYKMMEAEGIMP 407



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 3/201 (1%)

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
           L +LD  A  +   M +  +     ++  ++  C    +  +G +V++ +        + 
Sbjct: 84  LGNLD-RAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQ 142

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           +G+AL+ M+ + G++  A   F  M  +N  +WN ++ GYA+ G  DEA+ LY  M+  G
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           VKPD  TF  +L  C     +  G EI   + + +G E  +D    +I    + G  + A
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHV-IRYGFESDVDVVNALITMYVKCGDVNTA 261

Query: 662 EMLIDEMPCKDDPVIWEVLLS 682
            ++ D+MP +D  + W  ++S
Sbjct: 262 RLVFDKMPNRDR-ISWNAMIS 281



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A   GK +HAH LR G+  D F+ N ++++Y +C     A   F  + H ++ SWN +L+
Sbjct: 524 ALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDH-EVTSWNILLT 582

Query: 63  AQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
              +      A +LF  M E NV    V++ +++ A  R+G+  + L  +N M
Sbjct: 583 GYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSM 635


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/629 (33%), Positives = 341/629 (54%), Gaps = 57/629 (9%)

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
           + + NALLS++ + G    A  VF +MSE +  ++  ++ G AK     EAL ++  M+ 
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
             +  +  +  SVL  CA    GV SD+             G+++H   I+ GFE+D+ +
Sbjct: 192 AEIRPNVYTFPSVLKTCA----GV-SDI-----------ARGKEIHAHVIRFGFESDVDV 235

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
            N+L+ MY K GD+ +A ++F  +P+R  +SWN MI+GY +     + +EL   M+    
Sbjct: 236 GNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSV 295

Query: 335 EPDEVTSINMLVAC----------------VRS-------------------GDIKTGRE 359
           +PD +T   +  AC                V+S                   G ++    
Sbjct: 296 DPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAET 355

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F  M S  V SW AM++S    +   +A++ ++ M+  G+ PD  TL  +LS+CA +G 
Sbjct: 356 VFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGH 415

Query: 420 LESGKQVHAASLKTA--SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
           L+ G ++H  ++KT   SH+   V++ LI +YSKC+  + A  VF  I   ++V W S+I
Sbjct: 416 LDLGIRLHEIAIKTGLVSHV--IVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLI 473

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            GL +N+   EA +FF+QM+++ M P   +  +VLS+CA++ +  +G+++HA   + G  
Sbjct: 474 LGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVG 532

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
            D F+ +A+++MY +CG    A   F+    K+   WN ++ GYAQ G    AV L+  M
Sbjct: 533 FDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKM 591

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           +   + PD+ITF+++L ACS SG+V  G+E FN M+  + + P L HY C++D LGRAG 
Sbjct: 592 LELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQ 651

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
             +A   I +MP + D  IW  LL++CR+H NV L + AA+ +F  D K+   Y LL N+
Sbjct: 652 LDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNL 711

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y+  G WD +  VR LM E  +  DP  S
Sbjct: 712 YAGCGNWDKVSKVRSLMRERGLSADPGCS 740



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/608 (26%), Positives = 285/608 (46%), Gaps = 96/608 (15%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA+LS   +  +L  A+ +F +M ER+V SWN L+    + G  ++AL++Y++M      
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T  SV K    + D+  G+  H  VI+ G + ++ V NAL+++Y KCG   +A  +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F++M + + +++ AM+SG  +    +E LE+F +M   +V  D +++++V   C      
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACE----- 310

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                    + +  R VHG       +K  F  D+ ++NSL+ MY+  G ++ AE +FS 
Sbjct: 311 ------LLDNERLGRGVHG-----YVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSR 359

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD---- 353
           +  + VVSW  MIA         KA+E  + M+  G  PDE+T +++L AC   G     
Sbjct: 360 MESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLG 419

Query: 354 -------IKTG------------------------REMFDSMPSPSVSSWNAMLSSYSQS 382
                  IKTG                         E+F ++   +V SW +++     +
Sbjct: 420 IRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRIN 479

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               EA+  FR+M+   +KP+  TL  +LS+CA +G L  GK++HA +L+T    D ++ 
Sbjct: 480 NRSFEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLP 538

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + ++ +Y +C R   A   F+   + D+  WN ++ G +       A   F +M + E++
Sbjct: 539 NAILDMYVRCGRKVPALNQFNSQKK-DVTAWNILLTGYAQQGQAKLAVELFDKMLELEIH 597

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P + +F ++L +C+                                   K G +    ++
Sbjct: 598 PDEITFISLLCACS-----------------------------------KSGMVTEGLEY 622

Query: 563 FDMMHGKNTVTWNE-----MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
           F++M  K  +T N      ++    + G  D+A    +DM    ++PD   + A+L AC 
Sbjct: 623 FNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDM---PIRPDAAIWGALLNACR 679

Query: 618 HSGLVDVG 625
               V++G
Sbjct: 680 IHRNVELG 687



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 204/413 (49%), Gaps = 57/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H +++++    D  + N LI++YS       A+ +F +M  KD             
Sbjct: 318 GRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKD------------- 364

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             VVSW  +I++LV + L  KA+  Y  M  EG +P  ITL SV
Sbjct: 365 ------------------VVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSV 406

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   +  ++ G R H + IK GL  ++ V+N+L+ +Y+KC    +A+ VF  +S  N 
Sbjct: 407 LSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNV 466

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T+++ GL   +R  EAL  FR M ++++  +SV+L SVL  CAR G           
Sbjct: 467 VSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLISVLSACARIGA---------- 515

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                  + G+++H   ++ G   D  L N++LDMY + G    A   F N  ++ V +W
Sbjct: 516 ------LMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQF-NSQKKDVTAW 568

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N+++ GY Q+ Q+  A+EL  +M      PDE+T I++L AC +SG +  G E F+ M  
Sbjct: 569 NILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKN 628

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               +P++  +  ++    ++    +A    ++M  R   PD      +L++C
Sbjct: 629 KYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIR---PDAAIWGALLNAC 678



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 212/451 (47%), Gaps = 82/451 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HAH++R G   D  + N LI +Y KC                              
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCG----------------------------- 247

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+  A  LFD+MP+R+ +SWN +IS    NG   + L +++ M      P  IT+ +V
Sbjct: 248 --DISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTV 305

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L +   GR  HG V+K     +I + N+L+ +Y+  G  + A  VF  M   + 
Sbjct: 306 ASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDV 365

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM++ L       +A+E +++M  + +  D ++L SVL  CA   C    D+    
Sbjct: 366 VSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACA---CIGHLDL---- 418

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G ++H + IK G  + + +SNSL+DMY+K   +D+A  +F N+  ++VVSW
Sbjct: 419 ---------GIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSW 469

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
             +I G     +S +A+   ++MK    +P+ VT I++L AC R G +  G+E+      
Sbjct: 470 TSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHALR 528

Query: 361 ----FDS-MPSP-----------------------SVSSWNAMLSSYSQSENHKEAIKLF 392
               FD  +P+                         V++WN +L+ Y+Q    K A++LF
Sbjct: 529 TGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELF 588

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            +M    + PD  T   +L +C+  G++  G
Sbjct: 589 DKMLELEIHPDEITFISLLCACSKSGMVTEG 619



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 159/312 (50%), Gaps = 5/312 (1%)

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAML 376
           + ++  EL+   KSC      V   N L++  VR G++     +F  M    V SWN ++
Sbjct: 115 EGSRVYELVSSSKSCLC----VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLV 170

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
             Y+++    EA+ L+  M +  ++P+  T   +L +CA +  +  GK++HA  ++    
Sbjct: 171 GGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFE 230

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D  V + LI +Y KC     A  +F ++P+ D + WN+MI+G   N   +E    F  M
Sbjct: 231 SDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMM 290

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R+  + P   +  TV S+C  L +   GR VH  + K  +  DI + ++LI+MY   G +
Sbjct: 291 RELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRL 350

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             A   F  M  K+ V+W  MI     +    +AV  YK M   G+ PD+IT V++L+AC
Sbjct: 351 EEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSAC 410

Query: 617 SHSGLVDVGVEI 628
           +  G +D+G+ +
Sbjct: 411 ACIGHLDLGIRL 422



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 152/324 (46%), Gaps = 23/324 (7%)

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
           N ++A+K    M    ++ +      +L  C      + G +V+     + S +   + +
Sbjct: 77  NLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGN 136

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            L+ ++ +      A  VF ++ E D+  WN ++ G +      EA   + +M   E+ P
Sbjct: 137 ALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRP 196

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
             ++F +VL +CA +S   +G+++HA + + G+ +D+ VG+ALI MY KCGDI  AR  F
Sbjct: 197 NVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLF 256

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D M  ++ ++WN MI GY +NG G E + L+  M    V PD IT   + +AC       
Sbjct: 257 DKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC------- 309

Query: 624 VGVEIFNSMQLDHGVEPI---------LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
              E+ ++ +L  GV            +     +I      G   EAE +   M  K D 
Sbjct: 310 ---ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK-DV 365

Query: 675 VIWEVLLSSCRLHANVRLAKRAAE 698
           V W  +++S   H   +L  +A E
Sbjct: 366 VSWTAMIASLVSH---KLPFKAVE 386



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 5/116 (4%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + GK +HAH LR G+  D FL N ++++Y +C     A + F+    KD+ +WN +L+
Sbjct: 515 ALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLT 573

Query: 63  AQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE 114
              +    + A +LFD+M E  +    +++ +L+ A  ++G+  + L  +N M N+
Sbjct: 574 GYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNK 629


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/615 (34%), Positives = 336/615 (54%), Gaps = 62/615 (10%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH------AVPVFEEMSEPNEVTFTAMM 193
           R  H  +IKIGL    Y  + L+     C  + H      A+ VF+ + EPN + +  M 
Sbjct: 50  RIIHAQMIKIGLHNTNYALSKLIEF---CILSPHFEGLPYAISVFKTIQEPNLLIWNTMF 106

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            G A +   V AL+++  MI   +  +S +   VL  CA+      S  F +        
Sbjct: 107 RGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK------SKAFKE-------- 152

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             GQQ+H   +KLG + DL++  SL+ MY +NG ++ A  +F   P R VVS+  +I GY
Sbjct: 153 --GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
             +                                   G I+  +++FD +P   V SWN
Sbjct: 211 ASR-----------------------------------GYIENAQKLFDEIPVKDVVSWN 235

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           AM+S Y+++ N+KEA++LF++M    V+PD +T+  ++S+CA  G +E G+QVH      
Sbjct: 236 AMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDH 295

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               +  + + LI +YSKC   E A  +F R+P  D++ WN++I G +  +L  EA + F
Sbjct: 296 GFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLF 355

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK--DGYVNDIFVGSALIEMYC 551
           ++M ++   P   +  ++L +CA L +   GR +H  I+K   G  N   + ++LI+MY 
Sbjct: 356 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 415

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCGDI  A Q F+ +  K+  +WN MI G+A +G  D +  L+  M   G++PDDITFV 
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVG 475

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +L+ACSHSG++D+G  IF +M  D+ + P L+HY CMID LG +G F EAE +I+ M  +
Sbjct: 476 LLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEME 535

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
            D VIW  LL +C++H NV L +  AE L +++P+N   Y LL+NIY+S GRW+++   R
Sbjct: 536 PDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTR 595

Query: 732 ELMSENCIVKDPAYS 746
            L+++  + K P  S
Sbjct: 596 ALLNDKGMKKVPGCS 610



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 233/467 (49%), Gaps = 30/467 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H H+L+ G   D ++   LI +Y +      A  +FDK PH+D+ S+ A++
Sbjct: 148 KAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALI 207

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   +E A KLFDE+P ++VVSWN +IS     G  ++AL ++  M      P   
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ +V  A      +E GR+ H  +   G   N+ + NAL+ LY+KCG  + A  +FE +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + +++  ++ G    +   EAL +F+ M+R   + + V++ S+L  CA  G     D
Sbjct: 328 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA---ID 384

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKL--GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           +             G+ +H    K   G      L  SL+DMYAK GD+++A  +F+++ 
Sbjct: 385 I-------------GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            +S+ SWN MI G+    ++  + +L  RM+  G +PD++T + +L AC  SG +  GR 
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491

Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +F +M      +P +  +  M+     S   KEA ++   M+   ++PD      +L +C
Sbjct: 492 IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME---MEPDGVIWCSLLKAC 548

Query: 415 AAMGILESGKQVHAASLKT-ASHIDNYVASGLIGIYSKCQR-NELAE 459
              G +E G+      +K    +  +YV   L  IY+   R NE+A+
Sbjct: 549 KMHGNVELGESFAENLIKIEPENPGSYVL--LSNIYASAGRWNEVAK 593



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 220/487 (45%), Gaps = 112/487 (22%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           +++HA +++ GL +  +  ++LIE                            ILS     
Sbjct: 50  RIIHAQMIKIGLHNTNYALSKLIEF--------------------------CILSPHF-- 81

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           + L +A  +F  + E N++ WN +      +     AL +Y  M + G +P   T   V 
Sbjct: 82  EGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 141

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL----------------------- 164
           K+       + G++ HG V+K+G D ++YV  +L+S+                       
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV 201

Query: 165 --------YAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
                   YA  G+ ++A  +F+E+   + V++ AM+SG A+T    EALE+F+ M++  
Sbjct: 202 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 261

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  ++ +V+  CA+ G  +E                G+QVH      GF ++L + N
Sbjct: 262 VRPDESTMVTVVSACAQSG-SIEL---------------GRQVHLWIDDHGFGSNLKIVN 305

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D+Y+K G++++A  +F  LP + V+SWN +I GY       +A+ L Q M   G  P
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           ++VT +++L AC                                      + GDI+   +
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 425

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F+S+   S+SSWNAM+  ++       +  LF  M+  G++PD  T   +LS+C+  G+
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485

Query: 420 LESGKQV 426
           L+ G+ +
Sbjct: 486 LDLGRHI 492



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 91/226 (40%), Gaps = 41/226 (18%)

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG---ARQFFDMM 566
           ++L +C  L S    R +HAQ+ K G  N  +  S LIE         G   A   F  +
Sbjct: 38  SLLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
              N + WN M  G+A +     A++LY  MI+ G+ P+  TF  +L +C+ S     G 
Sbjct: 95  QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154

Query: 627 EIFN------------------SMQLDHG----VEPILDH--------YTCMIDCLGRAG 656
           +I                    SM + +G       + D         YT +I      G
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           +   A+ L DE+P K D V W  ++S      N     + A ELF+
Sbjct: 215 YIENAQKLFDEIPVK-DVVSWNAMISGYAETGNY----KEALELFK 255


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 231/742 (31%), Positives = 379/742 (51%), Gaps = 62/742 (8%)

Query: 42  AQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLE 101
           A  L +  P+  IY + A  S++     L +A+ LFD+ P+R+  S+ +L+    R+G  
Sbjct: 24  ANELGNLKPNFRIYCFGAASSSR-----LYYAHNLFDKSPDRDRESYTSLLFGFSRDGRT 78

Query: 102 EKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANAL 161
           ++A  ++  + + G        +SV K S  L D   GR+ H   IK G   ++ V  +L
Sbjct: 79  QEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSL 138

Query: 162 LSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDS 221
           +  Y K    K    VF+EM E N VT+T ++SG A+     E L +F  M  +    +S
Sbjct: 139 VDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNS 198

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDM 281
            + ++ LGV A EG G                  G QVH + +K G +  + +SNSL+++
Sbjct: 199 FTFAAALGVLAEEGVGG----------------RGLQVHTVVVKNGLDKTIPVSNSLINL 242

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM------------ 329
           Y K G++  A ++F     +SVV+WN MI+GY       +A+ +   M            
Sbjct: 243 YLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSF 302

Query: 330 ----KSC-------------------GFEPDEVTSINMLVACVRSGDIKTGREMF-DSMP 365
               K C                   GF  D+     ++VA  +   +     +F ++  
Sbjct: 303 ASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGF 362

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
             +V SW AM+S + Q++  +EA+ LF EM+ +GV+P+  T ++IL++   +    S  +
Sbjct: 363 LGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVI----SPSE 418

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           VHA  +KT     + V + L+  Y K  + + A +VF  I   DIV W++M+AG +    
Sbjct: 419 VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGE 478

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGS 544
              A   F ++ +  + P +F+F+++L+ CA  ++S  QG+Q H    K    + + V S
Sbjct: 479 TEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSS 538

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
           AL+ MY K G I  A + F     K+ V+WN MI GYAQ+G   +A+ ++K+M    VK 
Sbjct: 539 ALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 598

Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEML 664
           D +TF+ +  AC+H+GLV+ G + F+ M  D  + P  +H +CM+D   RAG   +A  +
Sbjct: 599 DSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 658

Query: 665 IDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRW 724
           ID MP      IW  +L++CR+H    L + AAE++  + P++SA Y LL+N+Y+  G W
Sbjct: 659 IDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDW 718

Query: 725 DDLRAVRELMSENCIVKDPAYS 746
            +   VR+LM+E  + K+P YS
Sbjct: 719 QERAKVRKLMNERNVKKEPGYS 740



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 173/652 (26%), Positives = 295/652 (45%), Gaps = 89/652 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH   ++ G  DD  +   L++ Y K +N    +++FD+M  +++ +W         
Sbjct: 116 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTW--------- 166

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LIS   RN L E+ L+++ +M +EG  P   T    
Sbjct: 167 ----------------------TTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFT---- 200

Query: 127 FKASTALLDVE----HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           F A+  +L  E     G + H +V+K GLDK I V+N+L++LY KCG  + A  +F++  
Sbjct: 201 FAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 260

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + VT+ +M+SG A     +EAL MF  M    V +   S +S++ +CA          
Sbjct: 261 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCAN--------- 311

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
               + +F+     +Q+HC  +K GF  D ++  +L+  Y+K   M  A  +F       
Sbjct: 312 --LKELRFT-----EQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLG 364

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT--------------------- 340
           +VVSW  MI+G+ Q     +A+ L   MK  G  P+E T                     
Sbjct: 365 NVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVV 424

Query: 341 ----------SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                        +L A V+ G +    ++F  + +  + +W+AML+ Y+Q+   + AIK
Sbjct: 425 KTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIK 484

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAA-MGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +F E+   GVKP+  T + IL+ CAA    +  GKQ H  ++K+       V+S L+ +Y
Sbjct: 485 IFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 544

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +K    E AE VF R  E D+V WNSMI+G + +   ++A   FK+M++ ++     +F 
Sbjct: 545 AKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFI 604

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV-GSALIEMYCKCGDIYGARQFFDMMHG 568
            V ++C       +G +    + +D  +       S ++++Y + G +  A +  D M  
Sbjct: 605 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPN 664

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
               T    I    +     E  RL  + I + +  D   +V +    + SG
Sbjct: 665 LAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESG 716



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 222/518 (42%), Gaps = 96/518 (18%)

Query: 5   VAGKLLHAH--ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           V G+ L  H  +++NGL     + N LI LY KC N   A+ LFDK   K + +WN+   
Sbjct: 213 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNS--- 269

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                       +IS    NGL+ +AL ++  M       +  +
Sbjct: 270 ----------------------------MISGYAANGLDLEALGMFYSMRLNHVRLSESS 301

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            AS+ K    L ++    + H  V+K G   +  +  AL+  Y+KC     A+ +F+E  
Sbjct: 302 FASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETG 361

Query: 183 -EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              N V++TAM+SG  + D   EA+ +F  M RK V  +  + S +L             
Sbjct: 362 FLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPV-------- 413

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                       +   +VH   +K  +E    +  +LLD Y K G +D A  +FS +  +
Sbjct: 414 ------------ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNK 461

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
            +V+W+ M+AGY Q  ++  AI++   +   G +P+E T  ++L  C             
Sbjct: 462 DIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQF 521

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G I++  E+F       + SWN+M+S Y+Q    
Sbjct: 522 HGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQA 581

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---VHAASLKTASHIDNYVA 442
            +A+ +F+EM+ R VK D  T   + ++C   G++E G++   +     K A   ++   
Sbjct: 582 MKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH--N 639

Query: 443 SGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAG 479
           S ++ +YS+  + E A +V   +P L     W +++A 
Sbjct: 640 SCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAA 677


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 218/647 (33%), Positives = 341/647 (52%), Gaps = 53/647 (8%)

Query: 136  VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV-TFTAMMS 194
            ++ G+  H ++   G+     +   L+ +Y  CG  +    +F+ +   N+V  +  MMS
Sbjct: 467  LQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMS 526

Query: 195  GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
              AK     E++ +F+ M +  ++ +S + S +L   A  G                R  
Sbjct: 527  EYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLG----------------RVG 570

Query: 255  HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
              +++H    KLGF +   + NSL+  Y K+G++DSA  +F  L +R VVSWN MI+G  
Sbjct: 571  ECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCV 630

Query: 315  QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-------------- 360
                S  A+E   +M       D  T +N + AC   G +  GR +              
Sbjct: 631  MNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVM 690

Query: 361  ---------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                                 F+ M   +V SW +++++Y +   + +AI+LF EM+ +G
Sbjct: 691  FNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKG 750

Query: 400  VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
            V PD  ++  +L +CA    L+ G+ VH    K    +   V++ L+ +Y+KC   E A 
Sbjct: 751  VSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAY 810

Query: 460  RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
             VF +IP  DIV WN+MI G S NSL  EA   F +M Q E  P   + A +L +C  L+
Sbjct: 811  LVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITMACLLPACGSLA 869

Query: 520  SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
            +   GR +H  I ++GY +++ V +ALI+MY KCG +  AR  FDM+  K+ +TW  MI 
Sbjct: 870  ALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMIS 929

Query: 580  GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
            G   +G G+EA+  ++ M  +G+KPD+ITF +IL ACSHSGL++ G   FNSM  +  +E
Sbjct: 930  GCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNME 989

Query: 640  PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
            P L+HY CM+D L R G+  +A  LI+ MP K D  IW  LL  CR+H +V LA++ AE 
Sbjct: 990  PKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEH 1049

Query: 700  LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +F L+P N+  Y LLANIY+   +W++++ +RE + +  + K P  S
Sbjct: 1050 VFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCS 1096



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 245/545 (44%), Gaps = 82/545 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H+ I  NG+  +  L  +L+ +Y  C      + +FD +                 
Sbjct: 470 GKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHI----------------- 512

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        + +  V  WN ++S   + G   +++ ++ KM   G      T + +
Sbjct: 513 -------------LSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCI 559

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K    L  V   +R HG V K+G      V N+L++ Y K G    A  +F+E+ + + 
Sbjct: 560 LKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDV 619

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +M+SG         ALE F  M+   V +D  +L + +  CA  G           
Sbjct: 620 VSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVG----------- 668

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                R +HGQ V     K  F  ++  +N+LLDMY+K G+++ A   F  + +++VVSW
Sbjct: 669 SLSLGRALHGQGV-----KACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSW 723

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------- 359
             +IA Y ++     AI L   M+S G  PD  +  ++L AC     +  GR+       
Sbjct: 724 TSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRK 783

Query: 360 ----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +F  +P   + SWN M+  YS++    EA+KL
Sbjct: 784 NNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKL 843

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F EMQ +  +PD  T+A +L +C ++  LE G+ +H   L+     + +VA+ LI +Y K
Sbjct: 844 FAEMQ-KESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVK 902

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     A  +F  IPE D++ W  MI+G  ++ L  EA   F++MR   + P + +F ++
Sbjct: 903 CGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSI 962

Query: 512 LSSCA 516
           L +C+
Sbjct: 963 LYACS 967



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 194/404 (48%), Gaps = 58/404 (14%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N++++   KS +++ A+KLFDE+ +R+VVSWN++IS  V NG    AL  + +M     +
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQML---IL 648

Query: 118 PTHITLASVFKASTALLDVEH---GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
              + LA++  +  A  +V     GR  HG  +K    + +   N LL +Y+KCG    A
Sbjct: 649 RVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDA 708

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
           +  FE+M +   V++T++++   +     +A+ +F  M  K VS D  S++SVL  CA  
Sbjct: 709 IQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACA-- 766

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
            CG   D              G+ VH    K      L +SN+L+DMYAK G M+ A ++
Sbjct: 767 -CGNSLD-------------KGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLV 812

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------ 348
           FS +P + +VSWN MI GY +     +A++L   M+     PD +T   +L AC      
Sbjct: 813 FSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQK-ESRPDGITMACLLPACGSLAAL 871

Query: 349 -----------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
                                        V+ G +   R +FD +P   + +W  M+S  
Sbjct: 872 EIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGC 931

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
                  EAI  F++M+  G+KPD  T   IL +C+  G+L  G
Sbjct: 932 GMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEG 975



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 228/466 (48%), Gaps = 61/466 (13%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            G+ LH   ++     +    N L+++YSKC N                            
Sbjct: 673  GRALHGQGVKACFSREVMFNNTLLDMYSKCGN---------------------------- 704

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               L  A + F++M ++ VVSW +LI+A VR GL + A+ ++ +M ++G  P   ++ SV
Sbjct: 705  ---LNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSV 761

Query: 127  FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              A      ++ GR  H  + K  +   + V+NAL+ +YAKCG  + A  VF ++   + 
Sbjct: 762  LHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDI 821

Query: 187  VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            V++  M+ G +K     EAL++F  M +K    D ++++ +L  C            + +
Sbjct: 822  VSWNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITMACLLPACG-----------SLA 869

Query: 247  DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
              +  R +HG    C+ ++ G+ ++LH++N+L+DMY K G +  A ++F  +PE+ +++W
Sbjct: 870  ALEIGRGIHG----CI-LRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITW 924

Query: 307  NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             VMI+G G      +AI   Q+M+  G +PDE+T  ++L AC  SG +  G   F+SM S
Sbjct: 925  TVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMIS 984

Query: 367  -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                 P +  +  M+   +++ N  +A  L   M    +KPD T    +L  C     +E
Sbjct: 985  ECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMP---IKPDATIWGALLCGCRIHHDVE 1041

Query: 422  SGKQV--HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
              ++V  H   L+   +   YV   L  IY++ ++ E  +++  RI
Sbjct: 1042 LAEKVAEHVFELE-PDNAGYYVL--LANIYAEAEKWEEVKKLRERI 1084



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 159/354 (44%), Gaps = 18/354 (5%)

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           N  +  + +  + + A++L R  Q    + D    + IL  CA    L+ GK VH+    
Sbjct: 422 NTKICKFCEVGDLRNAVELLRMSQ--KSELDLNAYSSILQLCAEHKCLQEGKMVHSVISS 479

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVF-HRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
               I+  + + L+ +Y  C       R+F H + +  +  WN M++  +      E+  
Sbjct: 480 NGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIY 539

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            FK+M++  +    ++F+ +L   A L    + +++H  + K G+ +   V ++LI  Y 
Sbjct: 540 LFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYF 599

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           K G++  A + FD +  ++ V+WN MI G   NG+   A+  +  M+   V  D  T V 
Sbjct: 600 KSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVN 659

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT----CMIDCLGRAGHFHEAEMLIDE 667
            + AC++ G + +G  +        GV+            ++D   + G+ ++A    ++
Sbjct: 660 SVAACANVGSLSLGRALHG-----QGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEK 714

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP--YSLLANIYS 719
           M  K   V W  L+++   +    L   A    + ++ K  +P  YS+ + +++
Sbjct: 715 MGQK-TVVSWTSLIAA---YVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHA 764


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 230/767 (29%), Positives = 379/767 (49%), Gaps = 99/767 (12%)

Query: 19  LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFD 78
           L  D  LC R+I +Y+ C +   ++  FD +  K+++ WNA+                  
Sbjct: 116 LRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAV------------------ 157

Query: 79  EMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKASTALLDVE 137
                        IS+  RN L  + L ++ KM S    +P + T   V KA   + DV 
Sbjct: 158 -------------ISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVG 204

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
            G   HGLV+K GL ++++V NAL+S Y   G+   A+ +F+ M E N V++ +M+   +
Sbjct: 205 IGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFS 264

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFAQSDNKFSRNVHG 256
                             A   D  ++ +VL VCARE   GV                 G
Sbjct: 265 DNGD------------DGAFMPDVATVVTVLPVCAREREIGV-----------------G 295

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           + VH   +KL  + +L ++N+L+DMY+K G +  +++IF     ++VVSWN M+ G+  +
Sbjct: 296 KGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAE 355

Query: 317 YQSTKAIELLQRM--KSCGFEPDEVTSINMLVAC-------------------------- 348
                  +LL++M   S   + DEVT +N +  C                          
Sbjct: 356 GDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDEL 415

Query: 349 ---------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                     + G +   + +F  + S +++SWNA++  Y+QS + + ++    +M+  G
Sbjct: 416 LANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSG 475

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           + PD  T+  +LS+C+ +  L  GK+VH   ++     D +V   ++ +Y  C      +
Sbjct: 476 LLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQ 535

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            +F  + +  +V WN++I G   N     A   F+QM    + P   S  TV  +C+ L 
Sbjct: 536 VLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLP 595

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S   GR+ HA   K    ++ F+  ++I+MY K G I  + + F+ +  K+  +WN MI 
Sbjct: 596 SLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIM 655

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GY  +G   EA++L+++M  +G  PDD+TF+ +LTAC+HSGL+  G+   + M+   G++
Sbjct: 656 GYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLK 715

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P L HY C+ID LGRAG    A  +  EM  + D  IW  LLS CR+H N+ + ++ A +
Sbjct: 716 PNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAK 775

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LF L+P+    Y LL+N+Y+ LG+WDD+R VR+ M E  + KD   S
Sbjct: 776 LFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCS 822



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 164/633 (25%), Positives = 284/633 (44%), Gaps = 75/633 (11%)

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI-KIGLDKNIYVANALLSLYAKCGW 170
           S++ F+     L  + +AS    D+E GR+ H LV     L  +  +   ++++YA CG 
Sbjct: 76  SSDVFLLVREALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGS 135

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLG 229
              +   F+ +   N   + A++S  ++ +   E LEMF  MI K  +  D+ +   V+ 
Sbjct: 136 PDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIK 195

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            CA    G+ SDV             G  VH L +K G   DL + N+L+  Y  +G + 
Sbjct: 196 ACA----GI-SDVGI-----------GLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVS 239

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
            A  +F  +PER++VSWN MI  +                    F PD  T + +L  C 
Sbjct: 240 DALKLFDIMPERNLVSWNSMIRVFSDNGDDG------------AFMPDVATVVTVLPVCA 287

Query: 350 RSGDIKTGRE-----------------------------------MFDSMPSPSVSSWNA 374
           R  +I  G+                                    +F    + +V SWN 
Sbjct: 288 REREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNT 347

Query: 375 MLSSYSQSENHKEAIKLFREM--QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           M+  +S   +      L R+M      VK D  T+   +  C    +L S K++H  SLK
Sbjct: 348 MVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLK 407

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS---LDIEA 489
                D  +A+  +  Y+KC     A+RVFH I    +  WN++I G + +S   L ++A
Sbjct: 408 QEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDA 467

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
            +   QM+ + + P  F+  ++LS+C+KL S   G++VH  I ++    D+FV  +++ +
Sbjct: 468 HL---QMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 524

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y  CG++   +  FD M   + V+WN +I G+ QNG+ + A+ L++ M+  G++P  I+ 
Sbjct: 525 YIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISM 584

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           + +  ACS    + +G E  ++  L H +E        +ID   + G   ++  + + + 
Sbjct: 585 MTVFGACSLLPSLRLGREA-HAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLK 643

Query: 670 CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
            K     W  ++    +H   + A +  EE+ R
Sbjct: 644 EK-SAASWNAMIMGYGMHGRAKEAIKLFEEMQR 675



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/611 (22%), Positives = 268/611 (43%), Gaps = 98/611 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +++ GL +D F+ N L+  Y        A  LFD MP +++ SWN+++     
Sbjct: 206 GLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMI----- 260

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++F +                  NG             +  F+P   T+ +V
Sbjct: 261 --------RVFSD------------------NG------------DDGAFMPDVATVVTV 282

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                   ++  G+  HG  +K+ LDK + V NAL+ +Y+K G    +  +F+  +  N 
Sbjct: 283 LPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNV 342

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKA--VSIDSVSLSSVLGVCAREGCGVESDVFA 244
           V++  M+ G +    +    ++ R M+  +  V  D V++ + + VC  E          
Sbjct: 343 VSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDE---------- 392

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 S     +++HC ++K  F  D  L+N+ +  YAK G +  A+ +F  +  +++ 
Sbjct: 393 ------SVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLN 446

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----- 359
           SWN +I GY Q      +++   +MK+ G  PD  T  ++L AC +   ++ G+E     
Sbjct: 447 SWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFI 506

Query: 360 ------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                         +FD+M   S+ SWN +++ + Q+   + A+
Sbjct: 507 IRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERAL 566

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LFR+M   G++P   ++  +  +C+ +  L  G++ HA +LK     + ++A  +I +Y
Sbjct: 567 GLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMY 626

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +K      + +VF+ + E     WN+MI G  ++    EA   F++M++    P   +F 
Sbjct: 627 AKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFL 686

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGA-RQFFDMMH 567
            VL++C       +G +   Q++   G   ++   + +I+M  + G +  A R   +M  
Sbjct: 687 GVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSE 746

Query: 568 GKNTVTWNEMI 578
             +   WN ++
Sbjct: 747 EPDVGIWNSLL 757



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 220/491 (44%), Gaps = 62/491 (12%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LH + L+     D  L N  +  Y+KC +   AQ +F  +  K + SWNA++    +S
Sbjct: 399 KELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQS 458

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            D                                  +L  + +M N G +P + T+ S+ 
Sbjct: 459 SDPRL-------------------------------SLDAHLQMKNSGLLPDNFTVCSLL 487

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A + L  +  G+  HG +I+  L+++++V  ++LSLY  CG       +F+ M + + V
Sbjct: 488 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLV 547

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++  +++G  +      AL +FR M+   +    +S+ +V G C+               
Sbjct: 548 SWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSL-------------- 593

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G++ H   +K   E +  ++ S++DMYAKNG +  +  +F+ L E+S  SWN
Sbjct: 594 --LPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWN 651

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS- 366
            MI GYG   ++ +AI+L + M+  G  PD++T + +L AC  SG +  G    D M S 
Sbjct: 652 AMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSS 711

Query: 367 ----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
               P++  +  ++    ++     A+++  EM     +PD      +LS C     LE 
Sbjct: 712 FGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMS---EEPDVGIWNSLLSWCRIHQNLEM 768

Query: 423 GKQVHAA-SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           G++V A   +      +NYV   L  +Y+   + +   +V  R+ E+ +       AG S
Sbjct: 769 GEKVAAKLFVLEPEKPENYVL--LSNLYAGLGKWDDVRQVRQRMKEMSL----RKDAGCS 822

Query: 482 LNSLDIEAFMF 492
              L+ + F F
Sbjct: 823 WIELNGKVFSF 833


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/656 (31%), Positives = 335/656 (51%), Gaps = 51/656 (7%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T   +F+  T L D   G++    +I+ G   NIY  N L+ LY+ CG    A  +F+ +
Sbjct: 59  TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
                VT+ A+++G A+   V EA  +FR M+ + +    ++  SVL  C+    G+   
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSP-AGLN-- 175

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                         G++VH   +  GF +D  +  +L+ MY K G MD A  +F  L  R
Sbjct: 176 -------------WGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIR 222

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
            V ++NVM+ GY +     KA EL  RM+  G +P++++ +++L  C             
Sbjct: 223 DVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVH 282

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                    G I+  R +FD+M    V SW  M+  Y+++ N +
Sbjct: 283 AQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIE 342

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           +A  LF  MQ  G++PDR T   I+++CA    L   +++H+         D  V++ L+
Sbjct: 343 DAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALV 402

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y+KC   + A +VF  +P  D+V W++MI     N    EAF  F  M+++ + P   
Sbjct: 403 HMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGV 462

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++  +L++C  L +   G +++ Q  K   V+ + +G+ALI M  K G +  AR  FD M
Sbjct: 463 TYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTM 522

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++ +TWN MI GY+ +G   EA+ L+  M+    +P+ +TFV +L+ACS +G VD G 
Sbjct: 523 VRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGR 582

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
             F  +    G+ P +  Y CM+D LGRAG   EAE+LI  MP K    IW  LL +CR+
Sbjct: 583 RFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRI 642

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           H N+ +A+RAAE    +DP + A Y  L+++Y++ G W+++  VR++M    I K+
Sbjct: 643 HGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKE 698



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 167/656 (25%), Positives = 286/656 (43%), Gaps = 121/656 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +  HI++ G   + +  N LI+LYS C N   A+                       
Sbjct: 76  GKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEAR----------------------- 112

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++FD +  + VV+WN LI+   + G  ++A +++ +M +EG  P+ IT  SV
Sbjct: 113 --------QIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSV 164

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++   +  G+  H  V+  G   +  +  AL+S+Y K G    A  VF+ +   + 
Sbjct: 165 LDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDV 224

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            TF  M+ G AK+    +A E+F  M +  +  + +S  S+L     +GC     +    
Sbjct: 225 STFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSIL-----DGCWTPEAL---- 275

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ VH   +  G   D+ ++ SL+ MY   G ++ A  +F N+  R VVSW
Sbjct: 276 -------AWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSW 328

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
            VMI GY +      A  L   M+  G +PD +T ++++ AC                  
Sbjct: 329 TVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDI 388

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G IK  R++FD+MP   V SW+AM+ +Y ++    EA + 
Sbjct: 389 AGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFET 448

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT--ASHIDNYVASGLIGIY 449
           F  M+   ++PD  T   +L++C  +G L+ G +++  ++K    SH+   + + LI + 
Sbjct: 449 FHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVP--LGNALIIMN 506

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +K    E A  +F  +   D++ WN+MI G SL+    EA   F +M +    P   +F 
Sbjct: 507 AKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFV 566

Query: 510 TVLSSCAKLSSSFQGRQVHAQ-IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
            VLS+C++     +GR+     +E  G V  + +   ++++  + G++            
Sbjct: 567 GVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGEL------------ 614

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
                              DEA  L K M    VKP    + ++L AC   G +DV
Sbjct: 615 -------------------DEAELLIKSM---PVKPTSSIWSSLLVACRIHGNLDV 648



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 187/424 (44%), Gaps = 55/424 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA  +  GL DD  +   LI +Y+ C +                            
Sbjct: 278 GKAVHAQCMNAGLVDDIRVATSLIRMYTTCGS---------------------------- 309

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A ++FD M  R+VVSW  +I     NG  E A  ++  M  EG  P  IT   +
Sbjct: 310 ---IEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHI 366

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A     ++ H R  H  V   G   ++ V+ AL+ +YAKCG  K A  VF+ M   + 
Sbjct: 367 MNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDV 426

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++AM+    +     EA E F LM R  +  D V+  ++L  C   G     DV    
Sbjct: 427 VSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGA---LDV---- 479

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G +++   IK    + + L N+L+ M AK+G ++ A  IF  +  R V++W
Sbjct: 480 ---------GMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITW 530

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N MI GY     + +A+ L  RM    F P+ VT + +L AC R+G +  GR  F  +  
Sbjct: 531 NAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLE 590

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P+V  +  M+    ++    EA  L + M    VKP  +  + +L +C   G L+
Sbjct: 591 GRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMP---VKPTSSIWSSLLVACRIHGNLD 647

Query: 422 SGKQ 425
             ++
Sbjct: 648 VAER 651



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 201/438 (45%), Gaps = 52/438 (11%)

Query: 340 TSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           T I   +A VR       R  F S+  P  S+     S++++     + ++   E    G
Sbjct: 5   TRIAANIAVVR-------RRWFGSLQLPVPSA--RFRSTFTRRVGANDVLQRLGE---GG 52

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
              D  T   +   C  +     GKQV    ++    ++ Y  + LI +YS C     A 
Sbjct: 53  NHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEAR 112

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           ++F  +    +V WN++IAG +      EAF  F+QM    + P+  +F +VL +C+  +
Sbjct: 113 QIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPA 172

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
               G++VHAQ+   G+V+D  +G+AL+ MY K G +  ARQ FD +H ++  T+N M+ 
Sbjct: 173 GLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVG 232

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA----------------CSHSGLVD 623
           GYA++G  ++A  L+  M   G+KP+ I+F++IL                  C ++GLVD
Sbjct: 233 GYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVD 292

Query: 624 ------VGVEIFNSMQLDHGVEPILDH--------YTCMIDCLGRAGHFHEAEML---ID 666
                   + ++ +     G   + D+        +T MI+     G+  +A  L   + 
Sbjct: 293 DIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQ 352

Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL----FRLDPKNSAPYSLLANIYSSLG 722
           E   + D + +  ++++C + AN+  A+    ++    F  D   S   + L ++Y+  G
Sbjct: 353 EEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVS---TALVHMYAKCG 409

Query: 723 RWDDLRAVRELMSENCIV 740
              D R V + M    +V
Sbjct: 410 AIKDARQVFDAMPRRDVV 427


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/622 (34%), Positives = 334/622 (53%), Gaps = 76/622 (12%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH------AVPVFEEMSEPNEVTFTAMM 193
           R  H  +IK GL    Y  + L+     C  + H      A+ VFE + EPN + +  M 
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEF---CVLSPHFDGLPYAISVFETIQEPNLLIWNTMF 60

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            G A +   V AL ++  MI   +  +  +   +L  CA+      S  F +        
Sbjct: 61  RGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK------SKAFRE-------- 106

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             GQQ+H   +KLG++ DL++  SL+ MY +NG ++ A  +F     R VVS+  +I GY
Sbjct: 107 --GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGY 164

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
             K                                   G I + ++MFD +P   V SWN
Sbjct: 165 ASK-----------------------------------GYIASAQKMFDEIPIKDVVSWN 189

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           AM+S Y+++ N+KEA++LF+EM    V+PD +T+  ++S+CA    +E G+QVH      
Sbjct: 190 AMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH------ 243

Query: 434 ASHIDNY-------VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
            S ID++       + + LI +Y KC   E A  +F  +   D++ WN++I G +  +L 
Sbjct: 244 -SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 302

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK--DGYVNDIFVGS 544
            EA + F++M ++   P   +  ++L +CA L +   GR +H  I K   G  N     +
Sbjct: 303 KEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRT 362

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
           +LI+MY KCGDI  A+Q FD +  ++  +WN MI G+A +G  + A  ++  M  + ++P
Sbjct: 363 SLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEP 422

Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEML 664
           DDITFV +L+ACSHSG++D+G  IF SM+ D+ + P L+HY CMID LG +G F EAE +
Sbjct: 423 DDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 482

Query: 665 IDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRW 724
           I+ M  + D VIW  LL +C++H NV L +  A+ L +++PKN   Y LL+NIY++ GRW
Sbjct: 483 INTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRW 542

Query: 725 DDLRAVRELMSENCIVKDPAYS 746
           +++  +R L+++  + K P  S
Sbjct: 543 NEVAKIRALLNDKGMKKVPGCS 564



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 229/465 (49%), Gaps = 26/465 (5%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H H+L+ G   D ++   LI +Y +      A+ +FD+  H+D+ S+ A++
Sbjct: 102 KAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALI 161

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +       +  A K+FDE+P ++VVSWN +IS     G  ++AL ++ +M      P   
Sbjct: 162 TGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDES 221

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ SV  A      +E GR+ H  +   G   N+ + NAL+ LY KCG  + A  +FE +
Sbjct: 222 TMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGL 281

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S  + +++  ++ G    +   EAL +F+ M+R   S + V++ S+L  CA  G      
Sbjct: 282 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGR 341

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                 NK  + V     H                SL+DMYAK GD+++A+ +F ++  R
Sbjct: 342 WIHVYINKRLKGVANASSH--------------RTSLIDMYAKCGDIEAAQQVFDSILNR 387

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
           S+ SWN MI G+    ++  A ++  RM+    EPD++T + +L AC  SG +  GR +F
Sbjct: 388 SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIF 447

Query: 362 DSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            SM      +P +  +  M+     S   KEA ++   M+   ++PD      +L +C  
Sbjct: 448 RSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKM 504

Query: 417 MGILESGKQVHAASLKT-ASHIDNYVASGLIGIYSKCQR-NELAE 459
            G +E G+      +K    +  +YV   L  IY+   R NE+A+
Sbjct: 505 HGNVELGESYAQNLIKIEPKNPGSYVL--LSNIYATAGRWNEVAK 547



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 217/487 (44%), Gaps = 112/487 (22%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           +++HA +++ GL +  +  ++LIE                            +LS     
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEF--------------------------CVLSPHF-- 35

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D L +A  +F+ + E N++ WN +      +     AL +Y  M + G +P   T   + 
Sbjct: 36  DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLL 95

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K+         G++ HG V+K+G D ++YV  +L+S+Y + G  + A  VF++ S  + V
Sbjct: 96  KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 155

Query: 188 TFT-------------------------------AMMSGLAKTDRVVEALEMFRLMIRKA 216
           ++T                               AM+SG A+T    EALE+F+ M++  
Sbjct: 156 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 215

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  ++ SV+  CA +   +E                G+QVH      GF ++L + N
Sbjct: 216 VRPDESTMVSVVSACA-QSASIEL---------------GRQVHSWIDDHGFGSNLKIVN 259

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D+Y K G++++A  +F  L  + V+SWN +I GY       +A+ L Q M   G  P
Sbjct: 260 ALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESP 319

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           ++VT +++L AC                                      + GDI+  ++
Sbjct: 320 NDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQ 379

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +FDS+ + S+SSWNAM+  ++       A  +F  M+   ++PD  T   +LS+C+  G+
Sbjct: 380 VFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGM 439

Query: 420 LESGKQV 426
           L+ G+ +
Sbjct: 440 LDLGRHI 446


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/615 (33%), Positives = 331/615 (53%), Gaps = 62/615 (10%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH------AVPVFEEMSEPNEVTFTAMM 193
           R  H  +IK GL    Y   AL  L   C  + H      A+ VF+ + EP  + +  M 
Sbjct: 19  RIIHAQMIKTGLHNTNY---ALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMF 75

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            G A +   V AL+++  M+   +  +S +   +L  CA+      S  F +        
Sbjct: 76  RGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK------SXAFKE-------- 121

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             GQQ+H   +K GF+ DL++  SL+ MY +NG ++ A+ +      R VVS+  +I GY
Sbjct: 122 --GQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGY 179

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
             +                                   G I++  +MFD +P   V SWN
Sbjct: 180 ASR-----------------------------------GXIESAHKMFDEIPVKDVVSWN 204

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           A +S Y+++ N+KEA++LF++M    V+PD +T+  +LS+CA  G +E G+QVH+     
Sbjct: 205 AXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDH 264

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               +  + + LI +YSKC   E A  +F  +   D++ WN++I G +  +L  EA + F
Sbjct: 265 GFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLF 324

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK--DGYVNDIFVGSALIEMYC 551
           + M ++   P   +  ++LS+CA L +   GR +H  I+K   G  N   + ++LI+MY 
Sbjct: 325 QDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 384

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCGDI  A+Q FD M  ++  +WN MI G+A +G  + A  ++  M  +G++PDDITFV 
Sbjct: 385 KCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVG 444

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +L+ACSHSG++D+G  IF SM  D+ + P L+HY CMID  G +G F EAE +I+ M  +
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEME 504

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
            D VIW  LL +C++H NV L +  A+ L +++P+N   Y LL+NIY++  RW+++   R
Sbjct: 505 PDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTR 564

Query: 732 ELMSENCIVKDPAYS 746
            L+++  + K P  S
Sbjct: 565 ALLNDKGMKKVPGCS 579



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 231/462 (50%), Gaps = 30/462 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  +L+ G   D ++   LI +Y +      AQ + DK  H+D+ S+ A+++    
Sbjct: 122 GQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYAS 181

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A+K+FDE+P ++VVSWN  IS     G  ++AL ++ KM      P   T+ +V
Sbjct: 182 RGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTV 241

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      +E GR+ H  +   G   N+ + NAL+ LY+KCG  + A  +F+ +S  + 
Sbjct: 242 LSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDV 301

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++  ++ G    +   EAL +F+ M+R     + V++ S+L  CA  G     D+    
Sbjct: 302 ISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGA---IDI---- 354

Query: 247 DNKFSRNVHGQQVHCLTIKL--GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                    G+ +H    K   G      L  SL+DMYAK GD+++A+ +F ++  RS+ 
Sbjct: 355 ---------GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SWN MI G+    ++  A ++  RM+  G EPD++T + +L AC  SG +  GR +F SM
Sbjct: 406 SWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465

Query: 365 PS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                  P +  +  M+     S   KEA K+   M+   ++PD      +L +C   G 
Sbjct: 466 TRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTME---MEPDGVIWCSLLKACKMHGN 522

Query: 420 LESGKQVHAASLKT-ASHIDNYVASGLIGIYSKCQR-NELAE 459
           +E G+      +K    +  +YV   L  IY+  +R NE+A+
Sbjct: 523 VELGESYAQNLIKIEPENPGSYVL--LSNIYATAERWNEVAK 562



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 217/487 (44%), Gaps = 112/487 (22%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           +++HA +++ GL +  +  ++L+E                            +LS     
Sbjct: 19  RIIHAQMIKTGLHNTNYALSKLLE--------------------------XCVLSPHF-- 50

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D L +A  +FD + E  ++ WN +      +     AL +Y  M + G +P   T   + 
Sbjct: 51  DGLPYAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLL 110

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV---------- 177
           K+       + G++ HG V+K G D ++Y+  +L+S+Y + G  + A  V          
Sbjct: 111 KSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVV 170

Query: 178 ---------------------FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
                                F+E+   + V++ A +SG A+T    EALE+F+ M++  
Sbjct: 171 SYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTN 230

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  ++ +VL  CA+ G  +E                G+QVH      GF  +L + N
Sbjct: 231 VRPDESTMVTVLSACAQSG-SIEL---------------GRQVHSWINDHGFGXNLKIVN 274

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D+Y+K G++++A  +F  L  + V+SWN +I GY       +A+ L Q M   G +P
Sbjct: 275 ALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKP 334

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           ++VT +++L AC                                      + GDI+  ++
Sbjct: 335 NDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQ 394

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +FDSM + S+SSWNAM+  ++       A  +F  M+  G++PD  T   +LS+C+  G+
Sbjct: 395 VFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGM 454

Query: 420 LESGKQV 426
           L+ G+ +
Sbjct: 455 LDLGRHI 461



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 36/296 (12%)

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIG---IYSKCQRNELAERVFHRIPELDIVCWNSM 476
           L+S + +HA  +KT  H  NY  S L+    +         A  VF  I E  ++ WN+M
Sbjct: 15  LQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTM 74

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
             G +L+S  + A   +  M    + P  ++F  +L SCAK  +  +G+Q+H Q+ K G+
Sbjct: 75  FRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGF 134

Query: 537 VNDIFVGSALIEMYCKC-------------------------------GDIYGARQFFDM 565
             D+++ ++LI MY +                                G I  A + FD 
Sbjct: 135 DLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDE 194

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  K+ V+WN  I GYA+ G   EA+ L+K M+ + V+PD+ T V +L+AC+ SG +++G
Sbjct: 195 IPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELG 254

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            ++ + +  DHG    L     +ID   + G    A  L   +  K D + W  L+
Sbjct: 255 RQVHSWIN-DHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNK-DVISWNTLI 308


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/680 (32%), Positives = 349/680 (51%), Gaps = 61/680 (8%)

Query: 108 YNKMSNEGFVPTHITLASVFKASTALL-----DVEHGRRCHGLVIKIGLDKNIYVANALL 162
           ++ +S    +P+H     V+K   A+L      ++   +   LVIK GL         L+
Sbjct: 34  FHTLSERAHIPSH-----VYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLV 88

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
           SL++K G    A  VFE + +  +  +  M+ G AK   +  AL     M    V     
Sbjct: 89  SLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVY 148

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
           + + +L VC              +D K  + +HGQ      I   F A++     +++MY
Sbjct: 149 NFTYLLKVCGD-----------NADLKRGKEIHGQ-----LITNSFAANVFAMTGVVNMY 192

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           AK   +D A  +F  +PER +VSWN +IAG+ Q   + KA+EL+ RM+  G  PD +T +
Sbjct: 193 AKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLV 252

Query: 343 NMLVACV-----------------------------------RSGDIKTGREMFDSMPSP 367
            +L A                                     + G ++T R +FD M   
Sbjct: 253 TVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQK 312

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +V SWN+M+  Y Q+   ++AI +F +M   G+ P   T+   L +CA +G LE GK VH
Sbjct: 313 TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVH 372

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
               +     D  V + LI +YSKC+R ++A  +F+ +     V WN+MI G + N    
Sbjct: 373 KFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVS 432

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           EA   F +M+   M P  F+  +V+ + A+LS +   + +H  I +     +IFV +AL+
Sbjct: 433 EALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALV 492

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
           +MY KCG I+ AR+ FDM+  ++ +TWN MI GY  +G G  A+ L+  M    V+P+DI
Sbjct: 493 DMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDI 552

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           T++++++ACSHSGLVD G+  F SM+ D+G+EP +DHY  M+D LGRAG   EA   I+ 
Sbjct: 553 TYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIEN 612

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
           MP      ++     +C++H N+ + ++AA++LF L+P     + LLANIY+S  +W  +
Sbjct: 613 MPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKV 672

Query: 728 RAVRELMSENCIVKDPAYSL 747
             VR+ M +  + K P  S+
Sbjct: 673 AEVRKTMEKKGLKKTPGCSV 692



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/589 (23%), Positives = 269/589 (45%), Gaps = 83/589 (14%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           +++NGL+++     +L+ L+SK  + + A  +F+ +                  D L+  
Sbjct: 72  VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPI-----------------DDKLDAL 114

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
           Y              + ++    +N   E AL+   +M  +   P       + K     
Sbjct: 115 Y--------------HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDN 160

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
            D++ G+  HG +I      N++    ++++YAKC     A  +F+ M E + V++  ++
Sbjct: 161 ADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTII 220

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           +G ++     +ALE+   M  +    DS++L +VL   A  G  +               
Sbjct: 221 AGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV-------------- 266

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+ +H   I+ GF   +++S +L DMY+K G +++A +IF  + +++VVSWN M+ GY
Sbjct: 267 --GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGY 324

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--------------- 358
            Q  +  KAI + ++M   G +P  VT +  L AC   GD++ G+               
Sbjct: 325 VQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDI 384

Query: 359 --------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                               ++F+++   +  SWNAM+  Y+Q+    EA+  F EM+  
Sbjct: 385 SVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSL 444

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G+KPD  T+  ++ + A + +    K +H   +++    + +V + L+ +YSKC    +A
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            ++F  I +  ++ WN+MI G   + L   A   F +M++  + P   ++ +V+S+C+  
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS 564

Query: 519 SSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
               +G +    +++D G    +    A++++  + G I  A  F + M
Sbjct: 565 GLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENM 613



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 214/461 (46%), Gaps = 83/461 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++ N    + F    ++ +Y+KC                              
Sbjct: 166 GKEIHGQLITNSFAANVFAMTGVVNMYAKCRQI--------------------------- 198

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            DD   AYK+FD MPER++VSWN +I+   +NG  +KAL +  +M +EG  P  ITL +V
Sbjct: 199 -DD---AYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTV 254

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A+  +  +  G+  HG  I+ G  K + ++ AL  +Y+KCG  + A  +F+ M +   
Sbjct: 255 LPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTV 314

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +MM G  +     +A+ +F  M+ + +    V++   L  CA  G           
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG----------- 363

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                R   G+ VH    +L   +D+ + NSL+ MY+K   +D A  IF+NL  R+ VSW
Sbjct: 364 --DLER---GKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----------------CVR 350
           N MI GY Q  + ++A+     MKS G +PD  T ++++ A                 +R
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478

Query: 351 S-------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
           S                   G I   R++FD +    V +WNAM+  Y      + A+ L
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDL 538

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           F +M+   V+P+  T   ++S+C+  G+++ G + H  S+K
Sbjct: 539 FDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMK 578



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 199/426 (46%), Gaps = 55/426 (12%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GK +H + +R G      +   L ++YSKC +                          
Sbjct: 265 MVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS-------------------------- 298

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                +E A  +FD M ++ VVSWN+++   V+NG  EKA++V+ KM  EG  PT +T+ 
Sbjct: 299 -----VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIM 353

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
               A   L D+E G+  H  V ++ L  +I V N+L+S+Y+KC     A  +F  ++  
Sbjct: 354 EALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR 413

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
             V++ AM+ G A+  RV EAL  F  M    +  DS ++ SV+   A            
Sbjct: 414 THVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALA------------ 461

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
               + S   H + +H L I+   + ++ ++ +L+DMY+K G +  A  +F  + +R V+
Sbjct: 462 ----ELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVI 517

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           +WN MI GYG       A++L  +MK    EP+++T ++++ AC  SG +  G   F SM
Sbjct: 518 TWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSM 577

Query: 365 PS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                  PS+  + AM+    ++   KEA      M    + P  T       +C     
Sbjct: 578 KQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP---ISPGITVYGAXXGACKIHKN 634

Query: 420 LESGKQ 425
           +E G++
Sbjct: 635 IEVGEK 640


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/574 (34%), Positives = 327/574 (56%), Gaps = 56/574 (9%)

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +A+ VFE + EPN++ +  M  G A +   V AL+++ +MI   +  +  +   +L  CA
Sbjct: 27  YAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCA 86

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
           +      S  F +          GQQ+H   +KLGF+ DL++  SL+ MYA+NG ++ A+
Sbjct: 87  K------SKTFKE----------GQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQ 130

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F     R VVS+  +I GY  +                                   G
Sbjct: 131 KVFDRSSHRDVVSYTALITGYASR-----------------------------------G 155

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            I++ ++MFD +P   V SWNAM+S Y+++ N+K+A++LF+EM    VKPD +T+A ++S
Sbjct: 156 YIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVS 215

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +CA  G +E G+QVH+         +  + + LI +YSKC   E A  +   +   D++ 
Sbjct: 216 ACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVIS 275

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           WN++I G +  +L  EA + F++M ++   P   +  ++L +CA L +   GR +H  I+
Sbjct: 276 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 335

Query: 533 KD--GYV--NDIFVGSALIEMYCKCGDIYGARQFFDM-MHGKNTVTWNEMIHGYAQNGYG 587
           K   G V  N   + ++LI+MY KCGDI  A Q  D     ++  TWN MI G+A +G  
Sbjct: 336 KKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRA 395

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
           + A  ++  M  +G++PDDITFV +L+ACSHSG++D+G  IF SM+ D+ + P L+HY C
Sbjct: 396 NAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGC 455

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
           MID LG +G F EAE +I+ MP + D VIW  LL +C++H N+ L +  A++L +++P+N
Sbjct: 456 MIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPEN 515

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
              Y LL+NIY++ G+W+++  +R L+++  + K
Sbjct: 516 PGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKK 549



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 217/429 (50%), Gaps = 21/429 (4%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K    G+ +H H+L+ G   D ++   LI +Y++      AQ +FD+  H+D+ S+ A++
Sbjct: 89  KTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALI 148

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +       +E A K+FDE+P ++VVSWN +IS     G  +KAL ++ +M      P   
Sbjct: 149 TGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDES 208

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+A+V  A      +E GR+ H  +   G   N+ + NAL+ LY+KCG  + A  + E +
Sbjct: 209 TMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGL 268

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S  + +++  ++ G    +   EAL +F+ M+R   + + V++ S+L  CA  G     D
Sbjct: 269 SNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA---ID 325

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA-EVIFSNLPE 300
           +         + + G  V   +          L  SL+DMYAK GD+D+A +V  S+   
Sbjct: 326 IGRWIHVYIDKKLKGVVVTNAS---------SLRTSLIDMYAKCGDIDAAPQVSDSSAFN 376

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           RS+ +WN MI G+    ++  A ++  RM+  G EPD++T + +L AC  SG +  GR +
Sbjct: 377 RSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI 436

Query: 361 FDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
           F SM      +P +  +  M+     S   KEA ++   M    ++PD      +L +C 
Sbjct: 437 FRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMP---MEPDGVIWCSLLKACK 493

Query: 416 AMGILESGK 424
             G LE G+
Sbjct: 494 IHGNLELGE 502



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 221/485 (45%), Gaps = 93/485 (19%)

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D L +A  +F+ +PE N + WN +      +     AL +Y  M + G +P   T   + 
Sbjct: 23  DGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLL 82

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K+       + G++ HG V+K+G D ++YV  +L+S+YA+ G  + A  VF+  S  + V
Sbjct: 83  KSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVV 142

Query: 188 TFT-------------------------------AMMSGLAKTDRVVEALEMFRLMIRKA 216
           ++T                               AM+SG A+T    +ALE+F+ M++  
Sbjct: 143 SYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN 202

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  ++++V+  CA+ G  +E                G+QVH      GF ++L + N
Sbjct: 203 VKPDESTMATVVSACAQSG-SIEL---------------GRQVHSWINDHGFGSNLKIVN 246

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D+Y+K G++++A  +   L  + V+SWN +I GY       +A+ L Q M   G  P
Sbjct: 247 ALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 306

Query: 337 DEVTSINMLVACVRSGDIKTGR--------------------------EMF------DSM 364
           ++VT +++L AC   G I  GR                          +M+      D+ 
Sbjct: 307 NDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAA 366

Query: 365 P--------SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           P        + S+S+WNAM+  ++       A  +F  M+  G++PD  T   +LS+C+ 
Sbjct: 367 PQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSH 426

Query: 417 MGILESGKQVHAA---SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVC 472
            G+L+ G+ +  +          +++Y    +I +       + AE + + +P E D V 
Sbjct: 427 SGMLDLGRNIFRSMRQDYNITPKLEHY--GCMIDLLGHSGLFKEAEEMINTMPMEPDGVI 484

Query: 473 WNSMI 477
           W S++
Sbjct: 485 WCSLL 489


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 217/632 (34%), Positives = 341/632 (53%), Gaps = 60/632 (9%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEM----SEPNEVTFTAMMSGLAKTDRVVEALEMFRL--- 211
           +AL+S Y + G  + A+  + EM    ++ NE TF++++ G + T  +    ++ R+   
Sbjct: 117 SALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALV 176

Query: 212 --MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
             MI   +S +  SLS+VL  CA    G+E + +            G +VH   IKLG++
Sbjct: 177 TEMISTGISPNEFSLSTVLNACA----GLEDENY------------GMKVHGYLIKLGYD 220

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           +D   +N+LLDMYAK+G  ++A  +F  +P+  +VSWN +IAG     ++  A++LL +M
Sbjct: 221 SDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKM 280

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREM----------------------------- 360
            S    P   T  + L AC   G +K GR++                             
Sbjct: 281 GSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLL 340

Query: 361 ------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                 FD MP   V  WN+++S YS      EA+ LF  M   G++ ++TTL+ IL S 
Sbjct: 341 QDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKST 400

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           A        +QVH  S+K+    D YVA+ L+  Y KC   E A +VF   P  D+V + 
Sbjct: 401 AGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYT 460

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           SMI   S   L  EA   + +M+  ++ P  F F+++ ++CA LS+  QG+Q+H  + K 
Sbjct: 461 SMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKC 520

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G ++D+F G++L+ MY KCG I  A   F+ +  +  V+W+ MI G AQ+G+G +A++L+
Sbjct: 521 GLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLF 580

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
             M+ +G+ P+ IT V++L+AC+H+GLV      F  M+   G+ P  +HY CM+D LGR
Sbjct: 581 YQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGR 640

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
            G   EA +L+ EMP +    +W  LL + R+H N+ L + AAE L  L+P+ S  + LL
Sbjct: 641 VGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILL 700

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ANIY+S G WD++  VR  M  + + K+P  S
Sbjct: 701 ANIYASTGMWDNVAKVRRSMKNSLVKKEPGMS 732



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 263/548 (47%), Gaps = 60/548 (10%)

Query: 30  IELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEM----PERNV 85
           + LYSKC     A+ L       D+ SW+A++S   ++   E A   + EM     + N 
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 86  VSWNNLIS--ALVRN---GLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
            ++++++   +L RN   G +   +++  +M + G  P   +L++V  A   L D  +G 
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           + HG +IK+G D + + ANALL +YAK G  + A+ VF E+ +P+ V++ A+++G    +
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
           +   AL++   M    V+    +LSS L  CA  G                    G+Q+H
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGL----------------VKLGRQLH 312

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
              +K+  E D  +   L+DMY+K G +  A ++F  +P + V+ WN +I+GY       
Sbjct: 313 SALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDI 372

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGDIKTGRE---------- 359
           +A+ L   M   G E ++ T   +L +            V +  IK+G +          
Sbjct: 373 EAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLL 432

Query: 360 --------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                         +F+  P+  + ++ +M+++YSQ    +EA+K++  MQ R +KPD  
Sbjct: 433 DSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAF 492

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
             + + ++CA +   E GKQ+H   LK     D +  + L+ +Y+KC   + A  +F+ I
Sbjct: 493 IFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEI 552

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
               IV W++MI GL+ +    +A   F QM +N + P   +  +VLS+C       + R
Sbjct: 553 SWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEAR 612

Query: 526 QVHAQIEK 533
           +    +EK
Sbjct: 613 RFFGLMEK 620



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 216/445 (48%), Gaps = 38/445 (8%)

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +++Y+K      A  +  +  E  +VSW+ +I+GY Q  +  +A+     M   G + +E
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 339 VTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
            T  ++L  C  + +++ G+++                        H+  + L  EM   
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQI------------------------HR--VALVTEMIST 182

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G+ P+  +L+ +L++CA +     G +VH   +K     D + A+ L+ +Y+K    E A
Sbjct: 183 GISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAA 242

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
             VF+ IP+ DIV WN++IAG  L+  +  A     +M    + P+ F+ ++ L +CA +
Sbjct: 243 IAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAI 302

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
                GRQ+H+ + K     D FVG  LI+MY KCG +  AR  FD+M  K+ + WN +I
Sbjct: 303 GLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSII 362

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GY+  GY  EA+ L+ +M   G++ +  T   IL + + S   +   E  +++ +  G 
Sbjct: 363 SGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQ-ANGFCEQVHTISIKSGY 421

Query: 639 EPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA 696
           +   D Y    ++D  G+     +A  + +  P  +D V +  ++++   ++   L + A
Sbjct: 422 Q--YDGYVANSLLDSYGKCCLLEDAAKVFEVCPA-EDLVAYTSMITA---YSQYGLGEEA 475

Query: 697 AEELFRLDPKNSAPYSLLANIYSSL 721
            +   R+  ++  P +    I+SSL
Sbjct: 476 LKMYLRMQDRDIKPDAF---IFSSL 497



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 130/262 (49%), Gaps = 18/262 (6%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D Y  N++L +  K   LE A K+F+  P  ++V++ ++I+A  + GL E+AL +Y +M 
Sbjct: 424 DGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQ 483

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           +    P     +S+F A   L   E G++ H  V+K GL  +++  N+L+++YAKCG   
Sbjct: 484 DRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSID 543

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +F E+S    V+++AM+ GLA+     +AL++F  M++  +  + ++L SVL  C 
Sbjct: 544 DASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACN 603

Query: 233 REGCGVES-DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
             G   E+   F   +  F      +   C                ++D+  + G +D A
Sbjct: 604 HAGLVTEARRFFGLMEKLFGITPTQEHYAC----------------MVDILGRVGRLDEA 647

Query: 292 EVIFSNLP-ERSVVSWNVMIAG 312
            V+   +P + S   W  ++  
Sbjct: 648 MVLVKEMPFQASAAVWGALLGA 669



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 32/203 (15%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A+  GK +H H+L+ GL  D F  N L+ +Y+KC +   A  +F+++      SW  I+S
Sbjct: 506 AYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEI------SWRGIVS 559

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                    W+ +I  L ++G   KAL ++ +M   G +P HIT
Sbjct: 560 -------------------------WSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHIT 594

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           L SV  A      V   RR  GL+ K+ G+         ++ +  + G    A+ + +EM
Sbjct: 595 LVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEM 654

Query: 182 SEPNEVTFTAMMSGLAKTDRVVE 204
                      + G A+  + +E
Sbjct: 655 PFQASAAVWGALLGAARIHKNIE 677


>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 694

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 228/724 (31%), Positives = 384/724 (53%), Gaps = 47/724 (6%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
            +  N+ +   ++     +A+ LFD MP ++  S+NA+LSA  +   +  A +LFDE+P 
Sbjct: 11  VYRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPR 70

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKASTALLDVEHGRR 141
           RN VSWN +I+A   +G    A  +++ M + +GF  T + ++   +A    L  +   R
Sbjct: 71  RNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSWT-LMVSCYARAGELGLARDALDR 129

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
             G       DK     NA++S YAK G    AV +  EM  P+ +++ +++ GL +   
Sbjct: 130 MPG-------DKCTACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGE 182

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFAQSDNKFSRNVHGQQVH 260
           +V A++ F  M  +    D VS + +L    R G     + +FA      S NV    V 
Sbjct: 183 MVRAVKFFDEMPAR----DMVSWNLMLEGYVRAGDVDSAAGLFAGVP---SPNV----VS 231

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            +T              LL+ Y + G +  A  +F  +P+R+V +WNVM++GY +     
Sbjct: 232 WVT--------------LLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHME 277

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
           +A +L   M     + + ++   M+ A VR G ++  +++ D MP  S ++  A++  Y 
Sbjct: 278 EAYKLFTEMP----DKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYL 333

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           QS+   +A  +F  ++ R    D      ++S     G+L+    +     +   + D  
Sbjct: 334 QSKMIDDARLIFDGLEVR----DAVCWNTMISGYVHCGMLDEAMVL----FQQMPNKDMV 385

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
             + +I  Y+   +   A  +F ++ + + V WNS+I+G   N L +EA   F  MR++ 
Sbjct: 386 SWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDA 445

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
                 ++A  LS+CA L++   GRQ H+ + + GY+ D F G+ALI  Y KCG I  AR
Sbjct: 446 KRADWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEAR 505

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           Q FD M   + V+WN +I GYA NG+G EA+ ++++M  + V+PD++TFV +L+ACSH+G
Sbjct: 506 QVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAG 565

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           L+D G + FNSM  D+ + P+ +HY CM+D LGR+G   EA  +I  M  + +  +W  +
Sbjct: 566 LIDEGFDFFNSMTKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAM 625

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           L +CR+H N  LA+ AAE+L+ L+P  ++ Y LL+NI +  G+WD+ + +R  + E  + 
Sbjct: 626 LGACRVHKNHELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVH 685

Query: 741 KDPA 744
           K P 
Sbjct: 686 KTPG 689



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 222/476 (46%), Gaps = 56/476 (11%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSW 88
           L+  Y +      A+ LFD++P +++ +WN +LS   +   +E AYKLF EMP++N +SW
Sbjct: 235 LLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSISW 294

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPT----HITLASVFKASTAL----LDVEHGR 140
             +ISALVR G  ++A  + +KM  + F       H  L S       L    L+V    
Sbjct: 295 TTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAV 354

Query: 141 RCHGLV---IKIGL------------DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             + ++   +  G+            +K++   N +++ YA  G  + AV +F +M++ N
Sbjct: 355 CWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRN 414

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ +++SG  +    VEAL+ F LM R A   D  + +  L  CA        D+ A 
Sbjct: 415 TVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACA--------DLAA- 465

Query: 246 SDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                   +H G+Q H L  + G+  D    N+L+  YAK G +  A  +F  +P   +V
Sbjct: 466 --------LHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIV 517

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SWN +I GY      T+AI + + M+     PDEVT + +L AC  +G I  G + F+SM
Sbjct: 518 SWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSM 577

Query: 365 PS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA--- 416
                  P    +  M+    +S    EA ++ + MQ   V+P+      +L +C     
Sbjct: 578 TKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQ---VQPNAGVWGAMLGACRVHKN 634

Query: 417 --MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ--RNELAERVFHRIPEL 468
             +  L + K       KT++++     +   G + + Q  R  + ER  H+ P L
Sbjct: 635 HELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTPGL 690



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 123/258 (47%), Gaps = 2/258 (0%)

Query: 12  AHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           A ++ +GL   D    N +I  Y  C     A  LF +MP+KD+ SWN +++       +
Sbjct: 341 ARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQM 400

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
             A  +F +M +RN VSWN++IS  V+NGL  +AL  +  M  +       T A    A 
Sbjct: 401 RKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSAC 460

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
             L  +  GR+ H L+ + G   + +  NAL+S YAKCG    A  VF+EM  P+ V++ 
Sbjct: 461 ADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWN 520

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDNK 249
           A++ G A      EA+ +FR M    V  D V+   VL  C+  G   E  D F      
Sbjct: 521 ALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKD 580

Query: 250 FSRNVHGQQVHCLTIKLG 267
           ++     +   C+   LG
Sbjct: 581 YALRPVAEHYACMVDLLG 598



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 5/115 (4%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           HV G+  H+ + R+G   D+F  N LI  Y+KC     A+ +FD+MP  DI SWNA++  
Sbjct: 467 HV-GRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDG 525

Query: 64  QCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE 114
              +     A  +F EM + +V    V++  ++SA    GL ++    +N M+ +
Sbjct: 526 YASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKD 580


>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 226/717 (31%), Positives = 364/717 (50%), Gaps = 52/717 (7%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   L    K+F EMP +N+VSW  ++S  V+NG  E  L VY +M   G VP    L  
Sbjct: 4   KCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFALGC 63

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA  AL   E G   H   +K+G++KN +V +++L++YAK G  + A  VFE M    
Sbjct: 64  VTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMDNLV 123

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
              + AM+ G A+     E+L++  +M  K +S+D+ +  + L     +GC V  ++   
Sbjct: 124 VGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINAL-----KGCLVVGNL--- 175

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
               F R +HG  +     ++GF   +   NSL+DMY KNG    A  +F  L ++ ++S
Sbjct: 176 ---NFGRQIHGLIIQS---EVGFSTAVM--NSLMDMYFKNGGGLYALKVFDRLQDKDIIS 227

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
           WN + AG  Q   + +      ++   G +P+ VT   +   C  + D+ +G +      
Sbjct: 228 WNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAF 287

Query: 360 -----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +FDS P  S+ + N M+S Y+ + ++ EA+ 
Sbjct: 288 RFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALN 347

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF  +   G++ D  T +  L +C      + G+Q+H   +K+      YV S L+  Y 
Sbjct: 348 LFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYV 407

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
                + +   F+ +  LD+V W +MI+ L       EA     ++++    P +F F +
Sbjct: 408 GFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGS 467

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGK 569
           + + CA +++  Q + VH+ + K GY   +FV SA+I+ Y KCGDI  AR+ FD     +
Sbjct: 468 IFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFR 527

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + + +N M+  YA +G   EAV  ++ M  + ++P   TFV++++ACSH GLV+ G   F
Sbjct: 528 DVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFF 587

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
            SM LD+G++P  D+Y C++D   R G   +A+ +I+ MP    P IW  LL+ CR+H N
Sbjct: 588 KSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGN 647

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             L + AA++L +L P+N A Y LL+ +YS  G W D   VR+ M E  + KDP  S
Sbjct: 648 KELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCS 704



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/589 (25%), Positives = 263/589 (44%), Gaps = 54/589 (9%)

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y KCG+    + VF EM   N V++T ++SG  +       L ++  MIR  +  +  +
Sbjct: 1   MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
           L  V   CA  G G E                G  VHC  +K+G E +  + +S+L+MYA
Sbjct: 61  LGCVTKACAALG-GKE---------------LGLCVHCFALKVGMEKNPFVGSSILNMYA 104

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K GD++ AE +F  +    V  WN MI GY Q     ++++++  M+  G   D  T IN
Sbjct: 105 KLGDIEDAERVFECMDNLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFIN 164

Query: 344 MLVACVRSGDIKTGREM-----------------------------------FDSMPSPS 368
            L  C+  G++  GR++                                   FD +    
Sbjct: 165 ALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKD 224

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
           + SWN + +  SQ ++ +E  + F ++   G+KP+  T +I+   C     L SG Q H 
Sbjct: 225 IISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHC 284

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
            + +     +  V S LI ++S+C    +A  VF   P   I   N MI+G +LN  + E
Sbjct: 285 LAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAE 344

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIE 548
           A   F  +    +   + +F++ L +C +  +   GRQ+H  I K G+ +  +V S+L++
Sbjct: 345 ALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLK 404

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
            Y   G +  + +FF+ +   + V+W  MI      GY  EA+ L   +  +G KPD+  
Sbjct: 405 CYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFI 464

Query: 609 FVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           F +I   C+          + +S+ +  G E  +   + +ID   + G    A  + D+ 
Sbjct: 465 FGSIFNCCAGIAAYRQTKSV-HSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQT 523

Query: 669 PCKDDPVIWEVLLSSCRLHANVRLAKRAAE--ELFRLDPKNSAPYSLLA 715
               D +++  ++ +   H  VR A    E  +L  L+P  +   S+++
Sbjct: 524 SRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVIS 572



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 234/510 (45%), Gaps = 52/510 (10%)

Query: 51  HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
            K+ +  ++IL+   K  D+E A ++F+ M    V  WN +I    +     ++L + + 
Sbjct: 90  EKNPFVGSSILNMYAKLGDIEDAERVFECMDNLVVGCWNAMIGGYAQCSYGFESLKIVSV 149

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M  +G      T  +  K    + ++  GR+ HGL+I+  +  +  V N+L+ +Y K G 
Sbjct: 150 MQYKGISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGG 209

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
             +A+ VF+ + + + +++  + +GL++ D   E    F  ++   +  + V+ S +   
Sbjct: 210 GLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILF-- 267

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
                CG   D+           V G Q HCL  + G   +  +++SL++M+++ G M  
Sbjct: 268 ---RFCGEALDL-----------VSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRM 313

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A ++F + P +S+ + N MI+GY     + +A+ L   +   G E DE T  + L AC R
Sbjct: 314 ACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFR 373

Query: 351 SGDIKTGREM-----------------------------------FDSMPSPSVSSWNAM 375
           + + K GR+M                                   F+ +    + SW AM
Sbjct: 374 TENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAM 433

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +S+        EAI L   ++  G KPD      I + CA +      K VH+  +K   
Sbjct: 434 ISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGY 493

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFK 494
               +VAS +I  Y+KC   E A RVF +     D++ +N+M+   + + L  EA   F+
Sbjct: 494 EAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFE 553

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           +M+   + P+Q +F +V+S+C+ L    QG
Sbjct: 554 KMKLATLEPSQATFVSVISACSHLGLVEQG 583



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 203/459 (44%), Gaps = 62/459 (13%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N+++    K+    +A K+FD + +++++SWN + + L +     +    ++K+   G  
Sbjct: 198 NSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLK 257

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  +T + +F+     LD+  G + H L  + G+     V ++L++++++CG  + A  V
Sbjct: 258 PNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLV 317

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+     +  T   M+SG        EAL +F  +    +  D  + SS L  C      
Sbjct: 318 FDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEAC------ 371

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                F   + K  R +HG       +K GF +  ++ +SLL  Y   G +D +   F+ 
Sbjct: 372 -----FRTENQKLGRQMHGT-----IVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNG 421

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE------------------V 339
           +    +VSW  MI+    K  S++AI LL R+K  G +PDE                   
Sbjct: 422 VERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQT 481

Query: 340 TSINMLV-----------------ACVRSGDIKTGREMFDSMPS-PSVSSWNAMLSSYSQ 381
            S++ LV                 A  + GDI+  R +FD       V  +N M+ +Y+ 
Sbjct: 482 KSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAH 541

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI---- 437
               +EA++ F +M+   ++P + T   ++S+C+ +G++E G  +   S+     +    
Sbjct: 542 HGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQG-DIFFKSMNLDYGMDPSP 600

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
           DNY    L+ ++S   RN   E   H I  +    W ++
Sbjct: 601 DNY--GCLVDLFS---RNGFLEDAKHIIETMPFPPWPAI 634



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 183/426 (42%), Gaps = 56/426 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V+G   H    R G+ D+  + + LI ++S+C     A  +FD  P K I++ N ++S  
Sbjct: 277 VSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMIS-- 334

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                    Y L                     N    +AL+++  ++  G      T +
Sbjct: 335 --------GYNL---------------------NCHNAEALNLFCNLNGLGLEADECTFS 365

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S  +A     + + GR+ HG ++K G     YV ++LL  Y   G    +   F  +   
Sbjct: 366 SALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERL 425

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ AM+S L       EA+ +   +       D     S+   CA    G+ +  + 
Sbjct: 426 DLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCA----GIAA--YR 479

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE-RSV 303
           Q+          + VH L +K+G+EA + ++++++D YAK GD+++A  +F      R V
Sbjct: 480 QT----------KSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDV 529

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           + +N M+  Y       +A+E  ++MK    EP + T ++++ AC   G ++ G   F S
Sbjct: 530 ILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKS 589

Query: 364 MP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           M       PS  ++  ++  +S++   ++A  +   M F    P       +L+ C   G
Sbjct: 590 MNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPF---PPWPAIWRSLLNGCRIHG 646

Query: 419 ILESGK 424
             E G+
Sbjct: 647 NKELGE 652


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/656 (31%), Positives = 344/656 (52%), Gaps = 91/656 (13%)

Query: 137 EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK---HAVPVFEEMSEPNEVTFTAMM 193
           + G+  H  +I  G + + Y+   +L LYA+ G      +A  +FEEM E N   +  M+
Sbjct: 88  QRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMI 147

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC----AREGCGVESDVFAQSDNK 249
              A+ D  +EA  +F  M++  V  D+ + +S L VC    +R+G              
Sbjct: 148 LAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG-------------- 193

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+QVH   I  GF+ D  + N+L+DMYAK  D +S   +F  + ER+ V+WN +
Sbjct: 194 ------GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSI 247

Query: 310 IAGYGQKYQSTKAIELLQRMKSC--GFEPDEVTSINMLVACVRSGDIKTGR--------- 358
           I+   Q      A+ L  RM+    G +PD+ T   +L  C    +   GR         
Sbjct: 248 ISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRA 307

Query: 359 --------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                     E+F+ M   +  SWN+M+  Y Q+   +EA++LF
Sbjct: 308 NITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLF 367

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           ++MQ  G+KPD  +L+ +LSSC ++   + G+++H   ++     +  +   L+ +Y+KC
Sbjct: 368 KQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKC 427

Query: 453 QRNELAERVFHRIPELD--IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
              + A +V+ +  + D     WNS++AG +   L  E+F  F +M ++++     +  T
Sbjct: 428 GSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVT 487

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +                         VN + + +AL++MY KCG I  AR  FD M+GKN
Sbjct: 488 I-------------------------VNLLVLETALVDMYSKCGAITKARTVFDNMNGKN 522

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+WN MI GY+++G   EA+ LY++M   G+ P+++TF+AIL+ACSH+GLV+ G+ IF 
Sbjct: 523 IVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFT 582

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SMQ D+ +E   +HYTCM+D LGRAG   +A+  +++MP + +   W  LL +CR+H ++
Sbjct: 583 SMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDM 642

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + + AA+ LF LDP+N  PY +++NIY++ GRW ++  +R++M    + KDP  S
Sbjct: 643 DMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVS 698



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/612 (25%), Positives = 299/612 (48%), Gaps = 80/612 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++ NG   D +L  +++ LY++                           + C 
Sbjct: 90  GKSIHTQMISNGYNPDAYLMTKILMLYAR---------------------------SGC- 121

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            DDL +A KLF+EMPERN+ +WN +I A  R     +A  ++++M   G  P + T AS 
Sbjct: 122 LDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASA 181

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +   AL   + G++ H  +I  G   + +V NAL+ +YAKC   +  + VF+EM E N+
Sbjct: 182 LRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQ 241

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRK--AVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           VT+ +++S  A+     +AL +F  M      +  D  + +++L +CA +          
Sbjct: 242 VTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQ---------- 291

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           ++DN+      G+Q+H   I+     ++ +   L+ MY++ G ++ A+ IF+ + ER+  
Sbjct: 292 RNDNQ------GRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAY 345

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SWN MI GY Q  ++ +A+ L ++M+  G +PD  +  +ML +CV   D + GRE+ + +
Sbjct: 346 SWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFI 405

Query: 365 PSPSVSSWN----AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI--ILSSCAAMG 418
              ++         ++  Y++  +   A K++ +     +K DR T     IL+  A  G
Sbjct: 406 VRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQT----IKKDRNTALWNSILAGYANKG 461

Query: 419 I-----------LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           +           LES  +    ++ T  ++   + + L+ +YSKC     A  VF  +  
Sbjct: 462 LKKESFNHFLEMLESDIEYDVLTMVTIVNLL-VLETALVDMYSKCGAITKARTVFDNMNG 520

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            +IV WN+MI+G S +    EA + +++M +  MYP + +F  +LS+C+      +G ++
Sbjct: 521 KNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRI 580

Query: 528 HAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNG 585
              +++D  +       + ++++  + G +  A++F + M  +  V TW  ++       
Sbjct: 581 FTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLG------ 634

Query: 586 YGDEAVRLYKDM 597
               A R++KDM
Sbjct: 635 ----ACRVHKDM 642



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 121/224 (54%), Gaps = 5/224 (2%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK--CQRNE-LAERVFHRIP 466
           ++  C      + GK +H   +    + D Y+ + ++ +Y++  C  +   A ++F  +P
Sbjct: 77  LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP 136

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
           E ++  WN+MI   +     +EA+  F +M +  + P  F+FA+ L  C  L S   G+Q
Sbjct: 137 ERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQ 196

Query: 527 VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           VH+++   G+  D FVG+ALI+MY KC D     + FD M  +N VTWN +I   AQ G+
Sbjct: 197 VHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGH 256

Query: 587 GDEAVRLYKDMIAS--GVKPDDITFVAILTACSHSGLVDVGVEI 628
            ++A+ L+  M  S  G++PD  TF  +LT C++    + G +I
Sbjct: 257 FNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQI 300



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 39/268 (14%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG---DIYGARQFFD 564
           +++++  C   +S  +G+ +H Q+  +GY  D ++ + ++ +Y + G   D+  AR+ F+
Sbjct: 74  YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS------- 617
            M  +N   WN MI  YA+     EA  ++  M+  GV PD+ TF + L  C        
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG 193

Query: 618 ----HSGLVDVG-----------VEIFNSMQLDHGVEPILDH--------YTCMIDCLGR 654
               HS L+  G           ++++     +     + D         +  +I    +
Sbjct: 194 GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQ 253

Query: 655 AGHFHEAEMLIDEMPCKDDPV-----IWEVLLSSCRLHANVRLAKRAAEELFRLD-PKNS 708
            GHF++A +L   M   +D +      +  LL+ C    N    ++    L R +  KN 
Sbjct: 254 FGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNI 313

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSE 736
              + L ++YS  GR +  + +   M+E
Sbjct: 314 IVETELVHMYSECGRLNYAKEIFNRMAE 341


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/622 (34%), Positives = 335/622 (53%), Gaps = 76/622 (12%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH------AVPVFEEMSEPNEVTFTAMM 193
           R  H  +IK GL    Y  + L+     C  + H      A+ VFE + EPN + +  M 
Sbjct: 19  RMIHAQMIKTGLHNTNYALSKLIEF---CVLSPHFDGLPYAISVFETIQEPNLLIWNTMF 75

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            G A +   V AL ++  MI   +  +  +   +L  CA+      S  F +        
Sbjct: 76  RGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK------SKAFRE-------- 121

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             GQQ+H   +KLG++ DL++  SL+ MY +NG ++ A  +F     R VVS+  +I GY
Sbjct: 122 --GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGY 179

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
             K                                   G I + ++MFD +P   V SWN
Sbjct: 180 ASK-----------------------------------GYIASAQKMFDEIPIKDVVSWN 204

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           AM+S Y+++ N+KEA++LF+EM    V+PD +T+  ++S+CA    +E G+QVH      
Sbjct: 205 AMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH------ 258

Query: 434 ASHIDNY-------VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
            S ID++       + + LI +Y KC   E A  +F  +   D++ WN++I G +  +L 
Sbjct: 259 -SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 317

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK--DGYVNDIFVGS 544
            EA + F++M ++   P   +  ++L +CA L +   GR +H  I K   G  N     +
Sbjct: 318 KEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRT 377

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
           +LI+MY KCGDI  A+Q FD +  ++  +WN MI G+A +G  + A  ++  M  + ++P
Sbjct: 378 SLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEP 437

Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEML 664
           DDITFV +L+ACSHSG++D+G  IF SM+ D+ + P L+HY CMID LG +G F EAE +
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 497

Query: 665 IDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRW 724
           I+ M  + D VIW  LL +C+++ANV L +  A+ L +++PKN   Y LL+NIY++ GRW
Sbjct: 498 INTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRW 557

Query: 725 DDLRAVRELMSENCIVKDPAYS 746
           +++  +R L+++  + K P  S
Sbjct: 558 NEVAKIRALLNDKGMKKVPGCS 579



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 212/428 (49%), Gaps = 22/428 (5%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H H+L+ G   D ++   LI +Y +      A+ +FD+  H+D+ S+ A++
Sbjct: 117 KAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALI 176

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +       +  A K+FDE+P ++VVSWN +IS     G  ++AL ++ +M      P   
Sbjct: 177 TGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDES 236

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ SV  A      +E GR+ H  +   G   N+ + NAL+ LY KCG  + A  +FE +
Sbjct: 237 TMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGL 296

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S  + +++  ++ G    +   EAL +F+ M+R   S + V++ S+L  CA  G      
Sbjct: 297 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGR 356

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                 NK  + V     H                SL+DMYAK GD+++A+ +F ++  R
Sbjct: 357 WIHVYINKRLKGVANASSH--------------RTSLIDMYAKCGDIEAAQQVFDSILNR 402

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
           S+ SWN MI G+    ++  A ++  RM+    EPD++T + +L AC  SG +  GR +F
Sbjct: 403 SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIF 462

Query: 362 DSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            SM      +P +  +  M+     S   KEA ++   M+   ++PD      +L +C  
Sbjct: 463 RSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKM 519

Query: 417 MGILESGK 424
              +E G+
Sbjct: 520 YANVELGE 527



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 217/487 (44%), Gaps = 112/487 (22%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           +++HA +++ GL +  +  ++LIE                            +LS     
Sbjct: 19  RMIHAQMIKTGLHNTNYALSKLIEF--------------------------CVLSPHF-- 50

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D L +A  +F+ + E N++ WN +      +     AL +Y  M + G +P   T   + 
Sbjct: 51  DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLL 110

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K+         G++ HG V+K+G D ++YV  +L+S+Y + G  + A  VF++ S  + V
Sbjct: 111 KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 170

Query: 188 TFT-------------------------------AMMSGLAKTDRVVEALEMFRLMIRKA 216
           ++T                               AM+SG A+T    EALE+F+ M++  
Sbjct: 171 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 230

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  ++ SV+  CA +   +E                G+QVH      GF ++L + N
Sbjct: 231 VRPDESTMVSVVSACA-QSASIEL---------------GRQVHSWIDDHGFGSNLKIVN 274

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D+Y K G++++A  +F  L  + V+SWN +I GY       +A+ L Q M   G  P
Sbjct: 275 ALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESP 334

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           ++VT +++L AC                                      + GDI+  ++
Sbjct: 335 NDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQ 394

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +FDS+ + S+SSWNAM+  ++       A  +F  M+   ++PD  T   +LS+C+  G+
Sbjct: 395 VFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGM 454

Query: 420 LESGKQV 426
           L+ G+ +
Sbjct: 455 LDLGRHI 461



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 146/296 (49%), Gaps = 36/296 (12%)

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIG---IYSKCQRNELAERVFHRIPELDIVCWNSM 476
           L+S + +HA  +KT  H  NY  S LI    +         A  VF  I E +++ WN+M
Sbjct: 15  LQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTM 74

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
             G +L+S  + A   +  M    + P  ++F  +L SCAK  +  +G+Q+H  + K GY
Sbjct: 75  FRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGY 134

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFD------------MMHG---------------- 568
             D++V ++LI MY + G +  AR+ FD            ++ G                
Sbjct: 135 DLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDE 194

Query: 569 ---KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
              K+ V+WN MI GYA+ G   EA+ L+K+M+ + V+PD+ T V++++AC+ S  +++G
Sbjct: 195 IPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELG 254

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            ++ + +  DHG    L     +ID   + G    A  L + +  K D + W  L+
Sbjct: 255 RQVHSWID-DHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLI 308


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 209/661 (31%), Positives = 347/661 (52%), Gaps = 52/661 (7%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           TL SV +       ++ G+     +   G   +  + + L  +Y  CG  K A  VF+++
Sbjct: 96  TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQV 155

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
                + +  +M+ LAK+     ++ +F+ M+   V +DS + S V              
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV-------------- 201

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
             ++S +       G+Q+H   +K GF     + NSL+  Y KN  +DSA  +F  + ER
Sbjct: 202 --SKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTER 259

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS---------- 351
            V+SWN +I GY     + K + +  +M   G E D  T +++   C  S          
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVH 319

Query: 352 -------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                    GD+ + + +F  M   SV S+ +M++ Y++     
Sbjct: 320 CFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAG 379

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA+KLF EM+  G+ PD  T+  +L+ CA   +L+ GK+VH    +     D +V++ L+
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALM 439

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY-PTQ 505
            +Y+KC     AE VF  +   DI+ WN++I G S N    EA   F  +   + + P +
Sbjct: 440 DMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDE 499

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            + A VL +CA LS+  +GR++H  I ++GY +D  V ++L++MY KCG +  AR  FD 
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDD 559

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  K+ V+W  MI GY  +G+G EA+ L+  M  +G++PD+I+FV++L ACSHSGLVD G
Sbjct: 560 ITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEG 619

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
              FN M+ +  +EP ++HY C++D L R G+  +A   I+ MP   D  IW  LL  CR
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCR 679

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
           +H +V+LA+R AE++F L+P+N+  Y L+ANIY+   +W++++ +R+ + +  + K+P  
Sbjct: 680 IHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGC 739

Query: 746 S 746
           S
Sbjct: 740 S 740



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 266/561 (47%), Gaps = 58/561 (10%)

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
           A++   C   DL+ A ++FD++     + WN L++ L ++G    ++ ++ KM + G   
Sbjct: 136 ALMYTNC--GDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEM 193

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
              T + V K+ ++L  V  G + HG ++K G  +   V N+L++ Y K      A  VF
Sbjct: 194 DSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVF 253

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           +EM+E + +++ ++++G        + L +F  M+   + ID  ++ SV   CA      
Sbjct: 254 DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCAD----- 308

Query: 239 ESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                       SR +  G+ VHC  +K  F  +    N+LLDMY+K GD+DSA+V+F  
Sbjct: 309 ------------SRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFRE 356

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------ 351
           +  RSVVS+  MIAGY ++  + +A++L + M+  G  PD  T   +L  C R+      
Sbjct: 357 MSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEG 416

Query: 352 -----------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                        G ++    +F  M    + SWN ++  YS++
Sbjct: 417 KRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKN 476

Query: 383 ENHKEAIKLFREMQF-RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
               EA+ LF  +   +   PD  T+A +L +CA++   + G+++H   ++     D +V
Sbjct: 477 CYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV 536

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
           A+ L+ +Y+KC    LA  +F  I   D+V W  MIAG  ++    EA   F QMRQ  +
Sbjct: 537 ANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGI 596

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGAR 560
            P + SF ++L +C+      +G +    +  +  +       A +++M  + G++  A 
Sbjct: 597 EPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAY 656

Query: 561 QFFDMMH-GKNTVTWNEMIHG 580
           +F + M    +   W  ++ G
Sbjct: 657 RFIENMPIPPDATIWGALLCG 677



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 228/514 (44%), Gaps = 89/514 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ LH +IL++G  +   + N L+  Y K +   SA+                      
Sbjct: 213 GGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSAR---------------------- 250

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                    K+FDEM ER+V+SWN++I+  V NGL EK LSV+ +M   G      T+ S
Sbjct: 251 ---------KVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVS 301

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           VF        +  GR  H   +K    +     N LL +Y+KCG    A  VF EMS  +
Sbjct: 302 VFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRS 361

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T+M++G A+     EA+++F  M  + +S D  ++++VL  CAR     E      
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDE------ 415

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G++VH    +     D+ +SN+L+DMYAK G M  AE++FS +  + ++S
Sbjct: 416 ----------GKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIIS 465

Query: 306 WNVMIAGYGQKYQSTKAIELLQ-RMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----- 359
           WN +I GY +   + +A+ L    +    F PDE T   +L AC        GRE     
Sbjct: 466 WNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 525

Query: 360 ------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                         +FD + S  + SW  M++ Y      KEAI
Sbjct: 526 MRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAI 585

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---VHAASLKTASHIDNYVASGLI 446
            LF +M+  G++PD  +   +L +C+  G+++ G +   +     K    +++Y    ++
Sbjct: 586 ALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYAC--IV 643

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
            + ++      A R    +P   D   W +++ G
Sbjct: 644 DMLARTGNLSKAYRFIENMPIPPDATIWGALLCG 677



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 238/507 (46%), Gaps = 75/507 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   ++     +   CN L+++YSKC +  SA+ +F +M  + + S+ ++++   +
Sbjct: 315 GRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAR 374

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A KLF+EM E                               EG  P   T+ +V
Sbjct: 375 EGLAGEAVKLFEEMEE-------------------------------EGISPDVYTVTAV 403

Query: 127 FK--ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
               A   LLD   G+R H  + +  +  +I+V+NAL+ +YAKCG  + A  VF EM   
Sbjct: 404 LNCCARNRLLD--EGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVK 461

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFR-LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
           + +++  ++ G +K     EAL +F  L++ K  S D  +++ VL  CA           
Sbjct: 462 DIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACA----------- 510

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
             S + F +   G+++H   ++ G+ +D H++NSL+DMYAK G +  A ++F ++  + +
Sbjct: 511 --SLSAFDK---GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDL 565

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           VSW VMIAGYG      +AI L  +M+  G EPDE++ +++L AC  SG +  G   F+ 
Sbjct: 566 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNI 625

Query: 364 MP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           M       P+V  +  ++   +++ N  +A +    M    + PD T    +L  C    
Sbjct: 626 MRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMP---IPPDATIWGALLCGCRIHH 682

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI-----VCW 473
            ++  ++V     +       Y    +  IY++ ++ E  +R+  RI +  +       W
Sbjct: 683 DVKLAERVAEKVFELEPENTGYYVL-MANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSW 741

Query: 474 -------NSMIAGLSLN--SLDIEAFM 491
                  N  +AG S N  +  IEAF+
Sbjct: 742 IEIKGRVNIFVAGDSSNPETEKIEAFL 768


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/589 (33%), Positives = 317/589 (53%), Gaps = 51/589 (8%)

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           +S L K  R+ EAL +   MI +   + S     +L  CAR                   
Sbjct: 68  VSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECAR----------------LRS 111

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G++VH   +K G + + +L N+LL MYAK G +  A  +F  + +R++VSW  MI  
Sbjct: 112 LEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEA 171

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------------- 349
           +    Q+ +A +  + MK  G +PD+VT +++L A                         
Sbjct: 172 FVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELE 231

Query: 350 ------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                       + GDI   + +FD +P  +V +W  +++ Y+Q      A++L  +MQ 
Sbjct: 232 PRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQ 291

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
             V P++ T   IL  C     LE GK+VH   +++    + +V + LI +Y KC   + 
Sbjct: 292 AEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKE 351

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A ++F  +P  D+V W +M+ G +      EA   F++M+Q  + P + +F + L+SC+ 
Sbjct: 352 ARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSS 411

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
            +   +G+ +H Q+   GY  D+++ SAL+ MY KCG +  AR  F+ M  +N V W  M
Sbjct: 412 PAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAM 471

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I G AQ+G   EA+  ++ M   G+KPD +TF ++L+AC+H GLV+ G + F SM LD+G
Sbjct: 472 ITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYG 531

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           ++P+++HY+C +D LGRAGH  EAE +I  MP +  P +W  LLS+CR+H++V   +RAA
Sbjct: 532 IKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAA 591

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           E + +LDP +   Y  L+NIY++ GR++D   VR++M +  +VK+P  S
Sbjct: 592 ENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQS 640



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 237/473 (50%), Gaps = 57/473 (12%)

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           +S L + G  ++AL + N M  +G          + +    L  +E GR  H  ++K G+
Sbjct: 68  VSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 127

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
             N Y+ N LLS+YAKCG    A  VF+ + + N V++TAM+      ++ +EA + +  
Sbjct: 128 QPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYET 187

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN---VHGQQVHCLTIKLGF 268
           M       D V+  S+L                   N F+       GQ+VH    K G 
Sbjct: 188 MKLAGCKPDKVTFVSLL-------------------NAFTNPELLQVGQKVHMEIAKAGL 228

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           E +  +  SL+ MYAK GD+  A+VIF  LPE++VV+W ++IAGY Q+ Q   A+ELL++
Sbjct: 229 ELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEK 288

Query: 329 MKSCGFEPDEVTSINMLVACV-----------------------------------RSGD 353
           M+     P+++T  ++L  C                                    + G 
Sbjct: 289 MQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGG 348

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           +K  R++F  +P   V +W AM++ Y+Q   H EAI LFR MQ +G+KPD+ T    L+S
Sbjct: 349 LKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTS 408

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           C++   L+ GK +H   +     +D Y+ S L+ +Y+KC   + A  VF+++ E ++V W
Sbjct: 409 CSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAW 468

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
            +MI G + +    EA  +F+QM++  + P + +F +VLS+C  +    +GR+
Sbjct: 469 TAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 521



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 236/471 (50%), Gaps = 58/471 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  I + GL  +  +   L+ +Y+KC +   AQ                       
Sbjct: 216 GQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQ----------------------- 252

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +FD++PE+NVV+W  LI+   + G  + AL +  KM      P  IT  S+
Sbjct: 253 --------VIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSI 304

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +  T  L +EHG++ H  +I+ G  + I+V NAL+++Y KCG  K A  +F ++   + 
Sbjct: 305 LQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDV 364

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+TAM++G A+     EA+++FR M ++ +  D ++ +S L  C+       S  F Q 
Sbjct: 365 VTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCS-------SPAFLQE 417

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                +++H Q VH      G+  D++L ++L+ MYAK G MD A ++F+ + ER+VV+W
Sbjct: 418 ----GKSIHQQLVHA-----GYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAW 468

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-- 364
             MI G  Q  +  +A+E  ++MK  G +PD+VT  ++L AC   G ++ GR+ F SM  
Sbjct: 469 TAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYL 528

Query: 365 ---PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P V  ++  +    ++ + +EA  +   M F   +P  +    +LS+C     +E
Sbjct: 529 DYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPF---QPGPSVWGALLSACRIHSDVE 585

Query: 422 SGKQVHAASLKTASHIDN-YVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
            G++     LK     D  YVA  L  IY+   R E AE+V   + + D+V
Sbjct: 586 RGERAAENVLKLDPDDDGAYVA--LSNIYAAAGRYEDAEKVRQVMEKRDVV 634



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 246/520 (47%), Gaps = 87/520 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA IL++G+  + +L N L+ +Y+KC +                            
Sbjct: 115 GREVHAAILKSGIQPNRYLENTLLSMYAKCGS---------------------------- 146

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L  A ++FD + +RN+VSW  +I A V      +A   Y  M   G  P  +T  S+
Sbjct: 147 ---LTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSL 203

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A T    ++ G++ H  + K GL+    V  +L+ +YAKCG    A  +F+++ E N 
Sbjct: 204 LNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNV 263

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+T +++G A+  +V  ALE+   M +  V+ + ++ +S+L     +GC     +    
Sbjct: 264 VTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSIL-----QGCTTPLAL---- 314

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   HG++VH   I+ G+  ++ + N+L+ MY K G +  A  +F +LP R VV+W
Sbjct: 315 -------EHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTW 367

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
             M+ GY Q     +AI+L +RM+  G +PD++T  + L +C                  
Sbjct: 368 TAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVH 427

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G +   R +F+ M   +V +W AM++  +Q    +EA++ 
Sbjct: 428 AGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEY 487

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIY 449
           F +M+ +G+KPD+ T   +LS+C  +G++E G++ H  S+     I   V   S  + + 
Sbjct: 488 FEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDLL 546

Query: 450 SKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIE 488
            +    E AE V   +P +     W ++++   ++S D+E
Sbjct: 547 GRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHS-DVE 585



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 177/359 (49%), Gaps = 36/359 (10%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           ++I+  NA+++  CK   L+ A KLF ++P R+VV+W  +++   + G  ++A+ ++ +M
Sbjct: 331 REIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRM 390

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
             +G  P  +T  S   + ++   ++ G+  H  ++  G   ++Y+ +AL+S+YAKCG  
Sbjct: 391 QQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSM 450

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A  VF +MSE N V +TAM++G A+  R  EALE F  M ++ +  D V+ +SVL  C
Sbjct: 451 DDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSAC 510

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
              G         +   K  R+++        +  G +  +   +  +D+  + G ++ A
Sbjct: 511 THVG-------LVEEGRKHFRSMY--------LDYGIKPMVEHYSCFVDLLGRAGHLEEA 555

Query: 292 EVIFSNLPERSVVS-WNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDE----VTSIN 343
           E +   +P +   S W  +++    +    +  +A E + ++     +PD+    V   N
Sbjct: 556 ENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKL-----DPDDDGAYVALSN 610

Query: 344 MLVACVRSGDIKTGREMF---DSMPSPSVSSW----NAMLSSYSQSENHKEAIKLFREM 395
           +  A  R  D +  R++    D +  P   SW      +   + + ++H EA +++ E+
Sbjct: 611 IYAAAGRYEDAEKVRQVMEKRDVVKEPG-QSWIEVDGKVHVFHVEDKSHPEAKEIYAEL 668


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/663 (32%), Positives = 351/663 (52%), Gaps = 56/663 (8%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L S+ K       ++ G+  H  ++ +GL  NI +  +L++LY  C   + A  VF+ + 
Sbjct: 6   LLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIE 65

Query: 183 EPNEVT-FTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            P ++T +  +M+   K    +E LE+F RL+    +  D+ +  SVL  C+  G     
Sbjct: 66  NPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG----- 120

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                      R  +G+ VH   IK GF  D+ + +S + MYAK    + A  +F  +PE
Sbjct: 121 -----------RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPE 169

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           R V SWN +I+ Y Q  Q  KA+EL + MK  GF+PD VT   ++ +C R  D++ G+E+
Sbjct: 170 RDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEI 229

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              F+ +   +V SWN+M++ YS   + 
Sbjct: 230 HMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDS 289

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           K  I+LFR M   G++P  TTL+ IL +C+    L+ GK +H   ++     D +V S L
Sbjct: 290 KSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSL 349

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +Y KC     AE VF  +P+ ++V WN MI+G       +EA + F  MR+  + P  
Sbjct: 350 IDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDA 409

Query: 506 FSFATVLSSCAKLSSSFQGRQVHA-QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            +F +VL +C++L+   +G+++H   IE    +N++ +G AL++MY KCG +  A   F+
Sbjct: 410 ITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG-ALLDMYAKCGAVDEALHIFN 468

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            +  ++ V+W  MI  Y  +G   EA++L++ M  S  KPD +TF+AIL+ACSH+GLVD 
Sbjct: 469 QLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDE 528

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP-CKDDPVIWEVLLSS 683
           G   FN M  ++G +P ++HY+C+ID LGR G   EA  ++   P  ++D  +   L S+
Sbjct: 529 GCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSA 588

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           C LH  + L ++    L   DP + + Y +L+N+Y+S+ +WD++R VR  + E  + K+P
Sbjct: 589 CHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNP 648

Query: 744 AYS 746
             S
Sbjct: 649 GCS 651



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 159/546 (29%), Positives = 270/546 (49%), Gaps = 82/546 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKL+H  I+  GL ++  LC  LI LY  C+   SA+ +F  +                 
Sbjct: 22  GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTI----------------- 64

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLAS 125
                       E P  ++  WN L++A  +N +  + L V++++ +  ++ P   T  S
Sbjct: 65  ------------ENP-LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPS 111

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA + L  V +G+  H  VIK G   ++ V ++ + +YAKC   + A+ +F+EM E +
Sbjct: 112 VLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERD 171

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             ++  ++S   +  +  +ALE+F  M       DSV+L++V+  CAR            
Sbjct: 172 VASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCAR------------ 219

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+++H   ++ GF  D  +S++L+DMY K G ++ A+ +F  +  ++VVS
Sbjct: 220 ----LLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVS 275

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS-------------- 351
           WN MIAGY  K  S   IEL +RM   G  P   T  ++L+AC RS              
Sbjct: 276 WNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYII 335

Query: 352 ---------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                G+I +   +F +MP  +V SWN M+S Y +  ++ EA+ 
Sbjct: 336 RNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALV 395

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +F +M+  GVKPD  T   +L +C+ + +LE GK++H   +++   I+  V   L+ +Y+
Sbjct: 396 IFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYA 455

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   + A  +F+++PE D V W SMIA    +    EA   F++M+Q++  P + +F  
Sbjct: 456 KCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLA 515

Query: 511 VLSSCA 516
           +LS+C+
Sbjct: 516 ILSACS 521



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 249/503 (49%), Gaps = 93/503 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H H++++G   D  + +  + +Y+KCN                             
Sbjct: 125 GKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNV---------------------------- 156

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               E A KLFDEMPER+V SWNN+IS   ++G  EKAL ++ +M   GF P  +TL +V
Sbjct: 157 ---FEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTV 213

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             +   LLD+E G+  H  +++ G   + +V++AL+ +Y KCG  + A  VFE++   N 
Sbjct: 214 ISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNV 273

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +M++G +        +E+FR M  + +     +LSS+L  C+R             
Sbjct: 274 VSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSR------------- 320

Query: 247 DNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
               S N+  G+ +H   I+   EAD+ +++SL+D+Y K G++ SAE +F N+P+ +VVS
Sbjct: 321 ----SVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVS 376

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
           WNVMI+GY +     +A+ +   M+  G +PD +T  ++L AC +   ++ G+E      
Sbjct: 377 WNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFII 436

Query: 360 -----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +F+ +P     SW +M+++Y       EA+K
Sbjct: 437 ESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALK 496

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG-----KQVHAASLKTASHIDNYVASGL 445
           LF +MQ    KPD+ T   ILS+C+  G+++ G     + +     K A  +++Y  S L
Sbjct: 497 LFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPA--VEHY--SCL 552

Query: 446 IGIYSKCQRNELAERVFHRIPEL 468
           I +  +  R   A  +  R P++
Sbjct: 553 IDLLGRVGRLREAYEILQRTPDI 575


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/729 (31%), Positives = 379/729 (51%), Gaps = 80/729 (10%)

Query: 82   ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
             R+   W +L+ +   +     A+S Y  M      P +    +V KA+ A+ D+  G++
Sbjct: 292  RRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQ 351

Query: 142  CHGLVIKIG--LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
             H  V K G     ++ VAN+L+++Y KCG    A  VF+++ + + V++ +M++ L + 
Sbjct: 352  IHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRF 411

Query: 200  DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
            +    +L +FRLM+ + V   S +L SV   C+    GV                 G+QV
Sbjct: 412  EEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRL---------------GKQV 456

Query: 260  HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
            H  T++ G +   + +N+L+ MYA+ G ++ A+ +F     + +VSWN +I+   Q  + 
Sbjct: 457  HAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRF 515

Query: 320  TKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VRSGDI--------- 354
             +A+  +  M   G  PD VT  ++L AC                +R+GD+         
Sbjct: 516  EEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTA 575

Query: 355  -----------KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG-VKP 402
                       K GR +FD +   +V+ WNA+L+ Y+++E   +A++LF EM       P
Sbjct: 576  LVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCP 635

Query: 403  DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
            + TT A +L +C    +    + +H   +K     D YV + L+ +YS+  R E+++ +F
Sbjct: 636  NATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIF 695

Query: 463  HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM--RQNE----------------MYPT 504
             R+ + DIV WN+MI G  +     +A     +M  RQ E                  P 
Sbjct: 696  GRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPN 755

Query: 505  QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
              +  TVL  CA L++  +G+++HA   K     D+ VGSAL++MY KCG +  A + FD
Sbjct: 756  SVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFD 815

Query: 565  MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG------VKPDDITFVAILTACSH 618
             M  +N +TWN +I  Y  +G G+EA+ L++ M A G      ++P+++T++AI  ACSH
Sbjct: 816  QMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSH 875

Query: 619  SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV-IW 677
            SG+VD G+ +F++M+  HGVEP  DHY C++D LGR+G   EA  LI+ MP   + V  W
Sbjct: 876  SGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAW 935

Query: 678  EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
              LL +CR+H +V   + AA+ LF L+P  ++ Y L++NIYSS G WD    VR+ M E 
Sbjct: 936  SSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEM 995

Query: 738  CIVKDPAYS 746
             + K+P  S
Sbjct: 996  GVRKEPGCS 1004



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 244/539 (45%), Gaps = 79/539 (14%)

Query: 40  HSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNG 99
           H+    F   P   +   N++++   K  DL  A ++FD++P+R+ VSWN++I+ L R  
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFE 412

Query: 100 LEEKALSVYNKMSNEGFVPTHITLASVFKASTALL-DVEHGRRCHGLVIKIGLDKNIYVA 158
             E +L ++  M +E   PT  TL SV  A + +   V  G++ H   ++ G D   Y  
Sbjct: 413 EWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTN 471

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           NAL+++YA+ G    A  +F      + V++  ++S L++ DR  EAL    LMI   V 
Sbjct: 472 NALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVR 531

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNS 277
            D V+L+SVL  C+                +  R   G+++HC  ++ G    +  +  +
Sbjct: 532 PDGVTLASVLPACS----------------QLERLRIGREIHCYALRNGDLIENSFVGTA 575

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEP 336
           L+DMY          ++F  +  R+V  WN ++AGY +     +A+ L   M S   F P
Sbjct: 576 LVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCP 635

Query: 337 DEVTSINMLVACVRS-----------------------------------GDIKTGREMF 361
           +  T  ++L ACVR                                    G ++  + +F
Sbjct: 636 NATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIF 695

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR----------------GV--KPD 403
             M    + SWN M++       + +A+ L  EMQ R                GV  KP+
Sbjct: 696 GRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPN 755

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             TL  +L  CAA+  L  GK++HA ++K    +D  V S L+ +Y+KC    LA RVF 
Sbjct: 756 SVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFD 815

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM------RQNEMYPTQFSFATVLSSCA 516
           ++P  +++ WN +I    ++    EA   F+ M       +  + P + ++  + ++C+
Sbjct: 816 QMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACS 874



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 234/545 (42%), Gaps = 120/545 (22%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA+ LRNG    T+  N L+ +Y++    + A+ LF     KD+ SWN +      
Sbjct: 453 GKQVHAYTLRNGDLR-TYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTV------ 505

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    IS+L +N   E+AL     M  +G  P  +TLASV
Sbjct: 506 -------------------------ISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASV 540

Query: 127 FKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A + L  +  GR  H   ++ G L +N +V  AL+ +Y  C   K    VF+ +    
Sbjct: 541 LPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRT 600

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFA 244
              + A+++G A+ +   +AL +F  MI ++    ++ + +SVL  C R  C V SD   
Sbjct: 601 VAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVR--CKVFSD--- 655

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                       + +H   +K GF  D ++ N+L+DMY++ G ++ ++ IF  + +R +V
Sbjct: 656 -----------KEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIV 704

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMK------------------SCGFEPDEVTSINMLV 346
           SWN MI G     +   A+ LL  M+                     F+P+ VT + +L 
Sbjct: 705 SWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLP 764

Query: 347 ACVRSGDIKTGREM-----------------------------------FDSMPSPSVSS 371
            C     +  G+E+                                   FD MP  +V +
Sbjct: 765 GCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVIT 824

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRG------VKPDRTTLAIILSSCAAMGILESGKQ 425
           WN ++ +Y      +EA++LFR M   G      ++P+  T   I ++C+  G+++ G  
Sbjct: 825 WNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEG-- 882

Query: 426 VHAASLKTASH-----IDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIV-CWNSMIA 478
           +H      ASH      D+Y    L+ +  +  R + A  + + +P  L+ V  W+S++ 
Sbjct: 883 LHLFHTMKASHGVEPRGDHYAC--LVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLG 940

Query: 479 GLSLN 483
              ++
Sbjct: 941 ACRIH 945


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/611 (34%), Positives = 330/611 (54%), Gaps = 56/611 (9%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYA--KCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
           ++ H  +IK GL    +  + L+   A    G   +A+ +FE + +PN+  +  M+ G +
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
            +   V A++ +  M+   V  +S +   +L  CA+ G   E                G+
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQE----------------GK 152

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           Q+H   +KLG E+D  +  SL++MYA+NG++  AE++FS    R  VS+  +I GY    
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGY---- 208

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                      ++ C                     +   R +F+ +P     SWNAM++
Sbjct: 209 ----------TLRGC---------------------LDDARRLFEEIPVRDAVSWNAMIA 237

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y+QS   +EA+  F+EM+   V P+ +T+  +LS+CA  G LE G  V +         
Sbjct: 238 GYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGS 297

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           +  + + LI +YSKC   + A  +F  I E DI+ WN MI G S  +   EA   F++M+
Sbjct: 298 NLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ 357

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD--GYVNDIFVGSALIEMYCKCGD 555
           Q+ + P   +F ++L +CA L +   G+ +HA I+K   G  N   + ++LI+MY KCG+
Sbjct: 358 QSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTN-TSLWTSLIDMYAKCGN 416

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           I  A+Q F  M  K+  +WN MI G A +G+ + A+ L++ M   G +PDDITFV +L+A
Sbjct: 417 IEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSA 476

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           CSH+GLV++G + F+SM  D+ + P L HY CMID LGRAG F EAE L+  M  K D  
Sbjct: 477 CSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGA 536

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMS 735
           IW  LL +CR+H NV L + AA+ LF L+P+N   Y LL+NIY++ GRWDD+  +R  ++
Sbjct: 537 IWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLN 596

Query: 736 ENCIVKDPAYS 746
           +  + K P  S
Sbjct: 597 DKGMKKVPGCS 607



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 218/424 (51%), Gaps = 25/424 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H H+L+ GL  D F+   LI +Y++      A+ +F K   +D  S+ A+++    
Sbjct: 151 GKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTL 210

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A +LF+E+P R+ VSWN +I+   ++G  E+AL+ + +M      P   T+ +V
Sbjct: 211 RGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTV 270

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      +E G      +   GL  N+ + NAL+ +Y+KCG    A  +FE + E + 
Sbjct: 271 LSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDI 330

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC-GVESDVFAQ 245
           +++  M+ G +  +   EAL +FR M +  V  + V+  S+L  CA  G   +   + A 
Sbjct: 331 ISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAY 390

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D KF               LG   +  L  SL+DMYAK G++++A+ +F+ +  +S+ S
Sbjct: 391 IDKKF---------------LGL-TNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGS 434

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI+G      +  A+EL ++M+  GFEPD++T + +L AC  +G ++ GR+ F SM 
Sbjct: 435 WNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMV 494

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                SP +  +  M+    ++    EA  L + M+   +KPD      +L +C   G +
Sbjct: 495 EDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNME---MKPDGAIWGSLLGACRVHGNV 551

Query: 421 ESGK 424
           E G+
Sbjct: 552 ELGE 555



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 214/485 (44%), Gaps = 112/485 (23%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H+ I++ GL +  F  ++LIE                               A    
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEF-----------------------------CAISPF 79

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            +L +A  LF+ + + N   WN +I     +     A+  Y +M   G  P   T   + 
Sbjct: 80  GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLL 139

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K+   +   + G++ HG V+K+GL+ + +V  +L+++YA+ G   +A  VF + S  + V
Sbjct: 140 KSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAV 199

Query: 188 TFT-------------------------------AMMSGLAKTDRVVEALEMFRLMIRKA 216
           +FT                               AM++G A++ R  EAL  F+ M R  
Sbjct: 200 SFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN 259

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V+ +  ++ +VL  CA+ G  +E                G  V       G  ++L L N
Sbjct: 260 VAPNESTMVTVLSACAQSG-SLEL---------------GNWVRSWIEDHGLGSNLRLVN 303

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+DMY+K GD+D A  +F  + E+ ++SWNVMI GY       +A+ L ++M+    EP
Sbjct: 304 ALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEP 363

Query: 337 DEVTSINMLVAC------------------------------------VRSGDIKTGREM 360
           ++VT +++L AC                                     + G+I+  +++
Sbjct: 364 NDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQV 423

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F  M   S+ SWNAM+S  +   +   A++LFR+M+  G +PD  T   +LS+C+  G++
Sbjct: 424 FAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLV 483

Query: 421 ESGKQ 425
           E G+Q
Sbjct: 484 ELGRQ 488



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 165/326 (50%), Gaps = 42/326 (12%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL--AERVFHRIPE 467
           +LS+C +    ++ KQ+H+  +KT  H   +  S LI   +      L  A  +F  I +
Sbjct: 38  LLSTCKS---FQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            +   WN+MI G SL+S  + A  F+ +M    + P  ++F  +L SCAK+ ++ +G+Q+
Sbjct: 95  PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGD----------------------IYG------- 558
           H  + K G  +D FV ++LI MY + G+                      I G       
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214

Query: 559 --ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             AR+ F+ +  ++ V+WN MI GYAQ+G  +EA+  +++M  + V P++ T V +L+AC
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           + SG +++G  + + ++ DHG+   L     +ID   + G   +A  L + + C+ D + 
Sbjct: 275 AQSGSLELGNWVRSWIE-DHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGI-CEKDIIS 332

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFR 702
           W V++     H N   + + A  LFR
Sbjct: 333 WNVMIGGYS-HMN---SYKEALALFR 354


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 223/777 (28%), Positives = 398/777 (51%), Gaps = 85/777 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +++ G+  D ++   L+  Y      ++AQ                       
Sbjct: 215 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ----------------------- 251

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   KLF+EMP+ NVVSW +L+     +G   + L+VY +M  EG      T A+V
Sbjct: 252 --------KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV 303

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             +   L D   G +  G +I+ G + ++ VAN+L+S+++     + A  VF+ M+E + 
Sbjct: 304 TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDI 363

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ AM+S  A      E+L  F  M       +S +LSS+              V +  
Sbjct: 364 ISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSL------------LSVCSSV 411

Query: 247 DN-KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           DN K+ R +HG     L +KLG ++++ + N+LL +Y++ G  + AE++F  + ER ++S
Sbjct: 412 DNLKWGRGIHG-----LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLIS 466

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           WN M+A Y Q  +    +++L  +   G   + VT  + L AC                 
Sbjct: 467 WNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALII 526

Query: 350 -------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G +   +++  +MP P   +WNA++  ++++E   EA+K
Sbjct: 527 VAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVK 586

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMG-ILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            ++ ++ +G+  +  T+  +L +C+A   +L+ G  +HA  + T    D+YV + LI +Y
Sbjct: 587 AYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMY 646

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC     +  +F  +     + WN+M+A  + +    EA   F +MR   +   QFSF+
Sbjct: 647 AKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFS 706

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
             L++ A L+   +G+Q+H  + K G+ +D+ V +A ++MY KCG+++   +       +
Sbjct: 707 GGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINR 766

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + ++WN +I  +A++G   +A   + +M+  G KPD +TFV++L+AC+H GLVD G+  +
Sbjct: 767 SRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYY 826

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           +SM  + GV P ++H  C+ID LGR+G    AE  I EMP   + + W  LL++CR+H N
Sbjct: 827 DSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGN 886

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + LA++ AE L  LDP + + Y L +N+ ++ G+W+D+  +R+ M  N I K PA S
Sbjct: 887 LELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACS 943



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 192/741 (25%), Positives = 338/741 (45%), Gaps = 86/741 (11%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           + +AGK LHA  +   +    F  N LI +YSK  N                        
Sbjct: 109 SQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGN------------------------ 144

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                  +E A  +FDEM  RN  SW+ ++S  VR GL E+A+ ++ +M   G  P    
Sbjct: 145 -------IEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFM 197

Query: 123 LASVFKA-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           +AS+  A S +    + G + HG V+K G+  ++YV  AL+  Y   G   +A  +FEEM
Sbjct: 198 VASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM 257

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + N V++T++M G + +    E L +++ M ++ VS +  + ++V        CG+  D
Sbjct: 258 PDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV-----TSSCGLLED 312

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                       V G QV    I+ GFE  + ++NSL+ M++    ++ A  +F ++ E 
Sbjct: 313 -----------QVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC 361

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
            ++SWN MI+ Y       +++     M+    E +  T  ++L  C    ++K GR + 
Sbjct: 362 DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIH 421

Query: 361 ----------------------------------FDSMPSPSVSSWNAMLSSYSQSENHK 386
                                             F +M    + SWN+M++ Y Q     
Sbjct: 422 GLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCL 481

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           + +K+  E+   G   +  T A  L++C+    L   K VHA  +    H    V + L+
Sbjct: 482 DGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALV 541

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y K      A++V   +P+ D V WN++I G + N    EA   +K +R+  +     
Sbjct: 542 TMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYI 601

Query: 507 SFATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           +  +VL +C+      + G  +HA I   G+ +D +V ++LI MY KCGD+  +   FD 
Sbjct: 602 TMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDG 661

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  K+ +TWN M+   A +G G+EA++++ +M   GV  D  +F   L A ++  +++ G
Sbjct: 662 LGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEG 721

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            ++ + + +  G E  L      +D  G+ G  H+   ++ + P     + W +L+S+  
Sbjct: 722 QQL-HGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFA 779

Query: 686 LHANVRLAKRAAEELFRLDPK 706
            H   + A+    E+ +L PK
Sbjct: 780 RHGCFQKARETFHEMLKLGPK 800



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 225/473 (47%), Gaps = 44/473 (9%)

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
           ++ +  + G+ +H   I       +  +N+L++MY+K G+++ A  +F  +  R+  SW+
Sbjct: 105 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 164

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD------------IK 355
            M++GY +     +A+ L  +M   G EP+     +++ AC RSG             +K
Sbjct: 165 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 224

Query: 356 TG------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
           TG                        +++F+ MP  +V SW +++  YS S N  E + +
Sbjct: 225 TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNV 284

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILES---GKQVHAASLKTASHIDNYVASGLIGI 448
           ++ M+  GV  ++ T A + SSC   G+LE    G QV    ++        VA+ LI +
Sbjct: 285 YQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISM 341

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           +S     E A  VF  + E DI+ WN+MI+  + + L  E+   F  MR         + 
Sbjct: 342 FSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTL 401

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           +++LS C+ + +   GR +H  + K G  +++ + + L+ +Y + G    A   F  M  
Sbjct: 402 SSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE 461

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           ++ ++WN M+  Y Q+G   + +++  +++  G   + +TF + L ACS+   + +  +I
Sbjct: 462 RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECL-IESKI 520

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            +++ +  G    L     ++   G+ G   EA+ ++  MP + D V W  L+
Sbjct: 521 VHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALI 572



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 3/171 (1%)

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L   ++++S   G+ +HA          IF  + LI MY K G+I  AR  FD M  +N 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG-LVDVGVEIFN 630
            +W+ M+ GY + G  +EAV L+  M   GV+P+     +++TACS SG + D G ++ +
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQV-H 219

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
              +  G+   +   T ++   G  G  + A+ L +EMP   + V W  L+
Sbjct: 220 GFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 269


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 223/777 (28%), Positives = 398/777 (51%), Gaps = 85/777 (10%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            G  +H  +++ G+  D ++   L+  Y      ++AQ                       
Sbjct: 865  GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ----------------------- 901

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    KLF+EMP+ NVVSW +L+     +G   + L+VY +M  EG      T A+V
Sbjct: 902  --------KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV 953

Query: 127  FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              +   L D   G +  G +I+ G + ++ VAN+L+S+++     + A  VF+ M+E + 
Sbjct: 954  TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDI 1013

Query: 187  VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            +++ AM+S  A      E+L  F  M       +S +LSS+              V +  
Sbjct: 1014 ISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSL------------LSVCSSV 1061

Query: 247  DN-KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            DN K+ R +HG     L +KLG ++++ + N+LL +Y++ G  + AE++F  + ER ++S
Sbjct: 1062 DNLKWGRGIHG-----LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLIS 1116

Query: 306  WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
            WN M+A Y Q  +    +++L  +   G   + VT  + L AC                 
Sbjct: 1117 WNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALII 1176

Query: 350  -------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                               + G +   +++  +MP P   +WNA++  ++++E   EA+K
Sbjct: 1177 VAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVK 1236

Query: 391  LFREMQFRGVKPDRTTLAIILSSCAAMG-ILESGKQVHAASLKTASHIDNYVASGLIGIY 449
             ++ ++ +G+  +  T+  +L +C+A   +L+ G  +HA  + T    D+YV + LI +Y
Sbjct: 1237 AYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMY 1296

Query: 450  SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            +KC     +  +F  +     + WN+M+A  + +    EA   F +MR   +   QFSF+
Sbjct: 1297 AKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFS 1356

Query: 510  TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
              L++ A L+   +G+Q+H  + K G+ +D+ V +A ++MY KCG+++   +       +
Sbjct: 1357 GGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINR 1416

Query: 570  NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
            + ++WN +I  +A++G   +A   + +M+  G KPD +TFV++L+AC+H GLVD G+  +
Sbjct: 1417 SRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYY 1476

Query: 630  NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
            +SM  + GV P ++H  C+ID LGR+G    AE  I EMP   + + W  LL++CR+H N
Sbjct: 1477 DSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGN 1536

Query: 690  VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + LA++ AE L  LDP + + Y L +N+ ++ G+W+D+  +R+ M  N I K PA S
Sbjct: 1537 LELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACS 1593



 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 177/529 (33%), Positives = 270/529 (51%), Gaps = 36/529 (6%)

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G  +H   I  GF +DLHL+  L+  Y K GD+ +A  +F  +PERSVVSW  M++GY 
Sbjct: 48  QGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYS 107

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR----------SGDIKTGR------ 358
           Q  +  KA  L   M+ CG + ++ T  + L AC             G I+ GR      
Sbjct: 108 QNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLF 167

Query: 359 -------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                               +F +M    V SWNAM+  Y+      ++  +FR M   G
Sbjct: 168 VKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGG 227

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           + PD  TL  +L + A  G L    Q+H    +      + V   LI  Y+K      A+
Sbjct: 228 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK 287

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSL-DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            +   + + D+    ++I G +   +  ++A   FK+M Q  +        ++L+ CA L
Sbjct: 288 DLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANL 347

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           +S   G Q+HA   K     D+ +G+ALI+MY K G+I  A++ FD M  KN ++W  +I
Sbjct: 348 ASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLI 407

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GYA++GYG  AV LYK M + G KP+D+TF+++L ACSH+GL   G E FN+M   + +
Sbjct: 408 SGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNI 467

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
           +P  +HY+CM+D   R G   EA  L+ ++  K +  +W  +L +  ++  + L K AA 
Sbjct: 468 KPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAAS 527

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            LF + P+NS  Y +LA+IYS+ G WDD   +R+LM E    K+  YS 
Sbjct: 528 NLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSF 576



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 192/741 (25%), Positives = 338/741 (45%), Gaps = 86/741 (11%)

Query: 3    AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
            + +AGK LHA  +   +    F  N LI +YSK  N                        
Sbjct: 759  SQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGN------------------------ 794

Query: 63   AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                   +E A  +FDEM  RN  SW+ ++S  VR GL E+A+ ++ +M   G  P    
Sbjct: 795  -------IEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFM 847

Query: 123  LASVFKA-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            +AS+  A S +    + G + HG V+K G+  ++YV  AL+  Y   G   +A  +FEEM
Sbjct: 848  VASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM 907

Query: 182  SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
             + N V++T++M G + +    E L +++ M ++ VS +  + ++V        CG+  D
Sbjct: 908  PDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV-----TSSCGLLED 962

Query: 242  VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                        V G QV    I+ GFE  + ++NSL+ M++    ++ A  +F ++ E 
Sbjct: 963  -----------QVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC 1011

Query: 302  SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
             ++SWN MI+ Y       +++     M+    E +  T  ++L  C    ++K GR + 
Sbjct: 1012 DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIH 1071

Query: 361  ----------------------------------FDSMPSPSVSSWNAMLSSYSQSENHK 386
                                              F +M    + SWN+M++ Y Q     
Sbjct: 1072 GLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCL 1131

Query: 387  EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
            + +K+  E+   G   +  T A  L++C+    L   K VHA  +    H    V + L+
Sbjct: 1132 DGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALV 1191

Query: 447  GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
             +Y K      A++V   +P+ D V WN++I G + N    EA   +K +R+  +     
Sbjct: 1192 TMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYI 1251

Query: 507  SFATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +  +VL +C+      + G  +HA I   G+ +D +V ++LI MY KCGD+  +   FD 
Sbjct: 1252 TMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDG 1311

Query: 566  MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
            +  K+ +TWN M+   A +G G+EA++++ +M   GV  D  +F   L A ++  +++ G
Sbjct: 1312 LGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEG 1371

Query: 626  VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
             ++ + + +  G E  L      +D  G+ G  H+   ++ + P     + W +L+S+  
Sbjct: 1372 QQL-HGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFA 1429

Query: 686  LHANVRLAKRAAEELFRLDPK 706
             H   + A+    E+ +L PK
Sbjct: 1430 RHGCFQKARETFHEMLKLGPK 1450



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 206/459 (44%), Gaps = 83/459 (18%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           KKA   G L+H H++ NG   D  L  +LI  Y K  +  +A+++FD             
Sbjct: 43  KKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDG------------ 90

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
                              MPER+VVSW  ++S   +NG  EKA  +++ M + G     
Sbjct: 91  -------------------MPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQ 131

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T  S  +A T+L  ++ G +  G + K    +N++V +AL+  ++KCG  + A  +F  
Sbjct: 132 FTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGT 191

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M E + V++ AM+ G A      ++  MFR M+R  +  D  +L SVL   A EG G+  
Sbjct: 192 MMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASA-EGGGL-- 248

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                        +   Q+H +  +LG+ +   ++  L++ YAKNG + SA+ +   + +
Sbjct: 249 -------------IIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLK 295

Query: 301 RSVVSWNVMIAGYGQK-YQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------- 348
           + + S   +I GY  +   S  A++L + M       D+V   +ML  C           
Sbjct: 296 KDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQ 355

Query: 349 ------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                    +SG+I+  +  FD M   +V SW +++S Y++   
Sbjct: 356 IHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGY 415

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
              A+ L+++M+ +G KP+  T   +L +C+  G+   G
Sbjct: 416 GHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEG 454



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 237/523 (45%), Gaps = 54/523 (10%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           ++++  +A++    K   +E A  LF  M ER+VVSWN +I      G  + +  ++  M
Sbjct: 164 ENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSM 223

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
              G VP   TL SV +AS     +    + HG++ ++G      V   L++ YAK G  
Sbjct: 224 LRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSL 283

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTD-RVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
           + A  + + M + +  + TA+++G A      V+AL++F+ M +  + +D V L S+L +
Sbjct: 284 RSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNI 343

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CA                  +    G Q+H   +K     D+ + N+L+DMYAK+G+++ 
Sbjct: 344 CA----------------NLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIED 387

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A+  F  + E++V+SW  +I+GY +      A+ L ++M+S GF+P++VT +++L AC  
Sbjct: 388 AKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSH 447

Query: 351 SGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           +G    G E F++M +     P    ++ M+  +++    +EA  L  ++    +K + +
Sbjct: 448 TGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKID---IKHNAS 504

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHID-NYVASGLIGIYSKCQ--------RNE 456
               IL + +  G +  GK+  +           NYV   L  IYS           R  
Sbjct: 505 LWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVV--LASIYSAAGLWDDAWKIRKL 562

Query: 457 LAERVFHR-------------IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           + ER   +             IP L +      ++    N LD  A     +  Q E +P
Sbjct: 563 MEERSTKKNAGYSFFQATKKSIPLLQV---QHGVSRRDFNILDFGAIFLSNRTPQEECFP 619

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
             F         + +  S   R V  Q+  +  V+   VGSAL
Sbjct: 620 DTFVLEPSFLPPSAVWKSSDHRSV--QLNGNLTVSVDEVGSAL 660



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 6/287 (2%)

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA+KL      R    D +    IL  C      + G  +H   +      D ++ + LI
Sbjct: 16  EALKLLSSNPTR---LDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLI 72

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
             Y K      A  VF  +PE  +V W +M++G S N    +AF+ F  MR   +   QF
Sbjct: 73  IFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQF 132

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++ + L +C  L     G QV   I+K  +V ++FV SAL++ + KCG +  A   F  M
Sbjct: 133 TYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTM 192

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++ V+WN MI GYA  G+ D++  +++ M+  G+ PD  T  ++L A +  G + +  
Sbjct: 193 MERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIAN 252

Query: 627 EIFNSM-QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           +I   + QL +G   I+     +I+   + G    A+ L   M  KD
Sbjct: 253 QIHGIITQLGYGSYDIVT--GLLINAYAKNGSLRSAKDLRKGMLKKD 297



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 164/726 (22%), Positives = 287/726 (39%), Gaps = 87/726 (11%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI----LSAQCKSDD 69
           +LR GL  D +    ++   ++      A  +   +      S++ +    ++A  K+  
Sbjct: 223 MLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGS 282

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEE-KALSVYNKMSNEGFVPTHITLASVFK 128
           L  A  L   M ++++ S   LI+     G+    AL ++ +M+        + L S+  
Sbjct: 283 LRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLN 342

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
               L     G + H   +K     ++ + NAL+ +YAK G  + A   F+EM E N ++
Sbjct: 343 ICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVIS 402

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSD 247
           +T+++SG AK      A+ +++ M  K    + V+  S+L  C+  G   E  + F    
Sbjct: 403 WTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMV 462

Query: 248 NKFSRNVHGQQVHC----------------LTIKLGFEADLHLSNSLLDMYAKNGDM--- 288
           NK++     +   C                L  K+  + +  L  ++L   +  G M   
Sbjct: 463 NKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLG 522

Query: 289 -DSAEVIFSNLPERSVV----------------SWNVMI----------AGYGQKYQSTK 321
            ++A  +F+  PE SV                 +W +            AGY     + K
Sbjct: 523 KEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKK 582

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS--PSVSSWNAMLSSY 379
           +I LLQ           +     +    R+   +   + F   PS  P  + W       
Sbjct: 583 SIPLLQVQHGVSRRDFNILDFGAIFLSNRTPQEECFPDTFVLEPSFLPPSAVW------- 635

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV--HAASLKTASHI 437
            +S +H       R +Q  G   + T     + S   M  +E  K V  H    + A   
Sbjct: 636 -KSSDH-------RSVQLNG---NLTVSVDEVGSALGMRQVEKPKTVGSHTGQKQWAPVS 684

Query: 438 DNYVASGLIGIYSKCQRNEL-AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
               AS LI        NE   E    ++ + D+   N+          DI A +F +Q 
Sbjct: 685 TITTASALI--------NETPVENFAEQVKDDDLKTSNAGSRRWGCLDGDI-AKVFLQQQ 735

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
             +       +    L   ++++S   G+ +HA          IF  + LI MY K G+I
Sbjct: 736 HTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNI 795

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             AR  FD M  +N  +W+ M+ GY + G  +EAV L+  M   GV+P+     +++TAC
Sbjct: 796 EHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITAC 855

Query: 617 SHSG-LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           S SG + D G ++ +   +  G+   +   T ++   G  G  + A+ L +EMP   + V
Sbjct: 856 SRSGYMADEGFQV-HGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVV 913

Query: 676 IWEVLL 681
            W  L+
Sbjct: 914 SWTSLM 919


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 211/672 (31%), Positives = 352/672 (52%), Gaps = 61/672 (9%)

Query: 116 FVPTHITLASVFKASTALL-----DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           F+P+H     V++  +A+L      ++   +   L+IK G          L+SL+ K   
Sbjct: 37  FIPSH-----VYRHPSAILLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNS 91

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              A  VFE +    +V +  M+ G AK   + +A+  +  M    V       + +L +
Sbjct: 92  ITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQL 151

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
                 G   D+             G+++H + I  GF+++L    +++++YAK   ++ 
Sbjct: 152 S-----GENLDL-----------RRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIED 195

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV- 349
           A  +F  +P+R +VSWN ++AGY Q   + +A++++ +M+  G +PD +T +++L A   
Sbjct: 196 AYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVAD 255

Query: 350 ----------------------------------RSGDIKTGREMFDSMPSPSVSSWNAM 375
                                             + G +++ R +F  M S +V SWN M
Sbjct: 256 LKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTM 315

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +  Y+Q+   +EA   F +M   GV+P   ++   L +CA +G LE G+ VH    +   
Sbjct: 316 IDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKI 375

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
             D  V + LI +YSKC+R ++A  VF  +    +V WN+MI G + N    EA   F +
Sbjct: 376 GFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCE 435

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M+ +++ P  F+  +V+++ A LS + Q + +H    +     ++FV +ALI+ + KCG 
Sbjct: 436 MQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGA 495

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           I  AR+ FD+M  ++ +TWN MI GY  NG+G EA+ L+ +M    VKP++ITF++++ A
Sbjct: 496 IQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAA 555

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           CSHSGLV+ G+  F SM+ ++G+EP +DHY  M+D LGRAG   +A   I +MP K    
Sbjct: 556 CSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGIT 615

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMS 735
           +   +L +CR+H NV L ++ A+ELF LDP +   + LLAN+Y+S   WD +  VR  M 
Sbjct: 616 VLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAME 675

Query: 736 ENCIVKDPAYSL 747
           +  I K P  SL
Sbjct: 676 KKGIQKTPGCSL 687



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 162/649 (24%), Positives = 285/649 (43%), Gaps = 119/649 (18%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           I++NG +++     +LI L+ K N+   A  +F+ + HK                     
Sbjct: 67  IIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHK--------------------- 105

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
               D       V ++ ++    +N     A+  Y +M  +  +P       + + S   
Sbjct: 106 ---LD-------VLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGEN 155

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           LD+  GR  HG+VI  G   N++   A+++LYAKC   + A  +FE M + + V++  ++
Sbjct: 156 LDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVV 215

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           +G A+      A+++   M       DS++L SVL   A              D K  R 
Sbjct: 216 AGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVA--------------DLKALRI 261

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+ +H    + GFE  ++++ ++LD Y K G + SA ++F  +  R+VVSWN MI GY
Sbjct: 262 --GRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGY 319

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--------------- 358
            Q  +S +A     +M   G EP  V+ +  L AC   GD++ GR               
Sbjct: 320 AQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDV 379

Query: 359 --------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                                +F ++   +V +WNAM+  Y+Q+    EA+ LF EMQ  
Sbjct: 380 SVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSH 439

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
            +KPD  TL  ++++ A + +    K +H  +++T    + +V + LI  ++KC   + A
Sbjct: 440 DIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTA 499

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            ++F  + E  ++ WN+MI G   N    EA   F +M+   + P + +F +V+++C+  
Sbjct: 500 RKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACS-- 557

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC--KCGDIYGARQFFDMMHGKNTVTWNE 576
                    H+ + ++G    ++   ++ E Y      D YGA                 
Sbjct: 558 ---------HSGLVEEG----MYYFESMKENYGLEPTMDHYGA----------------- 587

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           M+    + G  D+A +  +DM    VKP      A+L AC     V++G
Sbjct: 588 MVDLLGRAGRLDDAWKFIQDM---PVKPGITVLGAMLGACRIHKNVELG 633



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 202/454 (44%), Gaps = 86/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  ++ NG   + F    ++ LY+KC     A  +F++MP +D+ SWN +      
Sbjct: 161 GREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTV------ 214

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    ++   +NG   +A+ V  +M   G  P  ITL SV
Sbjct: 215 -------------------------VAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSV 249

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L  +  GR  HG   + G +  + VA A+L  Y KCG  + A  VF+ MS  N 
Sbjct: 250 LPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNV 309

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M+ G A+     EA   F  M+ + V   +VS+   L  CA  G           
Sbjct: 310 VSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLG----------- 358

Query: 247 DNKFSRNVHGQQVHCL--TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                R   G+ VH L    K+GF  D+ + NSL+ MY+K   +D A  +F NL  ++VV
Sbjct: 359 --DLER---GRYVHRLLDEKKIGF--DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVV 411

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           +WN MI GY Q     +A+ L   M+S   +PD  T ++++ A                 
Sbjct: 412 TWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLA 471

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + G I+T R++FD M    V +WNAM+  Y  + + +EA+
Sbjct: 472 IRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREAL 531

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            LF EMQ   VKP+  T   ++++C+  G++E G
Sbjct: 532 DLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEG 565



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 203/432 (46%), Gaps = 59/432 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H +  R G      +   +++ Y KC +  SA+ +F  M  +++ SWN   
Sbjct: 257 KALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNT-- 314

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                        +I    +NG  E+A + + KM +EG  PT++
Sbjct: 315 -----------------------------MIDGYAQNGESEEAFATFLKMLDEGVEPTNV 345

Query: 122 TLASVFKASTALLDVEHGRRCHGLV--IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           ++     A   L D+E GR  H L+   KIG D  + V N+L+S+Y+KC     A  VF 
Sbjct: 346 SMMGALHACANLGDLERGRYVHRLLDEKKIGFD--VSVMNSLISMYSKCKRVDIAASVFG 403

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            +     VT+ AM+ G A+   V EAL +F  M    +  DS +L SV            
Sbjct: 404 NLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSV------------ 451

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
             + A +D   +R    + +H L I+   + ++ +  +L+D +AK G + +A  +F  + 
Sbjct: 452 --ITALADLSVTR--QAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQ 507

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           ER V++WN MI GYG      +A++L   M++   +P+E+T ++++ AC  SG ++ G  
Sbjct: 508 ERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMY 567

Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
            F+SM       P++  + AM+    ++    +A K  ++M    VKP  T L  +L +C
Sbjct: 568 YFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMP---VKPGITVLGAMLGAC 624

Query: 415 AAMGILESGKQV 426
                +E G++ 
Sbjct: 625 RIHKNVELGEKT 636



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 168/374 (44%), Gaps = 37/374 (9%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+   N+++S   K   ++ A  +F  +  + VV+WN +I    +NG   +AL+++ +M 
Sbjct: 378 DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQ 437

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           +    P   TL SV  A   L      +  HGL I+  +DKN++V  AL+  +AKCG  +
Sbjct: 438 SHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQ 497

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +F+ M E + +T+ AM+ G        EAL++F  M   +V  + ++  SV+  C+
Sbjct: 498 TARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACS 557

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G   E   + +S               +    G E  +    +++D+  + G +D A 
Sbjct: 558 HSGLVEEGMYYFES---------------MKENYGLEPTMDHYGAMVDLLGRAGRLDDAW 602

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF--EPDE----VTSINMLV 346
               ++P +  ++  V+ A  G   +  K +EL ++     F  +PD+    V   NM  
Sbjct: 603 KFIQDMPVKPGIT--VLGAMLG-ACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYA 659

Query: 347 ACV---RSGDIKTGREMFDSMPSPS---VSSWNAMLSSYSQSENHKEAIKLFR------- 393
           +     +   ++T  E      +P    V   N + + YS S NH ++ +++        
Sbjct: 660 SASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGD 719

Query: 394 EMQFRGVKPDRTTL 407
           EM+  G  PD  ++
Sbjct: 720 EMKAAGYVPDTNSI 733


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 210/622 (33%), Positives = 337/622 (54%), Gaps = 76/622 (12%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH------AVPVFEEMSEPNEVTFTAMM 193
           R  H  +IK GL    Y  + LL L   C  + H      A+ VFE + EPN + +  M 
Sbjct: 50  RLIHAQMIKTGLHNTNYALSKLLEL---CVISPHFDGLPYAISVFETIQEPNLLIWNTMF 106

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            G A +   V AL+++  MI   +  +S +   +L  CA+      S  F +        
Sbjct: 107 RGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK------SKAFKE-------- 152

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             GQQ+H   +KLG++ DL +  SL+ +Y +NG ++ A  +F   P R VVS+  +I GY
Sbjct: 153 --GQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGY 210

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
             +                                   G I++ +++FD +P   V SWN
Sbjct: 211 ASR-----------------------------------GYIESAQKLFDEIPVKDVVSWN 235

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           AM+S Y+++ N+KEA++LF+EM    ++PD +T+  ++S+CA  G +E G+QVH      
Sbjct: 236 AMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVH------ 289

Query: 434 ASHIDNY-------VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
            S ID++       + + L+ +YSKC   E A  +F  +   D++ WN++I G +  +L 
Sbjct: 290 -SWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLY 348

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK--DGYVNDIFVGS 544
            EA + F++M ++   P   +  ++L +CA L +   GR +H  I+K      N   + +
Sbjct: 349 KEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRT 408

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
           +LI+MY KCGDI  A Q F+ +  K+  +WN MI G+A +G  D A  ++  M   G++P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEP 468

Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEML 664
           DDITFV +L+ACS SG++D+G  IF +M  D+ + P L+HY CMID LG +G F EAE +
Sbjct: 469 DDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 528

Query: 665 IDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRW 724
           I+ M  + D VIW  LL +C++  NV L +  A+ L +++P+N   Y LL+NIY++ GRW
Sbjct: 529 INNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRW 588

Query: 725 DDLRAVRELMSENCIVKDPAYS 746
           +++  +R L+++  + K P  S
Sbjct: 589 NEVAKIRALLNDKGMKKVPGCS 610



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 217/431 (50%), Gaps = 28/431 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H H+L+ G   D F+   LI +Y +      A+ +FD+ PH+D+ S+ A++
Sbjct: 148 KAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALI 207

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   +E A KLFDE+P ++VVSWN +IS     G  ++AL ++ +M      P   
Sbjct: 208 KGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDES 267

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ +V  A      +E GR+ H  +   G   N+ + N+L+ LY+KCG  + A  +FE +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGL 327

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC---GV 238
              + +++  ++ G    +   EAL +F+ M+R     + V++ S+L  CA  G    G 
Sbjct: 328 LYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGR 387

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
              V+     K + N                    L  SL+DMYAK GD+++A  +F+++
Sbjct: 388 WIHVYIDKRLKSATNASS-----------------LRTSLIDMYAKCGDIEAAHQVFNSI 430

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
             +S+ SWN MI G+    ++  A ++  RM+  G EPD++T + +L AC RSG +  GR
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGR 490

Query: 359 EMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
            +F +M      +P +  +  M+     S   KEA ++   M+   ++PD      +L +
Sbjct: 491 HIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNME---MEPDGVIWCSLLKA 547

Query: 414 CAAMGILESGK 424
           C   G +E G+
Sbjct: 548 CKIRGNVELGE 558



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 221/487 (45%), Gaps = 112/487 (22%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           +L+HA +++ GL +  +  ++L+EL   C  +          PH                
Sbjct: 50  RLIHAQMIKTGLHNTNYALSKLLEL---CVIS----------PH---------------F 81

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D L +A  +F+ + E N++ WN +      +     AL +Y  M + G +P   T   + 
Sbjct: 82  DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLL 141

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL----------------------- 164
           K+       + G++ HG V+K+G D +++V  +L+S+                       
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVV 201

Query: 165 --------YAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
                   YA  G+ + A  +F+E+   + V++ AM+SG A+T    EALE+F+ M++  
Sbjct: 202 SYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTN 261

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           +  D  ++ +V+  CA+ G  +E                G+QVH      GF ++L + N
Sbjct: 262 IRPDESTMVTVVSACAQSG-SIEL---------------GRQVHSWIDDHGFGSNLKIVN 305

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           SL+D+Y+K G++++A  +F  L  + V+SWN +I GY       +A+ L Q M   G  P
Sbjct: 306 SLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERP 365

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           ++VT +++L AC                                      + GDI+   +
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQ 425

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F+S+   S+SSWNAM+  ++       A  +F  M+  G++PD  T   +LS+C+  G+
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGM 485

Query: 420 LESGKQV 426
           L+ G+ +
Sbjct: 486 LDLGRHI 492



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 12/232 (5%)

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG---ARQFFDMM 566
           ++L +C  L S    R +HAQ+ K G  N  +  S L+E+        G   A   F+ +
Sbjct: 38  SLLHNCKTLQSL---RLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETI 94

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
              N + WN M  G+A +     A++LY  MI+ G+ P+  TF  +L +C+ S     G 
Sbjct: 95  QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQ 154

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           +I   + L  G +  L  +T +I    + G   +A  + D  P + D V +  L+     
Sbjct: 155 QIHGHV-LKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHR-DVVSYTALIKGYAS 212

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDD-LRAVRELMSEN 737
              +  A++  +E   +  K+   ++ + + Y+  G + + L   +E+M  N
Sbjct: 213 RGYIESAQKLFDE---IPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTN 261


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 224/713 (31%), Positives = 375/713 (52%), Gaps = 57/713 (7%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A K+F+EMP+RNVVSW +L+ +   NG +++ ++ Y +M +EG       +A V  +   
Sbjct: 113 AQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGF 172

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           L+D+  G +  G  +K GL+  +  AN+L+ ++  CG    A  +F EM+E + +++ ++
Sbjct: 173 LMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSI 232

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           +S  A+     E+   F  M      I+  +LS +L +C         D       K+ +
Sbjct: 233 ISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICG------SVDYL-----KWGK 281

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
            VHG     L +K G E+++ L N+LL +Y+  G    AE+IF  +PER ++SWN M+A 
Sbjct: 282 GVHG-----LAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLAC 336

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-----RSGDIKTG---------- 357
           Y Q  +   A+++   M     E + VT  + L AC+      +G I  G          
Sbjct: 337 YVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDE 396

Query: 358 --------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAI---KLFRE 394
                               +++F  MP     +WNA++  ++ +    EA+   KL RE
Sbjct: 397 LIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMRE 456

Query: 395 MQFRGVKPDRTTLAIILSSCAAM-GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
               GV  D  T+  IL SC     +++ G  +HA ++ T   +D +V S LI +Y+KC 
Sbjct: 457 GSTSGV--DYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCG 514

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
               +  +F ++       WN++IA  +      EA     +MR   +   QF+F+T LS
Sbjct: 515 DLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALS 574

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
             A L+   +G+Q+H    K G+  D F+ +A ++MY KCG++  A +       ++ ++
Sbjct: 575 VAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLS 634

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN +I   A++G   +A   + DM+  GVKP+ ++FV +L+ACSH GLVD G+  + SM 
Sbjct: 635 WNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMT 694

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
             +G++P ++H  CMID LGR+G   EAE  I EMP   + ++W  LL+SCR++ N+ L 
Sbjct: 695 SVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLG 754

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++AA+ L  LDP + + Y L +N+++++GRW+D+  VR  M  + I K PA+S
Sbjct: 755 RKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHS 807



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 176/682 (25%), Positives = 311/682 (45%), Gaps = 62/682 (9%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   + +A  +FD M ERN  SWN+++S  VR G   +A+  +  +   G  P+   +AS
Sbjct: 4   KFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIAS 63

Query: 126 VFKA-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +  A + + +  + G + HG  IK GL  +++V  + +  YA  G   +A  +F EM + 
Sbjct: 64  LVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDR 123

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++T++M   +      E +  ++ M  + +  +  +++ V+       CG   D+  
Sbjct: 124 NVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVI-----SSCGFLMDI-- 176

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                    + G Q+    +K G E  +  +NSL+ M+   GD++ A  IF+ + ER  +
Sbjct: 177 ---------ILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTI 227

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD----------- 353
           SWN +I+   Q     ++      M+    E    T++++L++   S D           
Sbjct: 228 SWNSIISANAQNTLHEESFRYFHWMRLV-HEEINYTTLSILLSICGSVDYLKWGKGVHGL 286

Query: 354 -IKTGRE------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
            +K G E                        +F  MP   + SWN+ML+ Y Q      A
Sbjct: 287 AVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCA 346

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           +K+F EM +   + +  T    L++C       +GK +H   +      +  + + LI  
Sbjct: 347 LKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITF 406

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF-S 507
           Y KC +   A++VF R+P+LD V WN++I G + N+   EA   FK MR+       + +
Sbjct: 407 YGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYIT 466

Query: 508 FATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
              +L SC       + G  +HA     G+  D  V S+LI MY KCGD++ +   FD +
Sbjct: 467 IVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQL 526

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             K +  WN +I   A+ G+G+EA++L   M ++G++ D   F   L+  +   +++ G 
Sbjct: 527 VFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQ 586

Query: 627 EIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           ++  S  +  G E  LDH+     +D  G+ G   +A  ++ + P     + W  L+S  
Sbjct: 587 QLHGS-TIKLGFE--LDHFIINAAMDMYGKCGELDDALRILPQ-PTDRSRLSWNTLISIS 642

Query: 685 RLHANVRLAKRAAEELFRLDPK 706
             H     AK    ++ +L  K
Sbjct: 643 ARHGQFHKAKETFHDMLKLGVK 664



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 263/564 (46%), Gaps = 68/564 (12%)

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y+K G   +A  VF+ MSE NE ++  MMSG  +    VEA+  FR +    +      
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
           ++S++  C +      S + A+          G Q H   IK G   D+ +  S +  YA
Sbjct: 61  IASLVTACNK------SSIMAKE---------GFQFHGFAIKCGLIYDVFVGTSFVHFYA 105

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK------------- 330
             G + +A+ +F+ +P+R+VVSW  ++  Y       + I   +RM+             
Sbjct: 106 SYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIAL 165

Query: 331 ---SCGFEPD------------------EVTSINMLVACVRS-GDIKTGREMFDSMPSPS 368
              SCGF  D                  +V++ N L+      GDI     +F+ M    
Sbjct: 166 VISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERD 225

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
             SWN+++S+ +Q+  H+E+ + F  M+    + + TTL+I+LS C ++  L+ GK VH 
Sbjct: 226 TISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHG 285

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
            ++K     +  + + L+ +YS   R++ AE +F R+PE D++ WNSM+A    +   + 
Sbjct: 286 LAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLC 345

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIE 548
           A   F +M   +      +F + L++C        G+ +H  +   G  +++ +G+ LI 
Sbjct: 346 ALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLIT 405

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM---IASGVKPD 605
            Y KC  +  A++ F  M   + VTWN +I G+A N   +EAV  +K M     SGV  D
Sbjct: 406 FYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGV--D 463

Query: 606 DITFVAILTAC-SHSGLVDVGVEI-----FNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
            IT V IL +C +H  L+  G+ I          LD  V+      + +I    + G  H
Sbjct: 464 YITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQ------SSLITMYAKCGDLH 517

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSS 683
            +  + D++  K   V W  ++++
Sbjct: 518 SSSYIFDQLVFKTSSV-WNAIIAA 540



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/549 (23%), Positives = 251/549 (45%), Gaps = 84/549 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G  L  H L+ GL       N LI ++  C + + A  +F++M  +D  SWN+I+SA 
Sbjct: 177 ILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISAN 236

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            ++   E +++ F          W  L+   +                       + TL+
Sbjct: 237 AQNTLHEESFRYFH---------WMRLVHEEI----------------------NYTTLS 265

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            +     ++  ++ G+  HGL +K GL+ NI + N LLS+Y+  G +K A  +F  M E 
Sbjct: 266 ILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPER 325

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + +++ +M++   +  R + AL++F  M+     I+ V+ +S L  C             
Sbjct: 326 DLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACL------------ 373

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
             D +F  N  G+ +H   + LG + +L + N+L+  Y K   M  A+ +F  +P+   V
Sbjct: 374 --DPEFFTN--GKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKV 429

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMK-----------------SC--------------- 332
           +WN +I G+    +  +A+   + M+                 SC               
Sbjct: 430 TWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHA 489

Query: 333 -----GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                GF+ D+    +++    + GD+ +   +FD +   + S WNA++++ ++    +E
Sbjct: 490 HTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEE 549

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+KL   M+  G++ D+   +  LS  A + +LE G+Q+H +++K    +D+++ +  + 
Sbjct: 550 ALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMD 609

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y KC   + A R+  +  +   + WN++I+  + +    +A   F  M +  + P   S
Sbjct: 610 MYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVS 669

Query: 508 FATVLSSCA 516
           F  +LS+C+
Sbjct: 670 FVCLLSACS 678



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 186/427 (43%), Gaps = 59/427 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK+LH  ++  GL D+  + N LI  Y KC+    A+                       
Sbjct: 381 GKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAK----------------------- 417

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT--HITLA 124
                   K+F  MP+ + V+WN LI     N    +A++ + K+  EG      +IT+ 
Sbjct: 418 --------KVFQRMPKLDKVTWNALIGGFANNAELNEAVAAF-KLMREGSTSGVDYITIV 468

Query: 125 SVFKASTALLD-VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           ++  +     D +++G   H   +  G D + +V ++L+++YAKCG    +  +F+++  
Sbjct: 469 NILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVF 528

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
                + A+++  A+     EAL++   M    +  D  + S+ L V A           
Sbjct: 529 KTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAA----------- 577

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                  +    GQQ+H  TIKLGFE D  + N+ +DMY K G++D A  I     +RS 
Sbjct: 578 -----DLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSR 632

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           +SWN +I+   +  Q  KA E    M   G +P+ V+ + +L AC   G +  G   + S
Sbjct: 633 LSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYAS 692

Query: 364 MPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           M S     P +     M+    +S    EA     EM    + P+      +L+SC    
Sbjct: 693 MTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMP---IPPNDLVWRSLLASCRIYR 749

Query: 419 ILESGKQ 425
            L+ G++
Sbjct: 750 NLDLGRK 756


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/647 (32%), Positives = 345/647 (53%), Gaps = 56/647 (8%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT-FTAMMSGLA 197
           G+  H  ++ +GL  NI +  +L++LY  C   + A  VF+ +  P ++T +  +M+   
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273

Query: 198 KTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           K    +E LE+F RL+    +  D+ +  SVL  C+  G                R  +G
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG----------------RVGYG 317

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           + VH   IK GF  D+ + +S + MYAK    + A  +F  +PER V SWN +I+ Y Q 
Sbjct: 318 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 377

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------------- 360
            Q  KA+EL + MK  GF+PD VT   ++ +C R  D++ G+E+                
Sbjct: 378 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 437

Query: 361 -------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                              F+ +   +V SWN+M++ YS   + K  I+LFR M   G++
Sbjct: 438 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 497

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P  TTL+ IL +C+    L+ GK +H   ++     D +V S LI +Y KC     AE V
Sbjct: 498 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 557

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F  +P+ ++V WN MI+G       +EA + F  MR+  + P   +F +VL +C++L+  
Sbjct: 558 FQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 617

Query: 522 FQGRQVHA-QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
            +G+++H   IE    +N++ +G AL++MY KCG +  A   F+ +  ++ V+W  MI  
Sbjct: 618 EKGKEIHNFIIESKLEINEVVMG-ALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 676

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           Y  +G   EA++L++ M  S  KPD +TF+AIL+ACSH+GLVD G   FN M  ++G +P
Sbjct: 677 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 736

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMP-CKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
            ++HY+C+ID LGR G   EA  ++   P  ++D  +   L S+C LH  + L ++    
Sbjct: 737 AVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRL 796

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L   DP + + Y +L+N+Y+S+ +WD++R VR  + E  + K+P  S
Sbjct: 797 LIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCS 843



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 159/546 (29%), Positives = 270/546 (49%), Gaps = 82/546 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKL+H  I+  GL ++  LC  LI LY  C+   SA+ +F  +                 
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTI----------------- 256

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLAS 125
                       E P  ++  WN L++A  +N +  + L V++++ +  ++ P   T  S
Sbjct: 257 ------------ENP-LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPS 303

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA + L  V +G+  H  VIK G   ++ V ++ + +YAKC   + A+ +F+EM E +
Sbjct: 304 VLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERD 363

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             ++  ++S   +  +  +ALE+F  M       DSV+L++V+  CAR            
Sbjct: 364 VASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCAR------------ 411

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+++H   ++ GF  D  +S++L+DMY K G ++ A+ +F  +  ++VVS
Sbjct: 412 ----LLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVS 467

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS-------------- 351
           WN MIAGY  K  S   IEL +RM   G  P   T  ++L+AC RS              
Sbjct: 468 WNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYII 527

Query: 352 ---------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                G+I +   +F +MP  +V SWN M+S Y +  ++ EA+ 
Sbjct: 528 RNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALV 587

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +F +M+  GVKPD  T   +L +C+ + +LE GK++H   +++   I+  V   L+ +Y+
Sbjct: 588 IFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYA 647

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   + A  +F+++PE D V W SMIA    +    EA   F++M+Q++  P + +F  
Sbjct: 648 KCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLA 707

Query: 511 VLSSCA 516
           +LS+C+
Sbjct: 708 ILSACS 713



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 249/503 (49%), Gaps = 93/503 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H H++++G   D  + +  + +Y+KCN                             
Sbjct: 317 GKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNV---------------------------- 348

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               E A KLFDEMPER+V SWNN+IS   ++G  EKAL ++ +M   GF P  +TL +V
Sbjct: 349 ---FEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTV 405

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             +   LLD+E G+  H  +++ G   + +V++AL+ +Y KCG  + A  VFE++   N 
Sbjct: 406 ISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNV 465

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +M++G +        +E+FR M  + +     +LSS+L  C+R             
Sbjct: 466 VSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSR------------- 512

Query: 247 DNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
               S N+  G+ +H   I+   EAD+ +++SL+D+Y K G++ SAE +F N+P+ +VVS
Sbjct: 513 ----SVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVS 568

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
           WNVMI+GY +     +A+ +   M+  G +PD +T  ++L AC +   ++ G+E      
Sbjct: 569 WNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFII 628

Query: 360 -----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +F+ +P     SW +M+++Y       EA+K
Sbjct: 629 ESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALK 688

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG-----KQVHAASLKTASHIDNYVASGL 445
           LF +MQ    KPD+ T   ILS+C+  G+++ G     + +     K A  +++Y  S L
Sbjct: 689 LFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPA--VEHY--SCL 744

Query: 446 IGIYSKCQRNELAERVFHRIPEL 468
           I +  +  R   A  +  R P++
Sbjct: 745 IDLLGRVGRLREAYEILQRTPDI 767


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 218/702 (31%), Positives = 361/702 (51%), Gaps = 56/702 (7%)

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
           +R+V   N  +     +G  E A+ +          P   TL SV +       ++ G+ 
Sbjct: 58  DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
               +   G   +  + + L  +Y  CG  K A  VF+E+     + +  +M+ LAK+  
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG-QQVH 260
              ++ +F+ M+   V +DS + S V            S  F+       R+VHG +Q+H
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCV------------SKSFSSL-----RSVHGGEQLH 218

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
              +K GF     + NSL+  Y KN  +DSA  +F  + ER V+SWN +I GY     + 
Sbjct: 219 GFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRS----------------------------- 351
           K + +  +M   G E D  T +++   C  S                             
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338

Query: 352 ------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                 GD+ + + +F  M   SV S+ +M++ Y++     EA+KLF EM+  G+ PD  
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T+  +L+ CA   +L+ GK+VH    +     D +V++ L+ +Y+KC   + AE VF  +
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 458

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY-PTQFSFATVLSSCAKLSSSFQG 524
              DI+ WN++I G S N    EA   F  + + + + P + + A VL +CA LS+  +G
Sbjct: 459 RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           R++H  I ++GY +D  V ++L++MY KCG +  A   FD +  K+ V+W  MI GY  +
Sbjct: 519 REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMH 578

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G+G EA+ L+  M  +G++ D+I+FV++L ACSHSGLVD G   FN M+ +  +EP ++H
Sbjct: 579 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 638

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y C++D L R G   +A   I+ MP   D  IW  LL  CR+H +V+LA++ AE++F L+
Sbjct: 639 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 698

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           P+N+  Y L+ANIY+   +W+ ++ +R+ + +  + K+P  S
Sbjct: 699 PENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 261/551 (47%), Gaps = 56/551 (10%)

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
           DL+ A ++FDE+     + WN L++ L ++G    ++ ++ KM + G      T + V K
Sbjct: 144 DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSK 203

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           + ++L  V  G + HG ++K G  +   V N+L++ Y K      A  VF+EM+E + ++
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           + ++++G        + L +F  M+   + ID  ++ SV   CA                
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD--------------- 308

Query: 249 KFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
             SR +  G+ VH + +K  F  +    N+LLDMY+K GD+DSA+ +F  + +RSVVS+ 
Sbjct: 309 --SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYT 366

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR----------------- 350
            MIAGY ++  + +A++L + M+  G  PD  T   +L  C R                 
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 426

Query: 351 ------------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                              G ++    +F  M    + SWN ++  YS++    EA+ LF
Sbjct: 427 DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF 486

Query: 393 R-EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
              ++ +   PD  T+A +L +CA++   + G+++H   ++     D +VA+ L+ +Y+K
Sbjct: 487 NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 546

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C    LA  +F  I   D+V W  MIAG  ++    EA   F QMRQ  +   + SF ++
Sbjct: 547 CGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMMH-GK 569
           L +C+      +G +    +  +  +       A +++M  + GD+  A +F + M    
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP 666

Query: 570 NTVTWNEMIHG 580
           +   W  ++ G
Sbjct: 667 DATIWGALLCG 677



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 209/456 (45%), Gaps = 87/456 (19%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ LH  IL++G  +   + N L+  Y K     SA+                      
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSAR---------------------- 250

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                    K+FDEM ER+V+SWN++I+  V NGL EK LSV+ +M   G      T+ S
Sbjct: 251 ---------KVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           VF        +  GR  H + +K    +     N LL +Y+KCG    A  VF EMS+ +
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T+M++G A+     EA+++F  M  + +S D  ++++VL  CAR            
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR------------ 409

Query: 246 SDNKFSRNVHGQQVHCLTIK--LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
               +     G++VH    +  LGF  D+ +SN+L+DMYAK G M  AE++FS +  + +
Sbjct: 410 ----YRLLDEGKRVHEWIKENDLGF--DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQ-RMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--- 359
           +SWN +I GY +   + +A+ L    ++   F PDE T   +L AC        GRE   
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523

Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                           +FD + S  + SW  M++ Y      KE
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           AI LF +M+  G++ D  +   +L +C+  G+++ G
Sbjct: 584 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 239/505 (47%), Gaps = 71/505 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+  ++     +   CN L+++YSKC +  SA+ +F +M  + + S+ ++++   +
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A KLF+EM E                               EG  P   T+ +V
Sbjct: 375 EGLAGEAVKLFEEMEE-------------------------------EGISPDVYTVTAV 403

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                    ++ G+R H  + +  L  +I+V+NAL+ +YAKCG  + A  VF EM   + 
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +++  ++ G +K     EAL +F L++  K  S D  +++ VL  CA             
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA------------- 510

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S + F +   G+++H   ++ G+ +D H++NSL+DMYAK G +  A ++F ++  + +VS
Sbjct: 511 SLSAFDK---GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W VMIAGYG      +AI L  +M+  G E DE++ +++L AC  SG +  G   F+ M 
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P+V  +  ++   +++    + IK +R ++   + PD T    +L  C     +
Sbjct: 628 HECKIEPTVEHYACIVDMLART---GDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI-----VCW-- 473
           +  ++V     +       Y    +  IY++ ++ E  +R+  RI +  +       W  
Sbjct: 685 KLAEKVAEKVFELEPENTGYYVL-MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743

Query: 474 -----NSMIAGLSLN--SLDIEAFM 491
                N  +AG S N  + +IEAF+
Sbjct: 744 IKGRVNIFVAGDSSNPETENIEAFL 768


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/717 (31%), Positives = 366/717 (51%), Gaps = 57/717 (7%)

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S  L  A+ LFD+ P R+  S+ +L+    R+G  ++A  ++  +   G        +SV
Sbjct: 40  SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSV 99

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K S  L D   GR+ H   IK G   ++ V  +L+  Y K    K    VF+EM E N 
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+T ++SG A+     E L +F  M  +    +S + ++ LGV A EG G         
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG-------- 211

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G QVH + +K G +  + +SNSL+++Y K G++  A ++F     +SVV+W
Sbjct: 212 --------RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTW 263

Query: 307 NVMIAGYGQKYQSTKAIELLQRM----------------KSC------------------ 332
           N MI+GY       +A+ +   M                K C                  
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323

Query: 333 -GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-PSVSSWNAMLSSYSQSENHKEAIK 390
            GF  D+     ++VA  +   +     +F  +    +V SW AM+S + Q++  +EA+ 
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF EM+ +GV+P+  T ++IL++   +    S  +VHA  +KT     + V + L+  Y 
Sbjct: 384 LFSEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAYV 439

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           K  + E A +VF  I + DIV W++M+AG +       A   F ++ +  + P +F+F++
Sbjct: 440 KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSS 499

Query: 511 VLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           +L+ CA  ++S  QG+Q H    K    + + V SAL+ MY K G+I  A + F     K
Sbjct: 500 ILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK 559

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + V+WN MI GYAQ+G   +A+ ++K+M    VK D +TF+ +  AC+H+GLV+ G + F
Sbjct: 560 DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYF 619

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           + M  D  + P  +H +CM+D   RAG   +A  +I+ MP      IW  +L++CR+H  
Sbjct: 620 DIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKK 679

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             L + AAE++  + P++SA Y LL+N+Y+  G W +   VR+LM+E  + K+P YS
Sbjct: 680 TELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 736



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 178/646 (27%), Positives = 299/646 (46%), Gaps = 90/646 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH   ++ G  DD  +   L++ Y K +N    +                       
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGR----------------------- 148

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+FDEM ERNVV+W  LIS   RN + ++ L+++ +M NEG  P   T    
Sbjct: 149 --------KVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFT---- 196

Query: 127 FKASTALLDVE----HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           F A+  +L  E     G + H +V+K GLDK I V+N+L++LY KCG  + A  +F++  
Sbjct: 197 FAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 256

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + VT+ +M+SG A     +EAL MF  M    V +   S +SV+ +CA          
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN--------- 307

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
               + +F+     +Q+HC  +K GF  D ++  +L+  Y+K   M  A  +F  +    
Sbjct: 308 --LKELRFT-----EQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT--------------------- 340
           +VVSW  MI+G+ Q     +A++L   MK  G  P+E T                     
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVV 420

Query: 341 ----------SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                        +L A V+ G ++   ++F  +    + +W+AML+ Y+Q+   + AIK
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGI-LESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +F E+   G+KP+  T + IL+ CAA    +  GKQ H  ++K+       V+S L+ +Y
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +K    E AE VF R  E D+V WNSMI+G + +   ++A   FK+M++ ++     +F 
Sbjct: 541 AKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFI 600

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV-GSALIEMYCKCGDIYGARQFFDMMHG 568
            V ++C       +G +    + +D  +       S ++++Y + G +  A +  + M  
Sbjct: 601 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN 660

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
               T    I    +     E  RL  + I + +KP+D     +L+
Sbjct: 661 PAGSTIWRTILAACRVHKKTELGRLAAEKIIA-MKPEDSAAYVLLS 705



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 161/334 (48%), Gaps = 1/334 (0%)

Query: 349 VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
           V S  +     +FD  P     S+ ++L  +S+    +EA +LF  +   G++ D +  +
Sbjct: 38  VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
            +L   A +     G+Q+H   +K     D  V + L+  Y K    +   +VF  + E 
Sbjct: 98  SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           ++V W ++I+G + NS++ E    F +M+     P  F+FA  L   A+     +G QVH
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
             + K+G    I V ++LI +Y KCG++  AR  FD    K+ VTWN MI GYA NG   
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
           EA+ ++  M  + V+  + +F +++  C++   +    ++  S+ + +G     +  T +
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV-VKYGFLFDQNIRTAL 336

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           +    +     +A  L  E+ C  + V W  ++S
Sbjct: 337 MVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/647 (31%), Positives = 336/647 (51%), Gaps = 51/647 (7%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D+  G++ H  +++ G+  N+Y+ N LL LY  CG    A  +F++ S  + V++  M+S
Sbjct: 59  DLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMIS 118

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G A      EA  +F LM ++ +  D  +  S+L  C+               +  + N 
Sbjct: 119 GYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACS---------------SPAALN- 162

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G++VH   ++ G   +  + N+L+ MYAK G +  A  +F  +  R  VSW  +   Y 
Sbjct: 163 WGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYA 222

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------------------- 348
           +   + ++++    M   G  P  +T +N+L AC                          
Sbjct: 223 ESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVR 282

Query: 349 ---------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                    ++ G +K  RE+F+ +P+  V +WN M+     S   +EA  +F  M    
Sbjct: 283 VSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKEC 342

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V PDR T   ILS+CA  G L  GK++HA ++K     D    + LI +YSK    + A 
Sbjct: 343 VAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDAR 402

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           +VF R+P+ D+V W +++ G +     +E+F  FK+M Q  +   + ++  VL +C+   
Sbjct: 403 QVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPV 462

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +   G+++HA++ K G   D+ V +AL+ MY KCG +  A +  + M  ++ VTWN +I 
Sbjct: 463 ALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIG 522

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G AQNG G EA++ ++ M +  ++P+  TFV +++AC    LV+ G   F SM+ D+G+ 
Sbjct: 523 GLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIV 582

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P   HY CM+D L RAGH  EAE +I  MP K    +W  LL++CR H NV + ++AAE+
Sbjct: 583 PTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQ 642

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             +L+P+N+  Y  L+ IY++ G W D+  +R+LM E  + K+P  S
Sbjct: 643 CLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRS 689



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 179/655 (27%), Positives = 292/655 (44%), Gaps = 117/655 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H HILR G+  + ++ N L++LY  C + + A+                       
Sbjct: 63  GKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEAR----------------------- 99

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   +LFD+   ++VVSWN +IS     GL ++A +++  M  EG  P   T  S+
Sbjct: 100 --------RLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSI 151

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++   +  GR  H  V++ GL  N  V NAL+S+YAKCG  + A  VF+ M+  +E
Sbjct: 152 LSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDE 211

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T +    A++    E+L+ +  M+++ V    ++  +VL  C               
Sbjct: 212 VSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACG-------------- 257

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+Q+H   ++    +D+ +S +L  MY K G +  A  +F  LP R V++W
Sbjct: 258 --SLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAW 315

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR---------------- 350
           N MI G     Q  +A  +  RM      PD VT + +L AC R                
Sbjct: 316 NTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVK 375

Query: 351 -------------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                              +G +K  R++FD MP   V SW A++  Y+      E+   
Sbjct: 376 DGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFST 435

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F++M  +GV+ ++ T   +L +C+    L+ GK++HA  +K     D  VA+ L+ +Y K
Sbjct: 436 FKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFK 495

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E A RV   +   D+V WN++I GL+ N   +EA   F+ M+  EM P   +F  V
Sbjct: 496 CGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNV 555

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           +S+C   +   +GR+  A + KD        G    E +  C                  
Sbjct: 556 MSACRVRNLVEEGRRQFASMRKD-------YGIVPTEKHYAC------------------ 590

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIAS-GVKPDDITFVAILTACSHSGLVDVG 625
                M+   A+ G+  EA    +D+I +   KP    + A+L AC   G V++G
Sbjct: 591 -----MVDILARAGHLGEA----EDVILTMPFKPSAAMWGALLAACRAHGNVEIG 636



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 192/387 (49%), Gaps = 24/387 (6%)

Query: 51  HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
           H D+    A+     K   ++ A ++F+ +P R+V++WN +I  LV +G  E+A  ++++
Sbjct: 278 HSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHR 337

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M  E   P  +T  ++  A      +  G+  H   +K GL  ++   NAL+++Y+K G 
Sbjct: 338 MLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGS 397

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            K A  VF+ M + + V++TA++ G A   +VVE+   F+ M+++ V  + ++   VL  
Sbjct: 398 MKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKA 457

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           C+               N  +    G+++H   +K G  ADL ++N+L+ MY K G ++ 
Sbjct: 458 CS---------------NPVALK-WGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVED 501

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A  +   +  R VV+WN +I G  Q  +  +A++  + MKS    P+  T +N++ AC  
Sbjct: 502 AIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRV 561

Query: 351 SGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
              ++ GR  F SM       P+   +  M+   +++ +  EA  +   M F   KP   
Sbjct: 562 RNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPF---KPSAA 618

Query: 406 TLAIILSSCAAMGILESGKQVHAASLK 432
               +L++C A G +E G+Q     LK
Sbjct: 619 MWGALLAACRAHGNVEIGEQAAEQCLK 645



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 177/380 (46%), Gaps = 40/380 (10%)

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
           +G + D      +L SC     L  GKQVH   L+     + Y+ + L+ +Y  C     
Sbjct: 38  KGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNE 97

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A R+F +     +V WN MI+G +   L  EAF  F  M+Q  + P +F+F ++LS+C+ 
Sbjct: 98  ARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSS 157

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
            ++   GR+VH ++ + G  N+  VG+ALI MY KCG +  AR+ FD M  ++ V+W  +
Sbjct: 158 PAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTL 217

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI--------- 628
              YA++GY  E+++ Y  M+  GV+P  IT++ +L+AC     ++ G +I         
Sbjct: 218 TGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEH 277

Query: 629 ---------FNSMQLDHG-VEPILDHYTC-----------MIDCLGRAGHFHEAEMLIDE 667
                       M +  G V+   + + C           MI  L  +G   EA  +   
Sbjct: 278 HSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHR 337

Query: 668 M--PC-KDDPVIWEVLLSSCRLHANVRLAK----RAAEELFRLDPKNSAPYSLLANIYSS 720
           M   C   D V +  +LS+C     +   K    RA ++    D +     + L N+YS 
Sbjct: 338 MLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFG---NALINMYSK 394

Query: 721 LGRWDDLRAVRELMSENCIV 740
            G   D R V + M +  +V
Sbjct: 395 AGSMKDARQVFDRMPKRDVV 414


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/685 (30%), Positives = 369/685 (53%), Gaps = 58/685 (8%)

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           A S  + M+ +   P   T + + K+     + + G+  H  +++ GL+ +  V N L+S
Sbjct: 10  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69

Query: 164 LYAKCGWTKHAVPVFEEMSEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
           LY+KCG T+ A  +FE M    + V+++AM+S  A      +A+  F  M+      +  
Sbjct: 70  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 129

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDM 281
             ++V+  C+          +A           G+ ++   +K G+ EAD+ +   L+DM
Sbjct: 130 CFAAVIRACSNAN-------YAWV---------GEIIYGFVVKTGYLEADVCVGCELIDM 173

Query: 282 YAK-NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           + K +GD+ SA  +F  +PER++V+W +MI  + Q   +  AI+L   M+  G+ PD  T
Sbjct: 174 FVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFT 233

Query: 341 S--------------------------------------INMLVACVRSGDIKTGREMFD 362
                                                  ++M   C   G +   R++F+
Sbjct: 234 YSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 293

Query: 363 SMPSPSVSSWNAMLSSYSQS-ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
            MP  +V SW A++++Y QS E  KEAI+LF +M    ++P+  + + +L +C  +    
Sbjct: 294 QMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 353

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           +G+QV++ ++K      N V + LI +Y++  R E A + F  + E ++V +N+++ G +
Sbjct: 354 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 413

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N    EAF+ F ++    +  + F+FA++LS  A + +  +G Q+H ++ K GY ++  
Sbjct: 414 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 473

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           + +ALI MY +CG+I  A Q F+ M  +N ++W  MI G+A++G+   A+ ++  M+ +G
Sbjct: 474 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 533

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
            KP++IT+VA+L+ACSH G++  G + FNSM  +HG+ P ++HY CM+D LGR+G   EA
Sbjct: 534 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 593

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
              I+ MP   D ++W  LL +CR+H N  L + AAE +   +P + A Y LL+N+++S 
Sbjct: 594 MEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASA 653

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           G+W D+  +R+ M E  ++K+   S
Sbjct: 654 GQWKDVVKIRKSMKERNLIKEAGCS 678



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 168/643 (26%), Positives = 299/643 (46%), Gaps = 91/643 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKL+H  ++++GL  D+ + N LI LYSKC +T +A+ +F+ M +K              
Sbjct: 45  GKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNK-------------- 90

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                           R++VSW+ ++S    N +E +A+  +  M   GF P     A+V
Sbjct: 91  ----------------RDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAV 134

Query: 127 FKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAK-CGWTKHAVPVFEEMSEP 184
            +A +       G   +G V+K G L+ ++ V   L+ ++ K  G    A  VF++M E 
Sbjct: 135 IRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPER 194

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N VT+T M++  A+     +A+++F  M       D  + SSVL  C   G      + A
Sbjct: 195 NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG------LLA 248

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIFSNLPER 301
                      G+Q+H   I+LG   D+ +  SL+DMYAK   +G +D +  +F  +PE 
Sbjct: 249 L----------GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 298

Query: 302 SVVSWNVMIAGYGQKYQSTK-AIELLQRMKSCGFEPDEVTSINMLVAC------------ 348
           +V+SW  +I  Y Q  +  K AIEL  +M S    P+  +  ++L AC            
Sbjct: 299 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 358

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   RSG ++  R+ FD +   ++ S+NA++  Y+++   
Sbjct: 359 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 418

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +EA  LF E+   G+     T A +LS  A++G +  G+Q+H   LK     +  + + L
Sbjct: 419 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 478

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YS+C   E A +VF+ + + +++ W SMI G + +     A   F +M +    P +
Sbjct: 479 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 538

Query: 506 FSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            ++  VLS+C+ +    +G +  ++  ++ G V  +   + ++++  + G +  A +F +
Sbjct: 539 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 598

Query: 565 MMH-GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
            M    + + W  ++     +G   E  R   +MI    +PDD
Sbjct: 599 SMPLMADALVWRTLLGACRVHG-NTELGRHAAEMILEQ-EPDD 639


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/685 (30%), Positives = 369/685 (53%), Gaps = 58/685 (8%)

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           A S  + M+ +   P   T + + K+     + + G+  H  +++ GL+ +  V N L+S
Sbjct: 28  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87

Query: 164 LYAKCGWTKHAVPVFEEMSEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
           LY+KCG T+ A  +FE M    + V+++AM+S  A      +A+  F  M+      +  
Sbjct: 88  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 147

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDM 281
             ++V+  C+          +A           G+ ++   +K G+ EAD+ +   L+DM
Sbjct: 148 CFAAVIRACSNAN-------YAWV---------GEIIYGFVVKTGYLEADVCVGCELIDM 191

Query: 282 YAK-NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           + K +GD+ SA  +F  +PER++V+W +MI  + Q   +  AI+L   M+  G+ PD  T
Sbjct: 192 FVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFT 251

Query: 341 S--------------------------------------INMLVACVRSGDIKTGREMFD 362
                                                  ++M   C   G +   R++F+
Sbjct: 252 YSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 311

Query: 363 SMPSPSVSSWNAMLSSYSQS-ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
            MP  +V SW A++++Y QS E  KEAI+LF +M    ++P+  + + +L +C  +    
Sbjct: 312 QMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 371

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           +G+QV++ ++K      N V + LI +Y++  R E A + F  + E ++V +N+++ G +
Sbjct: 372 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 431

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N    EAF+ F ++    +  + F+FA++LS  A + +  +G Q+H ++ K GY ++  
Sbjct: 432 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 491

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           + +ALI MY +CG+I  A Q F+ M  +N ++W  MI G+A++G+   A+ ++  M+ +G
Sbjct: 492 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 551

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
            KP++IT+VA+L+ACSH G++  G + FNSM  +HG+ P ++HY CM+D LGR+G   EA
Sbjct: 552 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 611

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
              I+ MP   D ++W  LL +CR+H N  L + AAE +   +P + A Y LL+N+++S 
Sbjct: 612 MEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASA 671

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           G+W D+  +R+ M E  ++K+   S
Sbjct: 672 GQWKDVVKIRKSMKERNLIKEAGCS 696



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 168/643 (26%), Positives = 299/643 (46%), Gaps = 91/643 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKL+H  ++++GL  D+ + N LI LYSKC +T +A+ +F+ M +K              
Sbjct: 63  GKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNK-------------- 108

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                           R++VSW+ ++S    N +E +A+  +  M   GF P     A+V
Sbjct: 109 ----------------RDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAV 152

Query: 127 FKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAK-CGWTKHAVPVFEEMSEP 184
            +A +       G   +G V+K G L+ ++ V   L+ ++ K  G    A  VF++M E 
Sbjct: 153 IRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPER 212

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N VT+T M++  A+     +A+++F  M       D  + SSVL  C   G      + A
Sbjct: 213 NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG------LLA 266

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIFSNLPER 301
                      G+Q+H   I+LG   D+ +  SL+DMYAK   +G +D +  +F  +PE 
Sbjct: 267 L----------GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 316

Query: 302 SVVSWNVMIAGYGQKYQSTK-AIELLQRMKSCGFEPDEVTSINMLVAC------------ 348
           +V+SW  +I  Y Q  +  K AIEL  +M S    P+  +  ++L AC            
Sbjct: 317 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 376

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   RSG ++  R+ FD +   ++ S+NA++  Y+++   
Sbjct: 377 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 436

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +EA  LF E+   G+     T A +LS  A++G +  G+Q+H   LK     +  + + L
Sbjct: 437 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 496

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YS+C   E A +VF+ + + +++ W SMI G + +     A   F +M +    P +
Sbjct: 497 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 556

Query: 506 FSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            ++  VLS+C+ +    +G +  ++  ++ G V  +   + ++++  + G +  A +F +
Sbjct: 557 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 616

Query: 565 MMH-GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
            M    + + W  ++     +G   E  R   +MI    +PDD
Sbjct: 617 SMPLMADALVWRTLLGACRVHG-NTELGRHAAEMILEQ-EPDD 657


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 227/776 (29%), Positives = 388/776 (50%), Gaps = 86/776 (11%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + +HA ++  GL    F   +LI+ YS      S+  +F ++                  
Sbjct: 24  RRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVS----------------- 66

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                        P +NV  WN++I A  +NG   KAL  Y K+      P   T  SV 
Sbjct: 67  -------------PAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVI 113

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA   L D E G   +  ++++G + ++YV NAL+ +Y++ G    A  VF+EM   + V
Sbjct: 114 KACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLV 173

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++ +++SG +      EALE++  +    +  DS ++SSVL   A         V  Q  
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFA------NLLVVKQ-- 225

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   GQ +H  T+K G  +   ++N LL MY K      A  +F  +  R  V++N
Sbjct: 226 --------GQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYN 277

Query: 308 VMIAGYGQKYQSTKAIEL-LQRMKSCGFEPDEVTSINMLVAC------------------ 348
            MI GY +     +++++ L+ +    F+PD +T  ++L AC                  
Sbjct: 278 TMICGYLKLEMVEESVKMFLENLDQ--FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLR 335

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + GD+ T R++F+SM      SWN+++S Y QS +  EA+KL
Sbjct: 336 AGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKL 395

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+ M     + D  T  +++S    +  L+ GK +H+  +K+  +ID  V++ LI +Y+K
Sbjct: 396 FKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAK 455

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     + ++F+ +  LD V WN++I+                QMR+N++ P   +F   
Sbjct: 456 CGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVT 515

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L  CA L++   G+++H  + + GY +++ +G+ALIEMY KCG +  + + F+ M  ++ 
Sbjct: 516 LPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDV 575

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           VTW  MI+ Y   G G++A+  + DM  SG+ PD + F+A++ ACSHSGLV+ G+  F  
Sbjct: 576 VTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEK 635

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M+  + ++P+++HY C++D L R+    +AE  I  MP + D  IW  +L +CR   ++ 
Sbjct: 636 MKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDME 695

Query: 692 LAKRAAEELFRLDPKNSAPYSLLA-NIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            A+R +  +  L+P +   YS+LA N Y++L +WD +  +R+ + +  I K+P YS
Sbjct: 696 TAERVSRRIIELNPDDPG-YSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYS 750



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/659 (24%), Positives = 297/659 (45%), Gaps = 102/659 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G L++  IL  G   D ++ N L+++YS+      A+ +FD+MP +D+ SWN+       
Sbjct: 125 GDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNS------- 177

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LIS    +G  E+AL +Y+++ N   VP   T++SV
Sbjct: 178 ------------------------LISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSV 213

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   LL V+ G+  HG  +K G++    V N LL++Y K      A  VF+EM   + 
Sbjct: 214 LPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDS 273

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+  M+ G  K + V E+++MF L        D ++++SVL  CA   CG   D+    
Sbjct: 274 VTYNTMICGYLKLEMVEESVKMF-LENLDQFKPDILTVTSVL--CA---CGHLRDLSL-- 325

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                     + ++   ++ GF  +  + N L+D+YAK GDM +A  +F+++  +  VSW
Sbjct: 326 ---------AKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSW 376

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
           N +I+GY Q     +A++L + M     + D +T + ++    R  D+K G+        
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIK 436

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                      ++F+SM +    +WN ++S+  +  +    +++
Sbjct: 437 SGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQV 496

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
             +M+   V PD  T  + L  CA++     GK++H   L+     +  + + LI +YSK
Sbjct: 497 TTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSK 556

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E + RVF R+   D+V W  MI    +     +A   F  M ++ + P    F  +
Sbjct: 557 CGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIAL 616

Query: 512 LSSCA------KLSSSFQGRQVHAQIEK--DGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
           + +C+      K  + F+  + H +I+   + Y       + ++++  +   I  A +F 
Sbjct: 617 IYACSHSGLVEKGLACFEKMKTHYKIDPMIEHY-------ACVVDLLSRSQKISKAEEFI 669

Query: 564 DMMH-GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
             M    +   W  ++     +G  + A R+ + +I   + PDD  + +IL + +++ L
Sbjct: 670 QAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIE--LNPDDPGY-SILASNAYAAL 725



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 161/639 (25%), Positives = 292/639 (45%), Gaps = 60/639 (9%)

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
           T ++ A + +A ++  ++   RR H LVI +GLD + + +  L+  Y+       ++ VF
Sbjct: 3   TRVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVF 62

Query: 179 EEMSEPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
             +S    V  + +++   +K     +ALE +  +    VS D  +  SV+  CA     
Sbjct: 63  RRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACA----- 117

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                       F   + G  V+   +++GFE+DL++ N+L+DMY++ G +  A  +F  
Sbjct: 118 ----------GLFDAEM-GDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDE 166

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-----CVRSG 352
           +P R +VSWN +I+GY       +A+E+   +++    PD  T  ++L A      V+ G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQG 226

Query: 353 D------IKTG------------------------REMFDSMPSPSVSSWNAMLSSYSQS 382
                  +K+G                        R +FD M      ++N M+  Y + 
Sbjct: 227 QGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKL 286

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
           E  +E++K+F E      KPD  T+  +L +C  +  L   K ++   L+    +++ V 
Sbjct: 287 EMVEESVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVK 345

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + LI +Y+KC     A  VF+ +   D V WNS+I+G   +   +EA   FK M   E  
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
               ++  ++S   +L+    G+ +H+   K G   D+ V +ALI+MY KCG++  + + 
Sbjct: 406 ADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKI 465

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F+ M   +TVTWN +I    + G     +++   M  + V PD  TF+  L  C+     
Sbjct: 466 FNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAK 525

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            +G EI   + L  G E  L     +I+   + G    +  + + M  + D V W  ++ 
Sbjct: 526 RLGKEIHCCL-LRFGYESELQIGNALIEMYSKCGCLESSFRVFERMS-RRDVVTWTGMIY 583

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSL--LANIYS 719
           +  ++      ++A E    ++     P S+  +A IY+
Sbjct: 584 AYGMYGE---GEKALESFVDMEKSGIVPDSVVFIALIYA 619


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 230/746 (30%), Positives = 367/746 (49%), Gaps = 61/746 (8%)

Query: 40  HSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPER---NVVSWNNLISALV 96
           H A   FD +        NA+++   K  D E AY +F  M  R   ++VSWN +ISA V
Sbjct: 257 HEASLGFDPLAS------NALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASV 310

Query: 97  RNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL-LDVEHGRRCHGLVIKIGLDKNI 155
             G    A++++ ++  EG  P  +TL ++  A  A  +D    R  HG + + G  +++
Sbjct: 311 EAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDV 370

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR--VVEALEMFRLMI 213
            + NA++S+YAKCG+   A  VF  +    +V     M G A  DR    + +  F  M+
Sbjct: 371 VIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLG-ASEDRKSFGKVVNTFHHML 429

Query: 214 RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
              +  + VS  ++L  C+       S+        F R +H      LT +  +  +  
Sbjct: 430 LAGIDPNKVSFIAILNACS------NSEAL-----DFGRKIHSL---ILTRRRDY-VESS 474

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSN--LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           ++  L+ MY K G +  AE++F    LP RS+V+WNVM+  Y Q  +S +A   L  M  
Sbjct: 475 VATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQ 534

Query: 332 CGFEPDEVTSINMLVACV-------------------------------RSGDIKTGREM 360
            G  PD ++  ++L +C                                R  +++  R +
Sbjct: 535 GGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSV 594

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F+ M    V SW AM+S+ +++ + KE   LFR MQ  GV PD+ TLA  L +C A   L
Sbjct: 595 FNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTL 654

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
             GK +HA   +     D  V + L+ +YS C     A   F  +   D+V WN M A  
Sbjct: 655 GLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAY 714

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           +   L  EA + F+QM+   + P + +F+T L+     +    G+  HA   + G  +D+
Sbjct: 715 AQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDV 774

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            V + L+++Y KCG +  A   F        V  N +I   AQ+G+ +EAV+++  M   
Sbjct: 775 SVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQE 834

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           GV+PD  T V+I++AC H+G+V+ G   F +M+   G+ P L+HY C +D LGRAG    
Sbjct: 835 GVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEH 894

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           AE +I +MP +D+ ++W  LL +C+L  +  L +R A+ +  LDP NSA + +L+NIY +
Sbjct: 895 AEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCA 954

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
            G+W D    R+ M +  +   P  S
Sbjct: 955 TGKWKDADVDRKKMLDENVKNAPGMS 980



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 202/748 (27%), Positives = 335/748 (44%), Gaps = 115/748 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  H  I   GL    FL N LI +Y +C +                            
Sbjct: 44  GKHAHELIANAGLEQHLFLGNCLINMYVRCGS---------------------------- 75

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLAS 125
              LE A+ +F +M ERNVVSW  LISA  + G   +A +++  M  E    P   TL +
Sbjct: 76  ---LEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVA 132

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDK----NIYVANALLSLYAKCGWTKHAVPVFEEM 181
           +  A     D+  GR  H ++ ++GL++       V NA++++YAKCG  + A+ VF  +
Sbjct: 133 MLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAI 192

Query: 182 SEPNEVTFTAMMSGLAKTDRVV-EALEMFRLMIRKAVSIDSVSLSSVLGVCA--REGCGV 238
            E + V++TAM    A+  R   +AL +FR M+ + ++ + ++  + LG C   R+G  +
Sbjct: 193 PEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWL 252

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
            S +   S                   LGF  D   SN+L++MY K GD + A  +F  +
Sbjct: 253 HSLLHEAS-------------------LGF--DPLASNALINMYGKCGDWEGAYSVFKAM 291

Query: 299 PERS---VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG--- 352
             R    +VSWN MI+   +  +   A+ + +R++  G  P+ VT I +L A   SG   
Sbjct: 292 ASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDF 351

Query: 353 -----------------DIKTGREMFDSMPSP------------------SVSSWNAMLS 377
                            D+  G  +  SM +                    V SWN ML 
Sbjct: 352 GAARGFHGRIWESGYLRDVVIGNAII-SMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLG 410

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL-KTASH 436
           +    ++  + +  F  M   G+ P++ +   IL++C+    L+ G+++H+  L +   +
Sbjct: 411 ASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY 470

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHR--IPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
           +++ VA+ L+ +Y KC     AE VF    +P   +V WN M+   + N    EAF    
Sbjct: 471 VESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALM 530

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           +M Q  + P   SF +VLSSC     S + + +   I + GY     + +ALI M+ +C 
Sbjct: 531 EMLQGGVLPDALSFTSVLSSC---YCSQEAQVLRMCILESGY-RSACLETALISMHGRCR 586

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
           ++  AR  F+ M   + V+W  M+   A+N    E   L++ M   GV PD  T    L 
Sbjct: 587 ELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLD 646

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
            C  S  + +G ++ ++   + G+E  +     +++     G + EA    + M  + D 
Sbjct: 647 TCLASTTLGLG-KVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR-DL 704

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFR 702
           V W ++ ++   +A   LAK A   LFR
Sbjct: 705 VSWNIMSAA---YAQAGLAKEAV-LLFR 728



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 163/602 (27%), Positives = 285/602 (47%), Gaps = 82/602 (13%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D+  G+  H L+   GL++++++ N L+++Y +CG  + A  +F +M E N V++TA++S
Sbjct: 40  DLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALIS 99

Query: 195 GLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
             A+      A  +FR M +  + + +S +L ++L  CA                  SR+
Sbjct: 100 ANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACAN-----------------SRD 142

Query: 254 VH-GQQVHCLTIKLGFE-----ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
           +  G+ +H +  +LG E     A L + N++++MYAK G ++ A  +F  +PE+ VVSW 
Sbjct: 143 LAIGRSIHAMIWELGLERASTTATL-VGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWT 201

Query: 308 VMIAGYGQKYQ-STKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
            M   Y Q+ +    A+ + + M      P+ +T I  L AC                  
Sbjct: 202 AMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASL 261

Query: 350 ---------------RSGDIKTGREMFDSMPSPS---VSSWNAMLSSYSQSENHKEAIKL 391
                          + GD +    +F +M S     + SWNAM+S+  ++  H +A+ +
Sbjct: 262 GFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAI 321

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGI-LESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           FR ++  G++P+  TL  IL++ AA G+   + +  H    ++    D  + + +I +Y+
Sbjct: 322 FRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYA 381

Query: 451 KCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFM----FFKQMRQNEMYPTQ 505
           KC     A  VF RI  + D++ WN+M+      S D ++F      F  M    + P +
Sbjct: 382 KCGFFSAAWAVFRRIRWKCDVISWNTMLGA----SEDRKSFGKVVNTFHHMLLAGIDPNK 437

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQI--EKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            SF  +L++C+   +   GR++H+ I   +  YV    V + L+ MY KCG I  A   F
Sbjct: 438 VSFIAILNACSNSEALDFGRKIHSLILTRRRDYVES-SVATMLVSMYGKCGSISEAELVF 496

Query: 564 DMM--HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
             M    ++ VTWN M+  YAQN    EA     +M+  GV PD ++F ++L++C  S  
Sbjct: 497 KEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ- 555

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
                ++     L+ G        T +I   GR     +A  + +EM    D V W  ++
Sbjct: 556 ---EAQVLRMCILESGYRSACLE-TALISMHGRCRELEQARSVFNEMD-HGDVVSWTAMV 610

Query: 682 SS 683
           S+
Sbjct: 611 SA 612



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 132/308 (42%), Gaps = 51/308 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++HA +   GL  D  + N L+ +YS C +   A   F+ M  +D+ SWN I+SA   
Sbjct: 657 GKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWN-IMSA--- 712

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                      A  + GL ++A+ ++ +M  EG  P  +T ++ 
Sbjct: 713 ---------------------------AYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTT 745

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              S     V  G+  H L  + GLD ++ VA  L+ LYAKCG    A+ +F    +   
Sbjct: 746 LNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTV 805

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V   A++  LA+     EA++MF  M ++ V  D  +L S++  C   G      +  + 
Sbjct: 806 VLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAG------MVEEG 859

Query: 247 DNKFSRNVHGQQVHCLTIK--LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSV 303
            + F           LT+K   G    L      +D+  + G ++ AE I   +P E + 
Sbjct: 860 CSSF-----------LTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNT 908

Query: 304 VSWNVMIA 311
           + W  ++ 
Sbjct: 909 LVWTSLLG 916



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 6/170 (3%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +  +L SC   +   +G+  H  I   G    +F+G+ LI MY +CG +  A   F  M 
Sbjct: 28  YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVDVGV 626
            +N V+W  +I   AQ G    A  L++ M + S   P+  T VA+L AC++S  + +G 
Sbjct: 88  ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 627 EIFNSMQLDHGVEPILDHYT----CMIDCLGRAGHFHEAEMLIDEMPCKD 672
            I ++M  + G+E      T     MI+   + G   +A  +   +P KD
Sbjct: 148 SI-HAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKD 196


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/656 (32%), Positives = 358/656 (54%), Gaps = 64/656 (9%)

Query: 135 DVEHGRRCHGLVIKIG--LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP--NEVTFT 190
           D+  GR   G +++ G  L+ +  VAN+LL+LY+KC     A  VF+ M     + V++T
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           AM S L++     EAL +F   + + +      L +   +CA       S++F       
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGL------LPNAFTLCAATQACFASELF------- 168

Query: 251 SRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
             ++ G  V  L  KLGF   D+ +  +L+DM+AKNGD+ +   +F  L ER+VV W ++
Sbjct: 169 --HLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLL 226

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------ 357
           I  Y Q   S +A+EL   M   GF+PD+ T  +ML AC   G  + G            
Sbjct: 227 ITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGL 286

Query: 358 --------------------------REMFDSMPSPSVSSWNAMLSSYSQ-SENHKEAIK 390
                                     RE+F+ MP  +V +W A+LS Y Q      + + 
Sbjct: 287 ESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMI 346

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF +M   G++P+  T + +L +CA +G  +SG+Q+H   +K+     N V + L+ +Y+
Sbjct: 347 LFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYA 406

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           +    E A   F ++ E ++V ++  + G   ++   +      Q+ + E+  + F+F +
Sbjct: 407 ESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD-----YQIERMELGISTFTFGS 461

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           ++S+ A +    +G+++HA   K G+ +D  +G++L+ MY +CG +  A Q FD M+  N
Sbjct: 462 LISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHN 521

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            ++W  MI G A++GY   A+ L+ DMIA+GVKP+D+T++A+L+ACSH+GLV  G E F 
Sbjct: 522 VISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFR 581

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
            MQ  HG+ P ++HY CM+D LGR+G   +A   I+EMPC+ D ++W+ LL +C+ H N+
Sbjct: 582 MMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNM 641

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + + AA  + +L+P++ APY LL+N+Y+  G WD +  +R LM +  ++K+   S
Sbjct: 642 DIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLS 697



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 292/615 (47%), Gaps = 91/615 (14%)

Query: 7   GKLLHAHILRNG--LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           G+ L  H+LR G  L  D  + N L+ LYSKC+   +A+                     
Sbjct: 66  GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAAR--------------------- 104

Query: 65  CKSDDLEFAYKLFDEMPE--RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                      +FD MP   R++VSW  + S L RNG E +AL ++ +   EG +P   T
Sbjct: 105 ----------SVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFT 154

Query: 123 LASVFKASTALLDVEH--GRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFE 179
           L +  +A  A  ++ H  G    GLV K+G    ++ V  AL+ ++AK G       VF+
Sbjct: 155 LCAATQACFA-SELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFD 213

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            + E   V +T +++  A++    EA+E+F  M+      D  +LSS+L  C   G    
Sbjct: 214 GLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELG---- 269

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK--NGD-MDSAEVIFS 296
                     F     GQQ+H L ++LG E+D  +S  L+DMYAK  NG  + +A  +F+
Sbjct: 270 ---------SFRL---GQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFN 317

Query: 297 NLPERSVVSWNVMIAGYGQK-YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
            +P+ +V++W  +++GY Q+  Q  + + L  +M + G  P+ +T  +ML AC   GD  
Sbjct: 318 RMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQD 377

Query: 356 TGREMFDSMPSPSVSSW----NAMLSSYSQSENHKEAIKLF------------------- 392
           +GR++       +++      NA++S Y++S + +EA   F                   
Sbjct: 378 SGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDG 437

Query: 393 REMQFRGVKPDRTTLAI-------ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           R   ++  + +R  L I       ++S+ A++G+L  G+++HA SLK     D  + + L
Sbjct: 438 RSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSL 497

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +YS+C     A +VF  + + +++ W SMI+GL+ +     A   F  M    + P  
Sbjct: 498 VSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPND 557

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEK-DGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            ++  VLS+C+      +G++    ++K  G +  +   + ++++  + G +  A  F +
Sbjct: 558 VTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFIN 617

Query: 565 MMHGK-NTVTWNEMI 578
            M  + + + W  ++
Sbjct: 618 EMPCQVDALVWKTLL 632



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 36/230 (15%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ +H H +++ L D   + N L+ +Y++  +   A+H FD++  K++ S++  L    
Sbjct: 378 SGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDG 437

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           +S+  +      D   ER                  E  +S +             T  S
Sbjct: 438 RSNTYQ------DYQIER-----------------MELGISTF-------------TFGS 461

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A+ ++  +  G+R H L +K G   +  + N+L+S+Y++CG+   A  VF+EM++ N
Sbjct: 462 LISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHN 521

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            +++T+M+SGLAK      ALE+F  MI   V  + V+  +VL  C+  G
Sbjct: 522 VISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAG 571


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/606 (34%), Positives = 328/606 (54%), Gaps = 56/606 (9%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYA--KCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
           ++ H  +IK GL    +  + L+   A    G   +A+ +FE + +PN+  +  M+ G +
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
            +   V A++ +  M+   V  +S +   +L  CA+ G   E                G+
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQE----------------GK 152

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           Q+H   +KLG E+D  +  SL++MYA+NG++  AE++FS    R  VS+  +I GY    
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGY---- 208

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                      ++ C                     +   R +F+ +P     SWNAM++
Sbjct: 209 ----------TLRGC---------------------LDDARRLFEEIPVRDAVSWNAMIA 237

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y+QS   +EA+  F+EM+   V P+ +T+  +LS+CA  G LE G  V +         
Sbjct: 238 GYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGS 297

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           +  + + LI +YSKC   + A  +F  I E DI+ WN MI G S  +   EA   F++M+
Sbjct: 298 NLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ 357

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD--GYVNDIFVGSALIEMYCKCGD 555
           Q+ + P   +F ++L +CA L +   G+ +HA I+K   G  N   + ++LI+MY KCG+
Sbjct: 358 QSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTN-TSLWTSLIDMYAKCGN 416

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           I  A+Q F  M  K+  +WN MI G A +G+ + A+ L++ M   G +PDDITFV +L+A
Sbjct: 417 IEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSA 476

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           CSH+GLV++G + F+SM  D+ + P L HY CMID LGRAG F EAE L+  M  K D  
Sbjct: 477 CSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGA 536

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMS 735
           IW  LL +CR+H NV L + AA+ LF L+P+N   Y LL+NIY++ GRWDD+  +R  ++
Sbjct: 537 IWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLN 596

Query: 736 ENCIVK 741
           +  + K
Sbjct: 597 DKGMKK 602



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 218/424 (51%), Gaps = 25/424 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H H+L+ GL  D F+   LI +Y++      A+ +F K   +D  S+ A+++    
Sbjct: 151 GKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTL 210

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A +LF+E+P R+ VSWN +I+   ++G  E+AL+ + +M      P   T+ +V
Sbjct: 211 RGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTV 270

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      +E G      +   GL  N+ + NAL+ +Y+KCG    A  +FE + E + 
Sbjct: 271 LSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDI 330

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC-GVESDVFAQ 245
           +++  M+ G +  +   EAL +FR M +  V  + V+  S+L  CA  G   +   + A 
Sbjct: 331 ISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAY 390

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D KF               LG   +  L  SL+DMYAK G++++A+ +F+ +  +S+ S
Sbjct: 391 IDKKF---------------LGL-TNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGS 434

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI+G      +  A+EL ++M+  GFEPD++T + +L AC  +G ++ GR+ F SM 
Sbjct: 435 WNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMV 494

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                SP +  +  M+    ++    EA  L + M+   +KPD      +L +C   G +
Sbjct: 495 EDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNME---MKPDGAIWGSLLGACRVHGNV 551

Query: 421 ESGK 424
           E G+
Sbjct: 552 ELGE 555



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 214/485 (44%), Gaps = 112/485 (23%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H+ I++ GL +  F  ++LIE                               A    
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEF-----------------------------CAISPF 79

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            +L +A  LF+ + + N   WN +I     +     A+  Y +M   G  P   T   + 
Sbjct: 80  GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLL 139

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K+   +   + G++ HG V+K+GL+ + +V  +L+++YA+ G   +A  VF + S  + V
Sbjct: 140 KSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAV 199

Query: 188 TFT-------------------------------AMMSGLAKTDRVVEALEMFRLMIRKA 216
           +FT                               AM++G A++ R  EAL  F+ M R  
Sbjct: 200 SFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN 259

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V+ +  ++ +VL  CA+ G  +E                G  V       G  ++L L N
Sbjct: 260 VAPNESTMVTVLSACAQSGS-LEL---------------GNWVRSWIEDHGLGSNLRLVN 303

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+DMY+K GD+D A  +F  + E+ ++SWNVMI GY       +A+ L ++M+    EP
Sbjct: 304 ALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEP 363

Query: 337 DEVTSINMLVAC------------------------------------VRSGDIKTGREM 360
           ++VT +++L AC                                     + G+I+  +++
Sbjct: 364 NDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQV 423

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F  M   S+ SWNAM+S  +   +   A++LFR+M+  G +PD  T   +LS+C+  G++
Sbjct: 424 FAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLV 483

Query: 421 ESGKQ 425
           E G+Q
Sbjct: 484 ELGRQ 488



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 165/326 (50%), Gaps = 42/326 (12%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL--AERVFHRIPE 467
           +LS+C +    ++ KQ+H+  +KT  H   +  S LI   +      L  A  +F  I +
Sbjct: 38  LLSTCKS---FQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            +   WN+MI G SL+S  + A  F+ +M    + P  ++F  +L SCAK+ ++ +G+Q+
Sbjct: 95  PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGD----------------------IYG------- 558
           H  + K G  +D FV ++LI MY + G+                      I G       
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214

Query: 559 --ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             AR+ F+ +  ++ V+WN MI GYAQ+G  +EA+  +++M  + V P++ T V +L+AC
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           + SG +++G  + + ++ DHG+   L     +ID   + G   +A  L + + C+ D + 
Sbjct: 275 AQSGSLELGNWVRSWIE-DHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGI-CEKDIIS 332

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFR 702
           W V++     H N   + + A  LFR
Sbjct: 333 WNVMIGGYS-HMN---SYKEALALFR 354


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/596 (33%), Positives = 330/596 (55%), Gaps = 54/596 (9%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           +N+Y  N LLS Y+K         VF  M   + V++ +++S  A    ++++++ + LM
Sbjct: 73  RNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLM 132

Query: 213 IRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEA 270
           +     +++ ++LS++L + +++GC                 VH G QVH   +K GF++
Sbjct: 133 LYNGPFNLNRIALSTMLILASKQGC-----------------VHLGLQVHGHVVKFGFQS 175

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
            + + + L+DMY+K G +  A   F  +PE++VV +N +IAG                  
Sbjct: 176 YVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAG------------------ 217

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                         L+ C R   I+  R++F  M      SW AM++ ++Q+   +EAI 
Sbjct: 218 --------------LMRCSR---IEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAID 260

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LFREM+   ++ D+ T   +L++C  +  L+ GKQVHA  ++T    + +V S L+ +Y 
Sbjct: 261 LFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYC 320

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC+  + AE VF ++   ++V W +M+ G   N    EA   F  M+ N + P  F+  +
Sbjct: 321 KCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGS 380

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           V+SSCA L+S  +G Q H +    G ++ I V +AL+ +Y KCG I  + + F  M   +
Sbjct: 381 VISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVD 440

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+W  ++ GYAQ G  +E +RL++ M+A G KPD +TF+ +L+ACS +GLV  G +IF 
Sbjct: 441 EVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFE 500

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM  +H + PI DHYTCMID   RAG   EA   I++MP   D + W  LLSSCR H N+
Sbjct: 501 SMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNM 560

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + K AAE L +L+P N+A Y LL++IY++ G+W+++  +R+ M +  + K+P  S
Sbjct: 561 EIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCS 616



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 262/530 (49%), Gaps = 65/530 (12%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H HI++     + FL N L+  Y+K +    A+ +FD+MP +++YSWN +LS+  K 
Sbjct: 29  KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKL 88

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG-FVPTHITLASV 126
             L    ++F  MP R++VSWN+LISA    G   +++  YN M   G F    I L+++
Sbjct: 89  ACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTM 148

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              ++    V  G + HG V+K G    ++V + L+ +Y+K G    A   F+EM E N 
Sbjct: 149 LILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNV 208

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFA- 244
           V +  +++GL +  R+ ++ ++F  M  K    DS+S ++++    + G   E+ D+F  
Sbjct: 209 VMYNTLIAGLMRCSRIEDSRQLFYDMQEK----DSISWTAMIAGFTQNGLDREAIDLFRE 264

Query: 245 ------QSDNKFSRNV-----------HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
                 + D     +V            G+QVH   I+  ++ ++ + ++L+DMY K   
Sbjct: 265 MRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKS 324

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           + SAE +F  +  ++VVSW  M+ GYGQ   S +A+++   M++ G EPD+ T  +++ +
Sbjct: 325 IKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISS 384

Query: 348 CV-----------------------------------RSGDIKTGREMFDSMPSPSVSSW 372
           C                                    + G I+    +F  M      SW
Sbjct: 385 CANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSW 444

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
            A++S Y+Q     E ++LF  M   G KPD+ T   +LS+C+  G+++ G Q+  + +K
Sbjct: 445 TALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIK 504

Query: 433 TASHI---DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
               I   D+Y    +I ++S+  R E A +  +++P   D + W S+++
Sbjct: 505 EHRIIPIEDHYTC--MIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 223/435 (51%), Gaps = 24/435 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H H+++ G     F+ + L+++YSK      A+  FD+MP K++  +N +++   +
Sbjct: 161 GLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMR 220

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E + +LF +M E++ +SW  +I+   +NGL+ +A+ ++ +M  E       T  SV
Sbjct: 221 CSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSV 280

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   ++ ++ G++ H  +I+     NI+V +AL+ +Y KC   K A  VF +M+  N 
Sbjct: 281 LTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNV 340

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM+ G  +     EA+++F  M    +  D  +L SV+  CA      E       
Sbjct: 341 VSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEE------- 393

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q HC  +  G  + + +SN+L+ +Y K G ++ +  +FS +     VSW
Sbjct: 394 ---------GAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSW 444

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             +++GY Q  ++ + + L + M + GF+PD+VT I +L AC R+G ++ G ++F+SM  
Sbjct: 445 TALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIK 504

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  M+  +S++   +EA K   +M F    PD    A +LSSC     +E
Sbjct: 505 EHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPF---SPDAIGWASLLSSCRFHRNME 561

Query: 422 SGKQVHAASLKTASH 436
            GK    + LK   H
Sbjct: 562 IGKWAAESLLKLEPH 576



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 34/200 (17%)

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C  L      +++H  I K     +IF+ + L+  Y K   I  AR+ FD M  +N  +W
Sbjct: 19  CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78

Query: 575 NEMI-------------------------------HGYAQNGYGDEAVRLYKDMIASG-V 602
           N ++                                 YA  G+  ++V+ Y  M+ +G  
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
             + I    +L   S  G V +G+++   + +  G +  +   + ++D   + G    A 
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHV-VKFGFQSYVFVGSPLVDMYSKTGLVFCAR 197

Query: 663 MLIDEMPCKDDPVIWEVLLS 682
              DEMP K + V++  L++
Sbjct: 198 QAFDEMPEK-NVVMYNTLIA 216


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/613 (34%), Positives = 335/613 (54%), Gaps = 65/613 (10%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH------AVPVFEEMSEPNEVTFTAMM 193
           R  H  +IK GL    Y  + LL     C  + H      A+ VF+ + EPN + +  M 
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEF---CVVSPHFDGFPYAISVFDTIQEPNLLIWNTMF 61

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            G A +   V AL+++ +MI   +  DS +   +L  CA+     E              
Sbjct: 62  RGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKE-------------- 107

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             GQQ+H   +KLGF+ D+++  SL+ MYA+NG ++ A  +F     R VVS+  +IAGY
Sbjct: 108 --GQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGY 165

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
                                              V  G I++ +++FD +P   V SWN
Sbjct: 166 -----------------------------------VSRGYIESAQKLFDEIPGKDVVSWN 190

Query: 374 AMLSSYSQSENHKEAIKLFREMQF-RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           AM+S Y ++ N+KEA++LF+EM     V+PD +T+  ++S+CA    +E G+ VH+    
Sbjct: 191 AMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWIND 250

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                +  + + LI +YSK    E A  +F  +   D++ WN++I G +  +L  EA + 
Sbjct: 251 HGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLL 310

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD--GYVNDIF-VGSALIEM 549
           F++M ++   P   +  ++L +CA L +   GR +H  I K   G V ++  + ++LI+M
Sbjct: 311 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDM 370

Query: 550 YCKCGDIYGARQFFDM-MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           Y KCGDI  A+Q FD  M  ++  TWN MI G+A +G  + A  ++  M  +G++PDDIT
Sbjct: 371 YAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDIT 430

Query: 609 FVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           FV +L+ACSHSG++D+G  IF SM   + + P L+HY CMID LG +G F EAE +I+ M
Sbjct: 431 FVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTM 490

Query: 669 PCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLR 728
           P + D VIW  LL +C++H N+ L +  A++L +++P NS  Y LL+NIY++ GRW+++ 
Sbjct: 491 PMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVA 550

Query: 729 AVRELMSENCIVK 741
            +R L+++  + K
Sbjct: 551 KIRALLNDKGMKK 563



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 236/465 (50%), Gaps = 33/465 (7%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H+L+ G   D ++   LI +Y++      A+ +FD   H+D+ S+ A+++    
Sbjct: 108 GQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVS 167

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLAS 125
              +E A KLFDE+P ++VVSWN +IS  V  G  ++AL ++ +M     V P   T+ +
Sbjct: 168 RGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVT 227

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A      +E GR  H  +   G   N+ + NAL+ LY+K G  + A  +F+ +   +
Sbjct: 228 VVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKD 287

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++  ++ G    +   EAL +F+ M+R   + + V++ S+L  CA  G     D+   
Sbjct: 288 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA---IDI--- 341

Query: 246 SDNKFSRNVHGQQVHCLTIK--LGFEADL-HLSNSLLDMYAKNGDMDSAEVIF-SNLPER 301
                     G+ +H    K   G   ++  L  SL+DMYAK GD+D+A+ +F S++  R
Sbjct: 342 ----------GRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNR 391

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
           S+ +WN MI+G+    ++  A ++  RM+  G EPD++T + +L AC  SG +  GR +F
Sbjct: 392 SLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIF 451

Query: 362 DSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            SM      +P +  +  M+     S   KEA ++   M    ++PD      +L +C  
Sbjct: 452 RSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMP---MEPDGVIWCSLLKACKI 508

Query: 417 MGILESGKQVHAASLKT-ASHIDNYVASGLIGIYSKCQR-NELAE 459
            G LE G+      +K    +  +YV   L  IY+   R NE+A+
Sbjct: 509 HGNLELGESFAKKLIKIEPGNSGSYVL--LSNIYAAAGRWNEVAK 551



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 242/545 (44%), Gaps = 121/545 (22%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + +HA +++ GL +  +  ++L+E    C  +          PH                
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEF---CVVS----------PH---------------F 36

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D   +A  +FD + E N++ WN +      +     AL +Y  M + G +P   T   + 
Sbjct: 37  DGFPYAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLL 96

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC------------------- 168
           K+       + G++ HG V+K+G D +IYV  +L+S+YA+                    
Sbjct: 97  KSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVV 156

Query: 169 ------------GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR-LMIRK 215
                       G+ + A  +F+E+   + V++ AM+SG  +T    EALE+F+ +M+  
Sbjct: 157 SYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMT 216

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            V  D  ++ +V+  C            AQSD+       G+ VH      GF ++L + 
Sbjct: 217 NVRPDESTMVTVVSAC------------AQSDSI----ELGRHVHSWINDHGFASNLKIV 260

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+L+D+Y+K G++++A  +F  L  + V+SWN +I GY       +A+ L Q M   G  
Sbjct: 261 NALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 320

Query: 336 PDEVTSINMLVAC--------------------------------------VRSGDIKTG 357
           P++VT +++L AC                                       + GDI   
Sbjct: 321 PNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAA 380

Query: 358 REMFD-SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           +++FD SM + S+S+WNAM+S ++       A  +F  M+  G++PD  T   +LS+C+ 
Sbjct: 381 QQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSH 440

Query: 417 MGILESGKQVHAA---SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVC 472
            G+L+ G+ +  +     +    +++Y    +I +       + AE + + +P E D V 
Sbjct: 441 SGMLDLGRNIFRSMTRGYEITPKLEHY--GCMIDLLGHSGLFKEAEEMINTMPMEPDGVI 498

Query: 473 WNSMI 477
           W S++
Sbjct: 499 WCSLL 503



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 140/295 (47%), Gaps = 37/295 (12%)

Query: 422 SGKQVHAASLKTASHIDNYVASGLIG---IYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
           S + +HA  +KT  H  NY  S L+    +         A  VF  I E +++ WN+M  
Sbjct: 3   SVRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFR 62

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G +L+S  + A   +  M    + P  ++F  +L SCAK     +G+Q+H  + K G+  
Sbjct: 63  GHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDL 122

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDM-------------------------------MH 567
           DI+V ++LI MY + G +  AR+ FD+                               + 
Sbjct: 123 DIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIP 182

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKD-MIASGVKPDDITFVAILTACSHSGLVDVGV 626
           GK+ V+WN MI GY + G   EA+ L+K+ M+ + V+PD+ T V +++AC+ S  +++G 
Sbjct: 183 GKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGR 242

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            + + +  DHG    L     +ID   + G    A  L D +  K D + W  L+
Sbjct: 243 HVHSWIN-DHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNK-DVISWNTLI 295


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/588 (35%), Positives = 322/588 (54%), Gaps = 73/588 (12%)

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +A+ VFE + EPN + +  M+ G A +   V ALEM+  M+      +S S   +L  CA
Sbjct: 16  YAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCA 75

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
           +      S  F +          G+Q+H   +KLG   D ++  SL+ MYA+NG ++ A 
Sbjct: 76  K------SKAFEE----------GRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDAR 119

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F     R VVS   +I GY  +                                   G
Sbjct: 120 KVFDASSHRDVVSCTALITGYASR-----------------------------------G 144

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           D ++ R++FD +    V SWNAM++ Y ++  ++EA++LF+EM    V+PD  TL  ++S
Sbjct: 145 DFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVS 204

Query: 413 SCAAMGILESGKQVHA------------ASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           +CA  G +E G+QVH+            +SLK        + + LI +YSKC   E A  
Sbjct: 205 ACAQSGSIELGRQVHSWVDDDDDDHGFSSSLK--------IVNALIDLYSKCGDVETAFG 256

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           +F  +   D+V WN++I G +  +L  EA + F++M ++   P   +  +VL +CA L +
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGA 316

Query: 521 SFQGRQVHAQIEKD--GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
              GR +H  I+K   G  N+  + ++LI+MY KCGDI  A Q F+ M  ++  +WN MI
Sbjct: 317 IDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMI 376

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            G+A +G  + A  L+  M  + V+PDDITFV +L+ACSHSGL+D+G +IF SM  D+ +
Sbjct: 377 FGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNL 436

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
            P L+HY CMID LG +G F EAE +I  MP + D VIW  LL +C+ H N+ LA+  A+
Sbjct: 437 TPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQ 496

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +L +++P+NS  Y LL+NIY++ GRW+D+  VR +++   + K P  S
Sbjct: 497 KLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCS 544



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 233/472 (49%), Gaps = 33/472 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +HA +L+ G   D ++   LI +Y++      A+ +FD   H+D+ S  A++
Sbjct: 78  KAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALI 137

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +      D   A K+FDE+ ER+VVSWN +I+  V NG  E+AL ++ +M      P   
Sbjct: 138 TGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEG 197

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKI----GLDKNIYVANALLSLYAKCGWTKHAVPV 177
           TL SV  A      +E GR+ H  V       G   ++ + NAL+ LY+KCG  + A  +
Sbjct: 198 TLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGL 257

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           FE +S  + V++  ++ G   T+   EAL +F+ M+R     + V+L SVL  CA  G  
Sbjct: 258 FEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGA- 316

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIK--LGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
              D+             G+ +H    K   G   +  L  SL+DMYAK GD+++A  +F
Sbjct: 317 --IDI-------------GRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVF 361

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
           +++  RS+ SWN MI G+    ++  A +L  RM+    EPD++T + +L AC  SG + 
Sbjct: 362 NSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLD 421

Query: 356 TGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
            GR++F SM      +P +  +  M+     S   KEA ++   M    ++PD      +
Sbjct: 422 LGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMP---MEPDGVIWCSL 478

Query: 411 LSSCAAMGILESGKQVHAASLKT-ASHIDNYVASGLIGIYSKCQRNELAERV 461
           L +C   G LE  +      +K    +  +YV   L  IY+   R E   RV
Sbjct: 479 LKACKKHGNLELAESFAQKLIKIEPENSGSYVL--LSNIYATAGRWEDVARV 528



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 217/480 (45%), Gaps = 82/480 (17%)

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D L +A  +F+ + E N++ WN ++     +     AL +Y +M + G +P   +   + 
Sbjct: 12  DGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLL 71

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT---------------- 171
           K+       E GR+ H  V+K+G   + YV  +L+S+YA+ G                  
Sbjct: 72  KSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVV 131

Query: 172 ---------------KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
                          + A  VF+E++E + V++ AM++G  +  R  EALE+F+ M+R  
Sbjct: 132 SCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN 191

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  +L SV+  CA+ G             +  R VH   V       GF + L + N
Sbjct: 192 VRPDEGTLVSVVSACAQSG-----------SIELGRQVH-SWVDDDDDDHGFSSSLKIVN 239

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D+Y+K GD+++A  +F  L  + VVSWN +I GY       +A+ L Q M   G  P
Sbjct: 240 ALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECP 299

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           ++VT +++L AC                                      + GDI+   +
Sbjct: 300 NDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQ 359

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F+SM   S+SSWNAM+  ++       A  LF  M+   V+PD  T   +LS+C+  G+
Sbjct: 360 VFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGL 419

Query: 420 LESGKQVHAASLKTASHIDNYVASG-LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMI 477
           L+ G+Q+  +  +  +        G +I +       + AE + H +P E D V W S++
Sbjct: 420 LDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLL 479


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/630 (32%), Positives = 347/630 (55%), Gaps = 52/630 (8%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KNI+  N ++  Y K G    A  +F+ M +   VT+T ++ G A+ ++  EA  +F  M
Sbjct: 130 KNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEM 189

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
            R  +  D VSL+++L                    +F      +QVH   IKLG+++ L
Sbjct: 190 GRHGIDPDHVSLATLLS----------------GFTEFDSVNEVRQVHSHVIKLGYDSTL 233

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            +SNSLLD Y K   +  A  +F+++PER  V++N ++ GY ++  + +AI L  +M+  
Sbjct: 234 VVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEV 293

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGRE--------------------------------- 359
           G+ P E T   +L A ++  DI+ G++                                 
Sbjct: 294 GYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEA 353

Query: 360 --MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
             +F  MP     S+N +++ Y+ +   KE+++LF+E+QF G        A +LS  A  
Sbjct: 354 SKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAIS 413

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
             L+ G+Q+H+ ++ T +  +  V + L+ +Y+KC     A R+F  +     V W +MI
Sbjct: 414 LNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMI 473

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
           +      L  +    F +M++ ++     ++A+++ +CA L+S   G+Q+H+ I   GY+
Sbjct: 474 SSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYI 533

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           +++F GSAL++MY KCG I  A Q F  M  +N+V+WN +I  YAQNG GD  +RL+++M
Sbjct: 534 SNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEM 593

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           + SG++PD ++ ++IL ACSH GLV+ G++ F+SM   + + P  +HY   ID L R G 
Sbjct: 594 VRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGR 653

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYSLLAN 716
           F EAE L+ +MP + D ++W  +L+SC +H N  LAK+AA +LF +   +++APY  ++N
Sbjct: 654 FDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSN 713

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           IY++ G WD++  V++ M E  + K PAYS
Sbjct: 714 IYAAAGEWDNVGKVKKAMRERGVKKVPAYS 743



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 164/645 (25%), Positives = 291/645 (45%), Gaps = 94/645 (14%)

Query: 12  AHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLE 71
           A I++ G   +T+  N L++ + +  + + A+ LFD+MPHK+I+S N ++    KS +L 
Sbjct: 90  ASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLS 149

Query: 72  FAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
            A  LFD M +R  V+W  LI    +N    +A  ++ +M   G  P H++LA++    T
Sbjct: 150 EARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFT 209

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
               V   R+ H  VIK+G D  + V+N+LL  Y K      A  +F ++ E + VTF A
Sbjct: 210 EFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNA 269

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           +++G +K     EA+ +F  M          + +++L        G++ D     D +F 
Sbjct: 270 LLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA------GIQLD-----DIEF- 317

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               GQQVH   +K  F  ++ ++N+LLD Y+K+  +  A  +F  +PE   +S+NV++ 
Sbjct: 318 ----GQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVT 373

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------ 359
            Y    +  +++EL + ++  GF+        +L     S ++  GR+            
Sbjct: 374 CYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAIS 433

Query: 360 -----------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                  +F  +   S   W AM+SSY Q   H++ +KLF EMQ
Sbjct: 434 EILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQ 493

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
              +  D  T A I+ +CA++  L  GKQ+H+  + +    + +  S L+ +Y+KC   +
Sbjct: 494 RAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIK 553

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A ++F  +P  + V WN++I+  + N         F++M ++ + P   S  ++L +C+
Sbjct: 554 DALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACS 613

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT--- 573
                                               CG +    Q+FD M     +    
Sbjct: 614 -----------------------------------HCGLVEEGLQYFDSMTRIYKLVPKK 638

Query: 574 --WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             +   I    + G  DEA +L   M     +PD+I + ++L +C
Sbjct: 639 EHYASTIDMLCRGGRFDEAEKLMAQM---PFEPDEIMWSSVLNSC 680



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 233/509 (45%), Gaps = 88/509 (17%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + +H+H+++ G      + N L++ Y K  +   A  LF+ +P +D  ++NA+L+   K 
Sbjct: 218 RQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKE 277

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                                          G   +A++++ KM   G+ PT  T A++ 
Sbjct: 278 -------------------------------GFNREAINLFFKMQEVGYRPTEFTFAAIL 306

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A   L D+E G++ HG V+K     N++VANALL  Y+K      A  +F EM E + +
Sbjct: 307 TAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGI 366

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++  +++  A   RV E+LE+F+ +        +   +++L + A     +  D+     
Sbjct: 367 SYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAA---ISLNLDI----- 418

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G+Q+H  TI     +++ + NSL+DMYAK G+   A  IFS+L  +S V W 
Sbjct: 419 --------GRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWT 470

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------- 348
            MI+ Y QK      ++L   M+      D  T  +++ AC                   
Sbjct: 471 AMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGS 530

Query: 349 ----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                            + G IK   +MF  MP  +  SWNA++S+Y+Q+ +    ++LF
Sbjct: 531 GYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLF 590

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS---LKTASHIDNYVASGLIGIY 449
            EM   G++PD  +L  IL +C+  G++E G Q   +     K     ++Y ++  I + 
Sbjct: 591 EEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYAST--IDML 648

Query: 450 SKCQRNELAERVFHRIP-ELDIVCWNSMI 477
            +  R + AE++  ++P E D + W+S++
Sbjct: 649 CRGGRFDEAEKLMAQMPFEPDEIMWSSVL 677



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 209/476 (43%), Gaps = 69/476 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +++     + F+ N L++ YSK +    A  LF +MP  D             
Sbjct: 318 GQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVD------------- 364

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                              +S+N L++    NG  +++L ++ ++   GF   +   A++
Sbjct: 365 ------------------GISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATL 406

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              +   L+++ GR+ H   I       I V N+L+ +YAKCG    A  +F +++  + 
Sbjct: 407 LSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSS 466

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +TAM+S   +     + L++F  M R  +  D+ + +S++  CA              
Sbjct: 467 VPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACA-------------- 512

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+Q+H   I  G+ +++   ++L+DMYAK G +  A  +F  +P R+ VSW
Sbjct: 513 --SLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSW 570

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N +I+ Y Q       + L + M   G +PD V+ +++L AC   G ++ G + FDSM  
Sbjct: 571 NALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTR 630

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    + + +    +     EA KL  +M F   +PD    + +L+SC      E
Sbjct: 631 IYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPF---EPDEIMWSSVLNSCGIHKNQE 687

Query: 422 SGKQV-----------HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
             K+             AA   T S+I  Y A+G      K ++  + ER   ++P
Sbjct: 688 LAKKAANQLFNMKVLRDAAPYVTMSNI--YAAAGEWDNVGKVKK-AMRERGVKKVP 740



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 154/325 (47%), Gaps = 17/325 (5%)

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQV-----HAASLKTASHIDNYVASGLIGIYSKCQ 453
           G  P+      ++ S    G L   +++     H     T + I  Y+ SG +      +
Sbjct: 96  GFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLS-----E 150

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
              L + +F R      V W  +I G + N+   EAF  F +M ++ + P   S AT+LS
Sbjct: 151 ARTLFDSMFQRTA----VTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLS 206

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
              +  S  + RQVH+ + K GY + + V ++L++ YCK   +  A Q F+ +  +++VT
Sbjct: 207 GFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVT 266

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           +N ++ GY++ G+  EA+ L+  M   G +P + TF AILTA      ++ G ++   + 
Sbjct: 267 FNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVV 326

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
             + V  +      ++D   +     EA  L  EMP + D + + VL++    +  V+ +
Sbjct: 327 KCNFVWNVFVA-NALLDFYSKHDRVVEASKLFYEMP-EVDGISYNVLVTCYAWNGRVKES 384

Query: 694 KRAAEEL-FRLDPKNSAPYSLLANI 717
               +EL F    + + P++ L +I
Sbjct: 385 LELFKELQFTGFDRRNFPFATLLSI 409



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 33/188 (17%)

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN--------------- 570
            V A I K G+  + +  + L++ + + GD+ GAR+ FD M  KN               
Sbjct: 87  HVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSG 146

Query: 571 ----------------TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
                            VTW  +I GYAQN    EA  L+ +M   G+ PD ++   +L+
Sbjct: 147 NLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLS 206

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
             +    V+  V   +S  +  G +  L     ++D   +      A  L +++P + D 
Sbjct: 207 GFTEFDSVN-EVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIP-ERDS 264

Query: 675 VIWEVLLS 682
           V +  LL+
Sbjct: 265 VTFNALLT 272


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 245/783 (31%), Positives = 381/783 (48%), Gaps = 84/783 (10%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++    G  +HA   R GL  + ++   L+ LY                      S   +
Sbjct: 57  QEGAACGAAIHALTHRAGLMGNVYIGTALLHLYG---------------------SRGLV 95

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L+AQ          +LF EMP+RNVVSW  ++ AL  NG  E+AL  Y +M  EG +   
Sbjct: 96  LNAQ----------RLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNA 145

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
             LA+V     AL D   G +    V+  GL  ++ VAN+L++++      + A  +F+ 
Sbjct: 146 NALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDR 205

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M E + +++ AM+S  +  +   +   +   M    V  D  +L S++ VCA       S
Sbjct: 206 MEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCA------SS 259

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           D+ A           G  +H L +  G    + L N+L++MY+  G +D AE +F N+  
Sbjct: 260 DLVAL----------GSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSR 309

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELL-QRMKSCGFEPDEVTSINMLVACVRSGDIKTGR- 358
           R V+SWN MI+ Y Q     +A+E L Q +++    P+ +T  + L AC     +  GR 
Sbjct: 310 RDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRT 369

Query: 359 ----------------------------------EMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                              +F+SMP   V S N +   Y+  E+
Sbjct: 370 IHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALED 429

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES-GKQVHAASLKTASHIDNYVAS 443
              A+++F  M+  G+KP+  T+  +  +C ++G L S G  +HA   +T    D Y+ +
Sbjct: 430 VANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITN 489

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            LI +Y+ C   E +  +F RI    ++ WN++IA    +    EA   F   +      
Sbjct: 490 SLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKL 549

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            +F  A  LSS A L+S  +G Q+H    K+G   D  V +A ++MY KCG +    +  
Sbjct: 550 DRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTL 609

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
                + T  WN +I GYA+ GY  EA   +K M++ G KPD +TFVA+L+ACSH+GL+D
Sbjct: 610 PDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLID 669

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G++ +NSM    GV P + H  C++D LGR G F EAE  IDEMP   + +IW  LLSS
Sbjct: 670 KGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSS 729

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
            R H N+ + ++AA+ L  LDP + + Y LL+N+Y++  RW D+  +R  M    + K P
Sbjct: 730 SRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRP 789

Query: 744 AYS 746
           A S
Sbjct: 790 ACS 792



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 178/684 (26%), Positives = 291/684 (42%), Gaps = 101/684 (14%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEH- 138
           MP R   SW   +S   R GLE  A ++   M       +   LAS+  A       EH 
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTA------CEHR 54

Query: 139 --------GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
                   G   H L  + GL  N+Y+  ALL LY   G   +A  +F EM + N V++T
Sbjct: 55  GWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWT 114

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           A+M  L+    + EAL  +R M ++ V  ++ +L++V+ +C                   
Sbjct: 115 AIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCG----------------AL 158

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
              V G QV    +  G    + ++NSL+ M+     +  AE +F  + ER  +SWN MI
Sbjct: 159 EDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMI 218

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------------------- 351
           + Y  +   +K   +L  M+    +PD  T  +++  C  S                   
Sbjct: 219 SMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLH 278

Query: 352 ----------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK-LFRE 394
                           G +     +F +M    V SWN M+SSY QS +  EA++ L + 
Sbjct: 279 CSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQL 338

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +Q     P+  T +  L +C++   L +G+ +HA  L+ +      + + L+ +YSKC  
Sbjct: 339 LQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNS 398

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E  ERVF  +P  D+V  N +  G +       A   F  MR   + P   +   +  +
Sbjct: 399 MEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGT 458

Query: 515 CAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           C  L      G  +HA + + G ++D ++ ++LI MY  CGD+  +   F  ++ K+ ++
Sbjct: 459 CKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVIS 518

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH-----SGLVDVGVEI 628
           WN +I    ++G G+EA++L+ D   +G K D       L++ ++      G+   G+ +
Sbjct: 519 WNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSV 578

Query: 629 FNSMQLD-HGVEPILDHY------TCMIDCL------------------GRAGHFHEAEM 663
            N +  D H V   +D Y       CM+  L                   R G+F EAE 
Sbjct: 579 KNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAED 638

Query: 664 LIDEMPC---KDDPVIWEVLLSSC 684
               M     K D V +  LLS+C
Sbjct: 639 TFKHMVSVGQKPDYVTFVALLSAC 662



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 164/354 (46%), Gaps = 7/354 (1%)

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES- 422
           MP  + SSW   +S  ++      A  L R M+ R V      LA ++++C   G  E  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 423 --GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
             G  +HA + +     + Y+ + L+ +Y        A+R+F  +P+ ++V W +++  L
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           S N    EA + +++MR+  +     + ATV+S C  L     G QV A +   G +  +
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            V ++LI M+     +  A + FD M  ++ ++WN MI  Y+      +   +  DM   
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
            VKPD  T  ++++ C+ S LV +G  I +S+ +  G+   +     +++    AG   E
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGI-HSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD--PKNSAPYS 712
           AE L   M  + D + W  ++SS     +   A     +L + D  P NS  +S
Sbjct: 300 AESLFRNMS-RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFS 352


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 217/662 (32%), Positives = 342/662 (51%), Gaps = 54/662 (8%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L  + +AS     ++ G+  H  V+ +GL  ++YV   L+SLY  C    +A  VF+ + 
Sbjct: 6   LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65

Query: 183 EPNEVTF-TAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            P E++    +M+G  +     EAL +F +LM    +  DS +  SVL  C         
Sbjct: 66  NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACG-------- 117

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                      R V GQ +H   +K G   D+ + +SL+ MYAK  + + A  +F  +P+
Sbjct: 118 --------GLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPD 169

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           + V  WN +I+ Y Q  +  +A+     M+  GFEPD VT    + +C R  D+  GRE+
Sbjct: 170 KDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREI 229

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              F+ MP+ +V +WN+M++ Y    + 
Sbjct: 230 HKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDG 289

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
              I+LF+ M   GVKP  TTL   L +C+    L  GK VH   ++     D ++ S L
Sbjct: 290 ISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSL 349

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y KC + E AE +F  +P+   V WN MI+G        +A   F +M ++ + P  
Sbjct: 350 MDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDA 409

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +F +VL++C++L++  +GR++H  I +    N+  V  AL++MY KCG +  A   F  
Sbjct: 410 ITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKC 469

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  ++ V+W  MI  Y  +G   EA+ L+ +M+ S VKPD +TF+AIL+ACSH+GLVD G
Sbjct: 470 LPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDG 529

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP-CKDDPVIWEVLLSSC 684
           +  FN M   +G+ P ++HY+C+I  LGRAG  HEA  ++   P   DD  +   L S+C
Sbjct: 530 LYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSAC 589

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           RLH N+ L    AE L   DP +S+ Y +L+N+Y+S G+WD++R VR  M +  + K+P 
Sbjct: 590 RLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPG 649

Query: 745 YS 746
            S
Sbjct: 650 CS 651



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 156/551 (28%), Positives = 258/551 (46%), Gaps = 82/551 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+   GK+LH  ++  GL +D ++C  LI LY  CN    A+++FD +        N   
Sbjct: 17  KSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE-------NPFE 69

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK-MSNEGFVPTH 120
            + C                       N L++   RN + ++AL +++K M      P  
Sbjct: 70  ISLC-----------------------NGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDS 106

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T  SV KA   L  V  G+  H  ++K GL  +I V ++L+ +YAKC   + AV +F+E
Sbjct: 107 YTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDE 166

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M + +   +  ++S   ++ +  EAL  F +M R     DSV++++ +  CAR    ++ 
Sbjct: 167 MPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARL---LDL 223

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           D              G+++H   +  GF  D  +S +L+DMY K G ++ A  +F  +P 
Sbjct: 224 D-------------RGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPN 270

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS--------- 351
           ++VV+WN MI GYG K      I+L +RM S G +P   T  + L+AC +S         
Sbjct: 271 KTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFV 330

Query: 352 --------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                     G +++   +F  MP  +  SWN M+S Y      
Sbjct: 331 HGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKL 390

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            +A++LF EM    V+PD  T   +L++C+ +  LE G+++H   ++     +  V   L
Sbjct: 391 FDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGAL 450

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC   E A  VF  +PE D+V W SMI     +    EA   F +M Q+ + P +
Sbjct: 451 LDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDR 510

Query: 506 FSFATVLSSCA 516
            +F  +LS+C+
Sbjct: 511 VTFLAILSACS 521



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 217/454 (47%), Gaps = 82/454 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+++H  +++ GL  D  + + L+ +Y+KCN                           
Sbjct: 123 VLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCN--------------------------- 155

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
               + E A KLFDEMP+++V  WN +IS   ++G  E+AL  +  M   GF P  +T+ 
Sbjct: 156 ----EFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTIT 211

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +   +   LLD++ GR  H  ++  G   + +V+ AL+ +Y KCG  + A+ VFE+M   
Sbjct: 212 TAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNK 271

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
             V + +M++G       +  +++F+ M  + V     +L+S L  C++           
Sbjct: 272 TVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQS---------- 321

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 ++ + G+ VH   I+   + D+ L++SL+D+Y K G ++SAE IF  +P+ + V
Sbjct: 322 ------AQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTV 375

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           SWNVMI+GY  + +   A+ L   M     EPD +T  ++L AC +   ++ GRE+    
Sbjct: 376 SWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLI 435

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          F  +P   + SW +M+++Y       EA+
Sbjct: 436 VERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEAL 495

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +LF EM    VKPDR T   ILS+C+  G+++ G
Sbjct: 496 ELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDG 529



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 130/275 (47%), Gaps = 34/275 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +I+RN +  D FL + L++LY KC    SA+ +F                    
Sbjct: 327 GKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIF-------------------- 366

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   KL   MP+   VSWN +IS  V  G    AL ++ +MS     P  IT  SV
Sbjct: 367 --------KL---MPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSV 415

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + L  +E GR  H L+++  L  N  V  ALL +YAKCG  + A  VF+ + E + 
Sbjct: 416 LAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDL 475

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV--FA 244
           V++T+M++      RV EALE+F  M++  V  D V+  ++L  C+  G  V+  +  F 
Sbjct: 476 VSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGL-VDDGLYHFN 534

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           Q  N +      +   CL   LG    LH +  +L
Sbjct: 535 QMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEIL 569


>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
 gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
          Length = 779

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/751 (29%), Positives = 369/751 (49%), Gaps = 92/751 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HAHI   GL  D +  N LI +Y K                             C+
Sbjct: 78  GRKVHAHIRELGLETDIYAANALINMYGK-----------------------------CR 108

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNG-LEEKALSVYNKMSNEGFVPTHITLAS 125
           S   E A++LF  M   NVVSW ++I    + G L  +++ ++ KM  EG  P  IT+ +
Sbjct: 109 SP--EDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVA 166

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V +A     ++  GR+ HG V++ G+  +  + NAL+ +Y K G    A  V  EM + +
Sbjct: 167 VLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRD 222

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++  M+SG A++    E L     M +  +S   V+ +++L  C+ E      D+   
Sbjct: 223 VISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSE-----EDLG-- 275

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+ +H   + +G + D  + + LL MY K G ++  +     + ER+ ++
Sbjct: 276 ---------EGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIA 326

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN +I  Y +     +A+   Q+M+  G + D VT + ML  C                 
Sbjct: 327 WNTIIGAYARYSDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWIS 386

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G +   R+MF+ MPS +  SWN+++S+  Q   H +A K 
Sbjct: 387 QLGFESIIVHNSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKF 446

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+ M+  G +PD  T   +L +C      + G  +H   +++       VA+ LI +Y+K
Sbjct: 447 FQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAK 506

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
              +E A  VF  + E + V WN+++A      L+ +A   F +M   ++   + ++   
Sbjct: 507 LGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM---DVARDKVTYVAA 563

Query: 512 LSSCAKLSSSF-QGRQVHAQIEKDGYVN--DIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           L +C+ L+     G+ +H  +   G+ N  D    +AL+ MY KCG +  AR+ FD M  
Sbjct: 564 LDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDGMLH 623

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           ++ VTW  +I  YAQ+   ++A++L K M   GVK DD+ F++IL+ C HSGL++ G + 
Sbjct: 624 RDVVTWTSLIVAYAQHSEIEQALKLVKIMEQEGVKVDDVVFLSILSGCDHSGLLEEGCKY 683

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F SM  D+G+ P L+HY C+ID LGRAGH   AE L+D +P + D  +W  LL++CR+H 
Sbjct: 684 FVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLAACRMHG 743

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           N    KRAA  +  LDP   A Y +L+NIY+
Sbjct: 744 NPERGKRAARRITLLDPSIPAAYVVLSNIYT 774



 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 191/685 (27%), Positives = 337/685 (49%), Gaps = 74/685 (10%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEE-KALSVYNKMSNEGFVPTHITLA 124
           K  DL+ A ++F ++   +V +W+ L+ A   +  +  +AL +Y +M  EG  P  +T  
Sbjct: 4   KCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSVTFV 63

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +  KA T    +  GR+ H  + ++GL+ +IY ANAL+++Y KC   + A  +F  M  P
Sbjct: 64  TCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRMESP 123

Query: 185 NEVTFTAMMSGLAKTDRV-VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
           N V++T+++   A+   +  E++ +FR M  + +  + +++ +VL  C            
Sbjct: 124 NVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC------------ 171

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+QVH   ++ G   D  L N+L+DMY K G +D A+V+   +P+R V
Sbjct: 172 --------NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDV 223

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           +SWN+MI+GY Q     + +  L RM+  G  P +VT   +L AC    D+  G+ +  S
Sbjct: 224 ISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRS 283

Query: 364 MPSPSVS-----------------------------------SWNAMLSSYSQSENHKEA 388
           +    +                                    +WN ++ +Y++  +H +A
Sbjct: 284 VVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQA 343

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH--AASLKTASHIDNYVASGLI 446
           ++ F++MQ  GVK D  T  ++L +C++   L  G  +H   + L   S I   V + L 
Sbjct: 344 LRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESII---VHNSLT 400

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y+KC   + A ++F  +P  + V WNS+++    +    +A  FF++M+     P + 
Sbjct: 401 AMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEV 460

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +  ++L +C K +++ +G  +H  + + G+     V +ALI MY K GD   AR  FD M
Sbjct: 461 TCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAM 520

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH-SGLVDVG 625
             +NTV+WN ++  Y + G   +AV ++  M    V  D +T+VA L ACS  +G +  G
Sbjct: 521 AERNTVSWNTILAAYVEKGLNRDAVEMFWKM---DVARDKVTYVAALDACSGLAGGLAHG 577

Query: 626 VEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            ++ +   LDHG    LD    T +++  G+ G   EA  + D M  + D V W  L+ +
Sbjct: 578 -KLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDGMLHR-DVVTWTSLIVA 635

Query: 684 CRLHANV----RLAKRAAEELFRLD 704
              H+ +    +L K   +E  ++D
Sbjct: 636 YAQHSEIEQALKLVKIMEQEGVKVD 660



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 221/446 (49%), Gaps = 46/446 (10%)

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ-KYQSTKAIELLQRMKSCGFEPDEV 339
           MY K GD+D+A  +F  L    V +W+ ++  Y   +  + +A+EL +RM+  G  PD V
Sbjct: 1   MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSV 60

Query: 340 TSINMLVACVRSGDIKTGR-----------------------------------EMFDSM 364
           T +  L AC   G +  GR                                   ++F  M
Sbjct: 61  TFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRM 120

Query: 365 PSPSVSSWNAMLSSYSQSEN-HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            SP+V SW +++ +++Q  +  +E++ LFR+M+  G++P+  T+  +L +C     L  G
Sbjct: 121 ESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRACN----LTDG 176

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           +QVH   L+    +D  + + L+ +Y K    + A+ V   +P+ D++ WN MI+G + +
Sbjct: 177 RQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQS 236

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               E      +M+Q+ + PT+ ++AT+L++C+      +G+ +H  +   G   D  V 
Sbjct: 237 GDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVK 296

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           S L+ MY KCG +   ++    +H +NT+ WN +I  YA+     +A+R ++ M   GVK
Sbjct: 297 SFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVK 356

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSM-QLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
            D +TFV +L  CS    +  G+ + + + QL  G E I+ H + +     + G    A 
Sbjct: 357 ADAVTFVLMLGTCSSPAHLAQGILLHDWISQL--GFESIIVHNS-LTAMYAKCGSLDAAR 413

Query: 663 MLIDEMPCKDDPVIWEVLLSSCRLHA 688
            + +EMP + + V W  L+S+   H 
Sbjct: 414 KMFEEMPSR-NSVSWNSLMSAAIQHG 438



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 17/280 (6%)

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD-IEAFMFFKQMRQNEMYPTQF 506
           +Y KC   + A  VF ++  L +  W++++   + +  D ++A   +K+M+   + P   
Sbjct: 1   MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSV 60

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +F T L +C    +   GR+VHA I + G   DI+  +ALI MY KC     A Q F  M
Sbjct: 61  TFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRM 120

Query: 567 HGKNTVTWNEMIHGYAQNGY-GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV- 624
              N V+W  +I  +AQ G+ G E+V L++ M   G++P+ IT VA+L AC+ +    V 
Sbjct: 121 ESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRACNLTDGRQVH 180

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G  +   M LD  +   L      +D   + G   EA++++ EMP K D + W +++S  
Sbjct: 181 GYVLEAGMSLDTSLGNAL------VDMYCKTGGVDEADVVLREMP-KRDVISWNIMISG- 232

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAP----YSLLANIYSS 720
             +A     K     L+R+     +P    Y+ L N  SS
Sbjct: 233 --YAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSS 270


>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 233/787 (29%), Positives = 389/787 (49%), Gaps = 123/787 (15%)

Query: 1   KKAHVAGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           ++A   G+ +HA IL+NG F   + ++  +L+  Y+KC                      
Sbjct: 92  ERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKC---------------------- 129

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
                    D  E A +LF  +  RNV SW  ++    R G  E AL  + +M   G  P
Sbjct: 130 ---------DFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFP 180

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
            +  L +V KA  +L  +  G+  HG V+K+G    ++V+++L+ +Y KCG  + A  VF
Sbjct: 181 DNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVF 240

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           + M E N VT+ +M+ G  +     EA+++F  M  + +    V+++S L   A     +
Sbjct: 241 DSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALI 300

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
           E                G+Q H + I    + D  L +S+++ Y+K G ++ AE++FS +
Sbjct: 301 E----------------GKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRM 344

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
            E+ VV+WN++I+ Y Q +Q  KA+ +   M+S     D VT  ++L A   + +IK G+
Sbjct: 345 LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGK 404

Query: 359 E-----------------------------------MFDSMPSPSVSSWNAMLSSYSQSE 383
           E                                   +FDS     +  WN +L++Y+Q  
Sbjct: 405 EGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVG 464

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
              EA+KLF +MQF  V P+     +I  +   +G L +G                    
Sbjct: 465 LSGEALKLFYQMQFDSVPPN-----VISWNSVILGFLRNG-------------------- 499

Query: 444 GLIGIYSKCQRNELAERVFHRIPEL----DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
                    Q NE A+ +F ++  L    +++ W ++I+GL+ +    EA +FF++M++ 
Sbjct: 500 ---------QVNE-AKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEA 549

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
            + P+  S  +VL +C  + S + GR +H  I +  +   + V ++L++MY KCG I  A
Sbjct: 550 GIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEA 609

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           ++ F MM  K    +N MI  YA +G   EA+ L+K +   G++PD ITF +IL+ACSH+
Sbjct: 610 KKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHA 669

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           GLV+ G+ +F  M   H + PI++HY C++  L R G+  EA  LI  MP + D  I   
Sbjct: 670 GLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGS 729

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL++CR H  + L +  ++ LF+L+P NS  Y  L+N Y++ GRW ++  +R+LM    +
Sbjct: 730 LLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGL 789

Query: 740 VKDPAYS 746
            K+P  S
Sbjct: 790 RKNPGCS 796



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 165/322 (51%), Gaps = 14/322 (4%)

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +SS  +  + +E++ L  EM+F   +        +L  C     L +G+Q+HA  LK   
Sbjct: 51  ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 110

Query: 436 HI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               + YV + L+  Y+KC   E+A R+FHR+   ++  W +++          +A + F
Sbjct: 111 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGF 170

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
            +M++N ++P  F    VL +C  L     G+ VH  + K G+   +FV S+L++MY KC
Sbjct: 171 IEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKC 230

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +  AR+ FD M  KN VTWN MI GY QNG   EA+ ++ DM   G++P  +T  + L
Sbjct: 231 GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFL 290

Query: 614 TACSH-----SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           +A ++      G     + I NS+ LD+    IL   + +I+   + G   +AE++   M
Sbjct: 291 SASANLDALIEGKQGHAIAILNSLDLDN----ILG--SSIINFYSKVGLIEDAELVFSRM 344

Query: 669 PCKDDPVIWEVLLSSCRLHANV 690
             + D V W +L+SS   H  V
Sbjct: 345 -LEKDVVTWNLLISSYVQHHQV 365


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 253/788 (32%), Positives = 385/788 (48%), Gaps = 93/788 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  I +     D  +CN LI +Y  C                              
Sbjct: 193 GVQIHGLISKTRYGSDVVVCNVLISMYGSC------------------------------ 222

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG----FVPTHIT 122
            D    A  +FD +  RN +SWN++IS   R G    A  +++ M  EG    F P   T
Sbjct: 223 LDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYT 282

Query: 123 LASVFKASTALLDVEHG----RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
             S+   +TA   V+ G     +    V K G  +++YV++AL+S +A+ G T  A  +F
Sbjct: 283 FGSLI--TTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIF 340

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           E+M   N V+   +M GL K  +   A ++F  M +  V I+S S   +L   +      
Sbjct: 341 EQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSAFS------ 393

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           E  V  +   K      G++VH   I+ G  +  + + N L++MYAK+G +  A  +F  
Sbjct: 394 EFSVLEEGRRK------GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFEL 447

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           + E+  VSWN +I+G  Q   S  A E   RM+  G  P   T I+ L +C   G I  G
Sbjct: 448 MVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLG 507

Query: 358 REM-----------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
            ++                                   F  MP     SWN+++ + S S
Sbjct: 508 EQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDS 567

Query: 383 ENH-KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           E    +A+K F +M   G    R T   ILS+ +++ + E   Q+HA  LK     D  +
Sbjct: 568 EASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAI 627

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
            + L+  Y KC      E++F R+ E  D V WNSMI+G   N L  +A      M Q  
Sbjct: 628 GNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKG 687

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
                F+FAT+LS+CA +++  +G +VHA   +    +D+ VGSAL++MY KCG I  A 
Sbjct: 688 QRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYAS 747

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           +FF++M  +N  +WN MI GYA++G+G++A++L+  M+  G  PD +TFV +L+ACSH G
Sbjct: 748 RFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVG 807

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
            V+ G E F SM   + + P ++H++CM+D LGRAG   E    I+ MP K + +IW  +
Sbjct: 808 FVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTV 867

Query: 681 LSS-CRLHA-NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC 738
           L + CR +  N  L +RAAE L  L+P+N+  Y LLAN+Y+S  +W+D+   R  M E  
Sbjct: 868 LGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAA 927

Query: 739 IVKDPAYS 746
           + K+   S
Sbjct: 928 VKKEAGCS 935



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 183/724 (25%), Positives = 318/724 (43%), Gaps = 87/724 (12%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH   ++ G   + FL N LI +Y +  +  SAQ LFD+M ++++               
Sbjct: 93  LHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNL--------------- 137

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                           V+W  LIS   +NG  ++A + +  M   GF+P H    S  +A
Sbjct: 138 ----------------VTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRA 181

Query: 130 --STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC-GWTKHAVPVFEEMSEPNE 186
              +     + G + HGL+ K     ++ V N L+S+Y  C      A  VF+ +   N 
Sbjct: 182 CQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNS 241

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ +++S  ++    V A ++F  M ++ +           G      C         S
Sbjct: 242 ISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTAC---------S 292

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
              F   V  +Q+     K GF  DL++S++L+  +A+ G  D A+ IF  +  R+VVS 
Sbjct: 293 SVDFGLCVL-EQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSM 351

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKS----------------------------------- 331
           N ++ G  ++ Q   A ++   MK                                    
Sbjct: 352 NGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAH 411

Query: 332 ---CGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
               G   ++V   N LV    +SG I     +F+ M      SWN+++S   Q+E  ++
Sbjct: 412 VIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSED 471

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A + F  M+  G  P   TL   LSSCA++G +  G+Q+H   LK     D  V++ L+ 
Sbjct: 472 AAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLA 531

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI-EAFMFFKQMRQNEMYPTQF 506
           +Y++        +VF  +PE D V WNS+I  LS +   + +A  +F QM +     ++ 
Sbjct: 532 LYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRV 591

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +F  +LS+ + LS      Q+HA + K    +D  +G+AL+  Y KCG++    + F  M
Sbjct: 592 TFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM 651

Query: 567 -HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
              ++ V+WN MI GY  N    +A+ L   M+  G + D  TF  IL+AC+    ++ G
Sbjct: 652 SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERG 711

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
           +E+ ++  +   +E  +   + ++D   + G    A    + MP + +   W  ++S   
Sbjct: 712 MEV-HACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYA 769

Query: 686 LHAN 689
            H +
Sbjct: 770 RHGH 773



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 159/596 (26%), Positives = 270/596 (45%), Gaps = 68/596 (11%)

Query: 137 EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
           E  R  H   IK G   N++++N L+++Y + G    A  +F+EMS  N VT+  ++SG 
Sbjct: 88  EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
            +  +  EA   FR M+R     +  +  S L  C   G          S  K      G
Sbjct: 148 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG---------PSGCKL-----G 193

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGD-MDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
            Q+H L  K  + +D+ + N L+ MY    D  + A  +F  +  R+ +SWN +I+ Y +
Sbjct: 194 VQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSR 253

Query: 316 KYQSTKAIELLQRMKSCG----FEPDEVTSINMLVA---------CV------------- 349
           +  +  A +L   M+  G    F+P+E T  +++           CV             
Sbjct: 254 RGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGF 313

Query: 350 ---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          R G     + +F+ M   +V S N ++    + +  + A K+F E
Sbjct: 314 LQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHE 373

Query: 395 MQ-FRGVKPDRTTLAIILSSCAAMGILE----SGKQVHAASLKTASHIDNYVA--SGLIG 447
           M+   G+  D  +  ++LS+ +   +LE     G++VHA  ++T  + DN VA  +GL+ 
Sbjct: 374 MKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN-DNKVAIGNGLVN 430

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+K      A  VF  + E D V WNS+I+GL  N    +A   F +MR+    P+ F+
Sbjct: 431 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFT 490

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
             + LSSCA L     G Q+H    K G   D+ V +AL+ +Y + G      + F +M 
Sbjct: 491 LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 550

Query: 568 GKNTVTWNEMIHGYAQNGYG-DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             + V+WN +I   + +     +AV+ +  M+  G     +TF+ IL+A S   L +V  
Sbjct: 551 EYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSH 610

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           +I +++ L + +         ++ C G+ G  +E E +   M    D V W  ++S
Sbjct: 611 QI-HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMIS 665



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 225/477 (47%), Gaps = 52/477 (10%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
            +++H  +IK GF  +L LSN+L+++Y + GD+ SA+ +F  +  R++V+W  +I+GY Q
Sbjct: 90  ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG----------------------- 352
             +  +A    + M   GF P+     + L AC  SG                       
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 209

Query: 353 ---------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                               R +FD +   +  SWN+++S YS+  +   A  LF  MQ 
Sbjct: 210 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 269

Query: 398 RGV----KPDRTTL-AIILSSCAAMGI-LESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
            G+    KP+  T  ++I ++C+++   L   +Q+ A   K+    D YV+S L+  +++
Sbjct: 270 EGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFAR 329

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
               + A+ +F ++   ++V  N ++ GL        A   F +M+ + +     S+  +
Sbjct: 330 FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK-DLVGINSDSYVVL 388

Query: 512 LSSCAKLS----SSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           LS+ ++ S       +GR+VHA + + G   N + +G+ L+ MY K G I  A   F++M
Sbjct: 389 LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM 448

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             K++V+WN +I G  QN   ++A   +  M  +G  P + T ++ L++C+  G + +G 
Sbjct: 449 VEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGE 508

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           +I +   L  G++  +     ++      G F E   +   MP + D V W  ++ +
Sbjct: 509 QI-HCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP-EYDQVSWNSVIGA 563



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 208/433 (48%), Gaps = 36/433 (8%)

Query: 316 KYQ----STKAIEL-LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVS 370
           +YQ    S +A EL LQ +K  GF  +   S  ++   VR GD+ + +++FD M + ++ 
Sbjct: 80  RYQGSCCSEEARELHLQSIKY-GFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLV 138

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI--LESGKQVHA 428
           +W  ++S Y+Q+    EA   FR+M   G  P+       L +C   G    + G Q+H 
Sbjct: 139 TWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHG 198

Query: 429 ASLKTASHIDNYVASGLIGIYSKC-QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
              KT    D  V + LI +Y  C      A  VF  I   + + WNS+I+  S     +
Sbjct: 199 LISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAV 258

Query: 488 EAFMFFKQMRQNEM----YPTQFSFATVLSS-CAKLSSSF-QGRQVHAQIEKDGYVNDIF 541
            A+  F  M++  +     P +++F +++++ C+ +        Q+ A++EK G++ D++
Sbjct: 259 SAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLY 318

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY---KDMI 598
           V SAL+  + + G    A+  F+ M  +N V+ N ++ G  +   G+ A +++   KD++
Sbjct: 319 VSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLV 378

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC-----MIDCLG 653
             G+  D  ++V +L+A S   +++ G      +   H +   L+         +++   
Sbjct: 379 --GINSD--SYVVLLSAFSEFSVLEEGRRKGREVHA-HVIRTGLNDNKVAIGNGLVNMYA 433

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP--Y 711
           ++G   +A  +  E+  + D V W  L+S   L  N   ++ AAE   R+    S P  +
Sbjct: 434 KSGAIADACSVF-ELMVEKDSVSWNSLISG--LDQN-ECSEDAAESFHRMRRTGSMPSNF 489

Query: 712 SLLANIYS--SLG 722
           +L++ + S  SLG
Sbjct: 490 TLISTLSSCASLG 502



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 30/232 (12%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H     +HA +L+  L DDT + N L+  Y KC   +  + +F +M              
Sbjct: 606 HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSET----------- 654

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                              R+ VSWN++IS  + N L  KA+ +   M  +G      T 
Sbjct: 655 -------------------RDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTF 695

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A++  A  ++  +E G   H   I+  L+ ++ V +AL+ +Y+KCG   +A   FE M  
Sbjct: 696 ATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPL 755

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            N  ++ +M+SG A+     +AL++F  M+      D V+   VL  C+  G
Sbjct: 756 RNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVG 807



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 2/130 (1%)

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           ++ +  +F ++++       S + R++H Q  K G+V ++F+ + LI +Y + GD+  A+
Sbjct: 67  LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 126

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           + FD M  +N VTW  +I GY QNG  DEA   ++DM+ +G  P+   F + L AC  SG
Sbjct: 127 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186

Query: 621 L--VDVGVEI 628
                +GV+I
Sbjct: 187 PSGCKLGVQI 196


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 245/777 (31%), Positives = 379/777 (48%), Gaps = 84/777 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA   R GL  + ++   L+ LY                      S   +L+AQ  
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYG---------------------SRGLVLNAQ-- 99

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   +LF EMP+RNVVSW  ++ AL  NG  E+AL  Y +M  EG +     LA+V
Sbjct: 100 --------RLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATV 151

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                AL D   G +    V+  GL  ++ VAN+L++++      + A  +F+ M E + 
Sbjct: 152 VSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDR 211

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ AM+S  +  +   +   +   M    V  D  +L S++ VCA       SD+ A  
Sbjct: 212 ISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCA------SSDLVAL- 264

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G  +H L +  G    + L N+L++MY+  G +D AE +F N+  R V+SW
Sbjct: 265 ---------GSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISW 315

Query: 307 NVMIAGYGQKYQSTKAIELL-QRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------- 358
           N MI+ Y Q     +A+E L Q +++    P+ +T  + L AC     +  GR       
Sbjct: 316 NTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMIL 375

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +F+SMP   V S N +   Y+  E+   A++
Sbjct: 376 QRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMR 435

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILES-GKQVHAASLKTASHIDNYVASGLIGIY 449
           +F  M+  G+KP+  T+  +  +C ++G L S G  +HA   +T    D Y+ + LI +Y
Sbjct: 436 VFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMY 495

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           + C   E +  +F RI    ++ WN++IA    +    EA   F   +       +F  A
Sbjct: 496 ATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLA 555

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
             LSS A L+S  +G Q+H    K+G   D  V +A ++MY KCG +    +       +
Sbjct: 556 ECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHR 615

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
            T  WN +I GYA+ GY  EA   +K M++ G KPD +TFVA+L+ACSH+GL+D G++ +
Sbjct: 616 PTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYY 675

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           NSM    GV P + H  C++D LGR G F EAE  IDEMP   + +IW  LLSS R H N
Sbjct: 676 NSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKN 735

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + + ++AA+ L  LDP + + Y LL+N+Y++  RW D+  +R  M    + K PA S
Sbjct: 736 LDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACS 792



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 177/684 (25%), Positives = 290/684 (42%), Gaps = 101/684 (14%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEH- 138
           MP R   SW   +S   R GLE  A ++   M       +   LAS+  A       EH 
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTA------CEHR 54

Query: 139 --------GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
                   G   H L  + GL  N+Y+  ALL LY   G   +A  +F EM + N V++T
Sbjct: 55  GWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWT 114

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           A+M  L+    + EAL  +R M ++ V  ++ +L++V+ +C                   
Sbjct: 115 AIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCG----------------AL 158

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
              V G QV    +  G    + ++NSL+ M+     +  AE +F  + ER  +SWN MI
Sbjct: 159 EDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMI 218

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------------------- 351
           + Y  +   +K   +L  M+    +PD  T  +++  C  S                   
Sbjct: 219 SMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLH 278

Query: 352 ----------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE- 394
                           G +     +F +M    V SWN M+SSY QS +  EA++   + 
Sbjct: 279 CSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQL 338

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +Q     P+  T +  L +C++   L +G+ +HA  L+ +      + + L+ +YSKC  
Sbjct: 339 LQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNS 398

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E  ERVF  +P  D+V  N +  G +       A   F  MR   + P   +   +  +
Sbjct: 399 MEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGT 458

Query: 515 CAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           C  L      G  +HA + + G ++D ++ ++LI MY  CGD+  +   F  ++ K+ ++
Sbjct: 459 CKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVIS 518

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH-----SGLVDVGVEI 628
           WN +I    ++G G+EA++L+ D   +G K D       L++ ++      G+   G+ +
Sbjct: 519 WNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSV 578

Query: 629 FNSMQLD-HGVEPILDHY------TCMIDCL------------------GRAGHFHEAEM 663
            N +  D H V   +D Y       CM+  L                   R G+F EAE 
Sbjct: 579 KNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAED 638

Query: 664 LIDEMPC---KDDPVIWEVLLSSC 684
               M     K D V +  LLS+C
Sbjct: 639 TFKHMVSVGQKPDYVTFVALLSAC 662



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 149/613 (24%), Positives = 256/613 (41%), Gaps = 86/613 (14%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           VAG  + AH++ +GL     + N LI ++        A+ LFD+M  +D  SWNA++S  
Sbjct: 162 VAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMY 221

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
              +                               +  K   V + M +    P   TL 
Sbjct: 222 SHEE-------------------------------VYSKCFIVLSDMRHGEVKPDVTTLC 250

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+     +   V  G   H L +  GL  ++ + NAL+++Y+  G    A  +F  MS  
Sbjct: 251 SLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRR 310

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
           + +++  M+S   +++  VEALE   +L+       +S++ SS LG C+           
Sbjct: 311 DVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSP--------- 361

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                     ++G+ +H + ++   +  L + NSLL MY+K   M+  E +F ++P   V
Sbjct: 362 -------EALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDV 414

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------- 348
           VS NV+  GY        A+ +   M+  G +P+ +T IN+   C               
Sbjct: 415 VSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHA 474

Query: 349 ---------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                   GD+++   +F  + + SV SWNA++++  +    +E
Sbjct: 475 YVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEE 534

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           AIKLF + Q  G K DR  LA  LSS A +  LE G Q+H  S+K     D++V +  + 
Sbjct: 535 AIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMD 594

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y KC + +   +           CWN++I+G +      EA   FK M      P   +
Sbjct: 595 MYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVT 654

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           F  +LS+C+      +G   +  +    G    I     ++++  + G    A +F D M
Sbjct: 655 FVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEM 714

Query: 567 HG-KNTVTWNEMI 578
               N + W  ++
Sbjct: 715 PVLPNDLIWRSLL 727



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 188/430 (43%), Gaps = 56/430 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A + G+ +HA IL+  L +   + N L+ +YSKCN+    + +F+ MP  D+ S N + 
Sbjct: 362 EALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLT 421

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                 +D+  A ++F         SW                      M   G  P +I
Sbjct: 422 GGYAALEDVANAMRVF---------SW----------------------MRGTGIKPNYI 450

Query: 122 TLASVFKASTALLDV-EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           T+ ++     +L D+  +G   H  V + GL  + Y+ N+L+++YA CG  + +  +F  
Sbjct: 451 TMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSR 510

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           ++  + +++ A+++   +  R  EA+++F         +D   L+  L            
Sbjct: 511 INNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECL------------ 558

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                S    +    G Q+H L++K G + D H+ N+ +DMY K G MD       +   
Sbjct: 559 ----SSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAH 614

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           R    WN +I+GY +     +A +  + M S G +PD VT + +L AC  +G I  G + 
Sbjct: 615 RPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDY 674

Query: 361 FDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
           ++SM      SP +     ++    +     EA K   EM    V P+      +LSS  
Sbjct: 675 YNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMP---VLPNDLIWRSLLSSSR 731

Query: 416 AMGILESGKQ 425
               L+ G++
Sbjct: 732 THKNLDIGRK 741



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 164/354 (46%), Gaps = 7/354 (1%)

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES- 422
           MP  + SSW   +S  ++      A  L R M+ R V      LA ++++C   G  E  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 423 --GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
             G  +HA + +     + Y+ + L+ +Y        A+R+F  +P+ ++V W +++  L
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           S N    EA + +++MR+  +     + ATV+S C  L     G QV A +   G +  +
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            V ++LI M+     +  A + FD M  ++ ++WN MI  Y+      +   +  DM   
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
            VKPD  T  ++++ C+ S LV +G  I +S+ +  G+   +     +++    AG   E
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGI-HSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD--PKNSAPYS 712
           AE L   M  + D + W  ++SS     +   A     +L + D  P NS  +S
Sbjct: 300 AESLFRNMS-RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFS 352


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 219/630 (34%), Positives = 331/630 (52%), Gaps = 88/630 (13%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           K+++  N +LS YAK G  + A  VFEEM EP+ V++TAM+ G  +  +   A+ MFR M
Sbjct: 77  KSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREM 136

Query: 213 IRKAVSIDSVSLSSVLGVCAREGC-GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           +   V     +L++VL  CA   C G+                 G++VH   +K G  + 
Sbjct: 137 VSDDVPPTQFTLTNVLASCAAVECLGI-----------------GRKVHSFVVKHGLSSY 179

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + ++NSLL+MYAK+GD  +A+++F  +  +S  SWN MI+ + Q                
Sbjct: 180 ISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQ---------------- 223

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                              SG +   +  F+ M    V SWNAM+S Y+Q    +EA+ +
Sbjct: 224 -------------------SGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDI 264

Query: 392 FREMQF-RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           F +M      KPD+ TLA  LS+CA +  L+ GKQ+HA  ++T       V + LI +YS
Sbjct: 265 FSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYS 324

Query: 451 KCQRNELAE---------------------------------RVFHRIPELDIVCWNSMI 477
           K    E+A+                                 R+F  +   D+V W +MI
Sbjct: 325 KSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMI 384

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            G   N  + +A   F+ M +    P  ++ AT+LS  + L+S   GRQ+HA   + G  
Sbjct: 385 VGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNA 444

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKD 596
           + + V +ALI MY K G I  AR  F+++H K +T+TW  MI   AQ+G G+EA+ L++ 
Sbjct: 445 SSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFER 504

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M+ +G+KPD IT+V +L+AC+H GLV+ G   +N MQ  H + P   HY CMID  GRAG
Sbjct: 505 MLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAG 564

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              EA   I+ MP + D + W  LL+SC++H NV LA+ AAE L  ++P+NS  YS LAN
Sbjct: 565 LLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALAN 624

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +YS+ G+W++   +R+ M +  + KD  +S
Sbjct: 625 VYSACGQWENAANIRKSMKDKGVKKDQGFS 654



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 162/566 (28%), Positives = 259/566 (45%), Gaps = 99/566 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +HA I++ GL    FL N L+  Y+K    + A  +FD+MP K ++SWN ILS   
Sbjct: 31  TGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYA 90

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   LE A+++F+EMPE + VSW  +I    + G  E A+ ++ +M ++   PT  TL +
Sbjct: 91  KGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTN 150

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------------- 169
           V  +  A+  +  GR+ H  V+K GL   I VAN+LL++YAK G                
Sbjct: 151 VLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKS 210

Query: 170 ---W----TKH--------AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              W    + H        A   FE+M E + V++ AM+SG  +     EAL++F  M+ 
Sbjct: 211 TSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLM 270

Query: 215 KAVS-IDSVSLSSVLGVCA-----REGCGV-------ESDVFAQSDNK----FSRNVHGQ 257
            + S  D  +L+S L  CA     + G  +       E D F    N     +S++  G 
Sbjct: 271 DSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKS-GGV 329

Query: 258 QVHCLTIKLGFEADLHLS--NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           ++    I+    ++L +    +LLD Y K GD++ A  IF +L  R VV+W  MI GY Q
Sbjct: 330 EIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQ 389

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINM------------------------------- 344
              +  A+EL + M   G +P+  T   M                               
Sbjct: 390 NGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSV 449

Query: 345 ----LVACVRSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
               +    +SG I   R +F+ +       +W +M+ + +Q    +EA+ LF  M   G
Sbjct: 450 SNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENG 509

Query: 400 VKPDRTTLAIILSSCAAMGILESGK------QVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           +KPD  T   +LS+C  +G++E G+      Q     + T SH      + +I ++ +  
Sbjct: 510 IKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHY-----ACMIDLFGRAG 564

Query: 454 RNELAERVFHRIP-ELDIVCWNSMIA 478
             + A      +P E D++ W S++A
Sbjct: 565 LLQEAHAFIENMPIEPDVIAWGSLLA 590



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 33/228 (14%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           + + L    K    F G+ +HA+I K G    +F+ + L+  Y K G IY A + FD M 
Sbjct: 16  YTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMP 75

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVR-------------------------------LYKD 596
            K+  +WN ++ GYA+ G  +EA R                               ++++
Sbjct: 76  VKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFRE 135

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M++  V P   T   +L +C+    + +G ++ +S  + HG+   +     +++   ++G
Sbjct: 136 MVSDDVPPTQFTLTNVLASCAAVECLGIGRKV-HSFVVKHGLSSYISVANSLLNMYAKSG 194

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
               A+++ D M  K     W  ++SS      V LA+   E++   D
Sbjct: 195 DPVTAKIVFDRMKLKSTSS-WNTMISSHMQSGLVDLAQVQFEQMIERD 241


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/647 (31%), Positives = 328/647 (50%), Gaps = 51/647 (7%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D+  G++ H  +++ G+  N+Y+ N LL LYA CG    A  +F++ S  + V++  M+S
Sbjct: 43  DLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMIS 102

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G A      EA  +F LM ++ +  D  +  S+L  C+         V            
Sbjct: 103 GYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPA------VLNW--------- 147

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+++H   ++ G   D  + N+L+ MYAK G +  A  +F  +  R  VSW  +   Y 
Sbjct: 148 -GREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYA 206

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------------------- 348
           +     ++++    M      P  +T +N+L AC                          
Sbjct: 207 ESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVR 266

Query: 349 ---------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                    ++ G  K  RE+F+ +    V +WN M+  +  S   +EA   F  M   G
Sbjct: 267 VSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEG 326

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V PDR T   +LS+CA  G L  GK++HA + K     D    + LI +YSK    + A 
Sbjct: 327 VAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDAR 386

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           +VF R+P+ D+V W +++   +     +E+F  FKQM Q  +   + ++  VL +C+   
Sbjct: 387 QVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPV 446

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +   G+++HA++ K G + D+ V +AL+ MY KCG +  A + F+ M  ++ VTWN +I 
Sbjct: 447 ALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIG 506

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G  QNG G EA++ Y+ M + G++P+  TFV +L+AC    LV+ G   F  M  D+G+ 
Sbjct: 507 GLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIV 566

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P   HY CM+D L RAGH  EAE +I  +P K    +W  LL++CR+H NV + +RAAE 
Sbjct: 567 PTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEH 626

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             +L+P+N+  Y  L+ IY++ G W D+  +R+ M E  + K+P  S
Sbjct: 627 CLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRS 673



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/563 (27%), Positives = 258/563 (45%), Gaps = 82/563 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H HILR G+  + ++ N L++LY+ C + + A+                       
Sbjct: 47  GKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEAR----------------------- 83

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   +LFD+   ++VVSWN +IS     GL ++A +++  M  E   P   T  S+
Sbjct: 84  --------QLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSI 135

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++   +  GR  H  V++ GL  +  V NAL+S+YAKCG  + A  VF+ M+  +E
Sbjct: 136 LSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDE 195

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T +    A++    E+L+ +  M+++ V    ++  +VL  C               
Sbjct: 196 VSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACG-------------- 241

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+Q+H   ++  + +D+ +S +L  MY K G    A  +F  L  R V++W
Sbjct: 242 --SLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAW 299

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR---------------- 350
           N MI G+    Q  +A     RM   G  PD  T   +L AC R                
Sbjct: 300 NTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAK 359

Query: 351 -------------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                              +G +K  R++FD MP   V SW  +L  Y+  +   E+   
Sbjct: 360 DGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTT 419

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F++M  +GVK ++ T   +L +C+    L+ GK++HA  +K     D  V + L+ +Y K
Sbjct: 420 FKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFK 479

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E A RVF  +   D+V WN++I GL  N   +EA   ++ M+   M P   +F  V
Sbjct: 480 CGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNV 539

Query: 512 LSSCAKLSSSFQGRQVHAQIEKD 534
           LS+C   +   +GR+  A + KD
Sbjct: 540 LSACRVCNLVEEGRRQFAFMSKD 562



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 198/431 (45%), Gaps = 55/431 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HAHI+ +    D  +   L ++Y KC     A+ +F+ + ++D             
Sbjct: 249 GKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRD------------- 295

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             V++WN +I   V +G  E+A   +++M  EG  P   T  +V
Sbjct: 296 ------------------VIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTV 337

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      +  G+  H    K GL  ++   NAL+++Y+K G  K A  VF+ M + + 
Sbjct: 338 LSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDV 397

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T ++   A  D+VVE+   F+ M+++ V  + ++   VL  C        S+  A  
Sbjct: 398 VSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKAC--------SNPVALK 449

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+++H   +K G  ADL ++N+L+ MY K G ++ A  +F  +  R VV+W
Sbjct: 450 --------WGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTW 501

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N +I G GQ  +  +A++  + MKS G  P+  T +N+L AC     ++ GR  F  M  
Sbjct: 502 NTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSK 561

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P+   +  M+   +++ + +EA  +   +    +KP       +L++C     +E
Sbjct: 562 DYGIVPTEKHYACMVDILARAGHLREAEDVILTIP---LKPSAAMWGALLAACRIHCNVE 618

Query: 422 SGKQVHAASLK 432
            G++     LK
Sbjct: 619 IGERAAEHCLK 629



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 132/238 (55%)

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           + + +  +G + D      +L SC     L  GKQVH   L+     + Y+ + L+ +Y+
Sbjct: 15  VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA 74

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
            C     A ++F +     +V WN MI+G +   L  EAF  F  M+Q  + P +F+F +
Sbjct: 75  HCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVS 134

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +LS+C+  +    GR++H ++ + G  ND  VG+ALI MY KCG +  AR+ FD M  ++
Sbjct: 135 ILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRD 194

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            V+W  +   YA++GYG+E+++ Y  M+   V+P  IT++ +L+AC     ++ G +I
Sbjct: 195 EVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQI 252


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 234/730 (32%), Positives = 375/730 (51%), Gaps = 73/730 (10%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE----GFVPTHITLAS 125
           +++A + FD +  RN+VS N++IS   + G    A  +++ M  E    G  P   T  S
Sbjct: 228 VDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGS 287

Query: 126 VFKASTALLDVEHGRRCHGLVI---------KIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           +  A+ +L +        GLV+         K G   ++YV +AL+S +AK G   +A  
Sbjct: 288 LISATCSLAN-------SGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKN 340

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F++MS  N V+   ++ GL +  R  EA+E+F + ++ +V ++  S   +L        
Sbjct: 341 IFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELF-MEMKDSVELNPNSYMIILTAFP---- 395

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIF 295
             E  V      K      G +VH   I+ G   A + + N L++MYAK G ++ A V+F
Sbjct: 396 --EFHVLENGKRK------GSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVF 447

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
             +  +  V+WN MI G  Q  Q  +A++  Q M+     P   T I+ L +C   G I 
Sbjct: 448 RLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWIS 507

Query: 356 TGREM-----------------------------------FDSMPSPSVSSWNAMLSSYS 380
            G ++                                   F  M      SWN+++ + +
Sbjct: 508 VGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALA 567

Query: 381 QSE-NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
            SE +  EA++ F  M   G  P+R T   IL++ +++ + E GKQ+HA  LK     D 
Sbjct: 568 DSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADT 627

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
            + + L+  Y KC      E +F R+ +  D V WNSMI+G   N L  +A      M Q
Sbjct: 628 AIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQ 687

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
                  F+FATVLS+CA +++  +G +VH    +    +DI +GSAL++MY KCG I  
Sbjct: 688 KGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDY 747

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A +FF+MM  +N  +WN MI GYA++G+G +++ L+  M   G  PD +TFV +L+ACSH
Sbjct: 748 ASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSH 807

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
           +GLV+ G   F+SM   +G+ P ++H++CM+D LGR G  ++ E  +++MP K + +IW 
Sbjct: 808 AGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWR 867

Query: 679 VLLSS-CRLHA-NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
            +L + CR +  N  L +RAAE L  ++P N+  Y LL+N+Y+S G+WDD+   R  M +
Sbjct: 868 TVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRK 927

Query: 737 NCIVKDPAYS 746
             + K+   S
Sbjct: 928 AFVKKEAGCS 937



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 183/727 (25%), Positives = 324/727 (44%), Gaps = 93/727 (12%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH  + +NG  +D FLCN LI +Y++  +  S + +FD+MP +++ SW+           
Sbjct: 95  LHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSC---------- 144

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                                LIS   RN +  +A  ++ KM ++GF+P H    SV +A
Sbjct: 145 ---------------------LISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRA 183

Query: 130 --STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC-GWTKHAVPVFEEMSEPNE 186
                   ++ G + HGL+ K     ++  +N L+S+Y    G   +A   F+ +   N 
Sbjct: 184 CQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNL 243

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+  +M+S   +    V A ++F  M ++ +           G      C + +      
Sbjct: 244 VSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLL 303

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           +   +R            K GF  DL++ ++L+  +AK G +  A+ IF  +  R+VVS 
Sbjct: 304 EQLLTR----------VEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSL 353

Query: 307 NVMIAGYGQKYQSTKAIELLQRMK-SCGFEPD-----------------------EVTS- 341
           N +I G  ++ +  +A+EL   MK S    P+                       EV + 
Sbjct: 354 NGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAF 413

Query: 342 -----------------INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                            INM   C   G I     +F  M +    +WN+M++   Q++ 
Sbjct: 414 LIRSGLLNAQIAIGNGLINMYAKC---GAINDACVVFRLMDNKDSVTWNSMITGLDQNKQ 470

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
             EA+K F+EM+   + P   T+   LSSCA++G +  G+Q+H   LK    +D  V++ 
Sbjct: 471 FLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNA 530

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD-IEAFMFFKQMRQNEMYP 503
           L+ +Y +C   +  ++ F  + + D V WNS+I  L+ +    +EA   F  M +    P
Sbjct: 531 LLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDP 590

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI-YGARQF 562
            + +F T+L++ + LS    G+Q+HA + K     D  + +AL+  Y KCGD+ Y    F
Sbjct: 591 NRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIF 650

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
             M   ++ V+WN MI GY  N    +A+ +   M+  G + D  TF  +L+AC+    +
Sbjct: 651 SRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATL 710

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           + G+E+ +   +   +E  +   + ++D   + G    A    + MP + +   W  ++S
Sbjct: 711 ERGMEV-HGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPAR-NLYSWNSMIS 768

Query: 683 SCRLHAN 689
               H +
Sbjct: 769 GYARHGH 775



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 229/479 (47%), Gaps = 58/479 (12%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +++H    K GF  DL L N+L+++YA+ GD+ S   +F  +P R++VSW+ +I+GY + 
Sbjct: 93  EELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRN 152

Query: 317 YQSTKAIELLQRMKSCGFEP------------------------------------DEVT 340
               +A EL ++M S GF P                                    ++VT
Sbjct: 153 RMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVT 212

Query: 341 SINMLVACVRS--GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           + N+L++   +  G +   R  FDS+   ++ S N+M+S Y Q  +   A  +F  MQ  
Sbjct: 213 ASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKE 272

Query: 399 ----GVKPDRTTLAIILSSCAAMGILESG----KQVHAASLKTASHIDNYVASGLIGIYS 450
               G+KP+  T   ++S+  ++    SG    +Q+     K+    D YV S L+  ++
Sbjct: 273 VMGDGLKPNEYTFGSLISATCSLA--NSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFA 330

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN-EMYPTQFSFA 509
           K      A+ +F ++   ++V  N +I GL       EA   F +M+ + E+ P   S+ 
Sbjct: 331 KAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPN--SYM 388

Query: 510 TVLSSCAKL----SSSFQGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFD 564
            +L++  +     +   +G +VHA + + G +N  I +G+ LI MY KCG I  A   F 
Sbjct: 389 IILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFR 448

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
           +M  K++VTWN MI G  QN    EAV+ +++M  + + P + T ++ L++C+  G + V
Sbjct: 449 LMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISV 508

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           G E  +   L  G++  +     ++   G  G+  E +     M    D V W  L+ +
Sbjct: 509 G-EQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLM-LDYDHVSWNSLIGA 565



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 193/414 (46%), Gaps = 55/414 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH   L+ GL  D  + N L+ LY +C      Q  F  M   D  SWN+++ A   
Sbjct: 509 GEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGA--- 565

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    L D  P           S L       +A+  +  M   G+ P  +T  ++
Sbjct: 566 ---------LADSEP-----------SML-------EAVESFLVMMRAGWDPNRVTFITI 598

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
             A ++L   E G++ H LV+K  +  +  + NALL+ Y KCG   +   +F  MS+  +
Sbjct: 599 LAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQD 658

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           EV++ +M+SG    + + +A++M   M++K   +D  + ++VL  CA             
Sbjct: 659 EVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACA------------- 705

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +    G +VH  +++   E+D+ + ++L+DMYAK G +D A   F  +P R++ S
Sbjct: 706 ---TVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYS 762

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI+GY +    TK+++L  +MK  G  PD VT + +L AC  +G +  G   FDSM 
Sbjct: 763 WNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMS 822

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                +P +  ++ M+    +     +      +M    VKP+      +L +C
Sbjct: 823 EIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMP---VKPNVLIWRTVLGAC 873



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 163/319 (51%), Gaps = 14/319 (4%)

Query: 310 IAGYGQKYQ----STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           I    Q+Y+    S  A EL  ++   GF  D      ++    R GD+ +GR++FD MP
Sbjct: 76  IESLAQRYRYSCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMP 135

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI--LESG 423
             ++ SW+ ++S Y+++    EA +LFR+M   G  P+      ++ +C   G   L+ G
Sbjct: 136 LRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFG 195

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKC-QRNELAERVFHRIPELDIVCWNSMIAGLSL 482
            Q+H    KT    D   ++ LI +Y       + A R F  I   ++V  NSMI+    
Sbjct: 196 MQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQ 255

Query: 483 NSLDIEAFMFFKQMRQNEM----YPTQFSFATVLSSCAKLSSS--FQGRQVHAQIEKDGY 536
               + AF  F  M++  M     P +++F +++S+   L++S      Q+  ++EK G+
Sbjct: 256 RGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGF 315

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
           ++D++VGSAL+  + K G I  A+  F  M  +N V+ N +I G  +   G+EAV L+ +
Sbjct: 316 LHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFME 375

Query: 597 MIASGVKPDDITFVAILTA 615
           M  S V+ +  +++ ILTA
Sbjct: 376 MKDS-VELNPNSYMIILTA 393



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 141/309 (45%), Gaps = 46/309 (14%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H  GK +HA +L+  +  DT + N L+  Y KC +    +++F +M  +           
Sbjct: 608 HELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQ---------- 657

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                         DE      VSWN++IS  + N L  KA+ +   M  +G      T 
Sbjct: 658 --------------DE------VSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTF 697

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A+V  A   +  +E G   HG  ++  L+ +I + +AL+ +YAKCG   +A   FE M  
Sbjct: 698 ATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPA 757

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N  ++ +M+SG A+     ++L++F  M  +    D V+   VL  C+    G+ ++ F
Sbjct: 758 RNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSH--AGLVNEGF 815

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER-S 302
           +  D+         +++ L  ++      H S  ++D+  + G+++  E   + +P + +
Sbjct: 816 SHFDSM-------SEIYGLAPRME-----HFS-CMVDLLGRVGELNKMEDFLNQMPVKPN 862

Query: 303 VVSWNVMIA 311
           V+ W  ++ 
Sbjct: 863 VLIWRTVLG 871


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/590 (33%), Positives = 318/590 (53%), Gaps = 52/590 (8%)

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           +S L KT R+ EAL +   MI +   + S     +L  CAR                   
Sbjct: 19  VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECAR----------------LRS 62

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G++VH   +K G + + +L N+LL MYAK G +  A  +F ++ +R++VSW  MI  
Sbjct: 63  LEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEA 122

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------------- 349
           +    ++ +A +  + MK  G +PD+VT +++L A                         
Sbjct: 123 FVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELE 182

Query: 350 ------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                       + GDI   R +FD +P  +V +W  +++ Y+Q      A++L   MQ 
Sbjct: 183 PRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQ 242

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
             V P++ T A IL  C     LE GK+VH   +++    + +V + LI +Y KC   E 
Sbjct: 243 AEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEE 302

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A ++F  +P  D+V W +M+ G +      EA   F++M+Q  + P + +F +VL+SC+ 
Sbjct: 303 ARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSS 362

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
            +   +G+++H Q+   GY  D+++ SAL+ MY KCG +  A   F+ M  +N V W  +
Sbjct: 363 PAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAI 422

Query: 578 IHGY-AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDH 636
           I G  AQ+G   EA+  +  M   G+KPD +TF ++L+AC+H GLV+ G + F SM LD+
Sbjct: 423 ITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDY 482

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA 696
           G++P+++HY+C +D LGRAGH  EAE +I  MP    P +W  LLS+CR+H++V   +RA
Sbjct: 483 GIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERA 542

Query: 697 AEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           AE + +LDP +   Y  L++IY++ GR++D   VR++M +  +VK+P  S
Sbjct: 543 AENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQS 592



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 238/474 (50%), Gaps = 58/474 (12%)

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           +S L + G  ++AL + N M  +G          + +    L  +E GR  H  ++K G+
Sbjct: 19  VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
             N Y+ N LLS+YAKCG    A  VF+ + + N V++TAM+      ++ +EA + +  
Sbjct: 79  QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN---VHGQQVHCLTIKLGF 268
           M       D V+  S+L                   N F+       GQ+VH   ++ G 
Sbjct: 139 MKLAGCKPDKVTFVSLL-------------------NAFTNPELLQLGQKVHMEIVEAGL 179

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           E +  +  SL+ MYAK GD+  A VIF  LPE++VV+W ++IAGY Q+ Q   A+ELL+ 
Sbjct: 180 ELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLET 239

Query: 329 MKSCGFEPDEVTSINMLVACV-----------------------------------RSGD 353
           M+     P+++T  ++L  C                                    + G 
Sbjct: 240 MQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGG 299

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           ++  R++F  +P   V +W AM++ Y+Q   H EAI LFR MQ +G+KPD+ T   +L+S
Sbjct: 300 LEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTS 359

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           C++   L+ GK++H   +    ++D Y+ S L+ +Y+KC   + A  VF+++ E ++V W
Sbjct: 360 CSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAW 419

Query: 474 NSMIAG-LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
            ++I G  + +    EA  +F QM++  + P + +F +VLS+C  +    +GR+
Sbjct: 420 TAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 473



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 220/425 (51%), Gaps = 11/425 (2%)

Query: 267 GFEADLHLSNSL-LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
           GF     L+NS  + +  K G +  A  I + +  +    ++ +  G  Q+    +++E 
Sbjct: 6   GFRKVETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQ 65

Query: 326 LQRMKSC----GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
            + + +     G +P+      +L    + G +   R +FDS+   ++ SW AM+ ++  
Sbjct: 66  GREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVA 125

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
              + EA K +  M+  G KPD+ T   +L++     +L+ G++VH   ++    ++  V
Sbjct: 126 GNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRV 185

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + L+G+Y+KC     A  +F R+PE ++V W  +IAG +       A    + M+Q E+
Sbjct: 186 GTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEV 245

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P + +FA++L  C   ++   G++VH  I + GY  +++V ++LI MYCKCG +  AR+
Sbjct: 246 APNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARK 305

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F  +  ++ VTW  M+ GYAQ G+ DEA+ L++ M   G+KPD +TF ++LT+CS    
Sbjct: 306 LFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAF 365

Query: 622 VDVGVEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           +  G  I    QL H     LD Y  + ++    + G   +A ++ ++M  + + V W  
Sbjct: 366 LQEGKRIHQ--QLVHAGYN-LDVYLQSALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTA 421

Query: 680 LLSSC 684
           +++ C
Sbjct: 422 IITGC 426



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 218/421 (51%), Gaps = 28/421 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            +++    K  D+  A  +FD +PE+NVV+W  LI+   + G  + AL +   M      
Sbjct: 187 TSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVA 246

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  IT AS+ +  T    +EHG++ H  +I+ G  + ++V N+L+++Y KCG  + A  +
Sbjct: 247 PNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKL 306

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F ++   + VT+TAM++G A+     EA+ +FR M ++ +  D ++ +SVL  C+     
Sbjct: 307 FSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCS----- 361

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
             S  F Q      + +H Q VH      G+  D++L ++L+ MYAK G MD A ++F+ 
Sbjct: 362 --SPAFLQE----GKRIHQQLVHA-----GYNLDVYLQSALVSMYAKCGSMDDASLVFNQ 410

Query: 298 LPERSVVSWNVMIAG-YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
           + ER+VV+W  +I G   Q  +  +A+E   +MK  G +PD+VT  ++L AC   G ++ 
Sbjct: 411 MSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEE 470

Query: 357 GREMFDSM-----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           GR+ F SM       P V  ++  +    ++ + +EA  +   M F    P  +    +L
Sbjct: 471 GRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPF---IPGPSVWGALL 527

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDN-YVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           S+C     +E G++     LK     D  YVA  L  IY+   R E AE+V   + + D+
Sbjct: 528 SACRVHSDVERGERAAENVLKLDPDDDGAYVA--LSSIYAAAGRYEDAEKVRQVMEKRDV 585

Query: 471 V 471
           V
Sbjct: 586 V 586



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 249/521 (47%), Gaps = 88/521 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA IL++G+  + +L N L+ +Y+KC +                            
Sbjct: 66  GREVHAAILKSGIQPNRYLENTLLSMYAKCGS---------------------------- 97

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L  A ++FD + +RN+VSW  +I A V      +A   Y  M   G  P  +T  S+
Sbjct: 98  ---LTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSL 154

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A T    ++ G++ H  +++ GL+    V  +L+ +YAKCG    A  +F+ + E N 
Sbjct: 155 LNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNV 214

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+T +++G A+  +V  ALE+   M +  V+ + ++ +S+L     +GC   + +    
Sbjct: 215 VTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASIL-----QGCTTPAAL---- 265

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   HG++VH   I+ G+  +L + NSL+ MY K G ++ A  +FS+LP R VV+W
Sbjct: 266 -------EHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTW 318

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
             M+ GY Q     +AI L +RM+  G +PD++T  ++L +C     ++ G+ +      
Sbjct: 319 TAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVH 378

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSS-YSQSENHKEAIK 390
                                        F+ M   +V +W A+++   +Q    +EA++
Sbjct: 379 AGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALE 438

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGI 448
            F +M+ +G+KPD+ T   +LS+C  +G++E G++ H  S+     I   V   S  + +
Sbjct: 439 YFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDL 497

Query: 449 YSKCQRNELAERVFHRIPELD-IVCWNSMIAGLSLNSLDIE 488
             +    E AE V   +P +     W ++++   ++S D+E
Sbjct: 498 LGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHS-DVE 537


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 231/729 (31%), Positives = 373/729 (51%), Gaps = 59/729 (8%)

Query: 59  AILSAQCKSDDLEFAYKLFDEMP--ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
           A+L +     D+  A+ +    P   R+   WN+L  AL    L  +AL VYN+M   G 
Sbjct: 52  ALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRALASAALPCEALRVYNRMVRSGV 111

Query: 117 VPTHITLASVFKASTALLDVEH---GRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTK 172
            P   T      A+ A+   EH   G   H   ++ G L  +++  N L++ YA CG   
Sbjct: 112 RPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAA 171

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF+EM   + V++ +++S L     + +A      M+R  V ++  SL S+L  C 
Sbjct: 172 DARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACG 231

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
            E            D  F   VHG     L +K G  + ++L N+L+DMY K GD++S+ 
Sbjct: 232 TE-----------RDEGFGLCVHG-----LVLKFGLNSVVNLGNALVDMYGKFGDLESSM 275

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F+ + E++ VSWN  I  +         +E+ + M      P  VT  ++L A V  G
Sbjct: 276 HVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLG 335

Query: 353 DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
               G+E+                                   F+++   +V SWNAM++
Sbjct: 336 YFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIA 395

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
           + +Q+    EA +L  EMQ  G  P+  TL  +L +C+ +  ++ GKQ+HA S++ +   
Sbjct: 396 NLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMS 455

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D +V++ LI +Y+KC +  LA  +F R  E D V +N++I G S +    E+   F+QMR
Sbjct: 456 DLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCFESLHLFQQMR 514

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
              +     SF   LS+C+ LS+  QG+++H  + K    +  F+ ++L+++Y K G + 
Sbjct: 515 LAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLD 574

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A + F+ +  K+  +WN MI GY  +G  D A  L+  M   G++ D ++++A+L+ CS
Sbjct: 575 TASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCS 634

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           H GLVD G + F+ M +   ++P   HY CM+D LGRAG   E+  +I  MP + +  +W
Sbjct: 635 HGGLVDRGKKYFSQM-IAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVW 693

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
             LL SCR+H ++ LA+ AAE LF L P+NS  Y+LL N+YS  G W++   V++LM   
Sbjct: 694 GALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEANGVKKLMKSR 753

Query: 738 CIVKDPAYS 746
            + K+PAYS
Sbjct: 754 KVQKNPAYS 762



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 167/563 (29%), Positives = 266/563 (47%), Gaps = 88/563 (15%)

Query: 7   GKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G  LHA  LR GL   D F  N L+  Y+ C     A+                      
Sbjct: 137 GAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADAR---------------------- 174

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI-TLA 124
                    ++FDEMP R+VVSWN+L+SAL+ NG+ E A      M   G VP ++ +L 
Sbjct: 175 ---------RVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSG-VPVNVASLV 224

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  A     D   G   HGLV+K GL+  + + NAL+ +Y K G  + ++ VF  M E 
Sbjct: 225 SILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEK 284

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           NEV++ + +   A      + LEMFRLM    V+  SV+LSS+L      G         
Sbjct: 285 NEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLG--------- 335

Query: 245 QSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                     H G+++H  +I+   E+D+ ++N+L+DMYAK G  + A  IF N+  R+V
Sbjct: 336 --------YFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNV 387

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---- 359
           VSWN MIA   Q     +A  L+  M+  G  P+  T +N+L AC R   +K G++    
Sbjct: 388 VSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAW 447

Query: 360 -------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                          +FD      V S+N ++  YSQS+   E+
Sbjct: 448 SIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEKDGV-SYNTLIVGYSQSQCCFES 506

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           + LF++M+  G++ D  +    LS+C+ +   + GK++H   +K       ++A+ L+ +
Sbjct: 507 LHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDV 566

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+K    + A ++F+RI + D+  WN+MI G  ++     AF  F  M+ + +     S+
Sbjct: 567 YTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSY 626

Query: 509 ATVLSSCAKLSSSFQGRQVHAQI 531
             VLS C+      +G++  +Q+
Sbjct: 627 IAVLSVCSHGGLVDRGKKYFSQM 649



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 4/122 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  +++  L    FL N L+++Y+K     +A  +F+++  KD+ SWN ++     
Sbjct: 541 GKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGM 600

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              ++ A++LFD M +  +    VS+  ++S     GL ++    +++M  +   P  + 
Sbjct: 601 HGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMH 660

Query: 123 LA 124
            A
Sbjct: 661 YA 662


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 217/730 (29%), Positives = 375/730 (51%), Gaps = 77/730 (10%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y   AIL        +  + K+F+EMP+RNVVSW +L+      G  E+ + +Y    
Sbjct: 208 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK--- 264

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
                                 D   GR+  G V+K GL+  + V N+L+S+    G   
Sbjct: 265 ----------------------DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVD 302

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +A  +F++MSE + +++ ++ +  A+   + E+  +F LM R    ++S ++S++L V  
Sbjct: 303 YANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 362

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                           K+ R +HG     L +K+GF++ + + N+LL MYA  G    A 
Sbjct: 363 H-----------VDHQKWGRGIHG-----LVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 406

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--- 349
           ++F  +P + ++SWN ++A +    +S  A+ LL  M S G   + VT  + L AC    
Sbjct: 407 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 466

Query: 350 --------------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                                           + G++   R +   MP   V +WNA++ 
Sbjct: 467 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 526

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG-ILESGKQVHAASLKTASH 436
            Y++ E+  +A+  F+ M+  GV  +  T+  +LS+C   G +LE GK +HA  +     
Sbjct: 527 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 586

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D +V + LI +Y+KC     ++ +F+ +   +I+ WN+M+A  + +    E      +M
Sbjct: 587 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 646

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R   +   QFSF+  LS+ AKL+   +G+Q+H    K G+ +D F+ +A  +MY KCG+I
Sbjct: 647 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 706

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
               +       ++  +WN +I    ++GY +E    + +M+  G+KP  +TFV++LTAC
Sbjct: 707 GEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 766

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH GLVD G+  ++ +  D G+EP ++H  C+ID LGR+G   EAE  I +MP K + ++
Sbjct: 767 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 826

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W  LL+SC++H N+   ++AAE L +L+P++ + Y L +N++++ GRW+D+  VR+ M  
Sbjct: 827 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGF 886

Query: 737 NCIVKDPAYS 746
             I K  A S
Sbjct: 887 KNIKKKQACS 896



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 154/643 (23%), Positives = 290/643 (45%), Gaps = 97/643 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +   ++++GL     + N LI +     N   A ++FD+M  +D  SWN+I +A  +
Sbjct: 269 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 328

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +  +E ++++F                            S+  +  +E    T  TL SV
Sbjct: 329 NGHIEESFRIF----------------------------SLMRRFHDEVNSTTVSTLLSV 360

Query: 127 FKASTALLDVEH---GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
                 L  V+H   GR  HGLV+K+G D  + V N LL +YA  G +  A  VF++M  
Sbjct: 361 ------LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 414

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + +++ ++M+      R ++AL +   MI    S++ V+ +S L  C         D F
Sbjct: 415 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC------FTPDFF 468

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
            +          G+ +H L +  G   +  + N+L+ MY K G+M  +  +   +P R V
Sbjct: 469 EK----------GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 518

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMK--------------------------------- 330
           V+WN +I GY +     KA+   Q M+                                 
Sbjct: 519 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 578

Query: 331 ---SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
              S GFE DE    +++    + GD+ + +++F+ + + ++ +WNAML++ +   + +E
Sbjct: 579 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 638

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
            +KL  +M+  GV  D+ + +  LS+ A + +LE G+Q+H  ++K     D+++ +    
Sbjct: 639 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAAD 698

Query: 448 IYSKCQRNELAERVFHRIPELD--IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           +YSKC   E+ E V    P ++  +  WN +I+ L  +    E    F +M +  + P  
Sbjct: 699 MYSKC--GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 756

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            +F ++L++C+      +G   +  I +D G    I     +I++  + G +  A  F  
Sbjct: 757 VTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFIS 816

Query: 565 MMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
            M  K N + W  ++     +G  D   +  +++  S ++P+D
Sbjct: 817 KMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL--SKLEPED 857



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 239/488 (48%), Gaps = 25/488 (5%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           GR  H L +K  +  ++   N L+++Y K G  K A  +F+ M   NEV++  MMSG+ +
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
               +E +E FR M    +   S  ++S++  C R G      +F +          G Q
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG-----SMFRE----------GVQ 195

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           VH    K G  +D+++S ++L +Y   G +  +  +F  +P+R+VVSW  ++ GY  K +
Sbjct: 196 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 255

Query: 319 STKAI----------ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPS 368
             + I          +++ ++   G E       +++      G++     +FD M    
Sbjct: 256 PEEVIDIYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 315

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
             SWN++ ++Y+Q+ + +E+ ++F  M+    + + TT++ +LS    +   + G+ +H 
Sbjct: 316 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 375

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
             +K        V + L+ +Y+   R+  A  VF ++P  D++ WNS++A    +   ++
Sbjct: 376 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 435

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIE 548
           A      M  +       +F + L++C       +GR +H  +   G   +  +G+AL+ 
Sbjct: 436 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 495

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           MY K G++  +R+    M  ++ V WN +I GYA++   D+A+  ++ M   GV  + IT
Sbjct: 496 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 555

Query: 609 FVAILTAC 616
            V++L+AC
Sbjct: 556 VVSVLSAC 563



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 144/301 (47%), Gaps = 29/301 (9%)

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
           I  +G+ VHA  +K    +     + LI +Y+K  R + A  +F  +P  + V WN+M++
Sbjct: 87  IETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMS 146

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYV 537
           G+    L +E   FF++M    + P+ F  A+++++C +  S F +G QVH  + K G +
Sbjct: 147 GIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLL 206

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           +D++V +A++ +Y   G +  +R+ F+ M  +N V+W  ++ GY+  G  +E + +YKD 
Sbjct: 207 SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDE 266

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
                                     +G +I   + +  G+E  L     +I  LG  G+
Sbjct: 267 -------------------------SLGRQIIGQV-VKSGLESKLAVENSLISMLGSMGN 300

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL-DPKNSAPYSLLAN 716
              A  + D+M  + D + W  + ++   + ++  + R    + R  D  NS   S L +
Sbjct: 301 VDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 359

Query: 717 I 717
           +
Sbjct: 360 V 360



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/404 (21%), Positives = 173/404 (42%), Gaps = 65/404 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA+I+  G   D  + N LI +Y+KC +  S+Q LF+ + +++I +WNA+L+A   
Sbjct: 573 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA- 631

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                          +G  E+ L + +KM + G      + +  
Sbjct: 632 ------------------------------HHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 661

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A+  L  +E G++ HGL +K+G + + ++ NA   +Y+KCG     V +       + 
Sbjct: 662 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 721

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++  ++S L +     E    F  M+   +    V+  S+L  C+  G     D     
Sbjct: 722 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGL---VDKGLAY 778

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER-SVVS 305
            +  +R+             G E  +     ++D+  ++G +  AE   S +P + + + 
Sbjct: 779 YDMIARD------------FGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 826

Query: 306 WNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDE----VTSINMLVACVRSGDIKTGR 358
           W  ++A    +G   +  KA E L ++     EP++    V S NM     R  D++  R
Sbjct: 827 WRSLLASCKIHGNLDRGRKAAENLSKL-----EPEDDSVYVLSSNMFATTGRWEDVENVR 881

Query: 359 EM--FDSMPSPSVSSWNAM---LSSYSQSE-NHKEAIKLFREMQ 396
           +   F ++      SW  +   +SS+   +  H + ++++ +++
Sbjct: 882 KQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 925



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 6/201 (2%)

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFS-FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
           ++ +++  MF K  R+   +  + S F  +    ++++    GR VHA   K      + 
Sbjct: 51  DATNLDIAMFEKSGRKKNHWNPEISCFDQI--GFSQITIETTGRAVHALCVKGLVRLSVL 108

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
             + LI MY K G +  AR  FD+M  +N V+WN M+ G  + G   E +  ++ M   G
Sbjct: 109 HTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG 168

Query: 602 VKPDDITFVAILTACSHSG-LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           +KP      +++TAC  SG +   GV++ +      G+   +   T ++   G  G    
Sbjct: 169 IKPSSFVIASLVTACGRSGSMFREGVQV-HGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 227

Query: 661 AEMLIDEMPCKDDPVIWEVLL 681
           +  + +EMP + + V W  L+
Sbjct: 228 SRKVFEEMPDR-NVVSWTSLM 247


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 222/680 (32%), Positives = 354/680 (52%), Gaps = 77/680 (11%)

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           +V  WN LI   +       AL ++ +M    + P H T   VFKA   + + E G   H
Sbjct: 90  SVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIH 149

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP---NEVTFTAMMSGLAKTD 200
           G VI++G + N++V NA++S+Y KC    HA  VF+E+      + VT+ +++S  +   
Sbjct: 150 GCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCF 209

Query: 201 RVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
               A+ +FR M +   +  D+V + ++L VC   G G+                 G+QV
Sbjct: 210 VPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGL----------------CGRQV 253

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H   ++ G   D+ + N+L+DMYAK G M+ A  +F  +  + VV+WN M+ GY Q  + 
Sbjct: 254 HGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRF 313

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
             A+ L  +M+    E D VT                               W++++S Y
Sbjct: 314 EDALSLFGKMREEKIESDVVT-------------------------------WSSVISGY 342

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK---TASH 436
           +Q     EA+ +FR+M     +P+  TL  +LS+CA++G L  GK+ H  S+K      H
Sbjct: 343 AQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEH 402

Query: 437 IDNY----VASGLIGIYSKCQRNELAERVFHRI--PELDIVCWNSMIAGLSLNSLDIEAF 490
            D+     V + LI +Y+KC+  E+A  +F  I   + D+V W  MI G + +     A 
Sbjct: 403 NDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHAL 462

Query: 491 MFFKQMRQ--NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND--IFVGSAL 546
             F +M +  N + P  F+ + VL +CA+L++   G+Q+HA + +   ++   +FV + L
Sbjct: 463 QLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCL 522

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           I+MY K GD+  A+  FD M  +N V+W  ++ GY  +G  ++A R++ +M    +  D 
Sbjct: 523 IDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDG 582

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           ITF+ +L ACSHSG+             D GV+P ++HY CM+D LGRAG   EA  LI+
Sbjct: 583 ITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLIN 629

Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDD 726
           +MP +  PV+W  LLS+CR+H+N  LA+ AA++L  L   N   Y+LL+NIY++  RW D
Sbjct: 630 DMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKD 689

Query: 727 LRAVRELMSENCIVKDPAYS 746
           +  +  LM    I K P +S
Sbjct: 690 VARIGYLMKRTGIKKIPGWS 709



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 217/427 (50%), Gaps = 44/427 (10%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G+ +H   +R+GL +D F+ N L+++Y+KC     A  +F++M  KD+ +WNA+++  
Sbjct: 248 LCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGY 307

Query: 65  CKSDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
            ++   E A  LF +M E     +VV+W+++IS   + G   +A+ V+ +M      P  
Sbjct: 308 SQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNV 367

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLD-------KNIYVANALLSLYAKCGWTKH 173
           +TL S+  A  ++  + HG+  H   +K  L         ++ V NAL+ +YAKC   + 
Sbjct: 368 VTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEV 427

Query: 174 AVPVFEEMSEPNE--VTFTAMMSGLAKTDRVVEALEMFRLM--IRKAVSIDSVSLSSVLG 229
           A  +F+E+   +   VT+T M+ G A+      AL++F  M  I   +  +  ++S VL 
Sbjct: 428 ARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLM 487

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEAD-LHLSNSLLDMYAKNGD 287
            CAR            +  KF     G+Q+H   ++    ++D L ++N L+DMY+K+GD
Sbjct: 488 ACAR-----------LAALKF-----GKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGD 531

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           +D+A+V+F ++ +R+ VSW  ++ GYG   +S  A  +   M+      D +T + +L A
Sbjct: 532 VDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYA 591

Query: 348 CVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
           C  SG         D    P V  +  M+    ++    EA++L  +M    ++P     
Sbjct: 592 CSHSG--------MDFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMP---IEPTPVVW 640

Query: 408 AIILSSC 414
             +LS+C
Sbjct: 641 IALLSAC 647



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 222/485 (45%), Gaps = 104/485 (21%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  ++R G   + F+CN +I +Y KC                      A++ A+  
Sbjct: 145 GASIHGCVIRLGFESNVFVCNAVISMYGKCK---------------------AVVHAR-- 181

Query: 67  SDDLEFAYKLFDEMPERNV---VSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHIT 122
                   K+FDE+  R +   V+WN+++S      +   A+S++ +M+   G +P  + 
Sbjct: 182 --------KVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVG 233

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + ++      L     GR+ HG  ++ GL ++++V NAL+ +YAKCG  + A  VFE M 
Sbjct: 234 VVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMR 293

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-D 241
             + VT+ AM++G ++  R  +AL +F  M  + +  D V+ SSV+   A+ G G E+ D
Sbjct: 294 FKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMD 353

Query: 242 VFAQSDNKFSRN------------------VHGQQVHCLTIKLGFEA-------DLHLSN 276
           VF Q      R                   +HG++ HC ++K   +        DL + N
Sbjct: 354 VFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVIN 413

Query: 277 SLLDMYAKNGDMDSAEVIFSNL--PERSVVSWNVMIAGYGQKYQSTKAIELLQRM---KS 331
           +L+DMYAK   ++ A  +F  +   +R VV+W VMI GY Q   +  A++L   M    +
Sbjct: 414 ALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDN 473

Query: 332 CGFEPDEVTSINMLVACVR-------------------------------------SGDI 354
           C   P++ T   +L+AC R                                     SGD+
Sbjct: 474 C-IVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDV 532

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
            T + +FDSM   +  SW ++L+ Y      ++A ++F EM+   +  D  T  ++L +C
Sbjct: 533 DTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYAC 592

Query: 415 AAMGI 419
           +  G+
Sbjct: 593 SHSGM 597



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 178/411 (43%), Gaps = 49/411 (11%)

Query: 343 NMLVACVRSGDIKTGREMFDSMPSPSVSS---WNAMLSSYSQSENHKEAIKLFREMQFRG 399
           N++   + S  I     + +   +PS SS   WN ++       +   A++LFR M+   
Sbjct: 62  NLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLH 121

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
             PD  T   +  +C  +   E G  +H   ++     + +V + +I +Y KC+    A 
Sbjct: 122 WTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHAR 181

Query: 460 RVFHRIPE---LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSC 515
           +VF  +      D V WNS+++  S   +   A   F++M     + P       +L  C
Sbjct: 182 KVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVC 241

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
             L     GRQVH    + G V D+FVG+AL++MY KCG +  A + F+ M  K+ VTWN
Sbjct: 242 GYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWN 301

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM--- 632
            M+ GY+QNG  ++A+ L+  M    ++ D +T+ ++++  +  G     +++F  M   
Sbjct: 302 AMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGC 361

Query: 633 --------------------QLDHGVEP-------IL--DH---------YTCMIDCLGR 654
                                L HG E        IL  +H            +ID   +
Sbjct: 362 RCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAK 421

Query: 655 AGHFHEAEMLIDEMPCKD-DPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
                 A  + DE+  KD D V W V++     H +   A +   E+F++D
Sbjct: 422 CKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKID 472


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 212/676 (31%), Positives = 351/676 (51%), Gaps = 61/676 (9%)

Query: 112 SNEGFVPTHITLASVFKASTALL-----DVEHGRRCHGLVIKIGLDKNIYVANALLSLYA 166
           S+  ++P+H     V+K  +A+L      ++   +   L+IK GL         L+SL+ 
Sbjct: 66  SSRTYIPSH-----VYKHPSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFC 120

Query: 167 KCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS 226
           K G    A  VF+ + +  +  +  M+ G A+   + +A+  F  M    V     + + 
Sbjct: 121 KFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTY 180

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           +L VC               DN   R   G+++HC  I  GF +++     +++MYAK  
Sbjct: 181 LLKVCG--------------DNADLRK--GKEIHCQLIVNGFASNVFAMTGVVNMYAKCR 224

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
            ++ A  +F  +PER +V WN +I+GY Q      A+EL+ RM+  G  PD +T +++L 
Sbjct: 225 LVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILP 284

Query: 347 ACVRSGDIKTGREM-----------------------------------FDSMPSPSVSS 371
           A    G ++ GR +                                   FD M   +V S
Sbjct: 285 AVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVS 344

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           WN+M+  Y Q+ +   A+++F++M    V+    T+   L +CA +G +E G+ VH    
Sbjct: 345 WNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLD 404

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           +     D  V + LI +YSKC+R ++A  +F  +    +V WN+MI G + N    EA  
Sbjct: 405 QLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAID 464

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
           +F +M+   + P  F+  +V+ + A+LS   Q + +H  + +     ++FV +AL++MY 
Sbjct: 465 YFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYA 524

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCG ++ AR+ FDMM  ++  TWN MI GY  +G G  A+ L++ M    +KP+++TF+ 
Sbjct: 525 KCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLC 584

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +L+ACSHSGLV+ G + F SM+ D+G+EP +DHY  M+D LGRA   +EA   I +MP +
Sbjct: 585 VLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIE 644

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
               ++  +L +CR+H NV L ++AA  +F LDP +   + LLANIY++   WD +  VR
Sbjct: 645 PAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVR 704

Query: 732 ELMSENCIVKDPAYSL 747
             M +  I K P +S+
Sbjct: 705 TTMEKKGIQKTPGWSV 720



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/556 (25%), Positives = 255/556 (45%), Gaps = 82/556 (14%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           I++NGL+ +     +L+ L+ K  + H A  +F  +  K                     
Sbjct: 100 IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDK--------------------- 138

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
               DE+       ++ ++    RN   + A+S + +M  +G  P       + K     
Sbjct: 139 ---IDEL-------YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDN 188

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
            D+  G+  H  +I  G   N++    ++++YAKC   + A  +F+ M E + V +  ++
Sbjct: 189 ADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTII 248

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           SG A+      ALE+   M  +    DS+++ S+L   A  G             +  R+
Sbjct: 249 SGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG-----------SLRIGRS 297

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
           +HG      +++ GFE+ +++S +L+DMY+K G + +A +IF  +  ++VVSWN MI GY
Sbjct: 298 IHG-----YSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGY 352

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--------------- 358
            Q      A+E+ Q+M     E   VT +  L AC   GD++ GR               
Sbjct: 353 VQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDV 412

Query: 359 --------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                               E+F+++   ++ SWNAM+  Y+Q+    EAI  F +MQ +
Sbjct: 413 SVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQ 472

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
            +KPD  T+  ++ + A + +L   K +H   ++T    + +VA+ L+ +Y+KC     A
Sbjct: 473 NIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTA 532

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            ++F  + E  +  WN+MI G   + L   A   F++M++  + P + +F  VLS+C+  
Sbjct: 533 RKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHS 592

Query: 519 SSSFQGRQVHAQIEKD 534
               +G Q    ++KD
Sbjct: 593 GLVEEGFQYFGSMKKD 608



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 214/454 (47%), Gaps = 82/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++ NG   + F    ++ +Y+KC                              
Sbjct: 194 GKEIHCQLIVNGFASNVFAMTGVVNMYAKCRL---------------------------- 225

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E AYK+FD MPER++V WN +IS   +NG  + AL +  +M  EG  P  IT+ S+
Sbjct: 226 ---VEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSI 282

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   +  +  GR  HG  ++ G +  + V+ AL+ +Y+KCG    A  +F+ M+    
Sbjct: 283 LPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTV 342

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +M+ G  +      A+E+F+ M+ + V + +V++   L  CA  G  VE       
Sbjct: 343 VSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLG-DVE------- 394

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ VH L  +L   +D+ + NSL+ MY+K   +D A  IF NL  +++VSW
Sbjct: 395 --------QGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSW 446

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA------------------- 347
           N MI GY Q  +  +AI+   +M+    +PD  T ++++ A                   
Sbjct: 447 NAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIR 506

Query: 348 -CV---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
            C+               + G + T R++FD M    V++WNAM+  Y      K A++L
Sbjct: 507 TCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALEL 566

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           F +M+   +KP+  T   +LS+C+  G++E G Q
Sbjct: 567 FEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQ 600



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 206/424 (48%), Gaps = 55/424 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H + +R G      +   L+++YSKC +  +A+ +FD+M  K              
Sbjct: 295 GRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGK-------------- 340

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             VVSWN++I   V+NG    A+ ++ KM +E    T++T+   
Sbjct: 341 -----------------TVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGA 383

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L DVE GR  H L+ ++ L  ++ V N+L+S+Y+KC     A  +FE +     
Sbjct: 384 LHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTL 443

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ AM+ G A+  R+ EA++ F  M  + +  DS ++ SV+   A      E  V  Q+
Sbjct: 444 VSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALA------ELSVLPQA 497

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                     + +H L I+   + ++ ++ +L+DMYAK G + +A  +F  + ER V +W
Sbjct: 498 ----------KWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTW 547

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N MI GYG       A+EL ++MK    +P+EVT + +L AC  SG ++ G + F SM  
Sbjct: 548 NAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKK 607

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P++  + AM+    ++    EA    ++M    ++P  +    +L +C     +E
Sbjct: 608 DYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMP---IEPAISVFGAMLGACRIHKNVE 664

Query: 422 SGKQ 425
            G++
Sbjct: 665 LGEK 668


>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1347

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 244/778 (31%), Positives = 394/778 (50%), Gaps = 94/778 (12%)

Query: 10   LHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
            LHAH+L  G L  D     +LIE Y+   +  S++ +F+  P+ D + +  ++  +C   
Sbjct: 578  LHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLI--KC--- 632

Query: 69   DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
                           NV  W +L+ A         A+ +Y+++ +E    +     SV +
Sbjct: 633  ---------------NV--WCHLLDA---------AIDLYHRLVSEKTQISKFVFPSVLR 666

Query: 129  ASTALLDVEH---GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
            A       EH   GR+ HG +IK G+D +  +  +LL +Y + G    A  VF+ M   +
Sbjct: 667  ACAG--SREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRD 724

Query: 186  EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             V ++ ++S   +   V++AL MF+ M+   V  D+V++ SV+  CA  GC         
Sbjct: 725  LVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC--------- 775

Query: 246  SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
               + +R+VHGQ    +T K+ F+ D  L NSLL MY+K GD+ S+E IF  + +++ VS
Sbjct: 776  --LRIARSVHGQ----ITRKM-FDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVS 828

Query: 306  WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
            W  MI+ Y +   S KA+     M   G EP+ VT  ++L +C  +G I+ G+ +     
Sbjct: 829  WTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAI 888

Query: 361  -------FDSMPSPSVSS-------------------------WNAMLSSYSQSENHKEA 388
                   ++S+ SP++                           WN+ +S Y+      EA
Sbjct: 889  RRELDPNYESL-SPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEA 947

Query: 389  IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
            + LFR+M    +KPD  TLA I+S+C   G++  GKQ+H   ++T    D +V + +I +
Sbjct: 948  LCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVS-DEFVQNSVIDM 1006

Query: 449  YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
            YSK     LA  VF +I    IV WNSM+ G S N   +EA   F  M  + +   + +F
Sbjct: 1007 YSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTF 1066

Query: 509  ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
              V+ +C+ + S  +GR VH ++   G + D+F  +ALI+MY KCGD+  A   F  M  
Sbjct: 1067 LAVIQACSSIGSLEKGRWVHHKLIVCG-IKDLFTDTALIDMYAKCGDLNTAETVFRAMSN 1125

Query: 569  KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            ++ V+W+ MI+ Y  +G    A+  +  M+ SG KP+++ F+ +L+AC HSG V+ G   
Sbjct: 1126 RSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYY 1185

Query: 629  FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
            FN M+L  GV P  +H+ C ID L R+G   EA   I EMP   D  +W  L++ CR+H 
Sbjct: 1186 FNLMKL-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQ 1244

Query: 689  NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             + + K    ++  +   ++  Y+LL+NIY+  G W++ R +R  M    + K P YS
Sbjct: 1245 KMDIIKAIKNDISDIVTDDTGYYTLLSNIYAEEGEWEEFRRMRSAMKSLNLKKVPGYS 1302



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 4/172 (2%)

Query: 526 QVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           Q+HA +   G +  D    + LIE Y   G    +R  F+     ++  +  +I      
Sbjct: 577 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWC 636

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL-VDVGVEIFNSMQLDHGVEPILD 643
              D A+ LY  +++   +     F ++L AC+ S   + VG ++   + +  GV+    
Sbjct: 637 HLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRI-IKSGVDDDAV 695

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
             T ++   G+ G+  +AE + D MP +D  V W  L+SSC  +  V  A R
Sbjct: 696 IETSLLCMYGQTGNLSDAEKVFDGMPVRD-LVAWSTLVSSCLENCEVLKALR 746


>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 233/787 (29%), Positives = 389/787 (49%), Gaps = 123/787 (15%)

Query: 1    KKAHVAGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
            ++A   G+ +HA IL+NG F   + ++  +L+  Y+KC                      
Sbjct: 1187 ERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKC---------------------- 1224

Query: 59   AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
                     D  E A +LF  +  RNV SW  ++    R G  E AL  + +M   G  P
Sbjct: 1225 ---------DFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFP 1275

Query: 119  THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
             +  L +V KA  +L  +  G+  HG V+K+G    ++V+++L+ +Y KCG  + A  VF
Sbjct: 1276 DNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVF 1335

Query: 179  EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            + M E N VT+ +M+ G  +     EA+++F  M  + +    V+++S L   A     +
Sbjct: 1336 DSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALI 1395

Query: 239  ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
            E                G+Q H + I    + D  L +S+++ Y+K G ++ AE++FS +
Sbjct: 1396 E----------------GKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRM 1439

Query: 299  PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
             E+ VV+WN++I+ Y Q +Q  KA+ +   M+S     D VT  ++L A   + +IK G+
Sbjct: 1440 LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGK 1499

Query: 359  E-----------------------------------MFDSMPSPSVSSWNAMLSSYSQSE 383
            E                                   +FDS     +  WN +L++Y+Q  
Sbjct: 1500 EGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVG 1559

Query: 384  NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
               EA+KLF +MQF  V P+     +I  +   +G L +G                    
Sbjct: 1560 LSGEALKLFYQMQFDSVPPN-----VISWNSVILGFLRNG-------------------- 1594

Query: 444  GLIGIYSKCQRNELAERVFHRIPEL----DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
                     Q NE A+ +F ++  L    +++ W ++I+GL+ +    EA +FF++M++ 
Sbjct: 1595 ---------QVNE-AKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEA 1644

Query: 500  EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
             + P+  S  +VL +C  + S + GR +H  I +  +   + V ++L++MY KCG I  A
Sbjct: 1645 GIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEA 1704

Query: 560  RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
            ++ F MM  K    +N MI  YA +G   EA+ L+K +   G++PD ITF +IL+ACSH+
Sbjct: 1705 KKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHA 1764

Query: 620  GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
            GLV+ G+ +F  M   H + PI++HY C++  L R G+  EA  LI  MP + D  I   
Sbjct: 1765 GLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGS 1824

Query: 680  LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
            LL++CR H  + L +  ++ LF+L+P NS  Y  L+N Y++ GRW ++  +R+LM    +
Sbjct: 1825 LLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGL 1884

Query: 740  VKDPAYS 746
             K+P  S
Sbjct: 1885 RKNPGCS 1891



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 179/363 (49%), Gaps = 18/363 (4%)

Query: 339  VTSINMLVACVRSGDIKTGR----EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
            +   N+L A V+S    + R    +  D        S+   +SS  +  + +E++ L  E
Sbjct: 1105 LIGFNVLFASVKSSKFASTRLAKLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHLLSE 1164

Query: 395  MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI--DNYVASGLIGIYSKC 452
            M+F   +        +L  C     L +G+Q+HA  LK       + YV + L+  Y+KC
Sbjct: 1165 MEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKC 1224

Query: 453  QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
               E+A R+FHR+   ++  W +++          +A + F +M++N ++P  F    VL
Sbjct: 1225 DFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVL 1284

Query: 513  SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
             +C  L     G+ VH  + K G+   +FV S+L++MY KCG +  AR+ FD M  KN V
Sbjct: 1285 KACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVV 1344

Query: 573  TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH-----SGLVDVGVE 627
            TWN MI GY QNG   EA+ ++ DM   G++P  +T  + L+A ++      G     + 
Sbjct: 1345 TWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIA 1404

Query: 628  IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            I NS+ LD+    IL   + +I+   + G   +AE++   M  + D V W +L+SS   H
Sbjct: 1405 ILNSLDLDN----ILG--SSIINFYSKVGLIEDAELVFSRM-LEKDVVTWNLLISSYVQH 1457

Query: 688  ANV 690
              V
Sbjct: 1458 HQV 1460


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 226/710 (31%), Positives = 384/710 (54%), Gaps = 59/710 (8%)

Query: 75  KLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALL 134
           +LFDE P++ +   N+L+    RN   ++AL+++  +   G      +L+ V K    L 
Sbjct: 47  QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D   G++ H   IK G  +++ V  +L+ +Y K    +    VF+EM   N V++T++++
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G  +     +AL++F  M  + +  +  + ++VLG  A +G  VE               
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADG-AVEK-------------- 211

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G QVH + IK G ++ + + NS+++MY+K+  +  A+ +F ++  R+ VSWN MIAG+ 
Sbjct: 212 -GVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFV 270

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VRSG-----D 353
                 +A EL  RM+  G +  +     ++  C                +++G     +
Sbjct: 271 TNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLN 330

Query: 354 IKTG--------REMFDSMP-------SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           IKT          E+ D+           +V SW A++S Y Q+     A+ LF +M+  
Sbjct: 331 IKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRRE 390

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           GV+P+  T + IL++ AA+    S  Q+HA  +KT       V + L   YSK      A
Sbjct: 391 GVRPNHFTYSTILTANAAV----SPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEA 446

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
            ++F  I E DIV W++M++G +    DIE A   F Q+ +  + P +F+F++VL++CA 
Sbjct: 447 AKIFELIDEKDIVAWSAMLSGYAQMG-DIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAA 505

Query: 518 LSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
            ++S  QG+Q H+   K G+ N + V SAL+ MY K G+I  A + F     ++ V+WN 
Sbjct: 506 PTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNS 565

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDH 636
           MI GYAQ+G G ++++++++M +  ++ D ITF+ +++AC+H+GLV+ G   F+ M  D+
Sbjct: 566 MISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDY 625

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA 696
            + P ++HY+CM+D   RAG   +A  LI++MP      IW  LL++CR+H NV+L + A
Sbjct: 626 HIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELA 685

Query: 697 AEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           AE+L  L P++SA Y LL+NIY++ G W +   VR+LM    + K+  YS
Sbjct: 686 AEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYS 735



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 155/597 (25%), Positives = 285/597 (47%), Gaps = 81/597 (13%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            + GK +H   ++ G  +D  +   L+++Y K  +    + +FD+M  K++ SW ++L+ 
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA- 166

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                     Y+                     +NGL E+AL ++++M  EG  P   T 
Sbjct: 167 ---------GYR---------------------QNGLNEQALKLFSQMQLEGIKPNPFTF 196

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A+V     A   VE G + H +VIK GLD  I+V N+++++Y+K      A  VF+ M  
Sbjct: 197 AAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMEN 256

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V++ +M++G       +EA E+F  M  + V +     ++V+ +CA     ++   F
Sbjct: 257 RNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCAN----IKEMSF 312

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL-PERS 302
           A            +Q+HC  IK G + DL++  +L+  Y+K  ++D A  +F  +   ++
Sbjct: 313 A------------KQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQN 360

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------- 349
           VVSW  +I+GY Q  ++ +A+ L  +M+  G  P+  T   +L A               
Sbjct: 361 VVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVK 420

Query: 350 ------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + GD     ++F+ +    + +W+AMLS Y+Q  + + A+K+
Sbjct: 421 TNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKI 480

Query: 392 FREMQFRGVKPDRTTLAIILSSCAA-MGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           F ++   GV+P+  T + +L++CAA    +E GKQ H+ S+K+       V+S L+ +Y+
Sbjct: 481 FLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYA 540

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           K    E A  VF R  + D+V WNSMI+G + +    ++   F++MR   +     +F  
Sbjct: 541 KRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIG 600

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDIYGARQFFDMM 566
           V+S+C       +G++    + KD ++       S ++++Y + G +  A    + M
Sbjct: 601 VISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKM 657



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 60/318 (18%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V+   +HA +++    +   +   L + YSK  + + A  +F+ +  KDI +W+A+LS
Sbjct: 407 AAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLS 466

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              +  D+E A K+F +                               ++ EG  P   T
Sbjct: 467 GYAQMGDIEGAVKIFLQ-------------------------------LAKEGVEPNEFT 495

Query: 123 LASVFKASTA-LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            +SV  A  A    VE G++ H   IK G    + V++AL+++YAK G  + A  VF+  
Sbjct: 496 FSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ 555

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + + V++ +M+SG A+     ++L++F  M  K + +D ++   V+  C   G   E  
Sbjct: 556 VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNE-- 613

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS------LLDMYAKNGDMDSAEVIF 295
                         GQ+   L +K     D H+  +      ++D+Y++ G ++ A  + 
Sbjct: 614 --------------GQRYFDLMVK-----DYHIVPTMEHYSCMVDLYSRAGMLEKAMDLI 654

Query: 296 SNLP-ERSVVSWNVMIAG 312
           + +P       W  ++A 
Sbjct: 655 NKMPFPAGATIWRTLLAA 672


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 211/613 (34%), Positives = 324/613 (52%), Gaps = 58/613 (9%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKC--GWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
           ++ H  +IK GL    +  + L+   A    G   +A+ +F+ +  PN V +  M+ GL+
Sbjct: 45  KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLS 104

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-G 256
            ++    ALE +  MI      +  +  S+   C +                  R  H G
Sbjct: 105 SSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTK-----------------IRGAHEG 147

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +QVH   +KLG E +  +  SL++MYA+NG++ +A ++F     R  VS+  +I GY  K
Sbjct: 148 KQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASK 207

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                              G +   RE+FD +P   V SWNAM+
Sbjct: 208 -----------------------------------GFLDEARELFDEIPVRDVVSWNAMI 232

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI-LESGKQVHAASLKTAS 435
           S Y+QS   +EA+  F EM+   V P+ +T+  +LS+CA  G  L+ G  V +       
Sbjct: 233 SGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGL 292

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
             +  + +GLI +Y KC   E A  +F +I + ++V WN MI G +  S   EA   F++
Sbjct: 293 GSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRR 352

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD--GYVNDIFVGSALIEMYCKC 553
           M Q+ + P   +F ++L +CA L +   G+ VHA ++K+     N + + ++LI+MY KC
Sbjct: 353 MMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKC 412

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           GD+  A++ FD M+ K+  TWN MI G+A +G+ D A+ L+  M + G  PDDITFV +L
Sbjct: 413 GDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVL 472

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
           TAC H+GL+ +G   F+SM  D+ V P L HY CMID  GRAG F EAE L+  M  K D
Sbjct: 473 TACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPD 532

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
             IW  LL +CR+H  + LA+  A+ LF L+P+N + Y LL+NIY+  GRW+D+  +R  
Sbjct: 533 GAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTR 592

Query: 734 MSENCIVKDPAYS 746
           +++N + K P  S
Sbjct: 593 LNDNRMKKVPGCS 605



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 212/416 (50%), Gaps = 27/416 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HAH+L+ GL  + F+   LI +Y++     +A+ +FDK   +D  S+ A+++    
Sbjct: 147 GKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYAS 206

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A +LFDE+P R+VVSWN +IS   ++G  E+A++ + +M      P   T+ SV
Sbjct: 207 KGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSV 266

Query: 127 FKA-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A + +   ++ G      +   GL  NI + N L+ +Y KCG  + A  +FE++ + N
Sbjct: 267 LSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKN 326

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++  M+ G        EAL +FR M++  +  + V+  S+L  CA  G     D+   
Sbjct: 327 VVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGA---LDL--- 380

Query: 246 SDNKFSRNVHGQQVHCLTIK--LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                     G+ VH    K     +  + L  SL+DMYAK GD+  A+ IF  +  +S+
Sbjct: 381 ----------GKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSL 430

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
            +WN MI+G+     +  A+ L  RM S GF PD++T + +L AC  +G +  GR  F S
Sbjct: 431 ATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSS 490

Query: 364 M-----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           M      SP +  +  M+  + ++    EA  L + M+   +KPD      +L +C
Sbjct: 491 MIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNME---MKPDGAIWCSLLGAC 543



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 216/493 (43%), Gaps = 112/493 (22%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H+ I++ GL +  F  ++LIE  +               PH                
Sbjct: 45  KQIHSQIIKTGLHNTHFALSKLIEFCAVS-------------PH---------------- 75

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            DL +A  LF  +   N V WN++I  L  +     AL  Y  M + G  P   T  S+F
Sbjct: 76  GDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIF 135

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K+ T +     G++ H  V+K+GL+ N +V  +L+++YA+ G   +A  VF++ S  + V
Sbjct: 136 KSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAV 195

Query: 188 TFTAM-------------------------------MSGLAKTDRVVEALEMFRLMIRKA 216
           +FTA+                               +SG A++ RV EA+  F  M R  
Sbjct: 196 SFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAK 255

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V+ +  ++ SVL  CA+ G  ++                G  V       G  +++ L N
Sbjct: 256 VTPNVSTMLSVLSACAQSGSSLQL---------------GNWVRSWIEDRGLGSNIRLVN 300

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
            L+DMY K GD++ A  +F  + +++VVSWNVMI GY       +A+ L +RM     +P
Sbjct: 301 GLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDP 360

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           ++VT +++L AC                                      + GD+   + 
Sbjct: 361 NDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKR 420

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +FD M + S+++WNAM+S ++   +   A+ LF  M   G  PD  T   +L++C   G+
Sbjct: 421 IFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGL 480

Query: 420 LESGKQVHAASLK 432
           L  G++  ++ ++
Sbjct: 481 LSLGRRYFSSMIQ 493



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 175/358 (48%), Gaps = 51/358 (14%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL--AERVFHRIPE 467
           +LS+C     L++ KQ+H+  +KT  H  ++  S LI   +     +L  A  +F  I  
Sbjct: 34  LLSNCKT---LQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRN 90

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            + V WN MI GLS +     A  ++  M  +   P +++F ++  SC K+  + +G+QV
Sbjct: 91  PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYG----------------------------- 558
           HA + K G  ++ FV ++LI MY + G++                               
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210

Query: 559 --ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             AR+ FD +  ++ V+WN MI GYAQ+G  +EA+  +++M  + V P+  T +++L+AC
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSAC 270

Query: 617 SHSG-LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           + SG  + +G  + + ++ D G+   +     +ID   + G   EA  L +++  K + V
Sbjct: 271 AQSGSSLQLGNWVRSWIE-DRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK-NVV 328

Query: 676 IWEVLLS-----SCRLHANVRLAKRAAEELFRLDPKNSAPYSLL---ANIYS-SLGRW 724
            W V++      SC   A + L +R  +    +DP +    S+L   AN+ +  LG+W
Sbjct: 329 SWNVMIGGYTHMSCYKEA-LGLFRRMMQS--NIDPNDVTFLSILPACANLGALDLGKW 383


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 207/656 (31%), Positives = 341/656 (51%), Gaps = 51/656 (7%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T   +F+    L D   G++    +I+ G   NIY  N L+ L++ CG    A   F+ +
Sbjct: 63  TYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSV 122

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
                VT+ A+++G A+   V EA  +FR M+ +A+    ++   VL  C+         
Sbjct: 123 ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACS--------- 173

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
             + +  K  +  H Q      IK+GF +D  +  +L+ MY K G MD A  +F  L +R
Sbjct: 174 --SPAGLKLGKEFHAQ-----VIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKR 226

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
            V ++NVMI GY +     KA +L  RM+  GF+P+ ++ +++L  C             
Sbjct: 227 DVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVH 286

Query: 349 -----------VR-----------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                      VR            G I+  R +FD M    V SW  M+  Y+++ N +
Sbjct: 287 AQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIE 346

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           +A  LF  MQ  G++PDR T   I+++CA+   L   +++H+  ++     D  V + L+
Sbjct: 347 DAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALV 406

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y+KC   + A +VF  +   D+V W++MI     N    EAF  F  M++N + P   
Sbjct: 407 HMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVV 466

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++  +L++C  L +   G +++ Q  K   V+ I VG+ALI M  K G I  AR  F+ M
Sbjct: 467 TYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENM 526

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++ VTWN MI GY+ +G   EA+ L+  M+    +P+ +TFV +L+ACS +G V+ G 
Sbjct: 527 VQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGR 586

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
             F+ +    G+ P ++ Y CM+D LGRAG   EAE+LI+ MP K +  IW  LL++CR+
Sbjct: 587 RFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRI 646

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           + N+ +A+RAAE     +P + A Y  L+++Y++ G W+++  VR++M    + K+
Sbjct: 647 YGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKE 702



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 157/611 (25%), Positives = 277/611 (45%), Gaps = 88/611 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +  HI+++G   + +  N LI+L+S C N   A+  FD + +K + +WNAI++   +
Sbjct: 80  GKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQ 139

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              ++ A+ LF                                +M +E   P+ IT   V
Sbjct: 140 LGHVKEAFALF-------------------------------RQMVDEAMEPSIITFLIV 168

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++   ++ G+  H  VIK+G   +  +  AL+S+Y K G    A  VF+ + + + 
Sbjct: 169 LDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDV 228

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            TF  M+ G AK+    +A ++F  M ++    + +S  S+L     +GC     +    
Sbjct: 229 STFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSIL-----DGCSTPEAL---- 279

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ VH   +  G   D+ ++ +L+ MY   G ++ A  +F  +  R VVSW
Sbjct: 280 -------AWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSW 332

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD------------- 353
            VMI GY +      A  L   M+  G +PD +T I+++ AC  S D             
Sbjct: 333 TVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVR 392

Query: 354 ----------------------IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                 IK  R++FD+M    V SW+AM+ +Y ++   +EA + 
Sbjct: 393 AGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFET 452

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT--ASHIDNYVASGLIGIY 449
           F  M+   V+PD  T   +L++C  +G L+ G +++  ++K    SHI   V + LI + 
Sbjct: 453 FHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIP--VGNALINMN 510

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            K    E A  +F  + + D+V WN MI G SL+    EA   F +M +    P   +F 
Sbjct: 511 VKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFV 570

Query: 510 TVLSSCAKLSSSFQGRQVHAQ-IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
            VLS+C++     +GR+  +  ++  G V  + +   ++++  + G++  A    + M  
Sbjct: 571 GVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPL 630

Query: 569 K-NTVTWNEMI 578
           K N+  W+ ++
Sbjct: 631 KPNSSIWSTLL 641



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 194/424 (45%), Gaps = 55/424 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA  +  GL DD  +   LI +Y  C +                            
Sbjct: 282 GKAVHAQCMNTGLVDDVRVATALIRMYMGCGS---------------------------- 313

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A ++FD+M  R+VVSW  +I     N   E A  ++  M  EG  P  IT   +
Sbjct: 314 ---IEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHI 370

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  +  D+   R  H  V++ G   ++ V  AL+ +YAKCG  K A  VF+ MS  + 
Sbjct: 371 INACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDV 430

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++AM+    +     EA E F LM R  V  D V+  ++L  C   G     D+    
Sbjct: 431 VSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGA---LDL---- 483

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G +++   IK    + + + N+L++M  K+G ++ A  IF N+ +R VV+W
Sbjct: 484 ---------GMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTW 534

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           NVMI GY     + +A++L  RM    F P+ VT + +L AC R+G ++ GR  F  +  
Sbjct: 535 NVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLD 594

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P++  +  M+    ++    EA  L   M    +KP+ +  + +L++C   G L+
Sbjct: 595 GRGIVPTMELYGCMVDLLGRAGELDEAELLINRMP---LKPNSSIWSTLLAACRIYGNLD 651

Query: 422 SGKQ 425
             ++
Sbjct: 652 VAER 655



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 150/288 (52%), Gaps = 2/288 (0%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  T   +   C  +     GKQV    +++   ++ Y  + LI ++S C     A + F
Sbjct: 60  DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             +    +V WN++IAG +      EAF  F+QM    M P+  +F  VL +C+  +   
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G++ HAQ+ K G+V+D  +G+AL+ MY K G + GARQ FD ++ ++  T+N MI GYA
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           ++G G++A +L+  M   G KP+ I+F++IL  CS    +  G  + ++  ++ G+   +
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAV-HAQCMNTGLVDDV 298

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
              T +I      G    A  + D+M  + D V W V++     ++N+
Sbjct: 299 RVATALIRMYMGCGSIEGARRVFDKMKVR-DVVSWTVMIRGYAENSNI 345


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 220/718 (30%), Positives = 367/718 (51%), Gaps = 57/718 (7%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           +  D  FA +LFD+ P R++   N L+    R    ++AL ++  +   G  P   T++ 
Sbjct: 48  RDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSC 107

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V        +   G + H   +K GL  ++ V N+L+ +Y K G  +    VF+EM + +
Sbjct: 108 VLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRD 167

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ ++++G +      +  E+F LM  +    D  ++S+V+   A +G          
Sbjct: 168 VVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAI------ 221

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G Q+H L +KLGFE +  + NSL+ M +K+G +  A V+F N+  +  VS
Sbjct: 222 ----------GMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVS 271

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT------------------------- 340
           WN MIAG+    Q  +A E    M+  G +P   T                         
Sbjct: 272 WNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTL 331

Query: 341 ----SIN------MLVACVRSGDIKTGREMFDSMPS-PSVSSWNAMLSSYSQSENHKEAI 389
               S N      ++VA  +  +I     +F  M    SV SW AM+S Y Q+ +  +A+
Sbjct: 332 KSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAV 391

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF  M+  GVKP+  T + IL+   A+ I E    +HA  +KT     + V + L+  +
Sbjct: 392 NLFSLMRREGVKPNHFTYSTILTVQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAF 447

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            K      A +VF  I   D++ W++M+AG +      EA   F Q+ +  + P +F+F 
Sbjct: 448 VKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFC 507

Query: 510 TVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           +++++C   ++S  QG+Q HA   K    N + V S+L+ +Y K G+I  A + F     
Sbjct: 508 SIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKE 567

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           ++ V+WN MI GYAQ+G   +A+ ++++M    ++ D ITF+ +++AC+H+GLV  G   
Sbjct: 568 RDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNY 627

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           FN M  DH + P ++HY+CMID   RAG   +A  +I+ MP      +W ++L++ R+H 
Sbjct: 628 FNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHR 687

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           N+ L K AAE++  L+P++SA Y LL+NIY++ G W +   VR+LM +  + K+P YS
Sbjct: 688 NIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYS 745



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 166/627 (26%), Positives = 291/627 (46%), Gaps = 96/627 (15%)

Query: 19  LFDDTFL-----CNRLIELYSKCNNTHSAQHLFDKMPHK----DIYSWNAILSA------ 63
           LFD T L      N+L+  YS+C+ T  A HLF  +       D Y+ + +LS       
Sbjct: 58  LFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFN 117

Query: 64  ---------QC--------------------KSDDLEFAYKLFDEMPERNVVSWNNLISA 94
                    QC                    K+ ++    ++FDEM +R+VVSWN+L++ 
Sbjct: 118 GTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTG 177

Query: 95  LVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKN 154
              N   ++   ++  M  EG+ P + T+++V  A      V  G + H LV+K+G +  
Sbjct: 178 YSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETE 237

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
             V N+L+S+ +K G  + A  VF+ M   + V++ +M++G     + +EA E F  M  
Sbjct: 238 RLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQL 297

Query: 215 KAVSIDSVSLSSVLGVCAR-EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
                   + +SV+  CA  +  G+                  + +HC T+K G   + +
Sbjct: 298 AGAKPTHATFASVIKSCASLKELGLV-----------------RVLHCKTLKSGLSTNQN 340

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
           +  +L+    K  ++D A  +FS +   +SVVSW  MI+GY Q   + +A+ L   M+  
Sbjct: 341 VLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRRE 400

Query: 333 GFEPD---------------------EVTSIN----------MLVACVRSGDIKTGREMF 361
           G +P+                     EV   N          +L A V+ G+I    ++F
Sbjct: 401 GVKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVF 460

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA-MGIL 420
           + + +  V +W+AML+ Y+Q+   +EA K+F ++   G+KP+  T   I+++C A    +
Sbjct: 461 ELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASV 520

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
           E GKQ HA ++K   +    V+S L+ +Y+K    E A  +F R  E D+V WNSMI+G 
Sbjct: 521 EQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGY 580

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           + +    +A   F++M++  +     +F  V+S+CA      +G+     +  D ++N  
Sbjct: 581 AQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPT 640

Query: 541 FVG-SALIEMYCKCGDIYGARQFFDMM 566
               S +I++Y + G +  A    + M
Sbjct: 641 MEHYSCMIDLYSRAGMLGKAMDIINGM 667



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 201/455 (44%), Gaps = 88/455 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA +++ G   +  +CN LI + SK      A+ +FD M +KD  SWN+       
Sbjct: 222 GMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNS------- 274

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I+  V NG + +A   +N M   G  PTH T ASV
Sbjct: 275 ------------------------MIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASV 310

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K+  +L ++   R  H   +K GL  N  V  AL+    KC     A  +F  M     
Sbjct: 311 IKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQS 370

Query: 187 -VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++TAM+SG  +     +A+ +F LM R+ V  +  + S++L         V+  VF  
Sbjct: 371 VVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL--------TVQHAVFI- 421

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                       ++H   IK  +E    +  +LLD + K G++  A  +F  +  + V++
Sbjct: 422 -----------SEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIA 470

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           W+ M+AGY Q  ++ +A ++  ++   G +P+E T  +++ AC                 
Sbjct: 471 WSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYA 530

Query: 350 --------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + G+I++  E+F       + SWN+M+S Y+Q    K+A+
Sbjct: 531 IKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKAL 590

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           ++F EMQ R ++ D  T   ++S+CA  G++  G+
Sbjct: 591 EVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQ 625



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 164/335 (48%), Gaps = 3/335 (0%)

Query: 349 VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
           +R  D +  +++FD  P   +   N +L  YS+ +  +EA+ LF  +   G+ PD  T++
Sbjct: 47  LRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMS 106

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
            +LS CA       G+QVH   +K        V + L+ +Y+K        RVF  + + 
Sbjct: 107 CVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDR 166

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           D+V WNS++ G S N  + + +  F  M+     P  ++ +TV+++ A   +   G Q+H
Sbjct: 167 DVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIH 226

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
           A + K G+  +  V ++LI M  K G +  AR  FD M  K++V+WN MI G+  NG   
Sbjct: 227 ALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDL 286

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG-VEIFNSMQLDHGVEPILDHYTC 647
           EA   + +M  +G KP   TF +++ +C  + L ++G V + +   L  G+    +  T 
Sbjct: 287 EAFETFNNMQLAGAKPTHATFASVIKSC--ASLKELGLVRVLHCKTLKSGLSTNQNVLTA 344

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           ++  L +     +A  L   M      V W  ++S
Sbjct: 345 LMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMIS 379



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 5/118 (4%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  HA+ ++  L +   + + L+ LY+K  N  SA  +F +   +D+ SWN+++S   +
Sbjct: 523 GKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQ 582

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PT 119
               + A ++F+EM +RN+    +++  +ISA    GL  K  + +N M N+  + PT
Sbjct: 583 HGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPT 640


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 213/630 (33%), Positives = 329/630 (52%), Gaps = 88/630 (13%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           +N++  N+LLSLYAK G    A  VF EM E + V++T M+ GL +  R  EA++MF  M
Sbjct: 94  RNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDM 153

Query: 213 IRKAVSIDSVSLSSVLGVCA-REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           +   +S    +L++VL  CA  E  GV                 G++VH   +KLG  + 
Sbjct: 154 VTDGLSPTQFTLTNVLSSCAATEARGV-----------------GRKVHSFVVKLGLSSC 196

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + ++NS+L+MY K GD ++A  +F  +PERSV SWN M+                     
Sbjct: 197 VPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMV--------------------- 235

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                    S++  +     G +     +F++MP  ++ SWNA+++ Y+Q+  + +A+  
Sbjct: 236 ---------SLDAHL-----GRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWF 281

Query: 392 F-REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           F R + +  + PD  T+  +LS+CA +G++  GKQVHA  L++       V + LI +Y+
Sbjct: 282 FSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYA 341

Query: 451 KCQRNELAERV---------------------------------FHRIPELDIVCWNSMI 477
           K    E A  V                                 F  +   D+V W +MI
Sbjct: 342 KSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMI 401

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            G   N  + EA   F+ M ++   P  ++ A VLS CA L+    G+Q+H +  +    
Sbjct: 402 VGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQE 461

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHG-KNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
               V ++++ MY + G +  AR+ FD +H  K TVTW  MI   AQ+G G++AV L+++
Sbjct: 462 QSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEE 521

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M+  GVKPD ITFV +L+AC+H G VD G   F  +Q  HG+ P + HY CM+D L RAG
Sbjct: 522 MLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAG 581

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
            F EA+  I +MP + D + W  LLS+CR+H N  LA+ AAE+L  +DP NS  YS L+N
Sbjct: 582 LFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSN 641

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +YS+ GRW+D   + +   +  + K+  +S
Sbjct: 642 VYSACGRWNDAAKIWKRRKDKSVKKETGFS 671



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 238/503 (47%), Gaps = 60/503 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   G+ +H+ +++ GL     + N ++ +Y KC +  +A+ +F++MP + + SWNA++
Sbjct: 176 EARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMV 235

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTH 120
           S       ++ A  LF+ MP+R +VSWN +I+   +NGL  KAL  +++M S     P  
Sbjct: 236 SLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDE 295

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT--------- 171
            T+ SV  A   L  V  G++ H  +++  +     V NAL+S+YAK G           
Sbjct: 296 FTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQ 355

Query: 172 ------------------------KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
                                   KHA  +F+ MS  + V +TAM+ G  +     EA+E
Sbjct: 356 AVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAME 415

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +FRLMIR     +S ++++VL VCA   C +E               +G+Q+HC  I+  
Sbjct: 416 LFRLMIRSGPEPNSYTVAAVLSVCASLAC-LE---------------YGKQIHCKAIRSL 459

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVSWNVMIAGYGQKYQSTKAIELL 326
            E    +SNS++ MYA++G +  A  +F  +  R   V+W  MI    Q      A+ L 
Sbjct: 460 QEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLF 519

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQ 381
           + M   G +PD +T + +L AC   G +  G+  F  +       P +S +  M+   ++
Sbjct: 520 EEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLAR 579

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +    EA +  ++M    V+PD      +LS+C      +   ++ A  L +    ++  
Sbjct: 580 AGLFSEAQEFIQQMP---VEPDAIAWGSLLSACRVHKNADLA-ELAAEKLLSIDPGNSGA 635

Query: 442 ASGLIGIYSKCQRNELAERVFHR 464
            S L  +YS C R   A +++ R
Sbjct: 636 YSALSNVYSACGRWNDAAKIWKR 658



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 155/571 (27%), Positives = 258/571 (45%), Gaps = 100/571 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNT-----HSAQHLFDKMP--HKDIYSWN 58
           AG+ +HA  ++ GL    +LCN L+  Y+            A+ LFD++P   +++++WN
Sbjct: 41  AGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWN 100

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
           ++LS   KS  L  A  +F EMPER+ VSW  ++  L R G   +A+ ++  M  +G  P
Sbjct: 101 SLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSP 160

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
           T  TL +V  +  A      GR+ H  V+K+GL   + VAN++L++Y KCG  + A  VF
Sbjct: 161 TQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVF 220

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMF----------------------------- 209
           E M E +  ++ AM+S  A   R+  AL +F                             
Sbjct: 221 ERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALW 280

Query: 210 ---RLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFAQSDNKFSRNVH-GQQVHCL-- 262
              R++    ++ D  +++SVL  CA  G   +   V A      SR  + GQ  + L  
Sbjct: 281 FFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILR--SRMPYIGQVTNALIS 338

Query: 263 -------------TIKLGFEADLHLSN--SLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                         ++    ADL++ +  +LL+ Y K GDM  A  +F  +  R VV+W 
Sbjct: 339 MYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWT 398

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------- 348
            MI GY Q   + +A+EL + M   G EP+  T   +L  C                   
Sbjct: 399 AMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRS 458

Query: 349 ----------------VRSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSENHKEAIKL 391
                            RSG +   R +FD +       +W +M+ + +Q    ++A+ L
Sbjct: 459 LQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGL 518

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIY 449
           F EM   GVKPDR T   +LS+C  +G ++ GK+ +   L+    I   ++  + ++ + 
Sbjct: 519 FEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKR-YFQQLQDKHGIVPEMSHYACMVDLL 577

Query: 450 SKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           ++      A+    ++P E D + W S+++ 
Sbjct: 578 ARAGLFSEAQEFIQQMPVEPDAIAWGSLLSA 608



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 111/227 (48%), Gaps = 32/227 (14%)

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
           A+  + +  + L+ +Y+K  R   A  VF  +PE D V W  M+ GL+      EA   F
Sbjct: 91  AAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMF 150

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
             M  + + PTQF+   VLSSCA   +   GR+VH+ + K G  + + V ++++ MY KC
Sbjct: 151 LDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKC 210

Query: 554 GDIYGAR-------------------------------QFFDMMHGKNTVTWNEMIHGYA 582
           GD   AR                                 F+ M  +  V+WN +I GY 
Sbjct: 211 GDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYN 270

Query: 583 QNGYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGLVDVGVEI 628
           QNG   +A+  +  M++ S + PD+ T  ++L+AC++ G+V +G ++
Sbjct: 271 QNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQV 317



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 41/200 (20%)

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG-----ARQFF 563
           A +L  C   ++   GR +HA+  K G +   ++ + L+  Y       G     AR+ F
Sbjct: 27  ARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLF 86

Query: 564 DMMHG--KNTVTWNEMIHGYAQNG--------------------------------YGDE 589
           D +    +N  TWN ++  YA++G                                +G E
Sbjct: 87  DEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFG-E 145

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A++++ DM+  G+ P   T   +L++C+ +    VG ++ +S  +  G+   +     ++
Sbjct: 146 AIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKV-HSFVVKLGLSSCVPVANSVL 204

Query: 650 DCLGRAGHFHEAEMLIDEMP 669
           +  G+ G    A  + + MP
Sbjct: 205 NMYGKCGDAETARAVFERMP 224


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 203/596 (34%), Positives = 318/596 (53%), Gaps = 52/596 (8%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D N++  NALLS  A          +F  M E + V++ A+++G + T     +++++R 
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 212 MIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
           ++R+ +V    ++LS+++ V +           A SD        G  VHC  ++LGF A
Sbjct: 136 LLREESVRPTRITLSAMIMVAS-----------ALSDRAL-----GHSVHCQVLRLGFGA 179

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
              + + L+DMYAK G +  A  +F  +  ++VV +N +I G                  
Sbjct: 180 YAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGL----------------- 222

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                             +R   I+  + +F  M      +W  M++  +Q+    EA+ 
Sbjct: 223 ------------------LRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALD 264

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +FR M+  GV  D+ T   IL++C A+  LE GKQ+HA   +T    + +V S L+ +YS
Sbjct: 265 VFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYS 324

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC+   LAE VF R+   +I+ W +MI G   N+   EA   F +M+ + + P  F+  +
Sbjct: 325 KCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGS 384

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           V+SSCA L+S  +G Q H      G +  I V +AL+ +Y KCG I  A + FD M   +
Sbjct: 385 VISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHD 444

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+W  ++ GYAQ G   E + L++ M+A+G+KPD +TF+ +L+ACS +GLV+ G + F+
Sbjct: 445 QVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFD 504

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SMQ DHG+ PI DHYTCMID   R+G F EAE  I +MP   D   W  LLSSCRL  N+
Sbjct: 505 SMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNM 564

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + K AAE L   DP+N A Y LL +++++ G+W ++  +R  M +  + K+P  S
Sbjct: 565 EIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCS 620



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 252/551 (45%), Gaps = 91/551 (16%)

Query: 5   VAGKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           VAG + H  IL+  L    TFL N L+  Y+K      A+ +FD+MP  ++++ NA+LSA
Sbjct: 30  VAGAV-HCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSA 88

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHIT 122
              S  +    +LF  MPER+ VS+N LI+     G   +++ +Y  +  E  V PT IT
Sbjct: 89  LAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRIT 148

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L+++   ++AL D   G   H  V+++G     +V + L+ +YAK G  + A  VF+EM 
Sbjct: 149 LSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEME 208

Query: 183 -------------------------------EPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
                                          + + +T+T M++GL +    +EAL++FR 
Sbjct: 209 AKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRR 268

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M  + V ID  +  S+L  C       E                G+Q+H    +  +E +
Sbjct: 269 MRAEGVGIDQYTFGSILTACGALAALEE----------------GKQIHAYITRTWYEDN 312

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + + ++L+DMY+K   +  AE +F  +  R+++SW  MI GYGQ   S +A+     M+ 
Sbjct: 313 VFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQM 372

Query: 332 CGFEPDEVTSINMLVACV-----------------------------------RSGDIKT 356
            G +PD+ T  +++ +C                                    + G I+ 
Sbjct: 373 DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIED 432

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
              +FD M      SW A+++ Y+Q    KE I LF +M   G+KPD  T   +LS+C+ 
Sbjct: 433 AHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSR 492

Query: 417 MGILESGKQVHAASLKTASHI---DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVC 472
            G++E G     +  K    +   D+Y    +I +YS+  R + AE    ++P   D   
Sbjct: 493 AGLVEKGCDYFDSMQKDHGIVPIDDHYTC--MIDLYSRSGRFKEAEEFIKQMPHSPDAFG 550

Query: 473 WNSMIAGLSLN 483
           W ++++   L 
Sbjct: 551 WATLLSSCRLR 561



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/423 (29%), Positives = 212/423 (50%), Gaps = 24/423 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +LR G     F+ + L+++Y+K      A+ +F +M  K +  +N +++   +
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A  LF  M +R+ ++W  +++ L +NGL+ +AL V+ +M  EG      T  S+
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  AL  +E G++ H  + +   + N++V +AL+ +Y+KC   + A  VF  M+  N 
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TAM+ G  +     EA+  F  M    +  D  +L SV+  CA      E       
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEE------- 397

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q HCL +  G    + +SN+L+ +Y K G ++ A  +F  +     VSW
Sbjct: 398 ---------GAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 448

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             ++ GY Q  ++ + I+L ++M + G +PD VT I +L AC R+G ++ G + FDSM  
Sbjct: 449 TALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQK 508

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  M+  YS+S   KEA +  ++M      PD    A +LSSC   G +E
Sbjct: 509 DHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPH---SPDAFGWATLLSSCRLRGNME 565

Query: 422 SGK 424
            GK
Sbjct: 566 IGK 568



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 4/109 (3%)

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           F+ + L+  Y K G +  AR+ FD M   N  T N ++   A +    +  RL+    AS
Sbjct: 49  FLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLF----AS 104

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
             + D +++ A++T  S +G     V+++ ++  +  V P     + MI
Sbjct: 105 MPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153


>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 769

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 215/696 (30%), Positives = 362/696 (52%), Gaps = 54/696 (7%)

Query: 89  NNLISALVRNGLEEKALSVYN-KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           N+ I++L RN    +AL  ++    N  F     T  S+  A ++   +  GR+ H  ++
Sbjct: 32  NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 91

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
                 +  + N +LS+Y KCG  + A  VF+ M E N V++T++++G ++  +  EA+ 
Sbjct: 92  NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAIT 151

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           ++  M++  +  D  +  S++  CA  G     DV           V G+Q+H   IKL 
Sbjct: 152 LYLKMLQADLVPDQFAFGSIIKACACAG-----DV-----------VLGKQLHAQVIKLE 195

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
             + L   N+L+ MY +   M  A  +F  +P + ++SW+ +IAG+ Q     +A+  L+
Sbjct: 196 SSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLK 255

Query: 328 RMKSCG-FEPDEVTSINMLVAC-----------------------------------VRS 351
            M S G F P+E    + L AC                                    R 
Sbjct: 256 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARC 315

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           G + + R +F+ +  P  +SWN +++  + +    EA+ +F EM+  G  PD  +L  +L
Sbjct: 316 GFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLL 375

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDI 470
            +      L  G Q+H+  +K     D  V + L+ +Y+ C        +F     + D 
Sbjct: 376 CAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADS 435

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           V WN+++     +   +E    FK M  +E  P   +   +L  C ++SS   G QVH  
Sbjct: 436 VSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 495

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
             K G V + F+ + LI+MY KCG +  AR+ FD M   + V+W+ +I GYAQ+G+G+EA
Sbjct: 496 SWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEA 555

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           + L+++M +SG++P+ +TFV +LTACSH GLV+ G++++  MQ +HG+ P  +H +C++D
Sbjct: 556 LILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVD 615

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            L RAGH +EAE  IDEM  + D V+W+ LLS+C+   NV LA++AAE + ++DP NS  
Sbjct: 616 LLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTA 675

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + LL ++++S G W+D   +R  M ++ + K P  S
Sbjct: 676 HVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQS 711



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 165/656 (25%), Positives = 295/656 (44%), Gaps = 117/656 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H HIL +    DT L N ++ +Y KC +   A+                       
Sbjct: 83  GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAR----------------------- 119

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++FD MPERN+VS+ ++I+   +NG E +A+++Y KM     VP      S+
Sbjct: 120 --------EVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSI 171

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA     DV  G++ H  VIK+    ++   NAL+++Y +      A  VF  +   + 
Sbjct: 172 IKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDL 231

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           ++++++++G ++     EAL   + M+   V   +     S L  C+             
Sbjct: 232 ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS------------- 278

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                 R  +G Q+H L IKL    +     SL DMYA+ G +DSA  +F+ +      S
Sbjct: 279 ---SLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTAS 335

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-------C----VRSGDI 354
           WNV+IAG      + +A+ +   M++ GF PD ++  ++L A       C    + S  I
Sbjct: 336 WNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFII 395

Query: 355 KTG------------------------REMFDSMPSPSVS-SWNAMLSSYSQSENHKEAI 389
           K G                          +F+   + + S SWNA+L++  Q E   E +
Sbjct: 396 KCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEML 455

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +LF+ M     +PD  T+  +L  C  +  L+ G QVH  S KT   ++ ++ +GLI +Y
Sbjct: 456 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMY 515

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC     A R+F  +   D+V W+++I G + +    EA + F++M+ + + P   +F 
Sbjct: 516 AKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFV 575

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
            VL++C+ +    +G +++A ++ +        G +  + +C C                
Sbjct: 576 GVLTACSHVGLVEEGLKLYAIMQTEH-------GISPTKEHCSC---------------- 612

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
                  ++   A+ G+ +EA R   +M    ++PD + +  +L+AC   G VD+ 
Sbjct: 613 -------VVDLLARAGHLNEAERFIDEM---KLEPDVVVWKTLLSACKTQGNVDLA 658



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 231/515 (44%), Gaps = 88/515 (17%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK LHA +++          N LI +Y + N    A  +F  +P KD+ SW++I++  
Sbjct: 182 VLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAG- 240

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG-FVPTHITL 123
                       F ++                  G E +ALS   +M + G F P     
Sbjct: 241 ------------FSQL------------------GFEFEALSHLKEMLSFGVFHPNEYIF 270

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            S  KA ++LL  ++G + HGL IK+ L  N     +L  +YA+CG+   A  VF ++  
Sbjct: 271 GSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIER 330

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
           P+  ++  +++GLA      EA+ +F  M       D++SL S+L  CA+          
Sbjct: 331 PDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLL--CAQ---------- 378

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS- 302
                K      G Q+H   IK GF ADL + NSLL MY    D+     +F +   ++ 
Sbjct: 379 ----TKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKAD 434

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------- 349
            VSWN ++    Q  Q  + + L + M     EPD +T  N+L  CV             
Sbjct: 435 SVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHC 494

Query: 350 ----------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                 + G ++  R +FDSM +  V SW+ ++  Y+QS   +E
Sbjct: 495 YSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEE 554

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV--ASGL 445
           A+ LFREM+  G++P+  T   +L++C+ +G++E G +++A  ++T   I       S +
Sbjct: 555 ALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAI-MQTEHGISPTKEHCSCV 613

Query: 446 IGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           + + ++      AER    +  E D+V W ++++ 
Sbjct: 614 VDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSA 648


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 195/636 (30%), Positives = 349/636 (54%), Gaps = 52/636 (8%)

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
           VIK G+  + ++ ++L+++Y KC   + A  V EEM   +   +   +S       + EA
Sbjct: 15  VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           +++F LM    + ++    +S++   A  G           DN +     G+ +H    K
Sbjct: 75  VQLFYLMRHTRIRLNQFIFASLISAAASLG-----------DNHY-----GESIHACVCK 118

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
            GFE+D+ +SN+ + MY K   +++    F  +   ++ S N +++G+       +   +
Sbjct: 119 YGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRI 178

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--------------------------- 358
           L ++   GFEP+  T I++L  C   GD+  G+                           
Sbjct: 179 LIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAK 238

Query: 359 --------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
                   ++F  +P   V SW A+++ +  +E +   +++F +M   G  P+  T   I
Sbjct: 239 CGSANYACKVFGEIPERDVVSWTALITGFV-AEGYGSGLRIFNQMLAEGFNPNMYTFISI 297

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           L SC+++  ++ GKQVHA  +K +   +++V + L+ +Y+K +  E AE +F+R+ + D+
Sbjct: 298 LRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDL 357

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
             W  ++AG + +    +A   F QM++  + P +F+ A+ LS C+++++   GRQ+H+ 
Sbjct: 358 FAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSM 417

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
             K G   D+FV SAL++MY KCG +  A   FD +  ++TV+WN +I GY+Q+G G +A
Sbjct: 418 AIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKA 477

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           ++ ++ M+  G  PD++TF+ +L+ACSH GL++ G + FNS+   +G+ P ++HY CM+D
Sbjct: 478 LKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVD 537

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            LGRAG FHE E  I+EM    + +IWE +L +C++H N+   +RAA +LF L+P+  + 
Sbjct: 538 ILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSN 597

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y LL+N++++ G WDD+  VR LMS   + K+P  S
Sbjct: 598 YILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCS 633



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 163/657 (24%), Positives = 290/657 (44%), Gaps = 104/657 (15%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           +++NG+  D+ L + L+ +Y KC +   A+ + ++MP +D+  WN  LS+      L+ A
Sbjct: 15  VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
            +LF  M     +  N  I                               AS+  A+ +L
Sbjct: 75  VQLFYLM-RHTRIRLNQFI------------------------------FASLISAAASL 103

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
            D  +G   H  V K G + +I ++NA +++Y K    ++    F+ M   N  +   ++
Sbjct: 104 GDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLL 163

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           SG   T+   +   +   ++ +    +  +  S+L  CA +G           D    + 
Sbjct: 164 SGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKG-----------DLNEGKA 212

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
           +HGQ      IK G   D HL NSL+++YAK G  + A  +F  +PER VVSW  +I G+
Sbjct: 213 IHGQ-----VIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGF 267

Query: 314 -GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------- 359
             + Y S   + +  +M + GF P+  T I++L +C    D+  G++             
Sbjct: 268 VAEGYGS--GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGN 325

Query: 360 ----------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                                 +F+ +    + +W  +++ Y+Q    ++A+K F +MQ 
Sbjct: 326 DFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQR 385

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
            GVKP+  TLA  LS C+ +  L+SG+Q+H+ ++K     D +VAS L+ +Y+KC   E 
Sbjct: 386 EGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVED 445

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           AE VF  +   D V WN++I G S +    +A   F+ M      P + +F  VLS+C+ 
Sbjct: 446 AEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSH 505

Query: 518 LSSSFQGRQVHAQIEK-DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH-GKNTVTWN 575
           +    +G++    + K  G    I   + ++++  + G  +    F + M    N + W 
Sbjct: 506 MGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWE 565

Query: 576 EMIHGYAQNG---YGDEAVR--------------LYKDMIASGVKPDDITFVAILTA 615
            ++     +G   +G+ A                L  +M A+    DD+T V  L +
Sbjct: 566 TVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMS 622



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 218/441 (49%), Gaps = 57/441 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++++G+  D+ L N L+ +Y+KC + + A  +F ++P +D+ SW A       
Sbjct: 210 GKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTA------- 262

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LI+  V  G     L ++N+M  EGF P   T  S+
Sbjct: 263 ------------------------LITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISI 297

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            ++ ++L DV+ G++ H  ++K  LD N +V  AL+ +YAK  + + A  +F  + + + 
Sbjct: 298 LRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDL 357

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
             +T +++G A+  +  +A++ F  M R+ V  +  +L+S L  C+R          A  
Sbjct: 358 FAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSR---------IATL 408

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D+       G+Q+H + IK G   D+ ++++L+DMYAK G ++ AEV+F  L  R  VSW
Sbjct: 409 DS-------GRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSW 461

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N +I GY Q  Q  KA++  + M   G  PDEVT I +L AC   G I+ G++ F+S+  
Sbjct: 462 NTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSK 521

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               +P++  +  M+    ++    E      EM+   +  +      +L +C   G +E
Sbjct: 522 IYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK---LTSNVLIWETVLGACKMHGNIE 578

Query: 422 SGKQVHAASLKTASHID-NYV 441
            G++      +    ID NY+
Sbjct: 579 FGERAAMKLFELEPEIDSNYI 599



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/417 (23%), Positives = 195/417 (46%), Gaps = 15/417 (3%)

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
           +++ R+   G  PD     +++   V+   ++  R++ + MP   V  WN  LSS +   
Sbjct: 10  KIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPY 69

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
             +EA++LF  M+   ++ ++   A ++S+ A++G    G+ +HA   K     D  +++
Sbjct: 70  PLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISN 129

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
             + +Y K Q  E   + F  +   ++   N++++G        +      Q+      P
Sbjct: 130 AFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEP 189

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
             ++F ++L +CA      +G+ +H Q+ K G   D  + ++L+ +Y KCG    A + F
Sbjct: 190 NMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVF 249

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
             +  ++ V+W  +I G+   GYG   +R++  M+A G  P+  TF++IL +CS    VD
Sbjct: 250 GEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVD 308

Query: 624 VGVEIFNSMQLDHGVEPILDHY----TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           +G ++   +     V+  LD      T ++D   +     +AE + + +  K D   W V
Sbjct: 309 LGKQVHAQI-----VKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTV 362

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL-LANIYSSLGRWDDLRAVRELMS 735
           +++    +A     ++A +   ++  +   P    LA+  S   R   L + R+L S
Sbjct: 363 IVAG---YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHS 416



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 37/212 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ LH+  ++ G   D F+ + L+++Y+KC     A+ +FD +  +D  SWN I     
Sbjct: 410 SGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTI----- 464

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                     I    ++G   KAL  +  M +EG VP  +T   
Sbjct: 465 --------------------------ICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIG 498

Query: 126 VFKASTALLDVEHGRRCHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           V  A + +  +E G++    + KI G+   I     ++ +  + G         EEM   
Sbjct: 499 VLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLT 558

Query: 185 NEVTFTAMMSGLAKTDRVVE-----ALEMFRL 211
           + V     + G  K    +E     A+++F L
Sbjct: 559 SNVLIWETVLGACKMHGNIEFGERAAMKLFEL 590



 Score = 39.3 bits (90), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 23/103 (22%), Positives = 52/103 (50%)

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           L + +  +++  ++ K+G   D  + S+L+ +Y KC  +  ARQ  + M  ++   WN+ 
Sbjct: 2   LRAKYILKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQK 61

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           +          EAV+L+  M  + ++ +   F ++++A +  G
Sbjct: 62  LSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLG 104


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 203/596 (34%), Positives = 318/596 (53%), Gaps = 52/596 (8%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D N++  NALLS  A          +F  M E + V++ A+++G + T     +++++R 
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 212 MIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
           ++R+ +V    ++LS+++ V +           A SD        G  VHC  ++LGF A
Sbjct: 136 LLREESVRPTRITLSAMIMVAS-----------ALSDRAL-----GHSVHCQVLRLGFGA 179

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
              + + L+DMYAK G +  A  +F  +  ++VV +N +I G                  
Sbjct: 180 YAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGL----------------- 222

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                             +R   I+  + +F  M      +W  M++  +Q+    EA+ 
Sbjct: 223 ------------------LRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALD 264

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +FR M+  GV  D+ T   IL++C A+  LE GKQ+HA   +T    + +V S L+ +YS
Sbjct: 265 VFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYS 324

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC+   LAE VF R+   +I+ W +MI G   N+   EA   F +M+ + + P  F+  +
Sbjct: 325 KCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGS 384

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           V+SSCA L+S  +G Q H      G +  I V +AL+ +Y KCG I  A + FD M   +
Sbjct: 385 VISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHD 444

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+W  ++ GYAQ G   E + L++ M+A+G+KPD +TF+ +L+ACS +GLV+ G + F+
Sbjct: 445 QVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFD 504

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SMQ DHG+ PI DHYTCMID   R+G F EAE  I +MP   D   W  LLSSCRL  N+
Sbjct: 505 SMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNM 564

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + K AAE L   DP+N A Y LL +++++ G+W ++  +R  M +  + K+P  S
Sbjct: 565 EIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCS 620



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 252/551 (45%), Gaps = 91/551 (16%)

Query: 5   VAGKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           VAG + H  IL+  L    TFL N L+  Y+K      A+ +FD+MP  ++++ NA+LSA
Sbjct: 30  VAGAV-HCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSA 88

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHIT 122
              S  +    +LF  MPER+ VS+N LI+     G   +++ +Y  +  E  V PT IT
Sbjct: 89  LAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRIT 148

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L+++   ++AL D   G   H  V+++G     +V + L+ +YAK G  + A  VF+EM 
Sbjct: 149 LSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEME 208

Query: 183 -------------------------------EPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
                                          + + +T+T M++GL +    +EAL++FR 
Sbjct: 209 AKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRR 268

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M  + V ID  +  S+L  C       E                G+Q+H    +  +E +
Sbjct: 269 MRAEGVGIDQYTFGSILTACGALAALEE----------------GKQIHAYITRTWYEDN 312

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + + ++L+DMY+K   +  AE +F  +  R+++SW  MI GYGQ   S +A+     M+ 
Sbjct: 313 VFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQM 372

Query: 332 CGFEPDEVTSINMLVACV-----------------------------------RSGDIKT 356
            G +PD+ T  +++ +C                                    + G I+ 
Sbjct: 373 DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIED 432

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
              +FD M      SW A+++ Y+Q    KE I LF +M   G+KPD  T   +LS+C+ 
Sbjct: 433 AHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSR 492

Query: 417 MGILESGKQVHAASLKTASHI---DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVC 472
            G++E G     +  K    +   D+Y    +I +YS+  R + AE    ++P   D   
Sbjct: 493 AGLVEKGCDYFDSMQKDHGIVPIDDHYTC--MIDLYSRSGRFKEAEEFIKQMPHSPDAFG 550

Query: 473 WNSMIAGLSLN 483
           W ++++   L 
Sbjct: 551 WATLLSSCRLR 561



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 215/432 (49%), Gaps = 24/432 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +LR G     F+ + L+++Y+K      A+ +F +M  K +  +N +++   +
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A  LF  M +R+ ++W  +++ L +NGL+ +AL V+ +M  EG      T  S+
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  AL  +E G++ H  + +   + N++V +AL+ +Y+KC   + A  VF  M+  N 
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TAM+ G  +     EA+  F  M    +  D  +L SV+  CA              
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCA-------------- 390

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G Q HCL +  G    + +SN+L+ +Y K G ++ A  +F  +     VSW
Sbjct: 391 --NLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 448

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             ++ GY Q  ++ + I+L ++M + G +PD VT I +L AC R+G ++ G + FDSM  
Sbjct: 449 TALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQK 508

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  M+  YS+S   KEA +  ++M      PD    A +LSSC   G +E
Sbjct: 509 DHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPH---SPDAFGWATLLSSCRLRGNME 565

Query: 422 SGKQVHAASLKT 433
            GK      L+T
Sbjct: 566 IGKWAAENLLET 577



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 4/109 (3%)

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           F+ + L+  Y K G +  AR+ FD M   N  T N ++   A +    +  RL+    AS
Sbjct: 49  FLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLF----AS 104

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
             + D +++ A++T  S +G     V+++ ++  +  V P     + MI
Sbjct: 105 MPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153


>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
 gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
          Length = 681

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 230/778 (29%), Positives = 363/778 (46%), Gaps = 162/778 (20%)

Query: 7   GKLLHAHILRNGLFDDTF-LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK LH    + GL   T  L NRL+++Y++C +                           
Sbjct: 24  GKQLHILFFKKGLIQSTLSLANRLLQMYTRCGS--------------------------- 56

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               +  A+KLFDEMP RN  SWN +I   +++G +E+++ +++ MSN            
Sbjct: 57  ----MTDAHKLFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMMSN------------ 100

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                                      KN Y  N + S +AK G  + A  +F EM   N
Sbjct: 101 ---------------------------KNDYSWNVVFSGFAKAGEMEIARRLFNEMPNRN 133

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS---IDSVSLSSVLGVCAREG---CGVE 239
            V + +M+   A+     EA+ +F+ +    +     D+  L++V+G C   G   CG  
Sbjct: 134 GVVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQCG-- 191

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                            +Q+H   +    E D  L++SL+++Y K GD+DSA  + + + 
Sbjct: 192 -----------------KQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTME 234

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           E    S + +I GY                                      G +   R 
Sbjct: 235 EPDDFSLSALITGYANH-----------------------------------GRMNDARR 259

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
            F    +  V  WN+++S Y  +    EA  LF +MQ +G+K D +TLA ILS+C+++  
Sbjct: 260 AFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCN 319

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ-------------------------- 453
            + GKQ+HA + K     DN VAS  I  YSKC                           
Sbjct: 320 SQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITV 379

Query: 454 -----RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
                + E A+++F+ +P   ++ WNSMI GLS N   +EA   F  M + ++   +F+ 
Sbjct: 380 YSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNL 439

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
            +V+S+CA +SS   G Q+ A+    G  +D  + ++L++ YCKCG I   R+ FD M  
Sbjct: 440 TSVISACASISSLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMK 499

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            + ++WN M+ GYA NG+G EA+ L+ +M  +GV+P +ITF  +L+AC H GLV  G   
Sbjct: 500 SDEISWNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRW 559

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           FN MQ D+ ++P ++HY+CM+D   RAG   EA  LI  MP + D  +W  +L  C  H 
Sbjct: 560 FNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHG 619

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
              L ++ A+++  LDP+NS  Y  L++I+++ G W+    VR++M E  + K P YS
Sbjct: 620 EKDLGEKVAQQIIELDPENSGAYVQLSSIFATSGDWESSALVRKVMQERQVQKYPGYS 677



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 236/505 (46%), Gaps = 72/505 (14%)

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           F QS N       G+Q+H L  K G  ++ L L+N LL MY + G M  A  +F  +P R
Sbjct: 11  FLQSLNTPHSIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHR 70

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
           +  SWN MI GY +     ++I L   M +     ++ +   +     ++G+++  R +F
Sbjct: 71  NCFSWNTMIEGYMKSGNKERSIRLFDMMSN----KNDYSWNVVFSGFAKAGEMEIARRLF 126

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP---DRTTLAIILSSCAAMG 418
           + MP+ +   WN+M+ SY+++ + +EA++LF+E+    +     D   LA ++ +C  +G
Sbjct: 127 NEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLG 186

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKC-------------------------- 452
            ++ GKQ+HA  L     +D+ + S LI +Y KC                          
Sbjct: 187 EIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALIT 246

Query: 453 -----QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
                 R   A R F+R     +V WNS+I+G   N+ +IEAF+ F  M++  +     +
Sbjct: 247 GYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFST 306

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD------------ 555
            AT+LS+C+ L +S  G+Q+HA   K G + D  V SA I+ Y KCG             
Sbjct: 307 LATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELK 366

Query: 556 -------------------IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
                              I  A+Q F+ M  K+ ++WN MI G +QNG   EA+ L+  
Sbjct: 367 TYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCM 426

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M    ++ +     ++++AC+    +++G +IF    +  G++      T ++D   + G
Sbjct: 427 MNKLDLRMNRFNLTSVISACASISSLELGEQIFARATV-VGLDSDEVISTSLVDFYCKCG 485

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLL 681
                  L D M  K D + W  +L
Sbjct: 486 FIEIGRKLFDTMM-KSDEISWNSML 509


>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
 gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
          Length = 703

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 225/750 (30%), Positives = 383/750 (51%), Gaps = 90/750 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HAHI+ +GL  D FL + L+++Y KC +                            
Sbjct: 5   GRRIHAHIVASGLASDGFLGDHLLQMYGKCGSV--------------------------- 37

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            DD   A ++F  +P R++ SWN +I+A  +N    KA+ ++  M + G  P   TL+SV
Sbjct: 38  -DD---AIQVFHSLPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSV 93

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++L D+E G++ H   +  GL  +I V NAL+S+YA+C     A  VF+++   + 
Sbjct: 94  LGACSSLRDLEEGKKIHSRALARGLSSSIIVQNALVSMYARCSRLDVARVVFDKIESKSV 153

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ AM++  A+     +AL++F+   R  +  + V+ +SV   C+              
Sbjct: 154 VSWNAMIAACARQGEAEQALQLFK---RMELEPNEVTFASVFNACS-----------LLP 199

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D+   R V G+++H        EA++ ++ +++ MY K G +  A  +F+ +  ++VVSW
Sbjct: 200 DH---REV-GKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSW 255

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI------------------------ 342
           N M+  Y Q     +A+E+   M +   + DEVT +                        
Sbjct: 256 NAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVA 315

Query: 343 ----------NMLVACV-RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                     N L++   +  ++   R +F  + +  V SW A++ +Y+Q   ++EA++L
Sbjct: 316 HGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALEL 375

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL-KTASHIDNYVASGLIGIYS 450
           +++M+  G++PD+ T   +LS+C+    LE G+ +HA  L +     D  + + LI +Y 
Sbjct: 376 YKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVLVAALINMYV 435

Query: 451 KCQRNELAERVFHRIPELD-IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           KC R +L+  +F    +   +V WN+MI           A   +  M+Q  + P + + +
Sbjct: 436 KCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLS 495

Query: 510 TVLSSCAKLSSSFQGRQVHAQI--EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           ++LS+CA+L    +G Q+H +I   +D   N + + +ALI MY  CG+I  A+  F  M 
Sbjct: 496 SILSACAELQDLEKGEQLHVEIIASRDCSQNPVVL-NALISMYASCGEIREAKAVFKRMK 554

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ V+W  +I  Y Q G    A+RLY+ M+  GV+P + TF+ +  AC H+GLVD    
Sbjct: 555 NRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTFLCVFLACGHAGLVDECKW 614

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F SM  D  + P  DHY+C++  L RAG   EAE L+  MP     V W  LL +CR H
Sbjct: 615 YFQSMIEDR-ITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGACRTH 673

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
            +++ A+RAA+E   LD ++SAPY LL+N+
Sbjct: 674 GDLKRARRAADEAMELDRQDSAPYVLLSNV 703



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 257/534 (48%), Gaps = 61/534 (11%)

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+++H   +  G  +D  L + LL MY K G +D A  +F +LP RS+ SWN +IA + 
Sbjct: 4   QGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFA 63

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-------------- 360
           +     KAIE+ + M S G +PD  T  ++L AC    D++ G+++              
Sbjct: 64  KNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSII 123

Query: 361 ---------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                                FD + S SV SWNAM+++ ++    ++A++LF+ M+   
Sbjct: 124 VQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRMEL-- 181

Query: 400 VKPDRTTLAIILSSCAAM-GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
            +P+  T A + ++C+ +    E GK++H     +    +  VA+ ++ +Y K  +  +A
Sbjct: 182 -EPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMA 240

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            +VF+ I   ++V WN+M+   + N+LD EA   + +M   ++   + +    L   A L
Sbjct: 241 RQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASL 300

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
                G ++H      GY ++I V +ALI MY KC ++  AR+ F  +   + V+W  +I
Sbjct: 301 RLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALI 360

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM--QLDH 636
             Y Q+G   EA+ LYK M   G++PD +TF ++L+ACS++  +++G  +   +  + D 
Sbjct: 361 VAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDG 420

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP--VIWEVLLSSCRLHANVRLAK 694
             + +L     +I+   + G    +  +     CKD    V+W  ++++           
Sbjct: 421 FSDGVL--VAALINMYVKCGRLDLSSEIFQ--SCKDTKAVVVWNAMITAYEQEGY----S 472

Query: 695 RAAEELFR------LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           RAA +L+       LDP  S     L++I S+     DL    +L  E    +D
Sbjct: 473 RAAVDLYDMMKQRGLDPDEST----LSSILSACAELQDLEKGEQLHVEIIASRD 522



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 138/268 (51%), Gaps = 12/268 (4%)

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L  G+++HA  + +    D ++   L+ +Y KC   + A +VFH +P   +  WN +IA 
Sbjct: 2   LPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAA 61

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
            + N    +A   F+ M    + P   + ++VL +C+ L    +G+++H++    G  + 
Sbjct: 62  FAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSS 121

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           I V +AL+ MY +C  +  AR  FD +  K+ V+WN MI   A+ G  ++A++L+K M  
Sbjct: 122 IIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM-- 179

Query: 600 SGVKPDDITFVAILTACS----HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
             ++P+++TF ++  ACS    H    +VG  I + ++  H +E  +   T ++   G+ 
Sbjct: 180 -ELEPNEVTFASVFNACSLLPDHR---EVGKRIHDRIRGSH-LEANVTVATAIVTMYGKF 234

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           G    A  + + +  K + V W  +L +
Sbjct: 235 GKVGMARQVFNGIQHK-NVVSWNAMLGA 261


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 224/702 (31%), Positives = 358/702 (50%), Gaps = 57/702 (8%)

Query: 83  RNVVSWNNLISA--LVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           R    WN LI A  +  NG  +     YN+M   G      T   V K  +   D+  G 
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTFD-GFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGM 179

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
             HG+V K+G D ++YV N LL LY  CG+   A  +F+EM E + V++  ++  L+   
Sbjct: 180 EVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNG 239

Query: 201 RVVEALEM-FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
              EA    F +++R  +  + VS+ S+L + A           A  D + +R     ++
Sbjct: 240 DYTEARNYYFWMILRSVIKPNLVSVISLLPISA-----------ALEDEEMTR-----RI 283

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           HC ++K+G ++ +   N+L+D Y K G + +   +F+   E++ VSWN +I G   K + 
Sbjct: 284 HCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRC 343

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------------------- 360
             A+   + M   G +P+ VT  ++L   V     K G+E+                   
Sbjct: 344 WDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSL 403

Query: 361 ----------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
                           F ++   ++ SWNAM+++Y+ +    EAI+   +MQ  G  P+ 
Sbjct: 404 IDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNA 463

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
            T   +L +CA +G L  GK++HA  ++     D +V++ LI +Y+KC     A  VF+ 
Sbjct: 464 VTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN- 522

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
               D V +N +I G S     +++   F +MR     P   SF  V+S+CA L++  QG
Sbjct: 523 TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQG 582

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           ++VH    ++   + +FV ++L++ Y KCG I  A + F+ +  K+  +WN MI GY   
Sbjct: 583 KEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMI 642

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G  + A+ +++ M    V+ D ++++A+L+ACSH GLV+ G + F+ M L   +EP   H
Sbjct: 643 GELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEM-LAQRLEPTEMH 701

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           YTCM+D LGRAG   EA  LI ++P   D  IW  LL +CR++ NV L +RAAE LF L 
Sbjct: 702 YTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELK 761

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           P++   Y LL+NIY+  GRWD+   +RELM      K+P  S
Sbjct: 762 PQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCS 803



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 197/685 (28%), Positives = 318/685 (46%), Gaps = 115/685 (16%)

Query: 1   KKAHVAGKLLHAH-ILRNGLFDDTFLCNRLI-------------------ELYSKCNNTH 40
           + A +   L+ AH I  NG FD     NR++                   + +  C    
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGME 180

Query: 41  SAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGL 100
               +F      D+Y  N +L        L  A +LFDEMPER+VVSWN +I  L  NG 
Sbjct: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGD 240

Query: 101 EEKALSVYNKMSNEGFV-PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVAN 159
             +A + Y  M     + P  +++ S+   S AL D E  RR H   +K+GLD  +   N
Sbjct: 241 YTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCN 300

Query: 160 ALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           AL+  Y KCG  K    VF E  E NEV++ ++++GLA   R  +AL  FR+MI      
Sbjct: 301 ALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQP 360

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           +SV++SS+L V       VE + F            G+++H  ++++G E D+ ++NSL+
Sbjct: 361 NSVTISSILPVL------VELECFKA----------GKEIHGFSMRMGTETDIFIANSLI 404

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
           DMYAK+G    A  IF NL  R++VSWN MIA Y       +AI  + +M+  G  P+ V
Sbjct: 405 DMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAV 464

Query: 340 TSINMLVACVRSGDIKTGREM-----------------------------------FDSM 364
           T  N+L AC R G +  G+E+                                   F++ 
Sbjct: 465 TFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTS 524

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
               V S+N ++  YS++++  +++ LF EM+  G KPD  +   ++S+CA +  L+ GK
Sbjct: 525 RKDEV-SYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGK 583

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           +VH  +L+   +   +V++ L+  Y+KC R ++A R+F++I   D+  WN+MI G  +  
Sbjct: 584 EVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIG 643

Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
               A   F+ MR + +     S+  VLS+C+           H  + + G+        
Sbjct: 644 ELETAISMFEAMRDDTVQYDLVSYIAVLSACS-----------HGGLVERGW-------- 684

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGK----NTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
                           Q+F  M  +      + +  M+    + G+ +EA +L + +   
Sbjct: 685 ----------------QYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQL--- 725

Query: 601 GVKPDDITFVAILTACSHSGLVDVG 625
            + PD   + A+L AC   G V++G
Sbjct: 726 PIAPDANIWGALLGACRIYGNVELG 750



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/561 (27%), Positives = 268/561 (47%), Gaps = 71/561 (12%)

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVF 178
           HI L ++     +LL     ++ H L I  G L +++ +  +L+  YAK         +F
Sbjct: 57  HINLLTLCSKVQSLLQT---KQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLF 113

Query: 179 EEMSEPNEVTF---TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            +  +     F   T + +     +   +  E +  M+R+ V +D  +   VL +C    
Sbjct: 114 NQTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLC---- 169

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
               SD F            G +VH +  KLGF+ D+++ N+LL +Y   G ++ A  +F
Sbjct: 170 ----SDSFDICK--------GMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLF 217

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKA--------------------IELLQRMKSCGFE 335
             +PER VVSWN +I         T+A                    I LL    S   E
Sbjct: 218 DEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP--ISAALE 275

Query: 336 PDE-----------------VTSINMLV-ACVRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
            +E                 VT+ N LV A  + G +K   ++F+     +  SWN++++
Sbjct: 276 DEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIIN 335

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
             +      +A+  FR M   G +P+  T++ IL     +   ++GK++H  S++  +  
Sbjct: 336 GLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTET 395

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D ++A+ LI +Y+K   +  A  +FH +   +IV WN+MIA  +LN L +EA  F  QM+
Sbjct: 396 DIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQ 455

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           +    P   +F  VL +CA+L     G+++HA   + G  +D+FV ++LI+MY KCG ++
Sbjct: 456 ETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLH 515

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            AR  F+    K+ V++N +I GY++     +++ L+ +M   G KPD ++FV +++AC+
Sbjct: 516 SARNVFNTSR-KDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACA 574

Query: 618 HSGLVDVGVEIFNSMQLDHGV 638
           +   +  G E+       HGV
Sbjct: 575 NLAALKQGKEV-------HGV 588



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 213/462 (46%), Gaps = 60/462 (12%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AGK +H   +R G   D F+ N LI++Y+K  + HS +                      
Sbjct: 380 AGKEIHGFSMRMGTETDIFIANSLIDMYAK--SGHSTE---------------------- 415

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                  A  +F  +  RN+VSWN +I+    N L  +A+    +M   G  P  +T  +
Sbjct: 416 -------ASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTN 468

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   L  +  G+  H + ++IGL  +++V+N+L+ +YAKCG    A  VF   S  +
Sbjct: 469 VLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKD 527

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           EV++  ++ G ++TD  +++L +F  M       D VS   V+  CA             
Sbjct: 528 EVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACA------------- 574

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +    G++VH + ++    + L +SNSLLD Y K G +D A  +F+ +  + V S
Sbjct: 575 ---NLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVAS 631

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI GYG   +   AI + + M+    + D V+ I +L AC   G ++ G + F  M 
Sbjct: 632 WNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEML 691

Query: 366 S----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           +    P+   +  M+    ++   +EA KL +++    + PD      +L +C   G +E
Sbjct: 692 AQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLP---IAPDANIWGALLGACRIYGNVE 748

Query: 422 SGKQV--HAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            G++   H   LK   H   Y+   L  IY++  R + A ++
Sbjct: 749 LGRRAAEHLFELK-PQHCGYYIL--LSNIYAETGRWDEANKI 787



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 8/176 (4%)

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQFFD--MMH 567
           +L+ C+K+ S  Q +QVHA    +G++   + + ++LI  Y K          F+    +
Sbjct: 60  LLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQN 119

Query: 568 GKNTVTWNEMI--HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
            +    WN +I  H  A NG  D     Y  M+  GV+ DD TF  +L  CS S  +  G
Sbjct: 120 CRTAFLWNTLIRAHSIAWNGTFD-GFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKG 178

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           +E+ + +    G +  +     ++   G  G  ++A  L DEMP + D V W  ++
Sbjct: 179 MEV-HGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMP-ERDVVSWNTII 232


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 217/701 (30%), Positives = 352/701 (50%), Gaps = 59/701 (8%)

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGF-VPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           N +I     +G  E A+ VY      GF V        + KA   L DV  G++ HG ++
Sbjct: 7   NRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLL 66

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
           K G  ++I+V N+LL +Y KCG   +AV +FE M E + V++  M+SG  ++   V++L 
Sbjct: 67  KFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLV 126

Query: 208 MFRLMIRKAVSI--DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           MFR M+++      + V+  + L  CA   C                  HG ++H   +K
Sbjct: 127 MFRRMVKECGGSYHNRVACLAALSSCASIKC----------------LTHGLEIHGFLVK 170

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE-----RSVVSWNVMIAGYGQKYQST 320
            G ++D  L ++L++MY K GD+ +AE +F  + +     R++  WNVMI GY      +
Sbjct: 171 KGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLS 230

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVAC-------------------------------- 348
            A+EL   M   G  PD  T + +LV C                                
Sbjct: 231 LALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALM 290

Query: 349 ---VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
               + GD +T  ++F    + ++  W +++ + +Q+    EA++ F E       PD  
Sbjct: 291 EMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPV 350

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
            L   L +C+ + +   G  +H  ++K     D +V   L+  Y KC   E A++VF+ +
Sbjct: 351 ILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGL 410

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
              D+V WN++I+G + N    EA   F+ M+  ++ P   + A +LS C  LS     +
Sbjct: 411 STRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCK 470

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           +VH  + +  +  +  V ++LI  Y KCGDI+ +R  F+ +  +N VTWN ++ G+  +G
Sbjct: 471 EVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHG 530

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
             DE    ++ M  + +KPD  TF ++L++CSHSG VD G + FNSM  D+ +EP ++ Y
Sbjct: 531 RTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQY 590

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
           TCM+D LGRAG+ ++A  LI  MPC  D  IW  LL+SC+ H N +LA+  A  +F LD 
Sbjct: 591 TCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDA 650

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +     LLAN+Y   G  +++  VR  + +  + K P  S
Sbjct: 651 SSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCS 691



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 147/551 (26%), Positives = 260/551 (47%), Gaps = 87/551 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H H+L+ G   D F+ N L+ +Y KC    +A  +F++M  +D  SWN ++S  C+
Sbjct: 58  GKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQ 117

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S D   +  +F  M +    S++N ++ L        ALS                    
Sbjct: 118 SGDYVKSLVMFRRMVKECGGSYHNRVACLA-------ALS-------------------- 150

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE-----EM 181
             +  ++  + HG   HG ++K G+D + ++ +AL+ +Y KCG  K+A  VFE     E+
Sbjct: 151 --SCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNEL 208

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              N   +  M+ G    + +  ALE+F  M+   +S DS ++  VL +C+         
Sbjct: 209 VGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCS--------- 259

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                  +      G+Q+H L + LG + D+ +  +L++MY K GD +++  IF      
Sbjct: 260 -------QLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNH 312

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQR-MKSCGFEPDEVTSINMLVACV----------- 349
           ++V W  ++    Q     +A+E     M  CGF PD V  +  L AC            
Sbjct: 313 NLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGF-PDPVILLAALRACSFLSLKPRGMAI 371

Query: 350 ------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + GD++  +++F  + +  + SWNA++S ++Q++  
Sbjct: 372 HGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCA 431

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            EA+K FR+MQ + +KP+  T+A ILS C  + ++   K+VH   L+     +  V + L
Sbjct: 432 DEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSL 491

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I  Y+KC     +  VF ++P  + V WNS++ G  ++    E F  F++M++  + P  
Sbjct: 492 ISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDH 551

Query: 506 FSFATVLSSCA 516
            +F ++LSSC+
Sbjct: 552 GTFTSLLSSCS 562



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 208/457 (45%), Gaps = 77/457 (16%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K    G  +H  +++ G+  D FL + LIE+Y KC +  +A+++F+++  +D        
Sbjct: 156 KCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERI--RD-------- 205

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                           +E+  RN+  WN +I   V N     AL ++ +M   G  P   
Sbjct: 206 ----------------NELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSS 249

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+  V    + LLD+  G++ HGL++ +GLD ++ V  AL+ +Y KCG  + ++ +F+  
Sbjct: 250 TVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRS 309

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              N V + ++M   A+     EALE F   +      D V L + L  C+         
Sbjct: 310 QNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSF-------- 361

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    S    G  +H   IK+GF++D+ +  +L+D Y K GDM+ A+ +F  L  R
Sbjct: 362 --------LSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTR 413

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------ 349
            +VSWN +I+G+ Q   + +A++  + M+S   +P+ VT   +L  C             
Sbjct: 414 DLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVH 473

Query: 350 -----------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + GDI + R +F+ +P  +  +WN++L  +       
Sbjct: 474 CYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTD 533

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           E    F +M+   +KPD  T   +LSSC+  G +++G
Sbjct: 534 EMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAG 570



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 191/417 (45%), Gaps = 55/417 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  IL  GL DD  +   L+E+Y KC                              
Sbjct: 267 GKQIHGLILGLGLDDDVRVGTALMEMYFKCG----------------------------- 297

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D E + ++F      N+V W +++    +NG   +AL  +++   +   P  + L + 
Sbjct: 298 --DPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAA 355

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A + L     G   HG  IK+G D +++V  AL+  Y KCG  ++A  VF  +S  + 
Sbjct: 356 LRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDL 415

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A++SG A+     EAL+ FR M  K +  ++V+++ +L VC               
Sbjct: 416 VSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTH------------- 462

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S  +  ++VHC  ++  FE +  ++NSL+  YAK GD+ S+  +F  LP R+ V+W
Sbjct: 463 ---LSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTW 519

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N ++ G+G   ++ +     ++MK    +PD  T  ++L +C  SG +  G + F+SM  
Sbjct: 520 NSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMME 579

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
                P V  +  M+    ++ N  +A  L   M      PD      +L+SC   G
Sbjct: 580 DYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMP---CSPDDRIWGSLLASCKNHG 633


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 229/780 (29%), Positives = 378/780 (48%), Gaps = 94/780 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA I+  GL ++  L N L+ LY KC +    + +F ++  +D             
Sbjct: 48  GRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRD------------- 92

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                               SW  +I+A   +G  ++A+ ++++M  EG     +T  +V
Sbjct: 93  ------------------EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAV 134

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L D+  GR  H  +++ GL+    +AN LL +Y  CG    A+ +FE M E + 
Sbjct: 135 LKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDL 193

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A ++  A++  +  ALE+F+ M  + V    ++L   L VCA+             
Sbjct: 194 VSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAK------------- 240

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                     + +H +  + G E  L +S +L   YA+ G +D A+ +F    ER VVSW
Sbjct: 241 ------IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSW 294

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN------------MLVAC------ 348
           N M+  Y Q    ++A  L  RM   G  P +VT +N            M+ AC      
Sbjct: 295 NAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHACALEKGL 354

Query: 349 --------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          R G  +  R +F+ +P  +VS WN M++  SQ    K A++LF+ 
Sbjct: 355 DRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNAVS-WNTMIAGSSQKGQMKRALELFQR 413

Query: 395 MQFRGVKPDRTTLAIILSSCAA----MGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           MQ  G+ P R T   +L + A+       +  G+++H+  +      +  + + ++ +Y+
Sbjct: 414 MQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYA 473

Query: 451 KCQRNELAERVFHRIP---ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
            C   + A   F R       D+V WN++I+ LS +     A  FF++M  + + P Q +
Sbjct: 474 SCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQIT 533

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              VL +CA  ++  +G  VH  +   G  +++FV +AL  MY +CG +  AR+ F+ + 
Sbjct: 534 CVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVA 593

Query: 568 -GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++ V +N MI  Y+QNG   EA++L+  M   G +PD+ +FV++L+ACSH GL D G 
Sbjct: 594 VERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGW 653

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           EIF SM+  +G+ P  DHY C +D LGRAG   +AE LI  M  K   ++W+ LL +CR 
Sbjct: 654 EIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRK 713

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + +V   + A   +  LDP + + Y +L+NI +  G+WD+   VR  M    + K    S
Sbjct: 714 YRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKS 773



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 174/632 (27%), Positives = 298/632 (47%), Gaps = 68/632 (10%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P H  L  + +A+     +  GRR H  ++ +GL++ +   N LL LY KC        V
Sbjct: 29  PAH--LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEV 84

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  +   +E ++T +++   +  +   A+ MF  M ++ V  D+V+  +VL  CAR G  
Sbjct: 85  FSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLG-- 142

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
              D+             G+ +H   ++ G E    L+N LL +Y   G + SA ++F  
Sbjct: 143 ---DL-----------SQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFER 188

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
           + ER +VSWN  IA   Q      A+EL QRM+  G  P  +T +  L  C         
Sbjct: 189 M-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQARAI 247

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   R G +   +E+FD      V SWNAML +Y+Q  + 
Sbjct: 248 HSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHM 307

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            EA  LF  M   G+ P + TL    + C++   L  G+ +HA +L+     D  + + L
Sbjct: 308 SEAALLFARMLHEGIPPSKVTLVNASTGCSS---LRFGRMIHACALEKGLDRDIVLGNAL 364

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y++C   E A  +F  IP  + V WN+MIAG S       A   F++M+   M P +
Sbjct: 365 LDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVR 423

Query: 506 FSFATVLSSCA----KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            ++  +L + A    +  +  +GR++H++I   GY ++  +G+A+++MY  CG I  A  
Sbjct: 424 ATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAA 483

Query: 562 FFD---MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
            F    M    + V+WN +I   +Q+G+G  A+  ++ M   GV P+ IT VA+L AC+ 
Sbjct: 484 SFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAG 543

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
           +  +  GV + + ++   G+E  +   T +    GR G    A  + +++  + D VI+ 
Sbjct: 544 AAALTEGVIVHDHLR-HSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFN 602

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            ++++   ++   LA  A +  +R+  + S P
Sbjct: 603 AMIAA---YSQNGLAGEALKLFWRMQQEGSRP 631


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 225/733 (30%), Positives = 362/733 (49%), Gaps = 55/733 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPER---NVVSWNNLISALVRNGLEEKALSVYN 109
           D  + NA+++   K  D E AY +F  M  R   ++VSWN +ISA V  G    A++++ 
Sbjct: 264 DPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFR 323

Query: 110 KMSNEGFVPTHITLASVFKASTAL-LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC 168
           ++  EG  P  +TL ++  A  A  +D    R+ HG + + G  +++ V NA++S+YAKC
Sbjct: 324 RLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKC 383

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR--VVEALEMFRLMIRKAVSIDSVSLSS 226
           G+   A  VF  +    +V     M G A  DR    + +  F  M+   +  + VS  +
Sbjct: 384 GFFSAAWTVFRRIRWKCDVISWNTMLG-ASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIA 442

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           +L  C+       S+        F R +H      LT +  +  +  ++  L+ MY K G
Sbjct: 443 ILNACS------NSEAL-----DFGRKIHSL---ILTRRRDY-VESSVATMLVSMYGKCG 487

Query: 287 DMDSAEVIFSN--LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
            +  AE++F    LP RS+V+WNVM+  Y Q  +S +A   L  M   G  PD ++  ++
Sbjct: 488 SIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSV 547

Query: 345 LVACV-------------------------------RSGDIKTGREMFDSMPSPSVSSWN 373
           L +C                                R  +++  R +FD M    V SW 
Sbjct: 548 LSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFDEMDHGDVVSWT 607

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           AM+S+ +++ + KE   LFR MQ  GV PD+ TLA  L +C     L  GK +HA   + 
Sbjct: 608 AMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEI 667

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               D  V + L+ +YS C     A   F  +   D+V WN M A  +   L  EA + F
Sbjct: 668 GLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLF 727

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
           + M+   + P + +F+T L+     +    G+  H    + G  +D+ V + L+++Y KC
Sbjct: 728 RHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKC 787

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +  A   F        V  N +I   AQ+G+ +EAV+++  M   GV+PD  T V+I+
Sbjct: 788 GKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSII 847

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
           +AC H+G+V+ G   F +M+   G+ P L+HY C +D LGRAG    AE +I +MP +D+
Sbjct: 848 SACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDN 907

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
            ++W  LL +C+L  +  L +R A+ +  LDP NSA + +L+NIY + G+W D    R+ 
Sbjct: 908 TLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKK 967

Query: 734 MSENCIVKDPAYS 746
           + +  +   P  S
Sbjct: 968 LLDQNVKNAPGMS 980



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 200/746 (26%), Positives = 332/746 (44%), Gaps = 111/746 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  H  I   GL    FL N LI +Y +C +                            
Sbjct: 44  GKRAHELIANAGLEQHLFLGNCLINMYVRCGS---------------------------- 75

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLAS 125
              LE A+ +F +M ERNVVSW  LISA  ++G   +A +++  M  E    P   TL +
Sbjct: 76  ---LEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVA 132

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKN----IYVANALLSLYAKCGWTKHAVPVFEEM 181
           +  A     D+  GR  H ++ ++GL++       V NA++++YAKCG  + A+ VF  +
Sbjct: 133 MLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTI 192

Query: 182 SEPNEVTFTAMMSGLAKTDRVV-EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            E + V++TAM    A+  R   +AL +FR M+ + ++ + ++  + LG C         
Sbjct: 193 PEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC--------- 243

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                     +    G  +H L  + G   D    N+L++MY K GD + A  +F  +  
Sbjct: 244 ----------TSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMAS 293

Query: 301 RS---VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG----- 352
           R    +VSWN MI+   +  +   A+ + +R++  G  P+ VT I +L A   SG     
Sbjct: 294 RQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGA 353

Query: 353 ---------------DIKTGREMFDSMPSP------------------SVSSWNAMLSSY 379
                          D+  G  +  SM +                    V SWN ML + 
Sbjct: 354 ARKFHGRIWESGYLRDVVVGNAII-SMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGAS 412

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL-KTASHID 438
              ++  + +  F  M   G+ P++ +   IL++C+    L+ G+++H+  L +   +++
Sbjct: 413 EDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVE 472

Query: 439 NYVASGLIGIYSKCQRNELAERVFHR--IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
           + VA+ L+ +Y KC     AE VF    +P   +V WN M+   + N    EAF    +M
Sbjct: 473 SSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEM 532

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
            Q  + P   SF +VLSSC     S + + +   I + GY     + +ALI M+ +C ++
Sbjct: 533 LQGGVLPDALSFTSVLSSC---YCSQEAQVLRMCILESGY-RSACLETALISMHGRCREL 588

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             AR  FD M   + V+W  M+   A+N    E   L++ M   GV PD  T    L  C
Sbjct: 589 EQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTC 648

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
             S  + +G +I ++   + G+E  +     +++     G + EA    + M  + D V 
Sbjct: 649 LDSTTLGLG-KIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR-DLVS 706

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFR 702
           W ++ ++   +A   LAK A   LFR
Sbjct: 707 WNIMSAA---YAQAGLAKEAV-LLFR 728



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 164/601 (27%), Positives = 286/601 (47%), Gaps = 80/601 (13%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D+  G+R H L+   GL++++++ N L+++Y +CG  + A  +F +M E N V++TA++S
Sbjct: 40  DLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALIS 99

Query: 195 GLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
             A++     A  +FR M +  + + +S +L ++L  CA                  SR+
Sbjct: 100 ANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACAN-----------------SRD 142

Query: 254 VH-GQQVHCLTIKLGFEAD----LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
           +  G+ +H +  +LG E +      + N++++MYAK G  + A  +F  +PE+ VVSW  
Sbjct: 143 LAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTA 202

Query: 309 MIAGYGQKYQ-STKAIELLQRMKSCGFEPDEVTSINMLVACV------------------ 349
           M   Y Q+ +    A+ + + M      P+ +T I  L AC                   
Sbjct: 203 MAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLG 262

Query: 350 --------------RSGDIKTGREMFDSMPSPS---VSSWNAMLSSYSQSENHKEAIKLF 392
                         + GD +    +F +M S     + SWNAM+S+  ++  H +A+ +F
Sbjct: 263 FDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIF 322

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGI-LESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           R ++  G++P+  TL  IL++ AA G+   + ++ H    ++    D  V + +I +Y+K
Sbjct: 323 RRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAK 382

Query: 452 CQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFM----FFKQMRQNEMYPTQF 506
           C     A  VF RI  + D++ WN+M+      S D ++F      F  M    + P + 
Sbjct: 383 CGFFSAAWTVFRRIRWKCDVISWNTMLGA----SEDRKSFGKVVNTFHHMLLAGIDPNKV 438

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQI--EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           SF  +L++C+   +   GR++H+ I   +  YV    V + L+ MY KCG I  A   F 
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTRRRDYVES-SVATMLVSMYGKCGSIAEAELVFK 497

Query: 565 MM--HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
            M    ++ VTWN M+  YAQN    EA     +M+  GV PD ++F ++L++C  S   
Sbjct: 498 EMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ-- 555

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
               ++     L+ G        T +I   GR     +A  + DEM    D V W  ++S
Sbjct: 556 --EAQVLRMCILESGYRSACLE-TALISMHGRCRELEQARSVFDEMD-HGDVVSWTAMVS 611

Query: 683 S 683
           +
Sbjct: 612 A 612



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 195/434 (44%), Gaps = 56/434 (12%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           ++L   IL +G +    L   LI ++ +C     A+ +FD+M H D+ SW A++SA  ++
Sbjct: 558 QVLRMCILESG-YRSACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAEN 616

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            D +  + LF                                +M  EG +P   TLA+  
Sbjct: 617 RDFKEVHHLF-------------------------------RRMQLEGVIPDKFTLATTL 645

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
                   +  G+  H  V +IGL+ +I V NALL++Y+ CG  + A+  FE M   + V
Sbjct: 646 DTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLV 705

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++  M +  A+     EA+ +FR M  + V  D ++ S+ L V    G  + SD      
Sbjct: 706 SWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSG--GSALVSD------ 757

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G+  H L  + G ++D+ ++  L+ +YAK G +D A  +F    + +VV  N
Sbjct: 758 --------GKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLN 809

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
            +I    Q   S +A+++  +M+  G  PD  T ++++ AC  +G ++ G   F +M   
Sbjct: 810 AIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEY 869

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
              SP++  +   +    ++   + A ++ R+M F       T+L   L +C   G  E 
Sbjct: 870 FGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSL---LGTCKLQGDAEL 926

Query: 423 GKQVHAASLKTASH 436
           G++     L+   H
Sbjct: 927 GERCAQRILELDPH 940



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 28/290 (9%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L SC     L  GK+ H            ++ + LI +Y +C   E A  +F ++ E +
Sbjct: 31  LLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERN 90

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           +V W ++I+  + +     AF  F+ M  ++   P  ++   +L++CA       GR +H
Sbjct: 91  VVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIH 150

Query: 529 AQIEKDGY----VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ- 583
           A I + G          VG+A+I MY KCG    A   F  +  K+ V+W  M   YAQ 
Sbjct: 151 AMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQE 210

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACS--------HSGLVDVGVEIFNSMQLD 635
             +  +A+R++++M+   + P+ ITF+  L AC+        HS L + G+         
Sbjct: 211 RRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGL--------- 261

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD--DPVIWEVLLSS 683
            G +P+  +   +I+  G+ G +  A  +   M  +   D V W  ++S+
Sbjct: 262 -GFDPLAGN--ALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISA 308



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 132/308 (42%), Gaps = 51/308 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++HA +   GL  D  + N L+ +YS C +   A   F+ M  +D+ SWN I+SA   
Sbjct: 657 GKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWN-IMSA--- 712

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                      A  + GL ++A+ ++  M  EG  P  +T ++ 
Sbjct: 713 ---------------------------AYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTT 745

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              S     V  G+  HGL  + GLD ++ VA  L+ LYAKCG    A+ +F    +   
Sbjct: 746 LNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTV 805

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V   A++  LA+     EA++MF  M ++ V  D  +L S++  C   G      +  + 
Sbjct: 806 VLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAG------MVEEG 859

Query: 247 DNKFSRNVHGQQVHCLTIK--LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSV 303
            + F           LT+K   G    L      +D+  + G ++ AE I   +P E + 
Sbjct: 860 CSSF-----------LTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNT 908

Query: 304 VSWNVMIA 311
           + W  ++ 
Sbjct: 909 LVWTSLLG 916



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 6/170 (3%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +  +L SC   +   +G++ H  I   G    +F+G+ LI MY +CG +  A   F  M 
Sbjct: 28  YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVDVGV 626
            +N V+W  +I   AQ+G    A  L++ M + S   P+  T VA+L AC++S  + +G 
Sbjct: 88  ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 627 EIFNSMQLDHGVEPILDHYT----CMIDCLGRAGHFHEAEMLIDEMPCKD 672
            I ++M  + G+E      T     MI+   + G   +A  +   +P KD
Sbjct: 148 SI-HAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKD 196


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 242/859 (28%), Positives = 394/859 (45%), Gaps = 171/859 (19%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            GK  HA IL +G   D FL N LI +YS                             +C 
Sbjct: 645  GKRAHARILTSGHHPDRFLTNNLITMYS-----------------------------KCG 675

Query: 67   SDDLEFAYKLFDEMPE--RNVVSWNNLISA---LVRNGLEEKALSVYNKMSNEGFVPTHI 121
            S  L  A KLFD  P+  R++V+WN ++SA     R+G       ++  +       T  
Sbjct: 676  S--LSSARKLFDTTPDTSRDLVTWNAILSAHADKARDGFH-----LFRLLRRSFVSATRH 728

Query: 122  TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVA----------------------- 158
            TLA VFK              HG  +KIGL  +++VA                       
Sbjct: 729  TLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGM 788

Query: 159  --------NALLSLYAKCGWTKHAVPVFEEMSE----PNEVTFTAM-------------- 192
                    N ++  Y   G    A+ +F E +     P++VT   +              
Sbjct: 789  GLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQ 848

Query: 193  -----------------------------MSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
                                         +S   +     EA++ F  MI   V+ D ++
Sbjct: 849  LKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLT 908

Query: 224  LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
               +L V A   C +E                G+Q+H + ++ G +  + + N L++MY 
Sbjct: 909  FVVMLSVVAGLNC-LEL---------------GKQIHGIVVRSGLDQVVSVGNCLINMYV 952

Query: 284  KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
            K G +  A  +F  + E  +VSWN MI+G         ++ +   +   G  PD+ T  +
Sbjct: 953  KTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVAS 1012

Query: 344  MLVACV------------------------------------RSGDIKTGREMFDSMPSP 367
            +L AC                                     +SG ++    +F +    
Sbjct: 1013 VLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGF 1072

Query: 368  SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
             ++SWNAM+  Y  S +  +A++L+  MQ  G + ++ TLA    +   +  L+ GKQ+ 
Sbjct: 1073 DLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQ 1132

Query: 428  AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
            A  +K   ++D +V SG++ +Y KC   E A R+F+ IP  D V W +MI+G   N  + 
Sbjct: 1133 AVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEE 1192

Query: 488  EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
             A   +  MR +++ P +++FAT++ +C+ L++  QGRQ+HA   K     D FV ++L+
Sbjct: 1193 HALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLV 1252

Query: 548  EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
            +MY KCG+I  AR  F   +     +WN MI G AQ+G  +EA++ +++M + GV PD +
Sbjct: 1253 DMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRV 1312

Query: 608  TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
            TF+ +L+ACSHSGLV    E F SMQ  +G+EP ++HY+C++D L RAG   EAE +I  
Sbjct: 1313 TFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISS 1372

Query: 668  MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
            MP +    ++  LL++CR+  +    KR AE+L  L+P +SA Y LL+N+Y++  +W+++
Sbjct: 1373 MPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENV 1432

Query: 728  RAVRELMSENCIVKDPAYS 746
             + R +M +  + KDP +S
Sbjct: 1433 ASARNMMRKANVKKDPGFS 1451



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 173/605 (28%), Positives = 288/605 (47%), Gaps = 50/605 (8%)

Query: 105  LSVYNKMSNEGFVPTHITLA-----SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVAN 159
            L      +N    P H+  +     S+ + + A  D+  G+R H  ++  G   + ++ N
Sbjct: 606  LRAATSTANPFIPPAHLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTN 665

Query: 160  ALLSLYAKCGWTKHAVPVFEEMSEPNE--VTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
             L+++Y+KCG    A  +F+   + +   VT+ A++S  A  D+  +   +FRL+ R  V
Sbjct: 666  NLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILS--AHADKARDGFHLFRLLRRSFV 723

Query: 218  SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
            S    +L+ V  +C          + + S +        + +H   +K+G + D+ ++ +
Sbjct: 724  SATRHTLAPVFKMC----------LLSASPSA------AESLHGYAVKIGLQWDVFVAGA 767

Query: 278  LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
            L+++YAK G +  A V+F  +  R VV WNVM+  Y       +A+ L       G  PD
Sbjct: 768  LVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPD 827

Query: 338  EVTSINMLVACVRS---------GDIKT-GREMF---DSMPSPSVSSWNAMLSSYSQSEN 384
            +VT +  L   V+S           +K  G ++F   D      V +WN  LS + Q   
Sbjct: 828  DVT-LCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGE 886

Query: 385  HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
              EA+  F +M    V  D  T  ++LS  A +  LE GKQ+H   ++  S +D  V+ G
Sbjct: 887  TWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVR--SGLDQVVSVG 944

Query: 445  --LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
              LI +Y K      A  VF ++ E+D+V WN+MI+G +L+ L+  +   F  + +  + 
Sbjct: 945  NCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLL 1004

Query: 503  PTQFSFATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P QF+ A+VL +C+ L        Q+HA   K G V D FV + LI++Y K G +  A  
Sbjct: 1005 PDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEF 1064

Query: 562  FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
             F    G +  +WN M+HGY  +G   +A+RLY  M  SG + + IT      A    GL
Sbjct: 1065 LFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAA--GGL 1122

Query: 622  VDV--GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
            V +  G +I  ++ +  G    L   + ++D   + G    A  + +E+P  DD V W  
Sbjct: 1123 VGLKQGKQI-QAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDD-VAWTT 1180

Query: 680  LLSSC 684
            ++S C
Sbjct: 1181 MISGC 1185


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 213/698 (30%), Positives = 364/698 (52%), Gaps = 58/698 (8%)

Query: 89  NNLISALVRNGLEEKALSVYN---KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGL 145
           N+ I  L +    ++AL  ++   K SN  F P+  T  S+  A      +++ ++ H  
Sbjct: 127 NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPS--TYTSLVLACANFRSLDYAKKIHDH 184

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
           V+K     +I + N ++++Y KCG  K A  VF+ M  PN V++T+M+SG ++  +  +A
Sbjct: 185 VLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDA 244

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           + M+  M R     D ++  SV+  C   G   + D+             G+Q+H   IK
Sbjct: 245 IIMYIQMTRSGQFPDQLTFGSVIKACYIAG---DIDL-------------GRQLHAHVIK 288

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
             F   L   N+L+ MY   G ++ A  +F+ +P + ++SW  MI GY Q     +A+ L
Sbjct: 289 SWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYL 348

Query: 326 LQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGREM------------------------ 360
            + +   G ++P+E    ++  AC    +++ G+++                        
Sbjct: 349 FRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYA 408

Query: 361 -FDSMPS----------PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
            F  +PS          P + SWNA++++++ + +  EAI  FR+M   G+ PD  T   
Sbjct: 409 KFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYIS 468

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE-L 468
           +L +C +   L  G+Q+H+  +K     +  V + L+ +Y+KC     A  VF  I    
Sbjct: 469 LLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNA 528

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           ++V WN++++       + E F  +K+M  +   P   +  T+L +CA+L+S   G QVH
Sbjct: 529 NLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVH 588

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
               K G + D+ V + LI+MY KCG +  AR  FD     + V+W+ +I GYAQ G G 
Sbjct: 589 CYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGH 648

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
           EA+ L++ M   GV+P+++T++  L+ACSH GLV+ G  ++ SM+ +HG+ P  +H++C+
Sbjct: 649 EALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCI 708

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           +D L RAG  HEAE  I +     D   W+ LL++C+ H NV +A+R A  + +LDP NS
Sbjct: 709 VDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNS 768

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A   +L NI++S G W+++  +R+LM +  + K P  S
Sbjct: 769 AAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQS 806



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 156/565 (27%), Positives = 258/565 (45%), Gaps = 84/565 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            K +H H+L++       L N +I +Y KC +   A+ +FD M                 
Sbjct: 178 AKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTM----------------- 220

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                       ++P  NVVSW ++IS   +NG    A+ +Y +M+  G  P  +T  SV
Sbjct: 221 ------------QLP--NVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSV 266

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA     D++ GR+ H  VIK     ++   NAL+S+Y   G  +HA  VF  +   + 
Sbjct: 267 IKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDL 326

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +++  M++G  +    VEAL +FR ++R+     +     SV   C+             
Sbjct: 327 ISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACS------------- 373

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                    +G+QVH + +K G   ++    SL DMYAK G + SA++ F  +    +VS
Sbjct: 374 ---SLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVS 430

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF---- 361
           WN +IA +     + +AI+  ++M   G  PD +T I++L  C     +  GR++     
Sbjct: 431 WNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIV 490

Query: 362 --------------------------------DSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                           D   + ++ SWNA+LS+  Q +   E  
Sbjct: 491 KIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETF 550

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +L++EM F G KPD  T+  +L +CA +  L  G QVH  S+K+   +D  V +GLI +Y
Sbjct: 551 RLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMY 610

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC   + A  VF     LDIV W+S+I G +   L  EA   F+ M    + P + ++ 
Sbjct: 611 AKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYL 670

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKD 534
             LS+C+ +    +G +++  +E +
Sbjct: 671 GALSACSHIGLVEEGWRLYKSMETE 695



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 258/567 (45%), Gaps = 66/567 (11%)

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS-IDSVSLSSVLGVCAREG 235
           +F  +S+  E+   + +  L K     EALE F   ++ + S  +  + +S++  CA   
Sbjct: 116 IFSNLSK--ELPTNSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACA--- 170

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                         F    + +++H   +K  ++  + L N +++MY K G M  A  +F
Sbjct: 171 -------------NFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVF 217

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
             +   +VVSW  MI+GY Q  Q+  AI +  +M   G  PD++T  +++ AC  +GDI 
Sbjct: 218 DTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDID 277

Query: 356 TGREM-----------------------------------FDSMPSPSVSSWNAMLSSYS 380
            GR++                                   F  +P+  + SW  M++ Y 
Sbjct: 278 LGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYI 337

Query: 381 QSENHKEAIKLFREMQFRGV-KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           Q     EA+ LFR++  +G  +P+      + S+C+++  LE GKQVH   +K     + 
Sbjct: 338 QLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNV 397

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           +    L  +Y+K      A+  F +I   DIV WN++IA  + N    EA  FF+QM   
Sbjct: 398 FAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHI 457

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
            + P   ++ ++L +C       QGRQ+H+ I K G+  +I V ++L+ MY KC  ++ A
Sbjct: 458 GLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDA 517

Query: 560 RQFF-DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
              F D+    N V+WN ++    Q     E  RLYK+M  SG KPD IT   +L  C+ 
Sbjct: 518 LNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAE 577

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
              + VG ++ +   +  G+  ILD   C  +ID   + G    A  + D      D V 
Sbjct: 578 LTSLGVGNQV-HCYSIKSGL--ILDVSVCNGLIDMYAKCGSLKHARDVFDSTQ-NLDIVS 633

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRL 703
           W  L+     +A   L   A   LFR+
Sbjct: 634 WSSLIVG---YAQCGLGHEAL-NLFRI 656



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 194/415 (46%), Gaps = 58/415 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   ++ GL  + F    L ++Y+K     SA+  F ++ + DI            
Sbjct: 381 GKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDI------------ 428

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                              VSWN +I+A   NG   +A+  + +M + G  P  IT  S+
Sbjct: 429 -------------------VSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISL 469

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
                + + +  GR+ H  ++KIG DK I V N+LL++Y KC     A+ VF ++S   N
Sbjct: 470 LCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNAN 529

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-EGCGVESDVFA 244
            V++ A++S   +  +  E   +++ M       DS++++++LG CA     GV      
Sbjct: 530 LVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGV------ 583

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G QVHC +IK G   D+ + N L+DMYAK G +  A  +F +     +V
Sbjct: 584 -----------GNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIV 632

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SW+ +I GY Q     +A+ L + M + G +P+EVT +  L AC   G ++ G  ++ SM
Sbjct: 633 SWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSM 692

Query: 365 PS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
            +     P+   ++ ++   +++    EA      +Q  G+  D T    +L++C
Sbjct: 693 ETEHGIPPTREHFSCIVDLLARAGCLHEAETF---IQKSGLDADITAWKTLLAAC 744


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 231/785 (29%), Positives = 386/785 (49%), Gaps = 93/785 (11%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           +K+  AGKL+H HIL +G   + ++ N LI +Y+KC                        
Sbjct: 39  QKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCG----------------------- 75

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
               C  D LE    +F+ +P  NV SW  LI+A  + G   + L ++ KM  +G  P  
Sbjct: 76  ----CLEDALE----VFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDA 127

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
              ++V  A ++   +  G+  H   +  G++  + V NA+++LY KCG    A  VFE 
Sbjct: 128 FVFSTVLTACSSAGALNEGKAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFER 186

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVE 239
           + E N V++ A+++  A+     +A+++F LM +  +V  +  +  SV+  C+       
Sbjct: 187 LPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACS------- 239

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                           G+  H   I+ GF++ L + NSL++MY K G +D A ++F  + 
Sbjct: 240 ---------NLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMS 290

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMK-------------SC-------------- 332
            R+VVSW VMI  Y Q+     A +L +RM              SC              
Sbjct: 291 SRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRAEQIHA 350

Query: 333 -----GFEPDEVTSINMLVACVRSGDIKTGREMFDSMP--SPSVSSWNAMLSSYSQSENH 385
                GF+ D V  + ++    + G + +   +F+++   S +  +WNAM+S  +Q    
Sbjct: 351 HMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGES 410

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           K+A++ F +M+  GV+P+  T    L +C+++  L  G+Q+HA  L    H  N +++ +
Sbjct: 411 KQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENIHEAN-LSNAV 469

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +Y KC   + A   F ++PE D+V WN+MIA  + +    +A  FFKQM        +
Sbjct: 470 INMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDR 529

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV--NDIFVGSALIEMYCKCGDIYGARQFF 563
            ++   + +C  + S   G+ +H+ +         D  V +AL+ MY +CG ++ A+  F
Sbjct: 530 ATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVF 589

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
              H +N VTW+ +I   AQ+G  +EA+ L+++M   G KPD +TF  ++ ACS  G+V 
Sbjct: 590 WRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVK 649

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            GV  F SM  D+ +    DH+  M+D LGRAG   EAE ++ + PC    +   VLL +
Sbjct: 650 DGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEAEQVMRKNPC---ALAHAVLLGA 706

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPY----SLLANIYSSLGRWDDLRAVRELMSENCI 739
           C +H +V    R A+    LD KNSA +    ++LA +Y + GRW+D   VR+ +     
Sbjct: 707 CHVHGDVERGIRIAQSALELDWKNSASFAASMAMLAELYGAAGRWEDAARVRKAVESRNA 766

Query: 740 VKDPA 744
            ++P 
Sbjct: 767 RREPG 771


>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 611

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 211/618 (34%), Positives = 333/618 (53%), Gaps = 34/618 (5%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           G++ H  +   G  K+ ++   L+ +YA C     A  +F++M +PN   +TA+     +
Sbjct: 14  GKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPNVYAWTAIFGFYLR 73

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR----EGCGVESDVFAQSDNKFSRNV 254
                + ++ +  M    V  D+     VL  C +    EG                   
Sbjct: 74  HGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEG------------------- 114

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G  +H   I  G E++L + NSL+DMY K G+  SA ++F  + ER + SWN MI+GY 
Sbjct: 115 -GIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYV 173

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNA 374
               +  A+ELL  M+  GFEPD VT   ++ A  + G      E+   +  P++ SW  
Sbjct: 174 SNGLADLAVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTT 233

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGV-KPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           ++SSYS+   H  ++++F++M  R V  PD   L  +L SC  +G L SGK++H    K 
Sbjct: 234 LISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKM 293

Query: 434 ASHIDNYVASG--LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
            ++   Y ++G  L+ +Y+KC R + A  VF  + + DIV WN+MI G     L  +A  
Sbjct: 294 ETNTVFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIE 353

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVNDIF-VGSALIEM 549
            F++M++ ++   Q + +T+L  C       Q G  +HA + K   ++ +  V +A+I M
Sbjct: 354 CFREMQRMDIKNDQTTISTILPVC-----DLQYGNPIHAYVRKSITLSSVVTVWNAVIHM 408

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           YCKCG +  A   F  M  K+ V+WN MI G+  +G+G  A++L K+MI SG+ P+  TF
Sbjct: 409 YCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTF 468

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
            ++L+ACSHSGLVD G  +F SM  D+ + P ++HY+C++D L RAG F +A   I +MP
Sbjct: 469 TSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKMP 528

Query: 670 CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRA 729
            + D  IW  LL++CR + N+   + AAE+L R++PK +  Y  L+NIY+  GRWDD   
Sbjct: 529 LEPDKSIWGALLAACRAYQNLDFGRLAAEQLIRMEPKCAGHYVTLSNIYARAGRWDDAGR 588

Query: 730 VRELMSENCIVKDPAYSL 747
           VR+ +    +VK    SL
Sbjct: 589 VRKEIEGKGLVKPSGQSL 606



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 238/507 (46%), Gaps = 74/507 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS--- 62
            G  +H  ++  G   +  +CN LI++Y KC N  SA+ +F++M  +D++SWN+++S   
Sbjct: 114 GGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYV 173

Query: 63  --------------------------------AQCKSDDLEFAYKLFDEMPERNVVSWNN 90
                                           A C+    + A+++  ++ + N++SW  
Sbjct: 174 SNGLADLAVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTT 233

Query: 91  LISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI 149
           LIS+  + G  + +L V+  M   E   P    L SV  +   +  +  G+  HG   K+
Sbjct: 234 LISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKM 293

Query: 150 GLDKNIY--VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
             +   Y     ALL++YAKCG  + A+ VFE M + + VT+ AM+ G  + D   +A+E
Sbjct: 294 ETNTVFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIE 353

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
            FR M R  +  D  ++S++L VC               D ++   +H      +T+   
Sbjct: 354 CFREMQRMDIKNDQTTISTILPVC---------------DLQYGNPIHAYVRKSITL--- 395

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
             + + + N+++ MY K G + SA  IF ++P + VVSWN MI G+G       A++LL+
Sbjct: 396 -SSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLK 454

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQS 382
            M   G  P+  T  ++L AC  SG +  G  +F SM      +P +  ++ ++   +++
Sbjct: 455 EMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARA 514

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK----QVHAASLKTASHID 438
               +A+    +M    ++PD++    +L++C A   L+ G+    Q+     K A H  
Sbjct: 515 GQFADAVTFIHKMP---LEPDKSIWGALLAACRAYQNLDFGRLAAEQLIRMEPKCAGH-- 569

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRI 465
            YV   L  IY++  R + A RV   I
Sbjct: 570 -YVT--LSNIYARAGRWDDAGRVRKEI 593



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 167/710 (23%), Positives = 279/710 (39%), Gaps = 170/710 (23%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AGK +H  I  +G   D F+  +LI++Y+ C++  SAQ                      
Sbjct: 13  AGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQ---------------------- 50

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                    +LFD+MP+ NV +W  +    +R+G+ +K +  Y  M     +P +     
Sbjct: 51  ---------RLFDKMPQPNVYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPK 101

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V +A T LL  E G   H  VI  G + N+ V N+L+ +Y KCG  + A  VFEEM E +
Sbjct: 102 VLRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERD 161

Query: 186 EVTFTAMMSGLAK---TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             ++ +M+SG       D  VE L   RL                         G E DV
Sbjct: 162 LFSWNSMISGYVSNGLADLAVELLNCMRLD------------------------GFEPDV 197

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                                            N+L+D Y + G  D A  +   + + +
Sbjct: 198 VTW------------------------------NTLMDAYCQMGRFDEAWEVLKQIEQPN 227

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
           ++SW  +I+ Y +  +   ++ + Q M       PD     ++LV+C   G +++G+E+ 
Sbjct: 228 IISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIH 287

Query: 361 ------------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
                                               F+ M    + +WNAM+  + + + 
Sbjct: 288 GYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDL 347

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK--TASHIDNYVA 442
            K+AI+ FREMQ   +K D+TT++ IL  C     L+ G  +HA   K  T S +   V 
Sbjct: 348 GKQAIECFREMQRMDIKNDQTTISTILPVCD----LQYGNPIHAYVRKSITLSSVVT-VW 402

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + +I +Y KC     A  +F  +P  D+V WN+MI G  ++     A    K+M  + ++
Sbjct: 403 NAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIF 462

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDIYGARQ 561
           P   +F +VLS+C+      +G ++   + +D  +       S +++M  + G    A  
Sbjct: 463 PNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAVT 522

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
           F   M                                   ++PD   + A+L AC     
Sbjct: 523 FIHKMP----------------------------------LEPDKSIWGALLAACRAYQN 548

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +D G     + QL         HY  + +   RAG + +A  +  E+  K
Sbjct: 549 LDFGR--LAAEQLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEGK 596



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 164/348 (47%), Gaps = 16/348 (4%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L  C+ +  L +GKQ+H     +    D ++ + LI +Y+ C     A+R+F ++P+ +
Sbjct: 1   MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +  W ++      + +  +    +  M+ +++ P  + F  VL +C +L     G  +H 
Sbjct: 61  VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            +   G  +++ V ++LI+MY KCG+   AR  F+ M  ++  +WN MI GY  NG  D 
Sbjct: 121 DVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADL 180

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           AV L   M   G +PD +T+  ++ A    G  D   E+   ++     +P +  +T +I
Sbjct: 181 AVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIE-----QPNIISWTTLI 235

Query: 650 DCLGRAGHFHEA-----EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
               + G    +     +M+I E+   D   +  VL+ SCR    +R  K       +++
Sbjct: 236 SSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLV-SCRHIGALRSGKEIHGYGTKME 294

Query: 705 PKNSAPYS----LLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSLG 748
             N+  YS     L  +Y+  GR  D   V ELM ++ IV   A  LG
Sbjct: 295 -TNTVFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILG 341


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 189/544 (34%), Positives = 303/544 (55%), Gaps = 74/544 (13%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           NSL+ +  K+G +D A  +F ++PE    SWN M++G+ Q  +  +++E   +M    F 
Sbjct: 85  NSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFL 144

Query: 336 PDEVTSINMLVACV-----------------------------------RSGDIKTGREM 360
            +E +  + L AC                                    + G +    E+
Sbjct: 145 LNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEV 204

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F  M   ++ +WN++++ Y Q+    EA+++F  M   G++PD  TLA ++S+CA++  L
Sbjct: 205 FSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCAL 264

Query: 421 ESGKQVHAASLKTASHIDNYV-ASGLIGIYSKCQRNELAERVFHRI-------------- 465
           + G Q+HA  +KT    D+ V  + L+ +Y+KC +   A RVF R+              
Sbjct: 265 KEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSG 324

Query: 466 -----------------PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
                             + ++V WN++IAG + N  + EA   F+ +++  ++PT ++F
Sbjct: 325 YARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTF 384

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYV------NDIFVGSALIEMYCKCGDIYGARQF 562
             +LS+CA L+    GRQ H  + K G+       +DIFVG++LI+MY KCG I    + 
Sbjct: 385 GNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRV 444

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F+ M  ++ V+WN +I GYAQNGYG EA+++++ M+  G KPD +T + +L ACSH+GLV
Sbjct: 445 FEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLV 504

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           + G   F SM+ +HG+ P+ DHYTCM+D LGRAG  +EA+ LI+ MP   D V+W  LL+
Sbjct: 505 EEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLA 563

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           +C++H N+ + K AAE+L  +DP NS PY LL+N+Y+ LGRW D+  VR+LM +  + K 
Sbjct: 564 ACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQ 623

Query: 743 PAYS 746
           P  S
Sbjct: 624 PGCS 627



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 234/491 (47%), Gaps = 89/491 (18%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           +L+HA IL      + F+ NRLI++Y KC+    A+ LFD+MP ++ ++WN+++S   KS
Sbjct: 35  RLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKS 94

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
             L+ A +LF  MPE +  SWN+++S   ++   E++L  + KM  E F+    +  S  
Sbjct: 95  GFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSAL 154

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A   L+D+  G + H LV K     ++Y+ +AL+ +Y+KCG    A  VF  M E N V
Sbjct: 155 SACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLV 214

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           T+ ++++   +     EALE+F  M+   +  D V+L+SV+  CA   C ++        
Sbjct: 215 TWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACA-SLCALK-------- 265

Query: 248 NKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAK---------------------- 284
                   G Q+H   +K   F  DL L N+L+DMYAK                      
Sbjct: 266 -------EGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSE 318

Query: 285 ---------NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
                       + +A  +FS + +R+VVSWN +IAGY Q  ++ +A+ L + +K     
Sbjct: 319 TSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIW 378

Query: 336 PDEVTSINMLVAC-----------------------------------------VRSGDI 354
           P   T  N+L AC                                         ++ G I
Sbjct: 379 PTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSI 438

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           + G  +F+ M      SWNA++  Y+Q+    EA+++FR+M   G KPD  T+  +L +C
Sbjct: 439 EDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCAC 498

Query: 415 AAMGILESGKQ 425
           +  G++E G+ 
Sbjct: 499 SHAGLVEEGRH 509



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 216/469 (46%), Gaps = 74/469 (15%)

Query: 251 SRNVHGQQ-VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
           SR+  G + VH   +   F  ++ + N L+D+Y K   +D A  +F  +P+R+  +WN +
Sbjct: 28  SRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSL 87

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSV 369
           I+                                      +SG +     +F SMP P  
Sbjct: 88  IS-----------------------------------VLTKSGFLDEAARLFGSMPEPDQ 112

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
            SWN+M+S ++Q +  +E+++ F +M       +  +    LS+CA +  L  G QVHA 
Sbjct: 113 CSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHAL 172

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
             K+    D Y+ S LI +YSKC     AE VF  + E ++V WNS+I     N    EA
Sbjct: 173 VSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEA 232

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK-DGYVNDIFVGSALIE 548
              F +M  + + P + + A+V+S+CA L +  +G Q+HA++ K + + +D+ +G+AL++
Sbjct: 233 LEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVD 292

Query: 549 MYCKCGDIYGARQFFDMMH-------------------------------GKNTVTWNEM 577
           MY KC  +  AR+ FD M                                 +N V+WN +
Sbjct: 293 MYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNAL 352

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE-----IFNSM 632
           I GY QNG  +EA+RL++ +    + P   TF  +L+AC++   + +G +     +    
Sbjct: 353 IAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGF 412

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           +   G E  +     +ID   + G   +   + ++M  + D V W  ++
Sbjct: 413 EFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMK-ERDCVSWNAII 460



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 201/419 (47%), Gaps = 63/419 (15%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y  +A++    K   +  A ++F  M ERN+V+WN+LI+   +NG   +AL V+ +M 
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM 240

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWT 171
           + G  P  +TLASV  A  +L  ++ G + H  V+K      ++ + NAL+ +YAKC   
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAK--------------TDRVV-------------- 203
             A  VF+ MS  N V+ T+M+SG A+              T R V              
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNG 360

Query: 204 ---EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              EAL +FRL+ R+++     +  ++L  CA                  +  + G+Q H
Sbjct: 361 ENEEALRLFRLLKRESIWPTHYTFGNLLSACA----------------NLADLLLGRQAH 404

Query: 261 CLTIKLGFE------ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
              +K GFE      +D+ + NSL+DMY K G ++    +F  + ER  VSWN +I GY 
Sbjct: 405 THVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYA 464

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS----PSVS 370
           Q     +A+++ ++M  CG +PD VT I +L AC  +G ++ GR  F SM      P   
Sbjct: 465 QNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKD 524

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
            +  M+    ++    EA  L   M    V PD      +L++C   G +E GK  HAA
Sbjct: 525 HYTCMVDLLGRAGCLNEAKNLIEAMP---VNPDAVVWGSLLAACKVHGNIEMGK--HAA 578



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 177/369 (47%), Gaps = 38/369 (10%)

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC--------- 452
           P+ +  A +L SC         + VHA  L T   ++ ++ + LI +Y KC         
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 453 -----QRNEL-----------------AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
                QRN                   A R+F  +PE D   WNSM++G + +    E+ 
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
            +F +M + +    ++SF + LS+CA L     G QVHA + K  Y  D+++GSALI+MY
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            KCG +  A + F  M  +N VTWN +I  Y QNG   EA+ ++  M+ SG++PD++T  
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
           ++++AC+    +  G++I   +   +     L     ++D   +    +EA  + D M  
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELF-RLDPKNSAPYSLLANIYSSLGRWDD-LR 728
           ++  V+ E  + S    A    + +AA  +F ++  +N   ++ L   Y+  G  ++ LR
Sbjct: 313 RN--VVSETSMVSGYARA---ASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALR 367

Query: 729 AVRELMSEN 737
             R L  E+
Sbjct: 368 LFRLLKRES 376



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 181/365 (49%), Gaps = 28/365 (7%)

Query: 7   GKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G  +HA +++   F DD  L N L+++Y+KC+  + A+ +FD+M  +++ S  +++S   
Sbjct: 267 GLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYA 326

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++  ++ A  +F +M +RNVVSWN LI+   +NG  E+AL ++  +  E   PTH T  +
Sbjct: 327 RAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGN 386

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGL------DKNIYVANALLSLYAKCGWTKHAVPVFE 179
           +  A   L D+  GR+ H  V+K G       + +I+V N+L+ +Y KCG  +    VFE
Sbjct: 387 LLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFE 446

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           +M E + V++ A++ G A+     EAL++FR M+      D V++  VL  C+  G   E
Sbjct: 447 KMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEE 506

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
              +      FS   HG     + +K  +         ++D+  + G ++ A+ +   +P
Sbjct: 507 GRHYF-----FSMEEHG----LIPLKDHY-------TCMVDLLGRAGCLNEAKNLIEAMP 550

Query: 300 -ERSVVSWNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
                V W  ++A    +G       A E L  +      P  + S NM     R GD+ 
Sbjct: 551 VNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLS-NMYAELGRWGDVV 609

Query: 356 TGREM 360
             R++
Sbjct: 610 RVRKL 614


>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
 gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
          Length = 695

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 198/570 (34%), Positives = 303/570 (53%), Gaps = 52/570 (9%)

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F+ +  P      A +SGL+K     E +E+   + R+  +I S  +  VL  CA+   
Sbjct: 130 LFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSGCIPLVLKSCAQSAA 189

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
             +                G Q HC  +  G   D+ +  +L+D YAKNGDMDSA + F 
Sbjct: 190 SCQ----------------GSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFK 233

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            +P +  +  N +I GY                                    +SGD++ 
Sbjct: 234 EMPVKDPIPMNCLITGYS-----------------------------------KSGDVEE 258

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R +FDSMP  + +SWN+M++ Y+     +EA+ LF +M   G  P+  T+  + S CA 
Sbjct: 259 ARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNAITITTVFSICAK 318

Query: 417 MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
            G L++G++  A  ++     +  V + L+ +Y KC+  + A   F R+P  D+V W++M
Sbjct: 319 TGDLDTGRRARAW-IREEDLQNVIVHTALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTM 377

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
           IAG S N    E+   F++M+     P + +   VLS+CA+L S   G Q+   IE    
Sbjct: 378 IAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGNYIESQTL 437

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
               ++GSALI+MY KCG +  AR  F+ M  K  VTWN MI G A NG+ ++A+ LY+ 
Sbjct: 438 PLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALYRK 497

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M+  G++P+++TFVA+LTAC+H+GLVD G+  F  M+    V P ++H  C++D L ++G
Sbjct: 498 MVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVDLLCKSG 557

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              EA   I +M  + + VIW  LLS+CR HA+V LAK AA +L  L+P NS+ Y LL+N
Sbjct: 558 RLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNSSIYVLLSN 617

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           IY+  G W D+R +R+LM    + K  AYS
Sbjct: 618 IYADAGLWGDVREIRDLMRSKNLQKLSAYS 647



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/427 (30%), Positives = 208/427 (48%), Gaps = 25/427 (5%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A   G   H H L  G+  D F+   L++ Y+K  +  SA   F +MP KD    N +++
Sbjct: 189 ASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEMPVKDPIPMNCLIT 248

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              KS D+E A +LFD MP R   SWN++I+     G   +AL+++++M  EG  P  IT
Sbjct: 249 GYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNAIT 308

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + +VF       D++ GRR    + +  L +N+ V  AL+ +Y KC     A   F+ M 
Sbjct: 309 ITTVFSICAKTGDLDTGRRARAWIREEDL-QNVIVHTALMEMYVKCRAIDEARHEFDRMP 367

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + V ++ M++G ++  R  E+LE+F  M       + V+L  VL  CA+ G    SD 
Sbjct: 368 RRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLG----SDE 423

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
             +    +  +    Q   LT  LG        ++L+DMY K G +  A  +F+ + ++ 
Sbjct: 424 LGEQIGNYIES----QTLPLTSYLG--------SALIDMYTKCGHVARARSVFNRMEQKV 471

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           VV+WN MI G      +  AI L ++M   G +P+EVT + +L AC  +G +  G   F+
Sbjct: 472 VVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFE 531

Query: 363 SMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
            M      SP V     ++    +S    EA K   +M+   V+P+    + +LS+C A 
Sbjct: 532 EMKKKQHVSPQVEHCACIVDLLCKSGRLWEAYKFICDME---VEPNAVIWSTLLSACRAH 588

Query: 418 GILESGK 424
             +E  K
Sbjct: 589 ADVELAK 595



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 158/346 (45%), Gaps = 35/346 (10%)

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +  R +FD +P P+ +   A LS  S+   H+E I++   +  RG       + ++L SC
Sbjct: 125 RAARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSGCIPLVLKSC 184

Query: 415 AAMGILESGKQVHAASL---------KTASHIDNYVASG--------------------- 444
           A       G Q H  +L            + +D Y  +G                     
Sbjct: 185 AQSAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEMPVKDPIPMN 244

Query: 445 -LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            LI  YSK    E A R+F  +P      WNSMIA  +      EA   F QM +    P
Sbjct: 245 CLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASP 304

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              +  TV S CAK      GR+  A I ++   N + V +AL+EMY KC  I  AR  F
Sbjct: 305 NAITITTVFSICAKTGDLDTGRRARAWIREEDLQN-VIVHTALMEMYVKCRAIDEARHEF 363

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D M  ++ V W+ MI GY+QNG   E++ L++ M A+  KP+++T V +L+AC+  G  +
Sbjct: 364 DRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDE 423

Query: 624 VGVEIFNSMQLDHGVEPILDHY-TCMIDCLGRAGHFHEAEMLIDEM 668
           +G +I N   ++    P+  +  + +ID   + GH   A  + + M
Sbjct: 424 LGEQIGN--YIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRM 467



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 136/619 (21%), Positives = 261/619 (42%), Gaps = 119/619 (19%)

Query: 32  LYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
           L S  +   +A+HLFD +P        A LS   K    +   ++   +  R     +  
Sbjct: 117 LLSNASTYRAARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSGC 176

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD--VEHGRRCHGLV-IK 148
           I  ++++  +  A    ++      V     L  VF   TAL+D   ++G     L+  K
Sbjct: 177 IPLVLKSCAQSAASCQGSQTHCHALV--RGMLGDVF-VQTALVDFYAKNGDMDSALMAFK 233

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
               K+    N L++ Y+K G  + A  +F+ M      ++ +M++  A      EAL +
Sbjct: 234 EMPVKDPIPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTL 293

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREG---CGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           F  M+R+  S +++++++V  +CA+ G    G  +  + + ++  +  VH          
Sbjct: 294 FDQMLREGASPNAITITTVFSICAKTGDLDTGRRARAWIREEDLQNVIVH---------- 343

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
                      +L++MY K   +D A   F  +P R VV+W+ MIAGY Q  +  +++EL
Sbjct: 344 ----------TALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLEL 393

Query: 326 LQRMKSCGFEPDEVTSINMLVAC-----------------------------------VR 350
            +RMK+   +P+EVT + +L AC                                    +
Sbjct: 394 FERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGNYIESQTLPLTSYLGSALIDMYTK 453

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
            G +   R +F+ M    V +WN+M+   + +   ++AI L+R+M   G++P+  T   +
Sbjct: 454 CGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNEVTFVAL 513

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE-LAERVFHRIPELD 469
           L++C   G+++ G                      I  + + ++ + ++ +V H    +D
Sbjct: 514 LTACTHAGLVDKG----------------------IAFFEEMKKKQHVSPQVEHCACIVD 551

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC-----AKLSSSFQG 524
           ++C +  +          EA+ F   M   E+ P    ++T+LS+C      +L+    G
Sbjct: 552 LLCKSGRL---------WEAYKFICDM---EVEPNAVIWSTLLSACRAHADVELAKLAAG 599

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN-----TVTWNEM-- 577
           + V   +E +   + I+V   L  +Y   G     R+  D+M  KN       +W E+  
Sbjct: 600 KLV--ALEPNN--SSIYV--LLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDG 653

Query: 578 -IHGY-AQNGYGDEAVRLY 594
            +H +  Q+ Y   +  +Y
Sbjct: 654 EVHRFLVQDTYHPRSAEIY 672



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 38/273 (13%)

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A  +F  +P        + ++GLS  SL  E       + +            VL SCA+
Sbjct: 127 ARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSGCIPLVLKSCAQ 186

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC-------------------------- 551
            ++S QG Q H      G + D+FV +AL++ Y                           
Sbjct: 187 SAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEMPVKDPIPMNCL 246

Query: 552 -----KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
                K GD+  AR+ FD M  + + +WN MI  YA  G   EA+ L+  M+  G  P+ 
Sbjct: 247 ITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNA 306

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           IT   + + C+ +G +D G      ++ +  ++ ++ H T +++   +     EA    D
Sbjct: 307 ITITTVFSICAKTGDLDTGRRARAWIR-EEDLQNVIVH-TALMEMYVKCRAIDEARHEFD 364

Query: 667 EMPCKDDPVIWEVLLS----SCRLHANVRLAKR 695
            MP + D V W  +++    + R H ++ L +R
Sbjct: 365 RMP-RRDVVAWSTMIAGYSQNGRPHESLELFER 396


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 220/698 (31%), Positives = 361/698 (51%), Gaps = 66/698 (9%)

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
           ++A  + + +     V WN LI   ++ G  + A++V  +M   G    H TL  V KA 
Sbjct: 68  DYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKAC 127

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE---PNEV 187
             L     G   HGL+   G + N+++ NAL+++Y++CG  + A  +F+E+++    + +
Sbjct: 128 GELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVI 187

Query: 188 TFTAMMSGLAKTDRVVEALEMF---RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           ++ +++S   K+     AL++F    L++ +  + +   + S++ +     CG    V  
Sbjct: 188 SWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL--PACGSLKAV-- 243

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 ++ VHG       I+ G   D+ + N+L+D YAK G M++A  +F+ +  + VV
Sbjct: 244 ----PQTKEVHGN-----AIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 294

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SWN M+AGY Q      A EL + M+      D VT                        
Sbjct: 295 SWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVT------------------------ 330

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
                  W A+++ YSQ     EA+ +FR+M F G  P+  T+  +LS+CA++G    G 
Sbjct: 331 -------WTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGM 383

Query: 425 QVHAASLKTAS-HIDN---------YVASGLIGIYSKCQRNELAERVFHRIP--ELDIVC 472
           ++HA SLK     +DN          V + LI +YSKC+  + A  +F  IP  E ++V 
Sbjct: 384 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 443

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNE--MYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           W  MI G +      +A   F +M      + P  ++ + +L +CA L++   G+Q+HA 
Sbjct: 444 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 503

Query: 531 IEKDGYVND--IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
           + +    +    FV + LI MY KCGD+  AR  FD M  K+ ++W  M+ GY  +G G 
Sbjct: 504 VLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGS 563

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
           EA+ ++  M  +G  PDDITF+ +L ACSH G+VD G+  F+SM  D+G+ P  +HY   
Sbjct: 564 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYA 623

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           ID L R G   +A   + +MP +   V+W  LLS+CR+H+NV LA+ A  +L  ++ +N 
Sbjct: 624 IDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEND 683

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             Y+L++NIY++ GRW D+  +R LM ++ I K P  S
Sbjct: 684 GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 721



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 247/488 (50%), Gaps = 47/488 (9%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA    K +H + +RNG F D F+ N LI+ Y+KC    +A  +F+ M  KD+ SWNA++
Sbjct: 241 KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 300

Query: 62  SAQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +   +S + + A++LF  M + N+    V+W  +I+   + G   +AL+V+ +M   G +
Sbjct: 301 AGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSL 360

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKI----------GLDKNIYVANALLSLYAK 167
           P  +T+ SV  A  +L     G   H   +K           G D+++ V NAL+ +Y+K
Sbjct: 361 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 420

Query: 168 CGWTKHAVPVFEE--MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK--AVSIDSVS 223
           C   K A  +F++  + E N VT+T M+ G A+     +AL++F  MI +   V+ ++ +
Sbjct: 421 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 480

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL-GFEADLH-LSNSLLDM 281
           +S +L  CA                  +    G+Q+H   ++   +++  + ++N L++M
Sbjct: 481 ISCILMACAH----------------LAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 524

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           Y+K GD+D+A  +F ++ ++S +SW  M+ GYG   + ++A+++  +M+  GF PD++T 
Sbjct: 525 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 584

Query: 342 INMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           + +L AC   G +  G   FDSM      +P    +   +   ++     +A K  ++M 
Sbjct: 585 LVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMP 644

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG-IYSKCQRN 455
              ++P       +LS+C     +E  +  HA +     + +N  +  LI  IY+   R 
Sbjct: 645 ---MEPTAVVWVALLSACRVHSNVELAE--HALNKLVEMNAENDGSYTLISNIYATAGRW 699

Query: 456 ELAERVFH 463
           +   R+ H
Sbjct: 700 KDVARIRH 707



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 157/610 (25%), Positives = 262/610 (42%), Gaps = 142/610 (23%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK---DIYSWNAILSA 63
           G   H  I  NG   + F+CN L+ +YS+C +   A  +FD++  +   D+ SWN+I+SA
Sbjct: 136 GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSA 195

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             KS +   A  LF +M                        L V+ K +NE      I++
Sbjct: 196 HVKSSNAWTALDLFSKM-----------------------TLIVHEKPTNER--SDIISI 230

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            ++  A  +L  V   +  HG  I+ G   +++V NAL+  YAKCG  ++AV VF  M  
Sbjct: 231 VNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEF 290

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DV 242
            + V++ AM++G +++     A E+F+ M ++ + +D V+ ++V+   ++ GC  E+ +V
Sbjct: 291 KDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNV 350

Query: 243 FAQ---------------------SDNKFSRNVHGQQVHCLTIK----------LGFEAD 271
           F Q                     S   FS+   G ++H  ++K           G + D
Sbjct: 351 FRQMIFSGSLPNCVTIISVLSACASLGAFSQ---GMEIHAYSLKNCLLTLDNDFGGEDED 407

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           L + N+L+DMY+K     +A  IF ++P  ER+VV+W VMI G+ Q   S  A++L   M
Sbjct: 408 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 467

Query: 330 KS--CGFEPDEVTSINMLVACV-------------------------------------R 350
            S   G  P+  T   +L+AC                                      +
Sbjct: 468 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 527

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
            GD+ T R +FDSM   S  SW +M++ Y       EA+ +F +M+  G  PD  T  ++
Sbjct: 528 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 587

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           L +C+  G+++ G           S+ D+  A    G+  + +    A  +  R   LD 
Sbjct: 588 LYACSHCGMVDQG----------LSYFDSMSAD--YGLTPRAEHYAYAIDLLARFGRLDK 635

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC-----AKLSSSFQGR 525
                                 +K ++   M PT   +  +LS+C      +L+     +
Sbjct: 636 A---------------------WKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNK 674

Query: 526 QVHAQIEKDG 535
            V    E DG
Sbjct: 675 LVEMNAENDG 684



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 3/155 (1%)

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           +  + +++   +G+ ++  Y  CG    A    + +     V WN +I  + + G  D A
Sbjct: 42  LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 101

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           + +   M+ +G + D  T   +L AC        G   F+ +   +G E  +     ++ 
Sbjct: 102 INVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCG-SAFHGLICCNGFESNVFICNALVA 160

Query: 651 CLGRAGHFHEAEMLIDEMPCK--DDPVIWEVLLSS 683
              R G   EA M+ DE+  +  DD + W  ++S+
Sbjct: 161 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSA 195


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 198/576 (34%), Positives = 313/576 (54%), Gaps = 53/576 (9%)

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +A+ VFE + EPN + +  M  G A +   V AL+++  MI   +  +S +   +L  CA
Sbjct: 15  YAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCA 74

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                           K   +  G Q+H   +KLG+E DL++  SL+ MY +N  ++ A 
Sbjct: 75  ----------------KLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAH 118

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F     R VVS+  ++ GY  +                                   G
Sbjct: 119 KVFDRSSHRDVVSYTALVTGYASR-----------------------------------G 143

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            I++ R MFD +P   V SWNAM+S Y ++ N+KEA++LF+EM    V+PD +T+  ++S
Sbjct: 144 YIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVIS 203

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           + A  G +E G+QVH+         +  + + LI  YSKC   E A  +F  +   D++ 
Sbjct: 204 ASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVIS 263

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           WN +I G +  +L  EA + F++M ++   P   +  ++L +CA L +   GR +H  I+
Sbjct: 264 WNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYID 323

Query: 533 K--DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           K   G  N   + ++LI+MY KCGDI  A Q F+ M  K+   WN MI G+A +G  + A
Sbjct: 324 KRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAA 383

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
             ++  M  + +KPDDITFV +L+ACSH+G++D+G  IF SM  ++ + P L+HY CMID
Sbjct: 384 FDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMID 443

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            LG +G F EAE +I  M  + D VIW  LL +C++H NV L ++ A+ LF+++P N   
Sbjct: 444 LLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGS 503

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y LL+NIY++ GRW+++  +R L+++  + K P  S
Sbjct: 504 YVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCS 539



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 216/431 (50%), Gaps = 26/431 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G  +H H+L+ G   D ++   LI +Y +      A  +FD+  H+D+ S+ A++
Sbjct: 77  KASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALV 136

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +       +E A  +FDE+P ++VVSWN +IS  V  G  ++AL ++ +M      P   
Sbjct: 137 TGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDES 196

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ +V  AS     +E GR+ H  +   G   N+ + NAL+  Y+KCG  + A  +F  +
Sbjct: 197 TMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGL 256

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S  + +++  ++ G    +   EAL +F+ M+R   S + V++ S+L  CA  G     D
Sbjct: 257 SYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA---ID 313

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKL--GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           +             G+ +H    K   G      L  SL+DMY+K GD+++A  +F+++ 
Sbjct: 314 I-------------GRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSML 360

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            +S+ +WN MI G+    ++  A ++  RM+    +PD++T + +L AC  +G +  GR 
Sbjct: 361 HKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRH 420

Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +F SM      +P +  +  M+     S   KEA ++   M    ++PD      +L +C
Sbjct: 421 IFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMT---MEPDGVIWCSLLKAC 477

Query: 415 AAMGILESGKQ 425
              G +E G++
Sbjct: 478 KMHGNVELGEK 488



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 195/427 (45%), Gaps = 84/427 (19%)

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           + L +A  +F+ + E N++ WN +      +     AL +Y  M + G +P   T   + 
Sbjct: 11  EGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLL 70

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL----------------------- 164
           K+   L   + G + HG V+K+G + ++YV  +L+S+                       
Sbjct: 71  KSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVV 130

Query: 165 --------YAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
                   YA  G+ + A  +F+E+   + V++ AM+SG  +T    EALE+F+ M++  
Sbjct: 131 SYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTN 190

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  ++ +V+   AR G  +E                G+QVH      GF ++L + N
Sbjct: 191 VRPDESTMVTVISASARSG-SIEL---------------GRQVHSWIADHGFGSNLKIVN 234

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D Y+K G+M++A  +F  L  + V+SWN++I GY       +A+ L Q M   G  P
Sbjct: 235 ALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESP 294

Query: 337 DEVTSINMLVACV-------------------------------------RSGDIKTGRE 359
           ++VT +++L AC                                      + GDI+   +
Sbjct: 295 NDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQ 354

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F+SM   S+ +WNAM+  ++       A  +F  M+   +KPD  T   +LS+C+  G+
Sbjct: 355 VFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGM 414

Query: 420 LESGKQV 426
           L+ G+ +
Sbjct: 415 LDLGRHI 421


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 227/722 (31%), Positives = 365/722 (50%), Gaps = 86/722 (11%)

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L   C +  LE A KL + M E  V    ++  ALVR       L  + +   EG     
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVR-------LCEWKRAQEEGSKVYS 118

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           I L+S+     + L VE G                   NA L+++ + G    A  VF +
Sbjct: 119 IALSSM-----SSLGVELG-------------------NAFLAMFVRFGNLVDAWYVFGK 154

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           MSE N  ++  ++ G AK     EA+ ++ R++    V  D  +   VL       CG  
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVL-----RTCGGI 209

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
            D+             G++VH   ++ G+E D+ + N+L+ MY K GD+ SA ++F  +P
Sbjct: 210 PDL-----------ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            R ++SWN MI+GY +     + +EL   M+    +PD +T  +++ AC   GD + GR+
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318

Query: 360 -----------------------------------MFDSMPSPSVSSWNAMLSSYSQSEN 384
                                              +F  M    + SW  M+S Y  +  
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
             +AI  +R M    VKPD  T+A +LS+CA +G L++G ++H  ++K        VA+ 
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI +YSKC+  + A  +FH IP  +++ W S+IAGL LN+   EA +F +QM+   + P 
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPN 497

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
             +    L++CA++ +   G+++HA + + G   D F+ +AL++MY +CG +  A   F+
Sbjct: 498 AITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN 557

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
               K+  +WN ++ GY++ G G   V L+  M+ S V+PD+ITF+++L  CS S +V  
Sbjct: 558 S-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQ 616

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G+  F+ M+ D+GV P L HY C++D LGRAG   EA   I +MP   DP +W  LL++C
Sbjct: 617 GLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           R+H  + L + +A+ +F LD K+   Y LL N+Y+  G+W ++  VR +M EN +  D  
Sbjct: 676 RIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAG 735

Query: 745 YS 746
            S
Sbjct: 736 CS 737



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 261/545 (47%), Gaps = 54/545 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA L+   +  +L  A+ +F +M ERN+ SWN L+    + G  ++A+ +Y++M   G V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192

Query: 118 -PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
            P   T   V +    + D+  G+  H  V++ G + +I V NAL+++Y KCG  K A  
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F+ M   + +++ AM+SG  +     E LE+F  M   +V  D ++L+SV+  C   G 
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG- 311

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                     D +  R++H        I  GF  D+ + NSL  MY   G    AE +FS
Sbjct: 312 ----------DRRLGRDIHA-----YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFS 356

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            +  + +VSW  MI+GY   +   KAI+  + M     +PDE+T   +L AC   GD+ T
Sbjct: 357 RMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416

Query: 357 GREM-----------------------------------FDSMPSPSVSSWNAMLSSYSQ 381
           G E+                                   F ++P  +V SW ++++    
Sbjct: 417 GVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRL 476

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +    EA+   R+M+   ++P+  TL   L++CA +G L  GK++HA  L+T   +D+++
Sbjct: 477 NNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFL 535

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + L+ +Y +C R   A   F+   + D+  WN ++ G S           F +M ++ +
Sbjct: 536 PNALLDMYVRCGRMNTAWSQFNSQKK-DVTSWNILLTGYSERGQGSMVVELFDRMVKSRV 594

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P + +F ++L  C+K     QG    +++E  G   ++   + ++++  + G++  A +
Sbjct: 595 RPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHK 654

Query: 562 FFDMM 566
           F   M
Sbjct: 655 FIQKM 659



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 196/412 (47%), Gaps = 56/412 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA+++  G   D  +CN L ++Y    +   A+                       
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAE----------------------- 352

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   KLF  M  +++VSW  +IS    N L +KA+  Y  M  +   P  IT+A+V
Sbjct: 353 --------KLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAV 404

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L D++ G   H L IK  L   + VAN L+++Y+KC     A+ +F  +   N 
Sbjct: 405 LSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNV 464

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++T++++GL   +R  EAL   R M +  +  ++++L++ L  CAR G           
Sbjct: 465 ISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGA---------- 513

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                  + G+++H   ++ G   D  L N+LLDMY + G M++A   F N  ++ V SW
Sbjct: 514 ------LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSW 566

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N+++ GY ++ Q +  +EL  RM      PDE+T I++L  C +S  ++ G   F  M  
Sbjct: 567 NILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED 626

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
              +P++  +  ++    ++   +EA K  ++M    V PD      +L++C
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP---VTPDPAVWGALLNAC 675



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 197/451 (43%), Gaps = 82/451 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H H++R G   D  + N LI +Y KC                              
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCG----------------------------- 245

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D++ A  LFD MP R+++SWN +IS    NG+  + L ++  M      P  +TL SV
Sbjct: 246 --DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L D   GR  H  VI  G   +I V N+L  +Y   G  + A  +F  M   + 
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T M+SG        +A++ +R+M + +V  D +++++VL  CA  G   + D     
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLG---DLDT---- 416

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G ++H L IK    + + ++N+L++MY+K   +D A  IF N+P ++V+SW
Sbjct: 417 ---------GVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISW 467

Query: 307 NVMIAGYGQKYQSTKAIELLQRMK-----------------------SCGFEP------- 336
             +IAG     +  +A+  L++MK                        CG E        
Sbjct: 468 TSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRT 527

Query: 337 ----DEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
               D+     +L   VR G + T    F+S     V+SWN +L+ YS+       ++LF
Sbjct: 528 GVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELF 586

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESG 423
             M    V+PD  T   +L  C+   ++  G
Sbjct: 587 DRMVKSRVRPDEITFISLLCGCSKSQMVRQG 617



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 75/340 (22%), Positives = 147/340 (43%), Gaps = 38/340 (11%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + GK +HAH+LR G+  D FL N L+++Y +C   ++A   F+    KD+ SWN +L+
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLT 571

Query: 63  AQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
              +        +LFD M +  V    +++ +L+    ++ +  + L  ++KM + G  P
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTP 631

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS---LYAKCGWTKHAV 175
                A V        +++     H  + K+ +  +  V  ALL+   ++ K    + + 
Sbjct: 632 NLKHYACVVDLLGRAGELQEA---HKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSA 688

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
               E+ + +   +  + +  A   +  E  ++ R+M    +++D+             G
Sbjct: 689 QHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDA-------------G 735

Query: 236 CG---VESDVFA-QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           C    V+  V A  SD+K+    H Q     T+  GF     +S   L   +++  MD  
Sbjct: 736 CSWVEVKGKVHAFLSDDKY----HPQTKEINTVLEGFYE--KMSEVGLTKISESSSMDET 789

Query: 292 EV----IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           E+    IF    ER  +++ ++    G     TK + + +
Sbjct: 790 EISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCE 829


>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 748

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 226/725 (31%), Positives = 376/725 (51%), Gaps = 45/725 (6%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
            F  NR I    K      A  +F  M HK++ ++N+++S   K+  +  A +LFD+M  
Sbjct: 17  AFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSL 76

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
           RN+VSWN +I+  + N + E+A  +++ M        + + A +    T    +E  R  
Sbjct: 77  RNLVSWNTMIAGYLHNNMVEEASELFDVMPER----DNFSWALMITCYTRKGKLEKAREL 132

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
             LV    LD   +  NA+++ YAK G    A  VFE+M   + V++ +M++G  +  ++
Sbjct: 133 LELVPD-KLDTACW--NAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKM 189

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
             AL+ F  M  + V   ++ ++            V+S   + +   F +  +   V  +
Sbjct: 190 HLALQFFESMTERNVVSWNLMVAGY----------VKSGDLSSAWQLFEKIPNPNAVSWV 239

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
           T+  G               AK G M  A  +F  +P ++VVSWN MIA Y Q  Q  +A
Sbjct: 240 TMLCGL--------------AKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEA 285

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
           ++L ++M       D V+   ++   +R G +   R++++ MP   +++  A++S   Q+
Sbjct: 286 VKLFKKMP----HKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQN 341

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               EA ++F  +    V    + +A         G   SG+   A +L     I N V+
Sbjct: 342 GRIDEADQMFSRIGAHDVVCWNSMIA---------GYSRSGRMDEALNLFRQMPIKNSVS 392

Query: 443 -SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + +I  Y++  + + A  +F  + E +IV WNS+IAG   N+L ++A      M +   
Sbjct: 393 WNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGK 452

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P Q +FA  LS+CA L++   G Q+H  I K GY+ND+FVG+ALI MY KCG +  A Q
Sbjct: 453 KPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQ 512

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F  +   + ++WN +I GYA NGY ++A + ++ M +  V PD++TF+ +L+ACSH+GL
Sbjct: 513 VFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGL 572

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            + G++IF  M  D  +EP+ +HY+C++D LGR G   EA   +  M  K +  +W  LL
Sbjct: 573 ANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLL 632

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
            +CR+H N+ L + AAE LF L+P N++ Y  L+N+++  GRW+++  VR LM      K
Sbjct: 633 GACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGK 692

Query: 742 DPAYS 746
            P  S
Sbjct: 693 QPGCS 697



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 267/554 (48%), Gaps = 75/554 (13%)

Query: 7   GKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           GKL  A  L   + D  DT   N +I  Y+K    + A+ +F++MP KD+ S+N++L+  
Sbjct: 124 GKLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGY 183

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            ++  +  A + F+ M ERNVVSWN +++  V++G    A  ++ K+ N    P  ++  
Sbjct: 184 TQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPN----PNAVSWV 239

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++         +   R     +      KN+   NA+++ Y +      AV +F++M   
Sbjct: 240 TMLCGLAKYGKMAEARELFDRMP----SKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHK 295

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++T +++G  +  ++ EA +++  M  K ++  +  +S +          +++    
Sbjct: 296 DSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGL----------IQNGRID 345

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           ++D  FSR +    V C              NS++  Y+++G MD A  +F  +P ++ V
Sbjct: 346 EADQMFSR-IGAHDVVCW-------------NSMIAGYSRSGRMDEALNLFRQMPIKNSV 391

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SWN MI+GY Q  Q  +A E+ Q M+                                  
Sbjct: 392 SWNTMISGYAQAGQMDRATEIFQAMR---------------------------------- 417

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
              ++ SWN++++ + Q+  + +A+K    M   G KPD++T A  LS+CA +  L+ G 
Sbjct: 418 -EKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGN 476

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           Q+H   LK+    D +V + LI +Y+KC R + AE+VF  I  +D++ WNS+I+G +LN 
Sbjct: 477 QLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNG 536

Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
              +AF  F+QM    + P + +F  +LS+C+    + QG  +   + +D      F   
Sbjct: 537 YANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIED------FAIE 590

Query: 545 ALIEMYCKCGDIYG 558
            L E Y    D+ G
Sbjct: 591 PLAEHYSCLVDLLG 604



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 159/338 (47%), Gaps = 24/338 (7%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           D    N +I  YS+      A +LF +MP K+  SWN ++S   ++  ++ A ++F  M 
Sbjct: 358 DVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMR 417

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
           E+N+VSWN+LI+  ++N L   AL     M  EG  P   T A    A   L  ++ G +
Sbjct: 418 EKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQ 477

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
            H  ++K G   +++V NAL+++YAKCG  + A  VF ++   + +++ +++SG A    
Sbjct: 478 LHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGY 537

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDNKFSRNVHGQQVH 260
             +A + F  M  + V  D V+   +L  C+  G   +  D+F      F+     +   
Sbjct: 538 ANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYS 597

Query: 261 CLTIKLG----------------FEADLHLSNSLLDMYAKNGDMD----SAEVIFSNLPE 300
           CL   LG                 +A+  L  SLL     + +++    +AE +F   P 
Sbjct: 598 CLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPH 657

Query: 301 RS--VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
            +   ++ + M A  G +++  + + +L R K  G +P
Sbjct: 658 NASNYITLSNMHAEAG-RWEEVERVRMLMRGKRAGKQP 694


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 205/607 (33%), Positives = 320/607 (52%), Gaps = 53/607 (8%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYA--KCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
           ++ H  +IK GL   ++  + L+   A  + G   +A+ +F  + EPN   + +M+ GL+
Sbjct: 46  KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
            +     AL  F  MI   V  +S +   +L  CA+     E                G+
Sbjct: 106 MSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHE----------------GK 149

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           Q+H   +KLGF +D+ +  SL++MYA++G+M++A+++F     R  +S+  +IAGY    
Sbjct: 150 QIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYA--- 206

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                                             G +   R++FD MP   V SWNAM++
Sbjct: 207 --------------------------------LWGYMDRARQLFDEMPVKDVVSWNAMIA 234

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y+Q    KEA+ LF +M+   V P+ +T+  +LS+CA    L+ G  + +         
Sbjct: 235 GYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCS 294

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           +  + + LI +YSKC   + A  +F  + E D++ WN MI G +      EA   F++M 
Sbjct: 295 NLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREML 354

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
            + + PT+ +F ++L SCA L +   G+ +HA I K+       + ++LI++Y KCG+I 
Sbjct: 355 ASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIV 414

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            ARQ FD M  K+  +WN MI G A +G  D+A  L+  M + G++P++ITFV IL+AC 
Sbjct: 415 AARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACK 474

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           H+GLVD+G + F+SM  D+ + P   HY CMID LGRAG F EAE L+  M  K D  IW
Sbjct: 475 HAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIW 534

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
             LL +CR H  V L +  AE LF L+P N   Y LL+NIY+  G+WDD+  +R  +++ 
Sbjct: 535 GSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDR 594

Query: 738 CIVKDPA 744
            + K P 
Sbjct: 595 GMKKVPG 601



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 213/425 (50%), Gaps = 24/425 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HAH+L+ G   D F+   LI +Y++    ++AQ +FD+   +D  S+ A+++    
Sbjct: 148 GKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYAL 207

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              ++ A +LFDEMP ++VVSWN +I+   + G  ++AL ++  M      P   T+ SV
Sbjct: 208 WGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSV 267

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      ++ G      +   GL  N+ + NAL+ +Y+KCG  + A  +F++M E + 
Sbjct: 268 LSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDV 327

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++  M+ G        EAL +FR M+   V    ++  S+L  CA  G     D+    
Sbjct: 328 ISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGA---IDL---- 380

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ +H    K        LS SL+D+YAK G++ +A  +F  +  +S+ SW
Sbjct: 381 ---------GKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASW 431

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N MI G     Q+ KA EL  +M S G EP+E+T + +L AC  +G +  G++ F SM  
Sbjct: 432 NAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQ 491

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               SP    +  M+    ++   +EA  L + M+   VKPD      +L +C   G +E
Sbjct: 492 DYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNME---VKPDGAIWGSLLGACRDHGRVE 548

Query: 422 SGKQV 426
            G+ V
Sbjct: 549 LGELV 553



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 217/491 (44%), Gaps = 111/491 (22%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +HAHI++ GL +  F  ++LIE                              SA  +S
Sbjct: 46  KQIHAHIIKTGLHNTLFALSKLIEF-----------------------------SAVSRS 76

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            D+ +A  LF+ + E N+  WN++I  L  +     AL  + +M   G  P   T   + 
Sbjct: 77  GDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLL 136

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K+   L     G++ H  V+K+G   ++++  +L+++YA+ G   +A  VF++ +  + +
Sbjct: 137 KSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAI 196

Query: 188 TFTAM-------------------------------MSGLAKTDRVVEALEMFRLMIRKA 216
           +FTA+                               ++G A+  R  EAL +F  M +  
Sbjct: 197 SFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKAN 256

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  +  ++ SVL  CA+       D+             G  +       G  ++L L N
Sbjct: 257 VPPNESTIVSVLSACAQSNA---LDL-------------GNSMRSWIEDRGLCSNLKLVN 300

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+DMY+K GD+ +A  +F ++ ER V+SWNVMI GY       +A+ L + M + G EP
Sbjct: 301 ALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEP 360

Query: 337 DEVTSINMLVAC-----------------------------------VRSGDIKTGREMF 361
            E+T +++L +C                                    + G+I   R++F
Sbjct: 361 TEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVF 420

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           D M   S++SWNAM+   +      +A +LF +M   G++P+  T   ILS+C   G+++
Sbjct: 421 DGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVD 480

Query: 422 SGKQVHAASLK 432
            G+Q  ++ ++
Sbjct: 481 LGQQFFSSMVQ 491



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 164/308 (53%), Gaps = 44/308 (14%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL--AERVFHRIPE 467
           +LS C +   + + KQ+HA  +KT  H   +  S LI   +  +  ++  A  +F+ I E
Sbjct: 35  LLSKCQS---IRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEE 91

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            ++  WNSMI GLS++     A +FF +M  + + P  ++F  +L SCAKL+S+ +G+Q+
Sbjct: 92  PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGD---------------------------IYG-- 558
           HA + K G+V+D+F+ ++LI MY + G+                           ++G  
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211

Query: 559 --ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             ARQ FD M  K+ V+WN MI GYAQ G   EA+ L++DM  + V P++ T V++L+AC
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC 271

Query: 617 SHSGLVDVGVEIFNSMQL---DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
           + S  +D+G    NSM+    D G+   L     +ID   + G    A  L D+M  + D
Sbjct: 272 AQSNALDLG----NSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM-LERD 326

Query: 674 PVIWEVLL 681
            + W V++
Sbjct: 327 VISWNVMI 334



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 17/239 (7%)

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM--YCKCGDIYGARQFFDMMHG 568
           +LS C  + +    +Q+HA I K G  N +F  S LIE     + GDI  A   F+ +  
Sbjct: 35  LLSKCQSIRTF---KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEE 91

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            N   WN MI G + +     A+  +  MI SGV+P+  TF  +L +C+       G +I
Sbjct: 92  PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
              +     V  +  H T +I+   ++G  + A+++ D+   + D + +  L++   L  
Sbjct: 152 HAHVLKLGFVSDVFIH-TSLINMYAQSGEMNNAQLVFDQSNFR-DAISFTALIAGYALWG 209

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGR-------WDDLRAVRELMSENCIV 740
            +  A++  +E   +  K+   ++ +   Y+ +GR       ++D+R      +E+ IV
Sbjct: 210 YMDRARQLFDE---MPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIV 265


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 236/748 (31%), Positives = 366/748 (48%), Gaps = 96/748 (12%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH   ++ G   + FL N LI +Y +  +  SAQ                          
Sbjct: 121 LHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ-------------------------- 154

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                KLFDEM  RN+V+W  LIS   +NG  ++A + +  M   GF+P H    S  +A
Sbjct: 155 -----KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRA 209

Query: 130 --STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC-GWTKHAVPVFEEMSEPNE 186
              +     + G + HGL+ K     ++ V N L+S+Y  C      A  VF+ +   N 
Sbjct: 210 CQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNS 269

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE---SDVF 243
           +++ +++S  ++    V A ++F  M                    +EG G     +D F
Sbjct: 270 ISWNSIISVYSRRGDAVSAYDLFSSM-------------------QKEGLGFSFKPNDAF 310

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
           ++          G++VH   I+ G  +  + + N L++MYAK+G +  A  +F  + E+ 
Sbjct: 311 SEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKD 370

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
            VSWN +I+G  Q   S  A                                    EMF 
Sbjct: 371 SVSWNSLISGLDQNECSEDAA-----------------------------------EMFS 395

Query: 363 SMPSPSVSSWNAMLSSYSQSENH-KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
            MP     SWN+++ + S SE    +A+K F +M   G    R T   ILS+ +++ + E
Sbjct: 396 LMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHE 455

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGL 480
              Q+HA  LK     D  + + L+  Y KC      E++F R+ E  D V WNSMI+G 
Sbjct: 456 VSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGY 515

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
             N L  +A      M Q       F+FAT+LS+CA +++  +G +VHA   +    +D+
Sbjct: 516 IHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDV 575

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            VGSAL++MY KCG I  A +FF++M  +N  +WN MI GYA++G+G++A++L+  M+  
Sbjct: 576 VVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD 635

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G  PD +TFV +L+ACSH G V+ G E F SM   + + P ++H++CM+D LGRAG   E
Sbjct: 636 GQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDE 695

Query: 661 AEMLIDEMPCKDDPVIWEVLLSS-CRLHA-NVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
               I+ MP K + +IW  +L + CR +  N  L +RAAE L  L+P+N+  Y LLAN+Y
Sbjct: 696 VGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMY 755

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +S  +W+D+   R  M E  + K+   S
Sbjct: 756 ASGEKWEDVAKARTAMKEAAVKKEAGCS 783



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 214/416 (51%), Gaps = 27/416 (6%)

Query: 7   GKLLHAHILRNGLFDDTF-LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ +HAH++R GL D+   + N L+ +Y+K      A  +F+ M  KD  SWN+++S   
Sbjct: 323 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 382

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLE-EKALSVYNKMSNEGFVPTHITLA 124
           +++  E A ++F  MPE + VSWN++I AL  +     +A+  + +M   G+  + +T  
Sbjct: 383 QNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFI 442

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++  A ++L   E   + H LV+K  L  +  + NALLS Y KCG       +F  MSE 
Sbjct: 443 NILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSET 502

Query: 185 -NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            +EV++ +M+SG    + + +A+++   M++K   +DS + +++L  CA           
Sbjct: 503 RDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACA----------- 551

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
             S     R   G +VH   I+   E+D+ + ++L+DMY+K G +D A   F  +P R+V
Sbjct: 552 --SVATLER---GMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNV 606

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
            SWN MI+GY +     KA++L  RM   G  PD VT + +L AC   G ++ G E F S
Sbjct: 607 YSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKS 666

Query: 364 MP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           M      SP V  ++ M+    ++    E       M    +KP+      +L +C
Sbjct: 667 MSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMP---MKPNVLIWRTVLGAC 719



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 230/514 (44%), Gaps = 92/514 (17%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +++H  +IK GF  +L LSN+L+++Y + GD+ SA+ +F  +  R++V+W  +I+GY Q 
Sbjct: 119 RELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQN 178

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG------------------------ 352
            +  +A    + M   GF P+     + L AC  SG                        
Sbjct: 179 GKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVV 238

Query: 353 --------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                              R +FD +   +  SWN+++S YS+  +   A  LF  MQ  
Sbjct: 239 VCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKE 298

Query: 399 GV----KPDRTTLAIILSSCAAMGILE----SGKQVHAASLKTASHIDNYVA--SGLIGI 448
           G+    KP+         + +   +LE     G++VHA  ++T  + DN VA  +GL+ +
Sbjct: 299 GLGFSFKPN--------DAFSEFSVLEEGRRKGREVHAHVIRTGLN-DNKVAIGNGLVNM 349

Query: 449 YSK-------CQRNEL------------------------AERVFHRIPELDIVCWNSMI 477
           Y+K       C   EL                        A  +F  +PE D V WNS+I
Sbjct: 350 YAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVI 409

Query: 478 AGLSLNSLDI-EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
             LS +   + +A  +F QM +     ++ +F  +LS+ + LS      Q+HA + K   
Sbjct: 410 GALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCL 469

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
            +D  +G+AL+  Y KCG++    + F  M   ++ V+WN MI GY  N    +A+ L  
Sbjct: 470 SDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVW 529

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
            M+  G + D  TF  IL+AC+    ++ G+E+ ++  +   +E  +   + ++D   + 
Sbjct: 530 FMMQKGQRLDSFTFATILSACASVATLERGMEV-HACGIRACLESDVVVGSALVDMYSKC 588

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           G    A    + MP + +   W  ++S    H +
Sbjct: 589 GRIDYASRFFELMPLR-NVYSWNSMISGYARHGH 621



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 179/410 (43%), Gaps = 45/410 (10%)

Query: 315 QKYQ----STKAIEL-LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSV 369
            +YQ    S +A EL LQ +K  GF  +   S  ++   VR GD+ + +++FD M + ++
Sbjct: 107 NRYQGSCCSEEARELHLQSIKY-GFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNL 165

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI--LESGKQVH 427
            +W  ++S Y+Q+    EA   FR+M   G  P+       L +C   G    + G Q+H
Sbjct: 166 VTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIH 225

Query: 428 AASLKTASHIDNYVASGLIGIYSKC-QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
               KT    D  V + LI +Y  C      A  VF  I   + + WNS+I+  S     
Sbjct: 226 GLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDA 285

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS-FQGRQVHAQIEKDGYV-NDIFVGS 544
           + A+  F  M Q E     F      S  + L     +GR+VHA + + G   N + +G+
Sbjct: 286 VSAYDLFSSM-QKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGN 344

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD---------------- 588
            L+ MY K G I  A   F++M  K++V+WN +I G  QN   +                
Sbjct: 345 GLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVS 404

Query: 589 ----------------EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
                           +AV+ +  M+  G     +TF+ IL+A S   L +V  +I +++
Sbjct: 405 WNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQI-HAL 463

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            L + +         ++ C G+ G  +E E +   M    D V W  ++S
Sbjct: 464 VLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMIS 513



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 30/232 (12%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H     +HA +L+  L DDT + N L+  Y KC   +  + +F +M              
Sbjct: 454 HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSET----------- 502

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                              R+ VSWN++IS  + N L  KA+ +   M  +G      T 
Sbjct: 503 -------------------RDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTF 543

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A++  A  ++  +E G   H   I+  L+ ++ V +AL+ +Y+KCG   +A   FE M  
Sbjct: 544 ATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPL 603

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            N  ++ +M+SG A+     +AL++F  M+      D V+   VL  C+  G
Sbjct: 604 RNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVG 655



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 2/130 (1%)

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           ++ +  +F ++++       S + R++H Q  K G+V ++F+ + LI +Y + GD+  A+
Sbjct: 95  LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 154

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           + FD M  +N VTW  +I GY QNG  DEA   ++DM+ +G  P+   F + L AC  SG
Sbjct: 155 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214

Query: 621 L--VDVGVEI 628
                +GV+I
Sbjct: 215 PSGCKLGVQI 224


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 215/696 (30%), Positives = 353/696 (50%), Gaps = 54/696 (7%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S+N +I+ L   G     L  Y+ M +    P   T  S+ KA T+L    HG   H  V
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           I  G   + Y+A +L++ Y+K G  + A  VF+ M + N V +T M+    +      A 
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            M+ +M R+ +   SV++            G+ S V           VH Q +H   I+ 
Sbjct: 135 SMYNIMRRQGIQPSSVTM-----------LGLLSGVLEL--------VHLQCLHACVIQY 175

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           GF +D+ L+NS+L++Y K G ++ A+ +F  +  R V+SWN +++GY Q     + ++LL
Sbjct: 176 GFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLL 235

Query: 327 QRMKSCGFEPDEVTSINMLVAC-----------------------------------VRS 351
            RMK+ G EPD+ T  +++ A                                    ++ 
Sbjct: 236 IRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKC 295

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           G++ +   +F+ M    V SW AM+S   Q++    A+ +FR M    V P   T+A +L
Sbjct: 296 GNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVL 355

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
           ++CA +G    G  VH   L+    +D    + L+ +Y+KC   E +  VF R+   DIV
Sbjct: 356 AACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIV 415

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
            WN++++G + N    +A + F +MR+    P   +  ++L +CA + +  QG+ +H  +
Sbjct: 416 SWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFV 475

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
            K      I + +AL++MY KCGD+  A++ FD M  ++ V+W+ +I GY  +G G+ A+
Sbjct: 476 TKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETAL 535

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
           R+Y D + +G++P+ + +++IL+ACSH+GLVD G+  F+SM  D G+EP L+H  C++D 
Sbjct: 536 RMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDL 595

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           L RAG   EA      M  K    +  +LL +CR   NV L    A E+  L P N+  Y
Sbjct: 596 LSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNY 655

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
             LA+ Y+S+ RWD +  V   M    + K P +S 
Sbjct: 656 VQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSF 691



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/602 (24%), Positives = 267/602 (44%), Gaps = 86/602 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G   H  ++ +G   D+++   LI  YSK  +  SA+                       
Sbjct: 67  GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSAR----------------------- 103

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+FD M +RNVV W  +I    R G  + A S+YN M  +G  P+ +T+  +
Sbjct: 104 --------KVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGL 155

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               + +L++ H +  H  VI+ G   ++ +AN++L++Y KCG  + A  +FE M   + 
Sbjct: 156 L---SGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDV 212

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ +++SG A+   + E L++   M    +  D  +  S++   A +            
Sbjct: 213 ISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQ------------ 260

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S+   G+ VH   ++ G E D H+  SL+ MY K G+++SA  IF  +  + V+SW
Sbjct: 261 ----SKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISW 316

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
             MI+G  Q   +  A+ + +RM      P   T  ++L AC   G    G         
Sbjct: 317 TAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILR 376

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +FD M    + SWNA++S ++Q+ +  +A+ L
Sbjct: 377 QRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLL 436

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F EM+    +PD  T+  +L +CA++G L  GK +H    K+       + + L+ +YSK
Sbjct: 437 FNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSK 496

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     A++ F R+P+ D+V W+S+IAG   +     A   +       + P    + ++
Sbjct: 497 CGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSI 556

Query: 512 LSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           LS+C+      QG      + KD G    +   + ++++  + G +  A  F+  M  K 
Sbjct: 557 LSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKP 616

Query: 571 TV 572
           ++
Sbjct: 617 SM 618



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 205/426 (48%), Gaps = 57/426 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H HILR GL  D+ +   LI +Y KC N +SA                        
Sbjct: 266 GKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSA------------------------ 301

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  +++F+ M  ++V+SW  +IS LV+N   + A++V+ +M     +P+  T+ASV
Sbjct: 302 -------FRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASV 354

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L     G   HG +++  +  +I   N+L+++YAKCG  + +  VF+ MS  + 
Sbjct: 355 LAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDI 414

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A++SG A+   + +AL +F  M +     DS+++ S+L  CA  G           
Sbjct: 415 VSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGA---------- 464

Query: 247 DNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                  +H G+ +H    K      + +  +L+DMY+K GD+ SA+  F  +P++ +VS
Sbjct: 465 -------LHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVS 517

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W+ +IAGYG   +   A+ +       G +P+ V  +++L AC  +G +  G   F SM 
Sbjct: 518 WSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMT 577

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P +     ++   S++   +EA   ++ M     KP    L I+L +C   G +
Sbjct: 578 KDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMF---PKPSMDVLGILLDACRTTGNV 634

Query: 421 ESGKQV 426
           E G  V
Sbjct: 635 ELGDIV 640



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 160/320 (50%), Gaps = 5/320 (1%)

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
           S  +P+  S+NA+++  S +    + +  +  M      PD  T   ++ +C ++ +   
Sbjct: 7   SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           G   H   +      D+Y+A+ LI  YSK   N+ A +VF  + + ++V W +MI   + 
Sbjct: 67  GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
                 AF  +  MR+  + P+  +   +LS   +L      + +HA + + G+ +D+ +
Sbjct: 127 AGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLEL---VHLQCLHACVIQYGFGSDVAL 183

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            ++++ +YCKCG +  A+  F++M  ++ ++WN ++ GYAQ G   E ++L   M   G+
Sbjct: 184 ANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGI 243

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
           +PD  TF ++++A +    + VG ++ +   L  G+E      T +I    + G+ + A 
Sbjct: 244 EPDQQTFGSLVSAAAMQSKLGVG-KMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAF 302

Query: 663 MLIDEMPCKDDPVIWEVLLS 682
            + + M  K D + W  ++S
Sbjct: 303 RIFEGMMHK-DVISWTAMIS 321


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 190/591 (32%), Positives = 321/591 (54%), Gaps = 53/591 (8%)

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           M+ G AK    +     FR +IR     D+ +L  V+  C                 +  
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC-----------------RDL 43

Query: 252 RNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
           +N+  G+ +H +  K G + D  +  +L+DMY K  +++ A  +F  + ER +V+W VMI
Sbjct: 44  KNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMI 103

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD----------------- 353
            GY +  ++ +++ L ++M+  G  PD+V  + ++ AC + G                  
Sbjct: 104 GGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ 163

Query: 354 ------------------IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                             +++ RE+FD M   +V SW+AM+++Y      ++A+ LFR M
Sbjct: 164 LDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMM 223

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
              G+ PD+ TLA +L +C+ +  L+ G+ +H    K    +D++V + L+ +Y KC+  
Sbjct: 224 LSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREI 283

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
           E A  +F ++PE D+V W  MI G +      E+ + F +MR+  + P + +  TV+ +C
Sbjct: 284 EDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFAC 343

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           AKL +  + R +   I++  +  D+ +G+A+I+M+ KCG +  AR+ FD M  KN ++W+
Sbjct: 344 AKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWS 403

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI  Y  +G G +A+ L+  M+ SG+ P+ IT V++L ACSH+GLV+ G+  F+ M  D
Sbjct: 404 AMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWED 463

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           + V   + HYTC++D LGRAG   EA  LI+ M  + D  +W   L +CR H +V LA++
Sbjct: 464 YSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEK 523

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           AA  L  L P+N   Y LL+NIY++ GRW+D+   R+LMS+  + K P ++
Sbjct: 524 AATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWT 574



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/544 (24%), Positives = 259/544 (47%), Gaps = 61/544 (11%)

Query: 91  LISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG 150
           ++    + G        + ++   G  P + TL  V +A   L +++ GR  H +V K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           LD + +V  AL+ +Y KC   + A  +F++M E + VT+T M+ G A+  +  E+L +F 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            M  + V  D V++ +V+  CA+ G   ++ +    D+   R               F+ 
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARII---DDYIQRK-------------KFQL 164

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           D+ L  +++DMYAK G ++SA  IF  + E++V+SW+ MIA YG   Q  KA++L + M 
Sbjct: 165 DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMML 224

Query: 331 SCGFEPDEVTSINMLVACV-----------------------------------RSGDIK 355
           S G  PD++T  ++L AC                                    +  +I+
Sbjct: 225 SSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIE 284

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
             R +FD MP   + +W  M+  Y++  N  E++ LF +M+  GV PD+  +  ++ +CA
Sbjct: 285 DARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACA 344

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
            +G +   + +     +    +D  + + +I +++KC   E A  +F R+ E +++ W++
Sbjct: 345 KLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSA 404

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MIA    +    +A   F  M ++ + P + +  ++L +C+      +G +  + + +D 
Sbjct: 405 MIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDY 464

Query: 536 YVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
            V  D+   + ++++  + G +  A +  + M    TV  +E + G         A R +
Sbjct: 465 SVRADVKHYTCVVDLLGRAGRLDEALKLIESM----TVEKDEGLWGAFLG-----ACRTH 515

Query: 595 KDMI 598
           KD++
Sbjct: 516 KDVV 519



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 214/453 (47%), Gaps = 84/453 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+H  + + GL  D F+C  L+++Y KC     A+ LF                    
Sbjct: 49  GRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLF-------------------- 88

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                      D+M ER++V+W  +I      G   ++L ++ KM  EG VP  + + +V
Sbjct: 89  -----------DKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 137

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L  +   R     + +     ++ +  A++ +YAKCG  + A  +F+ M E N 
Sbjct: 138 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNV 197

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           ++++AM++      +  +AL++FR+M+   +  D ++L+S+L  C        SD+    
Sbjct: 198 ISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC--------SDL---- 245

Query: 247 DNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +N+  G+ +H +  K G + D  +  +L+DMY K  +++ A  +F  +PER +V+
Sbjct: 246 -----KNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD------------ 353
           W VMI GY +   + +++ L  +M+  G  PD+V  + ++ AC + G             
Sbjct: 301 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 360

Query: 354 -----------------------IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                  +++ RE+FD M   +V SW+AM+++Y      ++A+ 
Sbjct: 361 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 420

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           LF  M   G+ P++ TL  +L +C+  G++E G
Sbjct: 421 LFPMMLRSGILPNKITLVSLLYACSHAGLVEEG 453



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 198/390 (50%), Gaps = 28/390 (7%)

Query: 34  SKCNNTHSAQHLFDKMPHK----DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWN 89
           +K    H A+ + D +  K    D+    A++    K   +E A ++FD M E+NV+SW+
Sbjct: 142 AKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWS 201

Query: 90  NLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI 149
            +I+A   +G   KAL ++  M + G +P  ITLAS+  A + L +++ GR  H +V K 
Sbjct: 202 AMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKF 261

Query: 150 GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
           GLD + +V  AL+ +Y KC   + A  +F++M E + VT+T M+ G A+     E+L +F
Sbjct: 262 GLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLF 321

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
             M  + V  D V++ +V+  CA+ G   ++      D+   R               F+
Sbjct: 322 DKMREEGVVPDKVAMVTVVFACAKLGAMHKARTI---DDYIQRK-------------KFQ 365

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
            D+ L  +++DM+AK G ++SA  IF  + E++V+SW+ MIA YG   Q  KA++L   M
Sbjct: 366 LDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMM 425

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-----PSPSVSSWNAMLSSYSQSEN 384
              G  P+++T +++L AC  +G ++ G   F  M         V  +  ++    ++  
Sbjct: 426 LRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGR 485

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
             EA+KL   M    V+ D       L +C
Sbjct: 486 LDEALKLIESMT---VEKDEGLWGAFLGAC 512


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 203/625 (32%), Positives = 323/625 (51%), Gaps = 52/625 (8%)

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKA 216
           +N  L    K G   +A  +F++MS+ +E+++T ++SG    +   EAL +F+ M +   
Sbjct: 52  SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           + ID   LS      A + CG+ SDV            +G+ +H   +K G    + + +
Sbjct: 112 LRIDPFILS-----LAHKACGLNSDV-----------NYGELLHGYAVKTGLVNSVFVGS 155

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +LLDMY KNG +     +F  +P R+VVSW  +I G  +   + +A+     M     E 
Sbjct: 156 ALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEY 215

Query: 337 DEVTSINMLVACVRSGDIKTGRE-----------------------------------MF 361
           D  T    L AC  SG +  GRE                                   +F
Sbjct: 216 DSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLF 275

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           + M    V SW  ++++  Q    + A++ F  M+   V P+  T A ++S CA +  +E
Sbjct: 276 EKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIE 335

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G+Q+HA  L         V + ++ +Y+KC +   +  +FH +   DIV W+++IAG S
Sbjct: 336 WGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYS 395

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
                 EAF     MR     PT+F+ A+VLS+C  ++    G+Q+HA +   G  +   
Sbjct: 396 QGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAM 455

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           V SALI MYCKCG I  A + FD     + V+W  MI+GYA++GY  E + L++ +   G
Sbjct: 456 VLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVG 515

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           ++PD +TF+ +L+ACSH+GLVD+G   FN+M   + + P  +HY CMID L RAG   +A
Sbjct: 516 LRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDA 575

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           E +I+ MP   D V+W  LL +CR+H +V   +R AE + +L+P  +  +  LANIY+S 
Sbjct: 576 EHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASK 635

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           G+W +   +R+LM    ++K+P +S
Sbjct: 636 GKWREAADIRKLMKSKGVIKEPGWS 660



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 251/580 (43%), Gaps = 59/580 (10%)

Query: 49  MPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY 108
           +   D+   N  L    K+  L  A ++FD+M +++ +SW  LIS  V      +AL ++
Sbjct: 44  ISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLF 103

Query: 109 NKMSNE-GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
             M  E G       L+   KA     DV +G   HG  +K GL  +++V +ALL +Y K
Sbjct: 104 KNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTK 163

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
            G       VF EM   N V++TA+++GL +     EAL  F  M R  V  DS + +  
Sbjct: 164 NGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIA 223

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           L  CA  G               + N +G+++H   +K GF+    ++N+L  MY K G 
Sbjct: 224 LKACADSG---------------ALN-YGREIHAQAMKKGFDVSSFVANTLATMYNKCGK 267

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           ++    +F  +  R VVSW  +I    Q  Q   A++   RM+     P+E T   ++  
Sbjct: 268 LEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISG 327

Query: 348 CVRSGDIKTGREM-----------------------------------FDSMPSPSVSSW 372
           C     I+ G ++                                   F  M    + SW
Sbjct: 328 CANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSW 387

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           + +++ YSQ  +  EA +L   M+  G KP    LA +LS+C  M ILE GKQ+HA  L 
Sbjct: 388 STIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLS 447

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                   V S LI +Y KC   E A R+F      DIV W +MI G + +    E    
Sbjct: 448 IGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDL 507

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYC 551
           F+++ +  + P   +F  VLS+C+       G R  +A  +K            +I++ C
Sbjct: 508 FEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLC 567

Query: 552 KCGDIYGARQFFDMM-HGKNTVTWNEM-----IHGYAQNG 585
           + G +  A    + M   ++ V W+ +     +HG  + G
Sbjct: 568 RAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERG 607



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 234/490 (47%), Gaps = 48/490 (9%)

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           ++  V  +S++  S+N+H             + DL  SN  L    K G + +A  +F  
Sbjct: 25  IDLQVLERSNDNLSQNIH----------FISQTDLPESNKQLKELVKTGHLGNARRMFDK 74

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-----------------KSCGFEPDE-- 338
           + ++  +SW  +I+GY     S++A+ L + M                 K+CG   D   
Sbjct: 75  MSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNY 134

Query: 339 -------------VTSI----NMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                        V S+     +L    ++G I  GR +F  MP  +V SW A+++   +
Sbjct: 135 GELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVR 194

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +  +KEA+  F EM    V+ D  T AI L +CA  G L  G+++HA ++K    + ++V
Sbjct: 195 AGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFV 254

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
           A+ L  +Y+KC + E    +F ++   D+V W ++I  L     +  A   F +MR++++
Sbjct: 255 ANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDV 314

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P +++FA V+S CA L+    G Q+HA I   G    + V ++++ MY KCG +  +  
Sbjct: 315 SPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSV 374

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F  M  ++ V+W+ +I GY+Q G+  EA  L   M   G KP +    ++L+AC +  +
Sbjct: 375 IFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAI 434

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           ++ G ++ ++  L  G+E      + +I+   + G   EA  + D     DD V W  ++
Sbjct: 435 LEHGKQL-HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAE-NDDIVSWTAMI 492

Query: 682 SSCRLHANVR 691
           +    H   R
Sbjct: 493 NGYAEHGYSR 502



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 233/508 (45%), Gaps = 84/508 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+LLH + ++ GL +  F+ + L+++Y+K       +                       
Sbjct: 135 GELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR----------------------- 171

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++F EMP RNVVSW  +I+ LVR G  ++AL  +++M          T A  
Sbjct: 172 --------RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIA 223

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA      + +GR  H   +K G D + +VAN L ++Y KCG  ++ + +FE+MS  + 
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDV 283

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T +++ L +  +   A++ F  M    VS +  + ++V+  CA              
Sbjct: 284 VSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCA-------------- 329

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +R   G+Q+H L + LG  A L + NS++ MYAK G + S+ VIF  +  R +VSW
Sbjct: 330 --NLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSW 387

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           + +IAGY Q    ++A ELL  M+  G +P E    ++L AC                  
Sbjct: 388 STIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLS 447

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G I+    +FD+  +  + SW AM++ Y++    +E I L
Sbjct: 448 IGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDL 507

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESG-KQVHAASLKTASHIDNYVASGLIGIYS 450
           F ++   G++PD  T   +LS+C+  G+++ G +  +A S K            +I +  
Sbjct: 508 FEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLC 567

Query: 451 KCQRNELAERVFHRIP-ELDIVCWNSMI 477
           +  R   AE +   +P   D V W++++
Sbjct: 568 RAGRLSDAEHMIEAMPFHRDDVVWSTLL 595



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 194/425 (45%), Gaps = 55/425 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA  ++ G    +F+ N L  +Y+KC                              
Sbjct: 236 GREIHAQAMKKGFDVSSFVANTLATMYNKCGK---------------------------- 267

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              LE+   LF++M  R+VVSW  +I+ LV+ G EE A+  + +M      P   T A+V
Sbjct: 268 ---LEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAV 324

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 L  +E G + H L++ +GL  ++ V N+++++YAKCG    +  +F EM+  + 
Sbjct: 325 ISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDI 384

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++ +++G ++   V EA E+   M  +       +L+SVL  C               
Sbjct: 385 VSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACG-------------- 430

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +   HG+Q+H   + +G E    + ++L++MY K G ++ A  IF       +VSW
Sbjct: 431 --NMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSW 488

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             MI GY +   S + I+L +++   G  PD VT I +L AC  +G +  G   F++M  
Sbjct: 489 TAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSK 548

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               SPS   +  M+    ++    +A  +   M F     D    + +L +C   G +E
Sbjct: 549 KYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFH---RDDVVWSTLLRACRVHGDVE 605

Query: 422 SGKQV 426
            G++ 
Sbjct: 606 RGRRT 610


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 215/696 (30%), Positives = 353/696 (50%), Gaps = 54/696 (7%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S+N +I+ L   G     L  Y+ M +    P   T  S+ KA T+L    HG   H  V
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           I  G   + Y+A +L++ Y+K G  + A  VF+ M + N V +T M+    +      A 
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            M+ +M R+ +   SV++            G+ S V           VH Q +H   I+ 
Sbjct: 135 SMYNIMRRQGIQPSSVTM-----------LGLLSGVLEL--------VHLQCLHACVIQY 175

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           GF +D+ L+NS+L++Y K G ++ A+ +F  +  R V+SWN +++GY Q     + ++LL
Sbjct: 176 GFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLL 235

Query: 327 QRMKSCGFEPDEVTSINMLVAC-----------------------------------VRS 351
            RMK+ G EPD+ T  +++ A                                    ++ 
Sbjct: 236 IRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKC 295

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           G++ +   +F+ M    V SW AM+S   Q++    A+ +FR M    V P   T+A +L
Sbjct: 296 GNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVL 355

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
           ++CA +G    G  VH   L+    +D    + L+ +Y+KC   E +  VF R+   DIV
Sbjct: 356 AACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIV 415

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
            WN++++G + N    +A + F +MR+    P   +  ++L +CA + +  QG+ +H  +
Sbjct: 416 SWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFV 475

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
            K      I + +AL++MY KCGD+  A++ FD M  ++ V+W+ +I GY  +G G+ A+
Sbjct: 476 TKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETAL 535

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
           R+Y D + +G++P+ + +++IL+ACSH+GLVD G+  F+SM  D G+EP L+H  C++D 
Sbjct: 536 RMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDL 595

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           L RAG   EA      M  K    +  +LL +CR   NV L    A E+  L P N+  Y
Sbjct: 596 LSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNY 655

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
             LA+ Y+S+ RWD +  V   M    + K P +S 
Sbjct: 656 VQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSF 691



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 149/602 (24%), Positives = 267/602 (44%), Gaps = 86/602 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G   H  ++ +G   D+++   LI  YSK  +  SA+                       
Sbjct: 67  GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSAR----------------------- 103

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+FD M +RNVV W  +I    R G  + A S+YN M  +G  P+ +T+  +
Sbjct: 104 --------KVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGL 155

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               + +L++ H +  H  VI+ G   ++ +AN++L++Y KCG  + A  +FE M   + 
Sbjct: 156 L---SGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDV 212

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ +++SG A+   + E L++   M    +  D  +  S++   A +            
Sbjct: 213 ISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQ------------ 260

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S+   G+ VH   ++ G E D H+  SL+ MY K G+++SA  IF  +  + V+SW
Sbjct: 261 ----SKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISW 316

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
             MI+G  Q   +  A+ + +RM      P   T  ++L AC   G    G         
Sbjct: 317 TAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILR 376

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +FD M    + SWNA++S ++Q+ +  +A+ L
Sbjct: 377 QRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLL 436

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F EM+    +PD  T+  +L +CA++G L  GK +H    K+       + + L+ +YSK
Sbjct: 437 FNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSK 496

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     A++ F R+P+ D+V W+S+IAG   +     A   +       + P    + ++
Sbjct: 497 CGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSI 556

Query: 512 LSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           LS+C+      QG      + KD G    +   + ++++  + G +  A  F+  M  K 
Sbjct: 557 LSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKP 616

Query: 571 TV 572
           ++
Sbjct: 617 SM 618



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 205/426 (48%), Gaps = 57/426 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H HILR GL  D+ +   LI +Y KC N +SA                        
Sbjct: 266 GKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSA------------------------ 301

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  +++F+ M  ++V+SW  +IS LV+N   + A++V+ +M     +P+  T+ASV
Sbjct: 302 -------FRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASV 354

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L     G   HG +++  +  +I   N+L+++YAKCG  + +  VF+ MS  + 
Sbjct: 355 LAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDI 414

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A++SG A+   + +AL +F  M +     DS+++ S+L  CA  G           
Sbjct: 415 VSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGA---------- 464

Query: 247 DNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                  +H G+ +H    K      + +  +L+DMY+K GD+ SA+  F  +P++ +VS
Sbjct: 465 -------LHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVS 517

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W+ +IAGYG   +   A+ +       G +P+ V  +++L AC  +G +  G   F SM 
Sbjct: 518 WSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMT 577

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P +     ++   S++   +EA   ++ M     KP    L I+L +C   G +
Sbjct: 578 KDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRM---FPKPSMDVLGILLDACRTTGNV 634

Query: 421 ESGKQV 426
           E G  V
Sbjct: 635 ELGDIV 640



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 159/320 (49%), Gaps = 5/320 (1%)

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
           S  +P+  S+NA+++  S +    + +  +  M      PD  T   ++ +C ++ +   
Sbjct: 7   SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           G   H   +      D+Y+A+ LI  YSK   N+ A +VF  + + ++V W +MI   + 
Sbjct: 67  GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
                 AF  +  MR+  + P+  +   +LS   +L      + +HA + + G+ +D+ +
Sbjct: 127 AGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLEL---VHLQCLHACVIQYGFGSDVAL 183

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            ++++ +YCKCG +  A+  F++M  ++ ++WN ++ GYAQ G   E ++L   M   G+
Sbjct: 184 ANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGI 243

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
           +PD  TF ++++A +    + VG  +   + L  G+E      T +I    + G+ + A 
Sbjct: 244 EPDQQTFGSLVSAAAMQSKLGVGKMVHGHI-LRAGLEQDSHIETSLIGMYLKCGNVNSAF 302

Query: 663 MLIDEMPCKDDPVIWEVLLS 682
            + + M  K D + W  ++S
Sbjct: 303 RIFEGMMHK-DVISWTAMIS 321


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 203/647 (31%), Positives = 353/647 (54%), Gaps = 51/647 (7%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D   G+  H  +IK G   +++  N LL+ Y K      A  +F+EM + N V+F  ++ 
Sbjct: 59  DCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQ 118

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G ++  R  EA+ +F  +  +   ++    S+VL +       + S  +A+         
Sbjct: 119 GYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKL-------LVSAEWAKL-------- 163

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G  VH    KLGF++D  +  +L+D Y+  G  + A  +F  +  + +VSW  M+A Y 
Sbjct: 164 -GFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYV 222

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------------------- 349
           +     ++++L  RM+  GF+P+  T  ++L ACV                         
Sbjct: 223 ENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELF 282

Query: 350 ----------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                     +SGD+    ++F+ MP   V  W+ M++ Y+QSE  +EAI++F  M+   
Sbjct: 283 VGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGL 342

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V P++ TLA +L +CA++  L+ G Q+H   +K    ++ +V++ L+ +Y+KC R E + 
Sbjct: 343 VLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSL 402

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           ++F   P    V WN++I G        +A + FK M + ++  T+ ++++VL +CA ++
Sbjct: 403 QLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIA 462

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +   G Q+H+   K  Y  +  VG+ALI+MY KCG+I  AR  FDM+   + V+WN MI 
Sbjct: 463 ALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMIS 522

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GY+ +G   EA++ ++ M+ +  KPD +TFV IL+ACS++GL+D G   F SM  ++ +E
Sbjct: 523 GYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIE 582

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P  +HYTCM+  LGR+GH  +A  L+ E+P +   ++W  LLS+C +H +V L + +A+ 
Sbjct: 583 PCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQR 642

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +  ++P++ A + LL+NIY++  RW ++ ++R  M    I K+P  S
Sbjct: 643 VLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLS 689



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 249/499 (49%), Gaps = 51/499 (10%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+++ N +L+   K D L  A KLFDEMP+RN VS+  LI    +     +A+ +++++ 
Sbjct: 78  DLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQ 137

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            EG        ++V K   +    + G   H  V K+G D + +V  AL+  Y+ CG+ +
Sbjct: 138 GEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAE 197

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF+ +   + V++T M++   + +   E+L++F  M       ++ + +SVL  C 
Sbjct: 198 CARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACV 257

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
               G+E  VF         NV G+ VH    K  +  +L +   L+D+Y K+GD+D A 
Sbjct: 258 ----GLE--VF---------NV-GKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDAL 301

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  +P+  V+ W+ MIA Y Q  QS +AIE+  RM+     P++ T  ++L AC    
Sbjct: 302 QVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLV 361

Query: 353 DIKTGR-----------------------------------EMFDSMPSPSVSSWNAMLS 377
           D++ G                                    ++F   P+ +  SWN ++ 
Sbjct: 362 DLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIV 421

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y Q+ N ++A+ LF++M    V+    T + +L +CA +  LE G Q+H+ S+KT    
Sbjct: 422 GYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDK 481

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           +  V + LI +Y+KC   + A  VF  + E D V WN+MI+G S++ L  EA   F+ M 
Sbjct: 482 NTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESML 541

Query: 498 QNEMYPTQFSFATVLSSCA 516
           + E  P + +F  +LS+C+
Sbjct: 542 ETECKPDKVTFVGILSACS 560



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 242/520 (46%), Gaps = 87/520 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA + + G   D F+   LI+ YS C     A+ +FD + +KD+            
Sbjct: 164 GFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDM------------ 211

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                              VSW  +++  V N   E++L ++++M   GF P + T ASV
Sbjct: 212 -------------------VSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASV 252

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L     G+  HG   K    + ++V   L+ LY K G    A+ VFEEM + + 
Sbjct: 253 LKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDV 312

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           + ++ M++  A++++  EA+EMF  M R  V  +  +L+S+L  CA       S V  Q 
Sbjct: 313 IPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACA-------SLVDLQL 365

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q+HC  +K+G + ++ +SN+L+DMYAK G M+++  +FS  P  + VSW
Sbjct: 366 ---------GNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSW 416

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           N +I GY Q     KA+ L + M  C  +  EVT  ++L AC                  
Sbjct: 417 NTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVK 476

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G+IK  R +FD +      SWNAM+S YS    + EA+K 
Sbjct: 477 TIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKT 536

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIY 449
           F  M     KPD+ T   ILS+C+  G+L+ G Q +  S+     I+      + ++ + 
Sbjct: 537 FESMLETECKPDKVTFVGILSACSNAGLLDRG-QAYFKSMVEEYDIEPCAEHYTCMVWLL 595

Query: 450 SKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIE 488
            +    + A ++ H IP E  ++ W ++++   +++ D+E
Sbjct: 596 GRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHN-DVE 634



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 194/364 (53%), Gaps = 24/364 (6%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           KS D++ A ++F+EMP+ +V+ W+ +I+   ++   E+A+ ++ +M     +P   TLAS
Sbjct: 293 KSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLAS 352

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           + +A  +L+D++ G + H  V+K+GLD N++V+NAL+ +YAKCG  ++++ +F E     
Sbjct: 353 LLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCT 412

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +V++  ++ G  +     +AL +F+ M+   V    V+ SSVL  CA             
Sbjct: 413 DVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACA------------- 459

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +    G Q+H L++K  ++ +  + N+L+DMYAK G++  A ++F  L E   VS
Sbjct: 460 ---GIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVS 516

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI+GY       +A++  + M     +PD+VT + +L AC  +G +  G+  F SM 
Sbjct: 517 WNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMV 576

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P    +  M+    +S +  +A KL  E+ F   +P       +LS+C     +
Sbjct: 577 EEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPF---EPSVMVWRALLSACVIHNDV 633

Query: 421 ESGK 424
           E G+
Sbjct: 634 ELGR 637



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 173/397 (43%), Gaps = 47/397 (11%)

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------------------------- 358
           L QR      E +     ++L +C+R+GD  TG+                          
Sbjct: 31  LAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYV 90

Query: 359 ---------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
                    ++FD MP  +  S+  ++  YSQ     EAI LF  +Q  G + +    + 
Sbjct: 91  KYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFST 150

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L    +    + G  VHA   K     D +V + LI  YS C   E A +VF  I   D
Sbjct: 151 VLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKD 210

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W  M+A    N    E+   F +MR     P  F+FA+VL +C  L     G+ VH 
Sbjct: 211 MVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHG 270

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
              K  Y+ ++FVG  LI++Y K GD+  A Q F+ M   + + W+ MI  YAQ+   +E
Sbjct: 271 CAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEE 330

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH----Y 645
           A+ ++  M    V P+  T  ++L AC  + LVD  +++ N +   H V+  LD      
Sbjct: 331 AIEMFCRMRRGLVLPNQFTLASLLQAC--ASLVD--LQLGNQIHC-HVVKVGLDMNVFVS 385

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMP-CKDDPVIWEVLL 681
             ++D   + G    +  L  E P C D  V W  ++
Sbjct: 386 NALMDMYAKCGRMENSLQLFSESPNCTD--VSWNTVI 420



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 148/301 (49%), Gaps = 19/301 (6%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L SC   G   +GK +H   +K  + +D +  + L+  Y K      A ++F  +P+ +
Sbjct: 50  LLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRN 109

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
            V + ++I G S      EA   F +++        F F+TVL        +  G  VHA
Sbjct: 110 TVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHA 169

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            + K G+ +D FVG+ALI+ Y  CG    ARQ FD +  K+ V+W  M+  Y +N   +E
Sbjct: 170 CVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEE 229

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG-------VEPIL 642
           +++L+  M   G KP++ TF ++L AC       VG+E+FN  +  HG       +E + 
Sbjct: 230 SLKLFSRMRIVGFKPNNFTFASVLKAC-------VGLEVFNVGKAVHGCAFKTSYLEELF 282

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
                +ID   ++G   +A  + +EMP KDD + W  +++    +A    ++ A E   R
Sbjct: 283 VGVE-LIDLYIKSGDVDDALQVFEEMP-KDDVIPWSFMIAR---YAQSEQSEEAIEMFCR 337

Query: 703 L 703
           +
Sbjct: 338 M 338


>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
 gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
          Length = 732

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 223/751 (29%), Positives = 368/751 (49%), Gaps = 94/751 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA+I  +GL  D +  N LI +Y K                             C+
Sbjct: 37  GRKVHAYIRESGLETDIYAANALINMYGK-----------------------------CR 67

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNG-LEEKALSVYNKMSNEGFVPTHITLAS 125
           S   E A++LF  M   NVVSW ++I    + G L  +++ ++ KM  EG  P  IT+ +
Sbjct: 68  SP--EDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVA 125

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V +A     ++  GR+ HG V++ G+  +  + NAL+ +Y K G    A  V  EM + +
Sbjct: 126 VLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREMPKRD 181

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-EGCGVESDVFA 244
            +++  M+SG A++    E L     M +  +S   V+ +++L  C+  E  G       
Sbjct: 182 VISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLG------- 234

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+ +H   + +G + D  + + LL MY K G ++  +     + ER+ +
Sbjct: 235 ----------EGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTI 284

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           +WN +I  Y +     +A+   Q+M+  G + D VT + ML  C                
Sbjct: 285 AWNTIIGAYARYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWI 344

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G +   R+MF+ MPS +  SWN+++S+  Q   + +A K
Sbjct: 345 SQLGFESIIVHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHK 404

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            F+ M+  G +PD  T   +L +C      + G  +H   +++       VA+ LI +Y+
Sbjct: 405 FFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYA 464

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           K   +E A  VF  + E + V WN+++A      L+ +A   F +M   ++   + ++  
Sbjct: 465 KLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM---DVARDKVTYVA 521

Query: 511 VLSSCAKLSSSF-QGRQVHAQIEKDGYVN--DIFVGSALIEMYCKCGDIYGARQFFDMMH 567
            L +C+ L+     G+ +H  +   G+ N  D    +AL+ MY KCG +  AR+ FD M 
Sbjct: 522 ALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEML 581

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ VTW  +I  YAQ+   ++A++L K M   GVK DD+ F++IL+ C HSGL++ G +
Sbjct: 582 HRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQDGVKVDDVVFLSILSGCDHSGLLEEGCK 641

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F SM  D+G+ P L+HY C+ID LGRAGH   AE L+D +P + D  +W  LL++CR+H
Sbjct: 642 YFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLAACRMH 701

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
            N    KRAA  +  LDP   A Y +L+NIY
Sbjct: 702 GNPERGKRAARRITLLDPSIPAAYVVLSNIY 732



 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 180/632 (28%), Positives = 313/632 (49%), Gaps = 69/632 (10%)

Query: 103 KALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALL 162
           +AL +Y +M  EG  P  +T  +  +A T    ++ GR+ H  + + GL+ +IY ANAL+
Sbjct: 1   QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV-VEALEMFRLMIRKAVSIDS 221
           ++Y KC   + A  +F  M  PN V++T+++   A+   +  E++ +FR M  + +  + 
Sbjct: 61  NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNL 120

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDM 281
           +++ +VL  C                        G+QVH   ++ G   D  L N+L+DM
Sbjct: 121 ITMVAVLRAC--------------------NLTDGRQVHGYVLEAGMSLDTSLGNALVDM 160

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           Y K GD+D A+++   +P+R V+SWN+MI+GY Q     + +  L RM+  G  P +VT 
Sbjct: 161 YCKTGDVDEADLVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTY 220

Query: 342 INMLVACVRSGDIKTGREMFDSMPSPSVS------------------------------- 370
             +L AC    D+  G+ +  S+    +                                
Sbjct: 221 ATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHE 280

Query: 371 ----SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
               +WN ++ +Y++  +H +A++ F++MQ +GVK D  T  ++L +C++   L  G  +
Sbjct: 281 RNTIAWNTIIGAYARYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILL 340

Query: 427 H--AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           H   + L   S I   V + L  +Y+KC   + A ++F  +P  + V WNS+I+    + 
Sbjct: 341 HDWISQLGFESII---VHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHG 397

Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
              +A  FF++M+     P + +  ++L +C K +++ +G  +H  + + G+     V +
Sbjct: 398 CYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVAN 457

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
           ALI MY K GD   AR  FD M  +NTV+WN ++  Y + G   +AV ++  M    V  
Sbjct: 458 ALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM---DVAR 514

Query: 605 DDITFVAILTACSH-SGLVDVGVEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEA 661
           D +T+VA L ACS  +G +  G ++ +   LDHG    LD    T +++  G+ G   EA
Sbjct: 515 DKVTYVAALDACSGLAGGLAHG-KLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEA 573

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
             + DEM  + D V W  L+ +   H+ +  A
Sbjct: 574 RKIFDEMLHR-DVVTWTSLIVAYAQHSEIEQA 604


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 204/612 (33%), Positives = 326/612 (53%), Gaps = 60/612 (9%)

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
           Y+ N LL+ Y K G    A  VF+ M  PN  T+ A++S LA    + +   +F  M ++
Sbjct: 42  YLLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQR 101

Query: 216 AVSIDSVSLSSVLGVCAREGCGVES-DVF-----AQSDNKFSR---------------NV 254
               D VS ++V+   +  G   ++  V+     A S  + SR                 
Sbjct: 102 ----DIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRA 157

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+Q HC  ++LGF A+  + + L+DMYAK   +  A+  F  +  ++VV +N MI G  
Sbjct: 158 LGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGL- 216

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNA 374
                                             +R   ++  R +F+ M      +W  
Sbjct: 217 ----------------------------------LRCKMVEEARRLFEVMTDRDSITWTT 242

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M++ ++Q+    EA+++FR M+F+G+  D+ T   IL++C A+  LE GKQ+HA  ++T 
Sbjct: 243 MVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTR 302

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              + +V S L+ +YSKC+  +LAE VF R+   +I+ W ++I G   N    EA   F 
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFS 362

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           +M+++ + P  ++  +V+SSCA L+S  +G Q H      G ++ I V +AL+ +Y KCG
Sbjct: 363 EMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
            I  A + FD M   + V+W  ++ GYAQ G   E + L++ M+A GVKPD +TF+ +L+
Sbjct: 423 SIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLS 482

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           ACS +G V+ G   F+SMQ DHG+ PI DHYTCMID   R+G   EAE  I +MP   D 
Sbjct: 483 ACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDA 542

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           + W  LLS+CRL  ++ + K AAE L  +DP+N A Y LL +++++ G+W+++  +R  M
Sbjct: 543 IGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGM 602

Query: 735 SENCIVKDPAYS 746
            +  + K+P  S
Sbjct: 603 RDRQVKKEPGCS 614



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 219/423 (51%), Gaps = 24/423 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  H  ILR G   + F+ + L+++Y+K +    A+  FD++  K++  +N +++   +
Sbjct: 159 GKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLR 218

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A +LF+ M +R+ ++W  +++   +NGLE +AL ++ +M  +G      T  S+
Sbjct: 219 CKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSI 278

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  AL  +E G++ H  +I+   D N++V +AL+ +Y+KC   K A  VF  M+  N 
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNI 338

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TA++ G  +     EA+ +F  M R  +  D  +L SV+  CA      E       
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEE------- 391

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q HCL +  G    + +SN+L+ +Y K G ++ A  +F  +     VSW
Sbjct: 392 ---------GAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 442

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             +++GY Q  ++ + I+L ++M + G +PD VT I +L AC R+G ++ GR  F SM  
Sbjct: 443 TALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQK 502

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  M+  YS+S   KEA +  ++M    + PD      +LS+C   G +E
Sbjct: 503 DHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMP---MHPDAIGWGTLLSACRLRGDME 559

Query: 422 SGK 424
            GK
Sbjct: 560 IGK 562



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/560 (26%), Positives = 261/560 (46%), Gaps = 93/560 (16%)

Query: 2   KAHVAGKLLHAHILRNGLFDD-TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           + HVAG L H  ILR       T+L N L+  Y K      A+ +FD MPH +++++NA+
Sbjct: 20  EPHVAGAL-HCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNAL 78

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVP 118
           LS    +  L     LF  M +R++VS+N +I+     G   +A+ VY  +  ++    P
Sbjct: 79  LSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRP 138

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK----------- 167
           + IT++++  A++AL D   G++ H  ++++G   N +V + L+ +YAK           
Sbjct: 139 SRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAF 198

Query: 168 --------------------CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
                               C   + A  +FE M++ + +T+T M++G  +     EALE
Sbjct: 199 DEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALE 258

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +FR M  + ++ID  +  S+L  C                   S    G+Q+H   I+  
Sbjct: 259 IFRRMRFQGIAIDQYTFGSILTACG----------------ALSALEQGKQIHAYIIRTR 302

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           ++ ++ + ++L+DMY+K   +  AE +F  +  ++++SW  +I GYGQ   S +A+ +  
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFS 362

Query: 328 RMKSCGFEPDEVTSINMLVACV-----------------------------------RSG 352
            M+  G +PD+ T  +++ +C                                    + G
Sbjct: 363 EMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            I+    +FD M      SW A++S Y+Q    KE I LF +M  +GVKPD  T   +LS
Sbjct: 423 SIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLS 482

Query: 413 SCAAMGILESGKQVHAASLKTASHI---DNYVASGLIGIYSKCQRNELAERVFHRIP-EL 468
           +C+  G +E G+    +  K    +   D+Y    +I +YS+  + + AE    ++P   
Sbjct: 483 ACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTC--MIDLYSRSGKLKEAEEFIKQMPMHP 540

Query: 469 DIVCWNSMIAGLSLNSLDIE 488
           D + W ++++   L   D+E
Sbjct: 541 DAIGWGTLLSACRLRG-DME 559



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/388 (22%), Positives = 168/388 (43%), Gaps = 41/388 (10%)

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M  P  S + A+LS+ +++E H         ++     P    L  +L++    G     
Sbjct: 1   MSRPLSSQYAALLSAAARTEPHVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARA 60

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           ++V  A      H + +  + L+   +  +     E +F  + + DIV +N++IAG S  
Sbjct: 61  RRVFDA----MPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGG 116

Query: 484 SLDIEAFMFFKQMRQ--NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
               +A   +  + Q  + + P++ + +T++ + + L     G+Q H QI + G+  + F
Sbjct: 117 GSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAF 176

Query: 542 VGSALIEMYCK-------------------------------CGDIYGARQFFDMMHGKN 570
           VGS L++MY K                               C  +  AR+ F++M  ++
Sbjct: 177 VGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRD 236

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           ++TW  M+ G+ QNG   EA+ +++ M   G+  D  TF +ILTAC     ++ G +I  
Sbjct: 237 SITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHA 296

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
            +      + +    + ++D   +      AE +   M CK + + W  L+     +   
Sbjct: 297 YIIRTRYDDNVFVG-SALVDMYSKCRSIKLAETVFRRMTCK-NIISWTALIVGYGQNGCS 354

Query: 691 RLAKRAAEELFR--LDPKNSAPYSLLAN 716
             A R   E+ R  +DP +    S++++
Sbjct: 355 EEAVRVFSEMQRDGIDPDDYTLGSVISS 382


>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
          Length = 702

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 206/596 (34%), Positives = 319/596 (53%), Gaps = 52/596 (8%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           VE GRR H  V+KIGL  + +V  +L+ +YAKCG    AV V+++M+  +  T   ++S 
Sbjct: 129 VELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISA 188

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
            A+    V+A ++F  +       +  + S++L VC                   S    
Sbjct: 189 YARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCG----------------TISAIQE 232

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+Q+H   +K+ + ++  + N+LL +Y+K G M+ AE++F NL +R+++SW   I G+ Q
Sbjct: 233 GKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQ 292

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                KA++    M+  G EP+E T   +L +C        G+ M     S   + W   
Sbjct: 293 HGDFKKALKQFSMMRESGIEPNEFTFSIVLASC----GCDLGKWMKQRTSS---NRWGG- 344

Query: 376 LSSYSQSENHKEAIKLFREMQFRG-----VKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
                    H  +I L R+M   G     ++P++  L  IL +C  +    +G+ +H   
Sbjct: 345 --------QHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVI 396

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
           LK +   D Y+ S LI +YSKC   E A RVF  IP  ++V WN++IAG           
Sbjct: 397 LKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIP--NVVSWNTLIAG----------- 443

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             F QM      P+  + +++L +C  +++   G+++H      G   D++V SAL++MY
Sbjct: 444 --FSQMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMY 501

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            KCG I  A+  F MM  +NTVTWN +I GYA +GY +EA+ L+  M  S  K D +TF 
Sbjct: 502 AKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFT 561

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
           A+L ACSH+G+V++G  +F  MQ  + +EP L+HY CM+D LGRAG   EA  LI  MP 
Sbjct: 562 AVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPV 621

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDD 726
           + D  +W  LL +CR H N+ LA+ AAE LF L+P++     LL+N+Y+  GRW +
Sbjct: 622 EPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGN 677



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 205/444 (46%), Gaps = 63/444 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHAH+++     +T + N L+ LYSKC     A+ +F+ +  ++I SW A ++   +
Sbjct: 233 GKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQ 292

Query: 67  SDDLEFAYKLFDEMPERNVV------------------SWNNLISALVRNGLEE-KALSV 107
             D + A K F  M E  +                    W    ++  R G +   ++ +
Sbjct: 293 HGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFL 352

Query: 108 YNKMSNEGFVPT-----HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALL 162
             KM  EG  PT        L S+ KA   L D   G   H +++K   + + Y+ +AL+
Sbjct: 353 LRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALI 412

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
            +Y+KCG  + A  VF+ +  PN V++  +++G             F  M+ +     SV
Sbjct: 413 YMYSKCGHVEKACRVFDWI--PNVVSWNTLIAG-------------FSQMLDQGFCPSSV 457

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
           ++SS+L  C                   +   HG+++H   + +G E D+++ ++L+DMY
Sbjct: 458 TISSLLPAC----------------TNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMY 501

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           AK G +  A+++F  +PER+ V+WN +I GY       +AIEL  +M+    + D +T  
Sbjct: 502 AKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFT 561

Query: 343 NMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
            +L AC  +G ++ G  +F  M       P +  +  M+    ++    EA  L + M  
Sbjct: 562 AVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMP- 620

Query: 398 RGVKPDRTTLAIILSSCAAMGILE 421
             V+PD+     +L +C   G +E
Sbjct: 621 --VEPDKFVWGALLGACRNHGNIE 642



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 212/494 (42%), Gaps = 120/494 (24%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  H  +++ GL  D F+C  LI++Y+KC    SA  ++DKM   D        +A C 
Sbjct: 132 GRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLD--------AATC- 182

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                 N LISA  RNG   +A  V+ ++ N G  P H T +++
Sbjct: 183 ----------------------NCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTM 220

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 +  ++ G++ H  V+K+       V NALL+LY+KCG  + A  VFE + + N 
Sbjct: 221 LAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNI 280

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA-------------- 232
           +++TA ++G  +     +AL+ F +M    +  +  + S VL  C               
Sbjct: 281 ISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSN 340

Query: 233 REGCGVESDVF-------------AQSDNKF------------SRNVHGQQVHCLTIKLG 267
           R G      +F             +   N+F            S    G+ +H + +K  
Sbjct: 341 RWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNS 400

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           FE+D ++ ++L+ MY+K G ++ A  +F  +P  +VVSWN +IAG+ Q            
Sbjct: 401 FESDAYIISALIYMYSKCGHVEKACRVFDWIP--NVVSWNTLIAGFSQ------------ 446

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---------------------------- 359
            M   GF P  VT  ++L AC    +++ G+E                            
Sbjct: 447 -MLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCG 505

Query: 360 -------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                  +F  MP  +  +WN+++  Y+      EAI+LF +M+    K D  T   +L+
Sbjct: 506 YISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLN 565

Query: 413 SCAAMGILESGKQV 426
           +C+  G++E G+ +
Sbjct: 566 ACSHAGMVELGESL 579



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 125/222 (56%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           ++F G  P R  +   LS C   G +E G++ H   +K     D +V + LI +Y+KC  
Sbjct: 104 VEFGGGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGE 163

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A RV+ ++  LD    N +I+  + N   ++AF  F Q+      P  ++++T+L+ 
Sbjct: 164 VDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAV 223

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C  +S+  +G+Q+HA + K  Y+++  VG+AL+ +Y KCG +  A   F+ +  +N ++W
Sbjct: 224 CGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISW 283

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
              I+G+ Q+G   +A++ +  M  SG++P++ TF  +L +C
Sbjct: 284 TASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASC 325



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 145/312 (46%), Gaps = 63/312 (20%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ +H  IL+N    D ++ + LI +YSKC +                           
Sbjct: 388 TGENMHTVILKNSFESDAYIISALIYMYSKCGH--------------------------- 420

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               +E A ++FD +P  NVVSWN LI+              +++M ++GF P+ +T++S
Sbjct: 421 ----VEKACRVFDWIP--NVVSWNTLIAG-------------FSQMLDQGFCPSSVTISS 461

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A T + ++ HG+  HG  + IG++K++YV +AL+ +YAKCG+   A  +F  M E N
Sbjct: 462 LLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERN 521

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFA 244
            VT+ +++ G A      EA+E+F  M      +D ++ ++VL  C+  G   +   +F 
Sbjct: 522 TVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFR 581

Query: 245 QSDNKFSRNVHGQQVHCLTIKLG----------------FEADLHLSNSLLDMYAKNGDM 288
           +   K+      +   C+   LG                 E D  +  +LL     +G++
Sbjct: 582 KMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNI 641

Query: 289 DSAEVIFSNLPE 300
           + AEV   +L E
Sbjct: 642 ELAEVAAEHLFE 653



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 109/231 (47%), Gaps = 6/231 (2%)

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
           +P +    + LS C +      GR+ H  + K G  +D FV ++LI+MY KCG++  A +
Sbjct: 110 FPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVR 169

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            +D M   +  T N +I  YA+NG+  +A +++  +   G +P+  T+  +L  C     
Sbjct: 170 VYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISA 229

Query: 622 VDVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           +  G ++  + +++ +  E  + +   ++    + G   EAE++ + +  + + + W   
Sbjct: 230 IQEGKQLHAHVVKMQYLSETAVGN--ALLTLYSKCGMMEEAEIVFENLG-QRNIISWTAS 286

Query: 681 LSSCRLHANVRLAKRAAEELFR--LDPKNSAPYSLLANIYSSLGRWDDLRA 729
           ++    H + + A +    +    ++P       +LA+    LG+W   R 
Sbjct: 287 INGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRT 337


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 209/600 (34%), Positives = 311/600 (51%), Gaps = 109/600 (18%)

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS----- 305
           +R+VHG+      I+  F  ++ + N L+D+Y K G +D A  +F  + ER+V S     
Sbjct: 43  ARSVHGR-----LIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSII 97

Query: 306 --------------------------WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
                                     WN MIAG+ Q  +  +A++   RM    F  ++ 
Sbjct: 98  STLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDY 157

Query: 340 TSINMLVACVRSGDIKTG-----------------------------------REMFDSM 364
           +  + L AC R  D+K G                                   R +FD M
Sbjct: 158 SFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGM 217

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
              +V SWN +++ Y Q+    EA++ F  M   G KPD  TLA ++S+CA +   + G 
Sbjct: 218 EEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGV 277

Query: 425 QVHAASLKTASHIDNYV-ASGLIGIYSKCQRNELAERVFHRIP----------------- 466
           Q+HA  +K+    ++ +  + L+ +Y+KC R   A  VF R+P                 
Sbjct: 278 QIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKS 337

Query: 467 --------------ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
                         + DIV WN++IAG + N  + EA   F+ +++  + PT ++F  +L
Sbjct: 338 ASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLL 397

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYV------NDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++ A L+    GRQ H+ + K G+        DIFVG++LI+MY KCG +    + F+ M
Sbjct: 398 NASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENM 457

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             K+ V+WN MI GYAQNGYG EA+ L++ M+ SG KPD +T +  L ACSH+GLV+ G 
Sbjct: 458 VEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGR 517

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
             F SM  +HG+ P+ DHYTCM+D LGRAG   EA+ LI+ MP + D V+W  LLS+C++
Sbjct: 518 RYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKV 577

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           H N+ L K  AE++F +DP +S PY LLAN+YS LGRW D  +VR+LM    +VK P  S
Sbjct: 578 HRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCS 637



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/580 (26%), Positives = 281/580 (48%), Gaps = 64/580 (11%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H  +++    ++ F+ NRLI++Y KC     A+ +FD+M  ++++S+N+I+S   +   
Sbjct: 46  VHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGF 105

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           ++ +  LF  MPE++  SWN++I+   ++   E+AL  + +M  + FV    +  S   A
Sbjct: 106 VDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSA 165

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            + L D++ G + HGL+ K     ++++ + L+  Y+KCG    A  VF+ M E N V++
Sbjct: 166 CSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSW 225

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             +++   +    +EALE F  M       D V+L+SV+  CA      E          
Sbjct: 226 NCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKE---------- 275

Query: 250 FSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                 G Q+H   +K   F  DL L N+L+DMYAK G ++ A  +F  +P R+ VS   
Sbjct: 276 ------GVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETT 329

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPS 368
           M++GY                                    +S  +K  R MF ++    
Sbjct: 330 MVSGYA-----------------------------------KSASVKAARSMFATIKQKD 354

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
           + SWNA+++ Y+Q+  ++EA+ LFR ++   V P   T   +L++ A +  LE G+Q H+
Sbjct: 355 IVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHS 414

Query: 429 ASLK------TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
             +K      +    D +V + LI +Y KC   E   RVF  + E D V WN+MI G + 
Sbjct: 415 HVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQ 474

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG---YVND 539
           N   +EA   F++M ++   P   +    L +C+      +GR+    + K+     V D
Sbjct: 475 NGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKD 534

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMI 578
            +  + ++++  + G +  A+   + M  + + V W+ ++
Sbjct: 535 HY--TCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLL 572



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 198/458 (43%), Gaps = 83/458 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  I ++    D F+ + LI+ YSKC     A+ +FD M  K++ SWN        
Sbjct: 175 GAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNC------- 227

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LI+   +NG   +AL  + +M+  GF P  +TLASV
Sbjct: 228 ------------------------LITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASV 263

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A   L   + G + H  V+K    +N + + NAL+ +YAKCG    A  VF+ M   N
Sbjct: 264 VSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRN 323

Query: 186 EVTFTAMMSGLAKTDRVV-------------------------------EALEMFRLMIR 214
            V+ T M+SG AK+  V                                EAL +FR++ R
Sbjct: 324 AVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKR 383

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV-HCLTIKLGFEADLH 273
           ++V     +  ++L   A             +D +  R  H   V H    + G E D+ 
Sbjct: 384 ESVCPTHYTFGNLLNASAN-----------LADLELGRQAHSHVVKHGFRFQSGEEPDIF 432

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           + NSL+DMY K G ++    +F N+ E+  VSWN MI GY Q     +A+EL Q+M   G
Sbjct: 433 VGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESG 492

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEA 388
            +PD VT I  L AC  +G ++ GR  F SM       P    +  M+    ++   +EA
Sbjct: 493 EKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEA 552

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
             L   M     +PD    + +LS+C     +  GK V
Sbjct: 553 KDLIESMP---KQPDAVVWSSLLSACKVHRNITLGKYV 587



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 140/301 (46%), Gaps = 31/301 (10%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D +  A +L  C  +      + VH   ++T    + ++ + LI +Y KC   + A +VF
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 463 HR-------------------------------IPELDIVCWNSMIAGLSLNSLDIEAFM 491
            R                               +PE D   WNSMIAG + +    EA  
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
           +F +M +++     +SF + LS+C++L     G Q+H  I K  Y  D+F+GS LI+ Y 
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCG +  AR+ FD M  KN V+WN +I  Y QNG   EA+  +  M   G KPD++T  +
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +++AC+       GV+I   +         L     ++D   + G  +EA  + D MP +
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322

Query: 672 D 672
           +
Sbjct: 323 N 323



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 126/316 (39%), Gaps = 82/316 (25%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           FA +L  C KL SS   R VH ++ +  +  ++F+ + LI++Y KCG +  AR+ FD M 
Sbjct: 27  FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86

Query: 568 GKNTV-------------------------------TWNEMIHGYAQNGYGDEAVRLYKD 596
            +N                                 +WN MI G+AQ+   +EA+  +  
Sbjct: 87  ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146

Query: 597 MIASGVKPDDITFVAILTACSH--------------------------SGLVD------- 623
           M       +D +F + L+ACS                           SGL+D       
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206

Query: 624 VGV--EIFNSMQLDHGVEPILDHYTCMIDCL---GRAGHFHEAEMLIDEMPCKDDPVIWE 678
           VG    +F+ M+     E  +  + C+I C    G A    EA   + E+  K D V   
Sbjct: 207 VGCARRVFDGME-----EKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLA 261

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPY-SLLANIYSSLGRWDDLR------AV 730
            ++S+C   A  +   +    + + D  +N     + L ++Y+  GR ++ R       V
Sbjct: 262 SVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPV 321

Query: 731 RELMSENCIVKDPAYS 746
           R  +SE  +V   A S
Sbjct: 322 RNAVSETTMVSGYAKS 337


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 220/714 (30%), Positives = 373/714 (52%), Gaps = 61/714 (8%)

Query: 73  AYKLFDEMPER--NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
           A+ LFD++P R   +   N L+ +  R+   ++AL+++  + +    P   TL+ VF   
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
              LD + GR+ H   +K GL  ++ V  +L+ +Y K         VF+EM E N V++T
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC-GVESDVFAQSDNK 249
           ++++G +         E+F  M  + V  +  ++S+V+     EG  G+           
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGI----------- 212

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G QVH + +K GFE  + + NSL+ +Y++ G +  A  +F  +  R  V+WN M
Sbjct: 213 ------GLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSM 266

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGDIKTG- 357
           IAGY +  Q  +  E+  +M+  G +P  +T  +++ +C           ++   +K+G 
Sbjct: 267 IAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGF 326

Query: 358 -----------------REMFDSMP-------SPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                            +EM D++          +V SW AM+S   Q+  + +A+ LF 
Sbjct: 327 TTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFS 386

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           +M+  GVKP+  T + IL+    + + E    +HA  +KT     + V + L+  Y K  
Sbjct: 387 QMRREGVKPNHFTYSAILTVHYPVFVSE----MHAEVIKTNYERSSSVGTALLDAYVKLG 442

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
               A +VF  I   D++ W++M+AG +      EA   F Q+ +  + P +F+F++V++
Sbjct: 443 NTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVIN 502

Query: 514 SCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           +CA  +++  QG+Q HA   K    N + V SAL+ MY K G+I  A + F     ++ V
Sbjct: 503 ACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLV 562

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +WN MI GY+Q+G   +A+ ++ +M    +  D +TF+ ++TAC+H+GLV+ G + FNSM
Sbjct: 563 SWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSM 622

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
             DH + P + HY+CMID   RAG   +A  +I+EMP      +W  LL + R+H NV L
Sbjct: 623 INDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVEL 682

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + AAE+L  L P++SA Y LL+N+Y++ G W +   VR+LM +  + K+P YS
Sbjct: 683 GELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYS 736



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 156/584 (26%), Positives = 277/584 (47%), Gaps = 85/584 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   ++ GL D   +   L+++Y K  N +  +                       
Sbjct: 112 GRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGR----------------------- 148

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++FDEM ERNVVSW +L++    NGL      ++ +M  EG +P   T+++V
Sbjct: 149 --------RVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTV 200

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      V  G + H +V+K G ++ I V N+L+SLY++ G  + A  VF++M   + 
Sbjct: 201 IAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDW 260

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA--REGCGVESDVFA 244
           VT+ +M++G  +  + +E  E+F  M    V    ++ +SV+  CA  RE   V      
Sbjct: 261 VTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALV------ 314

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE-RSV 303
                       + + C  +K GF  D  +  +L+   +K  +MD A  +FS + E ++V
Sbjct: 315 ------------KLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNV 362

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD---------------------EVTSI 342
           VSW  MI+G  Q   + +A+ L  +M+  G +P+                     EV   
Sbjct: 363 VSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKT 422

Query: 343 N----------MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
           N          +L A V+ G+     ++F+ + +  + +W+AML+ Y+Q+   +EA KLF
Sbjct: 423 NYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLF 482

Query: 393 REMQFRGVKPDRTTLAIILSSCAA-MGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
            ++   G+KP+  T + ++++CA+     E GKQ HA ++K   +    V+S L+ +Y+K
Sbjct: 483 HQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAK 542

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
               + A  VF R  E D+V WNSMI+G S +    +A   F +M++  M     +F  V
Sbjct: 543 RGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGV 602

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCG 554
           +++C       +G++    +  D ++N      S +I++Y + G
Sbjct: 603 ITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAG 646



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 79/152 (51%), Gaps = 1/152 (0%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +A+++   K  +++ A+++F    ER++VSWN++IS   ++G  +KAL V+++M      
Sbjct: 534 SALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMD 593

Query: 118 PTHITLASVFKASTALLDVEHGRR-CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
              +T   V  A T    VE G++  + ++    ++  +   + ++ LY++ G  + A+ 
Sbjct: 594 VDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMG 653

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
           +  EM  P   T    + G A+  R VE  E+
Sbjct: 654 IINEMPFPPGATVWRTLLGAARVHRNVELGEL 685


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 223/701 (31%), Positives = 359/701 (51%), Gaps = 74/701 (10%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A  + + +     V WN L+ A +  G  ++A+ V  +M   G  P H TL    KA   
Sbjct: 102 ALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGE 161

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP---NEVTF 189
           L     G   HGL+   G + N++V NAL+++Y++ G  + A  VF+E++     + +++
Sbjct: 162 LPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISW 221

Query: 190 TAMMSGLAKTDRVVEALEMFRLMI----RKAVS--IDSVSLSSVLGVCAREGCGVESDVF 243
            ++++   K      AL++F  M      KA +   D +S+ ++L  CA           
Sbjct: 222 NSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACA------SLKAL 275

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
            Q+          +++H   I+ G  AD  + N+L+D YAK G M  A  +F+ +  + V
Sbjct: 276 PQT----------KEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDV 325

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           VSWN M+ GY Q  +   A EL + M+      D +T                       
Sbjct: 326 VSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVIT----------------------- 362

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
                   W+A+++ Y+Q    +EA+  F++M   G +P+  T+  +LS+CA++G L  G
Sbjct: 363 --------WSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQG 414

Query: 424 KQVHAASLK------------TASHIDNYVASGLIGIYSKCQRNELAERVFHRIP--ELD 469
            + HA SLK                 D  V + LI +YSKC+  + A  +F+ IP  E +
Sbjct: 415 METHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERN 474

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQM--RQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
           +V W  MI G +      +A   F +M  +   + P  ++ + +L +CA LSS   G+Q+
Sbjct: 475 VVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQI 534

Query: 528 HAQIEKD-GYVNDI-FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           HA + +   Y + + FV + LI+MY KCGD+  AR  FD M  +N V+W  M+ GY  +G
Sbjct: 535 HAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHG 594

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
            G EA+ ++  M  +G  PDDI+F+ +L ACSHSG+VD G++ F+ M+ D+GV     HY
Sbjct: 595 RGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHY 654

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
            C+ID L R+G   +A   I EMP +    IW  LLS+CR+H+NV LA+ A  +L  +  
Sbjct: 655 ACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKA 714

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +N   Y+L++NIY++  RW D+  +R+LM ++ I K P  S
Sbjct: 715 ENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCS 755



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 231/440 (52%), Gaps = 46/440 (10%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA    K +H++ +RNG F D F+CN LI+ Y+KC +   A ++F+ M  KD+ SWNA++
Sbjct: 273 KALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMV 332

Query: 62  SAQCKSDDLEFAYKLFDEMPERN----VVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +   +S     A++LF  M + N    V++W+ +I+   + G  ++AL  + +M   G  
Sbjct: 333 TGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSE 392

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGL------------DKNIYVANALLSLY 165
           P  +T+ S+  A  +L  +  G   H   +K  L             +++ V NAL+ +Y
Sbjct: 393 PNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMY 452

Query: 166 AKCGWTKHAVPVFEEMS--EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK--AVSIDS 221
           +KC   K A  +F  +   E N VT+T M+ G A+     +AL++F  MI K  AV+ ++
Sbjct: 453 SKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNA 512

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC-LTIKLGFEADLH-LSNSLL 279
            ++S +L  CA                  S    G+Q+H  +T    +E+ ++ ++N L+
Sbjct: 513 YTISCILMACAH----------------LSSLRMGKQIHAYVTRHHEYESSVYFVANCLI 556

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
           DMY+K GD+D+A  +F ++P+R+ VSW  M++GYG   +  +A+++  +M+  GF PD++
Sbjct: 557 DMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDI 616

Query: 340 TSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           + + +L AC  SG +  G + FD M S      S   +  ++   ++S    +A K  +E
Sbjct: 617 SFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQE 676

Query: 395 MQFRGVKPDRTTLAIILSSC 414
           M    ++P       +LS+C
Sbjct: 677 MP---MEPSAAIWVALLSAC 693



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 220/496 (44%), Gaps = 100/496 (20%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK---DIYSWNA 59
           ++ +G   H  I  NG   + F+CN L+ +YS+  +   A  +FD++  K   D+ SWN+
Sbjct: 164 SYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNS 223

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           I++A  K  +   A  LF EM                          V+ K +NE     
Sbjct: 224 IVAAHVKGSNPRTALDLFSEM-----------------------TTIVHEKATNER--SD 258

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
            I++ ++  A  +L  +   +  H   I+ G   + +V NAL+  YAKCG  K AV VF 
Sbjct: 259 IISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFN 318

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            M   + V++ AM++G  ++ +   A E+F+ M ++ + +D ++ S+V+   A+ G G E
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQE 378

Query: 240 S-DVFAQ------------------SDNKFSRNVHGQQVHCLTIK------------LGF 268
           + D F Q                  +         G + H  ++K             G 
Sbjct: 379 ALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGD 438

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELL 326
             DL + N+L+DMY+K     +A  IF+++P  ER+VV+W VMI GY Q   S  A++L 
Sbjct: 439 GEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLF 498

Query: 327 QRM--KSCGFEPDEVTSINMLVACV----------------------------------- 349
             M  K     P+  T   +L+AC                                    
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDM 558

Query: 350 --RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
             + GD+ T R +FDSMP  +  SW +M+S Y      KEA+ +F +MQ  G  PD  + 
Sbjct: 559 YSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISF 618

Query: 408 AIILSSCAAMGILESG 423
            ++L +C+  G+++ G
Sbjct: 619 LVLLYACSHSGMVDQG 634



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/511 (24%), Positives = 215/511 (42%), Gaps = 97/511 (18%)

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           L   ++  Y   G    A  +   +     V WN+++  + ++ +  +AI +  RM   G
Sbjct: 85  LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144

Query: 334 FEPDEVTSINMLVAC-----------------------------------VRSGDIKTGR 358
            +PD  T    L AC                                    RSG ++   
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204

Query: 359 EMFDSMPSPSVS---SWNAMLSSYSQSENHKEAIKLFREM------QFRGVKPDRTTLAI 409
            +FD +    +    SWN++++++ +  N + A+ LF EM      +    + D  ++  
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           IL +CA++  L   K++H+ +++  +  D +V + LI  Y+KC   + A  VF+ +   D
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM---------------------------- 501
           +V WN+M+ G + +     AF  FK MR+  +                            
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384

Query: 502 -------YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN------------DIFV 542
                   P   +  ++LS+CA L +  QG + HA   K   ++            D+ V
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444

Query: 543 GSALIEMYCKCGDIYGARQFFDMM--HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            +ALI+MY KC     AR  F+ +    +N VTW  MI GYAQ G  ++A++L+ +MI+ 
Sbjct: 445 HNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISK 504

Query: 601 --GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE-PILDHYTCMIDCLGRAGH 657
              V P+  T   IL AC+H   + +G +I   +   H  E  +     C+ID   + G 
Sbjct: 505 PYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGD 564

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
              A  + D MP K + V W  ++S   +H 
Sbjct: 565 VDTARNVFDSMP-KRNEVSWTSMMSGYGMHG 594



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 28/216 (12%)

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG--------------------YVND 539
           ++ PT F  A++L  C  +++    RQ+H +I   G                    YV+ 
Sbjct: 28  DVSPTHF--ASLLKECRSVNTV---RQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSP 82

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
             +G+ ++  Y  CG    A    + +     V WN ++  + + G  D A+ +   M+ 
Sbjct: 83  KSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLR 142

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
           +G KPD  T    L AC        G   F+ +   +G E  +     ++    R+G   
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYRSG-SAFHGLICCNGFESNVFVCNALVAMYSRSGSLE 201

Query: 660 EAEMLIDEMPCK--DDPVIWEVLLSSCRLHANVRLA 693
           +A ++ DE+  K  DD + W  ++++    +N R A
Sbjct: 202 DASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTA 237


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 229/776 (29%), Positives = 374/776 (48%), Gaps = 78/776 (10%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            G+ +HA I+  GL  D ++   LI +Y KC    SA  +FDKM                 
Sbjct: 460  GRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR------------- 506

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                       D  P+  V  WN +I    + G  E+ L+ + +M   G  P   +L+ V
Sbjct: 507  -----------DSAPDITV--WNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIV 553

Query: 127  FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM-SEPN 185
                  L     GR+ HG +I+   + + Y+  AL+ +Y+ C     A  +F ++ +  N
Sbjct: 554  LGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSN 613

Query: 186  EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             V +  M+ G  +     ++LE++ L   +   + S S +     C+    G   D    
Sbjct: 614  IVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSH---GEVLD---- 666

Query: 246  SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                      G+QVHC  IK+ F+ D ++  SLL MYAK+G ++ A+ +F  + ++ V  
Sbjct: 667  ---------FGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVEL 717

Query: 306  WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------- 358
             N MI+ +    ++  A+ L  +MK+     D  T  ++L  C   G    GR       
Sbjct: 718  RNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVI 777

Query: 359  ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         +F +M    V +W +M++ + Q+   K+A+ 
Sbjct: 778  KRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALD 837

Query: 391  LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            LFR M+  GVK D   +  ++S+   +  +E G  +H  ++K     D +VA  L+ +YS
Sbjct: 838  LFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYS 897

Query: 451  KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
            K    E AE VF  +P  ++V WNSMI+  S N L   +     Q+ Q+  Y    S  T
Sbjct: 898  KFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITT 957

Query: 511  VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
            VL + + +++  +G+ +HA   +    +D+ V +ALI+MY KCG +  A+  F+ M  +N
Sbjct: 958  VLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRN 1017

Query: 571  TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
             VTWN MI GY  +G  +EAVRL+K+M  S   PD++TF+A++T+CSHSG+V+ G+ +F 
Sbjct: 1018 LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQ 1077

Query: 631  SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
             M++++GVEP ++HY  ++D LGRAG   +A   I  MP   D  +W  LL +CR H N+
Sbjct: 1078 LMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNM 1137

Query: 691  RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             L +  A+ L +++P   + Y  L N+Y  +  WD    +R  M    + K P  S
Sbjct: 1138 ELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCS 1193



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 179/668 (26%), Positives = 307/668 (45%), Gaps = 64/668 (9%)

Query: 81   PERNVVSWNNL-----ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD 135
            P++ V+   NL     I ALV+ G   +AL +++K  +        T  S+ K   +L +
Sbjct: 397  PKKAVLELMNLPQVEEIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSN 456

Query: 136  VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-----PNEVTFT 190
            + HGR  H  ++ +GL  + Y+A +L+++Y KCG    A+ VF++MSE     P+   + 
Sbjct: 457  LYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWN 516

Query: 191  AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
             ++ G  K     E L  F  M    +  D  SLS VLG+C                N+ 
Sbjct: 517  PVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGIC----------------NRL 560

Query: 251  SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVSWNVM 309
            S  + G+Q+H   I+  FE D +L  +L+ MY+       A  +F  L  RS +V+WNVM
Sbjct: 561  SWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVM 620

Query: 310  IAGYGQKYQSTKAIEL--LQRMKSC---------------------------------GF 334
            I G+ +     K++EL  L + ++C                                  F
Sbjct: 621  IGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNF 680

Query: 335  EPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
            + D     ++L    +SG ++  +++FD +    V   NAM+S++  +    +A+ L+ +
Sbjct: 681  QDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNK 740

Query: 395  MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
            M+      D  T++ +LS C+ +G  + G+ VHA  +K +   +  + S L+ +Y KC  
Sbjct: 741  MKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGS 800

Query: 455  NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
             E A+ VF+ + E D+V W SMIAG   N    +A   F+ M +  +        +V+S+
Sbjct: 801  TEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISA 860

Query: 515  CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
               L +   G  +H    K G  +D+FV  +L++MY K G    A   F  M  KN V W
Sbjct: 861  GLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAW 920

Query: 575  NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
            N MI  Y+ NG  + ++ L   ++  G   D ++   +L A S    +  G +  ++ Q+
Sbjct: 921  NSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKG-KTLHAYQI 979

Query: 635  DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
               +   L     +ID   + G    A+++ + MP + + V W  +++    H N   A 
Sbjct: 980  RLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMP-RRNLVTWNSMIAGYGSHGNCEEAV 1038

Query: 695  RAAEELFR 702
            R  +E+ R
Sbjct: 1039 RLFKEMKR 1046



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 258/548 (47%), Gaps = 81/548 (14%)

Query: 4    HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            ++AG+ +H +I+RN    D +L   LI +YS C+    A  LF K+ ++           
Sbjct: 563  YMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRS---------- 612

Query: 64   QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                                N+V+WN +I   V NG+ EK+L +Y+   NE       + 
Sbjct: 613  --------------------NIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASF 652

Query: 124  ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
               F A +    ++ GR+ H  VIK+    + YV  +LL++YAK G  + A  VF+++ +
Sbjct: 653  TGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD 712

Query: 184  PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
                   AM+S      R  +AL ++  M      +DS ++SS+L  C+  G        
Sbjct: 713  KEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVG-------- 764

Query: 244  AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                  F R VH +      IK   ++++ + ++LL MY K G  + A+ +F  + ER V
Sbjct: 765  ---SYDFGRTVHAE-----VIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDV 816

Query: 304  VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE--VTSI------------------- 342
            V+W  MIAG+ Q  +   A++L + M+  G + D   +TS+                   
Sbjct: 817  VAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGF 876

Query: 343  --------NMLVAC------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                    ++ VAC       + G  ++   +F SMP+ ++ +WN+M+S YS +   + +
Sbjct: 877  AIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMS 936

Query: 389  IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
            I L  ++   G   D  ++  +L + +++  L  GK +HA  ++     D  V + LI +
Sbjct: 937  INLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDM 996

Query: 449  YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
            Y KC   + A+ +F  +P  ++V WNSMIAG   +    EA   FK+M+++E  P + +F
Sbjct: 997  YVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTF 1056

Query: 509  ATVLSSCA 516
              +++SC+
Sbjct: 1057 LALITSCS 1064



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 5/129 (3%)

Query: 3    AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
            A + GK LHA+ +R  +  D  + N LI++Y KC     AQ +F+ MP +++ +WN++++
Sbjct: 967  ALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIA 1026

Query: 63   AQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE-GFV 117
                  + E A +LF EM         V++  LI++   +G+ E+ L+++  M  E G  
Sbjct: 1027 GYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVE 1086

Query: 118  PTHITLASV 126
            P     ASV
Sbjct: 1087 PRMEHYASV 1095


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 237/778 (30%), Positives = 396/778 (50%), Gaps = 83/778 (10%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G  +H  I++ GL  D F+   L+ LY                        N  L+A 
Sbjct: 47  IEGVQVHGFIVKVGLLSDVFVGTSLVHLYG-----------------------NYGLAAD 83

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                   A K+F EM  +NVVSW  L+ A V  G     +++Y +M +EG      T++
Sbjct: 84  --------AMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMS 135

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV     +L +   G +  G VIK GL+ N+ VAN+L+S++   G  + A  VF  M E 
Sbjct: 136 SVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEH 195

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + +++ +M++   +     E+L  F  M R    I+S +LS++L      GCG   ++  
Sbjct: 196 DTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA-----GCGSVDNL-- 248

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
               K+ R +H      L +K G+ +++  SN+L+ MY+  G  + AE++F  + E+ ++
Sbjct: 249 ----KWGRGIHS-----LVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMI 299

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           SWN M+A Y Q      A++LL  M       + VT  + L AC                
Sbjct: 300 SWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALV 359

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               +SG +   +++F +MP     +WNA++  ++ SE   EA+
Sbjct: 360 IHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEAL 419

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMG-ILESGKQVHAASLKTASHIDNYVASGLIGI 448
           K F+ M+  GV  +  T++ +L +C A   +LE G  +HA  + T    D YV + LI +
Sbjct: 420 KAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITM 479

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+KC     +  +F R+   +   WN+M+A  + +    EA  F  +MR+  +   +FSF
Sbjct: 480 YAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSF 539

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           +  L++ AKL+   +G+Q+H    K G  ++ FV SA ++MY KCG+I    +       
Sbjct: 540 SECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPIN 599

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           ++ ++WN +   ++++G+ ++A   + +MI  GVKPD +TFV++L+ACSH G+V+ G+  
Sbjct: 600 RSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAY 659

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           ++SM  + G+   + H  C+ID LGR+G F EAE  I EMP      +W  LL++C+ H 
Sbjct: 660 YDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHG 719

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           N+ L ++A E L +LDP + + Y L +NI ++ G+W+D+  +R  M  N I K PA S
Sbjct: 720 NLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACS 777



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 170/654 (25%), Positives = 299/654 (45%), Gaps = 59/654 (9%)

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA--STALLDVEHGRRCHGLVIKI 149
           +S  VR G   +++  +N+M + G  P+ I +AS+  A   +  + +E G + HG ++K+
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIE-GVQVHGFIVKV 59

Query: 150 GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
           GL  +++V  +L+ LY   G    A+ VF+EM   N V++TA+M            + ++
Sbjct: 60  GLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIY 119

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
           R M  + +S +  ++SSV+  C      +E+++             G QV    IK G E
Sbjct: 120 RRMRSEGMSCNDNTMSSVISTCV----SLENELL------------GYQVLGHVIKYGLE 163

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
            ++ ++NSL+ M+   G ++ A  +FS + E   +SWN MIA Y +     +++     M
Sbjct: 164 TNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWM 223

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREM----------------------------- 360
                E +  T   ML  C    ++K GR +                             
Sbjct: 224 FRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRC 283

Query: 361 ------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                 F  M    + SWN+M++ Y+Q  N  +A+KL   M +     +  T    L++C
Sbjct: 284 EDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAAC 343

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           +       GK +HA  +    H +  V + L+ +Y+K      A++VF  +P+ D V WN
Sbjct: 344 SDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWN 403

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ-GRQVHAQIEK 533
           ++I G + +    EA   FK MR+  +     + + VL +C   +   + G  +HA I  
Sbjct: 404 ALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIIL 463

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G+ +D +V ++LI MY KCGD+  +   FD +  KN   WN M+   A +G+ +EA++ 
Sbjct: 464 TGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKF 523

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN-SMQLDHGVEPILDHYTCMIDCL 652
             +M  +GV  D+ +F   L A +   +++ G ++   +++L     P +   T  +D  
Sbjct: 524 LLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASAT--MDMY 581

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK 706
           G+ G   +   +I   P     + W +L SS   H     AK    E+  L  K
Sbjct: 582 GKCGEIDDVLRIIPR-PINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVK 634



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 121/249 (48%), Gaps = 5/249 (2%)

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSAL 546
           E+  FF +MR   + P+  + A+++++C +      +G QVH  I K G ++D+FVG++L
Sbjct: 12  ESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFVGTSL 71

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           + +Y   G    A + F  M  KN V+W  ++  Y   G     + +Y+ M + G+  +D
Sbjct: 72  VHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCND 131

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
            T  ++++ C       +G ++   + + +G+E  +     +I   G  G   EA  +  
Sbjct: 132 NTMSSVISTCVSLENELLGYQVLGHV-IKYGLETNVSVANSLISMFGYFGSVEEACYVFS 190

Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDD 726
            M  + D + W  ++++   +   + + R    +FR+  + ++  + L+ + +  G  D+
Sbjct: 191 GMD-EHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINS--TTLSTMLAGCGSVDN 247

Query: 727 LRAVRELMS 735
           L+  R + S
Sbjct: 248 LKWGRGIHS 256


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 222/701 (31%), Positives = 357/701 (50%), Gaps = 74/701 (10%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A  + + +     V WN L+   ++ G  ++A+ V  +M   G  P H TL    KA   
Sbjct: 102 ALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGE 161

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP---NEVTF 189
           L     GR  HGL+   G + N++V NAL+++Y++CG  + A  VF+E++     + +++
Sbjct: 162 LPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISW 221

Query: 190 TAMMSGLAKTDRVVEALEMFRLMI----RKAVS--IDSVSLSSVLGVCAREGCGVESDVF 243
            ++++   K      ALE+F  M      KA +   D +S+ ++L  CA           
Sbjct: 222 NSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACA----------- 270

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                        +++H   I+ G  AD  + N+L+D YAK G M+ A  +F+ +  + V
Sbjct: 271 -----SLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDV 325

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           VSWN M+ GY Q      A EL + M+      D +T                       
Sbjct: 326 VSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVIT----------------------- 362

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
                   W+A+++ Y+Q    +EA+  F++M   G +P+  T+  +LS+CA++G L  G
Sbjct: 363 --------WSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQG 414

Query: 424 KQVHAASLK------------TASHIDNYVASGLIGIYSKCQRNELAERVFHRIP--ELD 469
            ++HA SLK                 D  V + LI +YSKC+  + A  +F  IP  E +
Sbjct: 415 MEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERN 474

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQM--RQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
           +V W  MI G +      +A   F +M  +   + P  ++ + +L +CA L++   G+Q+
Sbjct: 475 VVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQI 534

Query: 528 HAQIEKD-GYVNDI-FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           HA + +   Y   + FV + LI+MY KCGD+  AR  FD M  +N V+W  M+ GY  +G
Sbjct: 535 HAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHG 594

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
            G EA+ ++  M  +G  PDDI+F+ +L ACSHSG+VD G+  F+ M+ D+ V    +HY
Sbjct: 595 RGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHY 654

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
            C+ID L R G   +A   I EMP +   VIW  LLS+CR+H+NV LA+ A  +L  +  
Sbjct: 655 ACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKA 714

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +N   Y+L++NIY++  RW D+  +R+LM ++ I K P  S
Sbjct: 715 ENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCS 755



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 229/434 (52%), Gaps = 46/434 (10%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H++ +RNG F D F+CN LI+ Y+KC + + A  +F+ M  KD+ SWNA+++   +S
Sbjct: 279 KEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQS 338

Query: 68  DDLEFAYKLFDEMPERN----VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
            +   A++LF+ M + N    V++W+ +I+   + G  ++AL  + +M  +G  P  +T+
Sbjct: 339 GNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTI 398

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGL------------DKNIYVANALLSLYAKCGWT 171
            S+  A  +L  +  G   H   +K  L             +++ V NAL+ +Y+KC   
Sbjct: 399 ISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSF 458

Query: 172 KHAVPVFEEMS--EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK--AVSIDSVSLSSV 227
           K A  +F+ +   E N VT+T M+ G A+     +AL++F  MI K  AV+ ++ ++S +
Sbjct: 459 KAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCI 518

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC-LTIKLGFEADLH-LSNSLLDMYAKN 285
           L  CA                  +    G+Q+H  +T    +E  ++ ++N L+DMY+K 
Sbjct: 519 LMACAH----------------LAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKC 562

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
           GD+D+A  +F ++P+R+ VSW  M++GYG   +  +A+++  +M+  GF PD+++ + +L
Sbjct: 563 GDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622

Query: 346 VACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
            AC  SG +  G   FD M        S   +  ++   ++     +A K  +EM    +
Sbjct: 623 YACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMP---M 679

Query: 401 KPDRTTLAIILSSC 414
           +P       +LS+C
Sbjct: 680 EPSAVIWVALLSAC 693



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 251/561 (44%), Gaps = 106/561 (18%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK---DIYSWNA 59
           ++  G+ LH  I  NG   + F+CN L+ +YS+C +   A  +FD++  K   D+ SWN+
Sbjct: 164 SYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNS 223

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           I++A  K  +   A +LF EM                       ++ V+ K +NE     
Sbjct: 224 IVAAHVKGSNPRTALELFSEM-----------------------SMIVHEKATNER--SD 258

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
            I++ ++  A  +L  +   +  H   I+ G   + +V NAL+  YAKCG    AV VF 
Sbjct: 259 IISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFN 318

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            M   + V++ AM++G  ++     A E+F  M ++ + +D ++ S+V+   A+ GC  E
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQE 378

Query: 240 S-DVFAQS--DNKFSRNV----------------HGQQVHCLTIK------------LGF 268
           + D F Q   D     +V                 G ++H  ++K             G 
Sbjct: 379 ALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGD 438

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELL 326
             DL + N+L+DMY+K     +A  IF ++P  ER+VV+W VMI GY Q   S  A+++ 
Sbjct: 439 GEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIF 498

Query: 327 QRM--KSCGFEPDEVTSINMLVACV----------------------------------- 349
             M  K     P+  T   +L+AC                                    
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDM 558

Query: 350 --RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
             + GD+ T R +FDSMP  +  SW +M+S Y      KEA+ +F +MQ  G  PD  + 
Sbjct: 559 YSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISF 618

Query: 408 AIILSSCAAMGILESGKQ---VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
            ++L +C+  G+++ G     +        +  ++Y    +I + ++C R + A +    
Sbjct: 619 LVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYAC--VIDLLARCGRLDKAWKTIQE 676

Query: 465 IP-ELDIVCWNSMIAGLSLNS 484
           +P E   V W ++++   ++S
Sbjct: 677 MPMEPSAVIWVALLSACRVHS 697



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 32/224 (14%)

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG--------------------YVND 539
           ++ PT F  A++L  C  +++    RQ+H +I   G                    YV+ 
Sbjct: 28  DVSPTHF--ASLLKECRSVNTV---RQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSP 82

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
             +G+ ++  Y  CG    A    + +     V WN ++  + + G+ D A+ +   M+ 
Sbjct: 83  KSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLR 142

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
           +G KPD  T    L AC        G    + +   +G E  +     ++    R G   
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYCCG-RALHGLICCNGFESNVFVCNALVAMYSRCGSLE 201

Query: 660 EAEMLIDEMPCK--DDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           +A ++ DE+  K  DD + W  ++++    +N     R A ELF
Sbjct: 202 DASLVFDEITRKGIDDVISWNSIVAAHVKGSN----PRTALELF 241


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 228/780 (29%), Positives = 375/780 (48%), Gaps = 94/780 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA I+  GL ++  L N L+ LY KC +    + +F ++  +D             
Sbjct: 48  GRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRD------------- 92

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                               SW  +I+A   +G  ++A+ ++++M  EG     +T  +V
Sbjct: 93  ------------------EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAV 134

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L D+  GR  H  +++ GL     +AN LL +Y  CG    A+ +FE+M E + 
Sbjct: 135 LKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDL 193

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A ++  A++  +  ALE+F+ M  + V    ++L   L VCA            Q+
Sbjct: 194 VSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCA---------TIRQA 244

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                     Q +H +  + G E  L +S +L   YA+ G +  A+ +F    ER VVSW
Sbjct: 245 ----------QAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSW 294

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           N M+  Y Q    ++A  L  RM   G  P +VT +N    C                  
Sbjct: 295 NAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRFGRMIHGCALEKGL 354

Query: 349 --------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          R G  +  R +F  +P  +VS WN M++  SQ    K A++LF+ 
Sbjct: 355 DRDIVLGNALLDMYTRCGSPEEARHLFKRIPCNAVS-WNTMIAGSSQKGQMKRAVELFQR 413

Query: 395 MQFRGVKPDRTTLAIILSSCAA----MGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           MQ  G+ P R T   +L + A+       +  G+++H+  +      +  + + ++ +Y+
Sbjct: 414 MQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYA 473

Query: 451 KCQRNELAERVFHRIP---ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
            C   + A   F R       D+V WN++I+ LS +     A  FF++M  + + P Q +
Sbjct: 474 SCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQIT 533

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              VL +CA  ++  +G  VH  +   G  +++FV +AL  MY +CG +  AR+ F+ + 
Sbjct: 534 CVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVA 593

Query: 568 -GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++ V +N MI  Y+QNG   EA++L+  M   G +PD+ +FV++L+ACSH GL D G 
Sbjct: 594 VERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGW 653

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           EIF SM+  +G+ P  DHY C +D LGRAG   +AE LI  M  K   ++W+ LL +CR 
Sbjct: 654 EIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRK 713

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + +V   + A   +  LDP + + Y +L+NI +  G+WD+   VR  M    + K+   S
Sbjct: 714 YRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKS 773



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 175/632 (27%), Positives = 296/632 (46%), Gaps = 68/632 (10%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P H  L  + +A+     +  GRR H  ++ +GL++ +   N LL LY KC        V
Sbjct: 29  PAH--LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEV 84

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  +   +E ++T +++   +  +   A+ MF  M ++ V  D+V+  +VL  CAR G  
Sbjct: 85  FSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLG-- 142

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
              D+             G+ +H   ++ G +    L+N LL +Y   G + SA ++F  
Sbjct: 143 ---DL-----------SQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEK 188

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
           + ER +VSWN  IA   Q      A+EL QRM+  G  P  +T +  L  C         
Sbjct: 189 M-ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQAI 247

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   R G +   +E+FD      V SWNAML +Y+Q  + 
Sbjct: 248 HFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHM 307

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            EA  LF  M   G+ P + TL    + C++   L  G+ +H  +L+     D  + + L
Sbjct: 308 SEAALLFARMLHEGISPSKVTLVNASTGCSS---LRFGRMIHGCALEKGLDRDIVLGNAL 364

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y++C   E A  +F RIP  + V WN+MIAG S       A   F++M+   M P +
Sbjct: 365 LDMYTRCGSPEEARHLFKRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVR 423

Query: 506 FSFATVLSSCA----KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            ++  +L + A    +  +  +GR++H++I   GY ++  +G+A+++MY  CG I  A  
Sbjct: 424 ATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAA 483

Query: 562 FFD---MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
            F    M    + V+WN +I   +Q+G+G  A+  ++ M   GV P+ IT VA+L AC+ 
Sbjct: 484 SFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAG 543

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
           +  +  G EI +      G+E  L   T +    GR G    A  + +++  + D VI+ 
Sbjct: 544 AAALTEG-EIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFN 602

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            ++++   ++   LA  A +  +R+  + S P
Sbjct: 603 AMIAA---YSQNGLAGEALKLFWRMQQEGSRP 631


>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
          Length = 608

 Score =  365 bits (938), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 203/587 (34%), Positives = 310/587 (52%), Gaps = 54/587 (9%)

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           L  L +    ++ A  +F+ +  P       ++S L++     E L+ F  + R+   + 
Sbjct: 25  LHDLLSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVP 84

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
              +  V+  CA         + A S         G+QVHC  I  G   D+ +  +L+D
Sbjct: 85  PGCVPLVVKSCA---------ILAASRQ-------GKQVHCHAIVRGLLGDIFVQTALVD 128

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
            YAKNGDMD A  +F  +P +  +  N +I GY                           
Sbjct: 129 FYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYS-------------------------- 162

Query: 341 SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                    +SGD+   R +FD M   + +SWN+M++ Y+    ++EA++LFR M   G 
Sbjct: 163 ---------KSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGA 213

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAE 459
           +P+  T+A + S CA  G LE+GK   A SL     + N +  + L+ +Y KCQ  + A 
Sbjct: 214 RPNAITIATMFSICAKTGDLETGKW--ARSLIAEQDLQNMIVHTALMEMYVKCQAIDEAR 271

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           R F R+ + D+V W++MIAG + N    E+   F++M+     P + +   VLS+CA+L 
Sbjct: 272 REFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLG 331

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S   G Q+ + +E        ++GSALI+MY KCG +  AR  F+ M  K  +TWN M+ 
Sbjct: 332 SDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMR 391

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G A NG+  +A+ LYK+M    V+P++ITFVA+LTAC+H+GLVD G+  F  M+  H V 
Sbjct: 392 GLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVS 451

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P ++H  C++D L ++G   EA   I +M  + + VIW  LLS+CR HA+V LAK AA +
Sbjct: 452 PQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASK 511

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L  L+P NS+ Y LL+NIY+  G W D+R +R+LM    + K  AYS
Sbjct: 512 LLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYS 558



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 209/423 (49%), Gaps = 25/423 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H H +  GL  D F+   L++ Y+K  +   A  +FD+MP KD    N +++   K
Sbjct: 104 GKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSK 163

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S D+  A +LFD M  R   SWN++I+     G  ++AL ++ +M +EG  P  IT+A++
Sbjct: 164 SGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATM 223

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F       D+E G+    L+ +  L +N+ V  AL+ +Y KC     A   F+ M + + 
Sbjct: 224 FSICAKTGDLETGKWARSLIAEQDL-QNMIVHTALMEMYVKCQAIDEARREFDRMQQRDV 282

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V ++ M++G A+  R  E+LE+F  M   +   + V+L  VL  CA+ G    SD     
Sbjct: 283 VAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLG----SDELG-- 336

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             +   +V  Q +  LT  LG        ++L+DMY K G +  A  +F+ +  + V++W
Sbjct: 337 -GQIGSHVESQNLP-LTSYLG--------SALIDMYTKCGHVGRARSVFNRMEHKVVITW 386

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N M+ G      +  AI L + M     +P+E+T + +L AC  +G +  G   F  M  
Sbjct: 387 NSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKT 446

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               SP V     ++    +S   +EA K   +M+   V+P+    + +LS+C A   +E
Sbjct: 447 IHHVSPQVEHCACIVDLLCKSGRLREAYKFICDME---VEPNAVIWSTLLSACRAHADVE 503

Query: 422 SGK 424
             K
Sbjct: 504 LAK 506



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 145/621 (23%), Positives = 258/621 (41%), Gaps = 148/621 (23%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A  LFD +P         LISAL R    ++ L  ++ +   G       +  V K+   
Sbjct: 38  ARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCAI 97

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           L     G++ H   I  GL  +I+V  AL+  YAK G    AV VF+EM   + +    +
Sbjct: 98  LAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCL 157

Query: 193 MSGLAKTDRVV-------------------------------EALEMFRLMIRKAVSIDS 221
           ++G +K+  VV                               EAL +FR M+ +    ++
Sbjct: 158 ITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNA 217

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH---LSNSL 278
           ++++++  +CA+ G  +E+  +A+S                   L  E DL    +  +L
Sbjct: 218 ITIATMFSICAKTG-DLETGKWARS-------------------LIAEQDLQNMIVHTAL 257

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           ++MY K   +D A   F  + +R VV+W+ MIAGY Q  +  +++EL +RMK+   +P+E
Sbjct: 258 MEMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNE 317

Query: 339 VTSINMLVAC-----------------------------------VRSGDIKTGREMFDS 363
           VT + +L AC                                    + G +   R +F+ 
Sbjct: 318 VTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNR 377

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M    V +WN+M+   + +   ++AI L++EM    V+P+  T   +L++C   G+++ G
Sbjct: 378 MEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQG 437

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
                  +KT  H+                    + +V H    +D++C +  +      
Sbjct: 438 MSFF-KEMKTIHHV--------------------SPQVEHCACIVDLLCKSGRLR----- 471

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC--------AKLSSSFQGRQVHAQIEKDG 535
               EA+ F   M   E+ P    ++T+LS+C        AKL++S         +E D 
Sbjct: 472 ----EAYKFICDM---EVEPNAVIWSTLLSACRAHADVELAKLAASKL-----LVLEPDN 519

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT-----VTWNEM---IHGY-AQNGY 586
             + I+V   L  +Y   G     R+  D+M  KN       +W E+   +H +  Q+ Y
Sbjct: 520 --SSIYV--LLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTY 575

Query: 587 GDEAVRLYKDMIASGVKPDDI 607
             ++  ++  +   G+  DD+
Sbjct: 576 HPKSAEIFNVVDGMGLHLDDV 596


>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
 gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
          Length = 701

 Score =  365 bits (938), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 221/724 (30%), Positives = 380/724 (52%), Gaps = 43/724 (5%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
            F  N+ +   ++     +A+ LFD MP ++  ++N++LSA  +   ++ A  LFD MP 
Sbjct: 18  VFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPS 77

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
           RN VSWN +I+AL  +G    A  ++++M +       + ++   +A    L  +   R 
Sbjct: 78  RNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRM 137

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
            G       DK     NA++S YAK G    AV +  EM  P+  ++ + ++GL ++ ++
Sbjct: 138 PG-------DKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQM 190

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
           V A++ F  M+ K    D VS + +L    R G     D+ A + + F R      V  +
Sbjct: 191 VRAVQFFDEMVEK----DMVSWNLMLEGFVRAG-----DLDAAA-SFFGRIESPNVVSWV 240

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
           T              LL+ Y + G +  A  +F  +PER+VV+ NVM+ GY +  +  +A
Sbjct: 241 T--------------LLNGYCRAGRISDARDLFDRMPERNVVACNVMLDGYVRLSRLEEA 286

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
            +L   M       + ++   ++    R+G ++  +++ D M    V++  A++  Y Q 
Sbjct: 287 CKLFDEMPG----KNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQR 342

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               +A ++F  M+      D      ++S     G+LE    +     +   + D    
Sbjct: 343 NMVNDARQIFDGMEVH----DTVCWNTMISGYVQRGMLEEAMLL----FQRMPNKDTVSW 394

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + +I  Y++  +   A  +F R+   + V WNS+I+G   N L ++AF  F  MR+    
Sbjct: 395 NTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNR 454

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
               ++A+ L +CA L++   GRQ+H+ + + G++ND+F  +ALI  Y KCG +  A+Q 
Sbjct: 455 ADWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQI 514

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           FD M GK+ V+WN ++ GYA NG G EA+ ++++M A+GV+PD++TFV IL+ACS +GL+
Sbjct: 515 FDEMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLI 574

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D G+  FNSM  ++ ++P+ +HY CM D LGRAG  +EA  L+  M  + +  +W  LL 
Sbjct: 575 DEGLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGALLG 634

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           +C+++ N  LA+ AAE+L  L+P  ++ Y LL+NI +  G+WD+    R  + E    K 
Sbjct: 635 ACQMYKNHELARLAAEKLSELEPCRASNYVLLSNISAEAGKWDEAEKARASIKEKGANKP 694

Query: 743 PAYS 746
           P  +
Sbjct: 695 PGLA 698



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/536 (24%), Positives = 244/536 (45%), Gaps = 42/536 (7%)

Query: 19  LFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           LFD     +T   N ++   ++      A+ LFD MP ++  SWNA+++A      +  A
Sbjct: 40  LFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPSRNAVSWNAMIAALSDHGRVADA 99

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS-------- 125
             LFD MP R+  SW  ++S   R G  E A  V ++M  +     +  + S        
Sbjct: 100 RGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRMPGDKCTACYNAMISGYAKNGRF 159

Query: 126 --------------VFKASTALLDV-EHGRRCHGL-VIKIGLDKNIYVANALLSLYAKCG 169
                         +F  ++AL  + + G+    +      ++K++   N +L  + + G
Sbjct: 160 DDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAG 219

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
               A   F  +  PN V++  +++G  +  R+ +A ++F  M  + V   +V L   + 
Sbjct: 220 DLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLFDRMPERNVVACNVMLDGYVR 279

Query: 230 VCA-REGCGVESDVFAQSDNKFSRNVHG-------QQVHCLTIKLGFEADLHLSNSLLDM 281
           +    E C +  ++  ++   ++  + G       Q+   L  K+ F   +    +L+  
Sbjct: 280 LSRLEEACKLFDEMPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNC-VAAKTALMHG 338

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           Y +   ++ A  IF  +     V WN MI+GY Q+    +A+ L QRM +     D V+ 
Sbjct: 339 YLQRNMVNDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPN----KDTVSW 394

Query: 342 INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
             M+    + G ++    +F  M   +  SWN+++S + Q+    +A   F  M+    +
Sbjct: 395 NTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNR 454

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            D +T A  L +CA +  L  G+Q+H+  +++    D +  + LI  Y+KC R   A+++
Sbjct: 455 ADWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQI 514

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           F  +   DIV WN+++ G + N    EA   F++M  N + P + +F  +LS+C++
Sbjct: 515 FDEMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSR 570



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 215/489 (43%), Gaps = 97/489 (19%)

Query: 16  RNGLFDDT------------FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN----- 58
           +NG FDD             F  N  +   ++      A   FD+M  KD+ SWN     
Sbjct: 155 KNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEG 214

Query: 59  --------------------------AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLI 92
                                      +L+  C++  +  A  LFD MPERNVV+ N ++
Sbjct: 215 FVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLFDRMPERNVVACNVML 274

Query: 93  SALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA-----STALLD------------ 135
              VR    E+A  ++++M  +  +     ++ + +A     +  LLD            
Sbjct: 275 DGYVRLSRLEEACKLFDEMPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTA 334

Query: 136 VEHGRRCHGLV-----IKIGLDKNIYVA-NALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
           + HG     +V     I  G++ +  V  N ++S Y + G  + A+ +F+ M   + V++
Sbjct: 335 LMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSW 394

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES----DVFAQ 245
             M++G A+  ++ +A+ +FR M RK    ++VS +SV+    + G  V++     +  +
Sbjct: 395 NTMIAGYAQGGQMRKAIGIFRRMSRK----NTVSWNSVISGFVQNGLFVDAFHHFMLMRR 450

Query: 246 SDNKFSRNVH---------------GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
             N+   + +               G+Q+H L ++ G   DL   N+L+  YAK G M  
Sbjct: 451 GTNRADWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLE 510

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A+ IF  +  + +VSWN ++ GY    Q T+AI + + M++ G  PDEVT + +L AC R
Sbjct: 511 AKQIFDEMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSR 570

Query: 351 SGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           +G I  G   F+SM       P    +  M     ++    EA +L + MQ   ++P+  
Sbjct: 571 AGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQ---IQPNAG 627

Query: 406 TLAIILSSC 414
               +L +C
Sbjct: 628 VWGALLGAC 636



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 131/277 (47%), Gaps = 12/277 (4%)

Query: 9   LLHAHILRN------GLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSW 57
           L+H ++ RN       +FD     DT   N +I  Y +      A  LF +MP+KD  SW
Sbjct: 335 LMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSW 394

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +++   +   +  A  +F  M  +N VSWN++IS  V+NGL   A   +  M      
Sbjct: 395 NTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNR 454

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
               T AS  +A   L  +  GR+ H L+++ G   +++  NAL+S YAKCG    A  +
Sbjct: 455 ADWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQI 514

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+EM   + V++ A++ G A   +  EA+ +FR M    V  D V+   +L  C+R G  
Sbjct: 515 FDEMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLI 574

Query: 238 VESDVFAQS-DNKFSRNVHGQQVHCLTIKLGFEADLH 273
            E   F  S   ++S     +   C+   LG    L+
Sbjct: 575 DEGLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLN 611



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 5/115 (4%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           HV G+ LH+ ++R+G  +D F  N LI  Y+KC     A+ +FD+M  KDI SWNA++  
Sbjct: 474 HV-GRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWNALVDG 532

Query: 64  QCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE 114
              +     A  +F EM    V    V++  ++SA  R GL ++ L  +N M+ E
Sbjct: 533 YASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEE 587


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  365 bits (938), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 213/650 (32%), Positives = 337/650 (51%), Gaps = 62/650 (9%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           ++IY  N LL+  +K G    A  +F++M + +E ++  M+S      R+VEA E+F   
Sbjct: 63  ESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGC 122

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVES-DVF------AQSDNKFSRNV----------- 254
              +        S + G C + GC VE+ D+F          ++F+              
Sbjct: 123 ---SCKSSITWSSIISGYC-KFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLI 178

Query: 255 -HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ERSVVSWNVMIA 311
             G+ +H   +K GFE ++ +   L+DMYAK   +  AE +F  L    ++ V W  M+ 
Sbjct: 179 QTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVT 238

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------------- 348
           GY Q     KA+E  + M + G E ++ T   +L AC                       
Sbjct: 239 GYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGS 298

Query: 349 ------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                        + GD+K  + M ++M    V SWN+++  + +    +EA++LF+ M 
Sbjct: 299 NVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMH 358

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
            R +K D  T   +L+ C    I  + K VH   +KT       V++ L+ +Y+K    +
Sbjct: 359 GRNMKIDDYTFPSVLNCCVVGSI--NPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMD 416

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A  VF ++ E D++ W S++ G + N+   E+   F  MR   + P QF  A++LS+CA
Sbjct: 417 CAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACA 476

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
           +L+    G+QVH    K G      V ++L+ MY KCG +  A   F  M  K+ +TW  
Sbjct: 477 ELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTA 536

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDH 636
           +I GYAQNG G  +++ Y  M++SG +PD ITF+ +L ACSH+GLVD G + F  M   +
Sbjct: 537 IIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVY 596

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA 696
           G++P  +HY CMID  GR+G   EA+ L+D+M  K D  +W+ LLS+CR+H N+ LA+RA
Sbjct: 597 GIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERA 656

Query: 697 AEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A  LF L+P N+ PY +L+N+YS+  +W+D+  +R+LM    IVK+P  S
Sbjct: 657 ATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCS 706



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 167/606 (27%), Positives = 302/606 (49%), Gaps = 59/606 (9%)

Query: 13  HILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEF 72
           H      ++  +  N+L+   SK    + A+ LFDKMP KD YSWN ++S+      L  
Sbjct: 55  HTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVE 114

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A +LFD    ++ ++W+++IS   + G + +A  ++  M  EG+  +  TL SV +  ++
Sbjct: 115 ARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSS 174

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE--EMSEPNEVTFT 190
           L  ++ G   HG V+K G + N++V   L+ +YAKC     A  +F+  E    N V +T
Sbjct: 175 LGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWT 234

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           AM++G A+     +A+E FR M  + V  +  +  ++L  C        S V A+     
Sbjct: 235 AMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTAC--------SSVLAR----- 281

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
                G+QVH   +K GF +++++ ++L+DMYAK GD+ +A+ +   + +  VVSWN ++
Sbjct: 282 ---CFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLM 338

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------------- 349
            G+ +     +A+ L + M     + D+ T  ++L  CV                     
Sbjct: 339 VGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENY 398

Query: 350 ------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                       ++GD+     +F+ M    V SW ++++ Y+Q+ +H+E++K+F +M+ 
Sbjct: 399 KLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRV 458

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
            GV PD+  +A ILS+CA + +LE GKQVH   +K+       V + L+ +Y+KC   + 
Sbjct: 459 TGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDD 518

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A+ +F  +   D++ W ++I G + N     +  F+  M  +   P   +F  +L +C+ 
Sbjct: 519 ADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSH 578

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVG----SALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
                +GR+   Q+ K   V  I  G    + +I+++ + G +  A+Q  D M  K   T
Sbjct: 579 AGLVDEGRKYFQQMNK---VYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDAT 635

Query: 574 -WNEMI 578
            W  ++
Sbjct: 636 VWKSLL 641



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 206/455 (45%), Gaps = 82/455 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+++H  +++NG   + F+   L+++Y+KC     A+ LF  +                
Sbjct: 180 TGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGL---------------- 223

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                        E   +N V W  +++   +NG   KA+  +  M  +G      T  +
Sbjct: 224 -------------EFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPT 270

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A +++L    G + HG ++K G   N+YV +AL+ +YAKCG  K+A  + E M + +
Sbjct: 271 ILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDD 330

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ ++M G  +     EAL +F+ M  + + ID  +  SVL  C              
Sbjct: 331 VVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV------------- 377

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                  +++ + VH L IK GFE    +SN+L+DMYAK GDMD A  +F  + E+ V+S
Sbjct: 378 -----VGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVIS 432

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
           W  ++ GY Q     +++++   M+  G  PD+    ++L AC     ++ G++      
Sbjct: 433 WTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFI 492

Query: 360 -----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +F SM    V +W A++  Y+Q+   + ++K
Sbjct: 493 KSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLK 552

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
            +  M   G +PD  T   +L +C+  G+++ G++
Sbjct: 553 FYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRK 587



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 202/424 (47%), Gaps = 57/424 (13%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A   G+ +H  I+++G   + ++ + L+++Y+KC +  +A+++ + M   D+ SWN+   
Sbjct: 280 ARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNS--- 336

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                       L+   VR+GLEE+AL ++  M          T
Sbjct: 337 ----------------------------LMVGFVRHGLEEEALRLFKNMHGRNMKIDDYT 368

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
             SV   +  ++   + +  HGL+IK G +    V+NAL+ +YAK G    A  VFE+M 
Sbjct: 369 FPSVL--NCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKML 426

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           E + +++T++++G A+ +   E+L++F  M    V+ D   ++S+L  CA          
Sbjct: 427 EKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACA---------- 476

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                 + +    G+QVH   IK G      + NSL+ MYAK G +D A+ IF ++  + 
Sbjct: 477 ------ELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKD 530

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           V++W  +I GY Q  +   +++    M S G  PD +T I +L AC  +G +  GR+ F 
Sbjct: 531 VITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQ 590

Query: 363 SMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
            M       P    +  M+  + +S    EA +L  +M    VKPD T    +LS+C   
Sbjct: 591 QMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMD---VKPDATVWKSLLSACRVH 647

Query: 418 GILE 421
             LE
Sbjct: 648 ENLE 651


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 216/642 (33%), Positives = 335/642 (52%), Gaps = 54/642 (8%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H L IK G   +IY AN ++S YAKCG  + A  +F E S+ + V++  M++G       
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
             ALE  + M R   ++D  S  S+L   A  G  VE                GQQVH +
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGY-VEV---------------GQQVHSM 125

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            +K+G+E ++   ++LLDMYAK   ++ A  +F ++  R+ V+WN +I+GY Q      A
Sbjct: 126 MVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTA 185

Query: 323 IELLQRMKSCGFEPDE------------------VTSIN-----------------MLVA 347
             LL  M+  G E D+                   T ++                 ++ A
Sbjct: 186 FWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITA 245

Query: 348 CVRSGDIKTGREMFD-SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
               G I+    +FD ++ +  + +WN+ML++Y  +   +EA +LF EMQ  G +PD  T
Sbjct: 246 YSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYT 305

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE--RVFHR 464
              ++S+         GK +H   +K        +++ LI +Y K     + E   +F  
Sbjct: 306 YTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFES 365

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           +   D V WNS++ G S + L  +A  FF+ MR   +    ++F+ VL SC+ L++   G
Sbjct: 366 LENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLG 425

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           +QVH  + K G+  + FV S+LI MY KCG I  AR+ FD     +++ WN +I GYAQ+
Sbjct: 426 QQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQH 485

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G G  A+ L+  M    VK D ITFVA+LTACSH GLV+ G     SM+ D+G+ P ++H
Sbjct: 486 GRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEH 545

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y CMID LGRAG   EA+ LI+ MP + D ++W+ LL +CR   ++ LA + A  L  L+
Sbjct: 546 YACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELE 605

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           P+    Y LL++++  L RW++  +++ LM E  + K P +S
Sbjct: 606 PEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWS 647



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 242/519 (46%), Gaps = 54/519 (10%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           IY+ N I+S   K  ++  A K+F E  +R+ VSWN +I+  V  G  E AL     M  
Sbjct: 34  IYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKR 93

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
            GF     +  S+ K    +  VE G++ H +++K+G + N++  +ALL +YAKC   + 
Sbjct: 94  YGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVED 153

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           A  VF+ ++  N VT+ A++SG A+      A  +   M  + V ID  + +        
Sbjct: 154 AFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAP------- 206

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
               + + +     +K +      QVH   +K G  +D  + N+++  Y++ G ++ AE 
Sbjct: 207 ----LLTLLDDPDLHKLT-----TQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAER 257

Query: 294 IFSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
           +F    E R +V+WN M+A Y    Q  +A +L   M+  GFEPD  T  +++ A     
Sbjct: 258 VFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGS 317

Query: 353 D-----------IKTGRE--------------------------MFDSMPSPSVSSWNAM 375
                       IK G E                          +F+S+ +    SWN++
Sbjct: 318 HQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSI 377

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           L+ +SQS   ++A+K F  M+ + V  D    + +L SC+ +  L+ G+QVH   LK+  
Sbjct: 378 LTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGF 437

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
             + +VAS LI +YSKC   E A + F   P+   + WNS+I G + +     A   F  
Sbjct: 438 EPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFL 497

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           M+   +     +F  VL++C+ +    +G      +E D
Sbjct: 498 MKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESD 536



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 230/486 (47%), Gaps = 40/486 (8%)

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S + F+        HCL IK G  A ++ +N+++  YAK G++  A  +F    +R  VS
Sbjct: 8   SQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVS 67

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML--VACV-------------- 349
           WN MIAG+        A+E L+ MK  GF  D  +  ++L  VACV              
Sbjct: 68  WNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMV 127

Query: 350 ---RSGDIKTGR----------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                G++  G                 E+F S+   +  +WNA++S Y+Q  +   A  
Sbjct: 128 KMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFW 187

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           L   M+  GV+ D  T A +L+      + +   QVHA  +K     D  V + +I  YS
Sbjct: 188 LLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYS 247

Query: 451 KCQRNELAERVFH-RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +C   E AERVF   I   D+V WNSM+A   +N+ + EAF  F +M+     P  +++ 
Sbjct: 248 ECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYT 307

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK--CGDIYGARQFFDMMH 567
           +V+S+  + S   QG+ +H  + K G    + + ++LI MY K     +  A   F+ + 
Sbjct: 308 SVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLE 367

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            K+ V+WN ++ G++Q+G  ++A++ +++M +  V  D   F A+L +CS    + +G +
Sbjct: 368 NKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQ 427

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           + + + L  G EP     + +I    + G   +A    D  P KD  + W  L+     H
Sbjct: 428 V-HVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATP-KDSSIAWNSLIFGYAQH 485

Query: 688 ANVRLA 693
              ++A
Sbjct: 486 GRGKIA 491



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 210/448 (46%), Gaps = 60/448 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA I+++GL  DT +CN +I  YS+C +   A+                          
Sbjct: 223 VHAKIVKHGLASDTTVCNAIITAYSECGSIEDAE-------------------------- 256

Query: 70  LEFAYKLFDEMPE-RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
                ++FD   E R++V+WN++++A + N  EE+A  ++ +M   GF P   T  SV  
Sbjct: 257 -----RVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVIS 311

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC--GWTKHAVPVFEEMSEPNE 186
           A+        G+  HGLVIK GL+  + ++N+L+++Y K        A+ +FE +   + 
Sbjct: 312 AAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDH 371

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ ++++G +++    +AL+ F  M  + V ID  + S+VL  C+              
Sbjct: 372 VSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCS-------------- 417

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    GQQVH L +K GFE +  +++SL+ MY+K G ++ A   F   P+ S ++W
Sbjct: 418 --DLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAW 475

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N +I GY Q  +   A++L   MK    + D +T + +L AC   G ++ G     SM S
Sbjct: 476 NSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMES 535

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +  M+    ++    EA  L   M F   +PD      +L +C   G +E
Sbjct: 536 DYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPF---EPDAMVWKTLLGACRTCGDIE 592

Query: 422 SGKQV--HAASLKTASHIDNYVASGLIG 447
              QV  H   L+   H    + S + G
Sbjct: 593 LASQVASHLLELEPEEHCTYVLLSSMFG 620



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/514 (23%), Positives = 219/514 (42%), Gaps = 91/514 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+ +++ G   + F  + L+++Y+KC     A  +F  +  ++  +WNA++S   +
Sbjct: 119 GQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQ 178

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D   A+ L D                                M  EG      T A +
Sbjct: 179 VGDRGTAFWLLD-------------------------------CMELEGVEIDDGTFAPL 207

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                     +   + H  ++K GL  +  V NA+++ Y++CG  + A  VF+   E  +
Sbjct: 208 LTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRD 267

Query: 187 -VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+ +M++     ++  EA ++F  M       D  + +SV+   A EG          
Sbjct: 268 LVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVIS-AAFEG---------- 316

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK--NGDMDSAEVIFSNLPERSV 303
                S    G+ +H L IK G E  + +SNSL+ MY K  +  MD A  IF +L  +  
Sbjct: 317 -----SHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDH 371

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKS-------------------------------- 331
           VSWN ++ G+ Q   S  A++  + M+S                                
Sbjct: 372 VSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVL 431

Query: 332 ---CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
               GFEP+   + +++    + G I+  R+ FD+ P  S  +WN+++  Y+Q    K A
Sbjct: 432 VLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIA 491

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG---KQVHAASLKTASHIDNYVASGL 445
           + LF  M+ R VK D  T   +L++C+ +G++E G    +   +       +++Y    +
Sbjct: 492 LDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYAC--M 549

Query: 446 IGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
           I +  +  R + A+ +   +P E D + W +++ 
Sbjct: 550 IDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLG 583



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 17/222 (7%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +L++G   + F+ + LI +YSKC     A+  FD  P     +WN+++    +
Sbjct: 425 GQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQ 484

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
               + A  LF  M +R V    +++  +++A    GL E+  S    M ++  +P  + 
Sbjct: 485 HGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRM- 543

Query: 123 LASVFKASTALLDV--EHGR--RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
                +    ++D+    GR      L+  +  + +  V   LL     CG  + A  V 
Sbjct: 544 -----EHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVA 598

Query: 179 EEM--SEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
             +   EP E  T+  + S      R  E   + RLM  + V
Sbjct: 599 SHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGV 640


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 202/625 (32%), Positives = 322/625 (51%), Gaps = 52/625 (8%)

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKA 216
           +N  L    K G   +A  +F++MS+ +E+++T ++SG    +   EAL +F+ M +   
Sbjct: 52  SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           + ID   LS      A + CG+ SDV            +G+ +H   +K G    + + +
Sbjct: 112 LRIDPFILS-----LAHKACGLNSDV-----------NYGELLHGYAVKTGLVNSVFVGS 155

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +LLDMY KNG +     +F  +P R+VVSW  +I G  +   + +A+     M     E 
Sbjct: 156 ALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEY 215

Query: 337 DEVTSINMLVACVRSGDIKTGRE-----------------------------------MF 361
           D  T    L AC  SG +  GRE                                   +F
Sbjct: 216 DSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLF 275

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           + M    V SW  ++++  Q    + A++ F  M+   V P+  T A ++S CA +  +E
Sbjct: 276 EKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIE 335

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G+Q+HA  L         V + ++ +Y+KC +   +  +FH +   DIV W+++IAG  
Sbjct: 336 WGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYX 395

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
                 EAF     MR     PT+F+ A+VLS+C  ++    G+Q+HA +   G  +   
Sbjct: 396 QGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAM 455

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           V SALI MYCKCG I  A + FD     + V+W  MI+GYA++GY  E + L++ +   G
Sbjct: 456 VLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVG 515

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           ++PD +TF+ +L+ACSH+GLVD+G   FN+M   + + P  +HY CMID L RAG   +A
Sbjct: 516 LRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDA 575

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           E +I+ MP   D V+W  LL +CR+H +V   +R AE + +L+P  +  +  LANIY+S 
Sbjct: 576 EHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASK 635

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           G+W +   +R+LM    ++K+P +S
Sbjct: 636 GKWREAADIRKLMKSKGVIKEPGWS 660



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 160/587 (27%), Positives = 250/587 (42%), Gaps = 73/587 (12%)

Query: 49  MPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY 108
           +   D+   N  L    K+  L  A ++FD+M +++ +SW  LIS  V      +AL ++
Sbjct: 44  ISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLF 103

Query: 109 NKMSNE-GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
             M  E G       L+   KA     DV +G   HG  +K GL  +++V +ALL +Y K
Sbjct: 104 KNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTK 163

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
            G       VF EM   N V++TA+++GL +     EAL  F  M R  V  DS + +  
Sbjct: 164 NGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIA 223

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           L  CA  G               + N +G+++H   +K GF+    ++N+L  MY K G 
Sbjct: 224 LKACADSG---------------ALN-YGREIHAQAMKKGFDVSSFVANTLATMYNKCGK 267

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           ++    +F  +  R VVSW  +I    Q  Q   A++   RM+     P+E T   ++  
Sbjct: 268 LEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISG 327

Query: 348 CVRSGDIKTGREM-----------------------------------FDSMPSPSVSSW 372
           C     I+ G ++                                   F  M    + SW
Sbjct: 328 CANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSW 387

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           + +++ Y Q  +  EA +L   M+  G KP    LA +LS+C  M ILE GKQ+HA  L 
Sbjct: 388 STIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLS 447

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                   V S LI +Y KC   E A R+F      DIV W +MI G + +    E    
Sbjct: 448 IGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDL 507

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLS------SSFQGRQVHAQI--EKDGYVNDIFVGS 544
           F+++ +  + P   +F  VLS+C+           F       QI   K+ Y        
Sbjct: 508 FEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHY-------G 560

Query: 545 ALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEM-----IHGYAQNG 585
            +I++ C+ G +  A    + M   ++ V W+ +     +HG  + G
Sbjct: 561 CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERG 607



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 233/490 (47%), Gaps = 48/490 (9%)

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           ++  V  +S++  S+N+H             + DL  SN  L    K G + +A  +F  
Sbjct: 25  IDLQVLERSNDNLSQNIH----------FISQTDLPESNKQLKELVKTGHLGNARRMFDK 74

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-----------------KSCGFEPDE-- 338
           + ++  +SW  +I+GY     S++A+ L + M                 K+CG   D   
Sbjct: 75  MSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNY 134

Query: 339 -------------VTSI----NMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                        V S+     +L    ++G I  GR +F  MP  +V SW A+++   +
Sbjct: 135 GELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVR 194

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +  +KEA+  F EM    V+ D  T AI L +CA  G L  G+++HA ++K    + ++V
Sbjct: 195 AGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFV 254

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
           A+ L  +Y+KC + E    +F ++   D+V W ++I  L     +  A   F +MR++++
Sbjct: 255 ANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDV 314

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P +++FA V+S CA L+    G Q+HA I   G    + V ++++ MY KCG +  +  
Sbjct: 315 SPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSV 374

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F  M  ++ V+W+ +I GY Q G+  EA  L   M   G KP +    ++L+AC +  +
Sbjct: 375 IFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAI 434

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           ++ G ++ ++  L  G+E      + +I+   + G   EA  + D     DD V W  ++
Sbjct: 435 LEHGKQL-HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAE-NDDIVSWTAMI 492

Query: 682 SSCRLHANVR 691
           +    H   R
Sbjct: 493 NGYAEHGYSR 502



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 232/508 (45%), Gaps = 84/508 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+LLH + ++ GL +  F+ + L+++Y+K       +                       
Sbjct: 135 GELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR----------------------- 171

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++F EMP RNVVSW  +I+ LVR G  ++AL  +++M          T A  
Sbjct: 172 --------RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIA 223

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA      + +GR  H   +K G D + +VAN L ++Y KCG  ++ + +FE+MS  + 
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDV 283

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T +++ L +  +   A++ F  M    VS +  + ++V+  CA              
Sbjct: 284 VSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCA-------------- 329

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +R   G+Q+H L + LG  A L + NS++ MYAK G + S+ VIF  +  R +VSW
Sbjct: 330 --NLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSW 387

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           + +IAGY Q    ++A ELL  M+  G +P E    ++L AC                  
Sbjct: 388 STIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLS 447

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G I+    +FD+  +  + SW AM++ Y++    +E I L
Sbjct: 448 IGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDL 507

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESG-KQVHAASLKTASHIDNYVASGLIGIYS 450
           F ++   G++PD  T   +LS+C+  G+++ G    +A S K            +I +  
Sbjct: 508 FEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLC 567

Query: 451 KCQRNELAERVFHRIP-ELDIVCWNSMI 477
           +  R   AE +   +P   D V W++++
Sbjct: 568 RAGRLSDAEHMIEAMPFHRDDVVWSTLL 595



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 193/425 (45%), Gaps = 55/425 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA  ++ G    +F+ N L  +Y+KC                              
Sbjct: 236 GREIHAQAMKKGFDVSSFVANTLATMYNKCGK---------------------------- 267

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              LE+   LF++M  R+VVSW  +I+ LV+ G EE A+  + +M      P   T A+V
Sbjct: 268 ---LEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAV 324

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 L  +E G + H L++ +GL  ++ V N+++++YAKCG    +  +F EM+  + 
Sbjct: 325 ISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDI 384

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++ +++G  +   V EA E+   M  +       +L+SVL  C               
Sbjct: 385 VSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACG-------------- 430

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +   HG+Q+H   + +G E    + ++L++MY K G ++ A  IF       +VSW
Sbjct: 431 --NMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSW 488

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             MI GY +   S + I+L +++   G  PD VT I +L AC  +G +  G   F++M  
Sbjct: 489 TAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSK 548

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               SPS   +  M+    ++    +A  +   M F     D    + +L +C   G +E
Sbjct: 549 KYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFH---RDDVVWSTLLRACRVHGDVE 605

Query: 422 SGKQV 426
            G++ 
Sbjct: 606 RGRRT 610


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 200/591 (33%), Positives = 315/591 (53%), Gaps = 51/591 (8%)

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           M+ G AK+  +  AL  F  M   +V     + + +L +C              SD K  
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGD-----------NSDLKRG 49

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
           + +HG       I  GF  +L     +++MYAK   ++ A  +F  +PER +V WN MI+
Sbjct: 50  KEIHGS-----VITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMIS 104

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------------- 349
           GY Q   +  A+ L+ RM   G  PD +T +++L A                        
Sbjct: 105 GYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFES 164

Query: 350 -------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                        + G +   R +FD M   +V SWN+M+  Y QS + + A+ +F++M 
Sbjct: 165 LVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKML 224

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
             GV+P   T+   L +CA +G LE GK VH    +     D  V + LI +YSKC+R +
Sbjct: 225 DEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVD 284

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
           +A  +F  +    +V WN+MI G + N    EA   F +M+   + P  F+  +V+ + A
Sbjct: 285 IAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALA 344

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
           +LS   Q + +H  + +     ++FV +AL++MY KCG I+ AR+ FDMM+ ++ +TWN 
Sbjct: 345 ELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNA 404

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDH 636
           MI GY  +G G  +V L+K+M    +KP+DITF+  L+ACSHSGLV+ G+  F SM+ D+
Sbjct: 405 MIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDY 464

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA 696
           G+EP +DHY  M+D LGRAG  ++A   I +MP K    ++  +L +C++H NV L ++A
Sbjct: 465 GIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKA 524

Query: 697 AEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           A E+F+L+P +   + LLANIY++   W  +  VR +M ++ + K P  SL
Sbjct: 525 AFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSL 575



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 236/508 (46%), Gaps = 52/508 (10%)

Query: 102 EKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANAL 161
           + ALS +++M ++   P       + K      D++ G+  HG VI  G   N++    +
Sbjct: 12  DSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGV 71

Query: 162 LSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDS 221
           +++YAKC     A  +F+ M E + V +  M+SG A+      AL +   M  +    DS
Sbjct: 72  VNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDS 131

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDM 281
           +++ S+L               A +D +  R   G  VH   ++ GFE+ +++S +L+DM
Sbjct: 132 ITIVSILP--------------AVADTRLLRI--GMAVHGYVLRAGFESLVNVSTALVDM 175

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           Y+K G +  A VIF  +  R+VVSWN MI GY Q   +  A+ + Q+M   G +P  VT 
Sbjct: 176 YSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTV 235

Query: 342 INMLVACVRSGDIKTGR-----------------------------------EMFDSMPS 366
           +  L AC   GD++ G+                                   ++F ++ +
Sbjct: 236 MGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRN 295

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
            ++ SWNAM+  Y+Q+    EA+  F EMQ R +KPD  T+  ++ + A + I    K +
Sbjct: 296 KTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWI 355

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H   ++     + +V + L+ +Y+KC     A ++F  +    ++ WN+MI G   + L 
Sbjct: 356 HGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLG 415

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSA 545
             +   FK+M++  + P   +F   LS+C+      +G      ++KD G    +    A
Sbjct: 416 KTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGA 475

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           ++++  + G +  A  F   M  K  +T
Sbjct: 476 MVDLLGRAGRLNQAWDFIQKMPIKPGIT 503



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 196/409 (47%), Gaps = 56/409 (13%)

Query: 55  YSWN-----AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN 109
           +SWN      +++   K   +  AY +FD MPER++V WN +IS   +NG  + AL +  
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 110 KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           +MS EG  P  IT+ S+  A      +  G   HG V++ G +  + V+ AL+ +Y+KCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
               A  +F+ M     V++ +M+ G  ++     A+ +F+ M+ + V   +V++   L 
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            CA  G                R   G+ VH L  +L  ++D+ + NSL+ MY+K   +D
Sbjct: 241 ACADLG-------------DLER---GKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVD 284

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC- 348
            A  IF NL  +++VSWN MI GY Q     +A+     M+S   +PD  T ++++ A  
Sbjct: 285 IAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALA 344

Query: 349 ----------------------------------VRSGDIKTGREMFDSMPSPSVSSWNA 374
                                              + G I T R++FD M +  V +WNA
Sbjct: 345 ELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNA 404

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M+  Y      K +++LF+EM+   +KP+  T    LS+C+  G++E G
Sbjct: 405 MIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEG 453



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 197/413 (47%), Gaps = 55/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H ++LR G      +   L+++YSKC +   A+ +FD M H               
Sbjct: 150 GMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDH--------------- 194

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                           R VVSWN++I   V++G  E A+ ++ KM +EG  PT++T+   
Sbjct: 195 ----------------RTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGA 238

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L D+E G+  H LV ++ LD ++ V N+L+S+Y+KC     A  +F+ +     
Sbjct: 239 LHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ AM+ G A+   V EAL  F  M  + +  DS ++ SV+   A              
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALA-------------- 344

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             + S     + +H L I+   + ++ +  +L+DMYAK G + +A  +F  +  R V++W
Sbjct: 345 --ELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITW 402

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N MI GYG       ++EL + MK    +P+++T +  L AC  SG ++ G   F+SM  
Sbjct: 403 NAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKK 462

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                P++  + AM+    ++    +A    ++M    +KP  T    +L +C
Sbjct: 463 DYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMP---IKPGITVYGAMLGAC 512



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 160/377 (42%), Gaps = 43/377 (11%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+   N+++S   K   ++ A  +F  +  + +VSWN +I    +NG   +AL+ + +M 
Sbjct: 266 DVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQ 325

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           +    P   T+ SV  A   L      +  HGLVI+  LDKN++V  AL+ +YAKCG   
Sbjct: 326 SRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIH 385

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +F+ M+  + +T+ AM+ G         ++E+F+ M +  +  + ++    L  C+
Sbjct: 386 TARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACS 445

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G   E   F +S  K                 G E  +    +++D+  + G ++ A 
Sbjct: 446 HSGLVEEGLCFFESMKK---------------DYGIEPTMDHYGAMVDLLGRAGRLNQAW 490

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE-----PDE----VTSIN 343
                +P +  ++       YG    + K  + +   +   FE     PD+    V   N
Sbjct: 491 DFIQKMPIKPGITV------YGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLAN 544

Query: 344 MLVACVRSGDIKTGREMFD-----SMPSPS-VSSWNAMLSSYSQSENHKEAIKLFR---- 393
           +       G +   R + +       P  S V   N + S YS + +H ++ K++     
Sbjct: 545 IYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLET 604

Query: 394 ---EMQFRGVKPDRTTL 407
              E++  G  PD  ++
Sbjct: 605 LVDEIRAAGYVPDTNSI 621


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  365 bits (937), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 211/639 (33%), Positives = 333/639 (52%), Gaps = 56/639 (8%)

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
            +IK G          ++SL+ K G    A  VFE +    +V +  M+ G AK   + +
Sbjct: 69  FIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGD 128

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           AL  F  M+      D V L      C  + CG   D+             G+++H L I
Sbjct: 129 ALCFFLRMM-----CDEVRLVVGDYACLLQLCGENLDL-----------KKGREIHGLII 172

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
             GFE++L +  +++ +YAK   +D+A  +F  +  + +VSW  ++AGY Q   + +A++
Sbjct: 173 TNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQ 232

Query: 325 LLQRMKSCGFEPDEVTSINMLVACV----------------------------------- 349
           L+ +M+  G +PD VT +++L A                                     
Sbjct: 233 LVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYF 292

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           + G  +  R +F  M S +V SWN M+   +Q+   +EA   F +M   G  P R T+  
Sbjct: 293 KCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMG 352

Query: 410 ILSSCAAMGILESGKQVHAA--SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           +L +CA +G LE G  VH     LK  S++   V + LI +YSKC+R ++A  +F+ + +
Sbjct: 353 VLLACANLGDLERGWFVHKLLDKLKLDSNVS--VMNSLISMYSKCKRVDIAASIFNNLEK 410

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            + V WN+MI G + N    EA   F  M+   +    F+   V+++ A  S + Q + +
Sbjct: 411 TN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWI 469

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H    +    N++FV +AL++MY KCG I  AR+ FDMM  ++ +TWN MI GY  +G G
Sbjct: 470 HGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVG 529

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
            E + L+ +M    VKP+DITF+++++ACSHSG V+ G+ +F SMQ D+ +EP +DHY+ 
Sbjct: 530 KETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSA 589

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
           M+D LGRAG   +A   I EMP K    +   +L +C++H NV L ++AA++LF+LDP  
Sbjct: 590 MVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDE 649

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
              + LLANIY+S   WD +  VR  M +  + K P  S
Sbjct: 650 GGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCS 688



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 259/543 (47%), Gaps = 53/543 (9%)

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           ++S  CK      A ++F+ +  +  V ++ ++    +N     AL  + +M  +     
Sbjct: 85  VISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLV 144

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
               A + +     LD++ GR  HGL+I  G + N++V  A++SLYAKC    +A  +FE
Sbjct: 145 VGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFE 204

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            M   + V++T +++G A+      AL++   M       DSV+L S+L           
Sbjct: 205 RMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILP---------- 254

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
               A +D K  R   G+ +H    + GFE+ ++++N+LLDMY K G    A ++F  + 
Sbjct: 255 ----AVADMKALRI--GRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMR 308

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG-- 357
            ++VVSWN MI G  Q  +S +A     +M   G  P  VT + +L+AC   GD++ G  
Sbjct: 309 SKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWF 368

Query: 358 ---------------------------------REMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                              +F+++   +V +WNAM+  Y+Q+  
Sbjct: 369 VHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGC 427

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            KEA+ LF  MQ +G+K D  TL  ++++ A   +    K +H  +++     + +V++ 
Sbjct: 428 VKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTA 487

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           L+ +Y+KC   + A ++F  + E  ++ WN+MI G   + +  E    F +M++  + P 
Sbjct: 488 LVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPN 547

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDIYGARQFF 563
             +F +V+S+C+      +G  +   +++D Y+       SA++++  + G +  A  F 
Sbjct: 548 DITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFI 607

Query: 564 DMM 566
             M
Sbjct: 608 QEM 610



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 207/429 (48%), Gaps = 56/429 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H +  R+G      + N L+++Y KC +   A+ +F  M  K + SWN   
Sbjct: 260 KALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNT-- 317

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                        +I    +NG  E+A + + KM +EG VPT +
Sbjct: 318 -----------------------------MIDGCAQNGESEEAFATFLKMLDEGEVPTRV 348

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+  V  A   L D+E G   H L+ K+ LD N+ V N+L+S+Y+KC     A  +F  +
Sbjct: 349 TMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL 408

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + N VT+ AM+ G A+   V EAL +F +M  + + +D  +L  V+   A         
Sbjct: 409 EKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALA--------- 458

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                   FS N   + +H L ++   + ++ +S +L+DMYAK G + +A  +F  + ER
Sbjct: 459 -------DFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQER 511

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
            V++WN MI GYG      + ++L   M+    +P+++T ++++ AC  SG ++ G  +F
Sbjct: 512 HVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLF 571

Query: 362 DSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            SM       P++  ++AM+    ++    +A    +EM    +KP  + L  +L +C  
Sbjct: 572 KSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMP---IKPGISVLGAMLGACKI 628

Query: 417 MGILESGKQ 425
              +E G++
Sbjct: 629 HKNVELGEK 637



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 202/452 (44%), Gaps = 83/452 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  I+ NG   + F+   ++ LY+KC                              
Sbjct: 164 GREIHGLIITNGFESNLFVMTAVMSLYAKCRQ---------------------------- 195

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              ++ AYK+F+ M  +++VSW  L++   +NG  ++AL +  +M   G  P  +TL S+
Sbjct: 196 ---IDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSI 252

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   +  +  GR  HG   + G +  + V NALL +Y KCG  + A  VF+ M     
Sbjct: 253 LPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTV 312

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M+ G A+     EA   F  M+ +      V++  VL  CA  G  +E   F   
Sbjct: 313 VSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLG-DLERGWF--- 368

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                       VH L  KL  ++++ + NSL+ MY+K   +D A  IF+NL E++ V+W
Sbjct: 369 ------------VHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTW 415

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV-------------------- 346
           N MI GY Q     +A+ L   M+S G + D  T + ++                     
Sbjct: 416 NAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVR 475

Query: 347 ACV---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
           AC+               + G IKT R++FD M    V +WNAM+  Y      KE + L
Sbjct: 476 ACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDL 535

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           F EMQ   VKP+  T   ++S+C+  G +E G
Sbjct: 536 FNEMQKGAVKPNDITFLSVISACSHSGFVEEG 567



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 181/384 (47%), Gaps = 49/384 (12%)

Query: 45  LFDKMP-HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
           L DK+    ++   N+++S   K   ++ A  +F+ + + NV +WN +I    +NG  ++
Sbjct: 372 LLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKE 430

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC---HGLVIKIGLDKNIYVANA 160
           AL+++  M ++G      TL  V    TAL D    R+    HGL ++  +D N++V+ A
Sbjct: 431 ALNLFCMMQSQGIKLDCFTLVGVI---TALADFSVNRQAKWIHGLAVRACMDNNVFVSTA 487

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           L+ +YAKCG  K A  +F+ M E + +T+ AM+ G        E L++F  M + AV  +
Sbjct: 488 LVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPN 547

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
            ++  SV+  C+  G   E  +  +S          Q+ + L      E  +   ++++D
Sbjct: 548 DITFLSVISACSHSGFVEEGLLLFKS---------MQEDYYL------EPTMDHYSAMVD 592

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR--MKSCGFEPDE 338
           +  + G +D A      +P +  +S  V+ A  G   +  K +EL ++   K    +PDE
Sbjct: 593 LLGRAGQLDDAWNFIQEMPIKPGIS--VLGAMLGA-CKIHKNVELGEKAAQKLFKLDPDE 649

Query: 339 VTSINMLVACVRSGD--------IKTGREMFDSMPSPSVSSW----NAMLSSYSQSENHK 386
               ++L+A + + +        ++T  E      +P   SW    N + + YS S NH 
Sbjct: 650 -GGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGC-SWVELRNEIHTFYSGSTNHP 707

Query: 387 EAIKLFR-------EMQFRGVKPD 403
           E+ K++        E++  G  PD
Sbjct: 708 ESKKIYAFLETLGDEIKAAGYVPD 731



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 10/233 (4%)

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
             +Y  +     +L +C   +S  +  Q+   I K+G+ N+    + +I ++CK G    
Sbjct: 41  TRVYSHRHPSVVLLENC---TSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSE 97

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A + F+ +  K  V ++ M+ GYA+N    +A+  +  M+   V+     +  +L  C  
Sbjct: 98  AARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGE 157

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
           +  +  G EI + + + +G E  L   T ++    +      A  + + M  K D V W 
Sbjct: 158 NLDLKKGREI-HGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHK-DLVSWT 215

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
            L++    +A    AKRA + + ++      P S+   + S L    D++A+R
Sbjct: 216 TLVAG---YAQNGHAKRALQLVLQMQEAGQKPDSV--TLVSILPAVADMKALR 263


>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
          Length = 669

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 212/648 (32%), Positives = 338/648 (52%), Gaps = 53/648 (8%)

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW---TKHAVPVFEEMSEPNEVTFTAMMS 194
           H    HG +++  L  + +VA  L++L A        ++A  VF+ M++PN   +  M+ 
Sbjct: 32  HLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIR 91

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G +  +   +AL +FR M R+ VS D+ ++++V            S   A +  K+  N 
Sbjct: 92  GYSSCEAPRDALAVFREMRRRGVSPDNYTMAAV-----------VSASAAFAGLKWRSN- 139

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G  +H L  ++GF +D+ + + L++ Y     ++ A  +F  + ER VVSW  MI+   
Sbjct: 140 -GDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACA 198

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------- 358
           Q     K +++L  M++ G  P++VT I++L AC ++  +  GR                
Sbjct: 199 QCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVD 258

Query: 359 -------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                              E F +MP+    SWN ++  + Q+  HKEA+++F EM   G
Sbjct: 259 IRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHG 318

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V PD  TL  +LS+CA +G L  G  VH+         DN + + LI +Y+KC     AE
Sbjct: 319 VTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAE 378

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           RVF  + + D+V W  M+ G         AF  F++M+  E+   + +  ++LS+C++L 
Sbjct: 379 RVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLG 438

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +  +GR++H+ IE+     D+ + SAL++MY KCG I  A + F  M  K T++WN MI 
Sbjct: 439 ALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIG 498

Query: 580 GYAQNGYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
           G A NGYG EAV L+  M+     KPD IT  A+L AC+H G+VD G+  F  M    GV
Sbjct: 499 GLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMS-SLGV 557

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
            P  +HY C++D LGRAG   EA   I +MP + +PVIW  LL++CR+H  + L K   +
Sbjct: 558 VPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQ 617

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +  + P +   + L++N+++   +WDD+  VR LM    I K P +S
Sbjct: 618 HIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHS 665



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/617 (25%), Positives = 271/617 (43%), Gaps = 86/617 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +AH+A   LH  ++R  L  D+F+  RLI                            A+L
Sbjct: 30  RAHLAE--LHGRLVRAHLTSDSFVAGRLI----------------------------ALL 59

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           ++     D+ +A K+FD M + N   WN +I           AL+V+ +M   G  P + 
Sbjct: 60  ASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNY 119

Query: 122 TLASVFKASTALLDVE---HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
           T+A+V  AS A   ++   +G   H LV +IG   +++V + L++ Y      + A  VF
Sbjct: 120 TMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVF 179

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           EEM E + V++T+M+S  A+     + L+M   M  + +  + V++ S+L  C +     
Sbjct: 180 EEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQ----- 234

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                 Q+ ++      G+ V+    K G EAD+ + N+L+ MY K G +  A   F  +
Sbjct: 235 -----TQAVDE------GRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAM 283

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG- 357
           P R   SWN +I G+ Q ++  +A+ + + M   G  PD +T +++L AC + G+++ G 
Sbjct: 284 PARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGM 343

Query: 358 ----------------------------------REMFDSMPSPSVSSWNAMLSSYSQSE 383
                                               +F +M    V SW  M+  Y +  
Sbjct: 344 HVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGH 403

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
               A  LF EM+   V      L  +LS+C+ +G L+ G+++H+   +     D  + S
Sbjct: 404 QFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLES 463

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMY 502
            L+ +Y+KC   + A  +F ++     + WN+MI GL+ N    EA   F QM +  +  
Sbjct: 464 ALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPK 523

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +   VL +CA +    +G +    +   G V D      ++++  + G +  A  F
Sbjct: 524 PDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHF 583

Query: 563 FDMMH-GKNTVTWNEMI 578
              M    N V W  ++
Sbjct: 584 IKKMPIEPNPVIWGSLL 600



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 227/514 (44%), Gaps = 94/514 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA + R G   D F+ + L+  Y    +   A  +F++M  +D+ SW +       
Sbjct: 140 GDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTS------- 192

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +ISA  + G  +K L + ++M  EG +P  +T+ S+
Sbjct: 193 ------------------------MISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISL 228

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      V+ GR  +  V K G++ ++ + NAL+S+Y KCG    A+  F+ M     
Sbjct: 229 LSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYT 288

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++  ++ G  +     EAL +F  M+   V+ D ++L SVL  CA+ G           
Sbjct: 289 KSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLG----------- 337

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             +  + +H   VH      G   D  L+NSL++MYAK GDM +AE +F  + ++ VVSW
Sbjct: 338 --ELRKGMH---VHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSW 392

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
            VM+ GY + +Q T A  L + MK       E+  +++L AC + G +  GR        
Sbjct: 393 TVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEE 452

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                      E+F  M      SWNAM+   + +   KEA++L
Sbjct: 453 MNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVEL 512

Query: 392 FREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVH--AASLKTASHIDNYVASGLIGI 448
           F +M + +  KPD  TL  +L +CA +G+++ G +     +SL      ++Y       I
Sbjct: 513 FDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGC-----I 567

Query: 449 YSKCQRNELAERVFHRIPELDI----VCWNSMIA 478
                R  + +  FH I ++ I    V W S++A
Sbjct: 568 VDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLA 601


>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial [Vitis vinifera]
          Length = 828

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 231/787 (29%), Positives = 385/787 (48%), Gaps = 102/787 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G++LH    + GL  D+FLCN LI++Y+KC    S++ +F  M +               
Sbjct: 92  GRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEY--------------- 136

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                           R+++SWN+++     N   +K+L  + KM+       +++L   
Sbjct: 137 ----------------RDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCA 180

Query: 127 FKASTALLDVEHGRRCHGLVIKIG---LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
             AS  L ++  G+  HG  IK+G   +  N +  N+L+SLY++C   + A  +F+EM  
Sbjct: 181 VSASALLGELSFGQVIHGWGIKLGYKDISHNSF-ENSLISLYSQCRDIQAAEILFKEMKY 239

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCA-----REGCG 237
            + V++ AM+ GLA   R+ EA ++   M +   V  DSV++  ++ +CA     REG  
Sbjct: 240 KDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREG-- 297

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                         R VHG     LT++     D  ++NSL+DMY+K  D+  AE +F  
Sbjct: 298 --------------RAVHG-----LTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKA 338

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAI----ELLQRMKSC--------------------- 332
           +PER +VSWN MI+GY Q   S +A     +LLQ    C                     
Sbjct: 339 IPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFG 398

Query: 333 ----------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPS-VSSWNAMLSSYSQ 381
                     GF  + +   ++++  +  GD+     +  ++ + + +  WN +++  +Q
Sbjct: 399 ESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQ 458

Query: 382 SENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           + +  EA+K F  M Q   V  D   L  ++S+C  + +L +G  +H  +LKT    D  
Sbjct: 459 NGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIR 518

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           V + LI +Y +C   E A  +F      ++  WN MI+  S N     A   F  +   E
Sbjct: 519 VQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHI---E 575

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
             P + +   +LS+C +L     G+Q+H  + +     + FV +AL +MY  CG +  A 
Sbjct: 576 FEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAF 635

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           Q F     ++   WN MI  +  +  G +A+ L+ +M   G +P   TF+++L+ACSHSG
Sbjct: 636 QIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSG 695

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           LV+ G+  +++M     VE   +H+ CM+D LGRAG   EA   I +MP + +P +W  L
Sbjct: 696 LVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGAL 755

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           LS+C  H ++++ +  AE LF L+P+N   Y  L+N+Y + GRW D   +R ++ +  + 
Sbjct: 756 LSACSYHGDLKMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAVELRRIIQDKGLK 815

Query: 741 KDPAYSL 747
           K  AYSL
Sbjct: 816 KPAAYSL 822



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 178/611 (29%), Positives = 297/611 (48%), Gaps = 59/611 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            ++L+A  ++ D   ++ LFDE+  R+V+ WN +I+A V N     A++++ ++  EG  
Sbjct: 11  TSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGVG 70

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
               TL  V  AS+ + ++  GR  HG+  K GL  + ++ NAL+ +YAKCG    +  V
Sbjct: 71  LDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECV 130

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  M   + +++ +MM G A  +   ++L  F+ M   +   D+VSL+          C 
Sbjct: 131 FGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLT----------CA 180

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH--LSNSLLDMYAKNGDMDSAEVIF 295
           V +               GQ +H   IKLG++   H    NSL+ +Y++  D+ +AE++F
Sbjct: 181 VSASAL------LGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILF 234

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVAC-----V 349
             +  + +VSWN M+ G     +  +A +LL  M+  G  +PD VT + ++  C     +
Sbjct: 235 KEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLL 294

Query: 350 RSG------------------------------DIKTGREMFDSMPSPSVSSWNAMLSSY 379
           R G                              D+K    +F ++P   + SWNAM+S Y
Sbjct: 295 REGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGY 354

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           SQ+ + +EA  LFR++     +   +TL  IL SC +   L+ G+ +H   LK     + 
Sbjct: 355 SQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNP 414

Query: 440 YVASGLIGIYSKCQRNELAERVFHRI-PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
              + L+ +Y  C        +   +    DIVCWN+++AG + N    EA   F  MRQ
Sbjct: 415 LAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQ 474

Query: 499 N-EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           + ++     +   V+S+C  L   F G  +H    K    +DI V +ALI MY +CG+I 
Sbjct: 475 DPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIE 534

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            AR  F     +N  +WN MI  ++QN  G  A+ L+  +     +P++IT V IL+AC+
Sbjct: 535 NARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHI---EFEPNEITIVGILSACT 591

Query: 618 HSGLVDVGVEI 628
             G++  G +I
Sbjct: 592 QLGVLRHGKQI 602



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 222/511 (43%), Gaps = 58/511 (11%)

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
           +G  A L  S SLL  Y++  D  S+  +F  +  R V+ WN MI    +      A+ L
Sbjct: 1   MGALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNL 60

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------------------------- 360
              +   G   D  T + ++ A    G++  GR +                         
Sbjct: 61  FVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAK 120

Query: 361 ----------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
                     F  M    + SWN+M+   + +   K+++  F++M +   + D  +L   
Sbjct: 121 CGELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCA 180

Query: 411 LSSCAAMGILESGKQVHAASLKTA----SHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
           +S+ A +G L  G+ +H   +K      SH  N   + LI +YS+C+  + AE +F  + 
Sbjct: 181 VSASALLGELSFGQVIHGWGIKLGYKDISH--NSFENSLISLYSQCRDIQAAEILFKEMK 238

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR-QNEMYPTQFSFATVLSSCAKLSSSFQGR 525
             DIV WN+M+ GL+LN    EAF    +M+    + P   +   ++  CA+L    +GR
Sbjct: 239 YKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGR 298

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
            VH    +     D  V ++LI+MY KC D+  A   F  +  ++ V+WN MI GY+QNG
Sbjct: 299 AVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNG 358

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG-------V 638
           +  EA  L++ ++ S  +    T +AIL +C  S  +  G E  +  QL  G       V
Sbjct: 359 HSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFG-ESIHCWQLKLGFANNPLAV 417

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
             ++  Y   I+C    G       L+  +    D V W  +++ C  + +   A +A  
Sbjct: 418 NSLMLMY---INC----GDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAF- 469

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRA 729
            L R DP        L N+ S+ G  + L A
Sbjct: 470 NLMRQDPDVCHDSVALFNVISACGNLELLFA 500



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 161/400 (40%), Gaps = 88/400 (22%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG  LH   L+  +  D  + N LI +Y +C    +A+ +F    ++++ SWN ++SA  
Sbjct: 500 AGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFS 559

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++ D   A +LF  +                                   F P  IT+  
Sbjct: 560 QNKDGRRALELFCHIE----------------------------------FEPNEITIVG 585

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A T L  + HG++ HG VI+  L  N +V+ AL  +Y+ CG    A  +F+   E +
Sbjct: 586 ILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERS 645

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
              + +M+S         +A+E+F  M          +  S+L  C+  G  V   ++  
Sbjct: 646 VAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGL-VNEGLWYY 704

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S+     NV              EAD      ++DM  + G +                 
Sbjct: 705 SNMLELFNV--------------EADTEHHVCMVDMLGRAGRL----------------- 733

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----MF 361
                   G+ Y      E +++M +   +P+      +L AC   GD+K GRE    +F
Sbjct: 734 --------GEAY------EFIRQMPT---QPEPGVWGALLSACSYHGDLKMGREVAELLF 776

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           +  P  +V  + ++ + Y  +   K+A++L R +Q +G+K
Sbjct: 777 ELEPE-NVGYYISLSNMYVAAGRWKDAVELRRIIQDKGLK 815


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 213/712 (29%), Positives = 366/712 (51%), Gaps = 57/712 (8%)

Query: 72  FAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
           +A++LFDE P +++  +N L+    RN  + +AL ++  + + G     +TL+   K   
Sbjct: 56  YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
            L D   GR+ H   +K G  +++ V  +L+ +Y K    +    +F+EM   N V++T+
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           ++SG A+     E + +   M  + V+ +  + ++VLG  A E   +E            
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESI-IEG----------- 223

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G QVH + +K GFE    + N+L+ MY K+  +  AE +F ++  R  V+WN+MI 
Sbjct: 224 ----GVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIG 279

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGDIKTGREM 360
           GY       +  ++  RM+  G +         L  C           +  G +K G E 
Sbjct: 280 GYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEF 339

Query: 361 FDSMPSP-------------------------SVSSWNAMLSSYSQSENHKEAIKLFREM 395
              + +                          +V +W AM+  + Q+ N+K+A+ LF +M
Sbjct: 340 AQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQM 399

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
              GV+P+  T + +L+   +  +     Q+HA  +K        VA+ L+  Y K    
Sbjct: 400 SREGVRPNHFTYSTVLAGKPSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNV 455

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
             + RVF+ IP  DIV W++M+ GL+      +A   F Q+ +  + P +++F++V+++C
Sbjct: 456 VESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINAC 515

Query: 516 AKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           +  +++ + G+Q+HA   K G  N + V SAL+ MY K G+I  A + F     ++ V+W
Sbjct: 516 SSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSW 575

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI GY Q+G   +A+ +++ M   G+  DD+TF+ +LTAC+H+GLV+ G + FN M  
Sbjct: 576 NSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK 635

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           D+ ++   +HY+CM+D   RAG F +A  +I+ MP    P IW  LL++CR+H N+ L K
Sbjct: 636 DYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGK 695

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AAE+L  L P ++  Y LL+NI++  G W++   VR+LM E  + K+   S
Sbjct: 696 LAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCS 747



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/585 (26%), Positives = 273/585 (46%), Gaps = 81/585 (13%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            V G+ +H   L++G  +D  +   L+++Y                              
Sbjct: 120 QVVGRQVHCQSLKSGFLEDVSVGTSLVDMY------------------------------ 149

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             K++D E    +FDEM  +NVVSW +L+S   RNGL ++ + + N+M  EG  P   T 
Sbjct: 150 -MKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTF 208

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A+V  A      +E G + H +++K G +   +V NAL+ +Y K      A  VF+ M  
Sbjct: 209 ATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVV 268

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + VT+  M+ G A     +E  +MF  M    V +      + L +C++          
Sbjct: 269 RDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQ---------- 318

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL-PERS 302
            Q +  F++     Q+HC  +K G+E    +  +L+  Y+K   +D A  +FS      +
Sbjct: 319 -QRELNFTK-----QLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHN 372

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT---------------------- 340
           VV+W  MI G+ Q   + KA++L  +M   G  P+  T                      
Sbjct: 373 VVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIK 432

Query: 341 ---------SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                    +  +L A V++G++     +F S+P+  + +W+AML+  +Q+ + ++A+++
Sbjct: 433 AYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEV 492

Query: 392 FREMQFRGVKPDRTTLAIILSSC-AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           F ++   GVKP+  T + ++++C ++   +E GKQ+HA ++K+       V+S L+ +YS
Sbjct: 493 FIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYS 552

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           K    E AE+VF R  E DIV WNSMI G   +    +A   F+ M+   +     +F  
Sbjct: 553 KKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIG 612

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCG 554
           VL++C       +G +    + KD +++      S ++++Y + G
Sbjct: 613 VLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAG 657



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 151/576 (26%), Positives = 265/576 (46%), Gaps = 63/576 (10%)

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
           ++A  +F+E    +   +  ++   ++ +   EAL +F+ +    + +D ++LS  L V 
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKV- 113

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
               CGV  D            V G+QVHC ++K GF  D+ +  SL+DMY K  D +  
Sbjct: 114 ----CGVLFD-----------QVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDG 158

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--- 348
             IF  +  ++VVSW  +++GY +   + + I L+ +M+  G  P+  T   +L A    
Sbjct: 159 RGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADE 218

Query: 349 --------VRSGDIKTGRE------------------------MFDSMPSPSVSSWNAML 376
                   V +  +K G E                        +FDSM      +WN M+
Sbjct: 219 SIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMI 278

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
             Y+    + E  ++F  M+  GVK  RT     L  C+    L   KQ+H   +K    
Sbjct: 279 GGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYE 338

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
               + + L+  YSKC   + A ++F       ++V W +MI G   N+ + +A   F Q
Sbjct: 339 FAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQ 398

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M +  + P  F+++TVL+   K SS     Q+HAQI K  Y     V +AL++ Y K G+
Sbjct: 399 MSREGVRPNHFTYSTVLA--GKPSSLLS--QLHAQIIKAYYEKVPSVATALLDAYVKTGN 454

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  + + F  +  K+ V W+ M+ G AQ    ++A+ ++  ++  GVKP++ TF +++ A
Sbjct: 455 VVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINA 514

Query: 616 CSHS-GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           CS S   V+ G +I ++  +  G    L   + ++    + G+   AE +      + D 
Sbjct: 515 CSSSAATVEHGKQI-HATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDI 572

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
           V W  +++    H +   AK+A  E+F++      P
Sbjct: 573 VSWNSMITGYGQHGD---AKKAL-EVFQIMQNQGLP 604



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 195/380 (51%), Gaps = 32/380 (8%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEM-PERNVVSWNNLISALVRNGLEEKALSVYNK 110
           +DI +   +  ++C S D   A+KLF       NVV+W  +I   V+N   +KA+ ++ +
Sbjct: 341 QDIRTALMVTYSKCSSVDE--AFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQ 398

Query: 111 MSNEGFVPTHITLASVFKAS-TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           MS EG  P H T ++V     ++LL      + H  +IK   +K   VA ALL  Y K G
Sbjct: 399 MSREGVRPNHFTYSTVLAGKPSSLLS-----QLHAQIIKAYYEKVPSVATALLDAYVKTG 453

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
               +  VF  +   + V ++AM++GLA+T    +A+E+F  ++++ V  +  + SSV+ 
Sbjct: 454 NVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVIN 513

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            C+     VE               HG+Q+H   +K G    L +S++LL MY+K G+++
Sbjct: 514 ACSSSAATVE---------------HGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIE 558

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
           SAE +F+   ER +VSWN MI GYGQ   + KA+E+ Q M++ G   D+VT I +L AC 
Sbjct: 559 SAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACT 618

Query: 350 RSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
            +G ++ G + F+ M            ++ M+  YS++    +A+ +   M F       
Sbjct: 619 HAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPF---PASP 675

Query: 405 TTLAIILSSCAAMGILESGK 424
           T    +L++C     LE GK
Sbjct: 676 TIWRTLLAACRVHRNLELGK 695



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/514 (22%), Positives = 223/514 (43%), Gaps = 92/514 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G  +HA I++NG    TF+CN LI +Y                                
Sbjct: 223 GGVQVHAMIVKNGFEFTTFVCNALICMY-------------------------------L 251

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           KS+ +  A  +FD M  R+ V+WN +I      G   +   ++++M   G   +     +
Sbjct: 252 KSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCT 311

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM-SEP 184
             K  +   ++   ++ H  V+K G +    +  AL+  Y+KC     A  +F    +  
Sbjct: 312 ALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAH 371

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N VT+TAM+ G  + +   +A+++F  M R+ V  +  + S+VL        G  S + +
Sbjct: 372 NVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA-------GKPSSLLS 424

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           Q             +H   IK  +E    ++ +LLD Y K G++  +  +F ++P + +V
Sbjct: 425 Q-------------LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIV 471

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------------- 351
           +W+ M+ G  Q   S KA+E+  ++   G +P+E T  +++ AC  S             
Sbjct: 472 AWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHAT 531

Query: 352 -----------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                  G+I++  ++F       + SWN+M++ Y Q  + K+A
Sbjct: 532 AVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKA 591

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLI 446
           +++F+ MQ +G+  D  T   +L++C   G++E G++     +K   HID      S ++
Sbjct: 592 LEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKD-YHIDKKXEHYSCMV 650

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
            +YS+    + A  + + +P       W +++A 
Sbjct: 651 DLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAA 684



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 2/228 (0%)

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
           R   A ++F   P  DI  +N ++   S N+ D EA   FK +  + +     + +  L 
Sbjct: 53  RPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALK 112

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
            C  L     GRQVH Q  K G++ D+ VG++L++MY K  D    R  FD M  KN V+
Sbjct: 113 VCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVS 172

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W  ++ GYA+NG  DE + L   M   GV P+  TF  +L A +   +++ GV++ ++M 
Sbjct: 173 WTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQV-HAMI 231

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           + +G E        +I    ++    +AE + D M  +D  V W +++
Sbjct: 232 VKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDS-VTWNIMI 278



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 4/163 (2%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +A+L+   K  ++E A K+F    ER++VSWN++I+   ++G  +KAL V+  M N+G  
Sbjct: 545 SALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLP 604

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHAVP 176
              +T   V  A T    VE G +   ++IK   +DK     + ++ LY++ G    A+ 
Sbjct: 605 LDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMD 664

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           +   M  P   T   +   L    RV   LE+ +L   K VS+
Sbjct: 665 IINGMPFPASPT---IWRTLLAACRVHRNLELGKLAAEKLVSL 704


>gi|255570402|ref|XP_002526160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534537|gb|EEF36236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 762

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 227/698 (32%), Positives = 351/698 (50%), Gaps = 92/698 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+H ++++ G    +F    LI++Y+K N     + +FD     D  SW ++++   K
Sbjct: 37  GRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDCRRVFDGGVSLDTVSWTSLIAGYVK 96

Query: 67  S--------------------DDLEF---------------AYKLFDEMPERNVVSWNNL 91
           +                    D + F               A  LF +MP  NVV+WN +
Sbjct: 97  AGLPEEALEVFEQMKKVGREPDQVAFVTVINAYVALGRLDDALGLFFQMPNPNVVAWNVM 156

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           IS   + G E K++ ++  M   G   T  TL SV  A  +L D++ G   H   IK GL
Sbjct: 157 ISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGL 216

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D N+YV ++L+++YAKC   + A  VF+ + E N V + AM+ G A+     E +E+   
Sbjct: 217 DSNVYVGSSLINMYAKCKELEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSN 276

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M       D  + +S+L  CA   C                   G+Q+H + IK  F ++
Sbjct: 277 MKSCGFHPDEFTYTSILSACA---C-------------LEHVEGGRQLHSIIIKNKFASN 320

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L + N+L+DMYAK+G ++ A   F  +  R  VSWN +I GY Q+    +A  + Q+M  
Sbjct: 321 LFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHL 380

Query: 332 CGFEPDEVTSINMLVAC-----------------------------------VRSGDIKT 356
            G  PDEV+  ++L AC                                    + GD+ +
Sbjct: 381 VGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMYAKCGDVGS 440

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            +++  SMP  SV S NA+++ Y+   N +EAI LF +MQ  G+ P   T A +L  C  
Sbjct: 441 AQKILKSMPEHSVVSINALIAGYAPV-NLEEAIILFEKMQAEGLNPSEITFASLLDGCGG 499

Query: 417 MGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAERVFHRI--PELDIVCW 473
              L  G Q+H   LK    + D+++   L+G+Y K  R   A  +F     P+  I+ W
Sbjct: 500 PEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSNPKSTIL-W 558

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
            +MI+GL+ N+   EA  F+++MR     P Q +F +VL +CA LSS   GR++H+ I +
Sbjct: 559 TAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACAVLSSIGDGREIHSLIFR 618

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN-TVTWNEMIHGYAQNGYGDEAVR 592
            G   D    SALI+MY KCGD+  + Q F+ MH KN  ++WN MI G+A+NGY + A+R
Sbjct: 619 TGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGFAKNGYAENALR 678

Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           ++ +M  + V PDD+TF+ +LTACSH+G V  G +IF+
Sbjct: 679 IFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQIFD 716



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 199/671 (29%), Positives = 321/671 (47%), Gaps = 103/671 (15%)

Query: 105 LSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL 164
           L  Y  + + G  P   T A V      L  VE GR  H  V+K+G + + +   AL+ +
Sbjct: 3   LKCYGLLWSHGMWPNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDM 62

Query: 165 YAK--------------------------CGWTKHAVP-----VFEEMS----EPNEVTF 189
           YAK                           G+ K  +P     VFE+M     EP++V F
Sbjct: 63  YAKNNRMSDCRRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAF 122

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS----------SVLGVCAREGCGVE 239
             +++      R+ +AL +F  M    V   +V +S          S+   C     G++
Sbjct: 123 VTVINAYVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIK 182

Query: 240 SD----------VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
           S           + + +D  F     G  VH   IK G ++++++ +SL++MYAK  +++
Sbjct: 183 STRSTLGSVLSAIASLTDLDF-----GLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELE 237

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC- 348
           +A+ +F  + ER+VV WN M+ GY Q   + + IELL  MKSCGF PDE T  ++L AC 
Sbjct: 238 AAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACA 297

Query: 349 ----------------------------------VRSGDIKTGREMFDSMPSPSVSSWNA 374
                                              +SG ++  R+ F+ M S    SWNA
Sbjct: 298 CLEHVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNA 357

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           ++  Y Q E+  EA  +F++M   G+ PD  +LA ILS+CA +   E GK +H  S+K+ 
Sbjct: 358 IIVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSG 417

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
                Y  S LI +Y+KC     A+++   +PE  +V  N++IAG +  +L+ EA + F+
Sbjct: 418 LETSLYAGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALIAGYAPVNLE-EAIILFE 476

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY-VNDIFVGSALIEMYCKC 553
           +M+   + P++ +FA++L  C        G Q+H  I K G   +D F+G +L+ MY K 
Sbjct: 477 KMQAEGLNPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKS 536

Query: 554 GDIYGARQFF-DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
                AR  F +  + K+T+ W  MI G AQN   DEA++ Y++M +    PD  TFV++
Sbjct: 537 LRKTDARILFSEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSV 596

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPC 670
           L AC+    +  G EI +S+    G++  LD  TC  +ID   + G    +  + ++M  
Sbjct: 597 LRACAVLSSIGDGREI-HSLIFRTGLD--LDESTCSALIDMYAKCGDVRSSMQVFEDMHS 653

Query: 671 KDDPVIWEVLL 681
           K+D + W  ++
Sbjct: 654 KNDVISWNSMI 664



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 190/393 (48%), Gaps = 52/393 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   +++GL    +  + LI++Y+KC +  SAQ                       
Sbjct: 406 GKPIHCLSVKSGLETSLYAGSSLIDMYAKCGDVGSAQ----------------------- 442

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+   MPE +VVS N LI+      LEE A+ ++ KM  EG  P+ IT AS+
Sbjct: 443 --------KILKSMPEHSVVSINALIAGYAPVNLEE-AIILFEKMQAEGLNPSEITFASL 493

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEP- 184
                    +  G + H L++K GL   + ++  +LL +Y K      A  +F E S P 
Sbjct: 494 LDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSNPK 553

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + + +TAM+SGLA+ +   EAL+ ++ M       D  +  SVL  CA            
Sbjct: 554 STILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACA------------ 601

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-V 303
                 S    G+++H L  + G + D    ++L+DMYAK GD+ S+  +F ++  ++ V
Sbjct: 602 ----VLSSIGDGREIHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDV 657

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           +SWN MI G+ +   +  A+ +   MK     PD+VT + +L AC  +G +  GR++FD 
Sbjct: 658 ISWNSMIVGFAKNGYAENALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQIFDM 717

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
            PS  V++   ++     ++ + + +++FR ++
Sbjct: 718 KPS-FVTAPACLVREEVLTKAYAKMVEIFRWIE 749


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 217/717 (30%), Positives = 368/717 (51%), Gaps = 96/717 (13%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T + +F+  +    +  G++ H  +I       ++V N L+ +Y KC     A  VF+ M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + + V++ AM+ G A    +  A ++F  M      +  V L        R G   +  
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGV--VELFDFR--MGRMGTVFDRT 159

Query: 242 VFA---QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK----NGDM------ 288
            FA   +S +    +  G Q+H L +K+GF+ D+   ++LLDMYAK    N D+      
Sbjct: 160 TFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLEL 219

Query: 289 --------------------------------------------DSAEVIFSNLPERSVV 304
                                                       D +  +F++LP  ++ 
Sbjct: 220 FKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQ 279

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-VRSGDIKT----GRE 359
           S+N +I GY +  +  +A+ + + ++  G   DEV+      AC V  GD++     G  
Sbjct: 280 SYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLS 339

Query: 360 M------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
           M                              F+ M S    SWNA+++++ Q+ N ++ +
Sbjct: 340 MKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTL 399

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF  M   G++PD  T   +L +CA    L  G ++H   +K+   +D++V   LI +Y
Sbjct: 400 SLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMY 459

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           SKC   E AE++  R+ E  +V WN++I+G SL     EA   F +M +  + P  F++A
Sbjct: 460 SKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYA 519

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           T+L +CA L +   G+Q+HAQI K    +D ++ S L++MY KCG++   +  F+    +
Sbjct: 520 TILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNR 579

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + VTWN M+ GYAQ+G G+EA+++++ M    VKP+  TF+A+L AC H GLV+ G+  F
Sbjct: 580 DFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYF 639

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           +SM  ++G++P L+HY+C++D +GR+G   +A  LI+ MP + D VIW  LLS C++H N
Sbjct: 640 HSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGN 699

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           V +A++AA  + +L+P++SA Y LL+NIY++ G W+++  +R++M  N + K+P  S
Sbjct: 700 VEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCS 756



 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 184/677 (27%), Positives = 298/677 (44%), Gaps = 130/677 (19%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           +KA   GK  HA ++        F+ N LI++Y KC++   A  +FD MP +D  SWNA+
Sbjct: 55  RKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAM 114

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN-KMSNEGFVPT 119
           L       D+  A KLFD MP                 G     + +++ +M   G V  
Sbjct: 115 LFGYAGRGDIGVAQKLFDAMP-----------------GTGCGVVELFDFRMGRMGTVFD 157

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT----KHAV 175
             T A V K+ ++L D   G + HGL +K+G D ++   +ALL +YAKC       +  +
Sbjct: 158 RTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGL 217

Query: 176 PVFEEM------------------------------------------------SEPNE- 186
            +F+EM                                                S PN  
Sbjct: 218 ELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHN 277

Query: 187 -VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             ++ A++ G A++D+ +EAL MFRL+ +  + +D VSLS     CA             
Sbjct: 278 LQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAV------------ 325

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                  ++ G QVH L++K   ++++ ++N++LDMY K G +  A ++F  +  R  VS
Sbjct: 326 ----IKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVS 381

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           WN +IA + Q     K + L   M   G EPDE T  ++L AC                 
Sbjct: 382 WNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRII 441

Query: 350 -------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G ++   ++ D +   +V SWNA++S +S  +  +EA K
Sbjct: 442 KSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQK 501

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            F +M   GV PD  T A IL +CA +  +E GKQ+HA  +K     D Y++S L+ +YS
Sbjct: 502 TFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYS 561

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   +  + +F + P  D V WN+M+ G + + L  EA   F+ M+   + P   +F  
Sbjct: 562 KCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLA 621

Query: 511 VLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD-MMHG 568
           VL +C  +    +G    H+ +   G    +   S ++++  + G +  A +  + M   
Sbjct: 622 VLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFE 681

Query: 569 KNTVTWNEM-----IHG 580
            + V W  +     IHG
Sbjct: 682 ADAVIWRTLLSXCKIHG 698



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 189/380 (49%), Gaps = 24/380 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NAIL    K   L  A  +F+EM  R+ VSWN +I+A  +NG EEK LS++  M   G  
Sbjct: 352 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGME 411

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T  SV KA      +  G   H  +IK  +  + +V  AL+ +Y+KCG  + A  +
Sbjct: 412 PDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKL 471

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
            + ++E   V++ A++SG +   +  EA + F  M+   V  D+ + +++L  CA     
Sbjct: 472 HDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCA----- 526

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                     N  +  + G+Q+H   IK   ++D ++S++L+DMY+K G+M   ++IF  
Sbjct: 527 ----------NLVTVEL-GKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEK 575

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
            P R  V+WN M+ GY Q     +A+++ + M+    +P+  T + +L AC   G ++ G
Sbjct: 576 APNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKG 635

Query: 358 REMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
              F SM S     P +  ++ ++    +S    +A++L   M F   + D      +LS
Sbjct: 636 LHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPF---EADAVIWRTLLS 692

Query: 413 SCAAMGILESGKQVHAASLK 432
            C   G +E  ++   + L+
Sbjct: 693 XCKIHGNVEVAEKAAYSILQ 712



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 149/369 (40%), Gaps = 85/369 (23%)

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
           ++     + T + I   C+    L  GKQ HA  + T      +V + LI +Y KC    
Sbjct: 35  YQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLG 94

Query: 457 LAERVFHRIPELDIVCWNSMIAGLS-LNSLDIEAFMF---------------FKQMRQNE 500
            A +VF  +P+ D V WN+M+ G +    + +   +F               F+  R   
Sbjct: 95  FAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGT 154

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC----GDI 556
           ++  + +FA VL SC+ L     G Q+H    K G+  D+  GSAL++MY KC     D+
Sbjct: 155 VF-DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDL 213

Query: 557 YGARQFFDMM----------HG-------------------------------------- 568
            G  + F  M          HG                                      
Sbjct: 214 RGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSL 273

Query: 569 --KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS-----HSGL 621
              N  ++N +I GYA++  G EA+ +++ +  SG+  D+++      AC+       GL
Sbjct: 274 PNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGL 333

Query: 622 VDVGVEIFNSMQLDHGV-EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
              G+ + +  Q +  V   ILD Y       G+ G   EA ++ +EM  + D V W  +
Sbjct: 334 QVHGLSMKSLCQSNICVANAILDMY-------GKCGALVEACLVFEEMVSR-DAVSWNAI 385

Query: 681 LSSCRLHAN 689
           +++   + N
Sbjct: 386 IAAHEQNGN 394


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 204/643 (31%), Positives = 327/643 (50%), Gaps = 124/643 (19%)

Query: 212 MIRKAVS----IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           ++RK V     +DS   + +L  C +     E+ +                VH   IK  
Sbjct: 6   LVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARL----------------VHARIIKTQ 49

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNL----------------------------- 298
           F +++ + N L+D+Y K G ++ A  +F ++                             
Sbjct: 50  FSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFK 109

Query: 299 --PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
             PER   SWN M++G+ Q+ +  +A+  +  M S  F  +E +  + L AC    D+  
Sbjct: 110 CMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSI 169

Query: 357 GREM-----------------------------------FDSMPSPSVSSWNAMLSSYSQ 381
           G ++                                   FD M   ++ SWN++++ Y Q
Sbjct: 170 GVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQ 229

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +    +A+++F  M   G++PD  TLA + S+CA++  +  G Q+HA  +K   + ++ V
Sbjct: 230 NGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLV 289

Query: 442 -ASGLIGIYSKCQRNELAERVFHRIP-------------------------------ELD 469
             + L+ +Y+KC+R   A  VF R+P                               E +
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERN 349

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V WN++IAG + N  + EA   F  +++  ++PT ++F  +L++CA L+    GRQ H 
Sbjct: 350 VVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHT 409

Query: 530 QIEKDGYV------NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
            I K G+       +DIFVG++LI+MY KCG +   R  F+ M  ++ V+WN MI GYAQ
Sbjct: 410 HILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQ 469

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
           NGYG EA+ ++++M+ SG +PD +T + +L+ACSH+GLV+ G   F SM ++HG+ P+ D
Sbjct: 470 NGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKD 529

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
           HYTCM+D LGRAG   EA  LI  MP + D V+W  LL++C++H N+ L K  AE L  +
Sbjct: 530 HYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEI 589

Query: 704 DPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           DP NS PY LL+N+Y+ LGRW D+  VR+ M +  ++K P  S
Sbjct: 590 DPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCS 632



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 254/539 (47%), Gaps = 63/539 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+    +L+HA I++     + F+ NRL+++Y KC     A+ +FD M  ++ +SWNA+L
Sbjct: 33  KSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVL 92

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
            A  K   L+ A  LF  MPER+  SWN ++S   +    E+AL     M +E FV    
Sbjct: 93  GALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEY 152

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           +  S   A   L+D+  G + HGL+ K     ++Y+ +AL+ +Y+KC     A   F++M
Sbjct: 153 SFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDM 212

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA-----REGC 236
              N V++ ++++   +     +ALE+F  M+   +  D ++L+SV   CA     REG 
Sbjct: 213 DVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGL 272

Query: 237 GVESDVFA----QSDNKFSRNVHGQQVHCLTI---KLGFE----ADLHLSNSLLDMYAKN 285
            + + V      ++D      +      C  +   +L F+     D+    S++  YAK 
Sbjct: 273 QIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKA 332

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
             + +A ++FSN+ ER+VVSWN +IAGY Q  ++ +A+ L   +K     P   T  N+L
Sbjct: 333 SSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLL 392

Query: 346 VACVRSGDIKTGRE-----------------------------------------MFDSM 364
            AC    D+K GR+                                         +F+ M
Sbjct: 393 NACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERM 452

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
                 SWNAM+  Y+Q+    EA+++FREM   G +PD  T+  +LS+C+  G++E G+
Sbjct: 453 LERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGR 512

Query: 425 ---QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
              Q            D+Y    ++ +  +    + A  +   +P E D V W S++A 
Sbjct: 513 CYFQSMTIEHGLVPVKDHYTC--MVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAA 569


>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 989

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 227/777 (29%), Positives = 393/777 (50%), Gaps = 85/777 (10%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG  LHA  L+ G+  D  L   LI LY+                               
Sbjct: 259 AGGSLHAFALKCGVLGDESLAPALISLYAAL----------------------------- 289

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
             DDL  +  LFD    +++VS+N++ISA +++G  +++  V+ +M   G  P  +T+ S
Sbjct: 290 --DDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLGPNLVTVIS 347

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V    +    V  G   HG+VIK GL + I V +AL+S+Y+K G    A  +F+  +E N
Sbjct: 348 VLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEKN 407

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            + + +++SG    +    AL+ F  M  + V+ D+ ++  V+      GC    D+   
Sbjct: 408 NLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVI-----YGCRHIKDLRM- 461

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                      + +H   ++  FE +  + N+LL MY   G++ S+  +F  +  R ++S
Sbjct: 462 ----------AKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLIS 511

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----------------CV 349
           WN +I+GY +      +++L  +M+  G + D VT I ++ +                 V
Sbjct: 512 WNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAV 571

Query: 350 RSG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
           +SG                    ++  + +FD++ S +  S+N +++ Y ++   +E + 
Sbjct: 572 KSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILP 631

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LFR+M     +P+  T+  +L  C      + GK VH  +++  S ++    +  I +YS
Sbjct: 632 LFRQMVKNEQEPNHITVLNLLPVCQNH---QQGKSVHCYAIRNFSTLETSFFTSAICMYS 688

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           +    + + ++F+ + E +I+ WN++++      L   AF FF+QM    M P + +  +
Sbjct: 689 RFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVTMMS 748

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           ++S+CA+L +S  G  V A I + G+   + V +ALI+M+ +CG +  AR+ FD    K+
Sbjct: 749 LVSACAQLGNSDLGECVTALILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVKD 808

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           +VTW+ MI+ Y+ +G  + A+ ++  MI SGVKPDDITFV IL+ACSHSG V+    +F 
Sbjct: 809 SVTWSAMINSYSMHGDCESALAIFSMMIDSGVKPDDITFVIILSACSHSGFVEQARALFK 868

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           S+Q+DHG+ P ++HY CM+D LGR+GH  EA  ++  M  +    + E LL +CR H N 
Sbjct: 869 SLQIDHGITPRMEHYACMVDLLGRSGHLDEAYDVVRSMSFRPSESLLESLLGACRFHGNS 928

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           ++ +     L      N   Y +L+NIY+S+G+W+D   +R  M    + KD   SL
Sbjct: 929 KIGEAVGNLLIDSQHGNPRSYVMLSNIYASVGKWNDYEWLRVDMEAKGLRKDAGVSL 985



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 172/718 (23%), Positives = 323/718 (44%), Gaps = 87/718 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +LR G   +  +   L+++Y+K     +++ +FD M  KD+ SWNA++S    
Sbjct: 159 GREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQKDLISWNAMIS---- 214

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  Y L                     NG   +A+    +M  +G      TL  +
Sbjct: 215 ------GYSL---------------------NGSLREAVEATQEMQQDGMRANASTLVCI 247

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  A  D + G   H   +K G+  +  +A AL+SLYA       +  +F+     + 
Sbjct: 248 AGACGAAGDSDAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDL 307

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +M+S   +  +  E+ ++FR M    +  + V++ SVL  C        SD F  +
Sbjct: 308 VSYNSMISAYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTC--------SDFFGVN 359

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G  VH + IK G    + + ++L+ MY+K G++DSA+ +F +  E++ + W
Sbjct: 360 --------LGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLW 411

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VR 350
           N +I+GY    +   A++   +M+     PD  T I ++  C                VR
Sbjct: 412 NSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVR 471

Query: 351 S-------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
           +                   G++ +  ++F  M    + SWN ++S Y++  + + ++KL
Sbjct: 472 NRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKL 531

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +M+  G++ D  TL  ++SS +       G+ +H+ ++K+  ++D  + + LI +YS 
Sbjct: 532 FFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNMDISLTNTLITMYSN 591

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E  +R+F  +   + V +N ++ G   N+L  E    F+QM +NE  P   +   +
Sbjct: 592 CGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLNL 651

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L  C       QG+ VH    ++    +    ++ I MY +  ++  + + F+ +  +N 
Sbjct: 652 LPVCQNHQ---QGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLFNSVGERNI 708

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           + WN ++    Q    D A   ++ M    +KPD++T +++++AC+  G  D+G E   +
Sbjct: 709 IVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSACAQLGNSDLG-ECVTA 767

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           + L  G    L     +ID   R G    A  L D    KD  V W  +++S  +H +
Sbjct: 768 LILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVKDS-VTWSAMINSYSMHGD 824



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 141/571 (24%), Positives = 267/571 (46%), Gaps = 55/571 (9%)

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
            V S N  +     +G   + L +Y  +    F   + T   V KA  A+  +  GR  H
Sbjct: 106 TVYSLNLAVRCFSDHGFHRELLDLYRTLCT--FGSDNFTFPPVIKACAAVSCLPLGREMH 163

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
             V++ G + N+ V  ALL +YAK GW   +  VF+ M + + +++ AM+SG +    + 
Sbjct: 164 CRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQKDLISWNAMISGYSLNGSLR 223

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           EA+E  + M +  +  ++ +L  + G C   G   +SD              G  +H   
Sbjct: 224 EAVEATQEMQQDGMRANASTLVCIAGACGAAG---DSDA-------------GGSLHAFA 267

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
           +K G   D  L+ +L+ +YA   D+ S+ V+F     + +VS+N MI+ Y Q  +  ++ 
Sbjct: 268 LKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKESF 327

Query: 324 ELLQRMKSCGFEPDEVTSINMLVAC----------------------------------- 348
           ++ ++M   G  P+ VT I++L  C                                   
Sbjct: 328 DVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMY 387

Query: 349 VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
            + G++ + + +FDS    +   WN+++S Y  +     A+  F +MQ   V PD TT+ 
Sbjct: 388 SKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVI 447

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
            ++  C  +  L   K +HA +++    ++  V + L+ +Y  C     + ++F ++   
Sbjct: 448 KVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVR 507

Query: 469 DIVCWNSMIAGLS-LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            ++ WN++I+G + +  L+    +FF QMRQ  +     +   ++SS +    +  G  +
Sbjct: 508 MLISWNTIISGYAEIRDLEASVKLFF-QMRQEGLQFDVVTLIGLISSISVAEDTTVGESL 566

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H+   K G   DI + + LI MY  CG +   ++ FD +  +NTV++N ++ GY +N   
Sbjct: 567 HSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLS 626

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           +E + L++ M+ +  +P+ IT + +L  C +
Sbjct: 627 EEILPLFRQMVKNEQEPNHITVLNLLPVCQN 657



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 158/316 (50%), Gaps = 4/316 (1%)

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           P+V S N  +  +S    H+E + L+R +   G   D  T   ++ +CAA+  L  G+++
Sbjct: 105 PTVYSLNLAVRCFSDHGFHRELLDLYRTLCTFG--SDNFTFPPVIKACAAVSCLPLGREM 162

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H   L+T    +  V + L+ +Y+K      +  VF  + + D++ WN+MI+G SLN   
Sbjct: 163 HCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQKDLISWNAMISGYSLNGSL 222

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
            EA    ++M+Q+ M     +   +  +C     S  G  +HA   K G + D  +  AL
Sbjct: 223 REAVEATQEMQQDGMRANASTLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDESLAPAL 282

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           I +Y    D+  +R  FD+ H K+ V++N MI  Y Q+G   E+  +++ M  +G+ P+ 
Sbjct: 283 ISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLGPNL 342

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           +T +++L  CS    V++G  + + M +  G+   +   + ++    + G    A+ L D
Sbjct: 343 VTVISVLPTCSDFFGVNLGDSV-HGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFD 401

Query: 667 EMPCKDDPVIWEVLLS 682
               K++ ++W  ++S
Sbjct: 402 SCTEKNN-LLWNSIIS 416



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 35/234 (14%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H  GK +H + +RN    +T      I +YS+ NN   +  LF+ +  ++I  WNAILSA
Sbjct: 658 HQQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSA 717

Query: 64  --QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
             QCK                                 L + A   + +M      P  +
Sbjct: 718 CVQCK---------------------------------LADTAFDFFRQMHFLNMKPDEV 744

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ S+  A   L + + G     L+++ G    + V NAL+ ++++CG    A  +F+  
Sbjct: 745 TMMSLVSACAQLGNSDLGECVTALILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSS 804

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
              + VT++AM++  +       AL +F +MI   V  D ++   +L  C+  G
Sbjct: 805 VVKDSVTWSAMINSYSMHGDCESALAIFSMMIDSGVKPDDITFVIILSACSHSG 858


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 221/776 (28%), Positives = 374/776 (48%), Gaps = 83/776 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G L+HA  L  G F +T +   L+ +Y KC     AQ                       
Sbjct: 77  GILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQ----------------------- 113

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK-ALSVYNKMSNEGFVPTHITLAS 125
                    +F+EM E+NVV+WN ++      G   K A+ ++ +M  EG     IT  +
Sbjct: 114 --------SVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLN 165

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  +      +  G+  H  V +     +++V  AL++ Y KCG    A  VF+ M   +
Sbjct: 166 VLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRS 225

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             T+ +M+S  + ++R  EA  +F+ M ++    D V+  S+L  C      V  +    
Sbjct: 226 VGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDAC------VNPETLQ- 278

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                    HG+ V     +  FE DL +  +L+ MYA+    + A  +F  + + ++++
Sbjct: 279 ---------HGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLIT 329

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML-------------------- 345
           W+ +I  +       +A+   + M+  G  P+ VT I++L                    
Sbjct: 330 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 389

Query: 346 ------VACVRSGDIKT---------GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                    +R+  +            R +FD +  P++ SWN+M+  Y Q E H +A++
Sbjct: 390 EHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQ 449

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LFR MQ +G++PDR     IL +C       + K VH    ++       V + L+ +Y+
Sbjct: 450 LFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYA 509

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           K    ++AE +   + E  I  WN +I G +L+    EA   +++++   +   + +F +
Sbjct: 510 KAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFIS 569

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           VL++C   +S  +G+ +H+   + G  +D+ V +AL  MY KCG +  AR+ FD M  ++
Sbjct: 570 VLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRS 629

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+WN M+  YAQ+G  +E ++L + M   GVK + ITFV++L++CSH+GL+  G + F+
Sbjct: 630 AVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFH 689

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           S+  D G+E   +HY C++D LGRAG   EAE  I +MP +   V W  LL +CR+  ++
Sbjct: 690 SLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDL 749

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
              K AA +L  LDP NS+   +L+NIYS  G W +   +R  M+   + K P  S
Sbjct: 750 DRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGIS 805



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 175/674 (25%), Positives = 319/674 (47%), Gaps = 62/674 (9%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A   F ++  RNVVSWN +ISA       ++AL++++ M  EG  P  ITL +V  +  +
Sbjct: 11  AVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGS 70

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
             ++  G   H L ++ G  +N  VA ALL++Y KCG    A  VFEEM+E N VT+ AM
Sbjct: 71  FRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAM 130

Query: 193 MSGLAKTDRVVE-ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           +   +      + A+E+F  M+ + V  + ++  +VL         V+ D   +      
Sbjct: 131 LGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSV------VDPDALRK------ 178

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G+ +H    +     D+ ++ +L++ Y K G +  A  +F  +P RSV +WN MI+
Sbjct: 179 ----GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMIS 234

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------------- 358
            Y    +S +A  + QRM+  G   D VT +++L ACV    ++ G+             
Sbjct: 235 AYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFEL 294

Query: 359 ----------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                 ++F  M   ++ +W+A++++++   +  EA++ FR MQ
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQR 454
             G+ P+R T   +L+       LE   ++H   L T   +D+     + L+ +Y +C+ 
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHL--LITEHGLDDTTTMRNALVNVYGRCES 412

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A  VF ++   +++ WNSMI          +A   F+ M+Q  + P + +F T+L +
Sbjct: 413 PDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGA 472

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C   S     + VH  +E+ G      V ++L+ MY K G++  A      M  +    W
Sbjct: 473 CTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAW 532

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I+GYA +G   EA+  Y+ +    +  D +TF+++L AC+ S  +  G ++ +S  +
Sbjct: 533 NVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSNAV 591

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN----V 690
           + G++  +     + +   + G    A  + D MP +   V W  +L +   H      +
Sbjct: 592 ECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR-SAVSWNGMLQAYAQHGESEEVL 650

Query: 691 RLAKRAAEELFRLD 704
           +L ++  +E  +L+
Sbjct: 651 KLIRKMEQEGVKLN 664



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 164/579 (28%), Positives = 285/579 (49%), Gaps = 66/579 (11%)

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y++CG    AV  F ++   N V++  M+S  +      EAL +F  M+ + V+ ++++
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
           L +VL  C                  F     G  VH L+++ GF  +  ++ +LL+MY 
Sbjct: 61  LVAVLNSCG----------------SFRELRDGILVHALSLERGFFQNTLVATALLNMYG 104

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK-AIELLQRMKSCGFEPDEVTSI 342
           K G +  A+ +F  + E++VV+WN M+  Y  +    K A+EL  RM   G + + +T +
Sbjct: 105 KCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFL 164

Query: 343 NMLV---------------ACVRS--------------------GDIKTGREMFDSMPSP 367
           N+L                +CVR                     G +   R++FD MP  
Sbjct: 165 NVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCR 224

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           SV +WN+M+S+YS SE   EA  +F+ MQ  G + DR T   IL +C     L+ GK V 
Sbjct: 225 SVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVR 284

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
            +  +T+  +D +V + LI +Y++C+  E A +VF R+ + +++ W+++I   + +    
Sbjct: 285 ESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCG 344

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           EA  +F+ M+Q  + P + +F ++L+     S   +  ++H  I + G  +   + +AL+
Sbjct: 345 EALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALV 404

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
            +Y +C     AR  FD +   N ++WN MI  Y Q    D+A++L++ M   G++PD +
Sbjct: 405 NVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRV 464

Query: 608 TFVAILTAC---SHS---GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
            F+ IL AC   SH     LV   VE     +   G  P++   T +++   +AG    A
Sbjct: 465 NFMTILGACTIGSHGRTRKLVHQCVE-----ESGLGGSPLVQ--TSLVNMYAKAGELDVA 517

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
           E+++ EM  +     W VL++   LH   R A  A ++L
Sbjct: 518 EVILQEMD-EQQITAWNVLINGYALHGRSREALEAYQKL 555



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 190/394 (48%), Gaps = 12/394 (3%)

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           R G +      F  + + +V SWN M+S+YS  ++ +EA+ LF  M   GV P+  TL  
Sbjct: 4   RCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVA 63

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L+SC +   L  G  VHA SL+     +  VA+ L+ +Y KC     A+ VF  + E +
Sbjct: 64  VLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKN 123

Query: 470 IVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           +V WN+M+   SL     + A   F +M    +     +F  VL+S     +  +G+ +H
Sbjct: 124 VVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIH 183

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
           + + +  +  D+FV +AL+  Y KCG +  AR+ FD M  ++  TWN MI  Y+ +    
Sbjct: 184 SCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSG 243

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
           EA  +++ M   G + D +TF++IL AC +   +  G  +  S+  +   E  L   T +
Sbjct: 244 EAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESIS-ETSFELDLFVGTAL 302

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK-- 706
           I    R     +A  +   M  + + + W  ++++   H +   A R     FR+  +  
Sbjct: 303 ITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADHGHCGEALR----YFRMMQQEG 357

Query: 707 ---NSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
              N   +  L N +++    ++L  +  L++E+
Sbjct: 358 ILPNRVTFISLLNGFTTPSGLEELSRIHLLITEH 391



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 11/256 (4%)

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +YS+C     A   F +I   ++V WN MI+  S      EA   F  M    + P   +
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              VL+SC        G  VHA   + G+  +  V +AL+ MY KCG +  A+  F+ M 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 568 GKNTVTWNEMIHGYAQNG-YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
            KN VTWN M+  Y+  G     AV L+  M+  GVK + ITF+ +L +      +  G 
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 627 EIFNSM-QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            I + + + +H ++  ++  T +++   + G   +A  + D MPC+     W  ++S+  
Sbjct: 181 FIHSCVRESEHSLDVFVN--TALVNTYTKCGSLTDARKVFDGMPCRSVGT-WNSMISA-- 235

Query: 686 LHANVRLAKRAAEELF 701
                 +++R+ E  F
Sbjct: 236 ----YSISERSGEAFF 247


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 212/712 (29%), Positives = 367/712 (51%), Gaps = 57/712 (8%)

Query: 72  FAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
           +A++LFDE P +++  +N L+    RN  + +AL ++  + + G     +TL+   K   
Sbjct: 56  YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
            L D   GR+ H   +K G  +++ V  +L+ +Y K    +    +F+EM   N V++T+
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           ++SG A+     E + +   M  + V+ +  + ++VLG  A E   +E            
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESI-IEG----------- 223

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G QVH + +K GFE    + N+L+ MY K+  +  AE +F ++  R  V+WN+MI 
Sbjct: 224 ----GVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIG 279

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGDIKTGREM 360
           GY       +  ++  RM+  G +         L  C           +  G +K G E 
Sbjct: 280 GYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEF 339

Query: 361 FDSMPSP-------------------------SVSSWNAMLSSYSQSENHKEAIKLFREM 395
              + +                          +V +W AM+  + Q+ N+++A+ LF +M
Sbjct: 340 AQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQM 399

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
              GV+P+  T + +L+   +  +     Q+HA  +K        VA+ L+  Y K    
Sbjct: 400 SREGVRPNHFTYSTVLAGKPSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNV 455

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
             + RVF+ IP  DIV W++M+ GL+      +A   F Q+ +  + P +++F++V+++C
Sbjct: 456 VESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINAC 515

Query: 516 AKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           +  +++ + G+Q+HA   K G  N + V SAL+ MY K G+I  A + F     ++ V+W
Sbjct: 516 SSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSW 575

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI GY Q+G   +A+ +++ M   G+  DD+TF+ +LTAC+H+GLV+ G + FN M  
Sbjct: 576 NSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK 635

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           D+ ++  ++HY+CM+D   RAG F +A  +I+ MP    P IW  LL++CR+H N+ L K
Sbjct: 636 DYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGK 695

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AAE+L  L P ++  Y LL+NI++  G W++   VR+LM E  + K+   S
Sbjct: 696 LAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCS 747



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 160/595 (26%), Positives = 275/595 (46%), Gaps = 88/595 (14%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            V G+ +H   L++G  +D  +   L+++Y                              
Sbjct: 120 QVVGRQVHCQSLKSGFLEDVSVGTSLVDMY------------------------------ 149

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             K++D E    +FDEM  +NVVSW +L+S   RNGL ++ + + N+M  EG  P   T 
Sbjct: 150 -MKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTF 208

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A+V  A      +E G + H +++K G +   +V NAL+ +Y K      A  VF+ M  
Sbjct: 209 ATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVV 268

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + VT+  M+ G A     +E  +MF  M    V +      + L +C++          
Sbjct: 269 RDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQ---------- 318

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL-PERS 302
            Q +  F++     Q+HC  +K G+E    +  +L+  Y+K   +D A  +FS      +
Sbjct: 319 -QRELNFTK-----QLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHN 372

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT---------------------- 340
           VV+W  MI G+ Q   + KA++L  +M   G  P+  T                      
Sbjct: 373 VVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIK 432

Query: 341 ---------SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                    +  +L A V++G++     +F S+P+  + +W+AML+  +Q+ + ++A+++
Sbjct: 433 AYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEV 492

Query: 392 FREMQFRGVKPDRTTLAIILSSC-AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           F ++   GVKP+  T + ++++C ++   +E GKQ+HA ++K+       V+S L+ +YS
Sbjct: 493 FIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYS 552

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP-TQFSFA 509
           K    E AE+VF R  E DIV WNSMI G   +    +A   F Q+ QN+  P    +F 
Sbjct: 553 KKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVF-QIMQNQGLPLDDVTFI 611

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            VL++C       +G +    + KD +++        IE Y    D+Y     FD
Sbjct: 612 GVLTACTHAGLVEEGEKYFNIMIKDYHIDK------KIEHYSCMVDLYSRAGMFD 660



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 151/576 (26%), Positives = 265/576 (46%), Gaps = 63/576 (10%)

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
           ++A  +F+E    +   +  ++   ++ +   EAL +F+ +    + +D ++LS  L V 
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKV- 113

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
               CGV  D            V G+QVHC ++K GF  D+ +  SL+DMY K  D +  
Sbjct: 114 ----CGVLFD-----------QVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDG 158

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--- 348
             IF  +  ++VVSW  +++GY +   + + I L+ +M+  G  P+  T   +L A    
Sbjct: 159 RGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADE 218

Query: 349 --------VRSGDIKTGRE------------------------MFDSMPSPSVSSWNAML 376
                   V +  +K G E                        +FDSM      +WN M+
Sbjct: 219 SIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMI 278

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
             Y+    + E  ++F  M+  GVK  RT     L  C+    L   KQ+H   +K    
Sbjct: 279 GGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYE 338

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
               + + L+  YSKC   + A ++F       ++V W +MI G   N+ + +A   F Q
Sbjct: 339 FAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQ 398

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M +  + P  F+++TVL+   K SS     Q+HAQI K  Y     V +AL++ Y K G+
Sbjct: 399 MSREGVRPNHFTYSTVLA--GKPSSLLS--QLHAQIIKAYYEKVPSVATALLDAYVKTGN 454

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  + + F  +  K+ V W+ M+ G AQ    ++A+ ++  ++  GVKP++ TF +++ A
Sbjct: 455 VVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINA 514

Query: 616 CSHS-GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           CS S   V+ G +I ++  +  G    L   + ++    + G+   AE +      + D 
Sbjct: 515 CSSSAATVEHGKQI-HATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDI 572

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
           V W  +++    H +   AK+A  E+F++      P
Sbjct: 573 VSWNSMITGYGQHGD---AKKAL-EVFQIMQNQGLP 604



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 196/380 (51%), Gaps = 32/380 (8%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEM-PERNVVSWNNLISALVRNGLEEKALSVYNK 110
           +DI +   +  ++C S D   A+KLF       NVV+W  +I   V+N   EKA+ ++ +
Sbjct: 341 QDIRTALMVTYSKCSSVDE--AFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQ 398

Query: 111 MSNEGFVPTHITLASVFKAS-TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           MS EG  P H T ++V     ++LL      + H  +IK   +K   VA ALL  Y K G
Sbjct: 399 MSREGVRPNHFTYSTVLAGKPSSLLS-----QLHAQIIKAYYEKVPSVATALLDAYVKTG 453

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
               +  VF  +   + V ++AM++GLA+T    +A+E+F  ++++ V  +  + SSV+ 
Sbjct: 454 NVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVIN 513

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            C+     VE               HG+Q+H   +K G    L +S++LL MY+K G+++
Sbjct: 514 ACSSSAATVE---------------HGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIE 558

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
           SAE +F+   ER +VSWN MI GYGQ   + KA+E+ Q M++ G   D+VT I +L AC 
Sbjct: 559 SAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACT 618

Query: 350 RSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
            +G ++ G + F+ M         +  ++ M+  YS++    +A+ +   M F       
Sbjct: 619 HAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPF---PASP 675

Query: 405 TTLAIILSSCAAMGILESGK 424
           T    +L++C     LE GK
Sbjct: 676 TIWRTLLAACRVHRNLELGK 695



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 118/514 (22%), Positives = 224/514 (43%), Gaps = 92/514 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G  +HA I++NG    TF+CN LI +Y                                
Sbjct: 223 GGVQVHAMIVKNGFEFTTFVCNALICMY-------------------------------L 251

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           KS+ +  A  +FD M  R+ V+WN +I      G   +   ++++M   G   +     +
Sbjct: 252 KSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCT 311

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM-SEP 184
             K  +   ++   ++ H  V+K G +    +  AL+  Y+KC     A  +F    +  
Sbjct: 312 ALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAH 371

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N VT+TAM+ G  + +   +A+++F  M R+ V  +  + S+VL        G  S + +
Sbjct: 372 NVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA-------GKPSSLLS 424

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           Q             +H   IK  +E    ++ +LLD Y K G++  +  +F ++P + +V
Sbjct: 425 Q-------------LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIV 471

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------------- 351
           +W+ M+ G  Q   S KA+E+  ++   G +P+E T  +++ AC  S             
Sbjct: 472 AWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHAT 531

Query: 352 -----------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                  G+I++  ++F       + SWN+M++ Y Q  + K+A
Sbjct: 532 AVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKA 591

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLI 446
           +++F+ MQ +G+  D  T   +L++C   G++E G++     +K   HID  +   S ++
Sbjct: 592 LEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKD-YHIDKKIEHYSCMV 650

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
            +YS+    + A  + + +P       W +++A 
Sbjct: 651 DLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAA 684



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 2/228 (0%)

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
           R   A ++F   P  DI  +N ++   S N+ D EA   FK +  + +     + +  L 
Sbjct: 53  RPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALK 112

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
            C  L     GRQVH Q  K G++ D+ VG++L++MY K  D    R  FD M  KN V+
Sbjct: 113 VCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVS 172

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W  ++ GYA+NG  DE + L   M   GV P+  TF  +L A +   +++ GV++ ++M 
Sbjct: 173 WTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQV-HAMI 231

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           + +G E        +I    ++    +AE + D M  +D  V W +++
Sbjct: 232 VKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDS-VTWNIMI 278



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 4/163 (2%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +A+L+   K  ++E A K+F    ER++VSWN++I+   ++G  +KAL V+  M N+G  
Sbjct: 545 SALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLP 604

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHAVP 176
              +T   V  A T    VE G +   ++IK   +DK I   + ++ LY++ G    A+ 
Sbjct: 605 LDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMD 664

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           +   M  P   T   +   L    RV   LE+ +L   K VS+
Sbjct: 665 IINGMPFPASPT---IWRTLLAACRVHRNLELGKLAAEKLVSL 704


>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 219/734 (29%), Positives = 362/734 (49%), Gaps = 57/734 (7%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
            D+    A++   CK   +  A K+F EMPER++VSWN LIS  V     ++A+ ++ +M
Sbjct: 93  NDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEM 152

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGW 170
              G  P   T+ ++  A   +L++  G+  HG  ++ GL D + YV  AL+  Y +   
Sbjct: 153 KKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFD- 211

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              +  VF  M   N V++ A+++G        +AL+++  M+ + +  D+V++  V+  
Sbjct: 212 AVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQA 271

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CA  GC                   G Q+H L IK     DL + N+LL+MY+ NG ++S
Sbjct: 272 CAEYGCLRL----------------GMQLHQLAIKFNLINDLFILNALLNMYSDNGSLES 315

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK-------------------- 330
           +  +F+ +P      WN MI+ Y       +AI L  +M+                    
Sbjct: 316 SWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCND 375

Query: 331 ----------------SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNA 374
                             G E D      +L   V+   I   + +F+ M    V SWN 
Sbjct: 376 LNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNT 435

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+S+++QS    +A +LF  M    +K +  T+  +L+ C     L  G+ +H  ++K  
Sbjct: 436 MISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNG 495

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             I+  + + L  +Y  C     A  +F R P+ D+V WNS+I+    N    +A + F 
Sbjct: 496 LEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFN 555

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD--GYVNDIFVGSALIEMYCK 552
            M  +E+ P   +   +L+SC +L+    G+ +HA   +       D  + +A I MY +
Sbjct: 556 HM-ISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYAR 614

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           CG +  A + F  +  ++ V+WN MI GY  +G G +A   +  M+  G KP++++F ++
Sbjct: 615 CGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASV 674

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L+ACSHSGL   G+++F+SM  D G+ P L HY CM+D LGR GHF EA   I+ MP + 
Sbjct: 675 LSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEP 734

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
           D  IW  LLSSC++ +N +L +    +L  L+P N   + LL+NIY++ G W ++  +R+
Sbjct: 735 DASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRK 794

Query: 733 LMSENCIVKDPAYS 746
            + E  + K P  S
Sbjct: 795 WLRERGLGKPPGTS 808



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 172/669 (25%), Positives = 311/669 (46%), Gaps = 61/669 (9%)

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           WN++I    +   +   LS Y +M + G  P   T+  V KA   L  + +G R H  + 
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
            + L  ++ V  AL+  Y KCG    A  VF EM E + V++ A++SG        EA+ 
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +F  M +  ++ +S ++ ++L  C               + +  + +HG   +CL   L 
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGE-----------MLELRLGQEIHG---YCLRNGL- 192

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F+ D ++  +L+  Y +  D   +  +FS +  R++VSWN +I G+       KA++L  
Sbjct: 193 FDMDAYVGTALVGFYMRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYS 251

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---------------------------- 359
            M   G + D VT + ++ AC   G ++ G +                            
Sbjct: 252 SMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNG 311

Query: 360 -------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                  +F+++P+   + WN+M+SSY     H EAI LF +M+   +K D  T+AI+LS
Sbjct: 312 SLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLS 371

Query: 413 SCAAM--GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
            C  +  G +  G+ +HA ++K+   +D Y+ + L+ +Y K  +   A+ VF ++  LD+
Sbjct: 372 LCNDLNDGSIW-GRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDV 430

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           + WN+MI+  + +    +AF  F  M ++E+    ++  ++L+ C   S    GR +H  
Sbjct: 431 ISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGF 490

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
             K+G   +  + ++L EMY  CGD   A   F     ++ V+WN +I  Y +N    +A
Sbjct: 491 AIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKA 550

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH--YTCM 648
           + L+  MI S ++P+ +T + ILT+C+    + +G +  ++      V   +D       
Sbjct: 551 LLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLG-QCLHAYTTRREVSLEMDASLANAF 608

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR--LDPK 706
           I    R G    AE +   +  +   V W  +++   +H   R A  A  ++      P 
Sbjct: 609 ITMYARCGKLQYAEKIFCTLQTR-SIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPN 667

Query: 707 NSAPYSLLA 715
           N +  S+L+
Sbjct: 668 NVSFASVLS 676



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 198/417 (47%), Gaps = 58/417 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G+ LHAH +++G+  D +L N L+ +Y K N   +AQ++F+KM   D+ SWN ++SA 
Sbjct: 381 IWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAF 440

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +S     A++LF  M E                   E   + Y          T ++L 
Sbjct: 441 AQSMFRAKAFELFLMMCE------------------SEIKFNSY----------TIVSLL 472

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +  K  +   D+  GR  HG  IK GL+ N  +  +L  +Y  CG  + A  +F    + 
Sbjct: 473 AFCKDGS---DLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQR 529

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ +++S   K D   +AL +F  MI + +  +SV++ ++L  C             
Sbjct: 530 DLVSWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCT------------ 576

Query: 245 QSDNKFSRNVHGQQVHCLTIK--LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
               + +    GQ +H  T +  +  E D  L+N+ + MYA+ G +  AE IF  L  RS
Sbjct: 577 ----QLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRS 632

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           +VSWN MI GYG   +   A     +M   GF+P+ V+  ++L AC  SG   TG ++F 
Sbjct: 633 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFH 692

Query: 363 SMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           SM      +P ++ +  M+    +  +  EAI     M    ++PD +    +LSSC
Sbjct: 693 SMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMP---IEPDASIWRALLSSC 746



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 205/458 (44%), Gaps = 86/458 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH   ++  L +D F+ N L+ +YS   +  S+  LF+ +P  D             
Sbjct: 281 GMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSD------------- 327

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                WN++IS+ +  G   +A++++ KM  E       T+A +
Sbjct: 328 ------------------AALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIM 369

Query: 127 FKASTALLDVE-HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                 L D    GR  H   +K G++ + Y+ NALLS+Y K      A  VFE+M   +
Sbjct: 370 LSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLD 429

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++  M+S  A++    +A E+F +M    +  +S ++ S+L  C ++G          
Sbjct: 430 VISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFC-KDG---------- 478

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           SD  F R++HG       IK G E +  L+ SL +MY   GD  +A  +F+  P+R +VS
Sbjct: 479 SDLVFGRSIHG-----FAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVS 533

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           WN +I+ Y +   + KA+ L   M S   EP+ VT IN+L +C                 
Sbjct: 534 WNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTIINILTSCTQLAHLPLGQCLHAYTT 592

Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                R G ++   ++F ++ + S+ SWNAM++ Y      ++A
Sbjct: 593 RREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDA 652

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
              F +M   G KP+  + A +LS+C+  G+  +G Q+
Sbjct: 653 TLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQL 690


>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 219/734 (29%), Positives = 362/734 (49%), Gaps = 57/734 (7%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
            D+    A++   CK   +  A K+F EMPER++VSWN LIS  V     ++A+ ++ +M
Sbjct: 93  NDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEM 152

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGW 170
              G  P   T+ ++  A   +L++  G+  HG  ++ GL D + YV  AL+  Y +   
Sbjct: 153 KKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFD- 211

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              +  VF  M   N V++ A+++G        +AL+++  M+ + +  D+V++  V+  
Sbjct: 212 AVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQA 271

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CA  GC                   G Q+H L IK     DL + N+LL+MY+ NG ++S
Sbjct: 272 CAEYGCLRL----------------GMQLHQLAIKFNLINDLFILNALLNMYSDNGSLES 315

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK-------------------- 330
           +  +F+ +P      WN MI+ Y       +AI L  +M+                    
Sbjct: 316 SWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCND 375

Query: 331 ----------------SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNA 374
                             G E D      +L   V+   I   + +F+ M    V SWN 
Sbjct: 376 LNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNT 435

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+S+++QS    +A +LF  M    +K +  T+  +L+ C     L  G+ +H  ++K  
Sbjct: 436 MISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNG 495

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             I+  + + L  +Y  C     A  +F R P+ D+V WNS+I+    N    +A + F 
Sbjct: 496 LEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFN 555

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD--GYVNDIFVGSALIEMYCK 552
            M  +E+ P   +   +L+SC +L+    G+ +HA   +       D  + +A I MY +
Sbjct: 556 HM-ISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYAR 614

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           CG +  A + F  +  ++ V+WN MI GY  +G G +A   +  M+  G KP++++F ++
Sbjct: 615 CGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASV 674

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L+ACSHSGL   G+++F+SM  D G+ P L HY CM+D LGR GHF EA   I+ MP + 
Sbjct: 675 LSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEP 734

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
           D  IW  LLSSC++ +N +L +    +L  L+P N   + LL+NIY++ G W ++  +R+
Sbjct: 735 DASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRK 794

Query: 733 LMSENCIVKDPAYS 746
            + E  + K P  S
Sbjct: 795 WLRERGLGKPPGTS 808



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 172/669 (25%), Positives = 311/669 (46%), Gaps = 61/669 (9%)

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           WN++I    +   +   LS Y +M + G  P   T+  V KA   L  + +G R H  + 
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
            + L  ++ V  AL+  Y KCG    A  VF EM E + V++ A++SG        EA+ 
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +F  M +  ++ +S ++ ++L  C               + +  + +HG   +CL   L 
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGE-----------MLELRLGQEIHG---YCLRNGL- 192

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F+ D ++  +L+  Y +  D   +  +FS +  R++VSWN +I G+       KA++L  
Sbjct: 193 FDMDAYVGTALVGFYMRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYS 251

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---------------------------- 359
            M   G + D VT + ++ AC   G ++ G +                            
Sbjct: 252 SMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNG 311

Query: 360 -------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                  +F+++P+   + WN+M+SSY     H EAI LF +M+   +K D  T+AI+LS
Sbjct: 312 SLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLS 371

Query: 413 SCAAM--GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
            C  +  G +  G+ +HA ++K+   +D Y+ + L+ +Y K  +   A+ VF ++  LD+
Sbjct: 372 LCNDLNDGSIW-GRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDV 430

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           + WN+MI+  + +    +AF  F  M ++E+    ++  ++L+ C   S    GR +H  
Sbjct: 431 ISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGF 490

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
             K+G   +  + ++L EMY  CGD   A   F     ++ V+WN +I  Y +N    +A
Sbjct: 491 AIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKA 550

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH--YTCM 648
           + L+  MI S ++P+ +T + ILT+C+    + +G +  ++      V   +D       
Sbjct: 551 LLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLG-QCLHAYTTRREVSLEMDASLANAF 608

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR--LDPK 706
           I    R G    AE +   +  +   V W  +++   +H   R A  A  ++      P 
Sbjct: 609 ITMYARCGKLQYAEKIFCTLQTR-SIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPN 667

Query: 707 NSAPYSLLA 715
           N +  S+L+
Sbjct: 668 NVSFASVLS 676



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 198/417 (47%), Gaps = 58/417 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G+ LHAH +++G+  D +L N L+ +Y K N   +AQ++F+KM   D+ SWN ++SA 
Sbjct: 381 IWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAF 440

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +S     A++LF  M E                   E   + Y          T ++L 
Sbjct: 441 AQSMFRAKAFELFLMMCE------------------SEIKFNSY----------TIVSLL 472

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +  K  +   D+  GR  HG  IK GL+ N  +  +L  +Y  CG  + A  +F    + 
Sbjct: 473 AFCKDGS---DLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQR 529

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ +++S   K D   +AL +F  MI + +  +SV++ ++L  C             
Sbjct: 530 DLVSWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCT------------ 576

Query: 245 QSDNKFSRNVHGQQVHCLTIK--LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
               + +    GQ +H  T +  +  E D  L+N+ + MYA+ G +  AE IF  L  RS
Sbjct: 577 ----QLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRS 632

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           +VSWN MI GYG   +   A     +M   GF+P+ V+  ++L AC  SG   TG ++F 
Sbjct: 633 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFH 692

Query: 363 SMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           SM      +P ++ +  M+    +  +  EAI     M    ++PD +    +LSSC
Sbjct: 693 SMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMP---IEPDASIWRALLSSC 746



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 205/458 (44%), Gaps = 86/458 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH   ++  L +D F+ N L+ +YS   +  S+  LF+ +P  D             
Sbjct: 281 GMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSD------------- 327

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                WN++IS+ +  G   +A++++ KM  E       T+A +
Sbjct: 328 ------------------AALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIM 369

Query: 127 FKASTALLDVE-HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                 L D    GR  H   +K G++ + Y+ NALLS+Y K      A  VFE+M   +
Sbjct: 370 LSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLD 429

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++  M+S  A++    +A E+F +M    +  +S ++ S+L  C ++G          
Sbjct: 430 VISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFC-KDG---------- 478

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           SD  F R++HG       IK G E +  L+ SL +MY   GD  +A  +F+  P+R +VS
Sbjct: 479 SDLVFGRSIHG-----FAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVS 533

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           WN +I+ Y +   + KA+ L   M S   EP+ VT IN+L +C                 
Sbjct: 534 WNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTIINILTSCTQLAHLPLGQCLHAYTT 592

Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                R G ++   ++F ++ + S+ SWNAM++ Y      ++A
Sbjct: 593 RREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDA 652

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
              F +M   G KP+  + A +LS+C+  G+  +G Q+
Sbjct: 653 TLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQL 690


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 215/718 (29%), Positives = 347/718 (48%), Gaps = 82/718 (11%)

Query: 48   KMPHKDIYSWNA------ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRN-GL 100
            K+P K    WN       ++S+     D   A  +F     RN + WN+ +     + G 
Sbjct: 599  KLPQK----WNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGS 654

Query: 101  EEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANA 160
                L V+ ++  +G V      +   K  T ++D+  G   HG +IK G D ++Y+  A
Sbjct: 655  LHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCA 714

Query: 161  LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
            L++ Y +C   + A  VF EM  P  + +   +    +++++ + +E+FR M    +  +
Sbjct: 715  LMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAE 774

Query: 221  SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
            + ++  VL  C + G               + N   +Q+H    + G ++D+ L N L+ 
Sbjct: 775  TATIVRVLQACGKMG---------------ALNA-AKQIHGYVFRFGLDSDVSLCNPLIS 818

Query: 281  MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
            MY+KNG ++ A  +F ++  R+  SWN MI+ Y        A  L   ++S   +PD VT
Sbjct: 819  MYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVT 878

Query: 341  SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                                           WN +LS +      +E + + + MQ  G 
Sbjct: 879  -------------------------------WNCLLSGHFLHGYKEEVLNILQRMQGEGF 907

Query: 401  KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
            KP+ +++  +L + + +G L  GK+ H   L+     D YV + LI +Y K      A+ 
Sbjct: 908  KPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQA 967

Query: 461  VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ---------------------- 498
            VF  +   +I  WNS+++G S   +  +A     QM +                      
Sbjct: 968  VFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGC 1027

Query: 499  --NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
                  P   S   +L +CA LS   +G+++H    ++G++ D+FV +ALI+MY K   +
Sbjct: 1028 ARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSL 1087

Query: 557  YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
              A + F  +  K   +WN MI G+A  G G EA+ ++ +M   GV PD ITF A+L+AC
Sbjct: 1088 KNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSAC 1147

Query: 617  SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
             +SGL+  G + F+SM  D+ + P L+HY CM+D LGRAG+  EA  LI  MP K D  I
Sbjct: 1148 KNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATI 1207

Query: 677  WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
            W  LL SCR+H N+  A+ AA+ LF+L+P NSA Y L+ N+YS   RW+D+  +RELM
Sbjct: 1208 WGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELM 1265



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 216/426 (50%), Gaps = 20/426 (4%)

Query: 6    AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            A K +H ++ R GL  D  LCN LI +YSK      A+ +FD M +++  SWN+++S+  
Sbjct: 793  AAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYA 852

Query: 66   KSDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                L  A+ LF E+     + ++V+WN L+S    +G +E+ L++  +M  EGF P   
Sbjct: 853  ALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSS 912

Query: 122  TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            ++ SV +A + L  +  G+  HG V++ G D ++YV  +L+ +Y K      A  VF+ M
Sbjct: 913  SMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNM 972

Query: 182  SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES- 240
               N   + +++SG +      +AL +   M ++ +  D V+ + ++   A  GC  ++ 
Sbjct: 973  KNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAF 1032

Query: 241  -------DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
                       ++    S    G+++HCL+I+ GF  D+ ++ +L+DMY+K+  + +A  
Sbjct: 1033 MPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHK 1092

Query: 294  IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
            +F  +  +++ SWN MI G+       +AI +   M+  G  PD +T   +L AC  SG 
Sbjct: 1093 VFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGL 1152

Query: 354  IKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
            I  G + FDSM +     P +  +  M+    ++    EA  L   M    +KPD T   
Sbjct: 1153 IGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMP---LKPDATIWG 1209

Query: 409  IILSSC 414
             +L SC
Sbjct: 1210 ALLGSC 1215



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 148/629 (23%), Positives = 265/629 (42%), Gaps = 125/629 (19%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            G  +H  +++ G   D +L   L+  Y +C     A  +F +MP+ +   WN  +    +
Sbjct: 693  GMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQ 752

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            S+ L                               +K + ++ KM          T+  V
Sbjct: 753  SEKL-------------------------------QKGVELFRKMQFSFLKAETATIVRV 781

Query: 127  FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             +A   +  +   ++ HG V + GLD ++ + N L+S+Y+K G  + A  VF+ M   N 
Sbjct: 782  LQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNT 841

Query: 187  VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS-------------SVLGVCAR 233
             ++ +M+S  A    + +A  +F  +    +  D V+ +              VL +  R
Sbjct: 842  SSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQR 901

Query: 234  -EGCGVESDVFA-----QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
             +G G + +  +     Q+ ++      G++ H   ++ GF+ D+++  SL+DMY KN  
Sbjct: 902  MQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHS 961

Query: 288  MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
            + SA+ +F N+  R++ +WN +++GY  K     A+ LL +M+  G +PD VT       
Sbjct: 962  LXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVT------- 1014

Query: 348  CVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
                                    WN M+S Y+     ++A             P+  ++
Sbjct: 1015 ------------------------WNGMISGYAMWGCARKAF-----------MPNSASI 1039

Query: 408  AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
              +L +CA++ +L+ GK++H  S++     D +VA+ LI +YSK    + A +VF RI  
Sbjct: 1040 TCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQN 1099

Query: 468  LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
              +  WN MI G ++  L  EA   F +M++  + P   +F  +LS+C       +G + 
Sbjct: 1100 KTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKY 1159

Query: 528  HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
                  D  + D  +   L E YC   D+ G                        + GY 
Sbjct: 1160 F-----DSMITDYRIVPRL-EHYCCMVDLLG------------------------RAGYL 1189

Query: 588  DEAVRLYKDMIASGVKPDDITFVAILTAC 616
            DEA  L   M    +KPD   + A+L +C
Sbjct: 1190 DEAWDLIHTM---PLKPDATIWGALLGSC 1215


>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
          Length = 669

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 212/648 (32%), Positives = 337/648 (52%), Gaps = 53/648 (8%)

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW---TKHAVPVFEEMSEPNEVTFTAMMS 194
           H    HG +++  L  + +VA  L++L A        ++A  VF+ M++PN   +  M+ 
Sbjct: 32  HLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIR 91

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G +  +   +AL +FR M R+ VS D+ ++++V            S   A +  K+  N 
Sbjct: 92  GYSSCEAPRDALAVFREMRRRGVSPDNYTMAAV-----------VSASAAFAGLKWRSN- 139

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G  +H L  ++GF +D+ + + L++ Y     +  A  +F  + ER VVSW  MI+   
Sbjct: 140 -GDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACA 198

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------- 358
           Q     K +++L  M++ G  P++VT I++L AC ++  +  GR                
Sbjct: 199 QCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVD 258

Query: 359 -------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                              E F +MP+    SWN ++  + Q+  HKEA+++F EM   G
Sbjct: 259 IRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHG 318

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V PD  TL  +LS+CA +G L  G  VH+         DN + + LI +Y+KC     AE
Sbjct: 319 VTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAE 378

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           RVF  + + D+V W  M+ G         AF  F++M+  E+   + +  ++LS+C++L 
Sbjct: 379 RVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLG 438

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +  +GR++H+ IE+     D+ + SAL++MY KCG I  A + F  M  K T++WN MI 
Sbjct: 439 ALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIG 498

Query: 580 GYAQNGYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
           G A NGYG EAV L+  M+     KPD IT  A+L AC+H G+VD G+  F  M    GV
Sbjct: 499 GLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMS-SLGV 557

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
            P  +HY C++D LGRAG   EA   I +MP + +PVIW  LL++CR+H  + L K   +
Sbjct: 558 VPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQ 617

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +  + P +   + L++N+++   +WDD+  VR LM    I K P +S
Sbjct: 618 HIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHS 665



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 157/617 (25%), Positives = 271/617 (43%), Gaps = 86/617 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +AH+A   LH  ++R  L  D+F+  RLI                            A+L
Sbjct: 30  RAHLAE--LHGRLVRAHLTSDSFVAGRLI----------------------------ALL 59

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           ++     D+ +A K+FD M + N   WN +I           AL+V+ +M   G  P + 
Sbjct: 60  ASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNY 119

Query: 122 TLASVFKASTALLDVE---HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
           T+A+V  AS A   ++   +G   H LV +IG   +++V + L++ Y      K A  VF
Sbjct: 120 TMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVF 179

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           EEM E + V++T+M+S  A+     + L+M   M  + +  + V++ S+L  C +     
Sbjct: 180 EEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQ----- 234

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                 Q+ ++      G+ V+    K G EAD+ + N+L+ MY K G +  A   F  +
Sbjct: 235 -----TQAVDE------GRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAM 283

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG- 357
           P R   SWN +I G+ Q ++  +A+ + + M   G  PD +T +++L AC + G+++ G 
Sbjct: 284 PARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGM 343

Query: 358 ----------------------------------REMFDSMPSPSVSSWNAMLSSYSQSE 383
                                               +F +M    V SW  M+  Y +  
Sbjct: 344 HVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGH 403

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
               A  LF EM+   V      L  +LS+C+ +G L+ G+++H+   +     D  + S
Sbjct: 404 QFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLES 463

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMY 502
            L+ +Y+KC   + A  +F ++     + WN+MI GL+ N    EA   F QM +  +  
Sbjct: 464 ALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPK 523

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +   VL +CA +    +G +    +   G V D      ++++  + G +  A  F
Sbjct: 524 PDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHF 583

Query: 563 FDMMH-GKNTVTWNEMI 578
              M    N V W  ++
Sbjct: 584 IKKMPIEPNPVIWGSLL 600



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 227/514 (44%), Gaps = 94/514 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA + R G   D F+ + L+  Y    +   A  +F++M  +D+ SW +       
Sbjct: 140 GDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTS------- 192

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +ISA  + G  +K L + ++M  EG +P  +T+ S+
Sbjct: 193 ------------------------MISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISL 228

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      V+ GR  +  V K G++ ++ + NAL+S+Y KCG    A+  F+ M     
Sbjct: 229 LSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYT 288

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++  ++ G  +     EAL +F  M+   V+ D ++L SVL  CA+ G           
Sbjct: 289 KSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLG----------- 337

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             +  + +H   VH      G   D  L+NSL++MYAK GDM +AE +F  + ++ VVSW
Sbjct: 338 --ELRKGMH---VHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSW 392

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
            VM+ GY + +Q T A  L + MK       E+  +++L AC + G +  GR        
Sbjct: 393 TVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEE 452

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                      E+F  M      SWNAM+   + +   KEA++L
Sbjct: 453 MNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVEL 512

Query: 392 FREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVH--AASLKTASHIDNYVASGLIGI 448
           F +M + +  KPD  TL  +L +CA +G+++ G +     +SL      ++Y       I
Sbjct: 513 FDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGC-----I 567

Query: 449 YSKCQRNELAERVFHRIPELDI----VCWNSMIA 478
                R  + +  FH I ++ I    V W S++A
Sbjct: 568 VDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLA 601


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 224/776 (28%), Positives = 382/776 (49%), Gaps = 86/776 (11%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + +HA ++  GL    F   +LI+ YS      S+  +F ++                  
Sbjct: 24  RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS----------------- 66

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                        P +NV  WN++I A  +NGL  +AL  Y K+      P   T  SV 
Sbjct: 67  -------------PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVI 113

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA   L D E G   +  ++ +G + +++V NAL+ +Y++ G    A  VF+EM   + V
Sbjct: 114 KACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLV 173

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++ +++SG +      EALE++  +    +  DS ++SSVL                 + 
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVL----------------PAF 217

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   GQ +H   +K G  + + ++N L+ MY K      A  +F  +  R  VS+N
Sbjct: 218 GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYN 277

Query: 308 VMIAGYGQKYQSTKAIEL-LQRMKSCGFEPDEVTSINMLVAC------------------ 348
            MI GY +     +++ + L+ +    F+PD +T  ++L AC                  
Sbjct: 278 TMICGYLKLEMVEESVRMFLENLDQ--FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + GD+ T R++F+SM      SWN+++S Y QS +  EA+KL
Sbjct: 336 AGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKL 395

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+ M     + D  T  +++S    +  L+ GK +H+  +K+   ID  V++ LI +Y+K
Sbjct: 396 FKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAK 455

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     + ++F  +   D V WN++I+                QMR++E+ P   +F   
Sbjct: 456 CGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT 515

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L  CA L++   G+++H  + + GY +++ +G+ALIEMY KCG +  + + F+ M  ++ 
Sbjct: 516 LPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV 575

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           VTW  MI+ Y   G G++A+  + DM  SG+ PD + F+AI+ ACSHSGLVD G+  F  
Sbjct: 576 VTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEK 635

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M+  + ++P+++HY C++D L R+    +AE  I  MP K D  IW  +L +CR   ++ 
Sbjct: 636 MKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDME 695

Query: 692 LAKRAAEELFRLDPKNSAPYSLLA-NIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            A+R +  +  L+P +   YS+LA N Y++L +WD +  +R+ + +  I K+P YS
Sbjct: 696 TAERVSRRIIELNPDDPG-YSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYS 750



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 163/639 (25%), Positives = 286/639 (44%), Gaps = 60/639 (9%)

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
           T ++   + +A ++  ++   RR H LVI +GLD + + +  L+  Y+       ++ VF
Sbjct: 3   TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62

Query: 179 EEMSEPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
             +S    V  + +++   +K     EALE +  +    VS D  +  SV+  CA     
Sbjct: 63  RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA----- 117

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                       F   + G  V+   + +GFE+DL + N+L+DMY++ G +  A  +F  
Sbjct: 118 ----------GLFDAEM-GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDE 166

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-----CVRSG 352
           +P R +VSWN +I+GY       +A+E+   +K+    PD  T  ++L A      V+ G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226

Query: 353 DIKTG------------------------------REMFDSMPSPSVSSWNAMLSSYSQS 382
               G                              R +FD M      S+N M+  Y + 
Sbjct: 227 QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKL 286

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
           E  +E++++F E      KPD  T++ +L +C  +  L   K ++   LK    +++ V 
Sbjct: 287 EMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR 345

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + LI +Y+KC     A  VF+ +   D V WNS+I+G   +   +EA   FK M   E  
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
               ++  ++S   +L+    G+ +H+   K G   D+ V +ALI+MY KCG++  + + 
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F  M   +TVTWN +I    + G     +++   M  S V PD  TF+  L  C+     
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            +G EI   + L  G E  L     +I+   + G    +  + + M  + D V W  ++ 
Sbjct: 526 RLGKEIHCCL-LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIY 583

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSL--LANIYS 719
           +  ++      ++A E    ++     P S+  +A IY+
Sbjct: 584 AYGMYGE---GEKALETFADMEKSGIVPDSVVFIAIIYA 619



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 159/652 (24%), Positives = 292/652 (44%), Gaps = 88/652 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G L++  IL  G   D F+ N L+++YS+      A+ +FD+MP +D+ SWN+       
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNS------- 177

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LIS    +G  E+AL +Y+++ N   VP   T++SV
Sbjct: 178 ------------------------LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSV 213

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   LL V+ G+  HG  +K G++  + V N L+++Y K      A  VF+EM   + 
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M+ G  K + V E++ MF L        D +++SSVL       CG   D+    
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSSVL-----RACGHLRDLSL-- 325

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                     + ++   +K GF  +  + N L+D+YAK GDM +A  +F+++  +  VSW
Sbjct: 326 ---------AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
           N +I+GY Q     +A++L + M     + D +T + ++    R  D+K G+        
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK 436

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                      ++F SM +    +WN ++S+  +  +    +++
Sbjct: 437 SGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQV 496

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
             +M+   V PD  T  + L  CA++     GK++H   L+     +  + + LI +YSK
Sbjct: 497 TTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSK 556

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E + RVF R+   D+V W  MI    +     +A   F  M ++ + P    F  +
Sbjct: 557 CGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAI 616

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMMHGK- 569
           + +C+      +G     +++    ++ +    A ++++  +   I  A +F   M  K 
Sbjct: 617 IYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKP 676

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
           +   W  ++     +G  + A R+ + +I   + PDD  + +IL + +++ L
Sbjct: 677 DASIWASVLRACRTSGDMETAERVSRRIIE--LNPDDPGY-SILASNAYAAL 725


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 215/730 (29%), Positives = 368/730 (50%), Gaps = 79/730 (10%)

Query: 53   DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
            D++   A+++   K   +  A  LFD M  R+VV WN ++ A V   LE +A+ ++++  
Sbjct: 794  DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853

Query: 113  NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
              GF P  +TL ++ +            +C   ++++   K        L +Y   G   
Sbjct: 854  RTGFRPDDVTLRTLSRVV----------KCKKNILEL---KQFKAYATKLFMYDDDG--- 897

Query: 173  HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
                        + + +   +S   +     EA++ F  MI   V+ D ++   +L V A
Sbjct: 898  -----------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVA 946

Query: 233  REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
               C +E                G+Q+H + ++ G +  + + N L++MY K G +  A 
Sbjct: 947  GLNC-LEL---------------GKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRAR 990

Query: 293  VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--- 349
             +F  + E  ++SWN MI+G         ++ +   +      PD+ T  ++L AC    
Sbjct: 991  SVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLE 1050

Query: 350  ---------------------------------RSGDIKTGREMFDSMPSPSVSSWNAML 376
                                             + G ++    +F +     ++SWNA++
Sbjct: 1051 GGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIM 1110

Query: 377  SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
              Y  S +  +A++L+  MQ  G + D+ TL     +   +  L+ GKQ+HA  +K   +
Sbjct: 1111 HGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFN 1170

Query: 437  IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            +D +V SG++ +Y KC   E A RVF  IP  D V W +MI+G   N  +  A   + QM
Sbjct: 1171 LDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQM 1230

Query: 497  RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
            R +++ P +++FAT++ +C+ L++  QGRQ+HA I K     D FV ++L++MY KCG+I
Sbjct: 1231 RLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNI 1290

Query: 557  YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
              AR  F   + +   +WN MI G AQ+G   EA++ +K M + GV PD +TF+ +L+AC
Sbjct: 1291 EDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSAC 1350

Query: 617  SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
            SHSGLV    E F SMQ ++G+EP ++HY+C++D L RAG   EAE +I  MP +    +
Sbjct: 1351 SHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASM 1410

Query: 677  WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
            +  LL++CR+  +    KR AE+L  L+P +SA Y LL+N+Y++  +W+++ + R +M +
Sbjct: 1411 YRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRK 1470

Query: 737  NCIVKDPAYS 746
              + KDP +S
Sbjct: 1471 VNVKKDPGFS 1480



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 174/577 (30%), Positives = 286/577 (49%), Gaps = 40/577 (6%)

Query: 125  SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            S+ + + A  D+  G+R H  ++  G   + +V N L+++YAKCG    A  +F+   + 
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 185  NE--VTFTAMMSGLAK-TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            N   VT+ A++S LA   D+  +   +FRL+ R  VS    +L+ V  +C          
Sbjct: 721  NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMC---------- 770

Query: 242  VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                +    S ++HG       +K+G + D+ ++ +L+++YAK G +  A V+F  +  R
Sbjct: 771  -LLSASPSASESLHG-----YAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR 824

Query: 302  SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT--SINMLVACVRS-------G 352
             VV WNVM+  Y       +A+ L       GF PD+VT  +++ +V C ++        
Sbjct: 825  DVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFK 884

Query: 353  DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
               T   M+D   S  V  WN  LS + Q     EA+  F +M    V  D  T  ++L+
Sbjct: 885  AYATKLFMYDDDGS-DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLT 943

Query: 413  SCAAMGILESGKQVHAASLKTASHIDNYVASG--LIGIYSKCQRNELAERVFHRIPELDI 470
              A +  LE GKQ+H   ++  S +D  V+ G  LI +Y K      A  VF ++ E+D+
Sbjct: 944  VVAGLNCLELGKQIHGIVMR--SGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDL 1001

Query: 471  VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ-GRQVHA 529
            + WN+MI+G +L+ L+  +   F  + ++ + P QF+ A+VL +C+ L   +    Q+HA
Sbjct: 1002 ISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHA 1061

Query: 530  QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
               K G V D FV +ALI++Y K G +  A   F    G +  +WN ++HGY  +G   +
Sbjct: 1062 CAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPK 1121

Query: 590  AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV--GVEIFNSMQLDHGVEPILDHYTC 647
            A+RLY  M  SG + D IT V    A    GLV +  G +I +++ +  G    L   + 
Sbjct: 1122 ALRLYILMQESGERSDQITLVNAAKAA--GGLVGLKQGKQI-HAVVVKRGFNLDLFVTSG 1178

Query: 648  MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
            ++D   + G    A  +  E+P  DD V W  ++S C
Sbjct: 1179 VLDMYLKCGEMESARRVFSEIPSPDD-VAWTTMISGC 1214



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 160/640 (25%), Positives = 287/640 (44%), Gaps = 94/640 (14%)

Query: 6    AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA-- 63
            A + LH + ++ GL  D F+   L+ +Y+K      A+ LFD M  +D+  WN ++ A  
Sbjct: 778  ASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYV 837

Query: 64   ----------------------------------QCKSDDLE------FAYKLF-DEMPE 82
                                              +CK + LE      +A KLF  +   
Sbjct: 838  DTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDG 897

Query: 83   RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
             +V+ WN  +S  ++ G   +A+  +  M N       +T   +      L  +E G++ 
Sbjct: 898  SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQI 957

Query: 143  HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
            HG+V++ GLD+ + V N L+++Y K G    A  VF +M+E + +++  M+SG   +   
Sbjct: 958  HGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLE 1017

Query: 203  VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
              ++ MF  ++R ++  D  +++SVL  C+     +E   +  +           Q+H  
Sbjct: 1018 ECSVGMFVHLLRDSLLPDQFTVASVLRACS----SLEGGYYLAT-----------QIHAC 1062

Query: 263  TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
             +K G   D  +S +L+D+Y+K G M+ AE +F N     + SWN ++ GY       KA
Sbjct: 1063 AMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKA 1122

Query: 323  IELLQRMKSCGFEPDEVTSINMLVAC---------------------------------- 348
            + L   M+  G   D++T +N   A                                   
Sbjct: 1123 LRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDM 1182

Query: 349  -VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
             ++ G++++ R +F  +PSP   +W  M+S   ++   + A+  + +M+   V+PD  T 
Sbjct: 1183 YLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTF 1242

Query: 408  AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
            A ++ +C+ +  LE G+Q+HA  +K     D +V + L+ +Y+KC   E A  +F R   
Sbjct: 1243 ATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNT 1302

Query: 468  LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
              I  WN+MI GL+ +    EA  FFK M+   + P + +F  VLS+C+      +  + 
Sbjct: 1303 RRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYEN 1362

Query: 528  HAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
               ++K+ G   +I   S L++   + G I  A +    M
Sbjct: 1363 FYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSM 1402



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 176/697 (25%), Positives = 312/697 (44%), Gaps = 57/697 (8%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            GK  HA IL +G   D F+ N LI +Y+KC +  SA+                       
Sbjct: 675  GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSAR----------------------- 711

Query: 67   SDDLEFAYKLFDEMPE--RNVVSWNNLISALVRNG-LEEKALSVYNKMSNEGFVPTHITL 123
                    KLFD  P+  R++V+WN ++SAL  +         ++  +       T  TL
Sbjct: 712  --------KLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTL 763

Query: 124  ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            A VFK              HG  +KIGL  +++VA AL+++YAK G  + A  +F+ M+ 
Sbjct: 764  APVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAV 823

Query: 184  PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
             + V +  MM     T    EA+ +F    R     D V+L ++  V   +   +E   F
Sbjct: 824  RDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQF 883

Query: 244  -AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
             A +   F  +  G             +D+ + N  L  + + G+   A   F ++    
Sbjct: 884  KAYATKLFMYDDDG-------------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSR 930

Query: 303  VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP--DEVTSIN--MLVACVRSGDIKTGR 358
            V    +              +EL +++         D+V S+   ++   V++G +   R
Sbjct: 931  VACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRAR 990

Query: 359  EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM- 417
             +F  M    + SWN M+S  + S   + ++ +F  +    + PD+ T+A +L +C+++ 
Sbjct: 991  SVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLE 1050

Query: 418  GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
            G      Q+HA ++K    +D++V++ LI +YSK  + E AE +F      D+  WN+++
Sbjct: 1051 GGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIM 1110

Query: 478  AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
             G  ++    +A   +  M+++     Q +      +   L    QG+Q+HA + K G+ 
Sbjct: 1111 HGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFN 1170

Query: 538  NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
             D+FV S +++MY KCG++  AR+ F  +   + V W  MI G  +NG  + A+  Y  M
Sbjct: 1171 LDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQM 1230

Query: 598  IASGVKPDDITFVAILTACSHSGLVDVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAG 656
              S V+PD+ TF  ++ ACS    ++ G +I  N ++L+   +P +   T ++D   + G
Sbjct: 1231 RLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCG 1288

Query: 657  HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
            +  +A  L      +     W  ++     H N + A
Sbjct: 1289 NIEDARGLFKRTNTR-RIASWNAMIVGLAQHGNAKEA 1324



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 46/293 (15%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            GK +HA +++ G   D F+ + ++++Y KC    SA+ +F ++P  D             
Sbjct: 1157 GKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDD------------ 1204

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                               V+W  +IS  V NG EE AL  Y++M      P   T A++
Sbjct: 1205 -------------------VAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATL 1245

Query: 127  FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             KA + L  +E GR+ H  ++K+    + +V  +L+ +YAKCG  + A  +F+  +    
Sbjct: 1246 VKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRI 1305

Query: 187  VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
             ++ AM+ GLA+     EAL+ F+ M  + V  D V+   VL  C+  G   E+      
Sbjct: 1306 ASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEA------ 1359

Query: 247  DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                      +  + +    G E ++   + L+D  ++ G ++ AE + S++P
Sbjct: 1360 ---------YENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMP 1403


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 217/785 (27%), Positives = 385/785 (49%), Gaps = 96/785 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+ ++ +GL  +  + N L+ +Y KC                              
Sbjct: 77  GRQIHSSVVGSGLTSNIIISNSLVNMYGKCQ----------------------------- 107

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+  A K+FD M  R+VVSW  +++   +NG   +AL   ++M  EG  P  +T  ++
Sbjct: 108 --DVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTI 165

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 L  ++ GR+ H  +I  GL+ +  + NAL+ +Y  CG       VF  M + + 
Sbjct: 166 VDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSV 225

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           + +T M++G ++  +  E L +FR M  + V  + V+  S++ VC               
Sbjct: 226 LLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVC--------------- 270

Query: 247 DNKFSRNV----HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                RN+     G+ +    ++  F +   L+ SL+ +Y + G +D A+ +  ++ +R 
Sbjct: 271 -----RNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRD 325

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-- 360
           VV+WN M+    Q   + +AI LL+RM   GF  ++VT +++L AC     +  GRE+  
Sbjct: 326 VVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHA 385

Query: 361 ----------------------------------FDSMPSPSVSSWNAMLSSYSQSENHK 386
                                             F++MP     SWNA++++   +   +
Sbjct: 386 RVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQ 445

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY-VASGL 445
           +A++LF  M+  G++ +  TL  +L +C  +  L+  +Q+HA +       ++  V + +
Sbjct: 446 DALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSV 505

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL--SLNSLDIEAFMFFKQMRQNEMYP 503
           + +Y++C     A++ F  + E  +V W+ ++A    S +     AF FF++M    + P
Sbjct: 506 VNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKP 565

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQF 562
            + +F + L +CA +++   GR +H +    G+V   + +G+ +I MY KCG    A+  
Sbjct: 566 GEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLV 625

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           FD M  K  ++WN +I  YA NG+  EA+   ++M+  G  PD  T V+IL   SH+GL+
Sbjct: 626 FDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLL 685

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP-CKDDPVIWEVLL 681
           + GVE F S   DHG+EP      C++D L R G    AE LI   P C+ D + W  LL
Sbjct: 686 ERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLL 745

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           ++C+ + + +   R AE +F L+P++S  + +LAN+Y+S+GRW D   +R++M    + K
Sbjct: 746 AACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKK 805

Query: 742 DPAYS 746
           +P  S
Sbjct: 806 EPGCS 810



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 193/726 (26%), Positives = 329/726 (45%), Gaps = 93/726 (12%)

Query: 32  LYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
           +Y KC     A  +FD +  K+++SW  +++A  +                         
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQ------------------------- 35

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
                 NG   +AL ++ +M  EG  P  +       A  A  +++HGR+ H  V+  GL
Sbjct: 36  ------NGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGL 89

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
             NI ++N+L+++Y KC     A  VF+ M   + V++TAM++  A+     +ALE    
Sbjct: 90  TSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSR 149

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M  + V  + V+  +++ VCA                K      G+++H   I  G E D
Sbjct: 150 MDAEGVKPNQVTFVTIVDVCA----------------KLRLLDLGRKIHHRIINEGLEPD 193

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
             L N+L+ MY   G  D  + +FS + + SV+ W  MIAG  Q  Q  + + + ++M  
Sbjct: 194 GILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDL 253

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDS--MPSPSVSS------------------ 371
            G + +EVT ++M+  C     +K G EM D+  + SP  SS                  
Sbjct: 254 EGVKANEVTYMSMVEVCRNLDAVKEG-EMIDARILESPFCSSTLLATSLISLYGQCGILD 312

Query: 372 ----------------WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
                           WNAM+++ +Q+ ++ EAI L R M   G   ++ T   +L +CA
Sbjct: 313 RAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACA 372

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASG--LIGIYSKCQRNELAERVFHRIPELDIVCW 473
            +  L  G+++HA  L     +   VA G  +I +Y KC + E A  VF  +P  D V W
Sbjct: 373 NLEALSQGREIHARVL-LCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSW 431

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH-AQIE 532
           N++I     NS   +A   F  M    +   +F+  ++L +C  L      RQ+H     
Sbjct: 432 NAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAA 491

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ--NGYGDEA 590
                N   VG++++ MY +CG +  A++ FD +  K  V W+ ++  YAQ  +G G  A
Sbjct: 492 GGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRA 551

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
            + +++M A G+KP ++TFV+ L AC+    ++ G  +         VE  L     +I+
Sbjct: 552 FKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIIN 611

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF--RLDPKNS 708
             G+ G   +A+++ D+MP K   + W  L+ +   + +   A  + +E+     DP + 
Sbjct: 612 MYGKCGSPSDAKLVFDQMPEK-CLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSG 670

Query: 709 APYSLL 714
              S+L
Sbjct: 671 TSVSIL 676


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 251/794 (31%), Positives = 382/794 (48%), Gaps = 104/794 (13%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            G  +H  I +     D  +CN LI +Y  C                              
Sbjct: 666  GVQIHGLISKTRYGSDVVVCNVLISMYGSC------------------------------ 695

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG----FVPTHIT 122
             D    A  +FD +  RN +SWN++IS   R G    A  +++ M  EG    F P   T
Sbjct: 696  LDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYT 755

Query: 123  LASVFKASTALLDVEHGRRCHGLVI---------KIGLDKNIYVANALLSLYAKCGWTKH 173
              S+  A+ + +D        GL +         K G  +++YV +AL+S +A+ G T  
Sbjct: 756  FGSLITAACSSVDF-------GLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDD 808

Query: 174  AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
            A  +FE+M   N V+   +M GL K  +   A ++F  M +  V I+S S   +L   + 
Sbjct: 809  AKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSAFS- 866

Query: 234  EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAE 292
                 E  V  +   K      G++VH   I+ G  +  + + N L++MYAK+G +  A 
Sbjct: 867  -----EFSVLEEGRRK------GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADAC 915

Query: 293  VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
             +F  + E+  VSWN +I+G  Q   S  A E   RM+  G  P   T I+ L +C   G
Sbjct: 916  SVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLG 975

Query: 353  DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
             I  G ++                                   F  MP     SWN+++ 
Sbjct: 976  WIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIG 1035

Query: 378  SYSQSENH-KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
            + S SE    +A+K F EM   G    R T   ILS+ +++ + E   Q+HA  LK    
Sbjct: 1036 ALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLS 1095

Query: 437  IDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
             D  + + L+  Y KC      E++F R+ E  D V WNSMI+G   N L  +A      
Sbjct: 1096 DDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWF 1155

Query: 496  MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
            M Q       F+FATVLS+CA +++  +G +VHA   +    +D+ VGSAL++MY KCG 
Sbjct: 1156 MMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGR 1215

Query: 556  IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT-FVAILT 614
            I  A +FF++M  +N  +WN MI GYA++G+G++A++L+  M+  G  PD +   + +L+
Sbjct: 1216 IDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLS 1275

Query: 615  ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
            ACSH G V+ G E F SM   + + P ++H++CM+D LGRAG   E    I+ MP K + 
Sbjct: 1276 ACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNV 1335

Query: 675  VIWEVLLSS-CRLHA-NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
            +IW  +L + CR +  N  L +RAAE L  L+P+N+  Y LLAN+Y+S  +W+D+   R 
Sbjct: 1336 LIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARX 1395

Query: 733  LMSENCIVKDPAYS 746
             M E  + K+   S
Sbjct: 1396 AMKEAAVKKEAGCS 1409



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 180/724 (24%), Positives = 317/724 (43%), Gaps = 87/724 (12%)

Query: 10   LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
            LH   ++ G   + FL N LI +Y +  +  SAQ LFD+M ++++               
Sbjct: 566  LHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNL--------------- 610

Query: 70   LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                            V+W  LIS   +NG  ++A + +  M   GF+P H    S  +A
Sbjct: 611  ----------------VTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRA 654

Query: 130  --STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC-GWTKHAVPVFEEMSEPNE 186
               +     + G + HGL+ K     ++ V N L+S+Y  C      A  VF+ +   N 
Sbjct: 655  CQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNS 714

Query: 187  VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            +++ +++S  ++    V A ++F  M ++ +           G      C         S
Sbjct: 715  ISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAAC---------S 765

Query: 247  DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               F   V  +Q+     K GF  DL++ ++L+  +A+ G  D A+ IF  +  R+VVS 
Sbjct: 766  SVDFGLCVL-EQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSM 824

Query: 307  NVMIAGYGQKYQSTKAIELLQRMKS----------------------------------- 331
            N ++ G  ++ Q   A ++   MK                                    
Sbjct: 825  NGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAH 884

Query: 332  ---CGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                G   ++V   N LV    +SG I     +F+ M      SWN+++S   Q+E  ++
Sbjct: 885  VIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSED 944

Query: 388  AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
            A + F  M+  G  P   TL   LSSCA++G +  G+Q+H   LK     D  V++ L+ 
Sbjct: 945  AAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLA 1004

Query: 448  IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI-EAFMFFKQMRQNEMYPTQF 506
            +Y++        +VF  +PE D V WNS+I  LS +   + +A  +F +M +     ++ 
Sbjct: 1005 LYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRV 1064

Query: 507  SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
            +F  +LS+ + LS      Q+HA + K    +D  +G+AL+  Y KCG++    + F  M
Sbjct: 1065 TFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM 1124

Query: 567  -HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
               ++ V+WN MI GY  N    +A+ L   M+  G + D  TF  +L+AC+    ++ G
Sbjct: 1125 SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERG 1184

Query: 626  VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            +E+ ++  +   +E  +   + ++D   + G    A    + MP + +   W  ++S   
Sbjct: 1185 MEV-HACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYA 1242

Query: 686  LHAN 689
             H +
Sbjct: 1243 RHGH 1246



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 160/596 (26%), Positives = 271/596 (45%), Gaps = 68/596 (11%)

Query: 137  EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
            E  R  H   IK G   N++++N L+++Y + G    A  +F+EMS  N VT+  ++SG 
Sbjct: 561  EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620

Query: 197  AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
             +  +  EA   FR M+R     +  +  S L  C   G          S  K      G
Sbjct: 621  TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG---------PSGCKL-----G 666

Query: 257  QQVHCLTIKLGFEADLHLSNSLLDMYAKNGD-MDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
             Q+H L  K  + +D+ + N L+ MY    D  + A  +F  +  R+ +SWN +I+ Y +
Sbjct: 667  VQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSR 726

Query: 316  KYQSTKAIELLQRMKSCG----FEPDEVTSINMLVA---------CV------------- 349
            +     A +L   M+  G    F+P+E T  +++ A         CV             
Sbjct: 727  RGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGF 786

Query: 350  ---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                           R G     + +F+ M   +V S N ++    + +  + A K+F E
Sbjct: 787  LQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHE 846

Query: 395  MQ-FRGVKPDRTTLAIILSSCAAMGILE----SGKQVHAASLKTASHIDNYVA--SGLIG 447
            M+   G+  D  +  ++LS+ +   +LE     G++VHA  ++T  + DN VA  +GL+ 
Sbjct: 847  MKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN-DNKVAIGNGLVN 903

Query: 448  IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
            +Y+K      A  VF  + E D V WNS+I+GL  N    +A   F +MR+    P+ F+
Sbjct: 904  MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFT 963

Query: 508  FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              + LSSCA L     G Q+H    K G   D+ V +AL+ +Y + G      + F +M 
Sbjct: 964  LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 1023

Query: 568  GKNTVTWNEMIHGYAQNGYG-DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
              + V+WN +I   + +     +AV+ + +M+  G     +TF+ IL+A S   L +V  
Sbjct: 1024 EYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSH 1083

Query: 627  EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            +I +++ L + +         ++ C G+ G  +E E +   M    D V W  ++S
Sbjct: 1084 QI-HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMIS 1138



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 224/477 (46%), Gaps = 52/477 (10%)

Query: 256  GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
             +++H  +IK GF  +L LSN+L+++Y + GD+ SA+ +F  +  R++V+W  +I+GY Q
Sbjct: 563  ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622

Query: 316  KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG----------------------- 352
              +  +A    + M   GF P+     + L AC  SG                       
Sbjct: 623  NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682

Query: 353  ---------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                                R +FD +   +  SWN+++S YS+  +   A  LF  MQ 
Sbjct: 683  VVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQK 742

Query: 398  RGV----KPDRTTL-AIILSSCAAMGI-LESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
             G+    KP+  T  ++I ++C+++   L   +Q+ A   K+    D YV S L+  +++
Sbjct: 743  EGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFAR 802

Query: 452  CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
                + A+ +F ++   ++V  N ++ GL        A   F +M+ + +     S+  +
Sbjct: 803  FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK-DLVGINSDSYVVL 861

Query: 512  LSSCAKLS----SSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQFFDMM 566
            LS+ ++ S       +GR+VHA + + G   N + +G+ L+ MY K G I  A   F++M
Sbjct: 862  LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM 921

Query: 567  HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
              K++V+WN +I G  QN   ++A   +  M  +G  P + T ++ L++C+  G + +G 
Sbjct: 922  VEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGE 981

Query: 627  EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            +I +   L  G++  +     ++      G F E   +   MP + D V W  ++ +
Sbjct: 982  QI-HCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP-EYDQVSWNSVIGA 1036



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 210/436 (48%), Gaps = 40/436 (9%)

Query: 315 QKYQ----STKAIEL-LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSV 369
            +YQ    S +A EL LQ +K  GF  +   S  ++   VR GD+ + +++FD M + ++
Sbjct: 552 NRYQGSCCSEEARELHLQSIKY-GFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNL 610

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI--LESGKQVH 427
            +W  ++S Y+Q+    EA   FR+M   G  P+       L +C   G    + G Q+H
Sbjct: 611 VTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIH 670

Query: 428 AASLKTASHIDNYVASGLIGIYSKC-QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
               KT    D  V + LI +Y  C      A  VF RI   + + WNS+I+  S     
Sbjct: 671 GLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDX 730

Query: 487 IEAFMFFKQMRQNEM----YPTQFSFATVLSSCAKLSSSFQG----RQVHAQIEKDGYVN 538
           + A+  F  M++  +     P +++F ++++  A  SS   G     Q+ A++EK G++ 
Sbjct: 731 VSAYDLFSSMQKEGLGFSFKPNEYTFGSLIT--AACSSVDFGLCVLEQMLARVEKSGFLQ 788

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY---K 595
           D++VGSAL+  + + G    A+  F+ M  +N V+ N ++ G  +   G+ A +++   K
Sbjct: 789 DLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK 848

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC-----MID 650
           D++  G+  D  ++V +L+A S   +++ G      +   H +   L+         +++
Sbjct: 849 DLV--GINSD--SYVVLLSAFSEFSVLEEGRRKGREVHA-HVIRTGLNDNKVAIGNGLVN 903

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
              ++G   +A  +  E+  + D V W  L+S   L  N   ++ AAE   R+    S P
Sbjct: 904 MYAKSGAIADACSVF-ELMVEKDSVSWNSLISG--LDQN-ECSEDAAESFLRMRRTGSMP 959

Query: 711 --YSLLANIYS--SLG 722
             ++L++ + S  SLG
Sbjct: 960 SNFTLISTLSSCASLG 975



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 31/233 (13%)

Query: 4    HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            H     +HA +L+  L DDT + N L+  Y KC   +  + +F +M              
Sbjct: 1079 HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSET----------- 1127

Query: 64   QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                               R+ VSWN++IS  + N L  KA+ +   M  +G      T 
Sbjct: 1128 -------------------RDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTF 1168

Query: 124  ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            A+V  A  ++  +E G   H   I+  ++ ++ V +AL+ +Y+KCG   +A   FE M  
Sbjct: 1169 ATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPL 1228

Query: 184  PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS-LSSVLGVCAREG 235
             N  ++ +M+SG A+     +AL++F  M+      D V+ L  VL  C+  G
Sbjct: 1229 RNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVG 1281



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 2/130 (1%)

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           ++ +  +F ++++       S + R++H Q  K G+V ++F+ + LI +Y + GD+  A+
Sbjct: 540 LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 599

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           + FD M  +N VTW  +I GY QNG  DEA   ++DM+ +G  P+   F + L AC  SG
Sbjct: 600 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659

Query: 621 L--VDVGVEI 628
                +GV+I
Sbjct: 660 PSGCKLGVQI 669


>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
 gi|194704572|gb|ACF86370.1| unknown [Zea mays]
 gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
          Length = 700

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 224/724 (30%), Positives = 378/724 (52%), Gaps = 46/724 (6%)

Query: 24  FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPER 83
           F  N+ +   ++     +A+ LFD MP ++  ++NA+LSA  +   ++ A  LFD MP R
Sbjct: 19  FRSNKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGR 78

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           N VSWN +I+AL  +G    A S++++M         + ++   +      D+E  R   
Sbjct: 79  NTVSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGG----DLELAR--- 131

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
            ++ ++  DK     NA++S YAK G    A+ +  EM  P+ V++ + ++GL ++  +V
Sbjct: 132 DVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMV 191

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFAQSDNKFSRNVHGQQVHCL 262
            A++ F  M++     D  S + +L    R G     S  FA+ +   S NV    +  +
Sbjct: 192 RAVQFFDEMVK-----DMTSWNLMLAGFVRTGDLNAASSFFAKIE---SPNV----ISWV 239

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
           T              LL+ Y + G +  A  +F  +PER+VV+WNVM+ GY       +A
Sbjct: 240 T--------------LLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEA 285

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
            +L   M       + ++   ++    R+G ++  +++ D M    V++  A++  Y Q 
Sbjct: 286 CKLFDEMPI----KNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQR 341

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               +A ++F  M+      D      ++S     GILE    +     +   + D    
Sbjct: 342 NMADDARRIFDGMEVH----DTVCWNTMISGYVQCGILEEAMLL----FQRMPNKDMVSW 393

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + +I  Y++  +   A  +F R+   + V WNS+I+G   N   ++A   F  MR+    
Sbjct: 394 NTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNR 453

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
               ++A+ L +CA L+    GRQ+H  + + G++ND F G+ALI  Y KCG I  A+Q 
Sbjct: 454 ADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQI 513

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           FD M  K+ V+WN +I GYA NG G EA+ ++++M A+GV+PD++TFV IL+ACSH+GL+
Sbjct: 514 FDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLI 573

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D G+  F SM  ++ ++P+ +HY CM+D LGRAG  +EA  L+  M  + +  +W  LL 
Sbjct: 574 DEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLG 633

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           +C +H N  LA+ AAE L  L+P+ ++ Y LL+NI +  G+WD+    R  + E  + K 
Sbjct: 634 ACHMHKNHELAQLAAERLSELEPRKASNYVLLSNISAEAGKWDESEKARASIKEKGVNKP 693

Query: 743 PAYS 746
           P  +
Sbjct: 694 PGLA 697



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/542 (24%), Positives = 242/542 (44%), Gaps = 41/542 (7%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           A +L  A  LRN     T   N ++   ++      A+ LFD MP ++  SWNA+++A  
Sbjct: 37  ARRLFDAMPLRN-----TVTYNAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALS 91

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               +  A  LFD MP R+  SW  ++S   R G  E A  V ++M  +     +  + S
Sbjct: 92  DHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPGDKCTACYNAMIS 151

Query: 126 VFKASTALLD-----------------------VEHGRRCHGLVIKIGLDKNIYVANALL 162
            +  +    D                        + G     +     + K++   N +L
Sbjct: 152 GYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEMVKDMTSWNLML 211

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
           + + + G    A   F ++  PN +++  +++G  +  R+ +A ++F  M  + V   +V
Sbjct: 212 AGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPERNVVAWNV 271

Query: 223 SLSSVLGVCA-REGCGVESDVFAQSDNKFSRNVHG-------QQVHCLTIKLGFEADLHL 274
            L   + +    E C +  ++  ++   ++  + G       Q+   L  K+ F   +  
Sbjct: 272 MLDGYVHLSPIEEACKLFDEMPIKNSISWTTIISGLARAGKLQEAKDLLDKMSFNC-VAA 330

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
             +L+  Y +    D A  IF  +     V WN MI+GY Q     +A+ L QRM +   
Sbjct: 331 KTALMHGYLQRNMADDARRIFDGMEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPN--- 387

Query: 335 EPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
             D V+   M+    + G +     +F  M   +  SWN+++S + Q++   +A+  F  
Sbjct: 388 -KDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFML 446

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+    + D +T A  L +CA + +L  G+Q+H   +++    D++  + LI  Y+KC R
Sbjct: 447 MRRGTNRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGR 506

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              A+++F  +   DIV WN++I G + N    EA   F++M  N + P + +F  +LS+
Sbjct: 507 ILEAKQIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSA 566

Query: 515 CA 516
           C+
Sbjct: 567 CS 568



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 117/238 (49%), Gaps = 11/238 (4%)

Query: 9   LLHAHILRN------GLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSW 57
           L+H ++ RN       +FD     DT   N +I  Y +C     A  LF +MP+KD+ SW
Sbjct: 334 LMHGYLQRNMADDARRIFDGMEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSW 393

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +++   +   +  A  +F  M  RN VSWN++IS  V+N     AL  +  M      
Sbjct: 394 NTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNR 453

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
               T AS  +A   L  +  GR+ H L+++ G   + +  NAL+S YAKCG    A  +
Sbjct: 454 ADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQI 513

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           F+EM   + V++ A++ G A   +  EA+ +FR M    V  D V+   +L  C+  G
Sbjct: 514 FDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAG 571



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 138/318 (43%), Gaps = 44/318 (13%)

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A R+F  +P  + V +N+M++ L+ +    EA   F  M      P +    TV  +   
Sbjct: 37  ARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGM------PGR---NTVSWNAMI 87

Query: 518 LSSSFQGRQVHAQIEKDGY-VNDIFVGSALIEMYCKCGDIYGARQFFDMMHG-KNTVTWN 575
            + S  GR   A+   D   V D F  + ++  Y + GD+  AR   D M G K T  +N
Sbjct: 88  AALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPGDKCTACYN 147

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI GYA+NG  D+A++L ++M A    PD +++ + L   + SG +   V+ F+ M  D
Sbjct: 148 AMISGYAKNGRFDDAMKLLREMPA----PDLVSWNSALAGLTQSGEMVRAVQFFDEMVKD 203

Query: 636 HGV-------------------------EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
                                        P +  +  +++   RAG   +A  L D MP 
Sbjct: 204 MTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMP- 262

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
           + + V W V+L     + ++   + A +    +  KNS  ++ + +  +  G+  + + +
Sbjct: 263 ERNVVAWNVMLDG---YVHLSPIEEACKLFDEMPIKNSISWTTIISGLARAGKLQEAKDL 319

Query: 731 RELMSENCIVKDPAYSLG 748
            + MS NC+    A   G
Sbjct: 320 LDKMSFNCVAAKTALMHG 337



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 5/115 (4%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           HV G+ LH  ++R+G  +D+F  N LI  Y+KC     A+ +FD+M +KDI SWNA++  
Sbjct: 473 HV-GRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDG 531

Query: 64  QCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE 114
              +     A  +F EM    V    V++  ++SA    GL ++ L  +  M+ E
Sbjct: 532 YASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKE 586


>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
 gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
 gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
          Length = 608

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 202/587 (34%), Positives = 310/587 (52%), Gaps = 54/587 (9%)

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           L  L +    ++ A  +F+ +  P       ++S L++     E L+ F  + R+   + 
Sbjct: 25  LHDLLSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVP 84

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
              +  V+  CA         + A S         G+QVHC  I  G   D+ +  +L+D
Sbjct: 85  PGCVPLVVKSCA---------ILAASRQ-------GKQVHCHAIVRGLLGDIFVQTALVD 128

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
            YAKNGDMD A  +F  +P +  +  N +I GY                           
Sbjct: 129 FYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYS-------------------------- 162

Query: 341 SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                    +SGD+   R +FD M   + +SWN+M++ Y+    ++EA++LFR M   G 
Sbjct: 163 ---------KSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGA 213

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAE 459
           +P+  T+A + S CA  G LE+GK   A SL     + N +  + L+ +Y KC+  + A 
Sbjct: 214 RPNAITIATMFSICAKTGDLETGKW--ARSLIAEQDLQNMIVHTALMEMYVKCRAIDEAR 271

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           R F R+ + D+V W++MIAG + N    E+   F++M+     P + +   VLS+CA+L 
Sbjct: 272 REFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLG 331

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S   G Q+ + +E        ++GSALI+MY KCG +  AR  F+ M  K  +TWN M+ 
Sbjct: 332 SDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMR 391

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G A NG+  +A+ LYK+M    V+P++ITFVA+LTAC+H+GLVD G+  F  M+  H V 
Sbjct: 392 GLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVS 451

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P ++H  C++D L ++G   EA   I +M  + + VIW  LLS+CR HA+V LAK AA +
Sbjct: 452 PQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASK 511

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L  L+P NS+ Y LL+NIY+  G W D+R +R+LM    + K  AYS
Sbjct: 512 LLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYS 558



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 209/423 (49%), Gaps = 25/423 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H H +  GL  D F+   L++ Y+K  +   A  +FD+MP KD    N +++   K
Sbjct: 104 GKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSK 163

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S D+  A +LFD M  R   SWN++I+     G  ++AL ++ +M +EG  P  IT+A++
Sbjct: 164 SGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATM 223

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F       D+E G+    L+ +  L +N+ V  AL+ +Y KC     A   F+ M + + 
Sbjct: 224 FSICAKTGDLETGKWARSLIAEQDL-QNMIVHTALMEMYVKCRAIDEARREFDRMQQRDV 282

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V ++ M++G A+  R  E+LE+F  M   +   + V+L  VL  CA+ G    SD     
Sbjct: 283 VAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLG----SDELG-- 336

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             +   +V  Q +  LT  LG        ++L+DMY K G +  A  +F+ +  + V++W
Sbjct: 337 -GQIGSHVESQNLP-LTSYLG--------SALIDMYTKCGHVGRARSVFNRMEHKVVITW 386

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N M+ G      +  AI L + M     +P+E+T + +L AC  +G +  G   F  M  
Sbjct: 387 NSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKT 446

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               SP V     ++    +S   +EA K   +M+   V+P+    + +LS+C A   +E
Sbjct: 447 IHHVSPQVEHCACIVDLLCKSGRLREAYKFICDME---VEPNAVIWSTLLSACRAHADVE 503

Query: 422 SGK 424
             K
Sbjct: 504 LAK 506



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 145/621 (23%), Positives = 258/621 (41%), Gaps = 148/621 (23%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A  LFD +P         LISAL R    ++ L  ++ +   G       +  V K+   
Sbjct: 38  ARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCAI 97

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           L     G++ H   I  GL  +I+V  AL+  YAK G    AV VF+EM   + +    +
Sbjct: 98  LAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCL 157

Query: 193 MSGLAKTDRVV-------------------------------EALEMFRLMIRKAVSIDS 221
           ++G +K+  VV                               EAL +FR M+ +    ++
Sbjct: 158 ITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNA 217

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH---LSNSL 278
           ++++++  +CA+ G  +E+  +A+S                   L  E DL    +  +L
Sbjct: 218 ITIATMFSICAKTG-DLETGKWARS-------------------LIAEQDLQNMIVHTAL 257

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           ++MY K   +D A   F  + +R VV+W+ MIAGY Q  +  +++EL +RMK+   +P+E
Sbjct: 258 MEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNE 317

Query: 339 VTSINMLVAC-----------------------------------VRSGDIKTGREMFDS 363
           VT + +L AC                                    + G +   R +F+ 
Sbjct: 318 VTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNR 377

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M    V +WN+M+   + +   ++AI L++EM    V+P+  T   +L++C   G+++ G
Sbjct: 378 MEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQG 437

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
                  +KT  H+                    + +V H    +D++C +  +      
Sbjct: 438 MSFF-KEMKTIHHV--------------------SPQVEHCACIVDLLCKSGRLR----- 471

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC--------AKLSSSFQGRQVHAQIEKDG 535
               EA+ F   M   E+ P    ++T+LS+C        AKL++S         +E D 
Sbjct: 472 ----EAYKFICDM---EVEPNAVIWSTLLSACRAHADVELAKLAASKL-----LVLEPDN 519

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT-----VTWNEM---IHGY-AQNGY 586
             + I+V   L  +Y   G     R+  D+M  KN       +W E+   +H +  Q+ Y
Sbjct: 520 --SSIYV--LLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTY 575

Query: 587 GDEAVRLYKDMIASGVKPDDI 607
             ++  ++  +   G+  DD+
Sbjct: 576 HPKSAEIFNVVDGMGLHLDDV 596


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 230/773 (29%), Positives = 375/773 (48%), Gaps = 82/773 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H+ I++ GL  D +L N L+ LY+KC     A+HLF                    
Sbjct: 35  GACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLF-------------------- 74

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                      DEMP R+VVSW  L+SA  RN    +AL +++ M   G  P   TL+S 
Sbjct: 75  -----------DEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSA 123

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            ++ +AL + E G + H  V+K+GL+ N  +   L+ LY KC  T     +   + + + 
Sbjct: 124 LRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDV 183

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T M+S L +T +  EAL+++  MI   +  +  +   +LG+ +  G G         
Sbjct: 184 VSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLG--------- 234

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   +G+ +H   I  G E +L L  +++ MYAK   M+ A  +    P+  V  W
Sbjct: 235 ------KGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLW 288

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR---------------- 350
             +I+G+ Q  Q  +A+  L  M+  G  P+  T  ++L A                   
Sbjct: 289 TSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIM 348

Query: 351 ---SGDIKTGREMFD-----------------SMPSPSVSSWNAMLSSYSQSENHKEAIK 390
               GDI  G  + D                  +  P+V SW ++++ +++    +E+++
Sbjct: 349 VGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQ 408

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF EMQ  GV+P+  TL+ IL +C+ M  +   K++H   +KT   ID  V + L+  Y+
Sbjct: 409 LFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYA 468

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
                + A  V   +   DI+ + ++ A L+       A      M  +E+   +FS A+
Sbjct: 469 GGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLAS 528

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
            +S+ A L     G+Q+H    K G+     V ++L+  Y KCG +  A + F  +   +
Sbjct: 529 FISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPD 588

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+WN +I G A NG   +A+  + DM  +GVKPD +TF++++ ACS   L++ G++ F 
Sbjct: 589 RVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFY 648

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM+  + + P LDHY C++D LGR G   EA  +I+ MP K D VI++ LL++C LH NV
Sbjct: 649 SMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNV 708

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
            L +  A     LDP + A Y LLA++Y + G  D     R+LM E  + + P
Sbjct: 709 PLGEDMARRCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRSP 761



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 149/613 (24%), Positives = 281/613 (45%), Gaps = 59/613 (9%)

Query: 107 VYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYA 166
           V N  S   F  T + + S+  + T    ++ G   H  +IK+GL  ++Y++N LL LYA
Sbjct: 7   VSNSFSPCRFRETCLQVLSLCNSQT----LKEGACVHSPIIKVGLQHDLYLSNNLLCLYA 62

Query: 167 KCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS 226
           KC     A  +F+EM   + V++T ++S   +     EAL++F +M+      +  +LSS
Sbjct: 63  KCFGVGQARHLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSS 122

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
            L  C+  G           + +F     G ++H   +KLG E +  L  +L+D+Y K  
Sbjct: 123 ALRSCSALG-----------EFEF-----GAKIHASVVKLGLELNHVLGTTLVDLYTKCD 166

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML- 345
                  + + + +  VVSW  MI+   +  + ++A++L  +M   G  P+E T + +L 
Sbjct: 167 CTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLG 226

Query: 346 -----------VACVRSGDIKTG------------------REMFDSM------PSPSVS 370
                         + S  I  G                  R M D++      P   V 
Sbjct: 227 MPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVC 286

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
            W +++S + Q+   +EA+    +M+  G+ P+  T A +L++ +++  LE G+Q H+  
Sbjct: 287 LWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRV 346

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNEL-AERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
           +      D YV + L+ +Y KC        + F  I   +++ W S+IAG + +  + E+
Sbjct: 347 IMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEES 406

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
              F +M+   + P  F+ +T+L +C+K+ S  Q +++H  I K     D+ VG+AL++ 
Sbjct: 407 VQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDA 466

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y   G    A     MM+ ++ +T+  +     Q G  + A+R+   M    VK D+ + 
Sbjct: 467 YAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSL 526

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
            + ++A +  G+++ G ++ +      G E        ++    + G   +A  +  ++ 
Sbjct: 527 ASFISAAAGLGIMETGKQL-HCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDIT 585

Query: 670 CKDDPVIWEVLLS 682
            + D V W  L+S
Sbjct: 586 -EPDRVSWNGLIS 597



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 147/313 (46%), Gaps = 4/313 (1%)

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
           R T   +LS C +   L+ G  VH+  +K     D Y+++ L+ +Y+KC     A  +F 
Sbjct: 17  RETCLQVLSLCNSQ-TLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFD 75

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            +P  D+V W ++++  + N    EA   F  M  +   P +F+ ++ L SC+ L     
Sbjct: 76  EMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEF 135

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           G ++HA + K G   +  +G+ L+++Y KC       +    +   + V+W  MI    +
Sbjct: 136 GAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVE 195

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
                EA++LY  MI +G+ P++ TFV +L   S  GL     ++ +S  +  GVE  L 
Sbjct: 196 TSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLM 255

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA--EELF 701
             T +I    +     +A  +  + P K D  +W  ++S    ++ VR A  A    EL 
Sbjct: 256 LKTAIICMYAKCRRMEDAIKVSQQTP-KYDVCLWTSIISGFVQNSQVREAVNALVDMELS 314

Query: 702 RLDPKNSAPYSLL 714
            + P N    SLL
Sbjct: 315 GILPNNFTYASLL 327



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 144/359 (40%), Gaps = 80/359 (22%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+ +  K LH +I++  +  D  + N L++ Y+       A  +   M H+DI       
Sbjct: 436 KSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDI------- 488

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                   +++  L + L + G  E AL V   M N+       
Sbjct: 489 ------------------------ITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEF 524

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           +LAS   A+  L  +E G++ H    K G ++   V+N+L+  Y+KCG  + A  VF+++
Sbjct: 525 SLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDI 584

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           +EP+ V++  ++SGLA    + +AL  F  M    V  DSV+  S++  C+      +  
Sbjct: 585 TEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACS------QGS 638

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           +  Q  + F      ++ + +T KL           L+D+  + G ++ A  +   +P  
Sbjct: 639 LLNQGLDYFYSM---EKTYHITPKLDHYV------CLVDLLGRGGRLEEAMGVIETMP-- 687

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
                                           F+PD V    +L AC   G++  G +M
Sbjct: 688 --------------------------------FKPDSVIYKTLLNACNLHGNVPLGEDM 714


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 238/794 (29%), Positives = 387/794 (48%), Gaps = 105/794 (13%)

Query: 7   GKLLHAHIL--RNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           G+ LHAHIL  R  L + +FL + LI +++KC N   A+ L D+     +YS  A     
Sbjct: 62  GQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFA--SVYSCTA----- 114

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +I A + +G  +KA+ ++++M      P    L 
Sbjct: 115 --------------------------MIRAWMEHGRPDKAMELFDRME---VRPNCHALI 145

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM--- 181
           ++  A + L ++  GRR H  +     ++N  + NAL+S+Y+KCG    A   F+ +   
Sbjct: 146 ALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRA 205

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVES 240
           S+ + VT+ AM+S   +     EAL++FR M R  A   +SV+  SVL  C   G     
Sbjct: 206 SKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLE 265

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF----S 296
           DV         R +HG+      +  G E +  +  +L+D Y K G +D A  +F     
Sbjct: 266 DV---------RAIHGR-----IVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGD 311

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------- 348
             P  S+V+ + MI+   Q     +++ L   M   G +P  VT +++L AC        
Sbjct: 312 EEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSA 371

Query: 349 ----------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                                        RS D+   R  FD++ SP V SWNAM ++Y 
Sbjct: 372 TAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYL 431

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES---GKQVHAASLKTASHI 437
           Q    +EA+ LF  M   GV+P   T    L++CAA     +   GK++ +   +     
Sbjct: 432 QHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEG 491

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRI--PELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
           D  VA+  + +Y+KC     A  VF RI     D + WNSM+A    + L  EAF  F+ 
Sbjct: 492 DTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQA 551

Query: 496 MRQNEMY-PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           M   ++  P + +F  VL +    +S  QGR++HA++  +G+ +D  + +AL+ MY KCG
Sbjct: 552 MEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCG 611

Query: 555 DIYGARQFFDMM--HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
            +  A+  FD    + ++ + W  +I GYAQ G  + A++L+  M   GV+P+ +TF++ 
Sbjct: 612 SLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISA 671

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           LTAC+H G ++ G E+ + M  DHG+ P   H++C++D LGR G   EAE L+ E   + 
Sbjct: 672 LTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLL-ERTSQA 730

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
           D + W  LL +C+    +   +R AE + +LDP+ ++ Y +LA++Y++ GRW++   +R+
Sbjct: 731 DVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRK 790

Query: 733 LMSENCIVKDPAYS 746
            M +  I  DP  S
Sbjct: 791 TMLDKGIRADPGCS 804



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 165/689 (23%), Positives = 285/689 (41%), Gaps = 136/689 (19%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH---KDIYSWNAILS 62
           AG+ +H+ I      +++ L N LI +YSKC +   A+  FD++P    +D+ +WNA+  
Sbjct: 159 AGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAM-- 216

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH-I 121
                                        ISA +RNG   +AL ++  M  +G  P + +
Sbjct: 217 -----------------------------ISAFLRNGSAREALQLFRDMDRDGAPPPNSV 247

Query: 122 TLASVFKA--STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF- 178
           T  SV  +     LL +E  R  HG ++  G+++  +V  AL+  Y K G    A  VF 
Sbjct: 248 TFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFL 307

Query: 179 ---EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
              +E    + VT +AM+S   +     E+L +F  M  +      V+L SVL  C+   
Sbjct: 308 RKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQ 367

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
            G        S   F   V  Q +  ++       D  L  +LL  YA++ D+  A   F
Sbjct: 368 VG--------SATAF---VLEQAMEVVSAT----RDNVLGTTLLTTYARSNDLPRARATF 412

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------- 348
             +    VVSWN M A Y Q ++S +A+ L +RM   G  P   T I  L AC       
Sbjct: 413 DAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQT 472

Query: 349 -------------------------------VRSGDIKTGREMFDSMPSPSVS---SWNA 374
                                           + G +   R +F+ + SP+     +WN+
Sbjct: 473 ASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERI-SPARRDCITWNS 531

Query: 375 MLSSYSQSENHKEAIKLFREMQF-RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           ML++Y      KEA +LF+ M+  + VKP++ T   +L +  +   +  G+++HA  +  
Sbjct: 532 MLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN 591

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIP--ELDIVCWNSMIAGLSLNSLDIEAFM 491
               D  + + L+ +Y+KC   + A+ +F +    + D++ W S+IAG +       A  
Sbjct: 592 GFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALK 651

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMY 550
            F  M+Q  + P   +F + L++C       QG ++ + +  D G +      S ++++ 
Sbjct: 652 LFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLL 711

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHG------------------------------ 580
            +CG +  A +  +     + +TW  ++                                
Sbjct: 712 GRCGRLDEAEKLLERTSQADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIV 771

Query: 581 ----YAQNGYGDEAVRLYKDMIASGVKPD 605
               YA  G  +EA  + K M+  G++ D
Sbjct: 772 LASMYAAAGRWNEAATIRKTMLDKGIRAD 800



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 149/291 (51%), Gaps = 17/291 (5%)

Query: 405 TTLAIILSSCAAMGILESGKQVHA--ASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           +T   +L +C  +  L+ G+++HA   S +   H  +++AS LI +++KC     AE + 
Sbjct: 44  STYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALA 103

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
            R     +    +MI     +    +A   F +M   E+ P   +   ++++C+ L +  
Sbjct: 104 DRFA--SVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLA 158

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM---HGKNTVTWNEMIH 579
            GR++H+QI    +  +  +G+ALI MY KCG +  A+Q FD +     ++ VTWN MI 
Sbjct: 159 AGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMIS 218

Query: 580 GYAQNGYGDEAVRLYKDMIASGV-KPDDITFVAILTACSHSGLVDV-GVEIFNSMQLDHG 637
            + +NG   EA++L++DM   G   P+ +TFV++L +C  +GL+ +  V   +   +  G
Sbjct: 219 AFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAG 278

Query: 638 VEPILDHYTCMIDCLGRAGHFHEA-EMLI---DEMPCKDDPVIWEVLLSSC 684
           +E      T ++D  G+ G   +A E+ +   DE P     V    ++S+C
Sbjct: 279 IEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEP-STSLVTCSAMISAC 328



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/419 (22%), Positives = 183/419 (43%), Gaps = 79/419 (18%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           + A   GK + + +   GL  DT + N  + +Y+KC +   A+ +F+++           
Sbjct: 471 QTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERI----------- 519

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PT 119
                                 R+ ++WN++++A   +GL ++A  ++  M  E  V P 
Sbjct: 520 ------------------SPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPN 561

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
            +T  +V  AST+   +  GR  H  V+  G + +  + NALL++YAKCG    A  +F+
Sbjct: 562 KVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFD 621

Query: 180 EMSEPNE--VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC-----A 232
           + S   E  + +T++++G A+  +   AL++F  M ++ V  + V+  S L  C      
Sbjct: 622 KSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKL 681

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
            +GC + S +            HG             A  H S  ++D+  + G +D AE
Sbjct: 682 EQGCELLSGMTPD---------HGI----------LPASKHFS-CIVDLLGRCGRLDEAE 721

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-----FEPDEVTS----IN 343
            +     +  V++W  ++        + K  + L+R + C       +P+  +S     +
Sbjct: 722 KLLERTSQADVITWMALL-------DACKNSKELERGERCAERIMQLDPEVASSYIVLAS 774

Query: 344 MLVACVRSGDIKTGRE-MFD----SMPSPSVSSWNAMLSSYSQSE-NHKEAIKLFREMQ 396
           M  A  R  +  T R+ M D    + P  S    N  L S+S  + +H ++ +++ E++
Sbjct: 775 MYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELE 833


>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
 gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 230/773 (29%), Positives = 379/773 (49%), Gaps = 86/773 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  H  I+R G     F+ N L+ +Y KC +   A+ +F+KM  +D+ S          
Sbjct: 247 GKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLS---------- 296

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             V SW  +I+A   NG   +A  ++ KM  EG +P  +T  +V
Sbjct: 297 ------------------VYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTV 338

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM-SEPN 185
            +A T L   E   +    V  +GL+ +  +  A +S +AK G    A  VFE + S  N
Sbjct: 339 LRACTTLAQCE---KIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRN 395

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T M+   A+   +  A ++++   R     ++V+  +V+  C R            
Sbjct: 396 VVSWTVMIWAYAQQGFIRAAFDLYK---RMDCEPNAVTFMAVMDSCLRP----------- 441

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                 R    +Q+H   +  GFE+D+ L   L+ MY K G +DSA  IF NL ERSVV+
Sbjct: 442 --EDLPR---AEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVA 496

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN M++ +       ++++L +RM   G +PD++T + +L AC                 
Sbjct: 497 WNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEARRYAATFELEL 556

Query: 349 ------------VRSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                        R G +K  +  FD++    +  +WNAM+S  +Q    K+A++ F +M
Sbjct: 557 DIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKM 616

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
           +  GV+ +  T    L +C+++  L  G+Q+HA  L    H  N +++ +I +Y KC   
Sbjct: 617 ELEGVRANSVTYLASLEACSSLKDLTRGRQLHARILLENIHEAN-LSNAVINMYGKCGSL 675

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
           + A   F ++PE D++ WN+MIA  + +    +A  FFKQM      P + ++   + +C
Sbjct: 676 DEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDAC 735

Query: 516 AKLSSSFQGRQVHAQIEKDGYV--NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
             + S   G+ +H+ +         D  V +AL+ MY +CG ++ A+  F   H +N VT
Sbjct: 736 GSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVT 795

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV-DVGVEIFNSM 632
           W+ +I   AQ+G  +EA+ L+++M   G KPD +TF  ++ ACS  G+V D G  IF+++
Sbjct: 796 WSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDAL 855

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
              + V    +HY CM++ LGRAG   EAE LI  MP K    IW  LL++C    ++  
Sbjct: 856 GRVYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRGDLER 915

Query: 693 AKRAAEELFRLDPKN-SAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
             RAA    +LDP + +A  ++LA +Y + GRW+D   VR+ +      ++P 
Sbjct: 916 GIRAANRAQQLDPGSFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPG 968



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 197/741 (26%), Positives = 346/741 (46%), Gaps = 114/741 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++  G+ +   + N ++ LY KC   H A+ +F+++P +++ SWNA       
Sbjct: 146 GKAIHDCVVLAGM-ETQVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNA------- 197

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLAS 125
                                   LI+A  +NG  + A+ V+  M  +G V P   T  S
Sbjct: 198 ------------------------LIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVS 233

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A + LLD+  G+  H  +I+ G D  ++V N+L+++Y KCG   HA  VFE+M   +
Sbjct: 234 VVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRD 293

Query: 186 EV---TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
            +   ++T +++  A    ++EA  +F  M  + V  + V+  +VL  C           
Sbjct: 294 VLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACT---------T 344

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL-PER 301
            AQ +  F+R  H          LG E D  L  + +  +AK GD+ +A  +F NL   R
Sbjct: 345 LAQCEKIFARVKH----------LGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSR 394

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQR-------------MKSC---------------- 332
           +VVSW VMI  Y Q+     A +L +R             M SC                
Sbjct: 395 NVVSWTVMIWAYAQQGFIRAAFDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHM 454

Query: 333 ---GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
              GFE D V  + ++    + G + +   +F+++   SV +WN+MLS+++ +  ++ ++
Sbjct: 455 VASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSL 514

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           KL+  M   G KPD+ T   +L +C ++    S  + +AA+ +    +D    +  +  Y
Sbjct: 515 KLYERMLLEGTKPDKITYLAVLDACQSV----SEARRYAATFEL--ELDIAARNAAVSAY 568

Query: 450 SKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           ++C   + A+  F  I  + + V WN+MI+GL+ +    +A   F +M    +     ++
Sbjct: 569 ARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTY 628

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
              L +C+ L    +GRQ+HA+I  +  +++  + +A+I MY KCG +  A   F  M  
Sbjct: 629 LASLEACSSLKDLTRGRQLHARILLEN-IHEANLSNAVINMYGKCGSLDEAMDEFVKMPE 687

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           ++ ++WN MI  YAQ+G G +A+  +K M   G  PD  T++  + AC     + +G  I
Sbjct: 688 RDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTI 747

Query: 629 FN-------SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            +        ++ D GV       T ++    R G  H+A+ +      + + V W  L+
Sbjct: 748 HSIVATAAPCLEQDPGVA------TALVTMYARCGSLHDAKSVFWRSHSR-NLVTWSNLI 800

Query: 682 SSCRLHANVRLAKRAAEELFR 702
           ++C  H      +  A +LFR
Sbjct: 801 AACAQHGR----ENEALDLFR 817



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 189/731 (25%), Positives = 335/731 (45%), Gaps = 98/731 (13%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           +K+  AGKL+H HIL +G   + +L N LI +Y+KC     A  +F+ +P  +++SW A 
Sbjct: 39  QKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTA- 97

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
                                         LI+A  + G   + L  + KM  +G  P  
Sbjct: 98  ------------------------------LITAYAKEGHLREVLGFFRKMQLDGTKPDA 127

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
              ++V  A ++   +  G+  H  V+  G++  + V NA+++LY KCG    A  VFE 
Sbjct: 128 FVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFER 186

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVE 239
           + E N V++ A+++  A+     +A+++F+LM +  +V  +  +  SV+  C        
Sbjct: 187 LPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDAC-------- 238

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                   +       G+  H   I+ GF++ L + NSL++MY K G +D A ++F  + 
Sbjct: 239 --------SNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMR 290

Query: 300 ER---SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------- 349
            R   SV SW V+IA +       +A  L  +M   G  P++VT + +L AC        
Sbjct: 291 LRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCEK 350

Query: 350 -------------------------RSGDIKTGREMFDSMPSP-SVSSWNAMLSSYSQSE 383
                                    + GD+   R++F+++ S  +V SW  M+ +Y+Q  
Sbjct: 351 IFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQG 410

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
             + A  L++ M     +P+  T   ++ SC     L   +Q+HA  + +    D  +  
Sbjct: 411 FIRAAFDLYKRMD---CEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQV 467

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            L+ +Y KC   + A  +F  + E  +V WNSM++  + N     +   +++M      P
Sbjct: 468 CLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKP 527

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            + ++  VL +C  +S   + R+  A  E +    DI   +A +  Y +CG +  A+  F
Sbjct: 528 DKITYLAVLDACQSVS---EARRYAATFELE---LDIAARNAAVSAYARCGSLKEAKAAF 581

Query: 564 DMMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           D +  K N VTWN MI G AQ+G   +A+  +  M   GV+ + +T++A L ACS    +
Sbjct: 582 DAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDL 641

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
             G ++   + L++  E  L +   +I+  G+ G   EA     +MP + D + W  +++
Sbjct: 642 TRGRQLHARILLENIHEANLSN--AVINMYGKCGSLDEAMDEFVKMP-ERDVISWNTMIA 698

Query: 683 SCRLHANVRLA 693
           +   H + R A
Sbjct: 699 TYAQHGSGRQA 709



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 168/668 (25%), Positives = 291/668 (43%), Gaps = 82/668 (12%)

Query: 110 KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           K S+E   P     AS+ +          G+  H  ++  G   N Y+ N L+ +YAKCG
Sbjct: 18  KKSSESLQPAR--YASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCG 75

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
             + AV VFE +  PN  ++TA+++  AK   + E L  FR M       D+   S+VL 
Sbjct: 76  CLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLT 135

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            C+  G   E                G+ +H   +  G E  + + N+++++Y K G + 
Sbjct: 136 ACSSAGALNE----------------GKAIHDCVVLAGMETQV-VGNAIVNLYGKCGRVH 178

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVAC 348
            A+ +F  LPER++VSWN +IA   Q      A+++ Q M   G   P++ T ++++ AC
Sbjct: 179 EAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDAC 238

Query: 349 V-----------------------------------RSGDIKTGREMFDSM---PSPSVS 370
                                               + G +   R +F+ M      SV 
Sbjct: 239 SNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVY 298

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           SW  ++++++ + +  EA  LF +M   GV P++ T   +L +C  +   E   ++ A  
Sbjct: 299 SWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCE---KIFARV 355

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI-PELDIVCWNSMIAGLSLNSLDIEA 489
                 +D  + +  +  ++K      A  VF  +    ++V W  MI   +       A
Sbjct: 356 KHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAA 415

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
           F  +K+M   +  P   +F  V+ SC +     +  Q+HA +   G+ +D+ +   L+ M
Sbjct: 416 FDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTM 472

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y KCG +  A   F+ +  ++ V WN M+  +A NG  + +++LY+ M+  G KPD IT+
Sbjct: 473 YGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITY 532

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           +A+L AC            F  ++LD      +      +    R G   EA+   D + 
Sbjct: 533 LAVLDACQSVSEARRYAATFE-LELD------IAARNAAVSAYARCGSLKEAKAAFDAIQ 585

Query: 670 CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK----NSAPYSLLANIYSSLGRWD 725
            K++ V W  ++S    H     +K+A E  ++++ +    NS  Y       SSL    
Sbjct: 586 WKNNAVTWNAMISGLAQHGE---SKQALECFWKMELEGVRANSVTYLASLEACSSL---K 639

Query: 726 DLRAVREL 733
           DL   R+L
Sbjct: 640 DLTRGRQL 647


>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
          Length = 716

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 206/624 (33%), Positives = 319/624 (51%), Gaps = 55/624 (8%)

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK---AV 217
           LLS YA  G    A  VF+    P+  ++ AM+  L +T+R  +A+ +   M R+     
Sbjct: 103 LLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPE 162

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
           + D   LS  L  C R               ++S   +G+ +HC  IK+G  AD  + NS
Sbjct: 163 AQDDFVLSLALKACIRSA-------------EYS---YGRSLHCDAIKVG-GADGFVMNS 205

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L+DMYAK  D++ A  +F  +P+R+VVSW  MI+G  Q   ++  + L  +M+     P 
Sbjct: 206 LVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPS 265

Query: 338 EVTSINMLVAC-----------------------------------VRSGDIKTGREMFD 362
           E T   ++ AC                                   V+ G++   R +FD
Sbjct: 266 EYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFD 325

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            +    +  W  M+  Y+Q+ N  +A++LF + +F  + P+  T A +LS+ A +  L  
Sbjct: 326 ELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSL 385

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           GK +H  ++K      N V + L+ +Y+KCQ    A+R+F RI   D+V WNSMI+G + 
Sbjct: 386 GKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAE 445

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           N++  +A M FKQM      P   S    LS+   L     G+ +H    K  +V++I+V
Sbjct: 446 NNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYV 505

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            +AL+ +Y KCGD+  AR+ FD M+ +N+VTW  MI GY   G    ++ L+ +M+  GV
Sbjct: 506 DTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGV 565

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
            P+DI F +IL+ CSHSG+V  G   F+SM     + P + HY CM+D L RAG+  +A 
Sbjct: 566 YPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDAL 625

Query: 663 MLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
             ID MP + D  +W   L  C LH+ ++ A+ A + +  L P+    Y L++N+Y+S G
Sbjct: 626 EFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNG 685

Query: 723 RWDDLRAVRELMSENCIVKDPAYS 746
            WD   A+R  M E  +VK P  S
Sbjct: 686 MWDKSLAIRRWMQEKGLVKLPGCS 709



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 228/476 (47%), Gaps = 57/476 (11%)

Query: 48  KMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSV 107
           K+   D +  N+++    K++DLE A K+F+ +P+RNVVSW ++IS  V+NG     L +
Sbjct: 194 KVGGADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLL 253

Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
           +NKM  +   P+  T+A+V  A +AL  +  GR  HG VIK GL  N +++ ALL +Y K
Sbjct: 254 FNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVK 313

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
           CG   HA  VF+E+S  + V +T M+ G  +    ++AL +F       ++ +SV+ ++V
Sbjct: 314 CGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATV 373

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           L   A+             D    +++HG     L +KLG      + N+L+DMYAK   
Sbjct: 374 LSASAQ-----------LRDLSLGKSIHG-----LAVKLGLVEYNVVGNALVDMYAKCQA 417

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           +  A+ IF  +  + VV+WN MI+GY +      A+ L ++M   G  PD ++ +N L A
Sbjct: 418 VSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSA 477

Query: 348 CV-----------------------------------RSGDIKTGREMFDSMPSPSVSSW 372
            V                                   + GD+ + R +FD M   +  +W
Sbjct: 478 SVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTW 537

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH---AA 429
            AM+  Y    +   +I LF EM   GV P+      ILS+C+  G++ +GK+     A 
Sbjct: 538 CAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQ 597

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS 484
                  + +Y    ++ + ++    E A      +P + D   W + + G  L+S
Sbjct: 598 HFNITPSMKHYAC--MVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHS 651



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 159/669 (23%), Positives = 294/669 (43%), Gaps = 92/669 (13%)

Query: 8   KLLHAHILRN--GLFDDTFLC-NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           ++LHA +L +  GL   +     +L+  Y+   +  SA+ +FD  P  D YS+ A+L   
Sbjct: 79  RVLHARLLTHPQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCL 138

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +++    A  L  +M  R                            + + FV     L+
Sbjct: 139 VQTERHADAVALHHDMRRRRPC-----------------------PEAQDDFV-----LS 170

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
              KA     +  +GR  H   IK+G   + +V N+L+ +YAK    + A  VFE + + 
Sbjct: 171 LALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKVFERIPDR 229

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++T+M+SG  +     + L +F  M +  V     ++++V+  C        S +F 
Sbjct: 230 NVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITAC--------SALFG 281

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+ +H   IK G  ++  +S +LLDMY K G++D A  +F  L    +V
Sbjct: 282 LH--------QGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLV 333

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------ 358
            W  MI GY Q      A+ L    +     P+ VT+  +L A  +  D+  G+      
Sbjct: 334 LWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLA 393

Query: 359 -----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                         +F  + +  V +WN+M+S Y+++    +A+
Sbjct: 394 VKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDAL 453

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF++M  +G  PD  ++   LS+   +G L  GK +H  ++K A   + YV + L+ +Y
Sbjct: 454 MLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLY 513

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC     A RVF  + + + V W +MI G  +      +   F +M ++ +YP   +F 
Sbjct: 514 NKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFT 573

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMMHG 568
           ++LS+C+       G++    + +   +       A ++++  + G++  A +F D M  
Sbjct: 574 SILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPM 633

Query: 569 K-NTVTWNEMIHG---YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
           + +T  W   +HG   +++  + +EA++  + M+    +PD   +V I    + +G+ D 
Sbjct: 634 QADTSVWGAFLHGCELHSRLQFAEEAIK--RMMVLHPERPD--LYVLISNLYTSNGMWDK 689

Query: 625 GVEIFNSMQ 633
            + I   MQ
Sbjct: 690 SLAIRRWMQ 698



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 193/413 (46%), Gaps = 55/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +++ GL  ++F+   L+++Y KC     A+ +FD++ + D+            
Sbjct: 285 GRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDL------------ 332

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                              V W  +I    +NG    AL ++         P  +T A+V
Sbjct: 333 -------------------VLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATV 373

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             AS  L D+  G+  HGL +K+GL +   V NAL+ +YAKC     A  +F  +S  + 
Sbjct: 374 LSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDV 433

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + +M+SG A+ +   +AL +F+ M  +  S D++S+ + L      G     D+    
Sbjct: 434 VAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLG-----DLLI-- 486

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ +H   +K  F +++++  +LL++Y K GD+ SA  +F  + +R+ V+W
Sbjct: 487 ---------GKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTW 537

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             MI GYG +  S  +I L   M   G  P+++   ++L  C  SG +  G+  FDSM  
Sbjct: 538 CAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQ 597

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               +PS+  +  M+   +++ N ++A++    M    ++ D +     L  C
Sbjct: 598 HFNITPSMKHYACMVDVLARAGNLEDALEFIDNMP---MQADTSVWGAFLHGC 647


>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
 gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
          Length = 756

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 226/722 (31%), Positives = 377/722 (52%), Gaps = 53/722 (7%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
            F  N+ +   ++     +A+ LF++MP +++ S+NA++SA      L  A +LFDEMP 
Sbjct: 11  VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA-----STALLDVE 137
           RN VSWN ++ A  ++G  E A  +++ M         I ++   +A     +  LLD  
Sbjct: 71  RNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRM 130

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
            G +C                N ++S YAK G  + A+ + +EM  P+ V++ +++ GL 
Sbjct: 131 PGEKCAACY------------NTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLI 178

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
           + + +  +++ F  M  K    D VS + +L    R G   + DV   +   FSR     
Sbjct: 179 RNEEISRSVQFFDEMPDK----DLVSWNLMLEGYVRAG---DLDV---ASAFFSRIPSPN 228

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
            +  +              +L++ Y + G M  A  +F  +PER+VV+WNV+++GY Q  
Sbjct: 229 VISWV--------------NLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFS 274

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
           Q   A  L   M     E + ++   M+   VRSG ++  +++   MPS +V +  A++ 
Sbjct: 275 QVEAAYNLFIEMP----EKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMH 330

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y +S    +A +LF  +  R    D      ++S     G+L+    +     +   + 
Sbjct: 331 GYLKSNLIDDARQLFDGIVVR----DAVCWNTMISGYVQCGMLDEAMVL----FQQMPNK 382

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D    + +I   ++  +   A  +F ++   + V WNS+I+G   N L +EA   F  MR
Sbjct: 383 DMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMR 442

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           ++       ++A  LS+ A L++   GRQ H+ + + G+++D   G+ALI  Y KCG + 
Sbjct: 443 RDAKSADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRML 502

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            ARQ FD M  ++ V+WN +I GYA NG G E + ++++M A+ V+PD+IT V +L+ACS
Sbjct: 503 EARQVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACS 562

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           H+GL+D G+  FNSM   + ++P+ +HYTCM+D LGRAG   EA  L+  M  + +  +W
Sbjct: 563 HAGLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVW 622

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
             LL +CR+H N  +A  AAE+LF L+P  ++ Y LL+NI    G+WDD   VR LM E+
Sbjct: 623 GALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLLSNICVEAGKWDDADKVRVLMKES 682

Query: 738 CI 739
            +
Sbjct: 683 IL 684



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 11/238 (4%)

Query: 9   LLHAHILRN------GLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSW 57
           L+H ++  N       LFD     D    N +I  Y +C     A  LF +MP+KD+ SW
Sbjct: 328 LMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISW 387

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +++   +   +  A  +F +M  RN VSWN++IS  V+NGL  +AL  +  M  +   
Sbjct: 388 NTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKS 447

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
               T A    AS  L  ++ GR+ H L+++ G   +    NAL+S YAKCG    A  V
Sbjct: 448 ADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQV 507

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           F+EM   + V++ A++ G A      E + +FR M   +V  D ++L  VL  C+  G
Sbjct: 508 FDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAG 565



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 64/225 (28%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  H+ ++R G   D+   N LI  Y+KC     A+ +FD+M  +DI SWNA       
Sbjct: 469 GRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNA------- 521

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LI     NG   + ++V+ +M      P  ITL  V
Sbjct: 522 ------------------------LIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVV 557

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A +      H     GL+     D+ ++  N+++ LY+         PV E       
Sbjct: 558 LSACS------HA----GLI-----DEGLHFFNSMIKLYS-------LKPVAEH------ 589

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             +T M+  L +  R+ EA E+ + M    +  ++    ++LG C
Sbjct: 590 --YTCMVDLLGRAGRLREAFELVQGM---QIQPNAGVWGALLGAC 629


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 209/696 (30%), Positives = 361/696 (51%), Gaps = 54/696 (7%)

Query: 89  NNLISALVRNGLEEKALSVYN-KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           N+ I++L ++    +AL  ++    N  F     T  S+  A ++   +  GR+ H  ++
Sbjct: 35  NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
                 +  + N +LS+Y KCG  + A  VF+ M E N V++T++++G ++  +  EA+ 
Sbjct: 95  NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           ++  M+++ +  D  +  S++  CA       SDV             G+Q+H   IKL 
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASS-----SDVGL-----------GKQLHAQVIKLE 198

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
             + L   N+L+ MY +   M  A  +F  +P + ++SW+ +IAG+ Q     +A+  L+
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258

Query: 328 RMKSCG-FEPDEVTSINMLVAC-----------------------------------VRS 351
            M S G F P+E    + L AC                                    R 
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           G + + R +FD +  P  +SWN +++  + +    EA+ +F +M+  G  PD  +L  +L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE-LDI 470
            +      L  G Q+H+  +K     D  V + L+ +Y+ C        +F       D 
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           V WN+++     +   +E    FK M  +E  P   +   +L  C ++SS   G QVH  
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
             K G   + F+ + LI+MY KCG +  AR+ FD M  ++ V+W+ +I GYAQ+G+G+EA
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           + L+K+M ++G++P+ +TFV +LTACSH GLV+ G++++ +MQ +HG+ P  +H +C++D
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 618

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            L RAG  +EAE  IDEM  + D V+W+ LLS+C+   NV LA++AAE + ++DP NS  
Sbjct: 619 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 678

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + LL ++++S G W++   +R  M ++ + K P  S
Sbjct: 679 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 161/650 (24%), Positives = 288/650 (44%), Gaps = 90/650 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H HIL +    DT L N ++ +Y KC +   A+                       
Sbjct: 86  GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAR----------------------- 122

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++FD MPERN+VS+ ++I+   +NG   +A+ +Y KM  E  VP      S+
Sbjct: 123 --------EVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSI 174

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA  +  DV  G++ H  VIK+    ++   NAL+++Y +      A  VF  +   + 
Sbjct: 175 IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDL 234

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           ++++++++G ++     EAL   + M+   V   +     S L  C+             
Sbjct: 235 ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS------------- 281

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                 R  +G Q+H L IK     +     SL DMYA+ G ++SA  +F  +      S
Sbjct: 282 ---SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
           WNV+IAG      + +A+ +  +M+S GF PD ++  ++L A  +   +  G +      
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398

Query: 360 -----------------------------MFDSMPSPSVS-SWNAMLSSYSQSENHKEAI 389
                                        +F+   + + S SWN +L++  Q E   E +
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +LF+ M     +PD  T+  +L  C  +  L+ G QVH  SLKT    + ++ +GLI +Y
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC     A R+F  +   D+V W+++I G + +    EA + FK+M+   + P   +F 
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH- 567
            VL++C+ +    +G +++A ++ + G        S ++++  + G +  A +F D M  
Sbjct: 579 GVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL 638

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
             + V W  ++      G     V L +    + +K D     A +  CS
Sbjct: 639 EPDVVVWKTLLSACKTQG----NVHLAQKAAENILKIDPFNSTAHVLLCS 684


>gi|413918395|gb|AFW58327.1| hypothetical protein ZEAMMB73_709604 [Zea mays]
          Length = 906

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 235/762 (30%), Positives = 376/762 (49%), Gaps = 94/762 (12%)

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF-- 116
           A++ A  +   L  A  LFDEM   + V WN LI+A  R GL E A  ++  M + G   
Sbjct: 111 AVMDAYGRFGSLADALLLFDEMARPDAVCWNILITACSRRGLFEDAFILFRSMLSCGVGQ 170

Query: 117 -VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
            +PT +T+A +  A      ++ GR  H  V+K GL+ +    NAL+S+YAKCG ++  V
Sbjct: 171 GMPTAVTVAVIVPACAKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMV 230

Query: 176 PV---FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
                F  +   + V++ ++++G  +     EAL +F  MI +    +  +++S+L VC 
Sbjct: 231 DAHRAFSSIRCKDVVSWNSVIAGYIENQLFGEALALFSQMISQGYLPNYSTVASILPVC- 289

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                        S  +F R+ HG++VH   ++ G E D+ +SN+L+  Y+K  +M   E
Sbjct: 290 -------------SFTEFGRH-HGKEVHSFVVRHGMEIDVSVSNALMTHYSKVLEMKDVE 335

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            IF+++  R +VSWN +IAGY       +A+ L Q + S G  PD V+ I++L AC + G
Sbjct: 336 SIFTSMDVRDIVSWNTIIAGYVMNGYHHRALGLFQGLLSTGIAPDSVSFISLLTACAQVG 395

Query: 353 DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
           D+KTG E+                                   F  + +    SWNA+LS
Sbjct: 396 DVKTGMEVHGYIFQRPVLQETSLMNALVTFYSHCDRFDDAFRAFTDILNKDSISWNAILS 455

Query: 378 SYSQSENHKEAIKLFREMQFRGVKP---DRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           + + SE H E   +      RGV     D  T+  ++      GI +  ++ H  SL+  
Sbjct: 456 ACATSEQHIEKFFVLMSEMCRGVNQCQWDSVTVLNVIHMSTFCGI-KMVREAHGWSLRVG 514

Query: 435 SHIDNYVASGLIGIYSKCQ--------------RN-----------------ELAERVFH 463
              +  VA+ ++  Y KC               RN                 E AE +F+
Sbjct: 515 YTGETSVANAILDAYVKCGYSHDASILFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFN 574

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            + E D+  WN MI   + N +D +AF  F  ++   + P   S A +L +C  L S   
Sbjct: 575 HMAEKDLTSWNLMIQLYAQNDMDGQAFSLFNHLQSEGLKPDIVSIANILEACIHLCSVQL 634

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
            RQ HA + +   + DI +  AL++ Y KCG+I  A   F +   K+ VT+  MI  YA 
Sbjct: 635 VRQCHAYMLR-ASLEDIHLEGALVDAYSKCGNITNAYNIFQISPKKDLVTFTAMIGCYAM 693

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
           +G  +EAV L+  M+   ++PD +    +L+ACSH+GLVD G++IF S++  H V P  +
Sbjct: 694 HGMAEEAVELFSKMLKLDIRPDHVVLTTLLSACSHAGLVDAGIKIFKSIREIHRVVPTAE 753

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKD-DPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           HY CM+D L R+GH  +A M   +MP    +   W  LL +C++H  V + + AA  LF 
Sbjct: 754 HYACMVDLLARSGHIQDAYMFALDMPPHAVNANAWSSLLGACKVHGKVEIGQLAAGRLFS 813

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           ++  +   Y +++NIY++  +WD +  VR+LM ++  +K PA
Sbjct: 814 MEGGDIGNYVIMSNIYAADEKWDGVENVRKLM-KSIDMKKPA 854



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 185/733 (25%), Positives = 312/733 (42%), Gaps = 138/733 (18%)

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHG-RRC-HGLVIKIG-LDKNIYVANALLSLYAK 167
           M  EG  P  + LA+  ++S+AL        RC HGL +K G +  +  VA A++  Y +
Sbjct: 59  MLGEGHRPGALELAAAIRSSSALPGSGSALARCLHGLAVKAGRVASSATVAKAVMDAYGR 118

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS---IDSVSL 224
            G    A+ +F+EM+ P+ V +  +++  ++     +A  +FR M+   V      +V++
Sbjct: 119 FGSLADALLLFDEMARPDAVCWNILITACSRRGLFEDAFILFRSMLSCGVGQGMPTAVTV 178

Query: 225 SSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK 284
           + ++  CA                K+     G+ VHC  +K G E+D    N+L+ MYAK
Sbjct: 179 AVIVPACA----------------KWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAK 222

Query: 285 NGD---MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
            G    M  A   FS++  + VVSWN +IAGY +     +A+ L  +M S G+ P+  T 
Sbjct: 223 CGGSRVMVDAHRAFSSIRCKDVVSWNSVIAGYIENQLFGEALALFSQMISQGYLPNYSTV 282

Query: 342 INMLVAC-----------------VRSG-------------------DIKTGREMFDSMP 365
            ++L  C                 VR G                   ++K    +F SM 
Sbjct: 283 ASILPVCSFTEFGRHHGKEVHSFVVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMD 342

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
              + SWN +++ Y  +  H  A+ LF+ +   G+ PD  +   +L++CA +G +++G +
Sbjct: 343 VRDIVSWNTIIAGYVMNGYHHRALGLFQGLLSTGIAPDSVSFISLLTACAQVGDVKTGME 402

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           VH    +     +  + + L+  YS C R + A R F  I   D + WN++++  + +  
Sbjct: 403 VHGYIFQRPVLQETSLMNALVTFYSHCDRFDDAFRAFTDILNKDSISWNAILSACATSEQ 462

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG----RQVHAQIEKDGYVNDIF 541
            IE F          +   Q+   TVL+      S+F G    R+ H    + GY  +  
Sbjct: 463 HIEKFFVLMSEMCRGVNQCQWDSVTVLNVIHM--STFCGIKMVREAHGWSLRVGYTGETS 520

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVT---------------------------- 573
           V +A+++ Y KCG  + A   F    G+N VT                            
Sbjct: 521 VANAILDAYVKCGYSHDASILFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKD 580

Query: 574 ---WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH------------ 618
              WN MI  YAQN    +A  L+  + + G+KPD ++   IL AC H            
Sbjct: 581 LTSWNLMIQLYAQNDMDGQAFSLFNHLQSEGLKPDIVSIANILEACIHLCSVQLVRQCHA 640

Query: 619 ----SGLVDVGVE------------IFNSMQLDHGVEPILD--HYTCMIDCLGRAGHFHE 660
               + L D+ +E            I N+  +   + P  D   +T MI C    G   E
Sbjct: 641 YMLRASLEDIHLEGALVDAYSKCGNITNAYNIFQ-ISPKKDLVTFTAMIGCYAMHGMAEE 699

Query: 661 AEMLIDEM---PCKDDPVIWEVLLSSCR----LHANVRLAKRAAEELFRLDPKNSAPYSL 713
           A  L  +M     + D V+   LLS+C     + A +++ K +  E+ R+ P  +  Y+ 
Sbjct: 700 AVELFSKMLKLDIRPDHVVLTTLLSACSHAGLVDAGIKIFK-SIREIHRVVP-TAEHYAC 757

Query: 714 LANIYSSLGRWDD 726
           + ++ +  G   D
Sbjct: 758 MVDLLARSGHIQD 770



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 148/661 (22%), Positives = 274/661 (41%), Gaps = 132/661 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTH---SAQHLFDKMPHKDIYSWNAILSA 63
           G+ +H ++++ GL  DT   N L+ +Y+KC  +     A   F  +  KD+ SWN++   
Sbjct: 194 GRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVDAHRAFSSIRCKDVVSWNSV--- 250

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                                       I+  + N L  +AL+++++M ++G++P + T+
Sbjct: 251 ----------------------------IAGYIENQLFGEALALFSQMISQGYLPNYSTV 282

Query: 124 ASVFKA-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           AS+    S       HG+  H  V++ G++ ++ V+NAL++ Y+K    K    +F  M 
Sbjct: 283 ASILPVCSFTEFGRHHGKEVHSFVVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMD 342

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + V++  +++G         AL +F+ ++   ++ DSVS  S+L  CA+ G       
Sbjct: 343 VRDIVSWNTIIAGYVMNGYHHRALGLFQGLLSTGIAPDSVSFISLLTACAQVG------- 395

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
               D K    VHG       ++     +  L N+L+  Y+     D A   F+++  + 
Sbjct: 396 ----DVKTGMEVHGYIFQRPVLQ-----ETSLMNALVTFYSHCDRFDDAFRAFTDILNKD 446

Query: 303 VVSWNVMIAGYGQKYQSTKAI-----ELLQRMKSCGFEPDEVTSIN-------------- 343
            +SWN +++      Q  +       E+ + +  C  + D VT +N              
Sbjct: 447 SISWNAILSACATSEQHIEKFFVLMSEMCRGVNQC--QWDSVTVLNVIHMSTFCGIKMVR 504

Query: 344 --------------------MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                               +L A V+ G       +F +    ++ + N M+S Y +S 
Sbjct: 505 EAHGWSLRVGYTGETSVANAILDAYVKCGYSHDASILFRNHAGRNIVTDNIMISCYLKSN 564

Query: 384 ---------NH----------------------KEAIKLFREMQFRGVKPDRTTLAIILS 412
                    NH                       +A  LF  +Q  G+KPD  ++A IL 
Sbjct: 565 CIEDAEVIFNHMAEKDLTSWNLMIQLYAQNDMDGQAFSLFNHLQSEGLKPDIVSIANILE 624

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +C  +  ++  +Q HA  L+ AS  D ++   L+  YSKC     A  +F   P+ D+V 
Sbjct: 625 ACIHLCSVQLVRQCHAYMLR-ASLEDIHLEGALVDAYSKCGNITNAYNIFQISPKKDLVT 683

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI- 531
           + +MI   +++ +  EA   F +M + ++ P      T+LS+C+       G ++   I 
Sbjct: 684 FTAMIGCYAMHGMAEEAVELFSKMLKLDIRPDHVVLTTLLSACSHAGLVDAGIKIFKSIR 743

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQF-FDM-MHGKNTVTWNEM-----IHGYAQN 584
           E    V      + ++++  + G I  A  F  DM  H  N   W+ +     +HG  + 
Sbjct: 744 EIHRVVPTAEHYACMVDLLARSGHIQDAYMFALDMPPHAVNANAWSSLLGACKVHGKVEI 803

Query: 585 G 585
           G
Sbjct: 804 G 804



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 215/493 (43%), Gaps = 71/493 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H +I +  +  +T L N L+  YS C+    A   F  + +KD  SWNAILSA   
Sbjct: 400 GMEVHGYIFQRPVLQETSLMNALVTFYSHCDRFDDAFRAFTDILNKDSISWNAILSACAT 459

Query: 67  SDD-LEFAYKLFDEMPER-NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
           S+  +E  + L  EM    N   W++                              +T+ 
Sbjct: 460 SEQHIEKFFVLMSEMCRGVNQCQWDS------------------------------VTVL 489

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +V   ST    ++  R  HG  +++G      VANA+L  Y KCG++  A  +F   +  
Sbjct: 490 NVIHMST-FCGIKMVREAHGWSLRVGYTGETSVANAILDAYVKCGYSHDASILFRNHAGR 548

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR----------- 233
           N VT   M+S   K++ + +A  +F  M  K    D  S + ++ + A+           
Sbjct: 549 NIVTDNIMISCYLKSNCIEDAEVIFNHMAEK----DLTSWNLMIQLYAQNDMDGQAFSLF 604

Query: 234 ---EGCGVESDVFAQSDNKFSRNVH------GQQVHCLTIKLGFEADLHLSNSLLDMYAK 284
              +  G++ D+ + + N     +H       +Q H   ++   E D+HL  +L+D Y+K
Sbjct: 605 NHLQSEGLKPDIVSIA-NILEACIHLCSVQLVRQCHAYMLRASLE-DIHLEGALVDAYSK 662

Query: 285 NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
            G++ +A  IF   P++ +V++  MI  Y     + +A+EL  +M      PD V    +
Sbjct: 663 CGNITNAYNIFQISPKKDLVTFTAMIGCYAMHGMAEEAVELFSKMLKLDIRPDHVVLTTL 722

Query: 345 LVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           L AC  +G +  G ++F S+       P+   +  M+   ++S + ++A     +M    
Sbjct: 723 LSACSHAGLVDAGIKIFKSIREIHRVVPTAEHYACMVDLLARSGHIQDAYMFALDMPPHA 782

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKT--ASHIDNYVASGLIGIYSKCQRNEL 457
           V  +    + +L +C   G +E G Q+ A  L +     I NYV   +  IY+  ++ + 
Sbjct: 783 VNAN--AWSSLLGACKVHGKVEIG-QLAAGRLFSMEGGDIGNYVI--MSNIYAADEKWDG 837

Query: 458 AERVFHRIPELDI 470
            E V   +  +D+
Sbjct: 838 VENVRKLMKSIDM 850


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 219/701 (31%), Positives = 362/701 (51%), Gaps = 60/701 (8%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLASVFKASTALLDVEHGRRCHGL 145
           S N  I++L +  L  +A+  +  +  + GF  T  T A +  A + L  +EHG++ H  
Sbjct: 29  SSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDH 88

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
           ++K     ++ + N +L++Y KC   K A  VF+ M E N V++T++++G ++  +   A
Sbjct: 89  MLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNA 148

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           LE +  M++  V  D  +  S++  C+  G     D+             G+Q+H   +K
Sbjct: 149 LEFYFQMLQSGVMPDQFTFGSIIKACSSLG-----DIGL-----------GRQLHAHVLK 192

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
             F A +   N+L+ MY K+  +  A  +FS +  R ++SW  MIAG+ Q     +A+  
Sbjct: 193 SEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCY 252

Query: 326 LQRMKSCG-FEPDEVTSINMLVAC-----------------------------------V 349
            + M   G + P+E    ++  AC                                    
Sbjct: 253 FKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYA 312

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           + G +   R +F  +  P + +WNA+++ ++   + KEAI  F +M+ +G+ PD  T+  
Sbjct: 313 KCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRS 372

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL- 468
           +L +C +   L  G QVH    K    +D  V + L+ +Y+KC  +EL + +F    E+ 
Sbjct: 373 LLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKC--SELRDAIFF-FEEMR 429

Query: 469 ---DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
              D+V WN+++     +    E F   K M  ++  P   +   VL + A+  S   G 
Sbjct: 430 CNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGN 489

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           QVH    K G   D  V + LI++Y KCG +  A + FD M   + V+W+ +I GYAQ G
Sbjct: 490 QVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFG 549

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
           YG+EA++L+K M    VKP+ +TFV +LTACSH GLV+ G +++ +M+ + G+ P  +H 
Sbjct: 550 YGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHC 609

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
           +CM+D L RAG  +EAE  I +M    D V+W+ LL++C+ H NV + KRAAE + ++DP
Sbjct: 610 SCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDP 669

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            NSA + LL NIY+S G W+D+  +R LM +  + K P  S
Sbjct: 670 SNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQS 710



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 173/619 (27%), Positives = 285/619 (46%), Gaps = 86/619 (13%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
           H+     H D+   N IL+   K   L+ A K+FD MPERNVVSW ++I+   +NG    
Sbjct: 88  HMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGN 147

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           AL  Y +M   G +P   T  S+ KA ++L D+  GR+ H  V+K     +I   NAL+S
Sbjct: 148 ALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALIS 207

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI-DSV 222
           +Y K      A+ VF  M+  + +++ +M++G ++    +EAL  F+ M+ + V + +  
Sbjct: 208 MYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEF 267

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
              SV   C+                   +  +G+Q+H ++IK G   D+    SL DMY
Sbjct: 268 IFGSVFSACS----------------SLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMY 311

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           AK G +  A V+F  +    +V+WN +IAG+     + +AI    +M+  G  PDE+T  
Sbjct: 312 AKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVR 371

Query: 343 NMLVACVRSGDIKTGREM-----------------------------------FDSMP-S 366
           ++L AC    ++  G ++                                   F+ M  +
Sbjct: 372 SLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCN 431

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
             + SWNA+L++  + +  +E  +L + M     +PD  TL  +L + A    +E G QV
Sbjct: 432 ADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQV 491

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H  +LKT  + D  V +GLI +Y+KC   + A ++F  +   D+V W+S+I G +     
Sbjct: 492 HCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYG 551

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
            EA   FK MR+ ++ P   +F  VL++C+ +    +G +++  +EK+        G A 
Sbjct: 552 EEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKE-------FGIAP 604

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
              +C C                       M+   A+ G  +EA      M      PD 
Sbjct: 605 TREHCSC-----------------------MVDLLARAGCLNEAEGFIHQM---AFDPDI 638

Query: 607 ITFVAILTACSHSGLVDVG 625
           + +  +L AC   G VDVG
Sbjct: 639 VVWKTLLAACKTHGNVDVG 657



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 213/442 (48%), Gaps = 61/442 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH   ++ GL  D F    L ++Y+KC     A+ +F ++   D+            
Sbjct: 285 GRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDL------------ 332

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                              V+WN +I+     G  ++A++ +++M ++G +P  IT+ S+
Sbjct: 333 -------------------VAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSL 373

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EPN 185
             A T+  ++  G + HG + K+GLD ++ V N LL++YAKC   + A+  FEEM    +
Sbjct: 374 LCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNAD 433

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ A+++   + D+  E   + +LM       D ++L++VLG  A E   +E      
Sbjct: 434 LVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASA-ETVSIEI----- 487

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G QVHC  +K G   D  ++N L+D+YAK G + +A  IF ++    VVS
Sbjct: 488 ----------GNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVS 537

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W+ +I GY Q     +A++L + M+    +P+ VT + +L AC   G ++ G +++ +M 
Sbjct: 538 WSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTME 597

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                +P+    + M+   +++    EA     +M F    PD      +L++C   G +
Sbjct: 598 KEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAF---DPDIVVWKTLLAACKTHGNV 654

Query: 421 ESGKQVHAASLK-----TASHI 437
           + GK+     LK     +A+H+
Sbjct: 655 DVGKRAAENILKIDPSNSAAHV 676


>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Cucumis sativus]
          Length = 664

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 228/730 (31%), Positives = 359/730 (49%), Gaps = 142/730 (19%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N+ I    +    + A+ LFD   H +  +WN +++A  K  ++  A +LF+EMP R++V
Sbjct: 61  NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIV 120

Query: 87  SWNNLISALVRNG--LEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
           SWN ++S  +  G    E+A +++++M     V                           
Sbjct: 121 SWNLMLSGYISCGGKFVERARNMFDQMPETDCVSW------------------------- 155

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
                         N +LS YAK G    A  +F EM E N V++ AM+SG      V +
Sbjct: 156 --------------NTMLSGYAKSGMMDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEK 201

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           A+E F+LM ++    DS SL +++         +++D   +++                 
Sbjct: 202 AIEFFKLMPKR----DSASLRALISGL------IQNDKLVEAER---------------- 235

Query: 265 KLGFEADLHLSNSLLDMYAKN---GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
                        +L  Y  N   GD+              V ++N +IAGYGQK  + +
Sbjct: 236 -------------ILLQYGGNVGKGDL--------------VDAYNTLIAGYGQKGMAYE 268

Query: 322 AIELLQRMK---SCGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
           A +L  R+     CG+    V S N ++ C VR+GDI + RE+FD M      SWN M+S
Sbjct: 269 ARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMIS 328

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y Q  + KEA  LF  M     +PD  +  +++S  + +G L+                
Sbjct: 329 GYVQILDMKEASNLFSRMP----EPDTLSWNMMISGFSEIGSLK---------------- 368

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
                              LA  +F RIPE  +V WNSMI+G   N     A   F QM+
Sbjct: 369 -------------------LAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQ 409

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
                P + + +++LS+CA L     G Q+H  + K  ++ D+ + ++L+ MY +CG I 
Sbjct: 410 LEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTK-AFIADLPINNSLVTMYSRCGAIV 468

Query: 558 GARQFFDMMH-GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
            AR  FD M+  ++ ++WN MI GYA +G+  EA++L+  M    V+P  ITF+++L AC
Sbjct: 469 EARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNAC 528

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           +H+GL++ G   FNSM   HG++P ++HY  ++D +GR G   EA  LI+ MPC+ D  +
Sbjct: 529 AHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAV 588

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W  LL +C++H NV +A+ AAE L +L P++SAPY LL N+Y+ +GRWDD   +R +M +
Sbjct: 589 WGALLGACKVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEK 648

Query: 737 NCIVKDPAYS 746
           N + KD  YS
Sbjct: 649 NNVQKDAGYS 658



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 161/577 (27%), Positives = 281/577 (48%), Gaps = 83/577 (14%)

Query: 12  AHILRNG-------LFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           ++++R G       LFD     +T   NR+I  Y K      A+ LF++MP++DI SWN 
Sbjct: 65  SYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIVSWNL 124

Query: 60  ILSA--QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +LS    C    +E A  +FD+MPE + VSWN ++S   ++G+ +KA  ++N+M      
Sbjct: 125 MLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMP----- 179

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
                                             ++N+   NA++S Y   G  + A+  
Sbjct: 180 ----------------------------------ERNVVSWNAMVSGYLMNGHVEKAIEF 205

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSL----SSVLGVCAR 233
           F+ M + +  +  A++SGL + D++VEA    R++++   ++    L    ++++    +
Sbjct: 206 FKLMPKRDSASLRALISGLIQNDKLVEAE---RILLQYGGNVGKGDLVDAYNTLIAGYGQ 262

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS-NSLLDMYAKNGDMDSAE 292
           +G   E           +R +  +   C     G+     +S NS++  Y + GD+ SA 
Sbjct: 263 KGMAYE-----------ARKLFDRIPLC--CDCGYSRRNVISWNSMIMCYVRAGDIVSAR 309

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  + ER   SWN MI+GY Q     +A  L  RM     EPD ++   M+      G
Sbjct: 310 ELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMP----EPDTLSWNMMISGFSEIG 365

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            +K   ++F  +P  S+ SWN+M+S Y ++E++K A+ +F +MQ  G KPDR TL+ ILS
Sbjct: 366 SLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILS 425

Query: 413 SCAAMGILESGKQVHAASLKTASHI-DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDI 470
           +CA +  L  G Q+H   L T + I D  + + L+ +YS+C     A  VF  +  + D+
Sbjct: 426 ACAGLVDLVLGTQIH--QLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDV 483

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHA 529
           + WN+MI G + +    EA   F  M+Q  + P+  +F +VL++CA      +G R+ ++
Sbjct: 484 ISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNS 543

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
            +   G    +   +AL+++  + G +  A    + M
Sbjct: 544 MVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSM 580



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 161/310 (51%), Gaps = 19/310 (6%)

Query: 6   AGKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           AG ++ A  L + + + DTF  N +I  Y +  +   A +LF +MP  D  SWN ++S  
Sbjct: 302 AGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGF 361

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +   L+ A+ LF  +PE+++VSWN++IS   +N   + A++++ +M  EG  P   TL+
Sbjct: 362 SEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLS 421

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-E 183
           S+  A   L+D+  G + H LV K     ++ + N+L+++Y++CG    A  VF+EM+ +
Sbjct: 422 SILSACAGLVDLVLGTQIHQLVTK-AFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQ 480

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + +++ AM+ G A      EAL++F LM +  V    ++  SVL  CA  G      + 
Sbjct: 481 RDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAG------LI 534

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERS 302
            +   +F+  V+           G +  +    +L+D+  ++G ++ A  + +++P E  
Sbjct: 535 EEGRREFNSMVNTH---------GIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPD 585

Query: 303 VVSWNVMIAG 312
              W  ++  
Sbjct: 586 KAVWGALLGA 595


>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial; Flags: Precursor
 gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
 gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 787

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 241/777 (31%), Positives = 393/777 (50%), Gaps = 92/777 (11%)

Query: 10  LHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           LHAH+L  G L  D     +LIE Y+   +  S++ +F+  P+ D + +  ++  +C   
Sbjct: 20  LHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLI--KC--- 74

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
                          NV  W +L+ A         A+ +Y+++ +E    +     SV +
Sbjct: 75  ---------------NV--WCHLLDA---------AIDLYHRLVSETTQISKFVFPSVLR 108

Query: 129 ASTALLDVEH---GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           A       EH   G + HG +IK G+D +  +  +LL +Y + G    A  VF+ M   +
Sbjct: 109 ACAG--SREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRD 166

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V ++ ++S   +   VV+AL MF+ M+   V  D+V++ SV+  CA  GC         
Sbjct: 167 LVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC--------- 217

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
              + +R+VHGQ    +T K+ F+ D  L NSLL MY+K GD+ S+E IF  + +++ VS
Sbjct: 218 --LRIARSVHGQ----ITRKM-FDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG-------- 357
           W  MI+ Y +   S KA+     M   G EP+ VT  ++L +C   G I+ G        
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330

Query: 358 -REMFDSMPSPSVS---------------------------SWNAMLSSYSQSENHKEAI 389
            RE+  +  S S++                           +WN+++S Y+      +A+
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LFR+M  + +KPD  TLA  +S+C   G++  GKQ+H   ++T    D +V + LI +Y
Sbjct: 391 GLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMY 449

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           SK    + A  VF++I    +V WNSM+ G S N   +EA   F  M  + +   + +F 
Sbjct: 450 SKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFL 509

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
            V+ +C+ + S  +G+ VH ++   G + D+F  +ALI+MY KCGD+  A   F  M  +
Sbjct: 510 AVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAETVFRAMSSR 568

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + V+W+ MI+ Y  +G    A+  +  M+ SG KP+++ F+ +L+AC HSG V+ G   F
Sbjct: 569 SIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF 628

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           N M+   GV P  +H+ C ID L R+G   EA   I EMP   D  +W  L++ CR+H  
Sbjct: 629 NLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQK 687

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + + K    +L  +   ++  Y+LL+NIY+  G W++ R +R  M  + + K P YS
Sbjct: 688 MDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYS 744


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 200/596 (33%), Positives = 315/596 (52%), Gaps = 52/596 (8%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D N++  NALLS  A          +F  M E + V++ A+++G + T     +++++R 
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 212 MIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
           ++R+ +V    ++LS+++ V +           A SD        G  VHC  ++LGF A
Sbjct: 136 LLREESVRPTRITLSAMIMVAS-----------ALSDRAL-----GHSVHCQVLRLGFGA 179

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
              + + L+DMYAK G +  A  +F  +  ++VV +N +I G                  
Sbjct: 180 YAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGL----------------- 222

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                             +R   I+  + +F  M      +W  M++  +Q+    EA+ 
Sbjct: 223 ------------------LRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALD 264

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +FR M+  GV  D+ T   IL++C A+   E GKQ+HA   +T    + +V S L+ +YS
Sbjct: 265 VFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYS 324

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC+   LAE VF R+   +I+ W +MI G   N+   EA   F +M+ + + P  F+  +
Sbjct: 325 KCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGS 384

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           V+SSCA L+S  +G Q H      G +  I V +AL+ +Y KCG I  A + FD M   +
Sbjct: 385 VISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHD 444

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+W  ++ GYAQ G   E + L++ M+ +G+KPD +TF+ +L+ACS +GLV+ G + F+
Sbjct: 445 QVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFD 504

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SMQ DH + PI DHYTCMID   R+G F EAE  I +MP   D   W  LLSSCRL  N+
Sbjct: 505 SMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNM 564

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + K AAE L   DP+N A Y LL +++++ G+W ++  +R  M +  + K+P  S
Sbjct: 565 EIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCS 620



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 254/551 (46%), Gaps = 91/551 (16%)

Query: 5   VAGKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           VAG + H  IL+  L    TFL N L+  Y+K      A+ +FD+MP  ++++ NA+LSA
Sbjct: 30  VAGAV-HCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSA 88

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHIT 122
              S  +    +LF  MPER+ VS+N LI+     G   +++ +Y  +  E  V PT IT
Sbjct: 89  LAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRIT 148

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L+++   ++AL D   G   H  V+++G     +V + L+ +YAK G  + A  VF+EM 
Sbjct: 149 LSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEME 208

Query: 183 -------------------------------EPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
                                          + + +T+T M++GL +    +EAL++FR 
Sbjct: 209 AKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRR 268

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M  + V ID  +  S+L  C            A S+        G+Q+H    +  +E +
Sbjct: 269 MRAEGVGIDQYTFGSILTACG---------ALAASEE-------GKQIHAYITRTWYEDN 312

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + + ++L+DMY+K   +  AE +F  +  R+++SW  MI GYGQ   S +A+     M+ 
Sbjct: 313 VFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQM 372

Query: 332 CGFEPDEVTSINMLVACV-----------------------------------RSGDIKT 356
            G +PD+ T  +++ +C                                    + G I+ 
Sbjct: 373 DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIED 432

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
              +FD M      SW A+++ Y+Q    KE I LF +M   G+KPD  T   +LS+C+ 
Sbjct: 433 AHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSR 492

Query: 417 MGILESGKQVHAASLKTASHI---DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVC 472
            G++E G     +  K    +   D+Y    +I +YS+  R + AE    ++P   D   
Sbjct: 493 AGLVEKGCDYFDSMQKDHDIVPIDDHYTC--MIDLYSRSGRFKEAEEFIKQMPHSPDAFG 550

Query: 473 WNSMIAGLSLN 483
           W ++++   L 
Sbjct: 551 WATLLSSCRLR 561



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 213/432 (49%), Gaps = 24/432 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +LR G     F+ + L+++Y+K      A+ +F +M  K +  +N +++   +
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A  LF  M +R+ ++W  +++ L +NGL+ +AL V+ +M  EG      T  S+
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  AL   E G++ H  + +   + N++V +AL+ +Y+KC   + A  VF  M+  N 
Sbjct: 285 LTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TAM+ G  +     EA+  F  M    +  D  +L SV+  CA      E       
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEE------- 397

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q HCL +  G    + +SN+L+ +Y K G ++ A  +F  +     VSW
Sbjct: 398 ---------GAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 448

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             ++ GY Q  ++ + I+L ++M   G +PD VT I +L AC R+G ++ G + FDSM  
Sbjct: 449 TALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQK 508

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  M+  YS+S   KEA +  ++M      PD    A +LSSC   G +E
Sbjct: 509 DHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPH---SPDAFGWATLLSSCRLRGNME 565

Query: 422 SGKQVHAASLKT 433
            GK      L+T
Sbjct: 566 IGKWAAENLLET 577



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 4/109 (3%)

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           F+ + L+  Y K G +  AR+ FD M   N  T N ++   A +    +  RL+    AS
Sbjct: 49  FLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLF----AS 104

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
             + D +++ A++T  S +G     V+++ ++  +  V P     + MI
Sbjct: 105 MPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153


>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Cucumis sativus]
          Length = 664

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 228/730 (31%), Positives = 359/730 (49%), Gaps = 142/730 (19%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N+ I    +    + A+ LFD   H +  +WN +++A  K  ++  A +LF+EMP R++V
Sbjct: 61  NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIV 120

Query: 87  SWNNLISALVRNG--LEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
           SWN ++S  +  G    E+A +++++M     V                           
Sbjct: 121 SWNLMLSGYISCGGKFVERARNMFDQMPETDCVSW------------------------- 155

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
                         N +LS YAK G    A  +F EM E N V++ AM+SG      V +
Sbjct: 156 --------------NTMLSGYAKSGTMDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEK 201

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           A+E F+LM ++    DS SL +++         +++D   +++                 
Sbjct: 202 AIEFFKLMPKR----DSASLRALVSGL------IQNDKLVEAER---------------- 235

Query: 265 KLGFEADLHLSNSLLDMYAKN---GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
                        +L  Y  N   GD+              V ++N +IAGYGQK  + +
Sbjct: 236 -------------ILLQYGGNVGKGDL--------------VDAYNTLIAGYGQKGMAYE 268

Query: 322 AIELLQRMK---SCGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
           A +L  R+     CG+    V S N ++ C VR+GDI + RE+FD M      SWN M+S
Sbjct: 269 ARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMIS 328

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y Q  + KEA  LF  M     +PD  +  +++S  + +G L+                
Sbjct: 329 GYVQILDMKEASNLFSRMP----EPDTLSWNMMISGFSEIGSLK---------------- 368

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
                              LA  +F RIPE  +V WNSMI+G   N     A   F QM+
Sbjct: 369 -------------------LAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQ 409

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
                P + + +++LS+CA L     G Q+H  + K  ++ D+ + ++L+ MY +CG I 
Sbjct: 410 LEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTK-AFIADLPINNSLVTMYSRCGAIV 468

Query: 558 GARQFFDMMH-GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
            AR  FD M+  ++ ++WN MI GYA +G+  EA++L+  M    V+P  ITF+++L AC
Sbjct: 469 EARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNAC 528

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           +H+GL++ G   FNSM   HG++P ++HY  ++D +GR G   EA  LI+ MPC+ D  +
Sbjct: 529 AHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAV 588

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W  LL +C++H NV +A+ AAE L +L P++SAPY LL N+Y+ +GRWDD   +R +M +
Sbjct: 589 WGALLGACKVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEK 648

Query: 737 NCIVKDPAYS 746
           N + KD  YS
Sbjct: 649 NNVQKDAGYS 658



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 161/577 (27%), Positives = 280/577 (48%), Gaps = 83/577 (14%)

Query: 12  AHILRNG-------LFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           ++++R G       LFD     +T   NR+I  Y K      A+ LF++MP++DI SWN 
Sbjct: 65  SYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIVSWNL 124

Query: 60  ILSA--QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +LS    C    +E A  +FD+MPE + VSWN ++S   ++G  +KA  ++N+M      
Sbjct: 125 MLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEMP----- 179

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
                                             ++N+   NA++S Y   G  + A+  
Sbjct: 180 ----------------------------------ERNVVSWNAMVSGYLMNGHVEKAIEF 205

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSL----SSVLGVCAR 233
           F+ M + +  +  A++SGL + D++VEA    R++++   ++    L    ++++    +
Sbjct: 206 FKLMPKRDSASLRALVSGLIQNDKLVEAE---RILLQYGGNVGKGDLVDAYNTLIAGYGQ 262

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS-NSLLDMYAKNGDMDSAE 292
           +G   E           +R +  +   C     G+     +S NS++  Y + GD+ SA 
Sbjct: 263 KGMAYE-----------ARKLFDRIPLC--CDCGYSRRNVISWNSMIMCYVRAGDIVSAR 309

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  + ER   SWN MI+GY Q     +A  L  RM     EPD ++   M+      G
Sbjct: 310 ELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMP----EPDTLSWNMMISGFSEIG 365

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            +K   ++F  +P  S+ SWN+M+S Y ++E++K A+ +F +MQ  G KPDR TL+ ILS
Sbjct: 366 SLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILS 425

Query: 413 SCAAMGILESGKQVHAASLKTASHI-DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDI 470
           +CA +  L  G Q+H   L T + I D  + + L+ +YS+C     A  VF  +  + D+
Sbjct: 426 ACAGLVDLVLGTQIH--QLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDV 483

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHA 529
           + WN+MI G + +    EA   F  M+Q  + P+  +F +VL++CA      +G R+ ++
Sbjct: 484 ISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNS 543

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
            +   G    +   +AL+++  + G +  A    + M
Sbjct: 544 MVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSM 580



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 161/310 (51%), Gaps = 19/310 (6%)

Query: 6   AGKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           AG ++ A  L + + + DTF  N +I  Y +  +   A +LF +MP  D  SWN ++S  
Sbjct: 302 AGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGF 361

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +   L+ A+ LF  +PE+++VSWN++IS   +N   + A++++ +M  EG  P   TL+
Sbjct: 362 SEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLS 421

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-E 183
           S+  A   L+D+  G + H LV K     ++ + N+L+++Y++CG    A  VF+EM+ +
Sbjct: 422 SILSACAGLVDLVLGTQIHQLVTK-AFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQ 480

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + +++ AM+ G A      EAL++F LM +  V    ++  SVL  CA  G      + 
Sbjct: 481 RDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAG------LI 534

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERS 302
            +   +F+  V+           G +  +    +L+D+  ++G ++ A  + +++P E  
Sbjct: 535 EEGRREFNSMVNTH---------GIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPD 585

Query: 303 VVSWNVMIAG 312
              W  ++  
Sbjct: 586 KAVWGALLGA 595


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 216/668 (32%), Positives = 332/668 (49%), Gaps = 58/668 (8%)

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           +T   + + ST    + HG+  H  +IK      +++ N LL +Y KCG T  A  +F+ 
Sbjct: 20  VTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDR 79

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M + N V++ +++SG  +     E + +F+      + +D  + S+ L VC R       
Sbjct: 80  MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR------- 132

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                 D +      G+ +H L    G    + L+NSL+DMY K G +D A ++F +  E
Sbjct: 133 ----TLDLRL-----GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADE 183

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRM----------------KSC------------ 332
              VSWN +IAGY +   + + + LL +M                K+C            
Sbjct: 184 LDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGK 243

Query: 333 ---------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                    G + D V    +L    + GD++   ++F  MP P+V  +NAM++ + Q E
Sbjct: 244 MLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQME 303

Query: 384 N-----HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
                   EA+ LF EMQ RG+KP   T + IL +C+ +   E GKQ+HA   K     D
Sbjct: 304 TMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSD 363

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
            ++ + L+ +YS     E   + FH  P+LD+V W S+I G   N         F ++  
Sbjct: 364 EFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLF 423

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
           +   P +F+ + +LS+CA L++   G Q+HA   K G  N   + ++ I MY KCGDI  
Sbjct: 424 SGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDS 483

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A   F      + V+W+ MI   AQ+G   EAV L++ M  SG+ P+ ITF+ +L ACSH
Sbjct: 484 ANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSH 543

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
            GLV+ G+  F  M+ DHG+ P + H  C++D LGRAG   EAE  I +   + DPV+W 
Sbjct: 544 GGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWR 603

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC 738
            LLS+CR+H      KR AE +  L+P+ +A Y LL NIY+  G       +R LM +  
Sbjct: 604 SLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRG 663

Query: 739 IVKDPAYS 746
           + K+P  S
Sbjct: 664 VKKEPGLS 671



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 180/684 (26%), Positives = 311/684 (45%), Gaps = 95/684 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GKL H H+++       FL N L+ +Y KC  T                         
Sbjct: 36  IHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGET------------------------- 70

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                 + A KLFD MP+RNVVSWN+LIS   + G   + ++++ +           T +
Sbjct: 71  ------DVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFS 124

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +        LD+  GR  H L+   GL   + + N+L+ +Y KCG    A  VFE   E 
Sbjct: 125 NALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADEL 184

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ ++++G  +     E L +   M+R  ++++S +L S L  C             
Sbjct: 185 DSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACG------------ 232

Query: 245 QSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
              + FS ++  G+ +H   +KLG + D+ +  +LLD YAK GD++ A  IF  +P+ +V
Sbjct: 233 ---SNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNV 289

Query: 304 VSWNVMIAGYGQKYQ-----STKAIELLQRMKSCGFEPDEVTSINMLVACVR-------- 350
           V +N MIAG+ Q        + +A+ L   M+S G +P E T  ++L AC          
Sbjct: 290 VMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGK 349

Query: 351 ---------------------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                      SG I+ G + F S P   V SW +++  + Q+ 
Sbjct: 350 QIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNG 409

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
             +  + LF E+ F G KPD  T++I+LS+CA +  ++SG+Q+HA ++KT       + +
Sbjct: 410 QFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQN 469

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
             I +Y+KC   + A   F      DIV W+ MI+  + +    EA   F+ M+ + + P
Sbjct: 470 SQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAP 529

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQF 562
              +F  VL +C+      +G +    ++KD G   ++   + ++++  + G +  A  F
Sbjct: 530 NHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESF 589

Query: 563 F-DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD-DITFVAILTACSHSG 620
             D     + V W  ++     +   D   R+ + +I   ++P+   ++V +    + +G
Sbjct: 590 IMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIE--LEPEAAASYVLLYNIYNDAG 647

Query: 621 LVDVGVEIFNSMQLDHGV--EPIL 642
           +     EI N M+ D GV  EP L
Sbjct: 648 IQMPATEIRNLMK-DRGVKKEPGL 670



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 140/280 (50%), Gaps = 6/280 (2%)

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
           + G+  D  T   ++      G L  GK  H   +KT      ++ + L+ +Y KC   +
Sbjct: 12  YLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETD 71

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
           +A+++F R+P+ ++V WNS+I+G +      E    FK+ R +++   +F+F+  LS C 
Sbjct: 72  VAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCG 131

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
           +      GR +HA I   G    + + ++LI+MYCKCG I  AR  F+     ++V+WN 
Sbjct: 132 RTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNS 191

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC--SHSGLVDVGVEIFNSMQL 634
           +I GY + G  DE +RL   M+  G+  +     + L AC  + S  ++ G ++ +   +
Sbjct: 192 LIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECG-KMLHGCAV 250

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
             G++  +   T ++D   + G   +A  +   MP   DP
Sbjct: 251 KLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP---DP 287



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 36/289 (12%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   GK +HA I +  L  D F+ N L+ELYS   +       F   P  D+ SW +  
Sbjct: 343 EAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTS-- 400

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                        LI   V+NG  E  L++++++   G  P   
Sbjct: 401 -----------------------------LIVGHVQNGQFEGGLTLFHELLFSGRKPDEF 431

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T++ +  A   L  V+ G + H   IK G+     + N+ + +YAKCG    A   F+E 
Sbjct: 432 TISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKET 491

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC---GV 238
             P+ V+++ M+S  A+     EA+++F LM    ++ + ++   VL  C+  G    G+
Sbjct: 492 KNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGL 551

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
                 + D+  + NV  +   C+   LG    L  + S +      GD
Sbjct: 552 RYFEIMKKDHGITPNV--KHSACIVDLLGRAGRLAEAESFIMDSGFEGD 598


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 221/722 (30%), Positives = 363/722 (50%), Gaps = 86/722 (11%)

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L   C +  LE A KL + M E  V    ++  ALVR       L  + +   EG     
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVR-------LCEWKRAHEEGSKVYS 118

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           + L+S+   S  L                         NA L+++ + G    A  VF +
Sbjct: 119 VALSSMNSLSVEL------------------------GNAFLAMFVRFGNLVDAWYVFGK 154

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           MSE N  ++  ++ G AK     EA+ ++ R++    V  D  +   VL       CG  
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVL-----RTCGGI 209

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
            D+             G++VH   ++ G+E D+ + N+L+ MY K GD+ SA ++F  +P
Sbjct: 210 PDL-----------ARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            R ++SWN MI+GY +     + ++L   M+    +PD +T  +++ AC   GD + GR+
Sbjct: 259 RRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318

Query: 360 -----------------------------------MFDSMPSPSVSSWNAMLSSYSQSEN 384
                                              +F  M    + SW  M+S Y  +  
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFL 378

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            ++AI  +R M    VKPD  T+A +LS+CA +G L++G ++H  ++K        VA+ 
Sbjct: 379 PEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI +YSKC+  + A  +FH IP  +++ W S+IAGL LN+   EA +FF+QM+   + P 
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPN 497

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
             +    L++CA++ +   G+++HA + + G   D F+ +AL++MY +CG +  A   F+
Sbjct: 498 AITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFN 557

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
               K+  +WN ++ GY++ G G   V L+  M+ + V+PD+ITF+++L  C  S +V  
Sbjct: 558 S-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQ 616

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G+  F+ M+ ++GV P L HY C++D LGRAG   EA   I +MP   DP +W  LL++C
Sbjct: 617 GLMYFSKME-EYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           R+H N+ L + +A+ +F LD  +   Y LL N+Y+  G+W ++  VR +M EN +  D  
Sbjct: 676 RIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAG 735

Query: 745 YS 746
            S
Sbjct: 736 CS 737



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 262/545 (48%), Gaps = 54/545 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA L+   +  +L  A+ +F +M ERN+ SWN L+    + G  ++A+ +Y++M   G V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGV 192

Query: 118 -PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
            P   T   V +    + D+  GR  H  V++ G + +I V NAL+++Y KCG  K A  
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F+ M   + +++ AM+SG  +     E L++F  M   +V  D ++L+SV+  C   G 
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLG- 311

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                     D +  R++H        I  GF  D+ + NSL  MY   G    AE +FS
Sbjct: 312 ----------DRRLGRDIHA-----YVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFS 356

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            +  + +VSW  MI+GY   +   KAI+  + M     +PDE+T   +L AC   GD+ T
Sbjct: 357 RMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416

Query: 357 GREM-----------------------------------FDSMPSPSVSSWNAMLSSYSQ 381
           G E+                                   F ++P  +V SW ++++    
Sbjct: 417 GVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRL 476

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +    EA+  FR+M+   ++P+  TL   L++CA +G L  GK++HA  L+T   +D+++
Sbjct: 477 NNRCFEALIFFRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFL 535

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + L+ +Y +C R  +A   F+   + D+  WN ++ G S           F +M +  +
Sbjct: 536 PNALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARV 594

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P + +F ++L  C K     QG    +++E+ G   ++   + ++++  + G++  A +
Sbjct: 595 RPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHK 654

Query: 562 FFDMM 566
           F   M
Sbjct: 655 FIQKM 659



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 199/451 (44%), Gaps = 82/451 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H++R G   D  + N LI +Y KC                              
Sbjct: 215 GREVHVHVVRYGYELDIDVVNALITMYVKCG----------------------------- 245

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D++ A  LFD MP R+++SWN +IS    NG+  + L ++  M      P  +TL SV
Sbjct: 246 --DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSV 303

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L D   GR  H  VI  G   +I V N+L  +Y   G  + A  +F  M   + 
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDI 363

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T M+SG        +A++ +R+M + +V  D +++++VL  CA  G   + D     
Sbjct: 364 VSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLG---DLDT---- 416

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G ++H L IK    + + ++N+L++MY+K   +D A  IF N+P ++V+SW
Sbjct: 417 ---------GVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISW 467

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF----- 361
             +IAG     +  +A+   ++MK    +P+ +T    L AC R G +  G+E+      
Sbjct: 468 TSIIAGLRLNNRCFEALIFFRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLR 526

Query: 362 ------DSMPSP-----------------------SVSSWNAMLSSYSQSENHKEAIKLF 392
                 D +P+                         VSSWN +L+ YS+       ++LF
Sbjct: 527 TGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQKKDVSSWNILLTGYSERGQGSVVVELF 586

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESG 423
             M    V+PD  T   +L  C    ++  G
Sbjct: 587 DRMVKARVRPDEITFISLLCGCGKSQMVRQG 617



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 146/340 (42%), Gaps = 38/340 (11%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + GK +HAH+LR G+  D FL N L+++Y +C   + A + F+    KD+ SWN +L+
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQK-KDVSSWNILLT 571

Query: 63  AQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
              +        +LFD M +  V    +++ +L+    ++ +  + L  ++KM   G  P
Sbjct: 572 GYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTP 631

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS---LYAKCGWTKHAV 175
                A V        +++     H  + K+ +  +  V  ALL+   ++      + + 
Sbjct: 632 NLKHYACVVDLLGRAGELQEA---HKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSA 688

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
               E+ + +   +  + +  A   +  E  ++ R+M    +++D+             G
Sbjct: 689 QRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDA-------------G 735

Query: 236 CG---VESDVFA-QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           C    V+  V A  SD+K+    H Q     T+  GF     +S   L   +++  MD  
Sbjct: 736 CSWVEVKGKVHAFLSDDKY----HPQTKEINTVLDGFYEK--MSEVGLTTSSESSSMDET 789

Query: 292 EV----IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           E+    IF    ER  +++ ++ +  G     TK + + +
Sbjct: 790 EISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCE 829



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 121/295 (41%), Gaps = 51/295 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G  LH   ++  L     + N LI +YSKC     A  +F  +P K++           
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNV----------- 464

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                               +SW ++I+ L  N    +AL  + +M      P  ITL +
Sbjct: 465 --------------------ISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPNAITLTA 503

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A   +  +  G+  H  V++ G+  + ++ NALL +Y +CG    A   F   S+  
Sbjct: 504 ALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFN--SQKK 561

Query: 186 EV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +V ++  +++G ++  +    +E+F  M++  V  D ++  S+L  C   GCG +S +  
Sbjct: 562 DVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLL--C---GCG-KSQMVR 615

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           Q    FS+            + G   +L     ++D+  + G++  A      +P
Sbjct: 616 QGLMYFSK----------MEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP 660


>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
 gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
          Length = 777

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 247/761 (32%), Positives = 374/761 (49%), Gaps = 100/761 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  IL++   +D  LCN LI +Y K                               
Sbjct: 62  GMQIHGLILKSPYANDASLCNVLISMYGKYLGY--------------------------- 94

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM----SNEGFVPTHIT 122
              +++A  +FDE+  RN + WN+++S   + G       +++ M    S     P   T
Sbjct: 95  ---IDYARSVFDEIEIRNSIYWNSIVSVYSQRGDAASCFELFSSMQMADSGLSLKPNEYT 151

Query: 123 LASVFKASTALLDVEHGRRCHGLVI----KIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
             S+  A+ +   V+ G    G ++    K GL  N+YV +AL   +++ G   +A  +F
Sbjct: 152 FGSLITAACS--SVDSGLSLLGQILARIKKSGLLANLYVGSALAGGFSRLGSFDYARKIF 209

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           E+M+  N V+   +M GL +     EA+E+F+   R  V I+  S   +L  CA      
Sbjct: 210 EQMTARNAVSMNGLMVGLVRQKCGEEAVEVFK-ETRHLVDINVDSYVILLSACAE----- 263

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
               FA  D    +   G++VH   I+ G  +A + + N L++MYAK GD+D A  +F  
Sbjct: 264 ----FALLDEGRRK---GREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGL 316

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG----- 352
           + ++  VSWN MI G  Q      A++    M+  G  P   T I+ L +C   G     
Sbjct: 317 MVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALSSCASLGCILLG 376

Query: 353 ------DIKTGREM------------------------FDSMPSPSVSSWNAMLSSYSQS 382
                  IK G +M                        F  M      SWN ++ + + S
Sbjct: 377 QQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGALADS 436

Query: 383 -ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
             +  EAI++F EM   G  P+R T   +L++ +++   +   Q+HA  LK     DN +
Sbjct: 437 GASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAI 496

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
            + L+  Y K    E  E +F R+ E  D V WNSMI+G   N L  +A      M Q  
Sbjct: 497 ENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRG 556

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
                F+FATVLS+CA +++  +G +VHA   +    +D+ +GSAL++MY KCG I  A 
Sbjct: 557 QRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYAS 616

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           +FF++M  +N  +WN MI GYA++GYGD A+RL+  M  SG  PD ITFV +L+ACSH G
Sbjct: 617 RFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIG 676

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           LVD G E F SM   +G+ P ++HY+CM+D LGRAG   + +  I++MP K + +IW  +
Sbjct: 677 LVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDNFINKMPIKPNILIWRTV 736

Query: 681 LSSCRLHANVR---LAKRAAEELFRLDPKNSAPYSLLANIY 718
           L +C    N R   L +RAAE LF +DP+N+     + NIY
Sbjct: 737 LGAC-CRGNGRKTELGRRAAEMLFNMDPQNA-----VMNIY 771



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 161/640 (25%), Positives = 293/640 (45%), Gaps = 61/640 (9%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA--STALLDVE 137
           MP+RN V+W  LIS   +NG+ + A  V  +M  EGF+P      S  +A   + L  ++
Sbjct: 1   MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAK-CGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
            G + HGL++K     +  + N L+S+Y K  G+  +A  VF+E+   N + + +++S  
Sbjct: 61  LGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVY 120

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           ++        E+F  M      +         G      C       +  D+  S  + G
Sbjct: 121 SQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAAC-------SSVDSGLS--LLG 171

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           Q +  +  K G  A+L++ ++L   +++ G  D A  IF  +  R+ VS N ++ G  ++
Sbjct: 172 QILARIK-KSGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQ 230

Query: 317 YQSTKAIELLQR---------------MKSC-----------------------GFEPDE 338
               +A+E+ +                + +C                       G    +
Sbjct: 231 KCGEEAVEVFKETRHLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAK 290

Query: 339 VTS----INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           V      INM   C   GDI   R +F  M      SWN+M++   Q++  ++A+K +  
Sbjct: 291 VAVGNGLINMYAKC---GDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNS 347

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+  G+ P   TL   LSSCA++G +  G+Q H   +K    +D  V++ L+ +Y++   
Sbjct: 348 MRKTGLMPSNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGH 407

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDI-EAFMFFKQMRQNEMYPTQFSFATVLS 513
               ++VF  + E D V WN++I  L+ +   + EA   F +M +    P + +F  +L+
Sbjct: 408 LAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLA 467

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTV 572
           + + LS+S    Q+HA I K    +D  + +AL+  Y K G++    + F  M   ++ V
Sbjct: 468 TVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEV 527

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +WN MI GY  N    +A+ L   M+  G + D  TF  +L+AC+    ++ G+E+ ++ 
Sbjct: 528 SWNSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEV-HAC 586

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
            +   +E  +   + ++D   + G    A    + MP ++
Sbjct: 587 AIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPMRN 626



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 195/438 (44%), Gaps = 58/438 (13%)

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------ 351
           +P+R+ V+W  +I+GY Q      A  +L+ M   GF P+     + + AC  S      
Sbjct: 1   MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60

Query: 352 --------------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSY 379
                                           G I   R +FD +   +   WN+++S Y
Sbjct: 61  LGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVY 120

Query: 380 SQSENHKEAIKLFREMQFR----GVKPDRTTLAIILSSCAAMGILESG----KQVHAASL 431
           SQ  +     +LF  MQ       +KP+  T   +++  AA   ++SG     Q+ A   
Sbjct: 121 SQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLIT--AACSSVDSGLSLLGQILARIK 178

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           K+    + YV S L G +S+    + A ++F ++   + V  N ++ GL       EA  
Sbjct: 179 KSGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVE 238

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLS----SSFQGRQVHAQIEKDGYVND--IFVGSA 545
            FK+ R         S+  +LS+CA+ +       +GR+VH    + G +ND  + VG+ 
Sbjct: 239 VFKETRHLVDINVD-SYVILLSACAEFALLDEGRRKGREVHGYAIRTG-LNDAKVAVGNG 296

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           LI MY KCGDI  AR  F +M  K++V+WN MI G  QN   ++AV+ Y  M  +G+ P 
Sbjct: 297 LINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPS 356

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
           + T ++ L++C+  G + +G +      +  G++  +     ++      GH  E + + 
Sbjct: 357 NFTLISALSSCASLGCILLGQQTHGE-GIKLGLDMDVSVSNTLLALYAETGHLAECQKVF 415

Query: 666 DEMPCKDDPVIWEVLLSS 683
             M  + D V W  ++ +
Sbjct: 416 SWM-LERDQVSWNTVIGA 432


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 213/701 (30%), Positives = 365/701 (52%), Gaps = 83/701 (11%)

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDK--NIYVANALLSLYAKC 168
           M   GF P +    +V KA   + ++  G++ H  V K G     ++ + N L+++Y KC
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           G    A  VF+ ++E ++V++ +++S L + +    A++ FRLM+ +     S +L S+ 
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 229 GVCA----REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK 284
             C+    R+G  +                 G+Q+H    + G       +N+L+ MYAK
Sbjct: 121 LACSNLRKRDGLWL-----------------GKQIHGCCFRKGHWRTFS-NNALMAMYAK 162

Query: 285 NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
            G +D A+ +     +R +V+WN MI+ + Q  +  +A+  L+ M   G +PD VT  ++
Sbjct: 163 LGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASV 222

Query: 345 LVAC----------------VRS--------------------GDIKTGREMFDSMPSPS 368
           L AC                +R+                    G +++GR +FDS+    
Sbjct: 223 LPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRK 282

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +  WNAM++ Y+QSE+ ++A+ LF EM+   G+  + TT++ I+ +      +   + +H
Sbjct: 283 IGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIH 342

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
              +K     + Y+ + LI +YS+    + ++R+F  + + DIV WN++I    +     
Sbjct: 343 GYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSS 402

Query: 488 EAFMFFKQM----------------RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
           +A +   +M                +Q    P   +  TVL  CA LS+  +G+++HA  
Sbjct: 403 DALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYA 462

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
            ++   + + VGSAL++MY KCG +  AR+ FD M  +N +TWN +I  Y  +G G E++
Sbjct: 463 IRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESL 522

Query: 592 RLYKDMIASG-----VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
            L++DM+A G     VKP ++TF+A+  +CSHSG+VD G+ +F+ M+ +HG+EP  DHY 
Sbjct: 523 ELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYA 582

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPV-IWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
           C++D +GRAG   EA  L++ MP   D V  W  LL +CR++ N+ + + AAE L +L P
Sbjct: 583 CIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQP 642

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             ++ Y LL+NIYSS G WD    +R  M    + K+P  S
Sbjct: 643 DVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCS 683



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 155/573 (27%), Positives = 259/573 (45%), Gaps = 111/573 (19%)

Query: 7   GKLLHAHILRNGL--FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           GK +HAH+ + G   F    + N L+ +Y KC                            
Sbjct: 29  GKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGG-------------------------- 62

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                L  AYK+FD + ER+ VSWN++ISAL R    E A+  +  M  EGF P+  TL 
Sbjct: 63  -----LGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLV 117

Query: 125 SVFKASTALLDVEH---GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           S+  A + L   +    G++ HG   + G  +  +  NAL+++YAK G    A  +    
Sbjct: 118 SMALACSNLRKRDGLWLGKQIHGCCFRKGHWRT-FSNNALMAMYAKLGRLDDAKSLLVLF 176

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + + VT+ +M+S  ++ +R +EAL   RLM+ + V  D V+ +SVL  C+        D
Sbjct: 177 EDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACS------HLD 230

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKL-GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           +             G+++H   ++      +  + ++L+DMY   G ++S  ++F ++ +
Sbjct: 231 LLRT----------GKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLD 280

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMK-SCGFEPDEVTSINMLVACVRS-------- 351
           R +  WN MIAGY Q     KA+ L   M+ + G   +  T  +++ A VR         
Sbjct: 281 RKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEG 340

Query: 352 ---------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                      GDIKT + +FDSM    + SWN +++SY     
Sbjct: 341 IHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGR 400

Query: 385 HKEAIKLFREMQ-------FRG---------VKPDRTTLAIILSSCAAMGILESGKQVHA 428
             +A+ L  EMQ       + G          KP+  TL  +L  CA++  L  GK++HA
Sbjct: 401 SSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHA 460

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
            +++        V S L+ +Y+KC    LA RVF ++P  +++ WN +I    ++    E
Sbjct: 461 YAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKE 520

Query: 489 AFMFFKQM-----RQNEMYPTQFSFATVLSSCA 516
           +   F+ M     +  E+ PT+ +F  + +SC+
Sbjct: 521 SLELFEDMVAEGAKGGEVKPTEVTFIALFASCS 553



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 180/391 (46%), Gaps = 75/391 (19%)

Query: 6   AGKLLHAHILR-NGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
            GK +HA+ LR + + +++F+ + L+++Y  C    S + +FD +  + I  WNA+++  
Sbjct: 234 TGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGY 293

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +S+  E A  LF EM                     E A  +Y+  +         T++
Sbjct: 294 AQSEHDEKALMLFIEM---------------------EAAAGLYSNAT---------TMS 323

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  A      +      HG VIK GL+ N Y+ NAL+ +Y++ G  K +  +F+ M + 
Sbjct: 324 SIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDR 383

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIR--------------KAVSI--DSVSLSSVL 228
           + V++  +++      R  +AL +   M R              K V    +S++L +VL
Sbjct: 384 DIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVL 443

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
             CA                  S    G+++H   I+    + + + ++L+DMYAK G +
Sbjct: 444 PGCA----------------SLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCL 487

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-----FEPDEVTSIN 343
           + A  +F  +P R+V++WNV+I  YG   +  +++EL + M + G      +P EVT I 
Sbjct: 488 NLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIA 547

Query: 344 MLVACVRSGDIKTGREMFDSM-------PSP 367
           +  +C  SG +  G  +F  M       P+P
Sbjct: 548 LFASCSHSGMVDEGLSLFHKMKNEHGIEPAP 578


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 216/693 (31%), Positives = 355/693 (51%), Gaps = 54/693 (7%)

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTH-ITLASVFKASTALLDVEHGRRCHGLVIKIG 150
           I +L +  L  +AL  ++        P   +T   +  A ++L  +EHGR+ H  ++   
Sbjct: 69  IISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCN 128

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
              ++ + N +LS+Y KCG  K A  +F+ M   N V++T+M+SG ++      A+ ++ 
Sbjct: 129 YQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYV 188

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            M+R     D  +  S++  C+    G++       D K +R     Q+H   +K  F A
Sbjct: 189 QMLRSGHIPDHFTFGSIVKSCS----GLD-------DFKLAR-----QLHAHVLKSEFGA 232

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           DL   N+L+ MY K   M  A  +FS +  + ++SW  MIAG+ Q     +A+   + M 
Sbjct: 233 DLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREML 292

Query: 331 SCG-FEPDEVTSINMLVAC-----------------------------------VRSGDI 354
           S   ++P+E    +   AC                                    + G +
Sbjct: 293 SQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFL 352

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           ++ R +F  +  P + +WNA+++ ++   N KE+   F +M+  G+ P+  T+  +L +C
Sbjct: 353 ESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCAC 412

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCW 473
           +   +L  G QVH+  +K   ++D  V + L+ +YSKC     A +VF  I  + DIV W
Sbjct: 413 SEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSW 472

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           N+++      +   E     K M  + + P   +   VL S  +++S   G Q+H  I K
Sbjct: 473 NTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMK 532

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G   DI V +ALI MY KCG +  AR+ FD +   + ++W+ +I GYAQ G G EA  L
Sbjct: 533 SGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFEL 592

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           ++ M   GVKP++ITFV ILTACSH G+V+ G++++ +MQ D+ + P  +H +CM+D L 
Sbjct: 593 FRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLA 652

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           RAG    AE  I +MP   D V+W+ LL++C++H N+ + KRAAE + ++DP NSA   +
Sbjct: 653 RAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVM 712

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L NI++S G W D   +R  M    + K P  S
Sbjct: 713 LCNIHASSGHWKDFARLRSSMRRMDVGKVPGQS 745



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 165/620 (26%), Positives = 290/620 (46%), Gaps = 86/620 (13%)

Query: 43  QHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEE 102
           +H+       D+   N ILS   K   L+ A  +FD MP +NVVSW ++IS   R G E+
Sbjct: 122 RHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEED 181

Query: 103 KALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALL 162
            A+++Y +M   G +P H T  S+ K+ + L D +  R+ H  V+K     ++   NAL+
Sbjct: 182 NAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALI 241

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDS 221
           S+Y K      A+ VF  +   + +++ +M++G ++    +EAL  FR M+ ++V   + 
Sbjct: 242 SMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNE 301

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDM 281
               S    C++    +E D              G+Q+H L IK G  +DL    SL DM
Sbjct: 302 FVFGSAFSACSKL---LEPDC-------------GRQIHGLCIKFGLGSDLFAGCSLCDM 345

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           YAK G ++SA  +F ++ +  +V+WN +IAG+     + ++     +M+  G  P++VT 
Sbjct: 346 YAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTV 405

Query: 342 INMLVAC-----------VRSGDIKTG------------------------REMFDSMPS 366
           +++L AC           V S  +K G                         ++F+ + +
Sbjct: 406 LSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGN 465

Query: 367 PS-VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
            + + SWN +L++  Q     E ++L + M    +KPD  TL  +L S   +   E G Q
Sbjct: 466 KADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQ 525

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +H   +K+  ++D  V++ LI +Y+KC   E A ++F  I   DI+ W+S+I G +    
Sbjct: 526 IHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGC 585

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             EAF  F+ MR   + P + +F  +L++C+ +    +G +++  +++D  ++       
Sbjct: 586 GKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISP------ 639

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
             + +C C                       M+   A+ G  D A    K M      PD
Sbjct: 640 -TKEHCSC-----------------------MVDLLARAGCLDVAEDFIKQM---PFVPD 672

Query: 606 DITFVAILTACSHSGLVDVG 625
            + +  +L AC   G ++VG
Sbjct: 673 VVVWKTLLAACKVHGNLEVG 692



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 62/112 (55%), Gaps = 4/112 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  I+++GL  D  + N LI +Y+KC +   A+ +FD + + DI SW++++    +
Sbjct: 523 GSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQ 582

Query: 67  SDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
           +   + A++LF  M     + N +++  +++A    G+ E+ L +Y  M  +
Sbjct: 583 AGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQED 634


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 209/629 (33%), Positives = 320/629 (50%), Gaps = 86/629 (13%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           +N++  N+LLS++AK G    A  VF EM E + V++T M+ GL +  R  EA++    M
Sbjct: 96  RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
                +    +L++VL  CA    G                  G++VH   +KLG  + +
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAV----------------GRKVHSFVVKLGLGSCV 199

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            ++NS+L+MY K GD ++A  +F  +P RSV SWN M+                      
Sbjct: 200 PVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMV---------------------- 237

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                   S+N  +     G +     +F+SMP  S+ SWNAM++ Y+Q+    +A+KLF
Sbjct: 238 --------SLNTHL-----GRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLF 284

Query: 393 -REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
            R +    + PD  T+  +LS+CA +G +  GKQVHA  L+T    ++ V + LI  Y+K
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 344

Query: 452 CQRNELAERV---------------------------------FHRIPELDIVCWNSMIA 478
               E A R+                                 F  +   D+V W +MI 
Sbjct: 345 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 404

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G   N  + EA   F+ M      P  ++ A VLS CA L+    G+Q+H +  +     
Sbjct: 405 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLER 464

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
              V +A+I MY + G    AR+ FD +   K T+TW  MI   AQ+G G+EAV L+++M
Sbjct: 465 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 524

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           + +GV+PD IT+V +L+ACSH+G V+ G   ++ ++ +H + P + HY CM+D L RAG 
Sbjct: 525 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGL 584

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
           F EA+  I  MP + D + W  LLS+CR+H N  LA+ AAE+L  +DP NS  YS +AN+
Sbjct: 585 FSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANV 644

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           YS+ GRW D   + +   E  + K+  +S
Sbjct: 645 YSACGRWSDAARIWKARKEKAVRKETGFS 673



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 156/586 (26%), Positives = 258/586 (44%), Gaps = 131/586 (22%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSK----CNNTHSAQHLFDKMP--HKDIYSWNA 59
           AG+ +HA  ++ GL    +LCN L+  Y +          A+ LFD++P   +++++WN+
Sbjct: 44  AGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNS 103

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           +LS   KS  L  A  +F EMPER+ VSW  ++  L R G   +A+     M+ +GF PT
Sbjct: 104 LLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPT 163

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             TL +V  +         GR+ H  V+K+GL   + VAN++L++Y KCG  + A  VFE
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFE 223

Query: 180 EM-----------------------------SEPNE--VTFTAMMSGLAKTDRVVEALEM 208
            M                             S P    V++ AM++G  +     +AL++
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKL 283

Query: 209 F-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKL 266
           F R++   +++ D  +++SVL  CA  G                 NV  G+QVH   ++ 
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLG-----------------NVRIGKQVHAYILRT 326

Query: 267 GFEADLHLSNSLLDMYAKN---------------------------------GDMDSAEV 293
               +  ++N+L+  YAK+                                 GDM+SA  
Sbjct: 327 EMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESARE 386

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----- 348
           +F  +  R VV+W  MI GY Q  ++ +AI+L + M +CG EP+  T   +L  C     
Sbjct: 387 MFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLAC 446

Query: 349 ------------------------------VRSGDIKTGREMFDSMP-SPSVSSWNAMLS 377
                                          RSG     R MFD +       +W +M+ 
Sbjct: 447 LDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIV 506

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH---AASLKTA 434
           + +Q    +EA+ LF EM   GV+PDR T   +LS+C+  G +  GK+ +       + A
Sbjct: 507 ALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIA 566

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
             + +Y    ++ + ++      A+    R+P E D + W S+++ 
Sbjct: 567 PEMSHYAC--MVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSA 610



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 240/501 (47%), Gaps = 60/501 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   G+ +H+ +++ GL     + N ++ +Y KC +  +A  +F++MP + + SWNA++
Sbjct: 178 QAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMV 237

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTH 120
           S       ++ A  LF+ MP R++VSWN +I+   +NGL+ KAL ++++M +E    P  
Sbjct: 238 SLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDE 297

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T+ SV  A   L +V  G++ H  +++  +  N  V NAL+S YAK G  ++A  + ++
Sbjct: 298 FTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQ 357

Query: 181 ---------------------------------MSEPNEVTFTAMMSGLAKTDRVVEALE 207
                                            M+  + V +TAM+ G  +  R  EA++
Sbjct: 358 SMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAID 417

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +FR MI      +S +L++VL VCA   C                  +G+Q+HC  I+  
Sbjct: 418 LFRSMITCGPEPNSYTLAAVLSVCASLAC----------------LDYGKQIHCRAIRSL 461

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVSWNVMIAGYGQKYQSTKAIELL 326
            E    +SN+++ MYA++G    A  +F  +  R   ++W  MI    Q  Q  +A+ L 
Sbjct: 462 LERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQ 381
           + M   G EPD +T + +L AC  +G +  G+  +D +      +P +S +  M+   ++
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLAR 581

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +    EA +  R M    V+PD      +LS+C      E   ++ A  L +    ++  
Sbjct: 582 AGLFSEAQEFIRRMP---VEPDAIAWGSLLSACRVHKNAELA-ELAAEKLLSIDPNNSGA 637

Query: 442 ASGLIGIYSKCQRNELAERVF 462
            S +  +YS C R   A R++
Sbjct: 638 YSAIANVYSACGRWSDAARIW 658


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 216/693 (31%), Positives = 355/693 (51%), Gaps = 54/693 (7%)

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTH-ITLASVFKASTALLDVEHGRRCHGLVIKIG 150
           I +L +  L  +AL  ++        P   +T   +  A ++L  +EHGR+ H  ++   
Sbjct: 69  IISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCN 128

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
              ++ + N +LS+Y KCG  K A  +F+ M   N V++T+M+SG ++      A+ ++ 
Sbjct: 129 YQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYV 188

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            M+R     D  +  S++  C+    G++       D K +R     Q+H   +K  F A
Sbjct: 189 QMLRSGHIPDHFTFGSIVKSCS----GLD-------DFKLAR-----QLHAHVLKSEFGA 232

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           DL   N+L+ MY K   M  A  +FS +  + ++SW  MIAG+ Q     +A+   + M 
Sbjct: 233 DLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREML 292

Query: 331 SCG-FEPDEVTSINMLVAC-----------------------------------VRSGDI 354
           S   ++P+E    +   AC                                    + G +
Sbjct: 293 SQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFL 352

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           ++ R +F  +  P + +WNA+++ ++   N KE+   F +M+  G+ P+  T+  +L +C
Sbjct: 353 ESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCAC 412

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCW 473
           +   +L  G QVH+  +K   ++D  V + L+ +YSKC     A +VF  I  + DIV W
Sbjct: 413 SEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSW 472

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           N+++      +   E     K M  + + P   +   VL S  +++S   G Q+H  I K
Sbjct: 473 NTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMK 532

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G   DI V +ALI MY KCG +  AR+ FD +   + ++W+ +I GYAQ G G EA  L
Sbjct: 533 SGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFEL 592

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           ++ M   GVKP++ITFV ILTACSH G+V+ G++++ +MQ D+ + P  +H +CM+D L 
Sbjct: 593 FRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLA 652

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           RAG    AE  I +MP   D V+W+ LL++C++H N+ + KRAAE + ++DP NSA   +
Sbjct: 653 RAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVM 712

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L NI++S G W D   +R  M    + K P  S
Sbjct: 713 LCNIHASSGHWKDFARLRSSMRRMDVGKVPGQS 745



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 158/587 (26%), Positives = 284/587 (48%), Gaps = 60/587 (10%)

Query: 43  QHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEE 102
           +H+       D+   N ILS   K   L+ A  +FD MP +NVVSW ++IS   R G E+
Sbjct: 122 RHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEED 181

Query: 103 KALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALL 162
            A+++Y +M   G +P H T  S+ K+ + L D +  R+ H  V+K     ++   NAL+
Sbjct: 182 NAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALI 241

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDS 221
           S+Y K      A+ VF  +   + +++ +M++G ++    +EAL  FR M+ ++V   + 
Sbjct: 242 SMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNE 301

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDM 281
               S    C++    +E D              G+Q+H L IK G  +DL    SL DM
Sbjct: 302 FVFGSAFSACSKL---LEPDC-------------GRQIHGLCIKFGLGSDLFAGCSLCDM 345

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           YAK G ++SA  +F ++ +  +V+WN +IAG+     + ++     +M+  G  P++VT 
Sbjct: 346 YAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTV 405

Query: 342 INMLVAC-----------VRSGDIKTG------------------------REMFDSMPS 366
           +++L AC           V S  +K G                         ++F+ + +
Sbjct: 406 LSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGN 465

Query: 367 PS-VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
            + + SWN +L++  Q     E ++L + M    +KPD  TL  +L S   +   E G Q
Sbjct: 466 KADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQ 525

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +H   +K+  ++D  V++ LI +Y+KC   E A ++F  I   DI+ W+S+I G +    
Sbjct: 526 IHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGC 585

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-S 544
             EAF  F+ MR   + P + +F  +L++C+ +    +G +++  +++D  ++      S
Sbjct: 586 GKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCS 645

Query: 545 ALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEM-----IHGYAQNG 585
            ++++  + G +  A  F   M    + V W  +     +HG  + G
Sbjct: 646 CMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVG 692



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 62/112 (55%), Gaps = 4/112 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  I+++GL  D  + N LI +Y+KC +   A+ +FD + + DI SW++++    +
Sbjct: 523 GSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQ 582

Query: 67  SDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
           +   + A++LF  M     + N +++  +++A    G+ E+ L +Y  M  +
Sbjct: 583 AGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQED 634


>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 197/592 (33%), Positives = 309/592 (52%), Gaps = 104/592 (17%)

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDM------------------------------ 288
           VH   IK GF  ++ + N L+D YAK G +                              
Sbjct: 42  VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101

Query: 289 -DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
            D A+ +F ++PER   +WN M++G+ Q  +  +A+     M   GF  +E T  + L A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161

Query: 348 CV-----------------------------------RSGDIKTGREMFDSMPSPSVSSW 372
           C                                    + G++   +++FD M   +V SW
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSW 221

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           N++++ Y Q+    EA+K+F+ M    V+PD  TLA ++S+CA++  ++ G++VHA  +K
Sbjct: 222 NSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVK 281

Query: 433 TASHIDNYVAS-GLIGIYSKCQRNELAERVFHRIP------------------------- 466
                ++ + S   + +Y+KC R + A  +F  +P                         
Sbjct: 282 MDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARL 341

Query: 467 ------ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
                 E ++V WN++IAG + N  + EA   F  +++  + PT ++FA +L +CA L+ 
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLAD 401

Query: 521 SFQGRQVHAQIEKDGYV------NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
              G Q H  + K G+       +DIFVG++LI+MY KCG +      F  M  ++ V+W
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI G+AQNGYG+EA+ L+++M+ SG KPD IT + +L+AC H+G V+ G   F+SM  
Sbjct: 462 NAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           D GV P+ DHYTCM+D LGRAG   EA+ +I+EMP + D VIW  LL++C++H N+ L K
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGK 581

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             AE+LF ++  NS PY LL+N+Y+ LG+W D   VR+LM +  + K P  S
Sbjct: 582 YVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCS 633



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 157/549 (28%), Positives = 263/549 (47%), Gaps = 95/549 (17%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + +HA ++++G  ++ F+ NRLI+ Y+KC +    + LFDKMP +++++WN++++   K 
Sbjct: 40  RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
             L+ A  LF  MPER+  +WN+++S   ++   E+AL  +  M  EGFV    T AS  
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGL 159

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A + L D+  G + H L+ K     ++Y+ +AL+ +Y+KCG    A  VF+EM + N V
Sbjct: 160 SACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVV 219

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++ ++++   +    VEAL++F++M+   V  D V+L+SV+  CA               
Sbjct: 220 SWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACA--------------- 264

Query: 248 NKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP------- 299
              S    GQ+VH   +K+     D+ LSN+ +DMYAK   +  A  IF ++P       
Sbjct: 265 -SLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAE 323

Query: 300 ------------------------ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
                                   ER+VVSWN +IAGY Q  ++ +A+ L   +K     
Sbjct: 324 TSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVC 383

Query: 336 PDEVTSINMLVAC-----------------------------------------VRSGDI 354
           P   T  N+L AC                                         V+ G +
Sbjct: 384 PTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 443

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           + G  +F  M      SWNAM+  ++Q+    EA++LFREM   G KPD  T+  +LS+C
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSAC 503

Query: 415 AAMGILESGKQVHAASLK---TASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDI 470
              G +E G+   ++  +    A   D+Y    ++ +  +    E A+ +   +P + D 
Sbjct: 504 GHAGFVEEGRHYFSSMTRDFGVAPLRDHYTC--MVDLLGRAGFLEEAKSIIEEMPVQPDS 561

Query: 471 VCWNSMIAG 479
           V W S++A 
Sbjct: 562 VIWGSLLAA 570



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 213/464 (45%), Gaps = 95/464 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H+ I ++    D ++ + L+++YSKC N + AQ                       
Sbjct: 171 GVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQ----------------------- 207

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++FDEM +RNVVSWN+LI+   +NG   +AL V+  M      P  +TLASV
Sbjct: 208 --------QVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASV 259

Query: 127 FKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHA------VPV-- 177
             A  +L  ++ G+  H  V+K+  L  +I ++NA + +YAKC   K A      +P+  
Sbjct: 260 ISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319

Query: 178 -----------------------FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
                                  F +M+E N V++ A+++G  +     EAL +F L+ R
Sbjct: 320 VIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGF----- 268
           ++V     + +++L  CA                    ++H G Q H   +K GF     
Sbjct: 380 ESVCPTHYTFANILKACADLA-----------------DLHLGMQAHVHVLKHGFKFQSG 422

Query: 269 -EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
            E D+ + NSL+DMY K G ++   ++F  + ER  VSWN MI G+ Q     +A+EL +
Sbjct: 423 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 482

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQS 382
            M   G +PD +T I +L AC  +G ++ GR  F SM      +P    +  M+    ++
Sbjct: 483 EMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 542

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
              +EA  +  EM    V+PD      +L++C     +  GK V
Sbjct: 543 GFLEEAKSIIEEMP---VQPDSVIWGSLLAACKVHRNITLGKYV 583



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 40/227 (17%)

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLS-SSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
           +F K       +     FA +L SC KL  S+   R VHA + K G+ N++F+ + LI+ 
Sbjct: 5   IFLKLAGDLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDA 64

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM----------IA 599
           Y KCG +   RQ FD M  +N  TWN ++ G  + G+ DEA  L++ M          + 
Sbjct: 65  YAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124

Query: 600 SGVKPDD---------------------ITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
           SG    D                      TF + L+ACS    ++ GV+I + +      
Sbjct: 125 SGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLI----AK 180

Query: 639 EPIL-DHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            P L D Y  + ++D   + G+ ++A+ + DEM  + + V W  L++
Sbjct: 181 SPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDR-NVVSWNSLIT 226


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 198/606 (32%), Positives = 326/606 (53%), Gaps = 54/606 (8%)

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+E+     + +  +M+ LAK+     ++ +F+ M+   V +DS + S V          
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV---------- 50

Query: 238 VESDVFAQSDNKFSRNVHG-QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
             S  F+       R+VHG +Q+H   +K GF     + NSL+  Y KN  +DSA  +F 
Sbjct: 51  --SKSFSSL-----RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFD 103

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS----- 351
            + ER V+SWN +I GY     + K + +  +M   G E D  T +++   C  S     
Sbjct: 104 EMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL 163

Query: 352 ------------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                                         GD+ + + +F  M   SV S+ +M++ Y++
Sbjct: 164 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 223

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
                EA+KLF EM+  G+ PD  T+  +L+ CA   +L+ GK+VH    +     D +V
Sbjct: 224 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 283

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
           ++ L+ +Y+KC   + AE VF  +   DI+ WN++I G S N    EA   F  + + + 
Sbjct: 284 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 343

Query: 502 Y-PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           + P + + A VL +CA LS+  +GR++H  I ++GY +D  V ++L++MY KCG +  A 
Sbjct: 344 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 403

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
             FD +  K+ V+W  MI GY  +G+G EA+ L+  M  +G++ D+I+FV++L ACSHSG
Sbjct: 404 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 463

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           LVD G   FN M+ +  +EP ++HY C++D L R G   +A   I+ MP   D  IW  L
Sbjct: 464 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 523

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           L  CR+H +V+LA++ AE++F L+P+N+  Y L+ANIY+   +W+ ++ +R+ + +  + 
Sbjct: 524 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 583

Query: 741 KDPAYS 746
           K+P  S
Sbjct: 584 KNPGCS 589



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/543 (26%), Positives = 255/543 (46%), Gaps = 56/543 (10%)

Query: 77  FDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDV 136
           FDE+     + WN L++ L ++G    ++ ++ KM + G      T + V K+ ++L  V
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 137 EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
             G + HG ++K G  +   V N+L++ Y K      A  VF+EM+E + +++ ++++G 
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH- 255
                  + L +F  M+   + ID  ++ SV   CA                  SR +  
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD-----------------SRLISL 163

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ VH + +K  F  +    N+LLDMY+K GD+DSA+ +F  + +RSVVS+  MIAGY +
Sbjct: 164 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 223

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR------------------------- 350
           +  + +A++L + M+  G  PD  T   +L  C R                         
Sbjct: 224 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 283

Query: 351 ----------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR-EMQFRG 399
                      G ++    +F  M    + SWN ++  YS++    EA+ LF   ++ + 
Sbjct: 284 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 343

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
             PD  T+A +L +CA++   + G+++H   ++     D +VA+ L+ +Y+KC    LA 
Sbjct: 344 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 403

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            +F  I   D+V W  MIAG  ++    EA   F QMRQ  +   + SF ++L +C+   
Sbjct: 404 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 463

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMMH-GKNTVTWNEM 577
              +G +    +  +  +       A +++M  + GD+  A +F + M    +   W  +
Sbjct: 464 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 523

Query: 578 IHG 580
           + G
Sbjct: 524 LCG 526



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 209/456 (45%), Gaps = 87/456 (19%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ LH  IL++G  +   + N L+  Y K     SA+                      
Sbjct: 62  GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSAR---------------------- 99

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                    K+FDEM ER+V+SWN++I+  V NGL EK LSV+ +M   G      T+ S
Sbjct: 100 ---------KVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 150

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           VF        +  GR  H + +K    +     N LL +Y+KCG    A  VF EMS+ +
Sbjct: 151 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 210

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T+M++G A+     EA+++F  M  + +S D  ++++VL  CAR            
Sbjct: 211 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR------------ 258

Query: 246 SDNKFSRNVHGQQVHCLTIK--LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
               +     G++VH    +  LGF  D+ +SN+L+DMYAK G M  AE++FS +  + +
Sbjct: 259 ----YRLLDEGKRVHEWIKENDLGF--DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 312

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQ-RMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--- 359
           +SWN +I GY +   + +A+ L    ++   F PDE T   +L AC        GRE   
Sbjct: 313 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 372

Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                           +FD + S  + SW  M++ Y      KE
Sbjct: 373 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 432

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           AI LF +M+  G++ D  +   +L +C+  G+++ G
Sbjct: 433 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 468



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 239/505 (47%), Gaps = 71/505 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+  ++     +   CN L+++YSKC +  SA+ +F +M  + + S+ ++++   +
Sbjct: 164 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 223

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A KLF+EM E                               EG  P   T+ +V
Sbjct: 224 EGLAGEAVKLFEEMEE-------------------------------EGISPDVYTVTAV 252

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                    ++ G+R H  + +  L  +I+V+NAL+ +YAKCG  + A  VF EM   + 
Sbjct: 253 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 312

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +++  ++ G +K     EAL +F L++  K  S D  +++ VL  CA             
Sbjct: 313 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA------------- 359

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S + F +   G+++H   ++ G+ +D H++NSL+DMYAK G +  A ++F ++  + +VS
Sbjct: 360 SLSAFDK---GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 416

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W VMIAGYG      +AI L  +M+  G E DE++ +++L AC  SG +  G   F+ M 
Sbjct: 417 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 476

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P+V  +  ++   +++    + IK +R ++   + PD T    +L  C     +
Sbjct: 477 HECKIEPTVEHYACIVDMLART---GDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 533

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI-----VCW-- 473
           +  ++V     +       Y    +  IY++ ++ E  +R+  RI +  +       W  
Sbjct: 534 KLAEKVAEKVFELEPENTGYYVL-MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 592

Query: 474 -----NSMIAGLSLN--SLDIEAFM 491
                N  +AG S N  + +IEAF+
Sbjct: 593 IKGRVNIFVAGDSSNPETENIEAFL 617


>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
 gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 228/780 (29%), Positives = 377/780 (48%), Gaps = 80/780 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++  G   D F+   L+ +Y KC     A  +FD         W     +Q +
Sbjct: 79  GKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD--------GW-----SQSQ 125

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S            +  R+V  WN++I    +    ++ +  + +M   G  P   +L+ V
Sbjct: 126 SG-----------VSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIV 174

Query: 127 FKA--STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
                       E G++ HG +++  LD + ++  AL+ +Y K G +  A  VF E+ + 
Sbjct: 175 VSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDK 234

Query: 185 -NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V +  M+ G   +     +L+++ L    +V + S S +  LG C+           
Sbjct: 235 SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS----------- 283

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
            QS+N    +  G+Q+HC  +K+G   D ++  SLL MY+K G +  AE +FS + ++ +
Sbjct: 284 -QSEN----SGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
             WN M+A Y +      A++L   M+     PD  T  N++  C   G    G+ +   
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           F SM    + +W +++S   ++   KEA
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458

Query: 389 IKLFREMQFR--GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           +K+F +M+     +KPD   +  + ++CA +  L  G QVH + +KT   ++ +V S LI
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +YSKC   E+A +VF  +   ++V WNSMI+  S N+L   +   F  M    ++P   
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSV 578

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           S  +VL + +  +S  +G+ +H    + G  +D  + +ALI+MY KCG    A   F  M
Sbjct: 579 SITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 638

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             K+ +TWN MI+GY  +G    A+ L+ +M  +G  PDD+TF+++++AC+HSG V+ G 
Sbjct: 639 QHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGK 698

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
            IF  M+ D+G+EP ++HY  M+D LGRAG   EA   I  MP + D  IW  LLS+ R 
Sbjct: 699 NIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRT 758

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           H NV L   +AE+L R++P+  + Y  L N+Y   G  ++   +  LM E  + K P  S
Sbjct: 759 HHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCS 818



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 184/660 (27%), Positives = 312/660 (47%), Gaps = 62/660 (9%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEG-FVPTHITLASVFKASTALLDVEHGRRCHGL 145
           S N+ I AL++ G   +AL +Y+K      F  +  T  S+ KA +AL ++ +G+  HG 
Sbjct: 26  SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE-------VTFTAMMSGLAK 198
           V+ +G   + ++A +L+++Y KCG+  +AV VF+  S+            + +M+ G  K
Sbjct: 86  VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
             R  E +  FR M+   V  D+ SLS V+ V  +EG              F R   G+Q
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG-------------NFRRE-EGKQ 191

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVSWNVMIAGYGQKY 317
           +H   ++   + D  L  +L+DMY K G    A  +F  + ++S VV WNVMI G+G   
Sbjct: 192 IHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSG 251

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----------------- 360
               +++L    K+   +    +    L AC +S +   GR++                 
Sbjct: 252 ICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCT 311

Query: 361 ------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                             F  +    +  WNAM+++Y++++    A+ LF  M+ + V P
Sbjct: 312 SLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP 371

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  TL+ ++S C+ +G+   GK VHA   K      + + S L+ +YSKC  +  A  VF
Sbjct: 372 DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVF 431

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE--MYPTQFSFATVLSSCAKLSS 520
             + E D+V W S+I+GL  N    EA   F  M+ ++  + P      +V ++CA L +
Sbjct: 432 KSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEA 491

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G QVH  + K G V ++FVGS+LI++Y KCG    A + F  M  +N V WN MI  
Sbjct: 492 LRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISC 551

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           Y++N   + ++ L+  M++ G+ PD ++  ++L A S +  +  G  + +   L  G+  
Sbjct: 552 YSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL-HGYTLRLGIPS 610

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
                  +ID   + G    AE +  +M  K   + W +++     H +   A    +E+
Sbjct: 611 DTHLKNALIDMYVKCGFSKYAENIFKKMQHK-SLITWNLMIYGYGSHGDCITALSLFDEM 669


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 208/626 (33%), Positives = 319/626 (50%), Gaps = 61/626 (9%)

Query: 143 HGLVIK-IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
           H L+++ +      Y+ N LL+ YA  G   HA  VF+ M   N VT  +++S LA+   
Sbjct: 33  HALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGL 92

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLG----------------VCAREGCGVESDVFAQ 245
           V +   +F  + ++    D+VS +++L                    R+  GV       
Sbjct: 93  VRDMERLFTSLPQR----DAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITM 148

Query: 246 SD-----NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           S      +       G+QVHC  ++LGF A     + L+DMYAK G +  A  +F  +  
Sbjct: 149 SGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEG 208

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           ++VV  N MI G                                    +R   +   R +
Sbjct: 209 KNVVMCNTMITGL-----------------------------------LRCKMVAEARAL 233

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F+++      +W  M++  +Q+    EA+ +FR M+  GV  D+ T   IL++C A+  L
Sbjct: 234 FEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAAL 293

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
           E GKQ+HA   +T    + +V S L+ +YSKC+   LAE VF R+   +I+ W +MI G 
Sbjct: 294 EEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGY 353

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
             N    EA   F +M+++ + P  F+  +V+SSCA L+S  +G Q H      G    +
Sbjct: 354 GQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYV 413

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            V +AL+ +Y KCG I  A + FD M   + V+W  ++ GYAQ G   E + L++ M++ 
Sbjct: 414 TVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSK 473

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           GVKPD +TF+ +L+ACS SGLVD G   F+SMQ DH + P+ DHYTCMID   R+G   +
Sbjct: 474 GVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQ 533

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           AE  I +MP   D   W  LLS+CRL  ++ + K AAE L +LDP+N A Y LL ++++S
Sbjct: 534 AEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHAS 593

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
            G W+D+  +R  M +  + K+P  S
Sbjct: 594 KGEWNDVAKLRRGMRDRQVKKEPGCS 619



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 212/423 (50%), Gaps = 24/423 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  ILR G     F  + L+++Y+K      A+ +FD+M  K++   N +++   +
Sbjct: 164 GRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLR 223

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +  A  LF+ + ER+ ++W  +++ L +NGLE +AL V+ +M  EG      T  S+
Sbjct: 224 CKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSI 283

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  AL  +E G++ H  + +   + N++V +AL+ +Y+KC   + A  VF  M   N 
Sbjct: 284 LTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNI 343

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TAM+ G  +     EA+ +F  M R  +  D  +L SV+  CA              
Sbjct: 344 ISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCA-------------- 389

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G Q HCL +  G    + +SN+L+ +Y K G ++ A  +F  +     VSW
Sbjct: 390 --NLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 447

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             ++ GY Q  ++ + I+L ++M S G +PD VT I +L AC RSG +  GR  F SM  
Sbjct: 448 TALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQ 507

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  M+  YS+S   K+A +  ++M      PD    A +LS+C   G +E
Sbjct: 508 DHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMP---RCPDAFGWATLLSACRLRGDME 564

Query: 422 SGK 424
            GK
Sbjct: 565 IGK 567



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/603 (24%), Positives = 266/603 (44%), Gaps = 101/603 (16%)

Query: 10  LHAHILRNGLFDD-TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           +HA ILR       T+L N L+  Y+       A+ +FD MP +++ + N++LSA  ++ 
Sbjct: 32  VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE--GFVPTHITLASV 126
            +    +LF  +P+R+ VS+N L++   R G   +A   Y  +  +  G  P+ IT++ V
Sbjct: 92  LVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGV 151

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM----- 181
              ++AL D   GR+ H  ++++G     +  + L+ +YAK G    A  VF+EM     
Sbjct: 152 VMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNV 211

Query: 182 --------------------------SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
                                      E + +T+T M++GL +     EAL++FR M  +
Sbjct: 212 VMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAE 271

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            V ID  +  S+L  C       E                G+Q+H    +  +E ++ + 
Sbjct: 272 GVGIDQYTFGSILTACGALAALEE----------------GKQIHAYITRTCYEDNVFVG 315

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           ++L+DMY+K   +  AE +F  +  ++++SW  MI GYGQ     +A+ +   M+  G +
Sbjct: 316 SALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIK 375

Query: 336 PDEVTSINMLVACV-----------------------------------RSGDIKTGREM 360
           PD+ T  +++ +C                                    + G I+    +
Sbjct: 376 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRL 435

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FD M      SW A++  Y+Q    KE I LF +M  +GVKPD  T   +LS+C+  G++
Sbjct: 436 FDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLV 495

Query: 421 ESGKQVHAASLKTASHI----DNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNS 475
           + G+  +  S++    I    D+Y    +I +YS+    + AE    ++P   D   W +
Sbjct: 496 DKGRS-YFHSMQQDHDIVPLDDHYTC--MIDLYSRSGWLKQAEEFIKQMPRCPDAFGWAT 552

Query: 476 MIAGLSLNS-LDIEAFMFFKQMRQNEMYPTQFSFATVL-------SSCAKLSSSFQGRQV 527
           +++   L   ++I  +     ++ +   P  +     +       +  AKL    + RQV
Sbjct: 553 LLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQV 612

Query: 528 HAQ 530
             +
Sbjct: 613 KKE 615


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 202/630 (32%), Positives = 345/630 (54%), Gaps = 52/630 (8%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KN+   N ++  Y K G    A  +F+ M + + VT+T ++ G A+ +R +EA  +F  M
Sbjct: 71  KNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADM 130

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
            R  +  D ++L+++L                    +F       QVH   +K+G+++ L
Sbjct: 131 CRHGMVPDHITLATLLS----------------GFTEFESVNEVAQVHGHVVKVGYDSTL 174

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            + NSLLD Y K   +  A  +F ++ E+  V++N ++ GY ++  +  AI L  +M+  
Sbjct: 175 MVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDL 234

Query: 333 GFEPDEVTSINMLVACVRSGDIKTG----------------------------------- 357
           GF P E T   +L A ++  DI+ G                                   
Sbjct: 235 GFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEA 294

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R++F  MP     S+N +++  + +   +E+++LFRE+QF      +   A +LS  A  
Sbjct: 295 RKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANS 354

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
             LE G+Q+H+ ++ T +  +  V + L+ +Y+KC +   A R+F  +     V W ++I
Sbjct: 355 LNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALI 414

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
           +G     L  +    F +M + ++     ++A++L +CA L+S   G+Q+H++I + G +
Sbjct: 415 SGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCL 474

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           +++F GSAL++MY KCG I  A Q F  M  +N+V+WN +I  YAQNG G  A+R ++ M
Sbjct: 475 SNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQM 534

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           I SG++P+ ++F++IL ACSH GLV+ G++ FNSM   + +EP  +HY  M+D L R+G 
Sbjct: 535 IHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGR 594

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYSLLAN 716
           F EAE L+  MP + D ++W  +L+SCR+H N  LA +AA++LF +   +++APY  ++N
Sbjct: 595 FDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSN 654

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           IY++ G WD +  V++ + E  I K PAYS
Sbjct: 655 IYAAAGEWDSVGKVKKALRERGIRKVPAYS 684



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 164/645 (25%), Positives = 292/645 (45%), Gaps = 94/645 (14%)

Query: 12  AHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLE 71
           A +++ G   +T   N  ++ + +  +  +A+ LFD+MPHK++ S N ++    KS +L 
Sbjct: 31  ASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLS 90

Query: 72  FAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
            A  LFD M +R+VV+W  LI    ++    +A +++  M   G VP HITLA++    T
Sbjct: 91  TARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFT 150

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
               V    + HG V+K+G D  + V N+LL  Y K      A  +F+ M+E + VTF A
Sbjct: 151 EFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNA 210

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           +++G +K     +A+ +F  M          + ++VL        G++ D     D +F 
Sbjct: 211 LLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA------GIQMD-----DIEF- 258

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               GQQVH   +K  F  ++ ++N+LLD Y+K+  +  A  +F  +PE   +S+NV+I 
Sbjct: 259 ----GQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLIT 314

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------ 359
                 +  +++EL + ++   F+  +     +L     S +++ GR+            
Sbjct: 315 CCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAIS 374

Query: 360 -----------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                  +F  +   S   W A++S Y Q   H++ +KLF EM 
Sbjct: 375 EVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMH 434

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
              +  D  T A IL +CA +  L  GKQ+H+  +++    + +  S L+ +Y+KC   +
Sbjct: 435 RAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIK 494

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A ++F  +P  + V WN++I+  + N     A   F+QM  + + P   SF ++L +C+
Sbjct: 495 EALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACS 554

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT--- 573
                                               CG +    Q+F+ M     +    
Sbjct: 555 -----------------------------------HCGLVEEGLQYFNSMTQVYKLEPRR 579

Query: 574 --WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             +  M+    ++G  DEA +L   M     +PD+I + +IL +C
Sbjct: 580 EHYASMVDMLCRSGRFDEAEKLMARM---PFEPDEIMWSSILNSC 621



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 245/530 (46%), Gaps = 74/530 (13%)

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM----- 309
           H Q V    IK GF+ +    N  +  + + GD+ +A  +F  +P ++V+S N M     
Sbjct: 25  HFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYL 84

Query: 310 --------------------------IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
                                     I GY Q  +  +A  L   M   G  PD +T   
Sbjct: 85  KSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLAT 144

Query: 344 ML-----------VACVRSGDIKTGRE------------------------MFDSMPSPS 368
           +L           VA V    +K G +                        +F  M    
Sbjct: 145 LLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKD 204

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
             ++NA+L+ YS+   + +AI LF +MQ  G +P   T A +L++   M  +E G+QVH+
Sbjct: 205 NVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHS 264

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
             +K     + +VA+ L+  YSK  R   A ++F+ +PE+D + +N +I   + N    E
Sbjct: 265 FVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEE 324

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIE 548
           +   F++++       QF FAT+LS  A   +   GRQ+H+Q      ++++ VG++L++
Sbjct: 325 SLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVD 384

Query: 549 MYCKCGDIYGA--RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           MY KC D +G   R F D+ H +++V W  +I GY Q G  ++ ++L+ +M  + +  D 
Sbjct: 385 MYAKC-DKFGEANRIFADLAH-QSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADS 442

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
            T+ +IL AC++   + +G ++ +S  +  G    +   + ++D   + G   EA  +  
Sbjct: 443 ATYASILRACANLASLTLGKQL-HSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQ 501

Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR--LDPKNSAPYSLL 714
           EMP ++  V W  L+S+   + +   A R+ E++    L P + +  S+L
Sbjct: 502 EMPVRNS-VSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSIL 550



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 226/508 (44%), Gaps = 90/508 (17%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H H+++ G      +CN L++ Y K  +   A HLF  M  KD  ++NA+L+   K   
Sbjct: 161 VHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKE-- 218

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                                        G    A++++ KM + GF P+  T A+V  A
Sbjct: 219 -----------------------------GFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              + D+E G++ H  V+K     N++VANALL  Y+K      A  +F EM E + +++
Sbjct: 250 GIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISY 309

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             +++  A   RV E+LE+FR +            +++L + A                 
Sbjct: 310 NVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAAN---------------- 353

Query: 250 FSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
            S N+  G+Q+H   I     +++ + NSL+DMYAK      A  IF++L  +S V W  
Sbjct: 354 -SLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTA 412

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VRS- 351
           +I+GY QK      ++L   M       D  T  ++L AC                +RS 
Sbjct: 413 LISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSG 472

Query: 352 ------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                             G IK   +MF  MP  +  SWNA++S+Y+Q+ +   A++ F 
Sbjct: 473 CLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFE 532

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH---AASLKTASHIDNYVASGLIGIYS 450
           +M   G++P+  +   IL +C+  G++E G Q         K     ++Y +  ++ +  
Sbjct: 533 QMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYAS--MVDMLC 590

Query: 451 KCQRNELAERVFHRIP-ELDIVCWNSMI 477
           +  R + AE++  R+P E D + W+S++
Sbjct: 591 RSGRFDEAEKLMARMPFEPDEIMWSSIL 618



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 188/413 (45%), Gaps = 55/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+ +++     + F+ N L++ YSK +    A+ LF +MP  D  S+N        
Sbjct: 259 GQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNV------- 311

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LI+    NG  E++L ++ ++    F       A++
Sbjct: 312 ------------------------LITCCAWNGRVEESLELFRELQFTRFDRRQFPFATL 347

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              +   L++E GR+ H   I       + V N+L+ +YAKC     A  +F +++  + 
Sbjct: 348 LSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSS 407

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +TA++SG  +     + L++F  M R  +  DS + +S+L  CA              
Sbjct: 408 VPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACA-------------- 453

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+Q+H   I+ G  +++   ++L+DMYAK G +  A  +F  +P R+ VSW
Sbjct: 454 --NLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSW 511

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N +I+ Y Q      A+   ++M   G +P+ V+ +++L AC   G ++ G + F+SM  
Sbjct: 512 NALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQ 571

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                P    + +M+    +S    EA KL   M F   +PD    + IL+SC
Sbjct: 572 VYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPF---EPDEIMWSSILNSC 621



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 174/416 (41%), Gaps = 63/416 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+  +      +  + N L+++Y+KC+    A  +F  + H+    W A       
Sbjct: 360 GRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTA------- 412

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LIS  V+ GL E  L ++ +M          T AS+
Sbjct: 413 ------------------------LISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASI 448

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A   L  +  G++ H  +I+ G   N++  +AL+ +YAKCG  K A+ +F+EM   N 
Sbjct: 449 LRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNS 508

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A++S  A+      AL  F  MI   +  +SVS  S+L  C+   CG+  +     
Sbjct: 509 VSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSH--CGLVEEGL--- 563

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVS 305
                     Q  + +T     E       S++DM  ++G  D AE + + +P E   + 
Sbjct: 564 ----------QYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIM 613

Query: 306 WNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR---SGDIKTGRE 359
           W+ ++     +  +  + KA + L  MK        V+  N+  A       G +K    
Sbjct: 614 WSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALR 673

Query: 360 MFDSMPSPSVS---------SWNAMLSSYSQS-ENHKEAIKLFREMQFRGVKPDRT 405
                  P+ S          ++A  +S+ Q+ E  ++  +L ++M+ +G KPD T
Sbjct: 674 ERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDST 729


>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 200/588 (34%), Positives = 313/588 (53%), Gaps = 57/588 (9%)

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
           L K+  +  AL++ + +    +S   V  +S+L  C +        V A +        H
Sbjct: 93  LCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTK--------VLAFN--------H 136

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNG-DMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           G Q+H   IK G E D  + NSLL +Y K G D      +F  L  + V+SW  MI+GY 
Sbjct: 137 GLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYV 196

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------- 358
           +  +   ++EL  +M + G EP+  T   ++ AC   GD+K GR                
Sbjct: 197 RVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYV 256

Query: 359 -------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF-R 398
                              ++FD +  P    W +++S+ ++++   EA++ F  MQ   
Sbjct: 257 IASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDH 316

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G+ PD  T   +L++C  +G L+ GK+VHA  + T    +  V S L+ +Y KC     +
Sbjct: 317 GMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGES 376

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
           +R+F R+P  + V W++++ G   N         F++M + ++Y     F T+L +CA L
Sbjct: 377 QRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLY----CFGTILRTCAGL 432

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           ++  QG++VH Q  + G   D+ V SAL+++Y KCG I  A+  FD M  +N +TWN MI
Sbjct: 433 AAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMI 492

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            G+AQNG G+EA+R++  M+  G+KPD I+F+ IL ACSH GLVD G E F SM  D+G+
Sbjct: 493 GGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGI 552

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
           +  ++HY+CM+D LGRAG   EAE+LI+    +DD  +W  LL +C    N  +A+R A+
Sbjct: 553 KVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAK 612

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +  L+P     Y LLAN+Y ++GRW+D   +R LM +  + K P  S
Sbjct: 613 RVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKS 660



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 222/480 (46%), Gaps = 57/480 (11%)

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           I  L ++G    AL +   +         +  AS+ +  T +L   HG + H  VIK GL
Sbjct: 90  ILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGL 149

Query: 152 DKNIYVANALLSLYAKCGWT-KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           + + +V N+LL+LY K G        VF+ +   + +++T+M+SG  +  + + +LE+F 
Sbjct: 150 EFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFW 209

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            M+   V  ++ +LS+V+  C+  G           D K  R  HG     + +  GF++
Sbjct: 210 KMLAYGVEPNAFTLSAVIKACSELG-----------DLKLGRIFHG-----VVLGRGFDS 253

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM- 329
           +  ++++L+DM+ +N  +D A  +F  L E   + W  +I+   +     +A+     M 
Sbjct: 254 NYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQ 313

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------------------ 359
           +  G  PD  T   +L AC   G +K G+E                              
Sbjct: 314 RDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSV 373

Query: 360 -----MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                +FD MP  +  SW+A+L  Y Q+ + K  I++FR+M+    K D      IL +C
Sbjct: 374 GESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTC 429

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           A +  +  GK+VH   ++     D  V S L+ +Y+KC   E A+ +F ++P  +++ WN
Sbjct: 430 AGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWN 489

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           SMI G + N    EA   F QM +  + P   SF  +L +C+      +GR+    + KD
Sbjct: 490 SMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKD 549



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 238/528 (45%), Gaps = 111/528 (21%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HAH++++GL  D F+ N L+ LY K                               
Sbjct: 137 GLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGT---------------------------- 168

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D     K+FD +  ++V+SW ++IS  VR G    +L ++ KM   G  P   TL++V
Sbjct: 169 --DFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAV 226

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA + L D++ GR  HG+V+  G D N  +A+AL+ ++ +      A  +F+E+ EP+ 
Sbjct: 227 IKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDA 286

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           + +T+++S L + D   EAL  F  M R   +  D  +  +VL  C   G          
Sbjct: 287 ICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLG---------- 336

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                 R   G++VH   I  GF  ++ + +SL+DMY K G +  ++ IF  +P ++ VS
Sbjct: 337 ------RLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVS 390

Query: 306 WNVMIAGYGQKYQSTKAIELLQRM------------KSC-------------------GF 334
           W+ ++ GY Q       I++ ++M            ++C                   G 
Sbjct: 391 WSALLGGYCQNGDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGG 450

Query: 335 EPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
             D +    ++    + G I+  + +FD MP  ++ +WN+M+  ++Q+   +EA+++F +
Sbjct: 451 WRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQ 510

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQ------------------------VHAAS 430
           M   G+KPD  +   IL +C+  G+++ G++                        +  A 
Sbjct: 511 MVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAG 570

Query: 431 LKTASHI---------DNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           L   + I         D+ + + L+G  + C   E+AER+  R+ EL+
Sbjct: 571 LLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELE 618


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 212/699 (30%), Positives = 361/699 (51%), Gaps = 54/699 (7%)

Query: 86  VSWNNLISALVRNGLEEKALSVYN-KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
           +S N+ I+ + +     +AL  +N    N        T  ++  A T++  +++G++ H 
Sbjct: 122 LSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHD 181

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
            ++K     ++ + N +L++Y KCG  K A   F+ M   N V++T M+SG ++  +  +
Sbjct: 182 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQEND 241

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           A+ M+  M++     D ++  S++  C   G           D    R +HG       I
Sbjct: 242 AIIMYIQMLQSGYFPDPLTFGSIIKACCIAG-----------DIDLGRQLHGH-----VI 285

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           K G++  L   N+L+ MY + G +  A  +F+ +  + ++SW  MI G+ Q     +A+ 
Sbjct: 286 KSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALY 345

Query: 325 LLQRMKSCGF-EPDEVTSINMLVACVRSGDIKTGREM----------------------- 360
           L + M   GF +P+E    ++  AC    + + GR++                       
Sbjct: 346 LFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMY 405

Query: 361 ------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
                       F  + SP + SWNA+++++S S +  EAI  F +M   G+ PD  T  
Sbjct: 406 AKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFL 465

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE- 467
            +L +C +   +  G Q+H+  +K     +  V + L+ +Y+KC     A  VF  + E 
Sbjct: 466 SLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSEN 525

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            ++V WN++++    +    E F  FK M  +E  P   +  T+L +CA+L+S   G QV
Sbjct: 526 ANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQV 585

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H    K G V D+ V + LI+MY KCG +  AR  F      + V+W+ +I GYAQ G G
Sbjct: 586 HCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLG 645

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
            EA+ L++ M   GV+P+++T++ +L+ACSH GLV+ G   +N+M+++ G+ P  +H +C
Sbjct: 646 HEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSC 705

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
           M+D L RAG  +EAE  I +M    D  +W+ LL+SC+ H NV +A+RAAE + +LDP N
Sbjct: 706 MVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSN 765

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           SA   LL+NI++S+G W ++  +R LM +  + K P  S
Sbjct: 766 SAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQS 804



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 177/631 (28%), Positives = 283/631 (44%), Gaps = 86/631 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H HIL++    D  L N ++ +Y KC +                            
Sbjct: 176 GKKIHDHILKSNCQPDLVLQNHILNMYGKCGS---------------------------- 207

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A K FD M  RNVVSW  +IS   +NG E  A+ +Y +M   G+ P  +T  S+
Sbjct: 208 ---LKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSI 264

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA     D++ GR+ HG VIK G D ++   NAL+S+Y + G   HA  VF  +S  + 
Sbjct: 265 IKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDL 324

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +++ +M++G  +    +EAL +FR M R+     +     SV   C            + 
Sbjct: 325 ISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACR-----------SL 373

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            + +F R +HG     +  K G   ++    SL DMYAK G + SA   F  +    +VS
Sbjct: 374 LEPEFGRQIHG-----MCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVS 428

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF---- 361
           WN +IA +       +AI    +M   G  PD +T +++L AC     I  G ++     
Sbjct: 429 WNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYII 488

Query: 362 --------------------------------DSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                           D   + ++ SWNA+LS+  Q +   E  
Sbjct: 489 KIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVF 548

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +LF+ M F   KPD  T+  IL +CA +  LE G QVH  S+K+   +D  V++ LI +Y
Sbjct: 549 RLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMY 608

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC   + A  VF      DIV W+S+I G +   L  EA   F+ M+   + P + ++ 
Sbjct: 609 AKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYL 668

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
            VLS+C+ +    +G   +  +E + G        S ++++  + G +Y A  F   M  
Sbjct: 669 GVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGF 728

Query: 569 KNTVT-WNEMIHGYAQNGYGDEAVRLYKDMI 598
              +T W  ++     +G  D A R  ++++
Sbjct: 729 NPDITMWKTLLASCKTHGNVDIAERAAENIL 759



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 199/387 (51%), Gaps = 25/387 (6%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +++++  ++     K   L  A + F ++   ++VSWN +I+A   +G   +A+  + +M
Sbjct: 393 RNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQM 452

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
            + G +P  IT  S+  A  + + +  G + H  +IKIGLDK   V N+LL++Y KC   
Sbjct: 453 MHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNL 512

Query: 172 KHAVPVFEEMSE-PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
             A  VF+++SE  N V++ A++S   +  +  E   +F+LM+      D+++++++LG 
Sbjct: 513 HDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGT 572

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CA E   +E                G QVHC ++K G   D+ +SN L+DMYAK G +  
Sbjct: 573 CA-ELASLEV---------------GNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKH 616

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A  +F +     +VSW+ +I GY Q     +A+ L + MK+ G +P+EVT + +L AC  
Sbjct: 617 ARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSH 676

Query: 351 SGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
            G ++ G   +++M       P+    + M+   +++    EA    ++M   G  PD T
Sbjct: 677 IGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKM---GFNPDIT 733

Query: 406 TLAIILSSCAAMGILESGKQVHAASLK 432
               +L+SC   G ++  ++     LK
Sbjct: 734 MWKTLLASCKTHGNVDIAERAAENILK 760


>gi|302801247|ref|XP_002982380.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
 gi|300149972|gb|EFJ16625.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
          Length = 730

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 218/761 (28%), Positives = 366/761 (48%), Gaps = 100/761 (13%)

Query: 7   GKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ +H HIL  G F     L N LI++Y KC  T S                        
Sbjct: 17  GRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSS------------------------ 52

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               L  A  +FD+MP+++VVSW+ +I+A  + G   +A++++ +M  E   P  + + S
Sbjct: 53  ----LADARAVFDQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRMDVE---PNEMVIVS 105

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A +   D+  G   H  ++   L K+++V  ALL++YAKCG  + A  VF++M   +
Sbjct: 106 TLAACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKD 165

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++TAM++  A+     +ALE    MI+  V  + V+  + +  C              
Sbjct: 166 VVSWTAMITAFAQMGDCRQALETLEGMIQARVQPNPVTFVAAITAC-------------- 211

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S  +F     G+++H   I LG   D+ + N+L+ MYAK    + A  +F  + +R+ VS
Sbjct: 212 SSREFLDR--GRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVS 269

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN MIA +    QS  A+ L   M   G +PD+V+ + +L AC                 
Sbjct: 270 WNSMIAAFAASAQSCSAMGLFHGMNLEGIKPDDVSFLGVLSACSSTGCLRSCKRIHSQLE 329

Query: 349 --------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + GD++    +F  +P  +V SW AML++Y+   N  +A
Sbjct: 330 LAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKA 389

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           ++L+ +M  + ++PD   L  ++ + + +G +   +++HA    ++  +   + + LI +
Sbjct: 390 LELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNALINM 449

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN--------- 499
           Y++C   E A RVF  I   ++V WN+M+     +  D EA   F +M+           
Sbjct: 450 YARCGSLEEARRVFDGIERKNLVSWNAMMGSYVQHGYDEEAIALFSEMKTGNSKAMESGL 509

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK------DGYVNDIFVGSALIEMYCKC 553
              P       +L + A L    +GR +HA++         G   ++ +G+AL+ MY +C
Sbjct: 510 RSSPDCIMAVILLCAHAGLGKLAEGRCIHAELCAVNPEILAGSTTNVTLGNALVSMYARC 569

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +  A   F  M  ++TVTW+ ++ GYA +G+ + A+ LY+DM   GV+PD +T+V+IL
Sbjct: 570 GSMGDASAAFHHMRARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSIL 629

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
            +CSH+GL+      F SM  DH +    DH+ CM+D LGRAG    AE ++  MP + D
Sbjct: 630 NSCSHAGLLAQARHFFVSMVEDHCLAAWPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQPD 689

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
            V W  LL  C++H + +    AA     + P  +    LL
Sbjct: 690 VVAWNTLLGCCKVHGDAQRGAVAARNAVGISPGFAGSTVLL 730



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDG-YVNDIFVGSALIEMYCKCG---DIYGARQFF 563
           +A++L  C    S   GR+VH  I   G ++  + +G+ LI+MY KCG    +  AR  F
Sbjct: 1   YASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVF 60

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D M  K+ V+W+ +I  Y Q G+  EA+ L++ M    V+P+++  V+ L ACS +  + 
Sbjct: 61  DQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRM---DVEPNEMVIVSTLAACSGAKDLA 117

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           +G+ I   + L   +   +   T +++   + G   +A  + D+MP K D V W  ++++
Sbjct: 118 LGMAIHARI-LSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHK-DVVSWTAMITA 175

Query: 684 CRLHANVRLAKRAAEELF--RLDPKNSAPYSLLANIYSSLGR 723
                + R A    E +   R+ P    P + +A I +   R
Sbjct: 176 FAQMGDCRQALETLEGMIQARVQPN---PVTFVAAITACSSR 214


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 226/781 (28%), Positives = 375/781 (48%), Gaps = 82/781 (10%)

Query: 6    AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            +GK +H  I+  G   D F+   L+ +Y KC     A  +FD      + +         
Sbjct: 579  SGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSA--------- 629

Query: 66   KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                             R+V   N++I    +    ++ +  + +M   G  P   +L+ 
Sbjct: 630  -----------------RDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSI 672

Query: 126  VFKA--STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            V            E G++ HG +++  LD + ++  AL+ +Y K G +  A  VF E+ +
Sbjct: 673  VVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIED 732

Query: 184  P-NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
              N V +  M+ G   ++    +LE++ L    +V + S S +  LG C+          
Sbjct: 733  KSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACS---------- 782

Query: 243  FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
              QS+N    +  G+Q+HC  +K+G + D ++S SLL MY+K G +  AE +FS + ++ 
Sbjct: 783  --QSEN----SAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKR 836

Query: 303  VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-- 360
            +  WN M+A Y +      A+EL   M+     PD  T  N++  C   G    G+ +  
Sbjct: 837  LEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHA 896

Query: 361  ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                             F SM    + +W +++S   ++   KE
Sbjct: 897  ELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKE 956

Query: 388  AIKLFREMQFR--GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            A+K+F +M+     +KPD   +  ++++CA +  L  G QVH + +KT   ++ +V S L
Sbjct: 957  ALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSL 1016

Query: 446  IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
            I +YSKC   E+A +VF  +   +IV WNSMI+  S N+L   +   F  M    ++P  
Sbjct: 1017 IDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDS 1076

Query: 506  FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
             S  +VL + +  +S  +G+ +H    + G  +D  + +ALI+MY KCG    A   F  
Sbjct: 1077 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKK 1136

Query: 566  MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
            M  K+ +TWN MI+GY  +G    A+ L+ ++  +G  PDD+TF+++++AC+HSG V+ G
Sbjct: 1137 MQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEG 1196

Query: 626  VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
               F  M+ D+G+EP ++HY  M+D LGRAG   EA   I  MP + D  IW  LLS+ R
Sbjct: 1197 KNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASR 1256

Query: 686  LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
             H NV L   +AE+L R++P+  + Y  L N+Y   G  ++   +   M E  + K P  
Sbjct: 1257 THHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKERGLQKQPGC 1316

Query: 746  S 746
            S
Sbjct: 1317 S 1317


>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 200/588 (34%), Positives = 313/588 (53%), Gaps = 57/588 (9%)

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
           L K+  +  AL++ + +    +S   V  +S+L  C +        V A +        H
Sbjct: 34  LCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTK--------VLAFN--------H 77

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNG-DMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           G Q+H   IK G E D  + NSLL +Y K G D      +F  L  + V+SW  MI+GY 
Sbjct: 78  GLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYV 137

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------- 358
           +  +   ++EL  +M + G EP+  T   ++ AC   GD+K GR                
Sbjct: 138 RVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYV 197

Query: 359 -------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF-R 398
                              ++FD +  P    W +++S+ ++++   EA++ F  MQ   
Sbjct: 198 IASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDH 257

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G+ PD  T   +L++C  +G L+ GK+VHA  + T    +  V S L+ +Y KC     +
Sbjct: 258 GMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGES 317

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
           +R+F R+P  + V W++++ G   N         F++M + ++Y     F T+L +CA L
Sbjct: 318 QRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLY----CFGTILRTCAGL 373

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           ++  QG++VH Q  + G   D+ V SAL+++Y KCG I  A+  FD M  +N +TWN MI
Sbjct: 374 AAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMI 433

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            G+AQNG G+EA+R++  M+  G+KPD I+F+ IL ACSH GLVD G E F SM  D+G+
Sbjct: 434 GGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGI 493

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
           +  ++HY+CM+D LGRAG   EAE+LI+    +DD  +W  LL +C    N  +A+R A+
Sbjct: 494 KVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAK 553

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +  L+P     Y LLAN+Y ++GRW+D   +R LM +  + K P  S
Sbjct: 554 RVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKS 601



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 222/480 (46%), Gaps = 57/480 (11%)

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           I  L ++G    AL +   +         +  AS+ +  T +L   HG + H  VIK GL
Sbjct: 31  ILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGL 90

Query: 152 DKNIYVANALLSLYAKCGWT-KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           + + +V N+LL+LY K G        VF+ +   + +++T+M+SG  +  + + +LE+F 
Sbjct: 91  EFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFW 150

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            M+   V  ++ +LS+V+  C+  G           D K  R  HG     + +  GF++
Sbjct: 151 KMLAYGVEPNAFTLSAVIKACSELG-----------DLKLGRIFHG-----VVLGRGFDS 194

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM- 329
           +  ++++L+DM+ +N  +D A  +F  L E   + W  +I+   +     +A+     M 
Sbjct: 195 NYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQ 254

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------------------ 359
           +  G  PD  T   +L AC   G +K G+E                              
Sbjct: 255 RDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSV 314

Query: 360 -----MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                +FD MP  +  SW+A+L  Y Q+ + K  I++FR+M+    K D      IL +C
Sbjct: 315 GESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTC 370

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           A +  +  GK+VH   ++     D  V S L+ +Y+KC   E A+ +F ++P  +++ WN
Sbjct: 371 AGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWN 430

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           SMI G + N    EA   F QM +  + P   SF  +L +C+      +GR+    + KD
Sbjct: 431 SMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKD 490



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 238/528 (45%), Gaps = 111/528 (21%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HAH++++GL  D F+ N L+ LY K                               
Sbjct: 78  GLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGT---------------------------- 109

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D     K+FD +  ++V+SW ++IS  VR G    +L ++ KM   G  P   TL++V
Sbjct: 110 --DFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAV 167

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA + L D++ GR  HG+V+  G D N  +A+AL+ ++ +      A  +F+E+ EP+ 
Sbjct: 168 IKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDA 227

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           + +T+++S L + D   EAL  F  M R   +  D  +  +VL  C   G          
Sbjct: 228 ICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLG---------- 277

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                 R   G++VH   I  GF  ++ + +SL+DMY K G +  ++ IF  +P ++ VS
Sbjct: 278 ------RLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVS 331

Query: 306 WNVMIAGYGQKYQSTKAIELLQRM------------KSC-------------------GF 334
           W+ ++ GY Q       I++ ++M            ++C                   G 
Sbjct: 332 WSALLGGYCQNGDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGG 391

Query: 335 EPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
             D +    ++    + G I+  + +FD MP  ++ +WN+M+  ++Q+   +EA+++F +
Sbjct: 392 WRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQ 451

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQV-------------------------HAA 429
           M   G+KPD  +   IL +C+  G+++ G++                           A 
Sbjct: 452 MVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAG 511

Query: 430 SLKTASHI--------DNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
            L+ A  +        D+ + + L+G  + C   E+AER+  R+ EL+
Sbjct: 512 LLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELE 559


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  361 bits (926), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 209/629 (33%), Positives = 320/629 (50%), Gaps = 86/629 (13%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           +N++  N+LLS++AK G    A  VF EM E + V++T M+ GL +  R  EA++    M
Sbjct: 96  RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
                +    +L++VL  CA    G                  G++VH   +KLG  + +
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAV----------------GRKVHSFVVKLGLGSCV 199

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            ++NS+L+MY K GD ++A  +F  +P RSV SWN M+                      
Sbjct: 200 PVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMV---------------------- 237

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                   S+N  +     G +     +F+SMP  S+ SWNAM++ Y+Q+    +A+KLF
Sbjct: 238 --------SLNTHL-----GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 284

Query: 393 -REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
            R +    + PD  T+  +LS+CA +G +  GKQVHA  L+T    ++ V + LI  Y+K
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 344

Query: 452 CQRNELAERV---------------------------------FHRIPELDIVCWNSMIA 478
               E A R+                                 F  +   D+V W +MI 
Sbjct: 345 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 404

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G   N  + EA   F+ M      P  ++ A VLS CA L+    G+Q+H +  +     
Sbjct: 405 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQ 464

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
              V +A+I MY + G    AR+ FD +   K T+TW  MI   AQ+G G+EAV L+++M
Sbjct: 465 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 524

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           + +GV+PD IT+V +L+ACSH+G V+ G   ++ ++ +H + P + HY CM+D L RAG 
Sbjct: 525 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGL 584

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
           F EA+  I  MP + D + W  LLS+CR+H N  LA+ AAE+L  +DP NS  YS +AN+
Sbjct: 585 FSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANV 644

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           YS+ GRW D   + +   E  + K+  +S
Sbjct: 645 YSACGRWSDAARIWKARKEKAVRKETGFS 673



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 156/586 (26%), Positives = 260/586 (44%), Gaps = 131/586 (22%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSK----CNNTHSAQHLFDKMP--HKDIYSWNA 59
           AG+ +HA  ++ GL    +LCN L+  Y +          A+ LFD++P   +++++WN+
Sbjct: 44  AGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNS 103

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           +LS   KS  L  A  +F EMPER+ VSW  ++  L R G   +A+     M+ +GF PT
Sbjct: 104 LLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPT 163

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             TL +V  +         GR+ H  V+K+GL   + VAN++L++Y KCG ++ A  VFE
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFE 223

Query: 180 EM-----------------------------SEPNE--VTFTAMMSGLAKTDRVVEALEM 208
            M                             S P+   V++ AM++G  +     +AL++
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKL 283

Query: 209 F-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKL 266
           F R++   +++ D  +++SVL  CA  G                 NV  G+QVH   ++ 
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLG-----------------NVRIGKQVHAYILRT 326

Query: 267 GFEADLHLSNSLLDMYAKN---------------------------------GDMDSAEV 293
               +  ++N+L+  YAK+                                 GDM+SA  
Sbjct: 327 EMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESARE 386

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----- 348
           +F  +  R VV+W  MI GY Q  ++ +AI+L + M +CG EP+  T   +L  C     
Sbjct: 387 MFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLAC 446

Query: 349 ------------------------------VRSGDIKTGREMFDSMP-SPSVSSWNAMLS 377
                                          RSG     R MFD +       +W +M+ 
Sbjct: 447 LDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIV 506

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH---AASLKTA 434
           + +Q    +EA+ LF EM   GV+PDR T   +LS+C+  G +  GK+ +       + A
Sbjct: 507 ALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIA 566

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
             + +Y    ++ + ++      A+    R+P E D + W S+++ 
Sbjct: 567 PEMSHYAC--MVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSA 610



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 242/501 (48%), Gaps = 60/501 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   G+ +H+ +++ GL     + N ++ +Y KC ++ +A  +F++MP + + SWNA++
Sbjct: 178 QAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMV 237

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTH 120
           S       ++ A  LF+ MP+R++VSWN +I+   +NGL+ KAL ++++M +E    P  
Sbjct: 238 SLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDE 297

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T+ SV  A   L +V  G++ H  +++  +  N  V NAL+S YAK G  ++A  + ++
Sbjct: 298 FTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQ 357

Query: 181 ---------------------------------MSEPNEVTFTAMMSGLAKTDRVVEALE 207
                                            M+  + V +TAM+ G  +  R  EA++
Sbjct: 358 SMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAID 417

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +FR MI      +S +L++VL VCA   C                  +G+Q+HC  I+  
Sbjct: 418 LFRSMITCGPEPNSYTLAAVLSVCASLAC----------------LDYGKQIHCRAIRSL 461

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVSWNVMIAGYGQKYQSTKAIELL 326
            E    +SN+++ MYA++G    A  +F  +  R   ++W  MI    Q  Q  +A+ L 
Sbjct: 462 LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQ 381
           + M   G EPD +T + +L AC  +G +  G+  +D +      +P +S +  M+   ++
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLAR 581

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +    EA +  R M    V+PD      +LS+C      E   ++ A  L +    ++  
Sbjct: 582 AGLFSEAQEFIRRMP---VEPDAIAWGSLLSACRVHKNAELA-ELAAEKLLSIDPNNSGA 637

Query: 442 ASGLIGIYSKCQRNELAERVF 462
            S +  +YS C R   A R++
Sbjct: 638 YSAIANVYSACGRWSDAARIW 658


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 249/789 (31%), Positives = 398/789 (50%), Gaps = 74/789 (9%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH----KDIYSWNAILSAQCKS-- 67
           +++ G+F + +     + +   C    S   LF +  H    K  Y+ +A++S    S  
Sbjct: 93  MVKEGIFSNQYA---FVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMY 149

Query: 68  ----DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                 + +A   F ++  +N VSWN++IS   + G +  A  +++ M  +G  PT  T 
Sbjct: 150 WKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTF 209

Query: 124 ASVFKASTALL--DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            S+   + +L   DV    +    + K GL  +++V + L+S +AK G   +A  VF +M
Sbjct: 210 GSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMF---RLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
              N VT   +M GL +     EA ++F     MI  +     + LSS       E  G+
Sbjct: 270 ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGL 329

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                     K  R VHG   H +T  L  +  + + N L++MYAK G +  A  +F  +
Sbjct: 330 ----------KKGREVHG---HVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------- 349
            ++  VSWN MI G  Q     +A+E  + M+     P   T I+ L +C          
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435

Query: 350 --------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                      +G +   R++F SMP     SWN+++ + ++SE
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE 495

Query: 384 NH-KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               EA+  F   Q  G K +R T + +LS+ +++   E GKQ+H  +LK     +    
Sbjct: 496 RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE 555

Query: 443 SGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
           + LI  Y KC   +  E++F R+ E  D V WNSMI+G   N L  +A      M Q   
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ 615

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
               F +ATVLS+ A +++  +G +VHA   +    +D+ VGSAL++MY KCG +  A +
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VKPDDITFVAILTACSHSG 620
           FF+ M  +N+ +WN MI GYA++G G+EA++L++ M   G   PD +TFV +L+ACSH+G
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           L++ G + F SM   +G+ P ++H++CM D LGRAG   + E  I++MP K + +IW  +
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795

Query: 681 LSSCRLHANVR---LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
           L +C   AN R   L K+AAE LF+L+P+N+  Y LL N+Y++ GRW+DL   R+ M + 
Sbjct: 796 LGAC-CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDA 854

Query: 738 CIVKDPAYS 746
            + K+  YS
Sbjct: 855 DVKKEAGYS 863



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 180/764 (23%), Positives = 329/764 (43%), Gaps = 101/764 (13%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           A +  H+ + +N L  D +LCN LI  Y +  ++ SA+ +FD+MP ++            
Sbjct: 19  AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN------------ 66

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                               VSW  ++S   RNG  ++AL     M  EG         S
Sbjct: 67  -------------------CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVS 107

Query: 126 VFKASTAL--LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC-GWTKHAVPVFEEMS 182
           V +A   +  + +  GR+ HGL+ K+    +  V+N L+S+Y KC G   +A+  F ++ 
Sbjct: 108 VLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIE 167

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV-ESD 241
             N V++ +++S  ++      A  +F  M        S       G      C + E D
Sbjct: 168 VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG----SRPTEYTFGSLVTTACSLTEPD 223

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           V              +Q+ C   K G   DL + + L+  +AK+G +  A  +F+ +  R
Sbjct: 224 VRLL-----------EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDE---------------------- 338
           + V+ N ++ G  ++    +A +L   M S     P+                       
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKG 332

Query: 339 -------VTS-------------INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
                  +T+             +NM   C   G I   R +F  M      SWN+M++ 
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKC---GSIADARRVFYFMTDKDSVSWNSMITG 389

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
             Q+    EA++ ++ M+   + P   TL   LSSCA++   + G+Q+H  SLK    ++
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 449

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI-EAFMFFKQMR 497
             V++ L+ +Y++        ++F  +PE D V WNS+I  L+ +   + EA + F   +
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ 509

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           +      + +F++VLS+ + LS    G+Q+H    K+   ++    +ALI  Y KCG++ 
Sbjct: 510 RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMD 569

Query: 558 GARQFFD-MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
           G  + F  M   ++ VTWN MI GY  N    +A+ L   M+ +G + D   +  +L+A 
Sbjct: 570 GCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAF 629

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           +    ++ G+E+ ++  +   +E  +   + ++D   + G    A    + MP + +   
Sbjct: 630 ASVATLERGMEV-HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYS 687

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           W  ++S    H     A +  E + +LD +    +     + S+
Sbjct: 688 WNSMISGYARHGQGEEALKLFETM-KLDGQTPPDHVTFVGVLSA 730


>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 228/719 (31%), Positives = 359/719 (49%), Gaps = 65/719 (9%)

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S D   A +   + P  + VSWN+LIS   R         ++N +   G  P   +L+S+
Sbjct: 68  SGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSL 127

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K    L   E     HG+ +K+GL  N +V + LL  YAK G    A   F+E    + 
Sbjct: 128 VKGCGVL---EQNEVAHGVCLKMGL-LNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADS 183

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLM--IRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           V +TAM+ G        +  E+F  M  +   + ++  SL+SVLG              A
Sbjct: 184 VVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLG--------------A 229

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGF--EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
            SD +      G+QV  L++K+G      +HL+N+L++MY++ G    A  +F  + E  
Sbjct: 230 LSDVR-----EGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPD 284

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN------------------- 343
           VVSW   I   G  Y + +A EL + + S   E +E   IN                   
Sbjct: 285 VVSWTERI---GAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQG 341

Query: 344 -------MLVACV---------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                  +LVA V         + G++   R +FD M      SWN++++ Y+++   K+
Sbjct: 342 LCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQ 401

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+K+F +M+   ++P++ TLA IL   A     E   Q+H+  +K    +D+ + S LI 
Sbjct: 402 ALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLIT 461

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
            Y KC     ++RV+  I +++++  N+M A L       +A   F+   +        +
Sbjct: 462 AYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCIT 521

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
            + VL +C  L+    GR +H+   K G   D FV SA+I++YCKCG +  A + F  + 
Sbjct: 522 LSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVS 581

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
             N V WN M+ GYAQ+G   E   L+  M+  G++PD+IT++ +L +C H+GLV+    
Sbjct: 582 KNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHT 641

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
             +SM   HGV P L+HY CMID  GR G   +A+  ID+MP   D  IW++LLS C +H
Sbjct: 642 YLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIH 701

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            NV L + AA++L  L P+N + Y LL+N+Y+S GRW+ +  +R +M +  I K+P  S
Sbjct: 702 GNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSS 760



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 155/589 (26%), Positives = 284/589 (48%), Gaps = 58/589 (9%)

Query: 16  RNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYK 75
           R+GL  D F  + L++          A  +  KM   + +  + +L    K  D++ A K
Sbjct: 114 RSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVSGLLDGYAKLGDVDSAEK 173

Query: 76  LFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD 135
            F E    + V W  ++   V NG  EK   V+ +M   G +   +   S+     AL D
Sbjct: 174 CFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLG-LGLELNEFSLTSVLGALSD 232

Query: 136 VEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           V  G +  GL +K+GL    +I++ NAL+++Y++CG    A+ +F+EM+EP+ V++T  +
Sbjct: 233 VREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERI 292

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
              A  D  +EA E+FRL++   + ++   L +VL               A  + K  ++
Sbjct: 293 G--AAYD-AIEAFELFRLVLSGNMEVNEYMLINVLS--------------AMREPKLLKS 335

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+Q+  L  K G+     ++N+L+ MY K G+M +A  IF  +     VSWN +IAGY
Sbjct: 336 --GRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGY 393

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINML-VAC----------VRSGDIKTGREMFD 362
            +     +A+++  +M+    +P++ T  ++L VA           + S  +K G  + D
Sbjct: 394 AENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDD 453

Query: 363 SMPSPSVSSW------------------------NAMLSSYSQSENHKEAIKLFREMQFR 398
           SM S  ++++                        NAM ++   +  H +A+KLF+     
Sbjct: 454 SMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRL 513

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
             + D  TL+I+L +C A+  LE G+ +H+ +LK+    DN+V S +I +Y KC   + A
Sbjct: 514 HQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEA 573

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            + F  + + ++V WN+M+ G + +    E F  F +M +  + P + ++  VL+SC   
Sbjct: 574 AKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHA 633

Query: 519 SSSFQGRQ-VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
               +    + + +E  G V  +   + +I+++ + G +  A++  D M
Sbjct: 634 GLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQM 682



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 150/593 (25%), Positives = 261/593 (44%), Gaps = 65/593 (10%)

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +AS +LL      + + L +K G   + ++++ +++ +A  G    A     +   P+ 
Sbjct: 27  LRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDT 86

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +++SG A+  +     ++F  + R  +S D  SLSS++     +GCGV        
Sbjct: 87  VSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLV-----KGCGVLE------ 135

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                     +  H + +K+G      +S  LLD YAK GD+DSAE  F        V W
Sbjct: 136 --------QNEVAHGVCLKMGLLNGFVVSG-LLDGYAKLGDVDSAEKCFKEFYIADSVVW 186

Query: 307 NVMIAGYGQKYQSTKAIELLQRMK--SCGFEPDE--VTSINMLVACVRSGD------IKT 356
             M+ G+    +  K  E+   M+    G E +E  +TS+   ++ VR G+      +K 
Sbjct: 187 TAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVREGEQVFGLSVKM 246

Query: 357 GR--------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
           G                           +MFD M  P V SW   + +   + +  EA +
Sbjct: 247 GLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGA---AYDAIEAFE 303

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LFR +    ++ +   L  +LS+     +L+SG+Q+     K    +   V + LI +Y 
Sbjct: 304 LFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYG 363

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC     A  +F  +   D V WNS+IAG + N L  +A   F QMR   + P +++ A+
Sbjct: 364 KCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLAS 423

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +L   A  +   Q  Q+H+ I K G++ D  + S LI  Y KC  I  +++ +  +   N
Sbjct: 424 ILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQIN 483

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            +  N M       G   +A++L++       + D IT   +L AC     ++ G  I +
Sbjct: 484 VLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNI-H 542

Query: 631 SMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           SM L  G+    D++  + +ID   + G   EA      +  K++ V W  ++
Sbjct: 543 SMALKSGMSQ--DNFVESAVIDVYCKCGTVDEAAKTFMNVS-KNNLVAWNAMV 592



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 180/372 (48%), Gaps = 24/372 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA++    K  ++  A  +FDEM   + VSWN+LI+    NGL ++AL V+++M +    
Sbjct: 356 NALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQ 415

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   TLAS+ + +      E   + H  ++K+G   +  + + L++ Y KC     +  V
Sbjct: 416 PNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRV 475

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           + ++S+ N +   AM + L       +AL++F+   R    +D ++LS VL  C      
Sbjct: 476 YSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACG----- 530

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                 A +D ++ RN+H      + +K G   D  + ++++D+Y K G +D A   F N
Sbjct: 531 ------ALTDLEYGRNIHS-----MALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMN 579

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           + + ++V+WN M+ GY Q     +  EL  +M   G +PDE+T + +L +C  +G +   
Sbjct: 580 VSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEA 639

Query: 358 REMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                SM       P +  +  M+  + +    ++A +   +M    + PD     I+LS
Sbjct: 640 HTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMP---IMPDAQIWQILLS 696

Query: 413 SCAAMGILESGK 424
            C   G ++ G+
Sbjct: 697 GCNIHGNVDLGE 708



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 132/304 (43%), Gaps = 47/304 (15%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H++I++ G   D  + + LI  Y KCN                           C+S  
Sbjct: 440 IHSYIVKLGFIVDDSMLSCLITAYGKCNMI-------------------------CESK- 473

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                +++ ++ + NV+  N + + LV  G    AL ++            ITL+ V KA
Sbjct: 474 -----RVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKA 528

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
             AL D+E+GR  H + +K G+ ++ +V +A++ +Y KCG    A   F  +S+ N V +
Sbjct: 529 CGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAW 588

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            AM+ G A+     E  E+F  M+   +  D ++   VL  C   G   E+  +  S   
Sbjct: 589 NAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSS--- 645

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS-WNV 308
               +HG  V CL          H +  ++D++ + G ++ A+     +P       W +
Sbjct: 646 -MLELHG-VVPCLE---------HYA-CMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQI 693

Query: 309 MIAG 312
           +++G
Sbjct: 694 LLSG 697



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 19/207 (9%)

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
           + GL+ +S   +A    K +    +YP        L + A L       Q +A   K G+
Sbjct: 1   MKGLATHS---DALQSIKTLVLKRLYPQ------ALRASASLLHPPLTDQSYALFLKSGF 51

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
             D F+ S ++  +   GD   AR+F       +TV+WN +I GYA+         L+  
Sbjct: 52  ALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNG 111

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG--VEPILDHYTCMIDCLGR 654
           +  SG+ PD+ +  +++  C      +V   +   M L +G  V  +LD Y        +
Sbjct: 112 LRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVSGLLDGYA-------K 164

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            G    AE    E    D  V+W  ++
Sbjct: 165 LGDVDSAEKCFKEFYIADS-VVWTAMV 190



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/117 (22%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+  L++G+  D F+ + +I++Y KC     A   F  +   ++ +WNA++    +
Sbjct: 538 GRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQ 597

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSN-EGFVP 118
                  ++LF++M E  +    +++  ++++    GL  +A +  + M    G VP
Sbjct: 598 HGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVP 654


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 210/701 (29%), Positives = 365/701 (52%), Gaps = 57/701 (8%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D +  NA+++A  K   +  AY++F  M   +VVS++ LIS+  +   E +A+ ++ +M
Sbjct: 135 EDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRM 194

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
              G  P   +  ++  A    L++E G + H L IK+G  + ++VANAL+ LY KCG  
Sbjct: 195 RISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCL 254

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGV 230
            HA+ +F+EM + +  ++  M+S L K     +ALE+FR++ + K    D  +LS++L  
Sbjct: 255 DHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTA 314

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CAR  C                 + G+++H   I++G E +L +SN+++  Y + G ++ 
Sbjct: 315 CAR--CHAR--------------IQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNH 358

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
              +F  +P R +++W  MI  Y                                   + 
Sbjct: 359 VAALFERMPVRDIITWTEMITAY-----------------------------------ME 383

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
            G +    +MF+ MP  +  S+NA+L+ + ++    +A+ LF  M   G +    TL  +
Sbjct: 384 FGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGV 443

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE--L 468
           +++C  +  LE  +Q+H   +K     +  + + LI + SKC R + A+R+F  +     
Sbjct: 444 INACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGG 503

Query: 469 DIVCWNSMIAGLSLNSLDIEAF-MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
           + +   SMI G + N L  EA  +F++   +  M   + +F ++L  C  L     G+Q+
Sbjct: 504 NSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQI 563

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H Q  K G+  ++ VG+++I MY KC +I  A + F+ M G + V+WN +I G   +  G
Sbjct: 564 HCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQG 623

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTA--CSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
           DEA+ ++  M  +G+KPD ITFV I++A   + S L+D    +F SM++ H +EP  +HY
Sbjct: 624 DEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHY 683

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
             ++  LG  G   EAE LI++MP   +  +W  LL  CRLHAN  + KR A+ +  ++P
Sbjct: 684 ASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEP 743

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++ + Y L++N+Y++ GRW     VRE M +  + K P  S
Sbjct: 744 RDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRS 784



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 221/434 (50%), Gaps = 29/434 (6%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + G+ +HA+ +R GL ++  + N +I  Y++C + +    LF++MP +DI +W  +++
Sbjct: 320 ARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMIT 379

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
           A  +   ++ A  +F++MPE+N VS+N L++   +N    KAL+++ +M  EG   T  T
Sbjct: 380 AYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFT 439

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L  V  A   LL +E  R+ HG +IK G   N  +  AL+ + +KCG    A  +F+ +S
Sbjct: 440 LTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLS 499

Query: 183 EP--NEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
               N +  T+M+ G A+     EA+ +F R      + +D V+ +S+LGVC   G    
Sbjct: 500 TDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLG---- 555

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
              F +          G+Q+HC  +K GF A+L + NS++ MY+K  ++D A   F+ +P
Sbjct: 556 ---FHEV---------GKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMP 603

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--CVRSGDIKTG 357
              VVSWN +IAG     Q  +A+ +   M+  G +PD +T + ++ A     S  +   
Sbjct: 604 GHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDEC 663

Query: 358 REMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           R +F SM       P+   + +++         +EA +L  +M F    P+ +    +L 
Sbjct: 664 RSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPF---DPEVSVWRALLD 720

Query: 413 SCAAMGILESGKQV 426
            C        GK+V
Sbjct: 721 GCRLHANTSIGKRV 734



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 140/561 (24%), Positives = 242/561 (43%), Gaps = 139/561 (24%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA  ++ G     F+ N LI LY KC     A HLFD+MP +DI SWN        
Sbjct: 222 GLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWN-------- 273

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITLAS 125
                                   +IS+LV+    EKAL ++  ++ N+GF     TL++
Sbjct: 274 -----------------------TMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLST 310

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------------- 169
           +  A         GR  H   I+IGL+ N+ V+NA++  Y +CG                
Sbjct: 311 LLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRD 370

Query: 170 ---WTKH------------AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              WT+             AV +F +M E N V++ A+++G  K +  ++AL +F  M++
Sbjct: 371 IITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQ 430

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
           +   +   +L+ V+  C   G  ++ ++        SR +HG       IK GF ++  +
Sbjct: 431 EGAELTDFTLTGVINAC---GLLLKLEI--------SRQIHG-----FIIKFGFRSNACI 474

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPE---RSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
             +L+DM +K G MD A+ +F +L      S++  + MI GY +     +AI L  R +S
Sbjct: 475 EAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTS-MICGYARNGLPEEAICLFYRCQS 533

Query: 332 CG-FEPDEVTSINMLVACVRSGDIKTGREM------------------------------ 360
            G    DEV   ++L  C   G  + G+++                              
Sbjct: 534 EGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNID 593

Query: 361 -----FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS-- 413
                F++MP   V SWN +++         EA+ ++  M+  G+KPD  T  +I+S+  
Sbjct: 594 DAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYK 653

Query: 414 ---------CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
                    C ++ +  S K +H     T+ H      + L+G+       E AE + ++
Sbjct: 654 FTSSNLLDECRSLFL--SMKMIHDLE-PTSEHY-----ASLVGVLGYWGLLEEAEELINK 705

Query: 465 IP-ELDIVCWNSMIAGLSLNS 484
           +P + ++  W +++ G  L++
Sbjct: 706 MPFDPEVSVWRALLDGCRLHA 726


>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 222/783 (28%), Positives = 399/783 (50%), Gaps = 59/783 (7%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK----DIYSWNA 59
           H A  L H  IL+ GL  D F  N +++  +   + H   +++  +       D+Y   +
Sbjct: 81  HKAINLYHT-ILKIGLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTS 139

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           ++   CK   L+ A  +FD+MP ++ V WN +IS L ++    +AL ++ +M  EGF   
Sbjct: 140 LIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVD 199

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
            +++ ++  A + L DV   +  HG V++  +     V+N+L+ +Y KCG    A  VF+
Sbjct: 200 KVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG--VVSNSLIDMYCKCGDVHSAQRVFD 257

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            M   ++V++  MM+G  K     E L++   M R  V ++ V++ + L V   E   +E
Sbjct: 258 RMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLV-VAEMRDLE 316

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                           G++++   +++G  +D+ ++  ++ MYAK G++  A  +F +L 
Sbjct: 317 K---------------GKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLE 361

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            R +V+W+  ++   +     + + + Q M+  G +PD+     ++  C    +I  G+ 
Sbjct: 362 GRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKI 421

Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
           M                                   F+ M    +  WN +++ +++  +
Sbjct: 422 MHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGD 481

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
              A+++F  +Q  G+ PD  T+  + S+CA M  L+ G  +H    K+    D +V   
Sbjct: 482 PHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVA 541

Query: 445 LIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           L+ +Y+KC      ER+F     + D V WN MIAG   N    EA   F++M+   + P
Sbjct: 542 LMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRP 601

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              +F T+L + + LS   +    H  I + G+++   +G++LI+MY KCG +  + + F
Sbjct: 602 NLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCF 661

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
             M  K+T++WN M+  YA +G G+ AV L+  M  S V+ D ++++++L+AC HSGL+ 
Sbjct: 662 HEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQ 721

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G +IF SM   H VEP ++HY CM+D LG AG F E   L+++M  + D  +W  LL++
Sbjct: 722 EGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAA 781

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           C++H+NV L + A   L +L+P+N   + +L++IY+  GRW+D R  R  ++ + + K P
Sbjct: 782 CKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIP 841

Query: 744 AYS 746
            YS
Sbjct: 842 GYS 844



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 186/701 (26%), Positives = 337/701 (48%), Gaps = 57/701 (8%)

Query: 30  IELY-SKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSW 88
           I+L+ SK +N+    H+F      +   +  ++++    + L   +  F ++   +++ +
Sbjct: 8   IKLFTSKHSNSLHTHHIFPIQQQNNNNHYLKLINSCKYINPLLQIHTHFLQIKNPSLILY 67

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           N+ I A  +     KA+++Y+ +   G  P   T   V KA T+ LD   G   +  ++ 
Sbjct: 68  NSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVF 127

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
            GL+ ++Y+  +L+ ++ K G   +A  VF++M   + V + AM+SGL+++    EALEM
Sbjct: 128 NGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEM 187

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
           F  M  +   +D VS+ ++    +R G           D    +++HG  V      +  
Sbjct: 188 FWRMQMEGFEVDKVSILNLAPAVSRLG-----------DVGCCKSIHGYVVRRSICGV-- 234

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
                +SNSL+DMY K GD+ SA+ +F  +  R  VSW  M+AGY +     + ++LL +
Sbjct: 235 -----VSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHK 289

Query: 329 MK-----------------------------------SCGFEPDEVTSINMLVACVRSGD 353
           M+                                     G   D V +  ++    + G+
Sbjct: 290 MRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGE 349

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           +K  RE+F S+    + +W+A LS+  ++   +E + +F+ MQ+ G+KPD+  L+I++S 
Sbjct: 350 LKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSG 409

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           C  +  +  GK +H  ++K     D  + + L+ +Y + +    A  +F+R+   DIV W
Sbjct: 410 CTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVW 469

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           N++I G +       A   F +++ + + P   +   + S+CA +     G  +H  IEK
Sbjct: 470 NTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEK 529

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVR 592
            G+ +DI V  AL++MY KCG +    + F +  H K+ V+WN MI GY  NGY +EA+ 
Sbjct: 530 SGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAIS 589

Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
            ++ M    V+P+ +TFV IL A S+  ++   +  F++  +  G          +ID  
Sbjct: 590 TFRRMKLENVRPNLVTFVTILPAVSYLSILREAMA-FHTCIIRMGFLSCTLIGNSLIDMY 648

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
            + G    +E    EM  K D + W  +LS+  +H    LA
Sbjct: 649 AKCGQLRYSEKCFHEMENK-DTISWNAMLSAYAMHGQGELA 688


>gi|224106537|ref|XP_002314200.1| predicted protein [Populus trichocarpa]
 gi|222850608|gb|EEE88155.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 239/786 (30%), Positives = 377/786 (47%), Gaps = 93/786 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+ + G  +H +I++ G   D F+ N LI+ Y+K                       A+L
Sbjct: 67  KSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAK----------------------GAVL 104

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                     + + +FD M ERNVVSW  ++   ++    E  L V+ +M  +GFVP   
Sbjct: 105 ---------RYGFNVFDGMLERNVVSWTLMVCGAIQCEEVELGLEVFLEMIRDGFVPNEF 155

Query: 122 TLASVFKASTALLDVE-HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            L SV KA    ++    G   H   +KIG+++N +V+ ++LS YAK G    A  VFE 
Sbjct: 156 GLGSVMKACGNSVEGRVFGLCVHCFALKIGMERNPFVSCSVLSFYAKLGDIGAAERVFES 215

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           + E +   + AM+ G A+     EA+    LM RK + +D  +  +V+  C+  G     
Sbjct: 216 LEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRKGIFMDKYTFINVIQGCSLLG----- 270

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                 D  F R +HG     L I+   E    + N+L+DMY KNG M S  V+F  + +
Sbjct: 271 ------DFNFGRQIHG-----LIIRSELELSAPVMNALMDMYFKNGGMKSGLVVFKKMHD 319

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIE------LLQRMK-----------SCG---------- 333
           R VV+WN +   + Q ++  K I       LL  M+            CG          
Sbjct: 320 RDVVTWNTVFGSFSQ-HEDPKDIASLFHSFLLTSMRPNHITFSILFRECGKLLNLDLGLQ 378

Query: 334 ----------FEPDEVTS--INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                     F+   +TS  INM   C   G ++    +F S  S ++  WN ++S Y  
Sbjct: 379 FCCLALHFGLFDEANITSALINMFSRC---GKMEMAHLVFKSKVSENIIIWNELISGYKL 435

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +    EA+K F ++   GV+ +  T + +L +C+        +Q+H  + K+      YV
Sbjct: 436 NCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSGFASHGYV 495

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            S LI  Y KC   + + +VF+ +   D+  W +MI+       D EA      + +   
Sbjct: 496 CSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRSLNLLIEAGE 555

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P +F   ++LSSCA   +  Q + VH+ I K G+   +FV SA+++ Y KCGDI  A+ 
Sbjct: 556 KPDEFILGSILSSCASTVAYCQTKSVHSLIIKLGFEGHVFVASAVLDAYAKCGDIQSAKM 615

Query: 562 FFDM-MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
            F+      + V +N MI  YA +G   EA+  Y  M  + ++P   TFV+++ AC H G
Sbjct: 616 AFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQATFVSVIAACGHIG 675

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
            V+ G  +F SM L +G+EP  D Y C++D   R G+  +A+ +I+ +P    P I   L
Sbjct: 676 HVEKGCRLFKSMDL-YGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESLPYPAWPAILRSL 734

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           LS CR++ N  L + AA++L +L P N A ++LL  +YS LG W+D   +R  M+E  + 
Sbjct: 735 LSGCRMYGNRELGEWAAKKLLQLVPHNDAAHALLFKVYSELGNWEDAAKMRREMAERGLR 794

Query: 741 KDPAYS 746
           KDP +S
Sbjct: 795 KDPGHS 800



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 191/436 (43%), Gaps = 52/436 (11%)

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           DSV+LS  L  C             ++   F   + G Q+H   IKLGF +D+ +SN+L+
Sbjct: 52  DSVALSKALSFC-------------ENSKSF---ILGTQIHGYIIKLGFSSDVFVSNNLI 95

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
             YAK   +     +F  + ER+VVSW +M+ G  Q  +    +E+   M   GF P+E 
Sbjct: 96  KFYAKGAVLRYGFNVFDGMLERNVVSWTLMVCGAIQCEEVELGLEVFLEMIRDGFVPNEF 155

Query: 340 TSINMLVACVRS------------------------------------GDIKTGREMFDS 363
              +++ AC  S                                    GDI     +F+S
Sbjct: 156 GLGSVMKACGNSVEGRVFGLCVHCFALKIGMERNPFVSCSVLSFYAKLGDIGAAERVFES 215

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +    V  WNAM+  Y+Q     EAI     M+ +G+  D+ T   ++  C+ +G    G
Sbjct: 216 LEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRKGIFMDKYTFINVIQGCSLLGDFNFG 275

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           +Q+H   +++   +   V + L+ +Y K    +    VF ++ + D+V WN++    S +
Sbjct: 276 RQIHGLIIRSELELSAPVMNALMDMYFKNGGMKSGLVVFKKMHDRDVVTWNTVFGSFSQH 335

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               +    F       M P   +F+ +   C KL +   G Q        G  ++  + 
Sbjct: 336 EDPKDIASLFHSFLLTSMRPNHITFSILFRECGKLLNLDLGLQFCCLALHFGLFDEANIT 395

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           SALI M+ +CG +  A   F     +N + WNE+I GY  N    EA++ + D++  GV+
Sbjct: 396 SALINMFSRCGKMEMAHLVFKSKVSENIIIWNELISGYKLNCCDAEALKTFYDLLQLGVE 455

Query: 604 PDDITFVAILTACSHS 619
            ++ TF  +L  CS S
Sbjct: 456 ANEYTFSNVLETCSRS 471



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 9/234 (3%)

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           +  D   L+  LS C        G Q+H   +K     D +V++ LI  Y+K        
Sbjct: 49  IGKDSVALSKALSFCENSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGF 108

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            VF  + E ++V W  M+ G ++   ++E     F +M ++   P +F   +V+ +C   
Sbjct: 109 NVFDGMLERNVVSWTLMVCG-AIQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACG-- 165

Query: 519 SSSFQGRQ----VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
            +S +GR     VH    K G   + FV  +++  Y K GDI  A + F+ +   +   W
Sbjct: 166 -NSVEGRVFGLCVHCFALKIGMERNPFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCW 224

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           N MI GYAQ GYG EA+     M   G+  D  TF+ ++  CS  G  + G +I
Sbjct: 225 NAMIGGYAQCGYGFEAIVTASLMRRKGIFMDKYTFINVIQGCSLLGDFNFGRQI 278


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 211/654 (32%), Positives = 351/654 (53%), Gaps = 63/654 (9%)

Query: 135 DVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE-VTFTAM 192
           D+  GR  H  +++   LD +  VAN+LL++Y+KCG  + A  VF++M    + V++TAM
Sbjct: 55  DLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAM 114

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
            S LA+     E+L +   M+   +  ++ +L           C      F Q   + + 
Sbjct: 115 ASCLARNGAERESLRLLGEMLELGLRPNAFTL-----------CAAARACFPQELFRLA- 162

Query: 253 NVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
              G  V    +K GF   D+ +  +L+DM+A+NGD+ +A+ +F  L ER+ V W ++I 
Sbjct: 163 ---GGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLIT 219

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG-------------- 357
            Y Q   ++K +EL   M   GFEPD  +  +M+ AC   G ++ G              
Sbjct: 220 RYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVS 279

Query: 358 ------------------------REMFDSMPSPSVSSWNAMLSSYSQSE-NHKEAIKLF 392
                                   R++F +MP  +V SW A++S Y QS       + LF
Sbjct: 280 DSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALF 339

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           REM    ++P+  T + +L +CA +   +SG+Q+HA  LKT+    N V + L+ +Y++ 
Sbjct: 340 REMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAES 399

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              E A + F ++ E +I+   SM   +     +       + M       + F+FA++L
Sbjct: 400 GCMEEARKAFDQLYETNIL---SMSPDVETERNNASCSSKIEGMDDG---VSTFTFASLL 453

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           S+ A +    +G+++HA   K G+ +D  + ++L+ MY +CG +  A + FD M   N +
Sbjct: 454 SAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVI 513

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +W  +I G A++GY  +A+ ++ DMI +GVKP+D+T++A+L+ACSH GLV  G E F SM
Sbjct: 514 SWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSM 573

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
           Q DHG+ P ++HY C++D L R+G   EA   I+EMPCK D ++W+ LLS+CR + N  +
Sbjct: 574 QKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEI 633

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + AA  +  L+P++ APY LL+N+Y+  G WD++  +R LM +  + K+   S
Sbjct: 634 GEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLS 687



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 160/626 (25%), Positives = 288/626 (46%), Gaps = 92/626 (14%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ LH  +LR+ + D D  + N L+ +YSKC                             
Sbjct: 59  GRALHRRLLRSEILDTDAVVANSLLTMYSKCGA--------------------------- 91

Query: 66  KSDDLEFAYKLFDEM-PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
               +E A ++FD+M   R++VSW  + S L RNG E ++L +  +M   G  P   TL 
Sbjct: 92  ----VEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLC 147

Query: 125 SVFKA--STALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           +  +A     L  +  G    G V+K G    ++ V  AL+ ++A+ G    A  VF+ +
Sbjct: 148 AAARACFPQELFRLAGG-VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGL 206

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E   V +T +++   +     + +E+F  M+      D  S+SS++  C   G      
Sbjct: 207 IERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELG------ 260

Query: 242 VFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIFSN 297
                      +V  GQQ+H + ++LG  +D  +S  L+DMYAK      M+ A  +F  
Sbjct: 261 -----------SVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKT 309

Query: 298 LPERSVVSWNVMIAGYGQK-YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
           +P  +V+SW  +I+GY Q   Q    + L + M +    P+ +T  N+L AC    D  +
Sbjct: 310 MPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDS 369

Query: 357 GREMFDSMPSPSVSS----WNAMLSSYSQSENHKEAIKLF---REMQFRGVKPD------ 403
           GR++   +   S++      NA++S Y++S   +EA K F    E     + PD      
Sbjct: 370 GRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERN 429

Query: 404 ----------------RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
                             T A +LS+ A++G+L  G+++HA S+K     D  +++ L+ 
Sbjct: 430 NASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVS 489

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y++C   E A R F  + + +++ W S+I+GL+ +    +A   F  M    + P   +
Sbjct: 490 MYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVT 549

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +  VLS+C+ +    +G++    ++KD G +  +   + ++++  + G +  ARQF + M
Sbjct: 550 YIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEM 609

Query: 567 HGK-NTVTWNEMIHGYAQNGYGDEAV 591
             K + + W  ++   A   YG+  +
Sbjct: 610 PCKADALVWKTLLS--ACRTYGNTEI 633



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 4/225 (1%)

Query: 408 AIILSSCAAMGILESGKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
           A +L+S A  G L  G+ +H   L++     D  VA+ L+ +YSKC   E A RVF ++ 
Sbjct: 44  AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMC 103

Query: 467 EL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC-AKLSSSFQG 524
            + D+V W +M + L+ N  + E+     +M +  + P  F+      +C  +      G
Sbjct: 104 GVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAG 163

Query: 525 RQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
             V   + K G+   D+ VG ALI+M+ + GD+  A++ FD +  + +V W  +I  Y Q
Sbjct: 164 GVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQ 223

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            G   + V L+  M+  G +PD  +  ++++AC+  G V +G ++
Sbjct: 224 AGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQL 268


>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
 gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
          Length = 921

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 208/693 (30%), Positives = 340/693 (49%), Gaps = 65/693 (9%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
            E A ++F+ + +R+VV W   I+A V +G    AL ++ KM  EG    ++T + +  A
Sbjct: 251 FEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAA 310

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            + L D E G+     +  +GL+ +  + + +LSL+A+CG       +F+ M     VT+
Sbjct: 311 CSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTW 370

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           T M++   +    +EALE++  M    +  D ++LS+VL  C+R                
Sbjct: 371 TTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSR---------------- 411

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+ VH       FE  L +   L+DMY K GD+  A   F     R V+SW  +
Sbjct: 412 LKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSL 471

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------- 360
           I  Y  +    +A+E+   M+  G EP+ +T   ++ AC R   +  GR +         
Sbjct: 472 ITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGH 531

Query: 361 --------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                     FDS+P     SW  ML + +Q+ +  EA++++  
Sbjct: 532 ISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSR 591

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +   G +P     +  L SC A+  +   + +H     +  + D  +++ L+ +Y+KC  
Sbjct: 592 IHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGE 651

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E A  VF ++ E + V W +MI G + N    EA   +K M   ++ P   +F  V+SS
Sbjct: 652 LEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAM---DVQPNFIAFVPVISS 708

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           CA L +  +G++VHA++   G  N+  + +AL+ MY KCG +  AR+FFD  +  +   W
Sbjct: 709 CADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAW 768

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N M   YAQ G+G + + LY++M   GV+P+ IT +++L ACSH G+++     F  M  
Sbjct: 769 NSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVA 828

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD-----DPV---IWEVLLSSCRL 686
           DHG+ P  +HY+CM D LGR+G   EAE ++     +       PV    W   L +C+ 
Sbjct: 829 DHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKT 888

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           H +   A  AAE+L+ LDP++SAPY LL+  YS
Sbjct: 889 HNDWGRAAGAAEKLYELDPEDSAPYVLLSQTYS 921



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 205/771 (26%), Positives = 338/771 (43%), Gaps = 129/771 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN-------- 58
           GK +H  I  +    DT L N L+ LY+KC +   ++ +F+ M  + + +WN        
Sbjct: 18  GKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQ 77

Query: 59  ------------------------AILSAQCKSDDLEF---------------------- 72
                                   ++L A C  DDLE                       
Sbjct: 78  HDFFQEALEAFRRMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGASSPQIQADEILQ 137

Query: 73  ---------------AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
                          A ++F  +  +N  SW  +I+A  +NG E +A+ V+  M +EG V
Sbjct: 138 NSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRV 197

Query: 118 -PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
            P  IT A V  A + L D+E G R H L+   G++  + V+  L+ LY K G+ + A+ 
Sbjct: 198 EPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVESAM-VSTGLIDLYGKWGFFEDALQ 256

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VFE + + + V +TA ++      +   ALE+FR M  + +  ++V+ S +L  C     
Sbjct: 257 VFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAAC----- 311

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                      +       G+ +      LG E D  L + +L ++A+ G +     +F 
Sbjct: 312 -----------SNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFD 360

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------- 348
            +P R+VV+W  MIA Y Q+  S +A+EL   M     EPD++   N+L AC        
Sbjct: 361 RMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMD---IEPDDIALSNVLQACSRLKNLEQ 417

Query: 349 ---------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                                      V+ GD+   R  FD   +  V SW +++++YS 
Sbjct: 418 GRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSH 477

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
               +EA+++F  M+  GV+P+  T   ++ +C+ +  L  G+ +H+  + T    D +V
Sbjct: 478 ENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFV 537

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + L+ +YSK  R + A  VF  IP      W  M+  L+ N    EA   + ++     
Sbjct: 538 GNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGF 597

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P    F+  L SC  L    + R +H  I+   +  D+ + + L+ +Y KCG++  AR 
Sbjct: 598 RPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARL 657

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            FD M  KN V+W  MI GYAQNG   EA+ LYK M    V+P+ I FV ++++C+  G 
Sbjct: 658 VFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAM---DVQPNFIAFVPVISSCADLGA 714

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           +  G  +   +  D G++      T +++   + G    A    D   C D
Sbjct: 715 LVEGQRVHARLS-DAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPD 764



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 160/597 (26%), Positives = 280/597 (46%), Gaps = 61/597 (10%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T A V  A   L D+E G++ H  + +     +  + NALL+LYAKCG  + +  +FE M
Sbjct: 1   TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
                 T+  M++   + D   EALE FR   R      S++ +SVLG C          
Sbjct: 61  ERRTVATWNTMITAYVQHDFFQEALEAFR---RMDAPPSSITFTSVLGACC--------- 108

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
             +  D +  + +H +Q+   + ++  +AD  L NSL+ MY K G ++ AE +F  +  +
Sbjct: 109 --SPDDLETGKAIH-RQIGASSPQI--QADEILQNSLVTMYGKCGSLEDAERVFHGIRRK 163

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGR-- 358
           +  SW  MI  Y Q     +AIE+   M S G  EPD +T   +L AC   GD++TG   
Sbjct: 164 NAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRI 223

Query: 359 --------------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                           ++F+S+    V  W A +++        
Sbjct: 224 HALIRSKGVESAMVSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSG 283

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
            A++LFR+M+  G++ +  T + IL++C+ +   E+GK +           D+ +  G++
Sbjct: 284 FALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGIL 343

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            ++++C        +F R+P   +V W +MIA  +     +EA   +  M   ++ P   
Sbjct: 344 SLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDI 400

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           + + VL +C++L +  QGR VH++I    +   + V + L++MY KCGD+  AR+ FD  
Sbjct: 401 ALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGF 460

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++ ++W  +I  Y+   +G EA+ ++  M   GV+P+ ITF  ++ ACS    +  G 
Sbjct: 461 KARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGR 520

Query: 627 EIFNSMQLDHGVEPILDHYT--CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            + + +        I D +    ++    + G    A ++ D +P K  P  W V+L
Sbjct: 521 ALHSRVV---ATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPS-WRVML 573



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 156/300 (52%), Gaps = 13/300 (4%)

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T A +LS+CA +  +E GK+VH    ++ + +D  + + L+ +Y+KC   E + R+F  +
Sbjct: 1   TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
               +  WN+MI     +    EA   F++M   +  P+  +F +VL +C        G+
Sbjct: 61  ERRTVATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPDDLETGK 117

Query: 526 QVHAQIEKDG--YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
            +H QI         D  + ++L+ MY KCG +  A + F  +  KN  +W  MI  YAQ
Sbjct: 118 AIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQ 177

Query: 584 NGYGDEAVRLYKDMIASG-VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           NGY   A+ ++ DM++ G V+PD IT+  +LTACS  G ++ G+ I +++    GVE  +
Sbjct: 178 NGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRI-HALIRSKGVESAM 236

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
              T +ID  G+ G F +A  + + +  + D VIW   +++C  H     A     ELFR
Sbjct: 237 VS-TGLIDLYGKWGFFEDALQVFESVRDR-DVVIWTAFIAACVYHGQSGFAL----ELFR 290



 Score = 42.7 bits (99), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 38/150 (25%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V G+ +HA +   GL ++  +   L+ +Y+KC     A+  FD     D  +WN++ +
Sbjct: 714 ALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMAT 773

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                     AY  F                     G   + L +Y +M  +G  P  IT
Sbjct: 774 ----------AYAQF---------------------GHGSQVLELYREMCLQGVQPNGIT 802

Query: 123 LASVFKAST---ALLDVEHGRRC----HGL 145
           L SV  A +    L + EH   C    HG+
Sbjct: 803 LLSVLVACSHMGMLEECEHRFECMVADHGI 832


>gi|302817567|ref|XP_002990459.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
 gi|300141844|gb|EFJ08552.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
          Length = 830

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 224/766 (29%), Positives = 377/766 (49%), Gaps = 74/766 (9%)

Query: 7   GKLLHAHILRNGLFDDTFLCNR--LIELYSKCNNTHSAQHLFDKMPHKDI----YSWN-- 58
           G L  A  L + + D+  + +R  L+ + + C+ + S      +  H+ I    + W+  
Sbjct: 88  GHLQEATGLFHRMLDEGVVPDRVTLLTVINACSESGSLAE--GRRVHRRIQGSDFEWSVD 145

Query: 59  ---AILSAQCKSDDLEFAYKLFD-EMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
              A++    K   ++ A ++FD  +  +N+VSW  ++SA V  G  E+AL+++ +M  E
Sbjct: 146 VGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYVERGCLEQALTLFIEMLQE 205

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G  P  IT  SV  A     D++ GR+ H L+ + GLD + +V NAL+ +Y +CG  + A
Sbjct: 206 GVAPNEITYVSVLNAC----DLDAGRKVHRLIEQSGLDSDAFVGNALIKMYRRCGSLEDA 261

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             VF+ +++ N + + +M++G A  +     LE FR M+      D  +L +VL  CA+ 
Sbjct: 262 SLVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKMLLDGWKGDKHTLLTVLDACAKS 321

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
                S +              Q +H L ++ G ++D  +  +L+ + ++ GD  SA+++
Sbjct: 322 STLQASSL--------------QTIHDLAVESGLDSDTLVGTALVKIKSEQGDRKSAKMV 367

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD- 353
           F +L  + + +WN M + Y +  +   A+EL ++MK     PD+VT +++L AC  +G  
Sbjct: 368 FDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILSACTATGSS 427

Query: 354 --IKTGRE-----------------------------------MFDSMPSPSVSSWNAML 376
             ++TG++                                   +F+ M S  + SW  ML
Sbjct: 428 LGLETGKKTHEEILEQGYRLDAVLGTALVRMYAACGRLDDAKLVFEKMESRDLISWTTML 487

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
            +Y+Q+    EA   FR +Q  G  PDR  L   L +C     L S +  H    +    
Sbjct: 488 GAYTQARLLDEASITFRRIQLEGHTPDRVALIAALGACTN---LSSARDFHERIRQLGWE 544

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D  VA+ L+ +YS C   E A   F  I E  ++ WN +IA  +       AF   + M
Sbjct: 545 KDPLVANALLEVYSACGSLEDANETFDGIGEPSVISWNLLIAAHTRLGHPDRAFDLLRAM 604

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
                 P   + ATV++S A L    +G+ +H  I + G   D  V +AL+  Y KCGD 
Sbjct: 605 ELQGHNPDSVTLATVINSRASLQLFRKGKIIHDSILEAGMEIDSVVATALVNFYGKCGDF 664

Query: 557 YGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
             AR  F  +    N VTWN  +  YAQ+G+  EA+ +  +M+  GV P  +TFV++L+ 
Sbjct: 665 ATARSIFQGVGAADNVVTWNSTLAAYAQSGHASEALHVLAEMVQQGVAPTAVTFVSVLSV 724

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           C H+G+ DVG  +F+S++ D+ ++PI +HY CMID L R G   EA  L+  MP   D +
Sbjct: 725 CGHAGVADVGCHLFSSLRWDYDMDPIPEHYGCMIDLLARGGWLEEARQLLKTMPTTPDSI 784

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
            W  LLS C   +  +     A +L + + ++S+ +  ++N+YS +
Sbjct: 785 KWMALLSGCHGASVDKTGVFMAMQLLQQNTQSSSAHIAISNLYSKI 830



 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 185/718 (25%), Positives = 345/718 (48%), Gaps = 96/718 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA I+ +GL  +  L N ++ +Y  C +  +A+                       
Sbjct: 27  GKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNAR----------------------- 63

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+FD+M  R+   W  +++A  R G  ++A  ++++M +EG VP  +TL +V
Sbjct: 64  --------KVFDKMASRDAGLWAPMMAAYARVGHLQEATGLFHRMLDEGVVPDRVTLLTV 115

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE-EMSEPN 185
             A +    +  GRR H  +     + ++ V  AL+ +YAKCG    A  VF+  +   N
Sbjct: 116 INACSESGSLAEGRRVHRRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKN 175

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T M+S   +   + +AL +F  M+++ V+ + ++  SVL  C  +           
Sbjct: 176 IVSWTTMVSAYVERGCLEQALTLFIEMLQEGVAPNEITYVSVLNACDLDA---------- 225

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G++VH L  + G ++D  + N+L+ MY + G ++ A ++F  + +R+++ 
Sbjct: 226 ----------GRKVHRLIEQSGLDSDAFVGNALIKMYRRCGSLEDASLVFDGIADRNLLV 275

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS-------------- 351
           WN MIAGY    ++   +E  ++M   G++ D+ T + +L AC +S              
Sbjct: 276 WNSMIAGYASLNEAQGTLEFFRKMLLDGWKGDKHTLLTVLDACAKSSTLQASSLQTIHDL 335

Query: 352 -----------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                  GD K+ + +FDS+ +  +++WN M S+Y++    ++A
Sbjct: 336 AVESGLDSDTLVGTALVKIKSEQGDRKSAKMVFDSLRAKDLAAWNCMFSAYAKHGRLRDA 395

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGI---LESGKQVHAASLKTASHIDNYVASGL 445
           ++L  +M+   V+PD+ T   ILS+C A G    LE+GK+ H   L+    +D  + + L
Sbjct: 396 MELQEQMKLDQVRPDKVTFVSILSACTATGSSLGLETGKKTHEEILEQGYRLDAVLGTAL 455

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+ C R + A+ VF ++   D++ W +M+   +   L  EA + F++++     P +
Sbjct: 456 VRMYAACGRLDDAKLVFEKMESRDLISWTTMLGAYTQARLLDEASITFRRIQLEGHTPDR 515

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +    L +C  LSS+   R  H +I + G+  D  V +AL+E+Y  CG +  A + FD 
Sbjct: 516 VALIAALGACTNLSSA---RDFHERIRQLGWEKDPLVANALLEVYSACGSLEDANETFDG 572

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +   + ++WN +I  + + G+ D A  L + M   G  PD +T   ++ + +   L   G
Sbjct: 573 IGEPSVISWNLLIAAHTRLGHPDRAFDLLRAMELQGHNPDSVTLATVINSRASLQLFRKG 632

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             I +S+ L+ G+E      T +++  G+ G F  A  +   +   D+ V W   L++
Sbjct: 633 KIIHDSI-LEAGMEIDSVVATALVNFYGKCGDFATARSIFQGVGAADNVVTWNSTLAA 689



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 259/540 (47%), Gaps = 57/540 (10%)

Query: 117 VPTHIT-LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
           + T +T LA+  +A   L     G+  H  ++  GLDKN+++AN ++ +Y  C    +A 
Sbjct: 7   ISTTVTDLAASLRACHTL---PKGKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNAR 63

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            VF++M+  +   +  MM+  A+   + EA  +F  M+ + V  D V+L +V+  C+  G
Sbjct: 64  KVFDKMASRDAGLWAPMMAAYARVGHLQEATGLFHRMLDEGVVPDRVTLLTVINACSESG 123

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
              E                G++VH       FE  + +  +L+ MYAK G +D A  +F
Sbjct: 124 SLAE----------------GRRVHRRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVF 167

Query: 296 SN-LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------ 348
            N L  +++VSW  M++ Y ++    +A+ L   M   G  P+E+T +++L AC      
Sbjct: 168 DNRLLRKNIVSWTTMVSAYVERGCLEQALTLFIEMLQEGVAPNEITYVSVLNACDLDAGR 227

Query: 349 -------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                     R G ++    +FD +   ++  WN+M++ Y+   
Sbjct: 228 KVHRLIEQSGLDSDAFVGNALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLN 287

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG--KQVHAASLKTASHIDNYV 441
             +  ++ FR+M   G K D+ TL  +L +CA    L++   + +H  ++++    D  V
Sbjct: 288 EAQGTLEFFRKMLLDGWKGDKHTLLTVLDACAKSSTLQASSLQTIHDLAVESGLDSDTLV 347

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + L+ I S+    + A+ VF  +   D+  WN M +  + +    +A    +QM+ +++
Sbjct: 348 GTALVKIKSEQGDRKSAKMVFDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQV 407

Query: 502 YPTQFSFATVLSSCAKLSSSF---QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
            P + +F ++LS+C    SS     G++ H +I + GY  D  +G+AL+ MY  CG +  
Sbjct: 408 RPDKVTFVSILSACTATGSSLGLETGKKTHEEILEQGYRLDAVLGTALVRMYAACGRLDD 467

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A+  F+ M  ++ ++W  M+  Y Q    DEA   ++ +   G  PD +  +A L AC++
Sbjct: 468 AKLVFEKMESRDLISWTTMLGAYTQARLLDEASITFRRIQLEGHTPDRVALIAALGACTN 527



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 167/666 (25%), Positives = 286/666 (42%), Gaps = 118/666 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H  I ++GL  D F+ N LI++Y +C +   A  +FD +  +++  WN++++   
Sbjct: 225 AGRKVHRLIEQSGLDSDAFVGNALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIA--- 281

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                   Y   +E                      +  L  + KM  +G+     TL +
Sbjct: 282 -------GYASLNE---------------------AQGTLEFFRKMLLDGWKGDKHTLLT 313

Query: 126 VFK--ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           V    A ++ L     +  H L ++ GLD +  V  AL+ + ++ G  K A  VF+ +  
Sbjct: 314 VLDACAKSSTLQASSLQTIHDLAVESGLDSDTLVGTALVKIKSEQGDRKSAKMVFDSLRA 373

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC--GVESD 241
            +   +  M S  AK  R+ +A+E+   M    V  D V+  S+L  C   G   G+E+ 
Sbjct: 374 KDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILSACTATGSSLGLET- 432

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                         G++ H   ++ G+  D  L  +L+ MYA  G +D A+++F  +  R
Sbjct: 433 --------------GKKTHEEILEQGYRLDAVLGTALVRMYAACGRLDDAKLVFEKMESR 478

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR----------- 350
            ++SW  M+  Y Q     +A    +R++  G  PD V  I  L AC             
Sbjct: 479 DLISWTTMLGAYTQARLLDEASITFRRIQLEGHTPDRVALIAALGACTNLSSARDFHERI 538

Query: 351 ---------------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                 G ++   E FD +  PSV SWN +++++++  +   A 
Sbjct: 539 RQLGWEKDPLVANALLEVYSACGSLEDANETFDGIGEPSVISWNLLIAAHTRLGHPDRAF 598

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            L R M+ +G  PD  TLA +++S A++ +   GK +H + L+    ID+ VA+ L+  Y
Sbjct: 599 DLLRAMELQGHNPDSVTLATVINSRASLQLFRKGKIIHDSILEAGMEIDSVVATALVNFY 658

Query: 450 SKCQRNELAERVFHRIPELD-IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
            KC     A  +F  +   D +V WNS +A  + +    EA     +M Q  + PT  +F
Sbjct: 659 GKCGDFATARSIFQGVGAADNVVTWNSTLAAYAQSGHASEALHVLAEMVQQGVAPTAVTF 718

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
            +VLS C     +  G  + + +  D  ++ I              + YG          
Sbjct: 719 VSVLSVCGHAGVADVGCHLFSSLRWDYDMDPI-------------PEHYGC--------- 756

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
                   MI   A+ G+ +EA +L K M  +   PD I ++A+L+ C  + +   GV  
Sbjct: 757 --------MIDLLARGGWLEEARQLLKTMPTT---PDSIKWMALLSGCHGASVDKTGV-- 803

Query: 629 FNSMQL 634
           F +MQL
Sbjct: 804 FMAMQL 809



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 148/279 (53%), Gaps = 7/279 (2%)

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
           TT+  + +S  A   L  GK++HA  +      + ++A+G++ +Y  C+  + A +VF +
Sbjct: 9   TTVTDLAASLRACHTLPKGKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNARKVFDK 68

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           +   D   W  M+A  +      EA   F +M    + P + +  TV+++C++  S  +G
Sbjct: 69  MASRDAGLWAPMMAAYARVGHLQEATGLFHRMLDEGVVPDRVTLLTVINACSESGSLAEG 128

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD-MMHGKNTVTWNEMIHGYAQ 583
           R+VH +I+   +   + VG+AL+ MY KCG +  AR+ FD  +  KN V+W  M+  Y +
Sbjct: 129 RRVHRRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYVE 188

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
            G  ++A+ L+ +M+  GV P++IT+V++L AC     +D G ++   ++   G++    
Sbjct: 189 RGCLEQALTLFIEMLQEGVAPNEITYVSVLNACD----LDAGRKVHRLIE-QSGLDSDAF 243

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
               +I    R G   +A ++ D +  + + ++W  +++
Sbjct: 244 VGNALIKMYRRCGSLEDASLVFDGIADR-NLLVWNSMIA 281


>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
 gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
          Length = 806

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 224/769 (29%), Positives = 370/769 (48%), Gaps = 92/769 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HAHI+   L  +  L   + ++Y++C         FD                   
Sbjct: 69  GRRVHAHIVSRRLARNALLGELVFQMYARCR-------CFDT------------------ 103

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A  LFD MP+R    WN L+   +        L +Y +MS E   P+       
Sbjct: 104 ------AIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWA 157

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   + D+  GR  H   +  G   N  + +AL+++YA+CG    A+  F++  E   
Sbjct: 158 IVACGRIKDLAQGRSIH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGT 216

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
             + A+MS LA       A+E+F  M +   S  S +++      A    G       Q 
Sbjct: 217 APWNAIMSALAGAGHHRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRG-----GIQI 271

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            +K    +HG +V  L             N+L+ MY + G +D A  +F+++P R+VVSW
Sbjct: 272 HDKIQSEIHGTRVLVL-------------NALISMYVRCGKLDEALRVFADMPHRNVVSW 318

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
             MIA   Q    + +++L   M + G  P+E T  +++ A                   
Sbjct: 319 TSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQ 378

Query: 350 ---------------------RSGDIKTGREMFDSM--PSPSVSSWNAMLSSYSQSENHK 386
                                RSG +   RE+FDS+   S +V S+  M+S+Y+ + + +
Sbjct: 379 ITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPR 438

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA-SHIDNYVASGL 445
           +A+++FREM  RGV P+  T A +L++C A+G L SG  +H   +++     D +  + L
Sbjct: 439 QALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSL 498

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC     A RVF  +   D+V W ++IA    +  +  A   + +M Q+ ++P  
Sbjct: 499 VDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDI 558

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            + +T+L +CA L     G ++H Q  +     D    +AL  MY KCG +  A + +  
Sbjct: 559 ATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRR 618

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
             G +  TW  M+  ++Q G    A+ LY +M + GV+P+++TF+ +L +CS +GLV  G
Sbjct: 619 CRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEG 678

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            E F+S+  D+G +P  +H+ CM+D LGRAG   +AE L+D MP   D + W+ LLSSC+
Sbjct: 679 REFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCK 738

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV-REL 733
           LH +  +  RAAE L  LDP++++ +  L+ IY++ GR  D+  + REL
Sbjct: 739 LHTDAEIGTRAAECLLELDPESTSQFVALSQIYAAAGRNSDIDEIKREL 787



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/406 (21%), Positives = 165/406 (40%), Gaps = 85/406 (20%)

Query: 6   AGKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           +G  +H  ++ +GL   D F  N L+++Y+KC +   A  +F+ M  KD+ +W  I++A 
Sbjct: 474 SGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAA- 532

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                              NV S NN             AL +Y++M   G  P   TL+
Sbjct: 533 -------------------NVQSGNN-----------RAALDLYDRMLQSGIHPDIATLS 562

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++  A   L D+  G + H   ++  L+++ +  NAL ++YAKCG  + A  ++      
Sbjct: 563 TLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGS 622

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +  T+T+M++  ++      ALE++  M  + V  + V+   VL  C++ G   E   F 
Sbjct: 623 DVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREF- 681

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                          H +T   G +        ++D+  + G +  AE +  ++P     
Sbjct: 682 --------------FHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMP----- 722

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---EMF 361
                                        F PDE+   ++L +C    D + G    E  
Sbjct: 723 -----------------------------FYPDEIAWQSLLSSCKLHTDAEIGTRAAECL 753

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF-RGVKPDRTT 406
             +   S S + A+   Y+ +  + +  ++ RE+   R ++  RTT
Sbjct: 754 LELDPESTSQFVALSQIYAAAGRNSDIDEIKRELALRRQIEVHRTT 799



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 2/139 (1%)

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
           AGL ++ LD +A +   ++R          +A +L  C    +   GR+VHA I      
Sbjct: 25  AGLLISRLD-DALLRLDKLRHRSTSQLLL-YANLLRQCGNQRALDHGRRVHAHIVSRRLA 82

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
            +  +G  + +MY +C     A   FD M  +    WN ++  +       + + LY+ M
Sbjct: 83  RNALLGELVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRM 142

Query: 598 IASGVKPDDITFVAILTAC 616
                +P    F+  + AC
Sbjct: 143 SVENTQPSACGFMWAIVAC 161


>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 224/730 (30%), Positives = 365/730 (50%), Gaps = 89/730 (12%)

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLASVFKASTALLDVEHGRRCH 143
           ++  N L++ L R+     ++ ++ ++ +  ++ P H TL+S   A   L     G + H
Sbjct: 17  LIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLH 76

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK----- 198
              I+ GL    +V N LLS YAK         VF E+  P+  ++T ++S   K     
Sbjct: 77  AYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIG 136

Query: 199 --------TDRVVE------------------ALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
                   T R++                   AL +FR M +  V  D  + +SVL +C+
Sbjct: 137 YACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCS 196

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
            E                     G++VH L IK GF     + N+LL MY  +G +  A 
Sbjct: 197 LELLDF-----------------GREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAY 239

Query: 293 VIFSNLPERSV---VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC- 348
            +F    E +V   +++NVMI G     +  +A+ + + M+     P E+T ++++ +C 
Sbjct: 240 EVFEE-AESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCS 298

Query: 349 -------VRSGDIKTGRE------------------------MFDSMPSPSVSSWNAMLS 377
                  V +  IK G E                        +FD +    + SWN ++ 
Sbjct: 299 SARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIM 358

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
           +Y+Q   ++ AI  F +MQ  G++PD  T+  +L+S  ++ I+   K   A   K   + 
Sbjct: 359 NYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIV---KMFQALVSKNGLNS 415

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
              V++ L+  +SK  + E A +VF+ +   +++ WN++I+G   N   ++    F ++ 
Sbjct: 416 KIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELL 475

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
            + + P  ++ + VLS CA +S+   G+Q+H  I + G  +   +G+ALI MY KCGD+ 
Sbjct: 476 MSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLD 535

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VKPDDITFVAILTAC 616
            + + F++M+G++ V+WN MI  YAQ+G G EAV  +K M  SG VKPD  TF A+L+AC
Sbjct: 536 WSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSAC 595

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH+GLVD G  IFNSM  D+G EP  DH +C++D LGRAG+  EAE LI+    K    I
Sbjct: 596 SHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSI 655

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W  L S+C  H N+RL +  A  L  ++  + A Y LL+NIY++ G+W++    R+LM +
Sbjct: 656 WWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQK 715

Query: 737 NCIVKDPAYS 746
             + K P  S
Sbjct: 716 TRVAKQPGCS 725



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 170/547 (31%), Positives = 271/547 (49%), Gaps = 57/547 (10%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G  LHA+ ++ GL   T + N L+  Y+K  +  S Q +F+++ + D+YSW  +LSA  
Sbjct: 71  SGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACT 130

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   + +A  LF++ P    V WN +I+    N   E AL+++ +M   G      T AS
Sbjct: 131 KLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFAS 190

Query: 126 VFK-ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           V    S  LLD   GR  H LVIK G      V NALL++Y   G    A  VFEE    
Sbjct: 191 VLSLCSLELLDF--GREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAEST 248

Query: 185 --NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             +++TF  M+ GLA   R  EAL MF+ M    +    ++  SV+  C+          
Sbjct: 249 VHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSS--------- 299

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                   +R  H  QVH   IK+GFEA   +SN+ + MY+  G++ +  ++F  L E+ 
Sbjct: 300 --------ARVSH--QVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKD 349

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV---------------- 346
           ++SWN++I  Y Q      AI    +M+  G EPDE T  ++L                 
Sbjct: 350 LISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIVKMFQALVS 409

Query: 347 ----------------ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                           A  + G I+   ++F++M SP++ SWN ++S +  +    + ++
Sbjct: 410 KNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLE 469

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            F E+    +KP+  TL+I+LS CA++  L  GKQ+H   L++       + + LI +Y+
Sbjct: 470 QFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYA 529

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN-EMYPTQFSFA 509
           KC   + + R+F+ +   DIV WN+MI+  + +    EA  FFK M+ +  + P Q +F 
Sbjct: 530 KCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFT 589

Query: 510 TVLSSCA 516
            VLS+C+
Sbjct: 590 AVLSACS 596



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 1/179 (0%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA++SA  K   +E AY++F+ M   N++SWN +IS  + NG   + L  + ++      
Sbjct: 421 NALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLK 480

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   TL+ V     ++  + HG++ HG +++ G+     + NAL+++YAKCG    ++ +
Sbjct: 481 PNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRI 540

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSVSLSSVLGVCAREG 235
           F  M+  + V++ AM+S  A+  +  EA+  F+ M     V  D  + ++VL  C+  G
Sbjct: 541 FNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAG 599


>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
 gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
          Length = 806

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 224/769 (29%), Positives = 370/769 (48%), Gaps = 92/769 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HAHI+   L  +  L   + ++Y++C         FD                   
Sbjct: 69  GRRVHAHIVSRRLARNALLGELVFQMYARCR-------CFDT------------------ 103

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A  LFD MP+R    WN L+   +        L +Y +MS E   P+       
Sbjct: 104 ------AIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWA 157

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   + D+  GR  H   +  G   N  + +AL+++YA+CG    A+  F++  E   
Sbjct: 158 IVACGRIKDLAQGRSIH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGT 216

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
             + A+MS LA       A+E+F  M +   S  S +++      A    G       Q 
Sbjct: 217 APWNAIMSALAGAGHHRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRG-----GIQI 271

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            +K    +HG +V  L             N+L+ MY + G +D A  +F+++P R+VVSW
Sbjct: 272 HDKIQSEIHGTRVLVL-------------NALISMYVRCGKLDEALRVFADMPHRNVVSW 318

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
             MIA   Q    + A++L   M + G  P+E T  +++ A                   
Sbjct: 319 TSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQ 378

Query: 350 ---------------------RSGDIKTGREMFDSM--PSPSVSSWNAMLSSYSQSENHK 386
                                RSG +   RE+FDS+   S +V S+  M+++Y+ + + +
Sbjct: 379 ITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPR 438

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA-SHIDNYVASGL 445
           +A+++FREM  RGV P+  T A +L++C A+G L SG  +H   +++     D +  + L
Sbjct: 439 QALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSL 498

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC     A RVF  +   D+V W ++IA    +  +  A   + +M Q+ ++P  
Sbjct: 499 VDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDI 558

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            + +T+L +CA L     G ++H Q  +     D    +AL  MY KCG +  A + +  
Sbjct: 559 ATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRR 618

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
             G +  TW  M+  ++Q G    A+ LY +M + GV+P+++TF+ +L +CS +GLV  G
Sbjct: 619 CRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEG 678

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            E F+S+  D+G +P  +H+ CM+D LGRAG   +AE L+D MP   D + W+ LLSSC+
Sbjct: 679 REFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCK 738

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV-REL 733
           LH +  +  RAAE L  LDP++++ +  L+ IY++ GR  D+  + REL
Sbjct: 739 LHTDAEIGTRAAECLLELDPESTSQFVALSQIYAAAGRNSDIDEIKREL 787



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/406 (21%), Positives = 165/406 (40%), Gaps = 85/406 (20%)

Query: 6   AGKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           +G  +H  ++ +GL   D F  N L+++Y+KC +   A  +F+ M  KD+ +W  I++A 
Sbjct: 474 SGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAA- 532

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                              NV S NN             AL +Y++M   G  P   TL+
Sbjct: 533 -------------------NVQSGNN-----------RAALDLYDRMLQSGIHPDIATLS 562

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++  A   L D+  G + H   ++  L+++ +  NAL ++YAKCG  + A  ++      
Sbjct: 563 TLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGS 622

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +  T+T+M++  ++      ALE++  M  + V  + V+   VL  C++ G   E   F 
Sbjct: 623 DVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREF- 681

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                          H +T   G +        ++D+  + G +  AE +  ++P     
Sbjct: 682 --------------FHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMP----- 722

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---EMF 361
                                        F PDE+   ++L +C    D + G    E  
Sbjct: 723 -----------------------------FYPDEIAWQSLLSSCKLHTDAEIGTRAAECL 753

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF-RGVKPDRTT 406
             +   S S + A+   Y+ +  + +  ++ RE+   R ++  RTT
Sbjct: 754 LELDPESTSQFVALSQIYAAAGRNSDIDEIKRELALRRQIEVHRTT 799



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 2/139 (1%)

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
           AGL ++ LD +A +   ++R          +A +L  C    +   GR+VHA I      
Sbjct: 25  AGLLISRLD-DALLRLDKLRHRSTSQLLL-YANLLRQCGNQRALDHGRRVHAHIVSRRLA 82

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
            +  +G  + +MY +C     A   FD M  +    WN ++  +       + + LY+ M
Sbjct: 83  RNALLGELVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRM 142

Query: 598 IASGVKPDDITFVAILTAC 616
                +P    F+  + AC
Sbjct: 143 SVENTQPSACGFMWAIVAC 161


>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like, partial [Brachypodium distachyon]
          Length = 735

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 223/701 (31%), Positives = 354/701 (50%), Gaps = 55/701 (7%)

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVE--HGR 140
           R+   WN+L  AL    L  +AL VYN M   G  P   T      A+ A        G 
Sbjct: 37  RSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGL 96

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
             H   ++ G   +++  N L++ YA CG    A  VF+EM   + V++ +++S      
Sbjct: 97  ELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANK 156

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              +A +    M+R  V ++  SL SV+       CGVE +        F   VHG    
Sbjct: 157 MFDDARQALLSMMRSGVPVNVASLVSVV-----PACGVEQE------GGFGLGVHG---- 201

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            L +K G ++ ++L N+L+DMY K G ++++  +F  +PER+ VSWN  I  +       
Sbjct: 202 -LVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYG 260

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-------------------- 360
             + L + M   GF P  +T  ++L A V  G    GRE+                    
Sbjct: 261 DVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLV 320

Query: 361 ---------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                          F+ +   +V SWNAM+++  Q+    EA  L  +MQ  G  P+  
Sbjct: 321 DMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSI 380

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           TL  +L +C+ M  L++GKQ+HA S++T    D ++++ LI +Y+KC +  LA+ +F  +
Sbjct: 381 TLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-L 439

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
            E D V +N++I G S +    E+   FKQ+    +     SF   L++C  LSS  QG+
Sbjct: 440 SEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGK 499

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           ++H  + +    N  F+ + L+ +Y K G +  A + F+ +  K+  +WN MI GY  +G
Sbjct: 500 EIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHG 559

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
             D A  L+  M   GV  D ++++A+L+ CSH GLV+ G + F+ M L   +EP   HY
Sbjct: 560 QIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHM-LAQNLEPQQMHY 618

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
            CM+D LGR+G   E+  +I +MP   +  +W  LL +CR+H N+ LA+ AA+ LF L P
Sbjct: 619 ACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKP 678

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++S  YS+L N+Y+  GRW++   +R LM    + K+PAYS
Sbjct: 679 EHSGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQKNPAYS 719



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 264/545 (48%), Gaps = 83/545 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LHA  LR+G   D F  N L+  Y+ C +   A+ +FD+MP +D+ SWN+++S+   
Sbjct: 95  GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSS--- 151

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI-TLAS 125
                 A K+FD+  +         + +++R+G                 VP ++ +L S
Sbjct: 152 ----FLANKMFDDARQA--------LLSMMRSG-----------------VPVNVASLVS 182

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A     +   G   HGLV+K GLD  + + NAL+ +Y K G  + ++ VFE M E N
Sbjct: 183 VVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERN 242

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           EV++ + +          + L +FR M  +     S++LSS+L         VE   F  
Sbjct: 243 EVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPAL------VELGYFDL 296

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G++VH  +IK   E D+ ++NSL+DMYAK G ++ A  +F  +  R+VVS
Sbjct: 297 ----------GREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVS 346

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
           WN MIA   Q    ++A  L+ +M+  G  P+ +T +N+L AC R   +KTG++      
Sbjct: 347 WNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSI 406

Query: 360 ----MFDSMPSPSV------------------------SSWNAMLSSYSQSENHKEAIKL 391
               MFD   S ++                         S+N ++  YSQS    E++ L
Sbjct: 407 RTGLMFDLFISNALIDMYAKCGQLRLAQSIFDLSEKDDVSYNTLILGYSQSPWSFESLNL 466

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+++   G++ D  +    L++C  +   + GK++H   ++       ++A+ L+G+Y+K
Sbjct: 467 FKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTK 526

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
               + A ++F+RI E D+  WN+MI G  ++     AF  F  M+ + +     S+  V
Sbjct: 527 GGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAV 586

Query: 512 LSSCA 516
           LS C+
Sbjct: 587 LSVCS 591



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 197/403 (48%), Gaps = 52/403 (12%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA++    K   +E + K+F+ MPERN VSWN+ I   +  GL    L+++  MS  GF+
Sbjct: 216 NALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFM 275

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  ITL+S+  A   L   + GR  HG  IK  ++ +I+VAN+L+ +YAK G  + A  V
Sbjct: 276 PGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAV 335

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           FE++   N V++ AM++ L +     EA  +   M +     +S++L ++L  C+R    
Sbjct: 336 FEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSR---- 391

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                        +    G+Q+H  +I+ G   DL +SN+L+DMYAK G +  A+ IF +
Sbjct: 392 ------------MASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF-D 438

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           L E+  VS+N +I GY Q   S +++ L +++ S G E D ++ +  L AC      K G
Sbjct: 439 LSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQG 498

Query: 358 RE-----------------------------------MFDSMPSPSVSSWNAMLSSYSQS 382
           +E                                   +F+ +    V+SWN M+  Y   
Sbjct: 499 KEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMH 558

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
                A  LF  M+  GV  D  +   +LS C+  G++E GK+
Sbjct: 559 GQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKK 601



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 188/373 (50%), Gaps = 24/373 (6%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           DI+  N+++    K   LE A  +F+++  RNVVSWN +I+ LV+NG E +A  +  KM 
Sbjct: 312 DIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQ 371

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            +G  P  ITL ++  A + +  ++ G++ H   I+ GL  +++++NAL+ +YAKCG  +
Sbjct: 372 KDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLR 431

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +F ++SE ++V++  ++ G +++    E+L +F+ +    +  D++S    L  C 
Sbjct: 432 LAQSIF-DLSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTAC- 489

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                             S    G+++H + ++        L+N+LL +Y K G +D+A 
Sbjct: 490 ---------------TNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTAS 534

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            IF+ + E+ V SWN MI GYG   Q   A  L   MK  G   D V+ I +L  C   G
Sbjct: 535 KIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGG 594

Query: 353 DIKTGREMFDSMPS----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
            ++ G++ F  M +    P    +  M+    +S    E++++  +M F     +     
Sbjct: 595 LVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHA---NSDVWG 651

Query: 409 IILSSCAAMGILE 421
            +L +C   G +E
Sbjct: 652 ALLGACRIHGNIE 664



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 38/289 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA  +R GL  D F+ N LI++Y+KC     AQ +FD                   
Sbjct: 398 GKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD------------------- 438

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        + E++ VS+N LI    ++    ++L+++ ++S+ G     I+    
Sbjct: 439 -------------LSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGA 485

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A T L   + G+  HG++++  L  + ++AN LL LY K G    A  +F  + E + 
Sbjct: 486 LTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDV 545

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++  M+ G     ++  A  +F LM    V+ D VS  +VL VC+  G       +   
Sbjct: 546 ASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFS- 604

Query: 247 DNKFSRNVHGQQVH--CLTIKLGFEADLHLS-NSLLDM-YAKNGDMDSA 291
            +  ++N+  QQ+H  C+   LG    L  S   +LDM +  N D+  A
Sbjct: 605 -HMLAQNLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGA 652


>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
 gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
          Length = 643

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 204/639 (31%), Positives = 336/639 (52%), Gaps = 57/639 (8%)

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           AS+ +   +  D+   ++    + + G   + Y+ N L+  Y KCG  + A  VF+ +  
Sbjct: 16  ASILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQR 75

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N  ++T M+   A      EAL +FR +  + ++ID+V+L S L  CA     V  D+ 
Sbjct: 76  RNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACA-----VAGDL- 129

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+ +H     LG+E+++ ++ +L+ MY K G ++ A+ +F+ L ER+ 
Sbjct: 130 ----------EEGRGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNR 179

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI--------------------- 342
           VSWN M+A Y Q     +A+ L + M   G +PD  T +                     
Sbjct: 180 VSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWKGEGEHGTRIHDQVL 239

Query: 343 -----------NMLVACVRSGD-IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                      N LV+   SG  +   R +FD +   +V SWNAML++Y+Q+  + +A+ 
Sbjct: 240 ESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVD 299

Query: 391 LF---REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA--ASLKTASHIDNYVASGL 445
           LF    EM+   V+P+  T   +L +CAA G LE+G+++HA  ASL   S +   V   L
Sbjct: 300 LFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLS--VGGAL 357

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YS+C    LA+ VF  +P  ++V WN +I   + +    EA    ++M    + P +
Sbjct: 358 INMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDK 417

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ-FFD 564
           F+F +VL +C+   +  +G+ +HA I   G   D  +G+ALI +Y KCG +  AR  F D
Sbjct: 418 FTFISVLHACSASEALAEGKAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLD 477

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
           M   +N VTWN M+      G  ++ V +   M   G+ PD++TF+++L ACSH G +  
Sbjct: 478 MKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDELTFLSVLFACSHGGSIQQ 537

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G+++F S  +D+G+     HY C++D LGR G   EA+ +++ MP + + V W  LL +C
Sbjct: 538 GLDLFLSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEVLNRMPFQANDVAWMTLLGAC 597

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGR 723
           R+H +    +RAA+ +  LDP+N+APY+LL+ ++S  GR
Sbjct: 598 RIHRDFEQGRRAADYVIELDPQNAAPYALLSTMFSVAGR 636



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 255/559 (45%), Gaps = 88/559 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
            A K     I R+G   D +L N L++ Y KC +   A+                     
Sbjct: 29  TAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAR--------------------- 67

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                     ++FD +  RN+ SW  ++ A   NG   +AL ++ ++ + G    ++TL 
Sbjct: 68  ----------EVFDRIQRRNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLV 117

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S  KA     D+E GR  H     +G +  I VA AL+S+Y KCG  + A  VF  + E 
Sbjct: 118 SALKACAVAGDLEEGRGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVER 177

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++ AM++  A+     EA+ ++RLM  + +  D+ +  SVL                
Sbjct: 178 NRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVL---------------- 221

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
             D       HG ++H   ++ GF ++  L+N+L+ MY   G +D A  +F  + E++VV
Sbjct: 222 --DGWKGEGEHGTRIHDQVLESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVV 279

Query: 305 SWNVMIAGYGQKYQSTKAIEL---LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
           SWN M+  Y Q  +  KA++L   +  M+    EP+ VT +N+LVAC  +G ++ GR++ 
Sbjct: 280 SWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIH 339

Query: 361 ----------------------------------FDSMPSPSVSSWNAMLSSYSQSENHK 386
                                             FDS+P  ++ SWN ++ SY+   + K
Sbjct: 340 AEVASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGK 399

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA+ + ++M+  G+KPD+ T   +L +C+A   L  GK +HA    +    D  + + LI
Sbjct: 400 EALGVHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGLERDEAIGTALI 459

Query: 447 GIYSKCQRNELAERVFHRI-PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
            +Y KC   E A  VF  +    ++V WNSM+A         +       M    + P +
Sbjct: 460 NLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDE 519

Query: 506 FSFATVLSSCAKLSSSFQG 524
            +F +VL +C+   S  QG
Sbjct: 520 LTFLSVLFACSHGGSIQQG 538



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 36/268 (13%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           S A++L  CA        +Q   +I +DG+  D ++G+ L++ Y KCG +  AR+ FD +
Sbjct: 14  SHASILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRI 73

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             +N  +W  M+  YA NG+G EA+ L++++ + G+  D++T V+ L AC+ +G ++ G 
Sbjct: 74  QRRNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGR 133

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
            I  S +   G E  +   T ++   G+ GH  EA+ +   +  + + V W  +L++   
Sbjct: 134 GIHASAR-SLGYESEIIVATALVSMYGKCGHLEEAKAVFATL-VERNRVSWNAMLAAYAQ 191

Query: 687 HAN----VRLAKRAAEELFRLDP------------------------------KNSAPYS 712
           + +    VRL +    E  + D                                N+   +
Sbjct: 192 NGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWKGEGEHGTRIHDQVLESGFGSNTTLAN 251

Query: 713 LLANIYSSLGRWDDLRAVRELMSENCIV 740
            L ++Y S GR DD R V + ++E  +V
Sbjct: 252 ALVSMYGSGGRVDDARYVFDGIAEKTVV 279



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 65/231 (28%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLF-DKMPHKDIYSWNAI 60
           +A   GK +HA I  +GL  D  +   LI LY KC +   A+++F D    +++ +WN++
Sbjct: 431 EALAEGKAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSM 490

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L+A C                               + GLE+  + + + M  EG +P  
Sbjct: 491 LAAAC------------------------------TKGGLED-CVEIIHMMGLEGIMPDE 519

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           +T  SV  A +           HG  I+ GLD  ++++  +   Y     TKH V V + 
Sbjct: 520 LTFLSVLFACS-----------HGGSIQQGLD--LFLSAGV--DYGIATNTKHYVCVVDI 564

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
                          L +  R+ EA E+   M  +A   + V+  ++LG C
Sbjct: 565 ---------------LGRVGRLEEAQEVLNRMPFQA---NDVAWMTLLGAC 597


>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Vitis vinifera]
          Length = 685

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 233/778 (29%), Positives = 367/778 (47%), Gaps = 162/778 (20%)

Query: 7   GKLLHAHILRNGLFDDTF-LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+LLH   L++G+      + NRL+++YS+CN+   AQ                      
Sbjct: 25  GRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQ---------------------- 62

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                    +LF+EMP+RN  SWN +I   +++G + K+L +++ M +            
Sbjct: 63  ---------QLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPH------------ 101

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                                      K+ +  N ++S +AK G  + A  +F EM   N
Sbjct: 102 ---------------------------KDAFSWNVVISGFAKEGNLEVARRLFNEMPWKN 134

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFR---LMIRKAVSIDSVSLSSVLGVCAREG---CGVE 239
            + + +M+ G A   R  EA+ +F+   L   +    D+  L++V+G C   G   CG  
Sbjct: 135 GIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCG-- 192

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                            +Q+H   +    E D  L +SL+++Y K GD+DSA  + + + 
Sbjct: 193 -----------------KQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMK 235

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           E    S + +I+GY                 SCG   D                    R 
Sbjct: 236 EPDAFSLSALISGYA----------------SCGRMND-------------------ARR 260

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F    +  V  WN+M+S Y  +    EA++LF  M+ +GV+ D +T A +LS+C+ +GI
Sbjct: 261 IFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGI 320

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR-------------------NEL--- 457
           ++ G QVHA   K     D  + S L+ +YSKC+R                   N +   
Sbjct: 321 IDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITV 380

Query: 458 ---------AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
                    A ++F  +P   ++ WNSMI G S N+  IEA   F +M +  +   +FS 
Sbjct: 381 YSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSL 440

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           A V+S+CA +SS   G Q+ A+    G   D  + ++L++ YCKCG +   R+ FD M  
Sbjct: 441 AGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMK 500

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            + V WN M+ GYA NG+G EA+ ++  M + GV+P DITFV +L+AC H GLV+ G + 
Sbjct: 501 SDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKW 560

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F +M+LD+ + P ++HY+CM+D   RAG   +A  LI++MP K D  +W  +L  C  H 
Sbjct: 561 FYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHG 620

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           N  L K+ A+ +  LDP+NS  Y  L+ IY++   W     VR+LM +  I K P  S
Sbjct: 621 NNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKVPGCS 678



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 13/236 (5%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF-VGSALIEMYCKCGDIYGARQFFDM 565
           S A  L SC    S ++GR +H    K G ++ +  +G+ L++MY +C  +  A+Q F+ 
Sbjct: 8   SLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEE 67

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           M  +N  +WN MI GY ++G   +++ L+  M       D  ++  +++  +  G ++V 
Sbjct: 68  MPKRNCFSWNTMIEGYLKSGSKGKSLELFDSM----PHKDAFSWNVVISGFAKEGNLEVA 123

Query: 626 VEIFNSMQLDHGV--EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             +FN M   +G+    ++  Y C        G F +  +   E  C D  V+  V+ + 
Sbjct: 124 RRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGAC 183

Query: 684 CRLHA---NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
             L A     ++  R   +    D   S   S L N+Y   G  D    V  LM E
Sbjct: 184 TNLGALDCGKQIHARIVVDEVEFD---SVLGSSLVNLYGKCGDIDSANHVLNLMKE 236


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 212/661 (32%), Positives = 343/661 (51%), Gaps = 54/661 (8%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T   V K  +   D+  G   HG+V K+G D ++YV N LL LY  CG+   A  +F+EM
Sbjct: 12  TFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEM 71

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEM-FRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            E + V++  ++  L+      EA    F +++R  +  + VS+ S+L + A        
Sbjct: 72  PERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISA-------- 123

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
              A  D + +R     ++HC ++K+G ++ +   N+L+D Y K G + +   +F+   E
Sbjct: 124 ---ALEDEEMTR-----RIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVE 175

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           ++ VSWN +I G   K +   A+   + M   G +P+ VT  ++L   V     K G+E+
Sbjct: 176 KNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEI 235

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              F ++   ++ SWNAM+++Y+ +   
Sbjct: 236 HGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLP 295

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            EAI+   +MQ  G  P+  T   +L +CA +G L  GK++HA  ++     D +V++ L
Sbjct: 296 LEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSL 355

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +Y+KC     A  VF+     D V +N +I G S     +++   F +MR     P  
Sbjct: 356 IDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDV 414

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            SF  V+S+CA L++  QG++VH    ++   + +FV ++L++ Y KCG I  A + F+ 
Sbjct: 415 VSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQ 474

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  K+  +WN MI GY   G  + A+ +++ M    V+ D ++++A+L+ACSH GLV+ G
Sbjct: 475 ILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERG 534

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            + F+ M L   +EP   HYTCM+D LGRAG   EA  LI ++P   D  IW  LL +CR
Sbjct: 535 WQYFSEM-LAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACR 593

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
           ++ NV L +RAAE LF L P++   Y LL+NIY+  GRWD+   +RELM      K+P  
Sbjct: 594 IYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGC 653

Query: 746 S 746
           S
Sbjct: 654 S 654



 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 184/613 (30%), Positives = 297/613 (48%), Gaps = 95/613 (15%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y  N +L        L  A +LFDEMPER+VVSWN +I  L  NG   +A + Y  M 
Sbjct: 44  DVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMI 103

Query: 113 NEGFV-PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
               + P  +++ S+   S AL D E  RR H   +K+GLD  +   NAL+  Y KCG  
Sbjct: 104 LRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSV 163

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
           K    VF E  E NEV++ ++++GLA   R  +AL  FR+MI      +SV++SS+L V 
Sbjct: 164 KALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVL 223

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
                 VE + F            G+++H  ++++G E D+ ++NSL+DMYAK+G    A
Sbjct: 224 ------VELECFKA----------GKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEA 267

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
             IF NL  R++VSWN MIA Y       +AI  + +M+  G  P+ VT  N+L AC R 
Sbjct: 268 STIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARL 327

Query: 352 GDIKTGREM-----------------------------------FDSMPSPSVSSWNAML 376
           G +  G+E+                                   F++     V S+N ++
Sbjct: 328 GFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEV-SYNILI 386

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
             YS++++  +++ LF EM+  G KPD  +   ++S+CA +  L+ GK+VH  +L+   +
Sbjct: 387 IGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLY 446

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
              +V++ L+  Y+KC R ++A R+F++I   D+  WN+MI G  +      A   F+ M
Sbjct: 447 SHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAM 506

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R + +     S+  VLS+C+           H  + + G+                    
Sbjct: 507 RDDTVQYDLVSYIAVLSACS-----------HGGLVERGW-------------------- 535

Query: 557 YGARQFFDMMHGK----NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
               Q+F  M  +      + +  M+    + G+ +EA +L + +    + PD   + A+
Sbjct: 536 ----QYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQL---PIAPDANIWGAL 588

Query: 613 LTACSHSGLVDVG 625
           L AC   G V++G
Sbjct: 589 LGACRIYGNVELG 601



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 235/479 (49%), Gaps = 63/479 (13%)

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M+R+ V +D  +   VL +C        SD F            G +VH +  KLGF+ D
Sbjct: 1   MVRRGVQLDDHTFPFVLKLC--------SDSFDIC--------KGMEVHGVVFKLGFDTD 44

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA--------- 322
           +++ N+LL +Y   G ++ A  +F  +PER VVSWN +I         T+A         
Sbjct: 45  VYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMIL 104

Query: 323 -----------IELLQRMKSCGFEPDE-----------------VTSINMLV-ACVRSGD 353
                      I LL    S   E +E                 VT+ N LV A  + G 
Sbjct: 105 RSVIKPNLVSVISLLP--ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGS 162

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           +K   ++F+     +  SWN++++  +      +A+  FR M   G +P+  T++ IL  
Sbjct: 163 VKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPV 222

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
              +   ++GK++H  S++  +  D ++A+ LI +Y+K   +  A  +FH +   +IV W
Sbjct: 223 LVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSW 282

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           N+MIA  +LN L +EA  F  QM++    P   +F  VL +CA+L     G+++HA   +
Sbjct: 283 NAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVR 342

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G  +D+FV ++LI+MY KCG ++ AR  F+    K+ V++N +I GY++     +++ L
Sbjct: 343 IGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSR-KDEVSYNILIIGYSETDDCLQSLNL 401

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV------EPILDHYT 646
           + +M   G KPD ++FV +++AC++   +  G E+      +H          +LD YT
Sbjct: 402 FSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYT 460



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 213/462 (46%), Gaps = 60/462 (12%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AGK +H   +R G   D F+ N LI++Y+K  + HS +                      
Sbjct: 231 AGKEIHGFSMRMGTETDIFIANSLIDMYAK--SGHSTE---------------------- 266

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                  A  +F  +  RN+VSWN +I+    N L  +A+    +M   G  P  +T  +
Sbjct: 267 -------ASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTN 319

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   L  +  G+  H + ++IGL  +++V+N+L+ +YAKCG    A  VF   S  +
Sbjct: 320 VLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKD 378

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           EV++  ++ G ++TD  +++L +F  M       D VS   V+  CA             
Sbjct: 379 EVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACA------------- 425

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +    G++VH + ++    + L +SNSLLD Y K G +D A  +F+ +  + V S
Sbjct: 426 ---NLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVAS 482

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI GYG   +   AI + + M+    + D V+ I +L AC   G ++ G + F  M 
Sbjct: 483 WNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEML 542

Query: 366 S----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           +    P+   +  M+    ++   +EA KL +++    + PD      +L +C   G +E
Sbjct: 543 AQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLP---IAPDANIWGALLGACRIYGNVE 599

Query: 422 SGKQV--HAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            G++   H   LK   H   Y+   L  IY++  R + A ++
Sbjct: 600 LGRRAAEHLFELK-PQHCGYYIL--LSNIYAETGRWDEANKI 638


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 219/701 (31%), Positives = 351/701 (50%), Gaps = 55/701 (7%)

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL--ASVFKASTALLDVEHGR 140
           R+   WN+L  AL    L  +AL VYN M      P   T   A    A+      + G 
Sbjct: 80  RSAFLWNSLSRALSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGL 139

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
             H   ++ G   +++  N L++ YA CG    A  VF+EM E + V++ +++S      
Sbjct: 140 ELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNG 199

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              +A      M+R    ++  SL SV+  C  E            + KF     G  +H
Sbjct: 200 MFHDARRALVSMMRSGFPLNVASLVSVVPACGTE-----------QEEKF-----GLSIH 243

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            L +K+G    ++L+N+L+DMY K GD++++  +F  + E++ VSWN  I  +       
Sbjct: 244 ALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYG 303

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--------------------- 359
             + + ++M      P  +T  ++L A V  G    GRE                     
Sbjct: 304 DVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLV 363

Query: 360 --------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                         +F+ M   +V SWNAM+++  Q+    EA +L  +MQ  G  P+  
Sbjct: 364 DMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSI 423

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           TL  +L +CA M  L+ GKQ+HA S++     D ++++ LI +YSKC +  LA  +F R 
Sbjct: 424 TLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER- 482

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
            E D V +N++I G S +    E+ + FKQMR   +     SF   LS+C  LS    G+
Sbjct: 483 SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGK 542

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           ++H  + +       F+ ++L+++Y K G +  A + F+ +  K+  +WN MI GY  +G
Sbjct: 543 EIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHG 602

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
             D A  L++ M   G+  D ++++A+L ACSH GLVD G + F+ M +   +EP   HY
Sbjct: 603 QIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQM-VAQNIEPQQMHY 661

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
            CM+D LGRAG   +   +I +MP   +  +W  LL +CR+H N+ LA+ AAE LF L P
Sbjct: 662 ACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKP 721

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++S  Y+L+ N+Y+  GRW++   +R+LM    + K+PAYS
Sbjct: 722 EHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYS 762



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 168/615 (27%), Positives = 284/615 (46%), Gaps = 89/615 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LHA  LR G   D F  N L+  Y+ C     A+                       
Sbjct: 138 GLELHASALRRGHLADVFTGNTLVAFYAACGKACDAR----------------------- 174

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++FDEMPER+VVSWN+L+SA + NG+   A      M   GF     +L SV
Sbjct: 175 --------RVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSV 226

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A     + + G   H L +K+GL+  + +ANAL+ +Y K G  + ++ VF+ M E NE
Sbjct: 227 VPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNE 286

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ + +          + L MFR M    V   S++LSS+L      G     D+    
Sbjct: 287 VSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELG---SFDL---- 339

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G++VH  +IK   + D+ ++NSL+DMYAK G ++ A  IF  + +R+VVSW
Sbjct: 340 ---------GREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSW 390

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------- 359
           N MIA   Q    T+A  L+  M+  G  P+ +T +N+L AC R   +K G++       
Sbjct: 391 NAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIR 450

Query: 360 ---MFDSMPSPSV------------------------SSWNAMLSSYSQSENHKEAIKLF 392
              MFD   S ++                         S+N ++  YSQS    E++ LF
Sbjct: 451 RGLMFDLFISNALIDMYSKCGQLSLARNIFERSEKDDVSYNTLILGYSQSPWCFESLLLF 510

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           ++M+  G+  D  +    LS+C  + + + GK++H   ++       ++++ L+ +Y+K 
Sbjct: 511 KQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKG 570

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNS-LDIEAFMFFKQMRQNEMYPTQFSFATV 511
                A ++F++I + D+  WN+MI G  ++  +DI AF  F+ M+ + +     S+  V
Sbjct: 571 GMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDI-AFELFELMKGDGLDYDHVSYIAV 629

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKN 570
           L++C+      +G++  +Q+            + ++++  + G +    +   DM    N
Sbjct: 630 LAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPAN 689

Query: 571 TVTWNEM-----IHG 580
           +  W  +     IHG
Sbjct: 690 SDVWGALLGACRIHG 704



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 10/218 (4%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++R  L    FL N L++LY+K     +A  +F+K+  KD+ SWN ++     
Sbjct: 541 GKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGM 600

Query: 67  SDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              ++ A++LF+ M     + + VS+  +++A    GL +K    +++M  +   P  + 
Sbjct: 601 HGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMH 660

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS---LYAKCGWTKHAVPVFE 179
            A +      L       +C  ++  +    N  V  ALL    ++      + A     
Sbjct: 661 YACMVD---LLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLF 717

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
           E+   +   +T M++  A+T R  EA ++ +LM  + V
Sbjct: 718 ELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKV 755


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 199/632 (31%), Positives = 320/632 (50%), Gaps = 120/632 (18%)

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
           +DS   + +L  C R   G+++                +++H   IK  F +++ + N L
Sbjct: 17  LDSSPFAKLLDSCVRSKSGIDA----------------RRIHARIIKTQFSSEIFIQNRL 60

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVS-------------------------------WN 307
           +D Y K G  + A  +F  +P+R+  S                               WN
Sbjct: 61  VDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWN 120

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------- 360
            M++G+ Q  +  +A+     M S  F  +E +  + L AC    D+  G ++       
Sbjct: 121 AMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKS 180

Query: 361 ----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                       FD M   ++ SWN++++ Y Q+    +A+++F
Sbjct: 181 RYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVF 240

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV-ASGLIGIYSK 451
             M   GV+PD  TLA ++S+CA+   +  G Q+HA  +K   + ++ V  + L+ +Y+K
Sbjct: 241 VMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAK 300

Query: 452 CQRNELAERVFHRIP-------------------------------ELDIVCWNSMIAGL 480
           C+R   A  VF R+P                               E ++V WN++IAG 
Sbjct: 301 CRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGY 360

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV--- 537
           + N  + EA   F  +++  ++PT ++F  +L++CA L+    GRQ H QI K G+    
Sbjct: 361 TQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQS 420

Query: 538 ---NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
              +DIFVG++LI+MY KCG +      F+ M  ++ V+WN MI GYAQNGYG  A+ ++
Sbjct: 421 GEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIF 480

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           + M+ SG KPD +T + +L+ACSH+GLV+ G   F+SM+ + G+ P+ DH+TCM+D LGR
Sbjct: 481 RKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGR 540

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           AG   EA  LI  MP + D V+W  LL++C++H N+ L K  AE+L  +DP NS PY LL
Sbjct: 541 AGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLL 600

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +N+Y+ LGRW D+  VR+ M +  ++K P  S
Sbjct: 601 SNMYAELGRWKDVVRVRKQMRQRGVIKQPGCS 632



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 259/555 (46%), Gaps = 95/555 (17%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+ +  + +HA I++     + F+ NRL++ Y KC     A+ +FD+MP ++ +S+NA+L
Sbjct: 33  KSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVL 92

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           S   K   L+ A+ +F  MPE +  SWN ++S   ++   E+AL  +  M +E FV    
Sbjct: 93  SVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEY 152

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           +  S   A   L D+  G + H L+ K     ++Y+ +AL+ +Y+KCG    A   F+ M
Sbjct: 153 SFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGM 212

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           +  N V++ ++++   +     +ALE+F +M+   V  D ++L+SV+  CA         
Sbjct: 213 AVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACA--------- 263

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAK---------------- 284
                   +S    G Q+H   +K   +  DL L N+L+DMYAK                
Sbjct: 264 -------SWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316

Query: 285 ---------------NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
                             + +A ++FSN+ E++VVSWN +IAGY Q  ++ +A+ L   +
Sbjct: 317 RNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLL 376

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------------------ 359
           K     P   T  N+L AC    D+K GR+                              
Sbjct: 377 KRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMY 436

Query: 360 -----------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
                      +F+ M    V SWNAM+  Y+Q+     A+++FR+M   G KPD  T+ 
Sbjct: 437 MKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMI 496

Query: 409 IILSSCAAMGILESGKQ-VHA--ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
            +LS+C+  G++E G++  H+    L  A   D++    ++ +  +    + A  +   +
Sbjct: 497 GVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTC--MVDLLGRAGCLDEANDLIQTM 554

Query: 466 P-ELDIVCWNSMIAG 479
           P + D V W S++A 
Sbjct: 555 PMQPDNVVWGSLLAA 569



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 190/404 (47%), Gaps = 59/404 (14%)

Query: 7   GKLLHAHIL-RNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G  +HA ++ R+   +D  L N L+++Y+KC   + A+ +FD+MP +++ S  +++    
Sbjct: 271 GLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYA 330

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++  ++ A  +F  M E+NVVSWN LI+   +NG  E+A+ ++  +  E   PTH T  +
Sbjct: 331 RAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGN 390

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGL------DKNIYVANALLSLYAKCGWTKHAVPVFE 179
           +  A   L D++ GR+ H  ++K G       + +I+V N+L+ +Y KCG  +    VFE
Sbjct: 391 LLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFE 450

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            M E + V++ AM+ G A+      ALE+FR M+      D V++  VL  C+  G   E
Sbjct: 451 RMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEE 510

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
              +                H +  +LG          ++D+  + G +D A  +   +P
Sbjct: 511 GRRY---------------FHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMP 555

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
                                              +PD V   ++L AC   G+I+ G+ 
Sbjct: 556 ----------------------------------MQPDNVVWGSLLAACKVHGNIELGKY 581

Query: 360 MFDSMPS--PSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGV 400
           + + +    P  S    +LS+ Y++    K+ +++ ++M+ RGV
Sbjct: 582 VAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGV 625


>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 231/779 (29%), Positives = 368/779 (47%), Gaps = 162/779 (20%)

Query: 7   GKLLHAHILRNGLFDDTF-LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ LH   L++G+      + NRL+++YS+CN+   AQ                      
Sbjct: 25  GRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQ---------------------- 62

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                    +LF+EMP+RN  SWN +I   +++G + K+L +++ M +            
Sbjct: 63  ---------QLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPH------------ 101

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                                      K+ +  N ++S +AK G  + A  +F EM   N
Sbjct: 102 ---------------------------KDAFSWNVVISGFAKEGNLEVARRLFNEMPWKN 134

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFR---LMIRKAVSIDSVSLSSVLGVCAREG---CGVE 239
            + + +M+ G A   R  EA+ +F+   L   +    D+  L++V+G C   G   CG  
Sbjct: 135 GIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCG-- 192

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                            +Q+H   +    E D  L +SL+++Y K GD+DSA  + + + 
Sbjct: 193 -----------------KQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMK 235

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           E    S + +I+GY                 SCG   D                    R 
Sbjct: 236 EPDAFSLSALISGYA----------------SCGRMND-------------------ARR 260

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F    +  V  WN+M+S Y  +    EA++LF  M+ +GV+ D +T A +LS+C+ +GI
Sbjct: 261 IFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGI 320

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR-------------------NEL--- 457
           ++ G QVHA   K     D  + S L+ +YSKC+R                   N +   
Sbjct: 321 IDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITV 380

Query: 458 ---------AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
                    A ++F  +P   ++ WNSMI G S N+  IEA   F +M +  +   +FS 
Sbjct: 381 YSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSL 440

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           A V+S+CA +SS   G Q+ A+    G   D  + ++L++ YCKCG +   R+ FD M  
Sbjct: 441 AGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMK 500

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            + V WN M+ GYA NG+G EA+ ++  M + GV+P DITFV +L+AC H GLV+ G + 
Sbjct: 501 SDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKW 560

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F +M+LD+ + P ++HY+CM+D   RAG   +A  LI++MP K D  +W  +L  C  H 
Sbjct: 561 FYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHG 620

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           N  L K+ A+ +  LDP+NS  Y  L+ IY++   W     VR+LM +  I KD ++ +
Sbjct: 621 NNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDTSFDI 679



 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 218/798 (27%), Positives = 366/798 (45%), Gaps = 123/798 (15%)

Query: 65   CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            CK   +E   KLFD M + + V WN+++     NG   +AL+V+++M + G  PT IT  
Sbjct: 483  CKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFV 542

Query: 125  SVFKASTALLDVEHGRRC-HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS- 182
             V  A      VE GR+  + + +   ++  I   + ++ LYA+ G  + A+ + E+M  
Sbjct: 543  GVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPL 602

Query: 183  ---------------------------------EPNEVTFTAMMSGLAKT-DRVVEALEM 208
                                             +P        +SG+  T +    + ++
Sbjct: 603  KADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQV 662

Query: 209  FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD---VFAQSDNKFSRNVHGQQVHC---- 261
             +LM  K +  D+     + G    EG   E+       Q  N   R V  ++  C    
Sbjct: 663  RKLMYDKKIPKDTSF--DIAGEEGXEGLSSETKEVTKMKQRQNLVLRLVAEKKRECDERD 720

Query: 262  --------------LTIKLGFEADLHLSNSLLDMYA-----------------KN----- 285
                          + IK+GF     L N  LD+Y+                 KN     
Sbjct: 721  QKFMAARRTLLEFDMLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWN 780

Query: 286  ---------GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
                     G+++ A  +F  +P+R VVSWN MI+GY        A      M+  G  P
Sbjct: 781  IFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRP 840

Query: 337  DEVTSINMLV----AC---------VRSG----DIKTGREM----------------FDS 363
               T   +L     AC         +R+G    ++  G  +                F +
Sbjct: 841  SGFTYSTLLSFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFIT 900

Query: 364  MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            M    + SWN+++ S  +S     A++ F  M+  G  PD+ T++ +++ C+ +  LE G
Sbjct: 901  MEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKG 960

Query: 424  KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
            +Q+ A  ++     ++ V+S  I ++SKC R E + RVF  I + D V  N+MI+  + +
Sbjct: 961  EQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWH 1020

Query: 484  SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
                 A   F    +  + PT+F+ + VLS+ + L    QG Q+H+ + K G  +D+ V 
Sbjct: 1021 GFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVA 1080

Query: 544  SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
            S+L+EMY K G I  A + F  +  ++ ++WN MI G A NG   +A+ ++K+++  G  
Sbjct: 1081 SSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPP 1140

Query: 604  PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
            PD+IT   +L AC+  GLVD G+ IF+SM+ ++GV P ++HY C++D + R G   EA  
Sbjct: 1141 PDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMD 1200

Query: 664  LIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGR 723
            +++ MP +   +IW  LL +C ++ ++R  +R AE +  L+P++S PY +LA  Y   GR
Sbjct: 1201 IVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGR 1260

Query: 724  WDDLRAVRELMSENCIVK 741
            W+ L  V   M E  + K
Sbjct: 1261 WESLVRVXRAMKEKGVRK 1278



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 204/426 (47%), Gaps = 56/426 (13%)

Query: 7    GKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +HA ++RNG+   +  + N LI +Y K                              
Sbjct: 858  GKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGV--------------------------- 890

Query: 66   KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                +++A+ +F  M E +++SWN+LI +  ++G +  AL  +  M + G+ P   T+++
Sbjct: 891  ----VDYAFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVST 946

Query: 126  VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
            V    + L D+E G +   L I++G   N  V++A + L++KC   + +V VFEE+ + +
Sbjct: 947  VITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWD 1006

Query: 186  EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             V   AM+S  A       AL++F L +R+ +     +LS VL   +         +   
Sbjct: 1007 SVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVS---------ILLP 1057

Query: 246  SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
             D        G Q+H L +K G E+D+ +++SL++MYAK G +DSA   F+ +  R ++S
Sbjct: 1058 VD-------QGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLIS 1110

Query: 306  WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
            WN MI G     + +KA+E+ + +   G  PDE+T   +L+AC   G +  G  +F SM 
Sbjct: 1111 WNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSME 1170

Query: 366  S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                  P++  +  ++   S+    KEA+ +   M     +P       +L +C   G L
Sbjct: 1171 KEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPH---EPSGLIWGSLLCACEIYGDL 1227

Query: 421  ESGKQV 426
               ++V
Sbjct: 1228 RFTERV 1233



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 217/452 (48%), Gaps = 55/452 (12%)

Query: 14   ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
            +++ G    TFL NR ++LYS+    + +  +F+ +  K++ SWN  L A  +  +LE A
Sbjct: 736  LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 795

Query: 74   YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
              +FDEMP+R+VVSWN +IS  V  GL + A   +++M   G  P+  T +++    ++ 
Sbjct: 796  RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSA 855

Query: 134  LDVEHGRRCHGLVIKIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
                 G++ H  +I+ G+D  N+ V N+L+ +Y K G   +A  VF  M E + +++ ++
Sbjct: 856  C---RGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSL 912

Query: 193  MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
            +    K+     AL  F LM     S D  ++S+V+ VC+            Q   K   
Sbjct: 913  IWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSN----------LQDLEK--- 959

Query: 253  NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA- 311
               G+Q+  L I++GF ++  +S++ +D+++K   ++ +  +F  + +   V  N MI+ 
Sbjct: 960  ---GEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISS 1016

Query: 312  ----GYGQKYQSTKAIELLQRMKSC------------------------------GFEPD 337
                G+G+       + L + ++                                G E D
Sbjct: 1017 YAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESD 1076

Query: 338  EVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
             + + +++    + G I +  + F  + +  + SWN M+   + +    +A+++F+E+  
Sbjct: 1077 VIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLI 1136

Query: 398  RGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
             G  PD  TLA +L +C   G+++ G  + ++
Sbjct: 1137 GGPPPDEITLAGVLLACNVGGLVDEGLSIFSS 1168



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 13/236 (5%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF-VGSALIEMYCKCGDIYGARQFFDM 565
           S A  L SC    S ++GR +H    K G ++ +  +G+ L++MY +C  +  A+Q F+ 
Sbjct: 8   SLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEE 67

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           M  +N  +WN MI GY ++G   +++ L+  M       D  ++  +++  +  G ++V 
Sbjct: 68  MPKRNCFSWNTMIEGYLKSGSKGKSLELFDSM----PHKDAFSWNVVISGFAKEGNLEVA 123

Query: 626 VEIFNSMQLDHGV--EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             +FN M   +G+    ++  Y C        G F +  +   E  C D  V+  V+ + 
Sbjct: 124 RRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGAC 183

Query: 684 CRLHA---NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
             L A     ++  R   +    D   S   S L N+Y   G  D    V  LM E
Sbjct: 184 TNLGALDCGKQIHARIVVDEVEFD---SVLGSSLVNLYGKCGDIDSANHVLNLMKE 236


>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 618

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 191/577 (33%), Positives = 315/577 (54%), Gaps = 51/577 (8%)

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
           + ++A  VF+++  P++    + ++  ++     EAL  F  M +  V I   ++  +  
Sbjct: 45  FIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFK 104

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            CA     +  DV             G+QVH L I+ GF + +   N+L++ YAK  D+ 
Sbjct: 105 SCASL---LAIDV-------------GKQVHSLVIRYGFHSSVFCQNALINFYAKINDLG 148

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
           SAE+IF  +  +  +++N +I+ Y                                    
Sbjct: 149 SAELIFDGILVKDTIAYNCLISAYS----------------------------------- 173

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           RSG++   RE+FD M   S+ SWNAM+S Y+Q+ ++ +   +F+ MQ    +P+  TLA 
Sbjct: 174 RSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLAT 233

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +LS CA +G LE G ++   +       +  V++ ++ +Y KC   +    VF  +   D
Sbjct: 234 VLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRD 293

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W++MIAG + N    EA   F+ M+  ++ P   +  +VLS+CA+L S   G ++ +
Sbjct: 294 VVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGS 353

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            +E  G +++++V SAL+ MY KCG+I  ARQ FD +  ++ VTWN MI G A NG+ ++
Sbjct: 354 YVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAED 413

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+ LY  M    VKP++ITFV ++TAC+H+G V++G+E F SM+ DH + P ++H+ C++
Sbjct: 414 AIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIV 473

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
           D   R+G   +A   I  M  + + VIW  LLS+ R+H NV LA+ A ++L  L+P NS 
Sbjct: 474 DLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSG 533

Query: 710 PYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            Y +L+NIY+S GRW +   VR+LM +  + K  AYS
Sbjct: 534 NYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYS 570



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 218/412 (52%), Gaps = 24/412 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H+ ++R G     F  N LI  Y+K N+  SA+ +FD +  KD  ++N ++SA  +
Sbjct: 115 GKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSR 174

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S ++  A +LFD+M +R++VSWN +IS   +NG   K   ++ +M +E   P  ITLA+V
Sbjct: 175 SGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATV 234

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 L D+E G R   L     L  N+ V+ A+L +Y KCG       VF+ M+  + 
Sbjct: 235 LSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDV 294

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT++AM++G A+  R  EALE+F  M    +  + V+L SVL  CA+ G  VE+      
Sbjct: 295 VTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLG-SVET------ 347

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+++       G  ++++++++LL MY+K G++  A  IF  LP+R  V+W
Sbjct: 348 ---------GERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTW 398

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N MI G      +  AI L  RMK    +P+ +T + ++ AC  +G ++ G E F SM  
Sbjct: 399 NSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRS 458

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
               SP++  +  ++  + +S    +A +    M+   V+P+      +LS+
Sbjct: 459 DHNISPNIEHFACIVDLFCRSGRLIDAYEFICRME---VEPNVVIWGTLLSA 507



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 197/420 (46%), Gaps = 82/420 (19%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           +++A ++FD++P  +     + I+A  R  L  +AL  +  M          T+  +FK+
Sbjct: 46  IQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKS 105

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
             +LL ++ G++ H LVI+ G   +++  NAL++ YAK      A  +F+ +   + + +
Sbjct: 106 CASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAY 165

Query: 190 TAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDS--------------------------- 221
             ++S  +++  V+ A E+F ++  R  VS ++                           
Sbjct: 166 NCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCE 225

Query: 222 ---VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
              ++L++VL +CA+ G           D +      G ++  L       +++ +S ++
Sbjct: 226 PNEITLATVLSICAKLG-----------DLEM-----GLRIKKLNDNKNLGSNMIVSTAM 269

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           L+MY K G +D   ++F ++  R VV+W+ MIAGY Q  +S +A+EL + MKS   +P++
Sbjct: 270 LEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPND 329

Query: 339 VTSINMLVACVRSGDIKTG-----------------------------------REMFDS 363
           VT +++L AC + G ++TG                                   R++FD 
Sbjct: 330 VTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDK 389

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +P     +WN+M+   + +   ++AI L+  M+   VKP+  T   ++++C   G +E G
Sbjct: 390 LPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELG 449


>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 205/647 (31%), Positives = 334/647 (51%), Gaps = 61/647 (9%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP----VFEEMSEPNEVTFTAMMSGLAK 198
           HG +++  L  +  VA  L++L A    ++H +P    VF+ M++P  + +  M+ G   
Sbjct: 38  HGRLVRAHLGSDPCVAGRLVTLLAS-PVSRHDMPYARKVFDRMAQPTAIVWNCMIRGYNS 96

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR---NVH 255
               ++ALE+FR M R  VS D+ ++++V                AQS   F+       
Sbjct: 97  CHAPMDALELFRAMRRSGVSPDNYTMAAV----------------AQSSAAFASWKGRAT 140

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G  VH L  ++GF +DL + + L++ Y  +  ++ A  +F  + ER VVSW +MI+ + Q
Sbjct: 141 GDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQ 200

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------------- 348
             Q    +  L  M+S G +P+++T I++L AC                           
Sbjct: 201 CGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDI 260

Query: 349 --------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                   V+ G +    + F  MP  +  SWN ++  + Q+  HKEA+ +F EM   GV
Sbjct: 261 RNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGV 320

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
            PD  TL  +LS+ A +G L+ G+ +H        H D  + + LI +Y+KC     AE 
Sbjct: 321 IPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEI 380

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           +F  +   DIV W +M+ G         AF  F  M+  ++  ++ +  ++LS+C++L +
Sbjct: 381 IFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGA 440

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
             +GR++H+ I++     D+++ SAL++MY KCG I  A + F  M  K T+ WN MI G
Sbjct: 441 LDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGG 500

Query: 581 YAQNGYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
            A  G G EAV L++ ++     KPD IT   +L AC+H G+VD G+  FN M L  G+ 
Sbjct: 501 LASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLM-LTLGIV 559

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P  +HY C++D LGRAG   EA   I +MP + +PVIW  LL++CR+H  + L K   + 
Sbjct: 560 PDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQH 619

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +  L P +   + L++N+++  G+WDD+  VR +M    + K P +S
Sbjct: 620 IIDLAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHS 666



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 249/559 (44%), Gaps = 56/559 (10%)

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           +L++     D+ +A K+FD M +   + WN +I           AL ++  M   G  P 
Sbjct: 59  LLASPVSRHDMPYARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPD 118

Query: 120 HITLASVFKASTALLDVE---HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           + T+A+V ++S A    +    G   H LV +IG   +++V + L++ Y      + A  
Sbjct: 119 NYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARK 178

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VFEEM E + V++T M+S  A+  +    L     M  +    + +++ S+L  C +   
Sbjct: 179 VFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQ--- 235

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                   ++ +K      G  V+    + G EAD+ + N+L+ MY K G M  A   F 
Sbjct: 236 -------VRAVDK------GLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFK 282

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            +P R+  SWN +I G+ Q  +  +A+ + + M S G  PD +T +++L    + GD++ 
Sbjct: 283 GMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQ 342

Query: 357 GREM-----------------------------------FDSMPSPSVSSWNAMLSSYSQ 381
           GR +                                   F++M    + SW AM+  Y +
Sbjct: 343 GRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVK 402

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
               + A  LF +M+ R V      L  +LS+C+ +G L+ G+++H+   + +   D ++
Sbjct: 403 GLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWL 462

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ-MRQNE 500
            S L+ +Y+KC   + A  +F R+     + WN+MI GL+      EA   F+Q ++  +
Sbjct: 463 ESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRD 522

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
             P   +   VL +C  +    +G      +   G V D      ++++  + G +  A 
Sbjct: 523 PKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYGCIVDLLGRAGLLDEAY 582

Query: 561 QFFDMMHGK-NTVTWNEMI 578
            F   M  + N V W  ++
Sbjct: 583 NFIQKMPIQPNPVIWGSLL 601



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 221/515 (42%), Gaps = 84/515 (16%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K    G  +HA + R G   D F+ + LI  Y                            
Sbjct: 136 KGRATGDAVHALVQRIGFASDLFVMSGLINFYGA-------------------------- 169

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                S  +E A K+F+EM ER+VVSW  +ISA  + G  +  L   ++M +EG  P  I
Sbjct: 170 -----SKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKI 224

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ S+  A   +  V+ G   +  V + G++ ++ + NAL+ +Y KCG    A   F+ M
Sbjct: 225 TIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGM 284

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              N  ++  ++ G  +  +  EAL MF  M+   V  D ++L SVL   A+ G     D
Sbjct: 285 PIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLG-----D 339

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           +  Q        +   ++HC         D+ L NSL++MYAK GDM +AE+IF N+  R
Sbjct: 340 L--QQGRYLHNYIKDHEIHC---------DIILQNSLINMYAKCGDMAAAEIIFENMARR 388

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--- 358
            +VSW  M+ GY +  Q   A  L   MK       E+  +++L AC + G +  GR   
Sbjct: 389 DIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIH 448

Query: 359 --------------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                           E+F  M      +WNAM+   +     K
Sbjct: 449 SYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGK 508

Query: 387 EAIKLFRE-MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           EA+ LF + ++ R  KPD  TL ++L +C  +G+++ G       L      DN     +
Sbjct: 509 EAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYGCI 568

Query: 446 IGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           + +  +    + A     ++P + + V W S++A 
Sbjct: 569 VDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAA 603



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 183/372 (49%), Gaps = 24/372 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA++    K   +  A+K F  MP RN  SWN LI   V+NG  ++AL+++ +M ++G +
Sbjct: 262 NALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVI 321

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  ITL SV      L D++ GR  H  +    +  +I + N+L+++YAKCG    A  +
Sbjct: 322 PDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEII 381

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           FE M+  + V++TAM+ G  K  +   A  +F  M  + V    ++L S+L  C++ G  
Sbjct: 382 FENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGAL 441

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
            +                G+++H    +     D+ L ++L+DMYAK G +D+A  IFS 
Sbjct: 442 DK----------------GREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSR 485

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELL-QRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
           +  +  ++WN MI G   + Q  +A+ L  Q +K    +PD +T   +L AC   G +  
Sbjct: 486 MRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDE 545

Query: 357 GREMFDSMPS----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           G   F+ M +    P    +  ++    ++    EA    ++M    ++P+      +L+
Sbjct: 546 GLHYFNLMLTLGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMP---IQPNPVIWGSLLA 602

Query: 413 SCAAMGILESGK 424
           +C     +E GK
Sbjct: 603 ACRVHHRMELGK 614


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 223/695 (32%), Positives = 349/695 (50%), Gaps = 83/695 (11%)

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCGWTKHAVPV 177
              L    K++ AL  +   R  HG  ++  L       V+NALL+ YA+CG    A+ +
Sbjct: 57  RFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALAL 116

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+ M   + VTF ++++ L    R + AL+  R M+ +   + S +L SVL  C+     
Sbjct: 117 FDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSH---- 172

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLS-NSLLDMYAKNGDMDSAEVIF 295
                    D +      G++ H   +K GF + D   + N+LL MYA+ G +D A+ +F
Sbjct: 173 ------LAEDLRL-----GREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLF 221

Query: 296 -----SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
                +++P   VV+WN M++   Q  +  +AIE+L  M + G  PD VT  + L AC +
Sbjct: 222 GSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQ 281

Query: 351 SGDIKTGREM------------------------------------FDSMPSP--SVSSW 372
              +  GREM                                    FD +P+    +  W
Sbjct: 282 LEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLW 341

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           NAM+  Y+Q+   ++A++LF  M+   GV P  TT+A +L SCA        + VH   +
Sbjct: 342 NAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVV 401

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           K     + +V + L+ +Y++    + A  +F  I   D+V WN++I G  +     +AF 
Sbjct: 402 KRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQ 461

Query: 492 FFKQMRQNEMY------------------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
             ++M+Q   +                  P   +  T+L  CA L++  +G+++H    +
Sbjct: 462 LVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVR 521

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
               +D+ VGSAL++MY KCG +  +R  FD +  +N +TWN +I  Y  +G GDEA+ L
Sbjct: 522 HALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIAL 581

Query: 594 YKDMIASG-VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
           +  M+AS   KP+++TF+A L ACSHSG+VD G+E+F SM+ +HGVEP  D + C +D L
Sbjct: 582 FDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDIL 641

Query: 653 GRAGHFHEAEMLIDEM-PCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           GRAG   EA  +I  M P +     W   L +CRLH NV L + AAE LF L+P  ++ Y
Sbjct: 642 GRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHY 701

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LL NIYS+ G W+    VR  M +  + K+P  S
Sbjct: 702 VLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCS 736



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 240/525 (45%), Gaps = 82/525 (15%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA+L+A  +  DL  A  LFD MP R+ V++N+LI+AL        AL     M  EG  
Sbjct: 98  NALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHP 157

Query: 118 PTHITLASVFKASTALL-DVEHGRRCHGLVIKIG-LDKNIYVA-NALLSLYAKCGWTKHA 174
            T  TL SV  A + L  D+  GR  H   +K G LD +   A NALLS+YA+ G    A
Sbjct: 158 LTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDA 217

Query: 175 VPVFEEMSEPN-----EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
             +F  +   +      VT+  M+S L ++ R  EA+E+   M+ + V  D V+ +S L 
Sbjct: 218 QTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALP 277

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK-LGFEADLHLSNSLLDMYAKNGDM 288
            C                ++      G+++H   +K     A+  ++++L+DMYA +  +
Sbjct: 278 AC----------------SQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERV 321

Query: 289 DSAEVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSINML 345
            +A ++F  +P  ER +  WN MI GY Q      A+EL  RM++  G  P E T   +L
Sbjct: 322 GAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVL 381

Query: 346 VACVRS-----------------------------------GDIKTGREMFDSMPSPSVS 370
            +C RS                                   GD+   R +F ++    V 
Sbjct: 382 PSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVV 441

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRG------------------VKPDRTTLAIILS 412
           SWN +++      + ++A +L REMQ +G                  V P+  TL  +L 
Sbjct: 442 SWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLP 501

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
            CA +     GK++H  +++ A   D  V S L+ +Y+KC    L+  VF R+P  +++ 
Sbjct: 502 GCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVIT 561

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCA 516
           WN +I    ++ L  EA   F +M   +E  P + +F   L++C+
Sbjct: 562 WNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACS 606



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 180/377 (47%), Gaps = 45/377 (11%)

Query: 7   GKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ +HA++L++  L  ++F+ + L+++Y+      +A+ +FD +P               
Sbjct: 288 GREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAG------------- 334

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLA 124
                           ER +  WN +I    + GL+E AL ++ +M  E G VP+  T+A
Sbjct: 335 ----------------ERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIA 378

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            V  +             HG V+K G+  N +V NAL+ LYA+ G    A  +F  +   
Sbjct: 379 GVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPR 438

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV-- 242
           + V++  +++G      + +A ++ R M ++    D+ +   + G  A E   V +++  
Sbjct: 439 DVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAG--ADEEPVVPNNITL 496

Query: 243 --FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                     +    G+++H   ++   ++D+ + ++L+DMYAK G +  +  +F  LP 
Sbjct: 497 MTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPR 556

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           R+V++WNV+I  YG      +AI L  RM  S   +P+EVT I  L AC  SG +  G E
Sbjct: 557 RNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLE 616

Query: 360 MFDSM-------PSPSV 369
           MF SM       P+P +
Sbjct: 617 MFRSMKRNHGVEPTPDL 633



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 199/480 (41%), Gaps = 102/480 (21%)

Query: 7   GKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           G+  HA  L+NG  D  + F  N L+ +Y++      AQ LF  +   D+          
Sbjct: 180 GREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDV---------- 229

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                           P   VV+WN ++S LV++G   +A+ V   M   G  P  +T A
Sbjct: 230 ----------------PGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFA 273

Query: 125 SVFKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHAVPVFE--EM 181
           S   A + L  +  GR  H  V+K   L  N +VA+AL+ +YA       A  VF+    
Sbjct: 274 SALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPA 333

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            E     + AM+ G A+     +ALE+F R+     V     +++ VL  CAR      S
Sbjct: 334 GERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCAR------S 387

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           + FA            + VH   +K G   +  + N+L+D+YA+ GDMD+A  IF+ +  
Sbjct: 388 ETFAGK----------EAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEP 437

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG------------------FEPDEVTSI 342
           R VVSWN +I G   +     A +L++ M+  G                    P+ +T +
Sbjct: 438 RDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLM 497

Query: 343 NMLVAC-----------------------------------VRSGDIKTGREMFDSMPSP 367
            +L  C                                    + G +   R +FD +P  
Sbjct: 498 TLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRR 557

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLF-REMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           +V +WN ++ +Y       EAI LF R +     KP+  T    L++C+  G+++ G ++
Sbjct: 558 NVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEM 617



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 119/236 (50%), Gaps = 10/236 (4%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLK--TASHIDNYVASGLIGIYSKCQRNELAER 460
           DR  L     S AA+  L + + +H A+L+          V++ L+  Y++C     A  
Sbjct: 56  DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           +F  +P  D V +NS+IA L L    + A    + M       T F+  +VL +C+ L+ 
Sbjct: 116 LFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAE 175

Query: 521 SFQ-GRQVHAQIEKDGYVN--DIFVGSALIEMYCKCGDIYGARQFFDMM-----HGKNTV 572
             + GR+ HA   K+G+++  + F  +AL+ MY + G +  A+  F  +      G   V
Sbjct: 176 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVV 235

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           TWN M+    Q+G   EA+ +  DM+A GV+PD +TF + L ACS   ++ +G E+
Sbjct: 236 TWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREM 291



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/344 (22%), Positives = 151/344 (43%), Gaps = 34/344 (9%)

Query: 6   AGK-LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           AGK  +H ++++ G+ D+ F+ N L++LY++  +  +A+ +F  +  +D+ SWN +++  
Sbjct: 391 AGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGC 450

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                +  A++L  EM ++          A   +G+             E  VP +ITL 
Sbjct: 451 VVQGHIRDAFQLVREMQQQ-----GRFTDAATEDGIA--------GADEEPVVPNNITLM 497

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++      L     G+  HG  ++  LD ++ V +AL+ +YAKCG    +  VF+ +   
Sbjct: 498 TLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRR 557

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
           N +T+  ++          EA+ +F R++       + V+  + L  C+  G     D  
Sbjct: 558 NVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGM---VDRG 614

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ER 301
            +      RN HG +            DLH     +D+  + G +D A  I S++   E+
Sbjct: 615 LEMFRSMKRN-HGVEP---------TPDLH--ACAVDILGRAGRLDEAYRIISSMEPGEQ 662

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
            V +W+  +     +     A+  +   +    EPDE +   +L
Sbjct: 663 QVSAWSSFLGAC--RLHRNVALGEIAAERLFELEPDEASHYVLL 704


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 214/664 (32%), Positives = 342/664 (51%), Gaps = 57/664 (8%)

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL---YAKCGWTKHAVPVFEEM 181
           S+ +  T+   + + ++ H   I +GL  + Y  + L SL   YA CG   HA  +F+E+
Sbjct: 23  SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDEL 82

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI-DSVSLSSVLGVCAREGCGVES 240
             P+  ++ AM+     +    +AL +F  M+       D+ +   V+  C         
Sbjct: 83  RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACG-------- 134

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                    +     G  +H  T+  GF++D  + NSL+ MY   G+M+ A  +F  + E
Sbjct: 135 --------DYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRE 186

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE- 359
           R++VSWN MI GY +     +A+ +   M   G EPD  T +++L  C    +++ GR  
Sbjct: 187 RTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRV 246

Query: 360 ----------------------------------MFDSMPSPSVSSWNAMLSSYSQSENH 385
                                             +F  M    V SW  M++ Y  + + 
Sbjct: 247 HALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDA 306

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           + A+ L + MQF  VKP+  TLA +LS+CA++  L+ G+ +H  +++     +  V + L
Sbjct: 307 RSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETAL 366

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +Y+KC    L+ RVF +  +     WN++I+G   N L  +A   FKQM    + P  
Sbjct: 367 IDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPND 426

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +  ++L + A L+   Q R +H  + + G+++ I V + LI++Y KCG +  A   F+ 
Sbjct: 427 ATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNG 486

Query: 566 M--HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           +    K+ +TW+ +I GY  +G+G+ A+ L+  M+ SGVKP++ITF +IL ACSH+GLVD
Sbjct: 487 IPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVD 546

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G+ +F  M  D+ +    DHYTC+ID LGRAG   EA  LI  M  + +  +W  LL S
Sbjct: 547 EGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGS 606

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           C +H NV L + AA+ LF L+P N+  Y LLANIYS++GRW D   VR +M+   + K P
Sbjct: 607 CVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTP 666

Query: 744 AYSL 747
           A+SL
Sbjct: 667 AHSL 670



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 230/482 (47%), Gaps = 54/482 (11%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF-VPTHITLASVFKAST 131
           A KLFDE+   ++ SWN +I     +GL   AL ++ +M   G   P + T   V KA  
Sbjct: 75  ARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACG 134

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
             L  E G   H   +  G D + +V N+L+++Y  CG  + A  VF+ M E   V++  
Sbjct: 135 DYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNT 194

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           M++G  K   V EAL +F  MI K +  D  ++ SVL VC+      E +V         
Sbjct: 195 MINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLK---ELEV--------- 242

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G++VH L        D+ + NSLLDMYAK G+MD A++IF  + +R VVSW  M+ 
Sbjct: 243 ----GRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMN 298

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------------- 358
           GY     +  A+ L Q M+    +P+ VT  ++L AC     +K GR             
Sbjct: 299 GYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLES 358

Query: 359 ----------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                  +F        + WNA++S    +   ++AI+LF++M 
Sbjct: 359 EVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQML 418

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
              V P+  TL  +L + A +  L+  + +H   +++       VA+ LI IYSKC   E
Sbjct: 419 MEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLE 478

Query: 457 LAERVFHRIP--ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            A  +F+ IP  + DI+ W+++IAG  ++     A   F QM Q+ + P + +F ++L +
Sbjct: 479 SAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHA 538

Query: 515 CA 516
           C+
Sbjct: 539 CS 540



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 210/419 (50%), Gaps = 31/419 (7%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +DI  WN++L    K  +++ A  +F EM +R+VVSW  +++  + NG    AL +   M
Sbjct: 257 EDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMM 316

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
             E   P  +TLASV  A  +L  ++HGR  HG  I+  L+  + V  AL+ +YAKC   
Sbjct: 317 QFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNV 376

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             +  VF + S+     + A++SG        +A+E+F+ M+ +AV  +  +L+S+L   
Sbjct: 377 NLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAY 436

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A             +D + +RN+HG       I+ GF + + ++  L+D+Y+K G ++SA
Sbjct: 437 A-----------FLTDLQQARNMHGY-----LIRSGFLSRIEVATILIDIYSKCGSLESA 480

Query: 292 EVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
             IF+ +P  ++ +++W+ +IAGYG       AI L  +M   G +P+E+T  ++L AC 
Sbjct: 481 HNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACS 540

Query: 350 RSGDIKTGREMF-----DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
            +G +  G  +F     D+  S     +  ++    ++   +EA +L R M FR   P+ 
Sbjct: 541 HAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFR---PNH 597

Query: 405 TTLAIILSSCAAMGILESGKQVHAASL--KTASHIDNYVASGLIGIYSKCQRNELAERV 461
                +L SC     +E G +V A  L      +  NYV   L  IYS   R   AE V
Sbjct: 598 AVWGALLGSCVIHENVELG-EVAAKWLFELEPGNTGNYVL--LANIYSAVGRWRDAEHV 653



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 215/454 (47%), Gaps = 84/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G L+HA  + +G   D F+ N L+ +Y  C                              
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCG----------------------------- 172

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             ++E A ++FD M ER +VSWN +I+   +NG  ++AL V++ M  +G  P   T+ SV
Sbjct: 173 --EMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSV 230

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               + L ++E GRR H LV    L ++I V N+LL +YAKCG    A  +F EM + + 
Sbjct: 231 LPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDV 290

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T MM+G         AL + ++M  ++V  + V+L+SVL  CA              
Sbjct: 291 VSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACA-------------- 336

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            + +S   HG+ +H   I+   E+++ +  +L+DMYAK  +++ +  +FS   ++    W
Sbjct: 337 -SLYSLK-HGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPW 394

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----------------CVR 350
           N +I+G      S KAIEL ++M     +P++ T  ++L A                 +R
Sbjct: 395 NAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIR 454

Query: 351 S-------------------GDIKTGREMFDSMPS--PSVSSWNAMLSSYSQSENHKEAI 389
           S                   G +++   +F+ +P     + +W+A+++ Y    + + AI
Sbjct: 455 SGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAI 514

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            LF +M   GVKP+  T   IL +C+  G+++ G
Sbjct: 515 SLFDQMVQSGVKPNEITFTSILHACSHAGLVDEG 548



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 6/108 (5%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH--KDIYSWNAILSAQCKS 67
           +H +++R+G      +   LI++YSKC +  SA ++F+ +P   KDI +W+AI++     
Sbjct: 448 MHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMH 507

Query: 68  DDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
              E A  LFD+M +  V    +++ +++ A    GL ++ L ++  M
Sbjct: 508 GHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFM 555


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 224/695 (32%), Positives = 349/695 (50%), Gaps = 83/695 (11%)

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIY--VANALLSLYAKCGWTKHAVPV 177
           H  L    K++ AL  +   R  HG  ++  L       VANALL+ YA+CG    A+ +
Sbjct: 59  HFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALAL 118

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  M   + VTF ++++ L    R + AL+  R M+ +   + S +L SVL  C+     
Sbjct: 119 FNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSH---- 174

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLS-NSLLDMYAKNGDMDSAEVIF 295
                    D +      G++ H   +K GF + D   + N+LL MYA+ G +D A+++F
Sbjct: 175 ------LAEDLRL-----GREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLF 223

Query: 296 SNL-----PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
            ++     P   VV+WN M++   Q  +  +AIE++  M + G  PD +T  + L AC +
Sbjct: 224 GSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQ 283

Query: 351 SGDIKTGREM------------------------------------FDSMPSP--SVSSW 372
              +  GREM                                    FD +P     +  W
Sbjct: 284 LEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLW 343

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           NAM+  Y+Q+   +EA++LF  M+   GV P  TT+A +L +CA        + VH   L
Sbjct: 344 NAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVL 403

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           K     + +V + L+ +Y++    E A  +F  I   D+V WN++I G  +     +AF 
Sbjct: 404 KRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQ 463

Query: 492 FFKQMRQNEMY------------------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
             ++M+Q   +                  P   +  T+L  CA L++  +G+++H    +
Sbjct: 464 LVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMR 523

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
               +DI VGSAL++MY KCG +  +R  FD +  +N +TWN +I  Y  +G GDEA+ L
Sbjct: 524 HALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIAL 583

Query: 594 YKDMIASG-VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
           +  M+ S   KP+++TF+A L ACSHSG+VD G+E+F+SM+ +HGV+P  D + C +D L
Sbjct: 584 FDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDIL 643

Query: 653 GRAGHFHEAEMLIDEM-PCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           GRAG   EA  +I  M P +     W   L +CRLH NV L + AAE LF+L+P  ++ Y
Sbjct: 644 GRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHY 703

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LL NIYS+ G W+    VR  M +  + K+P  S
Sbjct: 704 VLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCS 738



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 239/525 (45%), Gaps = 82/525 (15%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA+L+A  +  DL  A  LF+ MP R+ V++N+LI+AL        AL     M  EG  
Sbjct: 100 NALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHP 159

Query: 118 PTHITLASVFKASTALL-DVEHGRRCHGLVIKIG-LDKNIYVA-NALLSLYAKCGWTKHA 174
            +  TL SV  A + L  D+  GR  H   +K G LD +   A NALLS+YA+ G    A
Sbjct: 160 LSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDA 219

Query: 175 VPVFEEMSEPNE-----VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
             +F  +   +      VT+  M+S L ++ R  EA+E+   M+ + V  D ++ +S L 
Sbjct: 220 QMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALP 279

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK-LGFEADLHLSNSLLDMYAKNGDM 288
            C                ++      G+++H   +K     A+  ++++L+DMYA +  +
Sbjct: 280 AC----------------SQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERV 323

Query: 289 DSAEVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSINML 345
             A  +F  +P   R +  WN M+ GY Q     +A+EL  RM++  G  P E T   +L
Sbjct: 324 GVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVL 383

Query: 346 VACVRS-----------------------------------GDIKTGREMFDSMPSPSVS 370
            AC RS                                   GD++  R +F ++    V 
Sbjct: 384 PACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVV 443

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRG------------------VKPDRTTLAIILS 412
           SWN +++      +  +A +L REMQ +G                  V P+  TL  +L 
Sbjct: 444 SWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLP 503

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
            CA +     GK++H  +++ A   D  V S L+ +Y+KC    L+  VF R+P+ +++ 
Sbjct: 504 GCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVIT 563

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCA 516
           WN +I    ++ L  EA   F +M   NE  P + +F   L++C+
Sbjct: 564 WNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACS 608



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 198/480 (41%), Gaps = 102/480 (21%)

Query: 7   GKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           G+  HA  L+NG  D  + F  N L+ +Y++      AQ LF  +   D           
Sbjct: 182 GREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTD----------- 230

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                           P   VV+WN ++S LV++G   +A+ V   M   G  P  IT A
Sbjct: 231 ---------------SPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFA 275

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           S   A + L  +  GR  H  V+K   L  N +VA+AL+ +YA       A  VF+ +  
Sbjct: 276 SALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPG 335

Query: 184 PNEV--TFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            +     + AM+ G A+     EALE+F R+     V     +++ VL  CAR      S
Sbjct: 336 GHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACAR------S 389

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           + FA            + VH   +K G   +  + N+L+D+YA+ GDM++A  IF+ +  
Sbjct: 390 ETFAGK----------EAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEP 439

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG------------------FEPDEVTSI 342
           R VVSWN +I G   +     A +L++ M+  G                    P+ VT +
Sbjct: 440 RDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLM 499

Query: 343 NMLVAC-----------------------------------VRSGDIKTGREMFDSMPSP 367
            +L  C                                    + G +   R +FD +P  
Sbjct: 500 TLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKR 559

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGILESGKQV 426
           +V +WN ++ +Y       EAI LF  M      KP+  T    L++C+  G+++ G ++
Sbjct: 560 NVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMEL 619



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 186/423 (43%), Gaps = 51/423 (12%)

Query: 6   AGK-LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           AGK  +H ++L+ G+ D+ F+ N L++LY++  +  +A+ +F  +  +D+ SWN +++  
Sbjct: 393 AGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGC 452

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                +  A++L  EM ++          A   +G+             E  VP ++TL 
Sbjct: 453 VVQGHIHDAFQLVREMQQQ-----GRFTDATTEDGIA--------GTDEEPVVPNNVTLM 499

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++      L     G+  HG  ++  LD +I V +AL+ +YAKCG    +  VF+ + + 
Sbjct: 500 TLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKR 559

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
           N +T+  ++          EA+ +F R+++      + V+  + L  C+  G     D  
Sbjct: 560 NVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGM---VDRG 616

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ER 301
            +  +   RN HG Q            DLH     +D+  + G +D A  I +++   E+
Sbjct: 617 MELFHSMKRN-HGVQP---------TPDLH--ACAVDILGRAGRLDEAYSIITSMEPGEQ 664

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI-KTGREM 360
            V +W+  + G  + +++    E+    +    EPDE +   +L     +  + +   E+
Sbjct: 665 QVSAWSSFL-GACRLHRNVPLGEIAAE-RLFQLEPDEASHYVLLCNIYSAAGLWEKSSEV 722

Query: 361 FDSMPSPSVS-----SW---NAMLSSYSQSEN--------HKEAIKLFREMQFRGVKPDR 404
            + M    VS     SW   + ++  +   E+        H     L+  M+ +G  PD 
Sbjct: 723 RNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDT 782

Query: 405 TTL 407
           +++
Sbjct: 783 SSV 785



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 66/123 (53%), Gaps = 6/123 (4%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A   GK +H + +R+ L  D  + + L+++Y+KC     ++ +FD++P +++ +WN ++ 
Sbjct: 510 APAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIM 569

Query: 63  AQCKSDDLEFAYKLFDEM-----PERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGF 116
           A       + A  LFD M      + N V++   ++A   +G+ ++ + +++ M  N G 
Sbjct: 570 AYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGV 629

Query: 117 VPT 119
            PT
Sbjct: 630 QPT 632


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 210/693 (30%), Positives = 354/693 (51%), Gaps = 58/693 (8%)

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNI 155
           + NG   KA+S    M ++G  P   T +   K        + G   H  + +  L  + 
Sbjct: 42  INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              N+L+SLY+KCG  + A  +F  M    + ++++AM+S  A  +    AL  F  MI 
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLH 273
                +    ++    C+       ++  +  D+ F             IK G+ ++D+ 
Sbjct: 162 NGYYPNEYCFAAATRACS------TAEFVSVGDSIFG----------FVIKTGYLQSDVC 205

Query: 274 LSNSLLDMYAKN-GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
           +   L+DM+ K  GD+ SA  +F  +PER+ V+W +MI    Q   + +AI+L   M   
Sbjct: 206 VGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFS 265

Query: 333 GFEPDEVTS--------------------------------------INMLVACVRSGDI 354
           G+EPD  T                                       INM   C   G +
Sbjct: 266 GYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSM 325

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENH-KEAIKLFREMQFRGVKPDRTTLAIILSS 413
              R++FD +   +V SW AM++ Y Q   + +EA+ LFR M    V P+  T +  L +
Sbjct: 326 CAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKA 385

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           CA +  L  G+QV   ++K      N VA+ LI +Y++  R + A + F  + E +++ +
Sbjct: 386 CANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISY 445

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           N++I   + N    EA   F ++    M  + F+FA++LS  A + +  +G Q+HA++ K
Sbjct: 446 NTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIK 505

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G   +  V +ALI MY +CG+I  A Q F+ M  +N ++W  +I G+A++G+  +A+ L
Sbjct: 506 SGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALEL 565

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +  M+  GV+P+++T++A+L+ACSH GLV+ G + F SM  +HGV P ++HY C++D LG
Sbjct: 566 FHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILG 625

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           R+G   EA   I+ MP K D ++W   L +CR+H N+ L K AA+ +   +P + A Y L
Sbjct: 626 RSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYIL 685

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L+N+Y+S+ +WD++  +R+ M E  ++K+   S
Sbjct: 686 LSNLYASISKWDEVSNIRKAMKEKXLIKEAGCS 718



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 156/615 (25%), Positives = 274/615 (44%), Gaps = 89/615 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G L+H  + ++ L  D+   N LI LYSKC     A  +F  M                 
Sbjct: 85  GTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMG---------------- 128

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                           R+++SW+ ++S    N +  +AL  +  M   G+ P     A+ 
Sbjct: 129 --------------SSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAA 174

Query: 127 FKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKC-GWTKHAVPVFEEMSEP 184
            +A +    V  G    G VIK G L  ++ V   L+ ++ K  G    A  VFE+M E 
Sbjct: 175 TRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPER 234

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N VT+T M++ L +     EA+++F  MI      D  +LS V+  CA            
Sbjct: 235 NAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACA------------ 282

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIFSNLPER 301
                    + GQQ+H   I+ G   D  +   L++MYAK   +G M +A  IF  + + 
Sbjct: 283 ----NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338

Query: 302 SVVSWNVMIAGYGQK-YQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------ 348
           +V SW  MI GY QK     +A++L + M      P+  T  + L AC            
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   RSG I   R+ FD +   ++ S+N ++ +Y+++ N 
Sbjct: 399 FTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNS 458

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +EA++LF E++ +G+     T A +LS  A++G +  G+Q+HA  +K+   ++  V + L
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNAL 518

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YS+C   E A +VF  + + +++ W S+I G + +    +A   F +M +  + P +
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNE 578

Query: 506 FSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            ++  VLS+C+ +    +G +   +   + G +  +   + ++++  + G +  A QF +
Sbjct: 579 VTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFIN 638

Query: 565 MMHGK-NTVTWNEMI 578
            M  K + + W   +
Sbjct: 639 SMPYKADALVWRTFL 653



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 205/431 (47%), Gaps = 55/431 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH+  +R+GL  D  +   LI +Y+KC                      ++  + C 
Sbjct: 290 GQQLHSQAIRHGLTLDRCVGCCLINMYAKC----------------------SVDGSMCA 327

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALV-RNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                 A K+FD++ + NV SW  +I+  V + G +E+AL ++  M     +P H T +S
Sbjct: 328 ------ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             KA   L  +  G +     +K+G      VAN+L+S+YA+ G    A   F+ + E N
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++  ++   AK     EALE+F  +  + +   + + +S+L   A  G   +      
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGK------ 495

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+Q+H   IK G + +  + N+L+ MY++ G+++SA  +F ++ +R+V+S
Sbjct: 496 ----------GEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVIS 545

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  +I G+ +   +T+A+EL  +M   G  P+EVT I +L AC   G +  G + F SM 
Sbjct: 546 WTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMY 605

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           +     P +  +  ++    +S +  EAI+    M +   K D       L +C   G L
Sbjct: 606 TEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPY---KADALVWRTFLGACRVHGNL 662

Query: 421 ESGKQVHAASL 431
           E GK  HAA +
Sbjct: 663 ELGK--HAAKM 671



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 191/423 (45%), Gaps = 54/423 (12%)

Query: 367 PSVSSWNAMLSSYSQSENH---KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           P+ ++ N +     Q  N+    +AI     M  +G  PD  T ++ L  C      + G
Sbjct: 26  PTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIG 85

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI-PELDIVCWNSMIAGLSL 482
             VH    ++   +D+   + LI +YSKC + E A  +F  +    D++ W++M++  + 
Sbjct: 86  TLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFAN 145

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV-NDIF 541
           N++   A + F  M +N  YP ++ FA    +C+       G  +   + K GY+ +D+ 
Sbjct: 146 NNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVC 205

Query: 542 VGSALIEMYCKC-GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           VG  LI+M+ K  GD+  A + F+ M  +N VTW  MI    Q GY  EA+ L+ DMI S
Sbjct: 206 VGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFS 265

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV---------------------- 638
           G +PD  T   +++AC++  L+ +G ++ +S  + HG+                      
Sbjct: 266 GYEPDRFTLSGVISACANMELLLLGQQL-HSQAIRHGLTLDRCVGCCLINMYAKCSVDGS 324

Query: 639 --------EPILDH----YTCMIDCLGRAGHFHEAEM-------LIDEMPCKDDPVIWEV 679
                   + ILDH    +T MI    + G + E  +       L   +P   +   +  
Sbjct: 325 MCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIP---NHFTFSS 381

Query: 680 LLSSCRLHANVRLAKRAAEELFRL--DPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
            L +C   A +R+ ++      +L     N    SL++ +Y+  GR DD R   +++ E 
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS-MYARSGRIDDARKAFDILFEK 440

Query: 738 CIV 740
            ++
Sbjct: 441 NLI 443


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Glycine max]
          Length = 1033

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 240/749 (32%), Positives = 389/749 (51%), Gaps = 64/749 (8%)

Query: 45  LFDKMPH-KDIYSWNAILS--AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLE 101
           L  K P+  D+   N ++S  + C S  ++ A ++F+E+  +   SWN++IS   R G  
Sbjct: 167 LISKSPYASDMVLSNVLMSMYSHC-SASIDDARRVFEEIKMKTSASWNSIISVYCRRGDA 225

Query: 102 EKALSVYNKMSNEGF----VPTHITLASVFKASTALLD--VEHGRRCHGLVIKIGLDKNI 155
             A  +++ M  E       P   T  S+   + +L+D  +    +    + K    K++
Sbjct: 226 ISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDL 285

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
           YV +AL+S +A+ G    A  +FE+M + N VT   +M GLA+  +  EA ++F+ M + 
Sbjct: 286 YVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KD 344

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHL 274
            V I++ S + +L              F +  N       GQ+VH   I+    +  + +
Sbjct: 345 LVEINASSYAVLL------------SAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILI 392

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
            N+L+++YAK   +D+A  IF  +P +  VSWN +I+G     +  +A+     M+  G 
Sbjct: 393 GNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGM 452

Query: 335 EPDEVTSINMLVACVRSGDIKTGREM---------------------------------- 360
            P + + I+ L +C   G I  G+++                                  
Sbjct: 453 VPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQK 512

Query: 361 -FDSMPSPSVSSWNAMLSSYSQSENHK-EAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            F  MP     SWN+ + + + SE    +AIK F EM   G KP+R T   ILS+ +++ 
Sbjct: 513 VFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLS 572

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMI 477
           +LE G+Q+HA  LK +   DN + + L+  Y KC++ E  E +F R+ E  D V WN+MI
Sbjct: 573 LLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMI 632

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
           +G   N +  +A      M Q       F+ ATVLS+CA +++  +G +VHA   +    
Sbjct: 633 SGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLE 692

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
            ++ VGSAL++MY KCG I  A +FF++M  +N  +WN MI GYA++G+G +A++L+  M
Sbjct: 693 AEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQM 752

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
              G  PD +TFV +L+ACSH GLVD G E F SM   + + P ++H++CM+D LGRAG 
Sbjct: 753 KQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGD 812

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSS-CRLHA-NVRLAKRAAEELFRLDPKNSAPYSLLA 715
             + E  I  MP   + +IW  +L + CR ++ N  L +RAA+ L  L+P N+  Y LL+
Sbjct: 813 VKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLS 872

Query: 716 NIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           N++++ G+W+D+   R L   N  VK  A
Sbjct: 873 NMHAAGGKWEDVEEAR-LAMRNAEVKKEA 900



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 181/713 (25%), Positives = 332/713 (46%), Gaps = 98/713 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH  I + GL  D F CN L+ ++ +  N  SAQ                          
Sbjct: 61  LHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQ-------------------------- 94

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                KLFDEMP++N+VSW+ L+S   +NG+ ++A  ++  + + G +P H  + S  +A
Sbjct: 95  -----KLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRA 149

Query: 130 STALLD--VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT-KHAVPVFEEMSEPNE 186
              L    ++ G   HGL+ K     ++ ++N L+S+Y+ C  +   A  VFEE+     
Sbjct: 150 CQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTS 209

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI----DSVSLSSVLGV-CAREGCGVESD 241
            ++ +++S   +    + A ++F  M R+A  +    +  +  S++ V C+   CG+   
Sbjct: 210 ASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGL--- 266

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                          +Q+     K  F  DL++ ++L+  +A+ G +DSA++IF  + +R
Sbjct: 267 ------------TLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDR 314

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG---- 357
           + V+ N ++ G  +++Q  +A ++ + MK    E +  +   +L A     ++K G    
Sbjct: 315 NAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAVLLSAFTEFSNLKEGKRKG 373

Query: 358 ------------------------------------REMFDSMPSPSVSSWNAMLSSYSQ 381
                                               R +F  MPS    SWN+++S    
Sbjct: 374 QEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDH 433

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +E  +EA+  F  M+  G+ P + ++   LSSCA++G +  G+Q+H   +K    +D  V
Sbjct: 434 NERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSV 493

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI-EAFMFFKQMRQNE 500
           ++ L+ +Y++    E  ++VF  +PE D V WNS I  L+ +   + +A  +F +M Q  
Sbjct: 494 SNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAG 553

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
             P + +F  +LS+ + LS    GRQ+HA I K    +D  + + L+  Y KC  +    
Sbjct: 554 WKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCE 613

Query: 561 QFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
             F  M   ++ V+WN MI GY  NG   +A+ L   M+  G + DD T   +L+AC+  
Sbjct: 614 IIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASV 673

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
             ++ G+E+ ++  +   +E  +   + ++D   + G    A    + MP ++
Sbjct: 674 ATLERGMEV-HACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRN 725



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 286/596 (47%), Gaps = 66/596 (11%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           VE   + H  + K GL  +++  N L++++ + G    A  +F+EM + N V+++ ++SG
Sbjct: 55  VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSG 114

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
            A+     EA  +FR +I   +  +  ++ S L  C   G  +                 
Sbjct: 115 YAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLK--------------L 160

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAK-NGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           G ++H L  K  + +D+ LSN L+ MY+  +  +D A  +F  +  ++  SWN +I+ Y 
Sbjct: 161 GMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYC 220

Query: 315 QKYQSTKAIELLQRMKSCGFE----PDEVTSINML-VAC--------------------- 348
           ++  +  A +L   M+    E    P+E T  +++ VAC                     
Sbjct: 221 RRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSS 280

Query: 349 ---------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                           R G I + + +F+ M   +  + N ++   ++    +EA K+F+
Sbjct: 281 FVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFK 340

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGK----QVHAASLKTASHIDNYVASG--LIG 447
           EM+   V+ + ++ A++LS+      L+ GK    +VHA  ++ A  +D ++  G  L+ 
Sbjct: 341 EMK-DLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNAL-VDVWILIGNALVN 398

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+KC   + A  +F  +P  D V WNS+I+GL  N    EA   F  MR+N M P++FS
Sbjct: 399 LYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFS 458

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
             + LSSCA L     G+Q+H +  K G   D+ V +AL+ +Y +   +   ++ F +M 
Sbjct: 459 VISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMP 518

Query: 568 GKNTVTWNEMIHGYAQNGYGD-EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             + V+WN  I   A +     +A++ + +M+ +G KP+ +TF+ IL+A S   L+++G 
Sbjct: 519 EYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGR 578

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           +I +++ L H V         ++   G+     + E++   M  + D V W  ++S
Sbjct: 579 QI-HALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMIS 633



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 214/461 (46%), Gaps = 85/461 (18%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLC-NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           K+    G+ +HA+++RN L D   L  N L+ LY+KCN   +A+ +F  MP KD  SWN+
Sbjct: 367 KEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNS 426

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           I                               IS L  N   E+A++ ++ M   G VP+
Sbjct: 427 I-------------------------------ISGLDHNERFEEAVACFHTMRRNGMVPS 455

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             ++ S   +  +L  +  G++ HG  IK GLD ++ V+NALL+LYA+    +    VF 
Sbjct: 456 KFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFF 515

Query: 180 EMSEPNEVTFTAMMSGLAKTD-RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            M E ++V++ + +  LA ++  V++A++ F  M++     + V+  ++           
Sbjct: 516 LMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINI----------- 564

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                  + +  S    G+Q+H L +K     D  + N+LL  Y K   M+  E+IFS +
Sbjct: 565 -----LSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRM 619

Query: 299 PE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
            E R  VSWN MI+GY       KA+ L+  M   G   D+ T   +L AC     ++ G
Sbjct: 620 SERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERG 679

Query: 358 REM-----------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
            E+                                   F+ MP  ++ SWN+M+S Y++ 
Sbjct: 680 MEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARH 739

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            +  +A+KLF +M+  G  PD  T   +LS+C+ +G+++ G
Sbjct: 740 GHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEG 780


>gi|357484403|ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513824|gb|AES95447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 955

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 228/786 (29%), Positives = 383/786 (48%), Gaps = 98/786 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H   +++G+  D  LCN LI +Y+KC + +S+                    ++C 
Sbjct: 217 GRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSD-------------------SEC- 256

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    LF+EM  ++VVSWN+++   + NG  EK+L  + +M+       H++L+  
Sbjct: 257 ---------LFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCA 307

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKN--IYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
             A ++L ++  G   HG  IK+G   N  + VAN+L+SLY++C     A  VF EM+  
Sbjct: 308 ISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYK 367

Query: 185 NEVTFTAMMSGLAKTDRVVEALE-MFRLMIRKAVSIDSVSLSSVLGVCA-----REGCGV 238
           + V++ AMM G A  + + EA + M  +        D V+L+++L +CA     REG   
Sbjct: 368 DIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREG--- 424

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                        R +HG  +     +      L L N L+DMY+K   ++ AE++F + 
Sbjct: 425 -------------RTIHGYAIR----RHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHST 467

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------- 348
            +  +VSWN MI+GY Q     KA  L + +  CG      T   +L +C          
Sbjct: 468 AQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGK 527

Query: 349 -------------------------VRSGDIKTGREMFDSMPS-PSVSSWNAMLSSYSQS 382
                                    + SGD+ +G  +     S   ++SWN ++    + 
Sbjct: 528 SVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRG 587

Query: 383 ENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +  +EA++ F  M Q      D  TL  +LS+ A + +L  GK +H+ +LK+    D  V
Sbjct: 588 DQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRV 647

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + LI +Y +C+    A +VF      ++  WN MI+ LS N    EA   F+ +   + 
Sbjct: 648 QNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHL---QF 704

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P +F+  +VLS+C ++     G+QVH    + GY  + F+ +AL+++Y  CG +  A +
Sbjct: 705 KPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVK 764

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F     K+   WN MI  Y  +G G++A+ L+ +M   G+K    TFV++L+ACSHSGL
Sbjct: 765 VFRHSQ-KSESAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGL 823

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           V+ G++ +  M   +G++P  +H   +++ L R+G   EA      +       +W +LL
Sbjct: 824 VNQGLQYYECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQSNASSGVWGMLL 883

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           S C  H  + L K+ AE+LF ++P+N   Y  LAN+Y + G W D   +R+ + +  + K
Sbjct: 884 SVCNYHGELELGKKVAEKLFEMEPQNVGYYISLANMYVAAGSWKDATDLRQYIHDQGLRK 943

Query: 742 DPAYSL 747
              YSL
Sbjct: 944 CAGYSL 949



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 185/675 (27%), Positives = 295/675 (43%), Gaps = 111/675 (16%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
              ++H   L+ G          L  LYSK  +  S++ LF+ + ++D+ +WNAI     
Sbjct: 115 TATVVHCAALKTGALAYLPTSTSLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAI----- 169

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                     ISA + N     A+  + KM  +       TL  
Sbjct: 170 --------------------------ISASLENKCYRTAVEFFQKMIKDQTRFDSTTLLL 203

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG--WTKHAVPVFEEMSE 183
           V    + L +   GR  H + IK G+  +I + NAL+++YAKCG   +  +  +FEEM  
Sbjct: 204 VVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSECLFEEMEY 263

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + V++ ++M G      + ++L  FR M       D VSLS  +  C+  G        
Sbjct: 264 KDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLG-------- 315

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEAD--LHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
              +  F   +HGQ      IKLG++ +  + ++NSL+ +Y++   +D AE +F  +  +
Sbjct: 316 ---ELAFGECIHGQ-----GIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYK 367

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGRE- 359
            +VSWN M+ GY       +A +L+  M++ G F+PD VT   ML  C      + GR  
Sbjct: 368 DIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTI 427

Query: 360 -----------------------------------MFDSMPSPSVSSWNAMLSSYSQSEN 384
                                              +F S     + SWNAM+S YSQ++ 
Sbjct: 428 HGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKY 487

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA---------S 435
           +++A  LF+E+   G     +T+  ILSSC +   L  GK VH   LK+          S
Sbjct: 488 YEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNS 547

Query: 436 HIDNYVASG-LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
            +  Y+ SG L   +S  Q N             DI  WN++I G        EA   F 
Sbjct: 548 LMQMYINSGDLTSGFSILQENS---------SIADIASWNTIIVGCVRGDQFQEALETFM 598

Query: 495 QMRQNEMYP-TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
            MRQ   +     +   VLS+ A +    QG+ +H+   K  + +D  V ++LI MY +C
Sbjct: 599 LMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRC 658

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
            DI  AR+ F      N  TWN MI   + N    EA+ L++ +     KP++ T V++L
Sbjct: 659 RDINSARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHL---QFKPNEFTIVSVL 715

Query: 614 TACSHSGLVDVGVEI 628
           +AC+  G++  G ++
Sbjct: 716 SACTRIGVLIHGKQV 730



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 186/753 (24%), Positives = 319/753 (42%), Gaps = 140/753 (18%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSN 113
           +++LS  C+      A  LFD+MP+RN     V + +L+   ++  LE+           
Sbjct: 65  SSLLSCSCRC--FCIAINLFDKMPQRNFHVREVHF-DLVVDCIKLSLEK----------- 110

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
                      ++F A+            H   +K G    +  + +L +LY+K G    
Sbjct: 111 ----------PNIFTATVV----------HCAALKTGALAYLPTSTSLFTLYSKAGDFTS 150

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           +  +FE +   + + + A++S   +      A+E F+ MI+     DS +L  V+   + 
Sbjct: 151 SRVLFEHIHNRDVIAWNAIISASLENKCYRTAVEFFQKMIKDQTRFDSTTLLLVVSTLS- 209

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS--A 291
                    F Q          G+ +HC++IK G   D+ L N+L++MYAK GD++S  +
Sbjct: 210 -----HLKNFGQ----------GRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDS 254

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
           E +F  +  + VVSWN ++ G        K++   +RM       D V+    + AC   
Sbjct: 255 ECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSL 314

Query: 352 GDIKTG-------------------------------------REMFDSMPSPSVSSWNA 374
           G++  G                                       +F  M    + SWNA
Sbjct: 315 GELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNA 374

Query: 375 MLSSYSQSENHKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           M+  Y+ +EN  EA  L  EMQ  G  +PD  TL  +L  CA + +   G+ +H  +++ 
Sbjct: 375 MMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRR 434

Query: 434 ASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
               D+  + +GLI +YSKC   E AE +FH   ++D+V WN+MI+G S N    +A   
Sbjct: 435 HMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNL 494

Query: 493 FKQMR---QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
           FK++    QN    T F+   +LSSC   +S   G+ VH    K G++N   + ++L++M
Sbjct: 495 FKELLCCGQNCSSSTVFA---ILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQM 551

Query: 550 YCKCGDIYGARQFFDMMHGKNTV----TWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKP 604
           Y   GD+      F ++   +++    +WN +I G  +     EA+  +  M        
Sbjct: 552 YINSGDLTSG---FSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNY 608

Query: 605 DDITFVAILTACSHSGLVDVGVEI--------FNS-MQLDHGVEPILDH----------- 644
           D IT V +L+A ++  L++ G  +        F S  ++ + +  + D            
Sbjct: 609 DSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVF 668

Query: 645 ----------YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
                     + CMI  L       EA  L   +  K +      +LS+C     +   K
Sbjct: 669 KFHSISNLCTWNCMISALSHNKESREALELFRHLQFKPNEFTIVSVLSACTRIGVLIHGK 728

Query: 695 RAAEELFRLD-PKNSAPYSLLANIYSSLGRWDD 726
           +     FR    +NS   + L ++YS+ GR D+
Sbjct: 729 QVHGYTFRYGYQQNSFISAALVDLYSTCGRLDN 761



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 5/111 (4%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GK +H +  R G   ++F+   L++LYS C    +A  +F +   K   +WN++++A 
Sbjct: 725 IHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVF-RHSQKSESAWNSMIAAY 783

Query: 65  CKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
               + E A +LF EM +  +     ++ +L+SA   +GL  + L  Y  M
Sbjct: 784 GNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYECM 834


>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 203/650 (31%), Positives = 338/650 (52%), Gaps = 55/650 (8%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           +++  R+ HG++   GL  +I +A  L+SLY   G+TK A  VF+++ EP+   +  ++ 
Sbjct: 68  NIDSLRQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILR 127

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
                +   E ++ + L+++     D +  S  L  C               DN      
Sbjct: 128 CYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTE---------VQDLDN------ 172

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+++HC  +K+    ++ L+  LLDMYAK G++ S+  +F ++  R+VV W  MIAGY 
Sbjct: 173 -GKKIHCQIVKVPSFDNVVLTG-LLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYV 230

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------------------- 348
           +     + + L  RM+      +E T   +++AC                          
Sbjct: 231 KNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSC 290

Query: 349 ---------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                    V+ GDI   R +F+      +  W AM+  Y+ + +  EA+ LF++M   G
Sbjct: 291 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVG 350

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           +KP+  T+A +LS C  +G LE G+ +H  S+K     D  VA+ L+ +Y+KC +N  A+
Sbjct: 351 IKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAK 409

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            VF    E DIV WNS+I+G S N    EA   F +M    + P   + A++ S+CA L 
Sbjct: 410 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLG 469

Query: 520 SSFQGRQVHAQIEKDGYV--NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           S   G  +HA   K G++  + + VG+AL++ Y KCGD   AR  FD +  KNT+TW+ M
Sbjct: 470 SLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAM 529

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I GY + G    ++ L+++M+    KP++ TF ++L+ACSH+G+V+ G + F+SM  D+ 
Sbjct: 530 IGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYN 589

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
             P   HYTCM+D L RAG   +A  +I++MP + D   +   L  C +H+   L +   
Sbjct: 590 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 649

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           +++  L P +++ Y L++N+Y+S GRW   + VR LM +  + K   +S+
Sbjct: 650 KKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGHSI 699



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 158/643 (24%), Positives = 283/643 (44%), Gaps = 90/643 (13%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           H  +  NGL  D  +  +L+ LY     T  A+ +FD++P  D Y W  IL   C +++ 
Sbjct: 76  HGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNE- 134

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
                                           + +  Y+ +   GF    I  +   KA 
Sbjct: 135 ------------------------------SFEVIKFYDLLMKHGFGYDDIVFSKALKAC 164

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
           T + D+++G++ H  ++K+    N+ V   LL +YAKCG  K +  VFE+++  N V +T
Sbjct: 165 TEVQDLDNGKKIHCQIVKVPSFDNV-VLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWT 223

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           +M++G  K D   E L +F  M   +V  +  +  +++  C +                 
Sbjct: 224 SMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTK----------------- 266

Query: 251 SRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
            R +H G+  H   IK G E    L  SLLDMY K GD+ +A  +F+      +V W  M
Sbjct: 267 LRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAM 326

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------- 360
           I GY       +A+ L Q+M   G +P+ VT  ++L  C   G+++ GR +         
Sbjct: 327 IVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGI 386

Query: 361 -------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                                    F+      + +WN+++S +SQ+ +  EA+ LF  M
Sbjct: 387 WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 446

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA--SHIDNYVASGLIGIYSKCQ 453
               V P+  T+A + S+CA++G L  G  +HA S+K    +    +V + L+  Y+KC 
Sbjct: 447 NTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 506

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
             E A  +F  I E + + W++MI G         +   F++M + +  P + +F +VLS
Sbjct: 507 DAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLS 566

Query: 514 SCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           +C+      +G++  + + KD  +       + +++M  + G++  A    + M  +  V
Sbjct: 567 ACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV 626

Query: 573 -TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
             +   +HG   +   D    + K M+   + PDD ++  +++
Sbjct: 627 RCFGAFLHGCGMHSRFDLGEIVIKKML--DLHPDDASYYVLVS 667



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 250/511 (48%), Gaps = 68/511 (13%)

Query: 48  KMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSV 107
           K+P  D      +L    K  +++ +YK+F+++  RNVV W ++I+  V+N L E+ L +
Sbjct: 182 KVPSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVL 241

Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
           +N+M     +    T  ++  A T L  +  G+  HG +IK G++ +  +  +LL +Y K
Sbjct: 242 FNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVK 301

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
           CG   +A  VF E S  + V +TAM+ G      V EAL +F+ M    +  + V+++SV
Sbjct: 302 CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASV 361

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           L      GCG+  ++      +  R++HG     L+IK+G   D +++N+L+ MYAK   
Sbjct: 362 L-----SGCGLVGNL------ELGRSIHG-----LSIKVGI-WDTNVANALVHMYAKCYQ 404

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
              A+ +F    E+ +V+WN +I+G+ Q     +A+ L  RM +    P+ VT  ++  A
Sbjct: 405 NRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSA 464

Query: 348 C-------------------------------------VRSGDIKTGREMFDSMPSPSVS 370
           C                                      + GD ++ R +FD++   +  
Sbjct: 465 CASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTI 524

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           +W+AM+  Y +  + K +++LF EM  +  KP+ +T   +LS+C+  G++  GK+  ++ 
Sbjct: 525 TWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSM 584

Query: 431 LKTASHIDNYVASG-----LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS 484
            K      N+  S      ++ + ++    E A  +  ++P + D+ C+ + + G  ++S
Sbjct: 585 YKDY----NFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHS 640

Query: 485 -LDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
             D+   +  K +   +++P   S+  ++S+
Sbjct: 641 RFDLGEIVIKKML---DLHPDDASYYVLVSN 668



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 211/428 (49%), Gaps = 60/428 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  H  ++++G+   + L   L+++Y KC +  +A+ +F++  H D+  W A       
Sbjct: 273 GKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTA------- 325

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I     NG   +ALS++ KMS  G  P  +T+ASV
Sbjct: 326 ------------------------MIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASV 361

Query: 127 FKASTALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                 + ++E GR  HGL IK+G+ D N  VANAL+ +YAKC   + A  VFE  SE +
Sbjct: 362 LSGCGLVGNLELGRSIHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKD 419

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V + +++SG ++   + EAL +F  M  ++V  + V+++S+   CA  G          
Sbjct: 420 IVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLG---------- 469

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEA--DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                     G  +H  ++KLGF A   +H+  +LLD YAK GD +SA +IF  + E++ 
Sbjct: 470 ------SLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNT 523

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           ++W+ MI GYG++  +  ++EL + M     +P+E T  ++L AC  +G +  G++ F S
Sbjct: 524 ITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSS 583

Query: 364 MP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           M      +PS   +  M+   +++   ++A+ +  +M    ++PD       L  C    
Sbjct: 584 MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP---IQPDVRCFGAFLHGCGMHS 640

Query: 419 ILESGKQV 426
             + G+ V
Sbjct: 641 RFDLGEIV 648


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 222/777 (28%), Positives = 379/777 (48%), Gaps = 81/777 (10%)

Query: 7   GKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK +H+ I+  G F  D ++   LI  Y KC +  +A  +FDK+P               
Sbjct: 68  GKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPES------------- 114

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                        E+  ++V  WN++++   R G +++ ++ + +M   G  P   +L  
Sbjct: 115 -------------EVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCI 161

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP- 184
           +  AS   L   + ++ HG  ++     + ++ + L+ +Y  CG    A  +F+E+ +  
Sbjct: 162 LLGASDGHLG--YAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKG 219

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V +  M+ G  +      +LE++ L   + V + S S +S L  C    C  E   F 
Sbjct: 220 NVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSAC----CQGEFVSF- 274

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G QVHC  +KLGFE D ++  SLL MY+K   ++ AE +F  +  +   
Sbjct: 275 -----------GMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTE 323

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------ 358
            WN MI+ Y    +S   +++ ++MK     PD +T+ N+L +C   G    GR      
Sbjct: 324 LWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAEL 383

Query: 359 -----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                         +F+++    V +W +M+S + Q+  + EA+
Sbjct: 384 VKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEAL 443

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           + +  M   G KPD   +A ++S+C  +  +  G  +H  ++K+    D +VAS L+ +Y
Sbjct: 444 EFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMY 503

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           SK    +++  VF  +P  ++V WNS+I+    N L   +   F QM Q  ++P   S  
Sbjct: 504 SKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSIT 563

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           +VL S + ++   +G+ VH  + +    +D+ + +ALI+MY KCG +  A+  F  M   
Sbjct: 564 SVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQT 623

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           N VTWN MI G   +G   +A+ L+ +M + G+ PDDITF+++LT+C+H G ++ G+++F
Sbjct: 624 NLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLF 683

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
             M ++HG+EP ++HY  ++D LGRAG   +A   +  +P + D  IW  LL SCR+H N
Sbjct: 684 QLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHN 743

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           V L K AA +L  ++P   + Y  L N+Y      D    +R  M E  + K P  S
Sbjct: 744 VELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCS 800



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 171/669 (25%), Positives = 299/669 (44%), Gaps = 67/669 (10%)

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           I  LV+ G    AL  Y   S      T  T  S+ KA   L ++++G+  H  +I  G 
Sbjct: 24  IVTLVQQGQYVDALQFY---SRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGF 80

Query: 152 -DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP----NEVTF-TAMMSGLAKTDRVVEA 205
              + Y+  +L++ Y KCG   +AV VF+++ E      +VTF  ++++G  +     E 
Sbjct: 81  FYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEG 140

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           +  F  M    V  D+ SL  +LG                SD       + +Q+H  +++
Sbjct: 141 IAQFCRMQLFGVRPDAYSLCILLGA---------------SDGHLG---YAKQIHGYSVR 182

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER-SVVSWNVMIAGYGQK--YQSTKA 322
             F  D  L + L+ MY   G    A  +F  L ++ +VV+WNVMI G+G+   ++++  
Sbjct: 183 KVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLE 242

Query: 323 IELLQR--------------MKSC-------------------GFEPDEVTSINMLVACV 349
           + LL +              + +C                   GFE D     ++L    
Sbjct: 243 VYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYS 302

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           +   ++    +FD +       WNAM+S+Y  +    + +K++++M+   + PD  T   
Sbjct: 303 KCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATN 362

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +LSSC  +G  + G+ +HA  +K     +  + S L+ +YSKC  ++ A  +F+ I   D
Sbjct: 363 VLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRD 422

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W SMI+G   N   +EA  F+  M      P     A+V+S+C  L +   G  +H 
Sbjct: 423 VVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHG 482

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
              K G   D+FV S+L++MY K      +   F  M  KN V WN +I  Y +NG  D 
Sbjct: 483 LAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDL 542

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           ++ L+  M   G+ PD ++  ++L + S   ++  G  +   + +   +   L     +I
Sbjct: 543 SISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYL-IRQRIPSDLQLENALI 601

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL--FRLDPKN 707
           D   + G    A+ +   M  + + V W ++++ C  H +   A    +E+  F + P +
Sbjct: 602 DMYIKCGFLKYAQHIFQNM-LQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDD 660

Query: 708 SAPYSLLAN 716
               SLL +
Sbjct: 661 ITFISLLTS 669


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 215/699 (30%), Positives = 362/699 (51%), Gaps = 55/699 (7%)

Query: 86  VSWNNLISALVRNGLEEKALSVYN-KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
           +S N+ I+ + +     +AL  +N  + N        T  ++  A T +  +++G+R H 
Sbjct: 45  LSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHD 104

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
            ++K     ++ + N +L++Y KCG  K A   F+ M   + V++T M+SG ++  +  +
Sbjct: 105 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQEND 164

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           A+ M+  M+R     D ++  S++  C   G   + D+             G Q+H   I
Sbjct: 165 AIIMYIQMLRSGYFPDQLTFGSIIKACCIAG---DIDL-------------GGQLHGHVI 208

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           K G++  L   N+L+ MY K G +  A  +F+ +  + ++SW  MI G+ Q     +A+ 
Sbjct: 209 KSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALY 268

Query: 325 LLQRMKSCG-FEPDEVTSINMLVAC----------------------------------- 348
           L + M   G ++P+E    ++  AC                                   
Sbjct: 269 LFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMY 328

Query: 349 VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
            + G + + +  F  + SP + SWNA++++ + S+ + EAI  F +M   G+ PD  T  
Sbjct: 329 AKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDVN-EAIYFFCQMIHMGLMPDDITFL 387

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE- 467
            +L +C +   L  G Q+H+  +K        V + L+ +Y+KC     A  VF  I E 
Sbjct: 388 NLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISEN 447

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            ++V WN++++  S +    EAF  FK M  +E  P   +  T+L +CA+L S   G QV
Sbjct: 448 GNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQV 507

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H    K G V D+ V + LI+MY KCG +  AR  FD     + V+W+ +I GYAQ G G
Sbjct: 508 HCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLG 567

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
            EA+ L++ M   GV+P+++T++ +L+ACSH GLV+ G  ++N+M+++ G+ P  +H +C
Sbjct: 568 QEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSC 627

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
           M+D L RAG  +EAE  I +     D  +W+ LL+SC+ H NV +A+RAAE + +LDP N
Sbjct: 628 MVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSN 687

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           SA   LL+NI++S G W ++  +R LM +  + K P  S
Sbjct: 688 SAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQS 726



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 181/631 (28%), Positives = 287/631 (45%), Gaps = 87/631 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H HIL++    D  L N ++ +Y KC +                            
Sbjct: 99  GKRIHDHILKSNCQPDLVLQNHILNMYGKCGS---------------------------- 130

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A K FD M  R+VVSW  +IS   +NG E  A+ +Y +M   G+ P  +T  S+
Sbjct: 131 ---LKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSI 187

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA     D++ G + HG VIK G D ++   NAL+S+Y K G   HA  VF  +S  + 
Sbjct: 188 IKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDL 247

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +++ +M++G  +    +EAL +FR M R+ V   +     SV   C              
Sbjct: 248 ISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSAC-------------- 293

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                 +   G+Q+  +  K G   ++    SL DMYAK G + SA+  F  +    +VS
Sbjct: 294 --RSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVS 351

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGDI 354
           WN +IA         +AI    +M   G  PD++T +N+L AC           + S  I
Sbjct: 352 WNAIIAALANS-DVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYII 410

Query: 355 KTGRE-----------MF--------------DSMPSPSVSSWNAMLSSYSQSENHKEAI 389
           K G +           M+              D   + ++ SWNA+LS+ SQ +   EA 
Sbjct: 411 KMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAF 470

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +LF+ M F   KPD  T+  IL +CA +  LE G QVH  S+K+   +D  V++ LI +Y
Sbjct: 471 RLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMY 530

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC   + A  VF      DIV W+S+I G +   L  EA   F+ MR   + P + ++ 
Sbjct: 531 AKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYL 590

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
            VLS+C+ +    +G  ++  +E + G        S ++++  + G +Y A  F      
Sbjct: 591 GVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGF 650

Query: 569 KNTVT-WNEMIHGYAQNGYGDEAVRLYKDMI 598
              +T W  ++     +G  D A R  ++++
Sbjct: 651 DPDITMWKTLLASCKTHGNVDIAERAAENIL 681


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 214/667 (32%), Positives = 336/667 (50%), Gaps = 117/667 (17%)

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
           ++K+GL  ++Y+ N L++LYAK G+   A  +F EM      ++  ++SG AK  ++ +A
Sbjct: 1   MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60

Query: 206 LEMFRLM-IRKAVSIDSV------------------------------SLSSVLGVCARE 234
            ++F L+ +R +VS  ++                              +L++VL  CA  
Sbjct: 61  HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
           G               SR + G++VH   +KLG  A + ++NSLL+MYAK GD+  A+V+
Sbjct: 121 G---------------SRGI-GKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  +  R+  SWN MI                              S++M       G +
Sbjct: 165 FDRMKLRNTSSWNAMI------------------------------SLHM-----NCGRV 189

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE-MQFRGVKPDRTTLAIILSS 413
                 F+ +    + SWN+M++  +Q     EA++ F   ++   +KPDR +LA  LS+
Sbjct: 190 DLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSA 249

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV------------ 461
           CA +  L  GKQ+H   ++T       V + LI +Y+K    E+A R+            
Sbjct: 250 CANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVI 309

Query: 462 ---------------------FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
                                F+ + + D+V W +MI G   N L+ +A   FK M    
Sbjct: 310 AFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEG 369

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
             P  F+ A +LS+ + ++S   G+Q+HA   + G      VG+AL  MY K G I GAR
Sbjct: 370 PRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGAR 429

Query: 561 QFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           + F+++   ++TV+W  MI   AQ+G G+EA+ L++ M+  G+KPD IT+V +L+AC+H 
Sbjct: 430 KVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHG 489

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           GLV+ G   F+ M+  H ++P L HY CM+D  GRAG   EA   ++ MP + D + W  
Sbjct: 490 GLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGS 549

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LLSSC+++ NV LAK AAE L  ++P NS  YS LAN+YSS G+WDD   +R+LM    +
Sbjct: 550 LLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGV 609

Query: 740 VKDPAYS 746
            K+   S
Sbjct: 610 KKEQGLS 616



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 256/557 (45%), Gaps = 97/557 (17%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           +++ GL    +L N L+ LY+K      A  LF++MP K  +SWN ILS   K   LE A
Sbjct: 1   MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
           +++FD +P R+ VSW  +I    + G  E A+ ++  M  +  +PT  TL +V  +  A 
Sbjct: 61  HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
                G++ H  V+K+GL   + VAN+LL++YAK G  K A  VF+ M   N  ++ AM+
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS------- 246
           S      RV  AL  F L+  +    D VS +S++  C + G   E+  F  S       
Sbjct: 181 SLHMNCGRVDLALAQFELLSER----DIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSL 236

Query: 247 -DNKFS------------RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN-------- 285
             ++FS            +   G+Q+H   ++  F+A   + N+L+ MYAK+        
Sbjct: 237 KPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARR 296

Query: 286 -------------------------GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
                                    GD+  A  IF++L +  VV+W  MI GY Q   + 
Sbjct: 297 IIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNN 356

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVA----------------CVRSGD----------- 353
            AIE+ + M S G  P+  T   ML A                 +RSG+           
Sbjct: 357 DAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALT 416

Query: 354 --------IKTGREMFDSM-PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
                   I   R++F+ +  +    SW +M+ + +Q    +EAI+LF +M   G+KPD 
Sbjct: 417 TMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDH 476

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQRNELAERVF 462
            T   +LS+C   G++E G+  +   +K    ID  ++  + ++ ++ +    + A +  
Sbjct: 477 ITYVGVLSACTHGGLVEQGRS-YFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFV 535

Query: 463 HRIP-ELDIVCWNSMIA 478
             +P E D++ W S+++
Sbjct: 536 ENMPMEPDVIAWGSLLS 552



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 241/480 (50%), Gaps = 30/480 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H+ +++ GL     + N L+ +Y+K  +   A+ +FD+M  ++  SWNA++S    
Sbjct: 126 GKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMN 185

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK-MSNEGFVPTHITLAS 125
              ++ A   F+ + ER++VSWN++I+   ++G + +AL  ++  + +    P   +LAS
Sbjct: 186 CGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLAS 245

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE--MSE 183
              A   L  +  G++ HG +++   D +  V NAL+S+YAK G  + A  + E+  +S+
Sbjct: 246 ALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISD 305

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLM---------------IRKAVSIDSVSL-SSV 227
            + + FTA+++G  K   +  A ++F  +               ++  ++ D++ +  ++
Sbjct: 306 LDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTM 365

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           +    R      + + + S +  S N HG+Q+H   I+ G      + N+L  MYAK G 
Sbjct: 366 VSEGPRPNSFTLAAMLSASSSVTSLN-HGKQIHASAIRSGEALSPSVGNALTTMYAKAGS 424

Query: 288 MDSAEVIFSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
           ++ A  +F+ L + R  VSW  MI    Q     +AIEL ++M + G +PD +T + +L 
Sbjct: 425 INGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLS 484

Query: 347 ACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           AC   G ++ GR  FD M +     P++S +  M+  + ++   +EA K    M    ++
Sbjct: 485 ACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMP---ME 541

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           PD      +LSSC     ++  K V A  L      ++   S L  +YS C + + A ++
Sbjct: 542 PDVIAWGSLLSSCKVYKNVDLAK-VAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKI 600


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 202/667 (30%), Positives = 338/667 (50%), Gaps = 51/667 (7%)

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G  P   T   V K  T L +V  G+    +++++G D +++VA++L+ LYA  G  + A
Sbjct: 5   GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
              F++M + + V +  M++G  +      A+++F+ M+      DSV+ + VL +   E
Sbjct: 65  RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
              VE               +G+Q+H L ++ G +    + N+L+ +Y+K   +  A  +
Sbjct: 125 AM-VE---------------YGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKL 168

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  +P+  +V WN MI GY Q      A  L   M S G +PD +T  + L +   S  +
Sbjct: 169 FDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSL 228

Query: 355 KTGRE-----------------------------------MFDSMPSPSVSSWNAMLSSY 379
           K  +E                                   MF+      +  + AM+S Y
Sbjct: 229 KQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGY 288

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
             +  +K+A+++FR +  + + P+  T + IL +CA +  ++ G+++H   +K       
Sbjct: 289 VLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKC 348

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            V S ++ +Y+KC R +LA  +F RI   D +CWNS+I   S +    EA   F+QM   
Sbjct: 349 PVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGME 408

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
            +     + +  LS+CA + +   G+++H  + K  + +D+F  SALI MY KCG +  A
Sbjct: 409 GVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIA 468

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           R  F++M  KN V WN +I  Y  +GY  +++ L+ +M+  G++PD ITF+ IL++C H+
Sbjct: 469 RLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHA 528

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           G V+ GV  F  M  ++G+   ++HY CM D  GRAGH  EA  +I  MP      +W  
Sbjct: 529 GQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGT 588

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL +CR+H NV LA+ A+  L  L+PKNS  Y LL ++ +  G+W  +  ++ LM E  +
Sbjct: 589 LLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGV 648

Query: 740 VKDPAYS 746
            K P  S
Sbjct: 649 QKVPGCS 655



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 153/591 (25%), Positives = 270/591 (45%), Gaps = 63/591 (10%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK----DIYSWNAILSAQCKSDD 69
           +L  G+F D +    +I+  +  NN    + + D +       D++  ++++     +  
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           +E A + FD+M +++ V WN +I+  V+ G  + A+ ++  M +    P  +T A V   
Sbjct: 61  IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
           S +   VE+GR+ HGLV++ GLD    V N L+++Y+K      A  +F+ M + + V +
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             M+ G  +   + +A  +F  MI   +  DS++ +S L   A      ES    Q    
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLA------ESSSLKQI--- 231

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                  +++H   ++ G   D++L+++L+D+Y K  D   A  +F+   +  +V +  M
Sbjct: 232 -------KEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAM 284

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------- 360
           I+GY     +  A+E+ + +      P+ +T  ++L AC     IK GRE+         
Sbjct: 285 ISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNEL 344

Query: 361 --------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                     F  +       WN++++S+SQ    +EAI LFR+
Sbjct: 345 EEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQ 404

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M   GVK D  T++  LS+CA +  L  GK++H   +K A   D +  S LI +Y+KC +
Sbjct: 405 MGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGK 464

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
             +A  VF+ + E + V WNS+IA    +    ++   F  M +  + P   +F T+LSS
Sbjct: 465 LNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSS 524

Query: 515 CAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           C        G R      E+ G         A +E Y    D++G     D
Sbjct: 525 CGHAGQVEDGVRYFRCMTEEYGI-------PAQMEHYACMADLFGRAGHLD 568



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 199/419 (47%), Gaps = 55/419 (13%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H +I+R+G+  D +L + LI+LY KC                               
Sbjct: 232 KEIHGYIVRHGVILDVYLNSALIDLYFKCR------------------------------ 261

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            D   A K+F+   + ++V +  +IS  V NG+ + AL ++  +  +  +P  +T +S+ 
Sbjct: 262 -DAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSIL 320

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A   L  ++ GR  HG +IK  L++   V +A++++YAKCG    A  +F  +S  + +
Sbjct: 321 PACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAI 380

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            + ++++  ++  +  EA+ +FR M  + V  D V++S+ L  CA               
Sbjct: 381 CWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACA--------------- 425

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                  +G+++H   IK  FE+DL   ++L++MYAK G ++ A ++F+ + E++ V+WN
Sbjct: 426 -NIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWN 484

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
            +IA YG       ++ L   M   G +PD +T + +L +C  +G ++ G   F  M   
Sbjct: 485 SIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEE 544

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                 +  +  M   + ++ +  EA ++   M F    P  +    +L +C   G +E
Sbjct: 545 YGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPF---PPAASVWGTLLGACRVHGNVE 600


>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
 gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
 gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
          Length = 767

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 215/711 (30%), Positives = 363/711 (51%), Gaps = 62/711 (8%)

Query: 81  PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           P  +   WN+L+ +  R       LS + +M   G  P+  T   V  A+  L  +  G 
Sbjct: 68  PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127

Query: 141 RCHGLVIKIGL---DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
             H   ++ GL   D ++ VA++L+ +YA+CG  + AV +F+EM E + V +TA++SG  
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187

Query: 198 KTDRVVEALEMFRLMIRKA----VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
              +  E L     M+R A       +S ++ S L     E CGV  ++           
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGL-----EACGVLGELSV--------- 233

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G  +H   +K G      + +SL  MY K    + A ++F  LPE+ +VSW  +I  Y
Sbjct: 234 --GTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAY 291

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-------------- 359
            +   + KA+EL   M+  G +PDEV    +L        ++ G+               
Sbjct: 292 CRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSV 351

Query: 360 ---------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                                +F  +      SW++M+ +Y ++    + ++L+REMQFR
Sbjct: 352 LIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFR 411

Query: 399 G---VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
                + D  +L  I+SSC+ +G L  G+  H  S+K  +  ++ VA+ LI +Y +C   
Sbjct: 412 DKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNF 471

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
           ++A ++F  +   D+V W+++I+  S      +A + + QM    + P   +  +V+SSC
Sbjct: 472 DVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSC 531

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           A L++   G  +H+ ++  G   D+ + +AL++MY KCG +  AR+ FD M  ++ VTWN
Sbjct: 532 ANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWN 591

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI GY  +G   +A++L+  M    VKP+ +TF+AIL+AC H+GLVD G E+F  M+ +
Sbjct: 592 VMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRME-E 650

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           + +EP L HY CM+D LG++GH  EAE ++  MP + D  IW  LL +C++H N  +  R
Sbjct: 651 YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLR 710

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            A++ F  DP+N   Y L++N Y S  +W+++  +R++M  + + K   +S
Sbjct: 711 VAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWS 761



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 160/620 (25%), Positives = 284/620 (45%), Gaps = 63/620 (10%)

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM----SNEGFVP 118
           A+C S  +  A +LFDEMPER+VV+W  +IS  V NG   + LS   +M     + G  P
Sbjct: 156 ARCGS--VRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARP 213

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
              T+ S  +A   L ++  G   HG  +K G+     V ++L S+Y KC  T+ A  +F
Sbjct: 214 NSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILF 273

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            E+ E + V++T+++    +     +A+E+F  M    +  D V +S     C   G G 
Sbjct: 274 PELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVIS-----CLLAGLGN 328

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
           ++ V             G+  H   ++  F   + + N+L+ MYAK   +D A  +F  L
Sbjct: 329 DAKVRG-----------GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRML 377

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMK---SCGFEPD------------------ 337
            +R   SW+ M+  Y +     K +EL + M+      FE D                  
Sbjct: 378 HQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLR 437

Query: 338 ---------------EVTSI-NMLVACV-RSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                          E +S+ N L++   R G+    R++F  + +  V +W+A++SSYS
Sbjct: 438 LGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYS 497

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
              + K+A+ L+ +M   GVKP+  TL  ++SSCA +  LE G+ +H+         D  
Sbjct: 498 HLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLS 557

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           + + L+ +Y KC +  +A ++F  + E D+V WN MI+G  ++   I+A   F  M +  
Sbjct: 558 ICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGN 617

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           + P   +F  +LS+C       +GR++  ++E+     ++   + ++++  K G +  A 
Sbjct: 618 VKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAE 677

Query: 561 QFFDMMH-GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
                M    +   W  ++     +   +  +R+ K   AS   P++  +  +++    S
Sbjct: 678 DVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFAS--DPENDGYYILMSNSYGS 735

Query: 620 GLVDVGVEIFNSMQLDHGVE 639
                 +E    M  +HGVE
Sbjct: 736 AEKWNEIEKLRDMMKNHGVE 755



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 206/474 (43%), Gaps = 73/474 (15%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +++ S   K D  E A  LF E+PE+++VSW +LI A  R G  EKA+ ++  M   G  
Sbjct: 254 SSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQ 313

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  + ++ +         V  G+  H  +++     ++ + NAL+S+YAKC     A  V
Sbjct: 314 PDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATV 373

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  + + +  ++++M+    K    ++ LE++R M  +                      
Sbjct: 374 FRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFR---------------------- 411

Query: 238 VESDVFAQSDN----------KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
            + D F    N          +  R   GQ  HC +IK     +  ++N+L+ MY + G+
Sbjct: 412 -DKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGN 470

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
            D A  IF  +  + VV+W+ +I+ Y     S  A+ L  +M + G +P+  T ++++ +
Sbjct: 471 FDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISS 530

Query: 348 C-----------------------------------VRSGDIKTGREMFDSMPSPSVSSW 372
           C                                   ++ G +   R+MFDSM    V +W
Sbjct: 531 CANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTW 590

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA--AS 430
           N M+S Y       +A+KLF  M+   VKP+  T   ILS+C   G+++ G+++      
Sbjct: 591 NVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEE 650

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
                ++ +Y    ++ +  K    + AE V   +P E D   W +++    ++
Sbjct: 651 YSLEPNLKHYAC--MVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMH 702



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 201/442 (45%), Gaps = 57/442 (12%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK  HA I+R    D   + N LI +Y+KC     A  +F  +  +D  SW++++ A C
Sbjct: 334 GGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYC 393

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS---NEGFVPTHIT 122
           K+                               GL+ K L +Y +M     + F     +
Sbjct: 394 KA-------------------------------GLDLKCLELYREMQFRDKDEFEYDTNS 422

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L S+  + + L  +  G+  H   IK    +N  VANAL+S+Y +CG    A  +F  + 
Sbjct: 423 LISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVK 482

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + VT++A++S  +      +AL ++  M+ + V  +S +L SV+  CA          
Sbjct: 483 TKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCA---------- 532

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                   +   HG+ +H     +G E DL +  +L+DMY K G +  A  +F ++ ER 
Sbjct: 533 ------NLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERD 586

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           VV+WNVMI+GYG   ++ +A++L   M+    +P+ +T + +L AC  +G +  GRE+F 
Sbjct: 587 VVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFT 646

Query: 363 SMP----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            M      P++  +  M+    +S + +EA  +   M    ++PD      +L +C    
Sbjct: 647 RMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMP---IEPDGGIWGTLLGACKMHD 703

Query: 419 ILESGKQVHAASLKTASHIDNY 440
             E G +V   +  +    D Y
Sbjct: 704 NFEMGLRVAKKAFASDPENDGY 725



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 16/271 (5%)

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +HA ++ +        A+ L+  YS      LA   F   P  D   WNS++      S 
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ------IEKDGYVND 539
                   ++MR +   P++F+   V S+ A+L +   G  VHA       +E DG V  
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVA- 146

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA----VRLYK 595
             V S+L+ MY +CG +  A + FD M  ++ V W  +I G   NG   E     VR+ +
Sbjct: 147 --VASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVR 204

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
                G +P+  T  + L AC   G + VG    +   +  GV       + +     + 
Sbjct: 205 SAGDGGARPNSRTMESGLEACGVLGELSVGT-CLHGFGVKAGVGHCPSVVSSLFSMYTKC 263

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSS-CR 685
               +A +L  E+P K D V W  L+ + CR
Sbjct: 264 DSTEDARILFPELPEK-DLVSWTSLIGAYCR 293


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 221/725 (30%), Positives = 370/725 (51%), Gaps = 58/725 (8%)

Query: 28  RLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVS 87
           RL   Y   +   +    F K+  +DI+  NA++SA  K   +  A K+F  +   NVVS
Sbjct: 105 RLSTRYGDPDLARAVHAQFLKL-EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVS 163

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           +  LIS   ++  E++A+ ++  M + G  P   T  ++  A    +D + G + HG+V+
Sbjct: 164 YTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVV 223

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
           K+GL   +++ NAL+ LY KCG+    + +FEEM E +  ++  ++S L K  +  EA +
Sbjct: 224 KLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFD 283

Query: 208 MFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            FR M + K + +D  SLS++L  CA                   + + GQQ+H L +K+
Sbjct: 284 YFRGMQLCKGLKVDHFSLSTLLTACAGS----------------VKPMKGQQLHALALKV 327

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           G E+ L +S+SL+  Y K G  +    +F  +P R V++W  MI  Y             
Sbjct: 328 GLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSY------------- 374

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                 +  G + +  E+F+ MP  +  S+NA+L+  S++++  
Sbjct: 375 ----------------------MEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGS 412

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
            A++LF EM   GV+    TL  I+++C  +   +  +Q+    +K     ++ + + L+
Sbjct: 413 RALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALV 472

Query: 447 GIYSKCQRNELAERVFH-RIPELDIVC-WNSMIAGLSLNSLDIEAF-MFFKQMRQNEMYP 503
            +Y++C R E AE++F+ R  E D      SMI G + N    EA  +F     +  +  
Sbjct: 473 DMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVM 532

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            +    ++LS C  +     G+Q+H    K G + +  VG+A + MY KC ++  A + F
Sbjct: 533 DEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVF 592

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS--GL 621
           + M+ ++ V+WN ++ G+  +  GD+A+ ++K M  +G+KPD ITF  I++A  H+   L
Sbjct: 593 NTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNL 652

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           VD    +F SM+ +H ++P L+HY   I  LGR G   EAE  I  MP + D  +W  LL
Sbjct: 653 VDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALL 712

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           +SCR++ N RL K AA  +  ++PK+   Y L +N+YS+ GRW     VRE M E    K
Sbjct: 713 NSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRK 772

Query: 742 DPAYS 746
            P+ S
Sbjct: 773 HPSQS 777



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 244/483 (50%), Gaps = 48/483 (9%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA  L+ GL     + + LI  Y+KC + +    LF+ MP +D+ +W  ++++  +
Sbjct: 317 GQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYME 376

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A ++F++MP+RN +S+N +++ L RN    +AL ++ +M  EG   +  TL S+
Sbjct: 377 FGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSI 436

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L   +  ++  G V+K G+  N  +  AL+ +Y +CG  + A  +F + S  N+
Sbjct: 437 ITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEND 496

Query: 187 VT--FTAMMSGLAKTDRVVEALEMFRL-MIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            T   T+M+ G A+  ++ EA+ +F       A+ +D V  +S+L +C   G       F
Sbjct: 497 YTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIG-------F 549

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
            +          G+Q+HC  +K G   +  + N+ + MY+K  +MD A  +F+ +  + +
Sbjct: 550 HE---------MGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDI 600

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD---IKTGREM 360
           VSWN ++AG+   +Q  KA+ + ++M+  G +PD +T   ++++  +  +   + + R +
Sbjct: 601 VSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSIT-FALIISAYKHTELNLVDSCRSL 659

Query: 361 FDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC- 414
           F SM +     P++  + + +S   +    +EA +  R M    ++PD      +L+SC 
Sbjct: 660 FVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMP---LEPDVYVWRALLNSCR 716

Query: 415 ----------AAMGILE-SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
                     AA  IL    K   +  LK+    + Y ASG    YS+  R ++ E+ F 
Sbjct: 717 INKNERLEKLAARNILAVEPKDPLSYILKS----NLYSASGR-WYYSEKVREDMREKGFR 771

Query: 464 RIP 466
           + P
Sbjct: 772 KHP 774



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 130/552 (23%), Positives = 237/552 (42%), Gaps = 123/552 (22%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +++ GL    F+CN L+ LY KC        LF++MP +DI SWN ++S+  K
Sbjct: 215 GSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVK 274

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITLAS 125
               EF Y                           ++A   +  M   +G    H +L++
Sbjct: 275 ----EFKY---------------------------DEAFDYFRGMQLCKGLKVDHFSLST 303

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------------- 169
           +  A    +    G++ H L +K+GL+ ++ V+++L+  Y KCG                
Sbjct: 304 LLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRD 363

Query: 170 ---WT------------KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              WT              AV VF +M + N +++ A+++GL++ D    ALE+F  M+ 
Sbjct: 364 VITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLE 423

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
           + V I   +L+S++       CG+    F  S          QQ+    +K G  ++  +
Sbjct: 424 EGVEISDCTLTSII-----TACGLLKS-FKVS----------QQIQGFVMKFGILSNSCI 467

Query: 275 SNSLLDMYAKNGDMDSAEVIF--SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
             +L+DMY + G M+ AE IF   +L          MI GY +  +  +AI L    +S 
Sbjct: 468 ETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSE 527

Query: 333 G-FEPDEVTSINMLVACVRSGDIKTGREM------------------------------- 360
           G    DEV S ++L  C   G  + G++M                               
Sbjct: 528 GAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDD 587

Query: 361 ----FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC-- 414
               F++M    + SWN +++ +       +A+ ++++M+  G+KPD  T A+I+S+   
Sbjct: 588 AVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKH 647

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQRNELAERVFHRIP-ELDIV 471
             + +++S + +   S++T  +I   +   +  I +  +    E AE+    +P E D+ 
Sbjct: 648 TELNLVDSCRSLF-VSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVY 706

Query: 472 CWNSMIAGLSLN 483
            W +++    +N
Sbjct: 707 VWRALLNSCRIN 718



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 41/198 (20%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H  GK +H H L++GL  +T + N  + +YSKC N   A  +F+ M  +DI SWN +++ 
Sbjct: 550 HEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAG 609

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                               +V+ W             +KAL ++ KM   G  P  IT 
Sbjct: 610 --------------------HVLHWQG-----------DKALGIWKKMEKAGIKPDSITF 638

Query: 124 ASVFKA--STALLDVEHGRRCHGLVIKIGLDKNIYVA----NALLSLYAKCGWTKHAVPV 177
           A +  A   T L  V+    C  L + +  + NI        + +S+  + G  + A   
Sbjct: 639 ALIISAYKHTELNLVD---SCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQT 695

Query: 178 FEEMS-EPNEVTFTAMMS 194
              M  EP+   + A+++
Sbjct: 696 IRNMPLEPDVYVWRALLN 713


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 210/693 (30%), Positives = 353/693 (50%), Gaps = 58/693 (8%)

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNI 155
           + NG   KA+S    M ++G  P   T +   K        + G   H  + +  L  + 
Sbjct: 42  INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              N+L+SLY+KCG  + A  +F+ M    + ++++AM+S  A  +    AL  F  MI 
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLH 273
                +    ++    C+       ++  +  D+ F             +K G+ ++D+ 
Sbjct: 162 NGYYPNEYCFAAATRACS------TAEFVSVGDSIFG----------FVVKTGYLQSDVC 205

Query: 274 LSNSLLDMYAKN-GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
           +   L+DM+ K  GD+ SA  +F  +PER+ V+W +MI    Q   + +AI+L   M   
Sbjct: 206 VGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILS 265

Query: 333 GFEPDEVTS--------------------------------------INMLVACVRSGDI 354
           G+EPD  T                                       INM   C   G +
Sbjct: 266 GYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSM 325

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENH-KEAIKLFREMQFRGVKPDRTTLAIILSS 413
              R++FD +   +V SW AM++ Y Q   + +EA+ LFR M    V P+  T +  L +
Sbjct: 326 CAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKA 385

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           CA +  L  G+QV   ++K      N VA+ LI +Y++  R + A + F  + E +++ +
Sbjct: 386 CANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISY 445

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           N++I   + N    EA   F ++    M  + F+FA++LS  A + +  +G Q+HA++ K
Sbjct: 446 NTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIK 505

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G   +  V +ALI MY +CG+I  A Q F+ M  +N ++W  +I G+A++G+  +A+ L
Sbjct: 506 SGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALEL 565

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +  M+  GV+P+ +T++A+L+ACSH GLV+ G + F SM  +HGV P ++HY CM+D LG
Sbjct: 566 FHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILG 625

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           R+G   EA   I+ MP K D ++W   L +CR+H N+ L K AA+ +   +P + A Y L
Sbjct: 626 RSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYIL 685

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L+N+Y+S  +WD++  +R+ M E  ++K+   S
Sbjct: 686 LSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCS 718



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 155/615 (25%), Positives = 273/615 (44%), Gaps = 89/615 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G L+H  + ++ L  D+   N LI LYSKC     A  +F  M                 
Sbjct: 85  GTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMG---------------- 128

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                           R+++SW+ ++S    N +  +AL  +  M   G+ P     A+ 
Sbjct: 129 --------------SSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAA 174

Query: 127 FKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKC-GWTKHAVPVFEEMSEP 184
            +A +    V  G    G V+K G L  ++ V   L+ ++ K  G    A  VFE+M E 
Sbjct: 175 TRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPER 234

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N VT+T M++ L +     EA+++F  MI      D  +LS V+  CA            
Sbjct: 235 NAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACA------------ 282

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIFSNLPER 301
                    + GQQ+H   I+ G   D  +   L++MYAK   +G M +A  IF  + + 
Sbjct: 283 ----NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338

Query: 302 SVVSWNVMIAGYGQK-YQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------ 348
           +V SW  MI GY QK     +A++L + M      P+  T  + L AC            
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   RSG I   R+ FD +   ++ S+N ++ +Y+++ N 
Sbjct: 399 FTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNS 458

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +EA++LF E++ +G+     T A +LS  A++G +  G+Q+HA  +K+   ++  V + L
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNAL 518

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YS+C   E A +VF  + + +++ W S+I G + +    +A   F +M +  + P  
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNL 578

Query: 506 FSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            ++  VLS+C+ +    +G +   +   + G +  +   + ++++  + G +  A QF +
Sbjct: 579 VTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFIN 638

Query: 565 MMHGK-NTVTWNEMI 578
            M  K + + W   +
Sbjct: 639 SMPYKADALVWRTFL 653



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 204/431 (47%), Gaps = 55/431 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH+  +R+GL  D  +   LI +Y+KC                      ++  + C 
Sbjct: 290 GQQLHSQAIRHGLTLDRCVGCCLINMYAKC----------------------SVDGSMCA 327

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALV-RNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                 A K+FD++ + NV SW  +I+  V + G +E+AL ++  M     +P H T +S
Sbjct: 328 ------ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             KA   L  +  G +     +K+G      VAN+L+S+YA+ G    A   F+ + E N
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++  ++   AK     EALE+F  +  + +   + + +S+L   A  G   +      
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGK------ 495

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+Q+H   IK G + +  + N+L+ MY++ G+++SA  +F ++ +R+V+S
Sbjct: 496 ----------GEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVIS 545

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  +I G+ +   +T+A+EL  +M   G  P+ VT I +L AC   G +  G + F SM 
Sbjct: 546 WTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMY 605

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           +     P +  +  M+    +S +  EAI+    M +   K D       L +C   G L
Sbjct: 606 TEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPY---KADALVWRTFLGACRVHGNL 662

Query: 421 ESGKQVHAASL 431
           E GK  HAA +
Sbjct: 663 ELGK--HAAKM 671



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 191/423 (45%), Gaps = 54/423 (12%)

Query: 367 PSVSSWNAMLSSYSQSENH---KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           P+ ++ N +     Q  N+    +AI     M  +G  PD  T ++ L  C      + G
Sbjct: 26  PTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIG 85

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI-PELDIVCWNSMIAGLSL 482
             VH    ++   +D+   + LI +YSKC + E A  +F  +    D++ W++M++  + 
Sbjct: 86  TLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFAN 145

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV-NDIF 541
           N++   A + F  M +N  YP ++ FA    +C+       G  +   + K GY+ +D+ 
Sbjct: 146 NNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVC 205

Query: 542 VGSALIEMYCKC-GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           VG  LI+M+ K  GD+  A + F+ M  +N VTW  MI    Q GY  EA+ L+ +MI S
Sbjct: 206 VGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILS 265

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV---------------------- 638
           G +PD  T   +++AC++  L+ +G ++ +S  + HG+                      
Sbjct: 266 GYEPDRFTLSGVISACANMELLLLGQQL-HSQAIRHGLTLDRCVGCCLINMYAKCSVDGS 324

Query: 639 --------EPILDH----YTCMIDCLGRAGHFHEAEM-------LIDEMPCKDDPVIWEV 679
                   + ILDH    +T MI    + G + E  +       L   +P   +   +  
Sbjct: 325 MCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIP---NHFTFSS 381

Query: 680 LLSSCRLHANVRLAKRAAEELFRL--DPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
            L +C   A +R+ ++      +L     N    SL++ +Y+  GR DD R   +++ E 
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS-MYARSGRIDDARKAFDILFEK 440

Query: 738 CIV 740
            ++
Sbjct: 441 NLI 443


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 211/690 (30%), Positives = 351/690 (50%), Gaps = 64/690 (9%)

Query: 100 LEEKALSVYNKMSNEGF--VPT--HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNI 155
           +  K  S  N + +  F  +PT  H  L+ + ++S  L+ V   +  H  +I   L  + 
Sbjct: 8   IANKPFSTCNPLKDGQFNQLPTIIHNFLSLLRESSKNLIWV---KSTHAQIITNSLSTDQ 64

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
           +VA  L+  Y+     + A  VF++  +P  +   AM+ G  ++ R  E LE+F LM  +
Sbjct: 65  FVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSR 124

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            + +DS S +  L  CA           +  D +      G ++    ++ G E +  + 
Sbjct: 125 NLEVDSCSCTFALKACA-----------SSLDYEM-----GMEIISSAVEKGMEKNRFVG 168

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           +S++    K G +  A+ +F  +P + VV WN +I GY Q      A +L   M   G +
Sbjct: 169 SSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIK 228

Query: 336 PDEVTSINMLVAC-----------------------------------VRSGDIKTGREM 360
           P  +T  +++ AC                                    + GDI++ R +
Sbjct: 229 PSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWV 288

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F  MP+ ++ SWNAM+S   ++    E+  LF  +       D TT+  +L  C+    L
Sbjct: 289 FYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASL 348

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
            +GK +H  ++++    +  +++ ++ +YSKC   + A  VF+R+ + +++ W +M+ GL
Sbjct: 349 ATGKILHGCAIRSFES-NLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGL 407

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           + N    +A   F QM++  +     +F +++ SCA L S  +GR +H  + + G+  DI
Sbjct: 408 AQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDI 467

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHG---KNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
              +AL++MY KCG I  A + F   HG   K+ V WN MI GY  +G+G +AV +Y  M
Sbjct: 468 VNMTALVDMYAKCGKINLAERIFS--HGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKM 525

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           I  G+KP+  TF+++L+ACSHS LV+ G+ +FNSM+ DH + PI  HY C++D L RAG 
Sbjct: 526 IEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGR 585

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
           F EA+ LI++MP +    + E LLS CR H N+ L  + +++L  LD  N   Y +L+NI
Sbjct: 586 FEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNI 645

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           Y+   RWD +  +R LM    + K P YSL
Sbjct: 646 YAEARRWDKVDYIRGLMRNRGLKKTPGYSL 675



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 148/597 (24%), Positives = 266/597 (44%), Gaps = 87/597 (14%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K  HA I+ N L  D F+  +L++ YS   +  +A+++FD+         NA+L    +S
Sbjct: 49  KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                  +LF  M  RN               LE  + S               T A   
Sbjct: 109 GRYRETLELFGLMRSRN---------------LEVDSCSC--------------TFA--L 137

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA  + LD E G       ++ G++KN +V ++++S   K G    A  VF+ M   + V
Sbjct: 138 KACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVV 197

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            + +++ G  +      A ++F  M    +    ++++S++  C   G           +
Sbjct: 198 CWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIG-----------N 246

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
            K  + +HG       + LG   D+ +  S +DMY+K GD++SA  +F  +P R++VSWN
Sbjct: 247 LKLGKCMHG-----YVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWN 301

Query: 308 VMIAGYGQKYQSTKAIELLQRM--KSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
            MI+G  +     ++ +L  R+   S GF  D  T +++L  C ++  + TG+ +     
Sbjct: 302 AMISGCVRNGLVGESFDLFHRLVRSSGGF--DLTTIVSLLQGCSQTASLATGKILHGCAI 359

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F+ M   +V +W AML   +Q+ + ++A++L
Sbjct: 360 RSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRL 419

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +MQ  G+  +  T   ++ SCA +G L+ G+ +H    +     D    + L+ +Y+K
Sbjct: 420 FAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAK 479

Query: 452 CQRNELAERVF-HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           C +  LAER+F H     D+V WNSMI G  ++    +A   + +M +  + P Q +F +
Sbjct: 480 CGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLS 539

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMM 566
           +LS+C+      QG  +   +E+D  +  I    A L+++  + G    A+   + M
Sbjct: 540 LLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKM 596



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 205/416 (49%), Gaps = 61/416 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H ++L  GL +D  +    +++YSK  +  SA+ +F KMP +++ SWNA       
Sbjct: 250 GKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNA------- 302

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITLA 124
                                   +IS  VRNGL  ++  +++++  S+ GF  T  T+ 
Sbjct: 303 ------------------------MISGCVRNGLVGESFDLFHRLVRSSGGFDLT--TIV 336

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+ +  +    +  G+  HG  I+   + N+ ++ A++ LY+KCG  K A  VF  M + 
Sbjct: 337 SLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDR 395

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N +T+TAM+ GLA+     +AL +F  M  + ++ +SV+  S++  CA  G         
Sbjct: 396 NVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLG--------- 446

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSV 303
               K  R++HG        +LGF  D+    +L+DMYAK G ++ AE IFS+    + V
Sbjct: 447 --SLKRGRSIHGH-----LFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDV 499

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           V WN MI GYG      +A+ +  +M   G +P++ T +++L AC  S  ++ G  +F+S
Sbjct: 500 VLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNS 559

Query: 364 MP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           M       P    +  ++   S++   +EA  L  +M F   +P    L  +LS C
Sbjct: 560 MERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPF---QPGTAVLEALLSGC 612



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 227/458 (49%), Gaps = 56/458 (12%)

Query: 47  DKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALS 106
           +K   K+ +  ++++S   K   +  A ++FD MP ++VV WN++I   V+ G  + A  
Sbjct: 158 EKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQ 217

Query: 107 VYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYA 166
           ++ +M   G  P+ IT+ S+ +A   + +++ G+  HG V+ +GL  +I V  + + +Y+
Sbjct: 218 LFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYS 277

Query: 167 KCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS 226
           K G  + A  VF +M   N V++ AM+SG  +   V E+ ++F  ++R +   D  ++ S
Sbjct: 278 KMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVS 337

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           +L     +GC   + +             G+ +H   I+  FE++L LS +++D+Y+K G
Sbjct: 338 LL-----QGCSQTASL-----------ATGKILHGCAIR-SFESNLILSTAIVDLYSKCG 380

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
            +  A  +F+ + +R+V++W  M+ G  Q   +  A+ L  +M+  G   + VT ++++ 
Sbjct: 381 SLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVH 440

Query: 347 ACVRSGDIKTGREM----------FDSMP--------------------------SPSVS 370
           +C   G +K GR +          FD +                           S  V 
Sbjct: 441 SCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVV 500

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
            WN+M++ Y    +  +A+ ++ +M   G+KP++TT   +LS+C+   ++E G  +  + 
Sbjct: 501 LWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSM 560

Query: 431 LK--TASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
            +      I+ + A  L+ + S+  R E A+ +  ++P
Sbjct: 561 ERDHNIRPIEKHYAC-LVDLLSRAGRFEEAQALIEKMP 597


>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
          Length = 897

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 215/711 (30%), Positives = 363/711 (51%), Gaps = 62/711 (8%)

Query: 81  PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           P  +   WN+L+ +  R       LS + +M   G  P+  T   V  A+  L  +  G 
Sbjct: 68  PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127

Query: 141 RCHGLVIKIGL---DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
             H   ++ GL   D ++ VA++L+ +YA+CG  + AV +F+EM E + V +TA++SG  
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187

Query: 198 KTDRVVEALEMFRLMIRKA----VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
              +  E L     M+R A       +S ++ S L     E CGV  ++           
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGL-----EACGVLGELSV--------- 233

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G  +H   +K G      + +SL  MY K    + A ++F  LPE+ +VSW  +I  Y
Sbjct: 234 --GTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAY 291

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-------------- 359
            +   + KA+EL   M+  G +PDEV    +L        ++ G+               
Sbjct: 292 CRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSV 351

Query: 360 ---------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                                +F  +      SW++M+ +Y ++    + ++L+REMQFR
Sbjct: 352 LIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFR 411

Query: 399 G---VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
                + D  +L  I+SSC+ +G L  G+  H  S+K  +  ++ VA+ LI +Y +C   
Sbjct: 412 DKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNF 471

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
           ++A ++F  +   D+V W+++I+  S      +A + + QM    + P   +  +V+SSC
Sbjct: 472 DVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSC 531

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           A L++   G  +H+ ++  G   D+ + +AL++MY KCG +  AR+ FD M  ++ VTWN
Sbjct: 532 ANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWN 591

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI GY  +G   +A++L+  M    VKP+ +TF+AIL+AC H+GLVD G E+F  M+ +
Sbjct: 592 VMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRME-E 650

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           + +EP L HY CM+D LG++GH  EAE ++  MP + D  IW  LL +C++H N  +  R
Sbjct: 651 YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLR 710

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            A++ F  DP+N   Y L++N Y S  +W+++  +R++M  + + K   +S
Sbjct: 711 VAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWS 761



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 160/620 (25%), Positives = 284/620 (45%), Gaps = 63/620 (10%)

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM----SNEGFVP 118
           A+C S  +  A +LFDEMPER+VV+W  +IS  V NG   + LS   +M     + G  P
Sbjct: 156 ARCGS--VRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARP 213

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
              T+ S  +A   L ++  G   HG  +K G+     V ++L S+Y KC  T+ A  +F
Sbjct: 214 NSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILF 273

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            E+ E + V++T+++    +     +A+E+F  M    +  D V +S     C   G G 
Sbjct: 274 PELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVIS-----CLLAGLGN 328

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
           ++ V             G+  H   ++  F   + + N+L+ MYAK   +D A  +F  L
Sbjct: 329 DAKVRG-----------GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRML 377

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMK---SCGFEPD------------------ 337
            +R   SW+ M+  Y +     K +EL + M+      FE D                  
Sbjct: 378 HQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLR 437

Query: 338 ---------------EVTSI-NMLVACV-RSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                          E +S+ N L++   R G+    R++F  + +  V +W+A++SSYS
Sbjct: 438 LGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYS 497

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
              + K+A+ L+ +M   GVKP+  TL  ++SSCA +  LE G+ +H+         D  
Sbjct: 498 HLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLS 557

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           + + L+ +Y KC +  +A ++F  + E D+V WN MI+G  ++   I+A   F  M +  
Sbjct: 558 ICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGN 617

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           + P   +F  +LS+C       +GR++  ++E+     ++   + ++++  K G +  A 
Sbjct: 618 VKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAE 677

Query: 561 QFFDMMH-GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
                M    +   W  ++     +   +  +R+ K   AS   P++  +  +++    S
Sbjct: 678 DVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFAS--DPENDGYYILMSNSYGS 735

Query: 620 GLVDVGVEIFNSMQLDHGVE 639
                 +E    M  +HGVE
Sbjct: 736 AEKWNEIEKLRDMMKNHGVE 755



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 206/474 (43%), Gaps = 73/474 (15%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +++ S   K D  E A  LF E+PE+++VSW +LI A  R G  EKA+ ++  M   G  
Sbjct: 254 SSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQ 313

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  + ++ +         V  G+  H  +++     ++ + NAL+S+YAKC     A  V
Sbjct: 314 PDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATV 373

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  + + +  ++++M+    K    ++ LE++R M  +                      
Sbjct: 374 FRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFR---------------------- 411

Query: 238 VESDVFAQSDN----------KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
            + D F    N          +  R   GQ  HC +IK     +  ++N+L+ MY + G+
Sbjct: 412 -DKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGN 470

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
            D A  IF  +  + VV+W+ +I+ Y     S  A+ L  +M + G +P+  T ++++ +
Sbjct: 471 FDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISS 530

Query: 348 C-----------------------------------VRSGDIKTGREMFDSMPSPSVSSW 372
           C                                   ++ G +   R+MFDSM    V +W
Sbjct: 531 CANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTW 590

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA--AS 430
           N M+S Y       +A+KLF  M+   VKP+  T   ILS+C   G+++ G+++      
Sbjct: 591 NVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEE 650

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
                ++ +Y    ++ +  K    + AE V   +P E D   W +++    ++
Sbjct: 651 YSLEPNLKHYAC--MVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMH 702



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 201/442 (45%), Gaps = 57/442 (12%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK  HA I+R    D   + N LI +Y+KC     A  +F  +  +D  SW++++ A C
Sbjct: 334 GGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYC 393

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS---NEGFVPTHIT 122
           K+                               GL+ K L +Y +M     + F     +
Sbjct: 394 KA-------------------------------GLDLKCLELYREMQFRDKDEFEYDTNS 422

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L S+  + + L  +  G+  H   IK    +N  VANAL+S+Y +CG    A  +F  + 
Sbjct: 423 LISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVK 482

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + VT++A++S  +      +AL ++  M+ + V  +S +L SV+  CA          
Sbjct: 483 TKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCA---------- 532

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                   +   HG+ +H     +G E DL +  +L+DMY K G +  A  +F ++ ER 
Sbjct: 533 ------NLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERD 586

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           VV+WNVMI+GYG   ++ +A++L   M+    +P+ +T + +L AC  +G +  GRE+F 
Sbjct: 587 VVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFT 646

Query: 363 SMP----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            M      P++  +  M+    +S + +EA  +   M    ++PD      +L +C    
Sbjct: 647 RMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMP---IEPDGGIWGTLLGACKMHD 703

Query: 419 ILESGKQVHAASLKTASHIDNY 440
             E G +V   +  +    D Y
Sbjct: 704 NFEMGLRVAKKAFASDPENDGY 725



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 16/271 (5%)

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +HA ++ +        A+ L+  YS      LA   F   P  D   WNS++      S 
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ------IEKDGYVND 539
                   ++MR +   P++F+   V S+ A+L +   G  VHA       +E DG V  
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVA- 146

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA----VRLYK 595
             V S+L+ MY +CG +  A + FD M  ++ V W  +I G   NG   E     VR+ +
Sbjct: 147 --VASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVR 204

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
                G +P+  T  + L AC   G + VG    +   +  GV       + +     + 
Sbjct: 205 SAGDGGARPNSRTMESGLEACGVLGELSVGT-CLHGFGVKAGVGHCPSVVSSLFSMYTKC 263

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSS-CR 685
               +A +L  E+P K D V W  L+ + CR
Sbjct: 264 DSTEDARILFPELPEK-DLVSWTSLIGAYCR 293


>gi|222616932|gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
          Length = 841

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 219/704 (31%), Positives = 369/704 (52%), Gaps = 43/704 (6%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
            F  N+ +   ++     +A+ LF++MP +++ S+NA++SA      L  A +LFDEMP 
Sbjct: 11  VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
           RN VSWN ++ A  ++G  E A  +++ M         I ++   +A    L  E     
Sbjct: 71  RNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARE----- 125

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
             L+ ++  +K     N ++S YAK G  + A+ + +EM  P+ V++ +++ GL + + +
Sbjct: 126 --LLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEI 183

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
             +++ F  M  K    D VS + +L    R G    +  F      FSR      +  +
Sbjct: 184 SRSVQFFDEMPDK----DLVSWNLMLEGYVRAGDLDVASAF------FSRIPSPNVISWV 233

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
                         +L++ Y + G M  A  +F  +PER+VV+WNV+++GY Q  Q   A
Sbjct: 234 --------------NLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAA 279

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
             L   M     E + ++   M+   VRSG ++  +++   MPS +V +  A++  Y +S
Sbjct: 280 YNLFIEMP----EKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKS 335

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               +A +LF  +  R    D      ++S     G+L+    +     +   + D    
Sbjct: 336 NLIDDARQLFDGIVVR----DAVCWNTMISGYVQCGMLDEAMVL----FQQMPNKDMISW 387

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + +I   ++  +   A  +F ++   + V WNS+I+G   N L +EA   F  MR++   
Sbjct: 388 NTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKS 447

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
               ++A  LS+ A L++   GRQ H+ + + G+++D   G+ALI  Y KCG +  ARQ 
Sbjct: 448 ADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQV 507

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           FD M  ++ V+WN +I GYA NG G E + ++++M A+ V+PD+IT V +L+ACSH+GL+
Sbjct: 508 FDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLI 567

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D G+  FNSM   + ++P+ +HYTCM+D LGRAG   EA  L+  M  + +  +W  LL 
Sbjct: 568 DEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLG 627

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDD 726
           +CR+H N  +A  AAE+LF L+P  ++ Y LL+NI    G+WDD
Sbjct: 628 ACRVHKNHEIAWLAAEKLFELEPCKASNYVLLSNICVEAGKWDD 671



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 11/238 (4%)

Query: 9   LLHAHILRN------GLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSW 57
           L+H ++  N       LFD     D    N +I  Y +C     A  LF +MP+KD+ SW
Sbjct: 328 LMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISW 387

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +++   +   +  A  +F +M  RN VSWN++IS  V+NGL  +AL  +  M  +   
Sbjct: 388 NTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKS 447

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
               T A    AS  L  ++ GR+ H L+++ G   +    NAL+S YAKCG    A  V
Sbjct: 448 ADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQV 507

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           F+EM   + V++ A++ G A      E + +FR M   +V  D ++L  VL  C+  G
Sbjct: 508 FDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAG 565



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 64/225 (28%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  H+ ++R G   D+   N LI  Y+KC     A+ +FD+M  +DI SWNA       
Sbjct: 469 GRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNA------- 521

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LI     NG   + ++V+ +M      P  ITL  V
Sbjct: 522 ------------------------LIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVV 557

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A +      H     GL+     D+ ++  N+++ LY+         PV E       
Sbjct: 558 LSACS------HA----GLI-----DEGLHFFNSMIKLYS-------LKPVAEH------ 589

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             +T M+  L +  R+ EA E+ + M    +  ++    ++LG C
Sbjct: 590 --YTCMVDLLGRAGRLREAFELVQGM---QIQPNAGVWGALLGAC 629


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 218/645 (33%), Positives = 336/645 (52%), Gaps = 57/645 (8%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H  V+K G D ++++ N L+++Y + G    A  +F+EM + N VT+  ++SG  +    
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            +A  + + MI +    +  +  S +  C       ES ++ +          G+QVH  
Sbjct: 83  EDACGVLKEMIFEGFLPNRFAFGSAIRACQ------ESMLWRRK---------GRQVHGY 127

Query: 263 TIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
            I+ G  +A + + N L++MYAK GD+D A  +F  + ++  VSWN MI G  Q      
Sbjct: 128 AIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFED 187

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---------------------- 359
           A++    M+  G  P     I+ L +C   G I  G++                      
Sbjct: 188 AVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLA 247

Query: 360 -------------MFDSMPSPSVSSWNAMLSSYSQS-ENHKEAIKLFREMQFRGVKPDRT 405
                        +F  M      SWN ++ + + S  +  EAI++F EM   G  P+R 
Sbjct: 248 LYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRV 307

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T   +L++ +++   +   Q+HA  LK     DN + + L+  Y K    E  E +F R+
Sbjct: 308 TFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRM 367

Query: 466 PEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
            E  D V WNSMI+G   N L  +A      M Q       F+FATVLS+CA +++   G
Sbjct: 368 SERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECG 427

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
            +VHA   +    +D+ +GSAL++MY KCG I  A +FF++M  +N  +WN MI GYA++
Sbjct: 428 MEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARH 487

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G+GD A+RL+  M  SG  PD ITFV +L+ACSH GLVD G E F SM   +G+ P ++H
Sbjct: 488 GHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEH 547

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR---LAKRAAEELF 701
           Y+CM+D LGRAG   + E  I++MP K + +IW  +L +C    N R   L +RAAE LF
Sbjct: 548 YSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGAC-CRGNGRKTELGRRAAEMLF 606

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +DP+N+  Y LL+N+Y+S G+W+D+   R  M E  + K+   S
Sbjct: 607 NMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCS 651



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 187/646 (28%), Positives = 304/646 (47%), Gaps = 89/646 (13%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           L H ++L++G   D FLCN LI +Y +  +  SA+                         
Sbjct: 21  LFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSAR------------------------- 55

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
                 KLFDEMP+RN V+W  LIS   +NG+ E A  V  +M  EGF+P      S  +
Sbjct: 56  ------KLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIR 109

Query: 129 A-STALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           A   ++L    GR+ HG  I+ GL D  + V N L+++YAKCG   HA  VF  M + + 
Sbjct: 110 ACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDS 169

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +M++GL +     +A++ +  M +  +   + +L S L  CA  GC          
Sbjct: 170 VSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGC---------- 219

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                  + GQQ H   IKLG + D+ +SN+LL +YA+   +   + +FS + ER  VSW
Sbjct: 220 ------ILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSW 273

Query: 307 NVMIAGYGQKYQS-TKAIELLQRMKSCGFEPDEVTSINM--------------------- 344
           N +I        S ++AIE+   M   G+ P+ VT IN+                     
Sbjct: 274 NTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALIL 333

Query: 345 -------------LVACV-RSGDIKTGREMFDSMPSPSVS-SWNAMLSSYSQSENHKEAI 389
                        L+AC  +SG+++   E+F  M       SWN+M+S Y  +E   +A+
Sbjct: 334 KYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAM 393

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            L   M  RG + D  T A +LS+CA +  LE G +VHA +++     D  + S L+ +Y
Sbjct: 394 DLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMY 453

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           SKC R + A R F+ +P  ++  WNSMI+G + +     A   F +M+ +   P   +F 
Sbjct: 454 SKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFV 513

Query: 510 TVLSSCAKLSSSFQGRQ-VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
            VLS+C+ +    +G +   +  E  G V  +   S ++++  + G++     F + M  
Sbjct: 514 GVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPI 573

Query: 569 K-NTVTWNEMIHGYAQ-NGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           K N + W  ++    + NG   E  R   +M+ +    + + +V +
Sbjct: 574 KPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLL 619



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 31/133 (23%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA  +R  L  D  + + L+++YSKC     A   F+ MP +++YSWN+       
Sbjct: 427 GMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNS------- 479

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +IS   R+G  + AL ++ +M   G +P HIT   V
Sbjct: 480 ------------------------MISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGV 515

Query: 127 FKASTALLDVEHG 139
             A + +  V+ G
Sbjct: 516 LSACSHIGLVDEG 528


>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
 gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 192/597 (32%), Positives = 311/597 (52%), Gaps = 104/597 (17%)

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM------------------------- 288
           ++ + VH   IK GF  ++ + N L+D Y+K G +                         
Sbjct: 37  IYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGL 96

Query: 289 ------DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
                 D A+ +F ++PER   +WN M++G+ Q  +  +A+     M   GF  +E +  
Sbjct: 97  TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156

Query: 343 NMLVACV-----------------------------------RSGDIKTGREMFDSMPSP 367
           ++L AC                                    + G++   + +FD M   
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +V SWN++++ + Q+    EA+ +F+ M    V+PD  TLA ++S+CA++  ++ G++VH
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276

Query: 428 AASLKTASHIDNYVAS-GLIGIYSKCQRNELAERVFHRIP-------------------- 466
              +K     ++ + S   + +Y+KC R + A  +F  +P                    
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336

Query: 467 -----------ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
                      E ++V WN++IAG + N  + EA   F  +++  + PT +SFA +L +C
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396

Query: 516 AKLSSSFQGRQVHAQIEKDGYV------NDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           A L+    G Q H  + K G+       +DIFVG++LI+MY KCG +      F  M  +
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + V+WN MI G+AQNGYG+EA+ L+++M+ SG KPD IT + +L+AC H+G V+ G   F
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           +SM  D GV P+ DHYTCM+D LGRAG   EA+ +I+EMP + D VIW  LL++C++H N
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + L K  AE+L  ++P NS PY LL+N+Y+ LG+W+D+  VR+ M +  + K P  S
Sbjct: 577 ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 633



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 180/615 (29%), Positives = 301/615 (48%), Gaps = 89/615 (14%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + +HA ++++G  ++ F+ NRLI+ YSKC +    + +FDKMP ++IY+WN++++   K 
Sbjct: 40  RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
             L+ A  LF  MPER+  +WN+++S   ++   E+AL  +  M  EGFV    + ASV 
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A + L D+  G + H L+ K     ++Y+ +AL+ +Y+KCG    A  VF+EM + N V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++ ++++   +    VEAL++F++M+   V  D V+L+SV+  CA           + S 
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA-----------SLSA 268

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
            K  + VHG+ V    ++     D+ LSN+ +DMYAK   +  A  IF ++P R+V++  
Sbjct: 269 IKVGQEVHGRVVKNDKLR----NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSP 367
            MI+GY     STKA                                   R MF  M   
Sbjct: 325 SMISGYAMA-ASTKA----------------------------------ARLMFTKMAER 349

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +V SWNA+++ Y+Q+  ++EA+ LF  ++   V P   + A IL +CA +  L  G Q H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409

Query: 428 AASLK------TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
              LK      +    D +V + LI +Y KC   E    VF ++ E D V WN+MI G +
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N    EA   F++M ++   P   +   VLS+C       +GR   + + +D       
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD------- 522

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
            G A +  +  C                       M+    + G+ +EA  + ++M    
Sbjct: 523 FGVAPLRDHYTC-----------------------MVDLLGRAGFLEEAKSMIEEM---P 556

Query: 602 VKPDDITFVAILTAC 616
           ++PD + + ++L AC
Sbjct: 557 MQPDSVIWGSLLAAC 571



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 209/464 (45%), Gaps = 95/464 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H+ I ++    D ++ + L+++YSKC N + AQ +FD+M  +++ SWN+       
Sbjct: 171 GVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNS------- 223

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LI+   +NG   +AL V+  M      P  +TLASV
Sbjct: 224 ------------------------LITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259

Query: 127 FKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHA------VPV-- 177
             A  +L  ++ G+  HG V+K   L  +I ++NA + +YAKC   K A      +P+  
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319

Query: 178 -----------------------FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
                                  F +M+E N V++ A+++G  +     EAL +F L+ R
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGF----- 268
           ++V     S +++L  CA                     +H G Q H   +K GF     
Sbjct: 380 ESVCPTHYSFANILKACADLA-----------------ELHLGMQAHVHVLKHGFKFQSG 422

Query: 269 -EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
            E D+ + NSL+DMY K G ++   ++F  + ER  VSWN MI G+ Q     +A+EL +
Sbjct: 423 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 482

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQS 382
            M   G +PD +T I +L AC  +G ++ GR  F SM      +P    +  M+    ++
Sbjct: 483 EMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 542

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
              +EA  +  EM    ++PD      +L++C     +  GK V
Sbjct: 543 GFLEEAKSMIEEMP---MQPDSVIWGSLLAACKVHRNITLGKYV 583



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 168/325 (51%), Gaps = 35/325 (10%)

Query: 403 DRTTLAIILSSCAAMGILE-SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           D +  A +L SC    +     + VHA+ +K+    + ++ + LI  YSKC   E   +V
Sbjct: 18  DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77

Query: 462 FHRIPELDIVCWNSMIAGLS-LNSLD------------------------------IEAF 490
           F ++P+ +I  WNS++ GL+ L  LD                               EA 
Sbjct: 78  FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
            +F  M +      ++SFA+VLS+C+ L+   +G QVH+ I K  +++D+++GSAL++MY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            KCG++  A++ FD M  +N V+WN +I  + QNG   EA+ +++ M+ S V+PD++T  
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
           ++++AC+    + VG E+   +  +  +   +      +D   +     EA  + D MP 
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317

Query: 671 KDDPVIWEV-LLSSCRLHANVRLAK 694
           ++  VI E  ++S   + A+ + A+
Sbjct: 318 RN--VIAETSMISGYAMAASTKAAR 340



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 163/327 (49%), Gaps = 16/327 (4%)

Query: 7   GKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ +H  +++N  L +D  L N  +++Y+KC+    A+ +FD MP +++ +  +++S   
Sbjct: 272 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 331

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +   + A  +F +M ERNVVSWN LI+   +NG  E+ALS++  +  E   PTH + A+
Sbjct: 332 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 391

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGL------DKNIYVANALLSLYAKCGWTKHAVPVFE 179
           + KA   L ++  G + H  V+K G       + +I+V N+L+ +Y KCG  +    VF 
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           +M E + V++ AM+ G A+     EALE+FR M+      D +++  VL  C   G   E
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511

Query: 240 S-DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
               F+     F          C+   LG    L  + S+++      D     VI+ +L
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPD----SVIWGSL 567

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIEL 325
                V  N+ +     KY + K +E+
Sbjct: 568 LAACKVHRNITLG----KYVAEKLLEV 590


>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Brachypodium distachyon]
          Length = 773

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 238/790 (30%), Positives = 387/790 (48%), Gaps = 109/790 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL-SAQCKSD 68
           LHA    +GL        +L+  YS       A   F   P  D + WN++L S  C SD
Sbjct: 34  LHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCASD 93

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
                   FD                         ALS + +M   G  P+  T      
Sbjct: 94  --------FDS------------------------ALSAHRRMRASGARPSRFTAPLAAS 121

Query: 129 ASTALLDVEHGRRCHGLVIKIGL---DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           A+  L  +  G   H   +K GL   D ++ V+++L+ +YA+CG    AV +F+EM E +
Sbjct: 122 AAAELAALPVGTSVHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERD 181

Query: 186 EVTFTAMMSGLAKTDRVVEAL----EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            V +TA++SG  +     + +    +M RL        +S ++ S L     E CGV  +
Sbjct: 182 VVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPNSRTMESGL-----EACGVLGE 236

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           + A           G+ +H   +K G      + ++L  MY+K    + A ++F  L E+
Sbjct: 237 LSA-----------GRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPELTEK 285

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG-----DIKT 356
            VVSW  +I  Y ++  + +A+EL Q M+  G +PDEV     LV+CV SG     ++  
Sbjct: 286 DVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEV-----LVSCVLSGLGSSANVNR 340

Query: 357 GR-----------------------------------EMFDSMPSPSVSSWNAMLSSYSQ 381
           G+                                    +F  +      SW+ M++ Y +
Sbjct: 341 GKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCK 400

Query: 382 SENHKEAIKLFREMQFRGVKP---DRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           +    + ++L+R+MQ R       D T+L   +SSC+ +G L  G+ VH  S+K     +
Sbjct: 401 AGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLD-E 459

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPEL--DIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
           N + + LIG+Y +C   ELA ++F  + +L  D+V WN++I+  S      +A   + QM
Sbjct: 460 NSITNSLIGMYGRCGNFELACKIFA-VAKLRRDVVTWNALISSYSHVGRSNDALSLYGQM 518

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
              ++ P   +  TV+S+CA L++   G  +H+ ++  G  +D+ + +AL++MY KCG +
Sbjct: 519 LTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQL 578

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             AR  FD M  ++ VTWN MI GY  +G  ++A++L+ +M A  +KP+ +TF+AIL+AC
Sbjct: 579 GTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSAC 638

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
            H+GLVD G ++F  M   + +EP L HY CM+D LG++G   EAE L+  MP K D  +
Sbjct: 639 CHAGLVDEGRKLFIRMG-GYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGV 697

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W  LLS+C++H N  +  R A++ F  DP+N   Y L++N Y S  +WD++  +R+ M  
Sbjct: 698 WGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAEKWDEIEKLRDTMKN 757

Query: 737 NCIVKDPAYS 746
             + K   +S
Sbjct: 758 YGVEKGVGWS 767



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 205/460 (44%), Gaps = 87/460 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ LH + ++ G+ D   + + L  +YSKC+ T  A  LF ++  KD+ SW  ++ A C
Sbjct: 239 AGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYC 298

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                          R GL  +A+ ++ +M   G  P  + ++ 
Sbjct: 299 -------------------------------RRGLAREAVELFQEMEQSGLQPDEVLVSC 327

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V     +  +V  G+  H ++I+     ++ +AN+L+S+Y K      A  VF  + + +
Sbjct: 328 VLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRD 387

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRK---AVSIDSVSLSSVLGVCAREGCGVESDV 242
           + +++ M++G  K    V+ LE++R M  +       D  SL S +  C+R G       
Sbjct: 388 DESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLG------- 440

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
                    R   GQ VHC +IK   + +  ++NSL+ MY + G+ + A  IF+     R
Sbjct: 441 ---------RLRLGQSVHCYSIKCLLDEN-SITNSLIGMYGRCGNFELACKIFAVAKLRR 490

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
            VV+WN +I+ Y    +S  A+ L  +M +   +P+  T I ++ AC             
Sbjct: 491 DVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLH 550

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G + T R +FDSM    V +WN M+S Y       
Sbjct: 551 SYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEAN 610

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           +A+KLF EM+   +KP+  T   ILS+C   G+++ G+++
Sbjct: 611 QALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKL 650



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 55/297 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMP-HKDIYSWNAILSAQC 65
           G+ +H + ++  L D+  + N LI +Y +C N   A  +F      +D+ +WNA      
Sbjct: 445 GQSVHCYSIKC-LLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNA------ 497

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    LIS+    G    ALS+Y +M  E   P   TL +
Sbjct: 498 -------------------------LISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLIT 532

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   L  +EHG   H  V  +GL+ ++ ++ AL+ +Y KCG    A  +F+ M + +
Sbjct: 533 VISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRD 592

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+  M+SG        +AL++F  M   ++  +S++  ++L  C   G   E      
Sbjct: 593 VVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDE------ 646

Query: 246 SDNKFSRNVHGQQVHCLTIKLG---FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                     G++   L I++G    E +L     ++D+  K+G +  AE +   +P
Sbjct: 647 ----------GRK---LFIRMGGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMP 690


>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
          Length = 918

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 215/711 (30%), Positives = 363/711 (51%), Gaps = 62/711 (8%)

Query: 81  PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           P  +   WN+L+ +  R       LS + +M   G  P+  T   V  A+  L  +  G 
Sbjct: 68  PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127

Query: 141 RCHGLVIKIGL---DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
             H   ++ GL   D ++ VA++L+ +YA+CG  + AV +F+EM E + V +TA++SG  
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187

Query: 198 KTDRVVEALEMFRLMIRKA----VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
              +  E L     M+R A       +S ++ S L     E CGV  ++           
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGL-----EACGVLGELSV--------- 233

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G  +H   +K G      + +SL  MY K    + A ++F  LPE+ +VSW  +I  Y
Sbjct: 234 --GTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAY 291

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-------------- 359
            +   + KA+EL   M+  G +PDEV    +L        ++ G+               
Sbjct: 292 CRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSV 351

Query: 360 ---------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                                +F  +      SW++M+ +Y ++    + ++L+REMQFR
Sbjct: 352 LIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFR 411

Query: 399 G---VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
                + D  +L  I+SSC+ +G L  G+  H  S+K  +  ++ VA+ LI +Y +C   
Sbjct: 412 DKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNF 471

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
           ++A ++F  +   D+V W+++I+  S      +A + + QM    + P   +  +V+SSC
Sbjct: 472 DVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSC 531

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           A L++   G  +H+ ++  G   D+ + +AL++MY KCG +  AR+ FD M  ++ VTWN
Sbjct: 532 ANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWN 591

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI GY  +G   +A++L+  M    VKP+ +TF+AIL+AC H+GLVD G E+F  M+ +
Sbjct: 592 VMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRME-E 650

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           + +EP L HY CM+D LG++GH  EAE ++  MP + D  IW  LL +C++H N  +  R
Sbjct: 651 YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLR 710

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            A++ F  DP+N   Y L++N Y S  +W+++  +R++M  + + K   +S
Sbjct: 711 VAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWS 761



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 160/620 (25%), Positives = 284/620 (45%), Gaps = 63/620 (10%)

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM----SNEGFVP 118
           A+C S  +  A +LFDEMPER+VV+W  +IS  V NG   + LS   +M     + G  P
Sbjct: 156 ARCGS--VRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARP 213

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
              T+ S  +A   L ++  G   HG  +K G+     V ++L S+Y KC  T+ A  +F
Sbjct: 214 NSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILF 273

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            E+ E + V++T+++    +     +A+E+F  M    +  D V +S     C   G G 
Sbjct: 274 PELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVIS-----CLLAGLGN 328

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
           ++ V             G+  H   ++  F   + + N+L+ MYAK   +D A  +F  L
Sbjct: 329 DAKVRG-----------GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRML 377

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMK---SCGFEPD------------------ 337
            +R   SW+ M+  Y +     K +EL + M+      FE D                  
Sbjct: 378 HQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLR 437

Query: 338 ---------------EVTSI-NMLVACV-RSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                          E +S+ N L++   R G+    R++F  + +  V +W+A++SSYS
Sbjct: 438 LGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYS 497

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
              + K+A+ L+ +M   GVKP+  TL  ++SSCA +  LE G+ +H+         D  
Sbjct: 498 HLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLS 557

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           + + L+ +Y KC +  +A ++F  + E D+V WN MI+G  ++   I+A   F  M +  
Sbjct: 558 ICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGN 617

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           + P   +F  +LS+C       +GR++  ++E+     ++   + ++++  K G +  A 
Sbjct: 618 VKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAE 677

Query: 561 QFFDMMH-GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
                M    +   W  ++     +   +  +R+ K   AS   P++  +  +++    S
Sbjct: 678 DVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFAS--DPENDGYYILMSNSYGS 735

Query: 620 GLVDVGVEIFNSMQLDHGVE 639
                 +E    M  +HGVE
Sbjct: 736 AEKWNEIEKLRDMMKNHGVE 755



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 206/474 (43%), Gaps = 73/474 (15%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +++ S   K D  E A  LF E+PE+++VSW +LI A  R G  EKA+ ++  M   G  
Sbjct: 254 SSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQ 313

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  + ++ +         V  G+  H  +++     ++ + NAL+S+YAKC     A  V
Sbjct: 314 PDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATV 373

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  + + +  ++++M+    K    ++ LE++R M  +                      
Sbjct: 374 FRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFR---------------------- 411

Query: 238 VESDVFAQSDN----------KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
            + D F    N          +  R   GQ  HC +IK     +  ++N+L+ MY + G+
Sbjct: 412 -DKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGN 470

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
            D A  IF  +  + VV+W+ +I+ Y     S  A+ L  +M + G +P+  T ++++ +
Sbjct: 471 FDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISS 530

Query: 348 C-----------------------------------VRSGDIKTGREMFDSMPSPSVSSW 372
           C                                   ++ G +   R+MFDSM    V +W
Sbjct: 531 CANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTW 590

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA--AS 430
           N M+S Y       +A+KLF  M+   VKP+  T   ILS+C   G+++ G+++      
Sbjct: 591 NVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEE 650

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
                ++ +Y    ++ +  K    + AE V   +P E D   W +++    ++
Sbjct: 651 YSLEPNLKHYAC--MVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMH 702



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 201/442 (45%), Gaps = 57/442 (12%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK  HA I+R    D   + N LI +Y+KC     A  +F  +  +D  SW++++ A C
Sbjct: 334 GGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYC 393

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS---NEGFVPTHIT 122
           K+                               GL+ K L +Y +M     + F     +
Sbjct: 394 KA-------------------------------GLDLKCLELYREMQFRDKDEFEYDTNS 422

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L S+  + + L  +  G+  H   IK    +N  VANAL+S+Y +CG    A  +F  + 
Sbjct: 423 LISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVK 482

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + VT++A++S  +      +AL ++  M+ + V  +S +L SV+  CA          
Sbjct: 483 TKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCA---------- 532

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                   +   HG+ +H     +G E DL +  +L+DMY K G +  A  +F ++ ER 
Sbjct: 533 ------NLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERD 586

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           VV+WNVMI+GYG   ++ +A++L   M+    +P+ +T + +L AC  +G +  GRE+F 
Sbjct: 587 VVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFT 646

Query: 363 SMP----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            M      P++  +  M+    +S + +EA  +   M    ++PD      +L +C    
Sbjct: 647 RMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMP---IEPDGGIWGTLLGACKMHD 703

Query: 419 ILESGKQVHAASLKTASHIDNY 440
             E G +V   +  +    D Y
Sbjct: 704 NFEMGLRVAKKAFASDPENDGY 725



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 125/304 (41%), Gaps = 17/304 (5%)

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +HA ++ +        A+ L+  YS      LA   F   P  D   WNS++      S 
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ------IEKDGYVND 539
                   ++MR +   P++F+   V S+ A+L +   G  VHA       +E DG V  
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVA- 146

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA----VRLYK 595
             V S+L+ MY +CG +  A + FD M  ++ V W  +I G   NG   E     VR+ +
Sbjct: 147 --VASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVR 204

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
                G +P+  T  + L AC   G + VG    +   +  GV       + +     + 
Sbjct: 205 SAGDGGARPNSRTMESGLEACGVLGELSVGT-CLHGFGVKAGVGHCPSVVSSLFSMYTKC 263

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSS-CRL-HANVRLAKRAAEELFRLDPKNSAPYSL 713
               +A +L  E+P K D V W  L+ + CR  HA   +      E   L P       L
Sbjct: 264 DSTEDARILFPELPEK-DLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCL 322

Query: 714 LANI 717
           LA +
Sbjct: 323 LAGL 326


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 208/649 (32%), Positives = 344/649 (53%), Gaps = 54/649 (8%)

Query: 136 VEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           ++ GR  H  +IK+    + IY+AN+L++ YAKC     A  VF+ +   + +++  +++
Sbjct: 23  LQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLIN 82

Query: 195 GLAKTDRVVEA--LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           G ++      +  +E+F+ M    +  ++ + S +               F  + N  S 
Sbjct: 83  GYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGI---------------FTAASN-LSS 126

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              GQQ H + IK+    D+ + +SLL+MY K G +  A  +F  +PER+ V+W  MI+G
Sbjct: 127 IFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISG 186

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----VRSGD------IKTGREMF 361
           Y  +  + +A E+ + M+    + +E    ++L A      V SG       +KTG  +F
Sbjct: 187 YAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVF 246

Query: 362 DSMPSPSVS------------------------SWNAMLSSYSQSENHKEAIKLFREMQF 397
            S+ +  V+                        +W+AM++ Y+QS +  +A+KLF  M F
Sbjct: 247 LSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHF 306

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
            G+ P   TL  +L++C+    +E GKQVH   LK       Y+ + L+ +Y+K    E 
Sbjct: 307 AGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTED 366

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A + F+ + + D+V W SMIAG   N  + +A   + +M+   + P + + A+VL +C+ 
Sbjct: 367 ARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSN 426

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           L++  QGRQ+HA+  K G   ++ +GSAL  MY KCG++      F  M  ++ ++WN M
Sbjct: 427 LAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAM 486

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I G +QNGYG EA+ L+++M     KPDD+TFV +L+ACSH GLVD G   F  M  + G
Sbjct: 487 ISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFG 546

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           + P ++HY CM+D L RAG  +EA+  I+         +W +LL +CR + N  L   A 
Sbjct: 547 LLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAG 606

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           E+L  L  + S+ Y LL+ IY++LGR +D+  VR +M    + K+P  S
Sbjct: 607 EKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCS 655



 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 166/603 (27%), Positives = 290/603 (48%), Gaps = 86/603 (14%)

Query: 1   KKAHVAGKLLHAHILRNGLFDD-TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           +K+   G+ LHA I++        +L N LI  Y+KC +   A+ +FD++ +KD      
Sbjct: 20  QKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKD------ 73

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKA--LSVYNKMSNEGFV 117
                                    V+SWN LI+   + G    +  + ++ +M  +  +
Sbjct: 74  -------------------------VISWNCLINGYSQQGPTGSSFVMELFQRMRADNIL 108

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T + +F A++ L  +  G++ H + IK+    +++V ++LL++Y K G    A  V
Sbjct: 109 PNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREV 168

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+ M E NEVT+  M+SG A      EA E+F LM R+   ++  + +SVL   A     
Sbjct: 169 FDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALA----- 223

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                F  S         G+Q+HCL +K G    L + N+L+ MYAK G +D +  +F  
Sbjct: 224 --VPEFVDS---------GKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEM 272

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
             +++ ++W+ MI GY Q   S KA++L  RM   G  P E T + +L AC         
Sbjct: 273 SNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEG 332

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      +SG  +  R+ F+ +  P +  W +M++ Y Q+
Sbjct: 333 KQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQN 392

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
             +++A+ L+  MQ  G+ P+  T+A +L +C+ +   + G+Q+HA ++K    ++  + 
Sbjct: 393 GENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIG 452

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           S L  +Y+KC   E    VF R+PE DI+ WN+MI+GLS N    EA   F++MRQ +  
Sbjct: 453 SALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTK 512

Query: 503 PTQFSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
           P   +F  VLS+C+ +     G        ++ G +  +   + ++++  + G +Y A++
Sbjct: 513 PDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKE 572

Query: 562 FFD 564
           F +
Sbjct: 573 FIE 575



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 22/224 (9%)

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND-IFVGSALIEMYCKCGDIYGA 559
           ++P   S    L       S  +GR +HAQI K    +  I++ ++LI  Y KC  +  A
Sbjct: 3   LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA--VRLYKDMIASGVKPDDITFVAILTACS 617
           +  FD +H K+ ++WN +I+GY+Q G    +  + L++ M A  + P+  TF  I TA S
Sbjct: 63  KLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAAS 122

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHY------TCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +   +  G       Q  H V   +  +      + +++   +AG   EA  + D MP +
Sbjct: 123 NLSSIFFG-------QQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPER 175

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAE--ELFRLDPKNSAPYSL 713
           ++ V W  ++S    +A  RLA  A E  EL R + ++   ++ 
Sbjct: 176 NE-VTWATMISG---YAIQRLAGEAFEVFELMRREEEDVNEFAF 215


>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 907

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 223/726 (30%), Positives = 379/726 (52%), Gaps = 45/726 (6%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           + F  N+ I    K      A+ +F  + HK+  ++N++++   K+  +  A +LFD+M 
Sbjct: 16  NVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMS 75

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
           +RN+VSWN +I+  + N + E+A  +++ M+       + + A +    T    +E  R 
Sbjct: 76  QRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAER----DNFSWALMITCYTRKGMLEKARE 131

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
              LV    LD   +  NA+++ YAK G    A  VFE+M   + V++ +M++G  +  +
Sbjct: 132 LFELVPD-KLDTACW--NAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGK 188

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
           +  A++ F  M  + V   ++ ++  +  C     G   ++F +  +          V  
Sbjct: 189 MGLAMKFFERMAERNVVSWNLMVAGFVNNC---DLGSAWELFEKIPDP-------NAVSW 238

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
           +T+  GF              A++G +  A  +F  +P ++VVSWN MIA Y Q  Q  +
Sbjct: 239 VTMLCGF--------------ARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDE 284

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
           A++L +         D V+   M+   VR G +   RE+++ MP   V++  A++S   Q
Sbjct: 285 AVKLFKETPY----KDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQ 340

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +    EA ++F ++  R         AI  +S  A G  +SG+   A +L     + N V
Sbjct: 341 NGRIDEASQVFSQLNKRD--------AICWNSMIA-GYCQSGRMSEALNLFRQMPVKNAV 391

Query: 442 A-SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           + + +I  Y++    + A  +F  +   +++ WNS+I G   N L ++A      M Q  
Sbjct: 392 SWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEG 451

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
             P Q +FA  LSSCA L++   G+Q+H  I K GY+ND+FV +ALI MY KCG +  A 
Sbjct: 452 KKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAE 511

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           + F  + G + ++WN +I GYA NGY +EA   ++ M + G  PD++TF+ +L+ACSH+G
Sbjct: 512 KVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAG 571

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           L + GV++F  M     +EP+ +HY+C++D LGR G   EA  ++  M  K +  +W  L
Sbjct: 572 LTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSL 631

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           L++CR+H N+ L K AA  L  L+P N++ Y  L+N+++  GRW+D+  +R LM E    
Sbjct: 632 LAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAG 691

Query: 741 KDPAYS 746
           K P  S
Sbjct: 692 KLPGCS 697



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 129/311 (41%), Gaps = 63/311 (20%)

Query: 20  FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYS----------------------- 56
           + D      +I  Y +      A+ ++++MP+KD+ +                       
Sbjct: 294 YKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQ 353

Query: 57  --------WNAILSAQCKSDDLEFAYKLFDEMP--------------------------- 81
                   WN++++  C+S  +  A  LF +MP                           
Sbjct: 354 LNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIF 413

Query: 82  ----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVE 137
                RNV+SWN+LI+  ++NGL   AL     M  EG  P   T A    +   L  ++
Sbjct: 414 EAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQ 473

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
            G++ H L++K G   +++V+NAL+++YAKCG  + A  VF+++   + +++ +++SG A
Sbjct: 474 VGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYA 533

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDNKFSRNVHG 256
                 EA   F  M  +    D V+   +L  C+  G   +  D+F      F+     
Sbjct: 534 LNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLA 593

Query: 257 QQVHCLTIKLG 267
           +   CL   LG
Sbjct: 594 EHYSCLVDLLG 604



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 31/123 (25%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH  IL++G  +D F+ N LI +Y+KC    SA+ +F  +   D+ SWN+       
Sbjct: 475 GKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNS------- 527

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LIS    NG   +A   + +MS+EG VP  +T   +
Sbjct: 528 ------------------------LISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGM 563

Query: 127 FKA 129
             A
Sbjct: 564 LSA 566


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 202/600 (33%), Positives = 335/600 (55%), Gaps = 27/600 (4%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KN    N ++S Y K G    A  +F+ M E   VT+T ++ G ++ ++  EA E+F  M
Sbjct: 76  KNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQM 135

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
            R     D V+  ++L  C     G          N+ +      QV    IKLG+++ L
Sbjct: 136 QRCGTEPDYVTFVTLLSGCNGHEMG----------NQIT------QVQTQIIKLGYDSRL 179

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN-VMIAGYGQKYQSTKAIELLQRMKS 331
            + N+L+D Y K+  +D A  +F  +PE    ++  V+ A  G        I L Q++ S
Sbjct: 180 IVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIG-----LDDIVLGQQIHS 234

Query: 332 CGFEPDEVTSI---NMLVACVRSGD-IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
              + + V ++   N L+      D +   R++FD MP     S+N ++S Y+    HK 
Sbjct: 235 FVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKY 294

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A  LFRE+QF      +   A +LS  +     E G+Q+HA ++ T +  +  V + L+ 
Sbjct: 295 AFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVD 354

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+KC + E AE +F  +     V W +MI+         E    F +MRQ  +   Q +
Sbjct: 355 MYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQAT 414

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           FA++L + A ++S   G+Q+H+ I K G+++++F GSAL+++Y KCG I  A Q F  M 
Sbjct: 415 FASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP 474

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            +N V+WN MI  YAQNG  +  ++ +K+M+ SG++PD ++F+ +L+ACSHSGLV+ G+ 
Sbjct: 475 DRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLW 534

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            FNSM   + ++P  +HY  ++D L R+G F+EAE L+ EMP   D ++W  +L++CR+H
Sbjct: 535 HFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIH 594

Query: 688 ANVRLAKRAAEELFRLDP-KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            N  LA+RAA++LF ++  +++APY  ++NIY++ G+W+++  V + M +  + K PAYS
Sbjct: 595 KNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYS 654



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 206/445 (46%), Gaps = 59/445 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +   I++ G      + N L++ Y K N    A  LF +MP  D +++ A+L A    DD
Sbjct: 166 VQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDD 225

Query: 70  --------------------------LEF---------AYKLFDEMPERNVVSWNNLISA 94
                                     L+F         A KLFDEMPE++ VS+N +IS 
Sbjct: 226 IVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISG 285

Query: 95  LVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKN 154
              +G  + A  ++ ++    F       A++   ++  LD E GR+ H   I    D  
Sbjct: 286 YAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSE 345

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
           I V N+L+ +YAKCG  + A  +F  ++  + V +TAM+S   +     E L++F  M +
Sbjct: 346 ILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQ 405

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
            +V  D  + +S+L    R    + S               G+Q+H   IK GF +++  
Sbjct: 406 ASVIADQATFASLL----RASASIASLSL------------GKQLHSFIIKSGFMSNVFS 449

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
            ++LLD+YAK G +  A   F  +P+R++VSWN MI+ Y Q  ++   ++  + M   G 
Sbjct: 450 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 509

Query: 335 EPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAI 389
           +PD V+ + +L AC  SG ++ G   F+SM       P    + +++    +S    EA 
Sbjct: 510 QPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAE 569

Query: 390 KLFREMQFRGVKPDRTTLAIILSSC 414
           KL  EM    + PD    + +L++C
Sbjct: 570 KLMAEMP---IDPDEIMWSSVLNAC 591



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 144/561 (25%), Positives = 245/561 (43%), Gaps = 99/561 (17%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           + A I++ G   DT   N  +  + K      A+ LF+KMPHK+  S N ++S   KS +
Sbjct: 34  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 93

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           L  A KLFD M ER  V+W  LI    +    ++A  ++ +M   G  P ++T  ++   
Sbjct: 94  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 153

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
                      +    +IK+G D  + V N L+  Y K      A  +F+EM E +  TF
Sbjct: 154 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTF 213

Query: 190 TAMMS---GL--------------------------------AKTDRVVEALEMFRLMIR 214
            A++    GL                                +K D V++A ++F  M  
Sbjct: 214 AAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPE 273

Query: 215 KAVSIDSVSLSSVLGVCAREGC---------GVESDVFAQSDNKFSRNVH---------- 255
           +    D VS + ++   A +G           ++   F +    F+  +           
Sbjct: 274 Q----DGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEM 329

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+Q+H  TI    ++++ + NSL+DMYAK G  + AE+IF+NL  RS V W  MI+ Y Q
Sbjct: 330 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 389

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------------- 348
           K    + ++L  +M+      D+ T  ++L A                            
Sbjct: 390 KGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS 449

Query: 349 --------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                    + G IK   + F  MP  ++ SWNAM+S+Y+Q+   +  +K F+EM   G+
Sbjct: 450 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 509

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID---NYVASGLIGIYSKCQRNEL 457
           +PD  +   +LS+C+  G++E G   H  S+     +D    + AS ++ +  +  R   
Sbjct: 510 QPDSVSFLGVLSACSHSGLVEEGLW-HFNSMTQIYKLDPRREHYAS-VVDMLCRSGRFNE 567

Query: 458 AERVFHRIP-ELDIVCWNSMI 477
           AE++   +P + D + W+S++
Sbjct: 568 AEKLMAEMPIDPDEIMWSSVL 588



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 182/453 (40%), Gaps = 99/453 (21%)

Query: 328 RMKSCGFEPD------------------------------EVTSINMLVA-CVRSGDIKT 356
           R+   GF+PD                                 S NM+++  V+SG++  
Sbjct: 37  RIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGE 96

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R++FD M   +  +W  ++  YSQ    KEA +LF +MQ  G +PD  T   +LS C  
Sbjct: 97  ARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNG 156

Query: 417 MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD------I 470
             +     QV    +K        V + L+  Y K  R +LA ++F  +PE+D      +
Sbjct: 157 HEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAV 216

Query: 471 VC------------------------WNSMIAGLSLNSLD-----IEAFMFFKQMRQN-- 499
           +C                        WN  ++   L+        I+A   F +M +   
Sbjct: 217 LCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDG 276

Query: 500 ------------------------EMYPTQFS-----FATVLSSCAKLSSSFQGRQVHAQ 530
                                   E+  T F      FAT+LS  +       GRQ+HAQ
Sbjct: 277 VSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQ 336

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
                  ++I VG++L++MY KCG    A   F  +  ++ V W  MI  Y Q G+ +E 
Sbjct: 337 TIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEG 396

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           ++L+  M  + V  D  TF ++L A +    + +G ++ +S  +  G    +   + ++D
Sbjct: 397 LQLFNKMRQASVIADQATFASLLRASASIASLSLGKQL-HSFIIKSGFMSNVFSGSALLD 455

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
              + G   +A     EMP + + V W  ++S+
Sbjct: 456 VYAKCGSIKDAVQTFQEMPDR-NIVSWNAMISA 487



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 152/365 (41%), Gaps = 85/365 (23%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +H+ +++     + F+ N L++ YSK ++   A+ LFD+MP +D  S+N I+S  
Sbjct: 227 VLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGY 286

Query: 65  CKSDDLEFAYKLFDEMP-----------------ERNVVSW------------------- 88
                 ++A+ LF E+                    N + W                   
Sbjct: 287 AWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEI 346

Query: 89  ---NNLISALVRNGLEEKALSVYNKMSNEGFVP--------------------------- 118
              N+L+    + G  E+A  ++  +++   VP                           
Sbjct: 347 LVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQA 406

Query: 119 ----THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
                  T AS+ +AS ++  +  G++ H  +IK G   N++  +ALL +YAKCG  K A
Sbjct: 407 SVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDA 466

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
           V  F+EM + N V++ AM+S  A+       L+ F+ M+   +  DSVS   VL  C+  
Sbjct: 467 VQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHS 526

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
           G  VE  ++                + +T     +       S++DM  ++G  + AE +
Sbjct: 527 GL-VEEGLW--------------HFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKL 571

Query: 295 FSNLP 299
            + +P
Sbjct: 572 MAEMP 576



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 138/340 (40%), Gaps = 56/340 (16%)

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQV-----HAASLKTASHIDNYVASGLIGIYSKCQ 453
           G  PD +     + +    G L   +Q+     H  ++ T   I  YV SG +G      
Sbjct: 42  GFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLG------ 95

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
               A ++F  + E   V W  +I G S  +   EAF  F QM++    P   +F T+LS
Sbjct: 96  ---EARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLS 152

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
            C       Q  QV  QI K GY + + VG+ L++ YCK   +                 
Sbjct: 153 GCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRL----------------- 195

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV--GVEIFNS 631
                         D A +L+K+M     + D  TF A+L  C++ GL D+  G +I + 
Sbjct: 196 --------------DLACQLFKEM----PEIDSFTFAAVL--CANIGLDDIVLGQQIHSF 235

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           +   + V  +      ++D   +     +A  L DEMP + D V + V++S        +
Sbjct: 236 VIKTNFVWNVFVS-NALLDFYSKHDSVIDARKLFDEMP-EQDGVSYNVIISGYAWDGKHK 293

Query: 692 LAKRAAEEL-FRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
            A     EL F    +   P++ + +I S+   W+  R +
Sbjct: 294 YAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQI 333



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 36/219 (16%)

Query: 503 PTQFSFATVLSSCAKLSSSFQG----RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
           P      T L+S A L S          + A+I K G+  D    +  +  + K G++  
Sbjct: 6   PNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQ 65

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS------------------ 600
           ARQ F+ M  KNTV+ N MI GY ++G   EA +L+  M+                    
Sbjct: 66  ARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQF 125

Query: 601 -------------GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
                        G +PD +TFV +L+ C+   + +   ++  +  +  G +  L     
Sbjct: 126 KEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQV-QTQIIKLGYDSRLIVGNT 184

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           ++D   ++     A  L  EMP  D      VL ++  L
Sbjct: 185 LVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGL 223


>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
 gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
          Length = 1026

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 218/764 (28%), Positives = 387/764 (50%), Gaps = 88/764 (11%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           VAG  LHA  L+ G  DD  L + LI +Y+                              
Sbjct: 257 VAGDSLHAFALKGGTIDDESLTSALISMYAA----------------------------- 287

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
              DDL  +  +FD  P +++VS+N++ISA +++   ++A  V+  M   G  P  ITL 
Sbjct: 288 --FDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLV 345

Query: 125 SVFKASTALL-DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           SV  + + LL  + HG   HG++IK+GL + + V +AL+S+Y+K G    +  +F   +E
Sbjct: 346 SVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTE 405

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N + + +M+SG    +    AL+ F  M    V+ D+ ++ +V+  C            
Sbjct: 406 KNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGC------------ 453

Query: 244 AQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                ++++++H  + +H   ++  FE+   + N+LL MYA  GD+ ++  +F  +  R 
Sbjct: 454 -----RYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRM 508

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--------------- 347
           ++SWN MI+G+ +   S  ++ L  +M       D VT I ++ +               
Sbjct: 509 LISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHS 568

Query: 348 ------CV--------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                 C+                G ++ G+++F+S  S +  ++NA++S Y ++   ++
Sbjct: 569 LAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEK 628

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
            + LF +M     KP+  TL  +L  C +      GK +H+ +++  + ++  + +  +G
Sbjct: 629 ILPLFTQMVKNDEKPNLVTLLNLLPVCQSQ---LQGKCIHSYAVRNFTRLETPLFTSAMG 685

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +YS+    E    +F  +   +++ WN+ ++             +FK M    + P + +
Sbjct: 686 MYSRFNNIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVT 745

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              ++S+C++L ++     + A I + G+  +I V +ALI+ + +CG I  AR+ FD   
Sbjct: 746 MLALISACSQLGNADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSV 805

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            K++VTW  MI+ Y+ +G G+ A+ L+  MI SGV PDDITFV+IL+ACSH+GLV+ G  
Sbjct: 806 EKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQGRT 865

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           +F S+Q DHG+ P ++HY CM+D LGR GH  EA  ++  MP      + E LL +CR H
Sbjct: 866 LFKSLQADHGITPRMEHYACMVDLLGRTGHLDEAYDIVRSMPFTPSDNLLESLLGACRFH 925

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
            N ++ +   + L + +   S  Y +L+NIY+S G+W D   +R
Sbjct: 926 GNYKIGESVGKLLIKSEYGKSRSYVMLSNIYASAGKWSDCEQLR 969



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 177/699 (25%), Positives = 317/699 (45%), Gaps = 65/699 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            A+L    K+  ++ + ++FD M  R+++SWN ++S    NG   +A+    +M   G  
Sbjct: 178 TALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMS 237

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   TL  +     +  D   G   H   +K G   +  + +AL+S+YA       +  V
Sbjct: 238 PNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLV 297

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+     + V+F +M+S   +     EA E+FRLM    V  + ++L SVL  C      
Sbjct: 298 FDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSC------ 351

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                   SD  F  N HG+ VH + IKLG    + + ++L+ MY+K G +DS+ ++F  
Sbjct: 352 --------SDLLFGIN-HGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCC 402

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
             E++ + WN MI+GY    +   A++   +M+  G  PD  T IN++  C         
Sbjct: 403 FTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVA 462

Query: 349 -------VRS-------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                  VR+                   GDI T   +F  M    + SWN M+S +++ 
Sbjct: 463 KSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEI 522

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
            + + ++ LF +M    V  D  TL  ++SS +       G+ VH+ ++K+    D  + 
Sbjct: 523 GDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLT 582

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + LI +Y+ C   E  +++F+     + + +N++++G   N++  +    F QM +N+  
Sbjct: 583 NALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEK 642

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +   +L  C    S  QG+ +H+   ++    +  + ++ + MY +  +I   R  
Sbjct: 643 PNLVTLLNLLPVC---QSQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTI 699

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F ++  +N + WN  +    Q    D  V  +K M+   V+PD++T +A+++ACS  G  
Sbjct: 700 FSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNA 759

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D    I  ++ L  G    +     +ID   R G    A  L D    + D V W  +++
Sbjct: 760 DFAACIM-AVILQKGFSMNILVLNALIDTHSRCGSISFARELFDS-SVEKDSVTWGAMIN 817

Query: 683 SCRLHANVRLAKRAAEELFRL------DPKNSAPYSLLA 715
           +  +H N      AA +LF +      DP +    S+L+
Sbjct: 818 AYSMHGN----GEAALDLFSMMIDSGVDPDDITFVSILS 852



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 162/645 (25%), Positives = 286/645 (44%), Gaps = 87/645 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKM--PHKDIYSWNAILSAQCKS 67
           +HA +   G   D F+   L+E Y       SA  LF +       +YS N ++  +C S
Sbjct: 60  IHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLNLVV--RCFS 117

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D                             +G   + L +Y  +   GF   + T   V 
Sbjct: 118 D-----------------------------HGFHRELLDLYRGLC--GFGSDNFTFPPVI 146

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           +A TA   ++ GR+ H  V++ G   N+ V  ALL +YAK G    +  VF+ M   + +
Sbjct: 147 RACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLI 206

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++ AM+SG +      EA+E  + M +  +S ++ +L  ++G+C   G            
Sbjct: 207 SWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAG------------ 254

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                 V G  +H   +K G   D  L+++L+ MYA   D+ S+ ++F   P + +VS+N
Sbjct: 255 ----DRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFN 310

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------VRSGD------IK 355
            MI+ Y Q     +A E+ + M   G  P+ +T +++L +C      +  G+      IK
Sbjct: 311 SMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIK 370

Query: 356 TGREMFDSMPSPSVSS------------------------WNAMLSSYSQSENHKEAIKL 391
            G     S+ S  VS                         WN+M+S Y  +     A+  
Sbjct: 371 LGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDA 430

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +MQ  GV PD TT+  ++S C     L   K +HA +++        V + L+ +Y+ 
Sbjct: 431 FCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYAD 490

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     +  +F ++    ++ WN+MI+G +       +   F QM   E++    +   +
Sbjct: 491 CGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGL 550

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           +SS +    +  G  VH+   K G ++D+ + +ALI MY  CG +   +Q F+    +NT
Sbjct: 551 ISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNT 610

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
           +T+N ++ GY +N   ++ + L+  M+ +  KP+ +T + +L  C
Sbjct: 611 ITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVC 655



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 217/466 (46%), Gaps = 38/466 (8%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+QVHC  ++ G  +++ +  +LLDMYAK G +D +  +F  +  R ++SWN M++GY  
Sbjct: 158 GRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSV 217

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG----------------------- 352
                +A+E LQ M+ CG  P+  T + ++  C  +G                       
Sbjct: 218 NGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESL 277

Query: 353 ------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                       D+ + R +FD  P   + S+N+M+S+Y Q  N KEA ++FR M   GV
Sbjct: 278 TSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGV 337

Query: 401 KPDRTTLAIILSSCAAMGI-LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
            P+  TL  +L SC+ +   +  G+ VH   +K        V S L+ +YSK  + + + 
Sbjct: 338 GPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSS 397

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            +F    E + + WNSMI+G  +N+    A   F +M+   + P   +   V+S C    
Sbjct: 398 LLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTK 457

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
                + +HA   ++ + +   V +AL+ MY  CGDI  +   F  M  +  ++WN MI 
Sbjct: 458 DLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMIS 517

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G+A+ G  + ++ L+  M    V  D +T + ++++ S S    VG E  +S+ +  G  
Sbjct: 518 GFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVG-ESVHSLAIKSGCI 576

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
             +     +I      G     + L +   C  + + +  L+S  R
Sbjct: 577 SDVSLTNALITMYANCGIVEAGQQLFNSF-CSRNTITYNALMSGYR 621



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 194/461 (42%), Gaps = 86/461 (18%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           K  HVA K +HA+ +RN       + N L+ +Y+ C +  ++  LF KM  + + SWN +
Sbjct: 457 KDLHVA-KSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTM 515

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +S   +  D E +  LF +M    V  W +L+                          T 
Sbjct: 516 ISGFAEIGDSETSLTLFCQMFHEEV--WFDLV--------------------------TL 547

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           I L S    S    D   G   H L IK G   ++ + NAL+++YA CG  +    +F  
Sbjct: 548 IGLISSLSVSE---DAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNS 604

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
               N +T+ A+MSG  K +   + L +F  M++     + V+L ++L VC  +      
Sbjct: 605 FCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVCQSQ------ 658

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                        + G+ +H   ++     +  L  S + MY++  +++    IFS +  
Sbjct: 659 -------------LQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVSA 705

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------ 348
           R+++ WN  ++   Q  Q+   ++  + M      PDEVT + ++ AC            
Sbjct: 706 RNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFAACI 765

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   R G I   RE+FDS       +W AM+++YS   N 
Sbjct: 766 MAVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINAYSMHGNG 825

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           + A+ LF  M   GV PD  T   ILS+C+  G++E G+ +
Sbjct: 826 EAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTL 866



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 132/251 (52%), Gaps = 2/251 (0%)

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           P+V S N ++  +S    H+E + L+R +   G   D  T   ++ +C A   L+ G+QV
Sbjct: 104 PAVYSLNLVVRCFSDHGFHRELLDLYRGLC--GFGSDNFTFPPVIRACTAASCLQLGRQV 161

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H   L+T    +  V + L+ +Y+K  + +++ RVF  +   D++ WN+M++G S+N   
Sbjct: 162 HCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCF 221

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
            EA    ++M+Q  M P   +   ++  C        G  +HA   K G ++D  + SAL
Sbjct: 222 REAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSAL 281

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           I MY    D+  +R  FD+   K+ V++N MI  Y Q+    EA  +++ M  +GV P+ 
Sbjct: 282 ISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNL 341

Query: 607 ITFVAILTACS 617
           IT V++L +CS
Sbjct: 342 ITLVSVLPSCS 352



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 128/300 (42%), Gaps = 50/300 (16%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           ++ + GK +H++ +RN    +T L    + +YS+ NN    + +F  +  +++  WNA L
Sbjct: 656 QSQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVSARNLIVWNAFL 715

Query: 62  SA--QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           SA  QCK  D+   Y  F  M   NV                                P 
Sbjct: 716 SACVQCKQADMVVDY--FKHMLFLNV-------------------------------RPD 742

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
            +T+ ++  A + L + +       ++++ G   NI V NAL+  +++CG    A  +F+
Sbjct: 743 EVTMLALISACSQLGNADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSISFARELFD 802

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
              E + VT+ AM++  +       AL++F +MI   V  D ++  S+L  C+  G   +
Sbjct: 803 SSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQ 862

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                +S          Q  H +T ++   A       ++D+  + G +D A  I  ++P
Sbjct: 863 GRTLFKSL---------QADHGITPRMEHYA------CMVDLLGRTGHLDEAYDIVRSMP 907


>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
 gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
 gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  355 bits (911), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 205/649 (31%), Positives = 338/649 (52%), Gaps = 55/649 (8%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           +++  R+ HG++   GL  +I +A  L+SLY   G+TK A  VF+++ EP+   +  M+ 
Sbjct: 56  NIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLR 115

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
                   VE ++++ L+++     D +  S  L  C               DN      
Sbjct: 116 CYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE---------LQDLDN------ 160

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+++HC  +K+    ++ L+  LLDMYAK G++ SA  +F+++  R+VV W  MIAGY 
Sbjct: 161 -GKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYV 218

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------------------- 348
           +     + + L  RM+      +E T   +++AC                          
Sbjct: 219 KNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC 278

Query: 349 ---------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                    V+ GDI   R +F+      +  W AM+  Y+ + +  EA+ LF++M+   
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           +KP+  T+A +LS C  +  LE G+ VH  S+K     D  VA+ L+ +Y+KC +N  A+
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAK 397

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            VF    E DIV WNS+I+G S N    EA   F +M    + P   + A++ S+CA L 
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457

Query: 520 SSFQGRQVHAQIEKDGYV--NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           S   G  +HA   K G++  + + VG+AL++ Y KCGD   AR  FD +  KNT+TW+ M
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 517

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I GY + G    ++ L+++M+    KP++ TF +IL+AC H+G+V+ G + F+SM  D+ 
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 577

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
             P   HYTCM+D L RAG   +A  +I++MP + D   +   L  C +H+   L +   
Sbjct: 578 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 637

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +++  L P +++ Y L++N+Y+S GRW+  + VR LM +  + K   +S
Sbjct: 638 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 166/675 (24%), Positives = 291/675 (43%), Gaps = 90/675 (13%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           H  +  NGL  D  +  +L+ LY     T  A+ +FD++P  D Y W  +L   C + + 
Sbjct: 64  HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
               KL+D + +                                GF    I  +   KA 
Sbjct: 124 VEVVKLYDLLMKH-------------------------------GFRYDDIVFSKALKAC 152

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
           T L D+++G++ H  ++K+    N+ V   LL +YAKCG  K A  VF +++  N V +T
Sbjct: 153 TELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWT 211

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           +M++G  K D   E L +F  M    V  +  +  +++  C                 K 
Sbjct: 212 SMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACT----------------KL 255

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
           S    G+  H   +K G E    L  SLLDMY K GD+ +A  +F+      +V W  MI
Sbjct: 256 SALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMI 315

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----------- 359
            GY       +A+ L Q+MK    +P+ VT  ++L  C    +++ GR            
Sbjct: 316 VGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW 375

Query: 360 -----------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                  +F+      + +WN+++S +SQ+ +  EA+ LF  M 
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA--SHIDNYVASGLIGIYSKCQR 454
              V P+  T+A + S+CA++G L  G  +HA S+K    +    +V + L+  Y+KC  
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A  +F  I E + + W++MI G       I +   F++M + +  P + +F ++LS+
Sbjct: 496 PQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555

Query: 515 CAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV- 572
           C       +G++  + + KD  +       + +++M  + G++  A    + M  +  V 
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVR 615

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS-GLVDVGVEIFNS 631
            +   +HG   +   D    + K M+   + PDD ++  +++    S G  +   E+ N 
Sbjct: 616 CFGAFLHGCGMHSRFDLGEIVIKKML--DLHPDDASYYVLVSNLYASDGRWNQAKEVRNL 673

Query: 632 MQLDHGVEPILDHYT 646
           M+   G+  I  H T
Sbjct: 674 MK-QRGLSKIAGHST 687



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 211/428 (49%), Gaps = 60/428 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  H  ++++G+   + L   L+++Y KC +  +A+ +F++  H D+  W A       
Sbjct: 261 GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTA------- 313

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I     NG   +ALS++ KM      P  +T+ASV
Sbjct: 314 ------------------------MIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASV 349

Query: 127 FKASTALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                 + ++E GR  HGL IK+G+ D N  VANAL+ +YAKC   + A  VFE  SE +
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKD 407

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V + +++SG ++   + EAL +F  M  ++V+ + V+++S+   CA  G          
Sbjct: 408 IVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG---------- 457

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEA--DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                S  V G  +H  ++KLGF A   +H+  +LLD YAK GD  SA +IF  + E++ 
Sbjct: 458 -----SLAV-GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           ++W+ MI GYG++  +  ++EL + M     +P+E T  ++L AC  +G +  G++ F S
Sbjct: 512 ITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSS 571

Query: 364 MP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           M      +PS   +  M+   +++   ++A+ +  +M    ++PD       L  C    
Sbjct: 572 MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP---IQPDVRCFGAFLHGCGMHS 628

Query: 419 ILESGKQV 426
             + G+ V
Sbjct: 629 RFDLGEIV 636


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 206/666 (30%), Positives = 340/666 (51%), Gaps = 53/666 (7%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P H +   +    T   D++ G+  H  +++ G   ++Y+ N+L++LYAKCG    A  V
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEA--LEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           FE ++  + V++  +++G ++   V  +  +E+F+ M  +    +  + S V    +   
Sbjct: 68  FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS--- 124

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                     S   F     G Q H L IK     D+ + +SL++MY K G M  A  +F
Sbjct: 125 ---------SSPETFG----GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVF 171

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
             +PER+ VSW  +I+GY  +  + +A EL   M+      D+    ++L A      + 
Sbjct: 172 DTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVH 231

Query: 356 TGREMF-----------------------------DSMPSPSVS------SWNAMLSSYS 380
            G+++                              D++ +  +S      +W+AM++ Y+
Sbjct: 232 YGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYA 291

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           Q+ +  EA+ LF  M   G KP   T   ++++C+ +G LE GKQ+H  SLK       Y
Sbjct: 292 QAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIY 351

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
             + L+ +Y+KC     A + F  + E DIV W SMI+G + N  +  A   + +M+   
Sbjct: 352 FMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMER 411

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           + P + + A+VL +C+ L++  QG+Q+HAQ  K G+  ++ +GSAL  MY KCG +    
Sbjct: 412 IMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGN 471

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
             F  M  ++ +TWN MI G +QNG G +A+ L++++     KPD +TFV +L+ACSH G
Sbjct: 472 LVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMG 531

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           LV+ G   F  M  + G+ P ++HY CM+D L RAG  HE +  I+         +W +L
Sbjct: 532 LVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRIL 591

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           L +CR + N  L   A E+L  L  + S+ Y LL++IY++LGR DD+  VR LM    + 
Sbjct: 592 LGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVN 651

Query: 741 KDPAYS 746
           K+P  S
Sbjct: 652 KEPGCS 657



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 159/596 (26%), Positives = 282/596 (47%), Gaps = 85/596 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA +LR G F   +L N L+ LY+KC +   A+ +F+ + +KD             
Sbjct: 29  GKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD------------- 75

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKA--LSVYNKMSNEGFVPTHITLA 124
                             VVSWN LI+   + G    +  + ++ +M  E  +P   T +
Sbjct: 76  ------------------VVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFS 117

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            VF A+++  +   G + H L IK     +++V ++L+++Y K G    A  VF+ + E 
Sbjct: 118 GVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPER 177

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++  ++SG A      EA E+F LM R+  + D    +SVL         V   V  
Sbjct: 178 NTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALT-----VPDLVH- 231

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                     +G+Q+HCL +K G  +   + N+L+ MY K G +D A   F    ++  +
Sbjct: 232 ----------YGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDI 281

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           +W+ MI GY Q   S +A+ L   M   G +P E T + ++ AC   G ++ G+++    
Sbjct: 282 TWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYS 341

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          FD +  P +  W +M+S Y+Q+  ++ A+
Sbjct: 342 LKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETAL 401

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            L+  MQ   + P   T+A +L +C+++  LE GKQ+HA ++K    ++  + S L  +Y
Sbjct: 402 TLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMY 461

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC   E    VF R+P  DI+ WN+MI+GLS N   ++A   F+++R     P   +F 
Sbjct: 462 AKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFV 521

Query: 510 TVLSSCAKLSSSFQGR-QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            VLS+C+ +    +G+      +++ G V  +   + ++++  + G ++  ++F +
Sbjct: 522 NVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIE 577


>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
          Length = 992

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 220/778 (28%), Positives = 387/778 (49%), Gaps = 87/778 (11%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG  LHA  L++G+  D  L    I +Y+   +  S+  LF +                 
Sbjct: 261 AGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQ----------------- 303

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                     L D     N+VS N++IS  +++G  EKA  V+  M  +G VP  +T+ S
Sbjct: 304 ---------SLVD-----NLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVS 349

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +    +    + HG   HG+VIK GL + + V +AL+S+Y+K G    AV +F  ++E +
Sbjct: 350 ILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKS 409

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           ++ + +++SG    ++    +   R M  + V  D++++ SV+  C              
Sbjct: 410 QLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKC-------------- 455

Query: 246 SDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
              + + ++H G+ +H   ++   E +  + N+LL MYA  G +     +F  +  R+++
Sbjct: 456 ---RHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLI 512

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----------------C 348
           SWN +I+G+ +   S   +    +M+    + D VT I ++ +                 
Sbjct: 513 SWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLA 572

Query: 349 VRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
           +RSG                    I+ G ++FDS+ S +  S+NA+++ Y ++   +E +
Sbjct: 573 IRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEIL 632

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF  M     KP+  TL  +L  C +      GK VH+ +++  S ++  + +  I +Y
Sbjct: 633 PLFYHMIKNDQKPNIITLLNLLPICHSQ---LQGKTVHSYAIRNFSKLETSLFTSAICMY 689

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           S+    E    +F  + E + + WN++++          AF +F+Q++   +     +  
Sbjct: 690 SRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTML 749

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
            ++S+C++L  +     V A   + G+   I V +ALI+M+ +CG I  AR+ FD+   K
Sbjct: 750 ALISACSQLGKADLAECVTAIALQKGFDGTIIVLNALIDMHSRCGSISFARKIFDISMEK 809

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           ++V+W+ MI+ Y+ +G G  A+ L+  M++SG+KPDDITFV++L+ACS SG ++ G  +F
Sbjct: 810 DSVSWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDITFVSVLSACSRSGFLEQGRTLF 869

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
            SM  DHG+ P ++HY CM+D LGR GH  EA  ++  MP +    + E LL +CR H N
Sbjct: 870 RSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGN 929

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            +L +   + L   D  N   Y +L+NIY+S G+W D   +R  M    ++KD   SL
Sbjct: 930 SKLGESVGKILTESDHGNPRSYVMLSNIYASAGKWSDYERLRSDMEAKGLIKDVGVSL 987



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 158/667 (23%), Positives = 316/667 (47%), Gaps = 56/667 (8%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            A+L    KS  ++ + ++FD M  R+++SWN +IS    NG   +A     +M  +GF 
Sbjct: 181 TALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFR 240

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   +L  +    + L   + G   H   +K G+  +  +  A +S+YA  G    ++ +
Sbjct: 241 PNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSL 300

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F +    N V+  +M+S   +     +A  +FRLM  K +  + V++ S+L  C+     
Sbjct: 301 FHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCS----- 355

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                     N F  N HG+ VH + IK G    + + ++L+ MY+K GD+DSA  +FS+
Sbjct: 356 ----------NFFGIN-HGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSS 404

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           + E+S + WN +I+GY    +    +  ++RM+  G +PD +T I+++  C  + D+  G
Sbjct: 405 VTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVG 464

Query: 358 R-----------------------------------EMFDSMPSPSVSSWNAMLSSYSQS 382
           +                                   ++F +M   ++ SWN ++S ++++
Sbjct: 465 KSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAEN 524

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
            +    ++ F +M+   ++ D  TL  ++SS +A+  +  G+ VH+ ++++  ++D  VA
Sbjct: 525 GDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVA 584

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + LI +Y+ C   +  E++F  +  ++ + +N+++ G   N+L  E    F  M +N+  
Sbjct: 585 NALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMIKNDQK 644

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +   +L  C    S  QG+ VH+   ++    +  + ++ I MY +  ++      
Sbjct: 645 PNIITLLNLLPIC---HSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNL 701

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F ++  +N + WN ++    Q      A   ++ +    VK D +T +A+++ACS  G  
Sbjct: 702 FCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKA 761

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D+  E   ++ L  G +  +     +ID   R G    A  + D +  + D V W  +++
Sbjct: 762 DLA-ECVTAIALQKGFDGTIIVLNALIDMHSRCGSISFARKIFD-ISMEKDSVSWSTMIN 819

Query: 683 SCRLHAN 689
           +  +H +
Sbjct: 820 AYSMHGD 826



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 162/664 (24%), Positives = 288/664 (43%), Gaps = 59/664 (8%)

Query: 98  NGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYV 157
           +G   + L +Y ++    F   + T   V +A  A+  +  G+  H  V++ G   N+ V
Sbjct: 122 HGFHRELLGLYREVC--AFGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGV 179

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
             ALL +YAK G    +  VF+ M   + +++ AM+SG +    ++EA E  + M +   
Sbjct: 180 QTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGF 239

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
             ++ SL  ++ + +  G GV                 G  +H   +K G   D  L+ +
Sbjct: 240 RPNASSLVGIVSMVS--GLGVRDA--------------GDPLHAFALKSGVLGDESLTPA 283

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
            + MYA  G + S+  +F      ++VS N MI+   Q     KA  + + M+  G  P+
Sbjct: 284 FISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPN 343

Query: 338 EVTSINMLVAC-----------------------------------VRSGDIKTGREMFD 362
            VT +++L  C                                    + GD+ +   +F 
Sbjct: 344 LVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFS 403

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
           S+   S   WN+++S Y  +      +   R MQ  GV PD  T+  ++S C     L  
Sbjct: 404 SVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHV 463

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           GK +HA ++++   ++  V + L+ +Y+ C +  +  ++FH +    ++ WN++I+G + 
Sbjct: 464 GKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAE 523

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           N   +    FF QMR  +M     +   ++SS + +     G  VH+   + G   D+ V
Sbjct: 524 NGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSV 583

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            +ALI MY  CG I    + FD +   NT+++N ++ GY +N   +E + L+  MI +  
Sbjct: 584 ANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMIKNDQ 643

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
           KP+ IT + +L  C HS L    V  +           +     CM        + H   
Sbjct: 644 KPNIITLLNLLPIC-HSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLF 702

Query: 663 MLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL-LANIYSSL 721
            L+ E     + ++W  +LS+C       +A     ++  L+ K  A   L L +  S L
Sbjct: 703 CLVGE----RNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQL 758

Query: 722 GRWD 725
           G+ D
Sbjct: 759 GKAD 762



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 150/314 (47%), Gaps = 4/314 (1%)

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
           V   N  +  +S    H+E + L+RE+   G   D  T   ++ +CAA+  L  GK+VH 
Sbjct: 109 VYDLNIAVRCFSDHGFHRELLGLYREVCAFG--SDNFTFPPVIRACAAVSCLRLGKEVHC 166

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
             ++T    +  V + L+ +Y+K  + +L+ RVF  +   D++ WN+MI+G SLN   +E
Sbjct: 167 RVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLE 226

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIE 548
           A    KQM+Q+   P   S   ++S  + L     G  +HA   K G + D  +  A I 
Sbjct: 227 AAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFIS 286

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           MY   G +  +   F      N V+ N MI    Q+G  ++A  +++ M   G+ P+ +T
Sbjct: 287 MYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVT 346

Query: 609 FVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
            V+IL  CS+   ++ G E  + M +  G+   +   + ++    + G    A  L   +
Sbjct: 347 VVSILPCCSNFFGINHG-ESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSV 405

Query: 669 PCKDDPVIWEVLLS 682
             K   ++W  L+S
Sbjct: 406 TEKSQ-LLWNSLIS 418



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 130/301 (43%), Gaps = 50/301 (16%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           + + GK +H++ +RN    +T L    I +YS+ NN     +LF  +  ++   WNAILS
Sbjct: 659 SQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILS 718

Query: 63  A--QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           A  QCK   + F Y  F ++   NV +                                 
Sbjct: 719 ACVQCKQAGVAFDY--FRQIQFLNVKT-------------------------------DA 745

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           +T+ ++  A + L   +       + ++ G D  I V NAL+ ++++CG    A  +F+ 
Sbjct: 746 VTMLALISACSQLGKADLAECVTAIALQKGFDGTIIVLNALIDMHSRCGSISFARKIFDI 805

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
             E + V+++ M++  +       AL++F +M+   +  D ++  SVL  C+R G     
Sbjct: 806 SMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDITFVSVLSACSRSG----- 860

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
             F +      R++     H +T ++   A       ++D+  + G +D A  I + +P 
Sbjct: 861 --FLEQGRTLFRSMLAD--HGITPRMEHYA------CMVDLLGRTGHLDEAYDIVTTMPF 910

Query: 301 R 301
           R
Sbjct: 911 R 911


>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
          Length = 773

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 238/794 (29%), Positives = 384/794 (48%), Gaps = 115/794 (14%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL-SAQCKSD 68
           +HA  + +GL+    L  +L+  YS       A   F   P  D + WN+++ +  C SD
Sbjct: 32  VHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASD 91

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
            +                                 ALS + +M   G  P+  T      
Sbjct: 92  FV--------------------------------AALSAHRRMLASGARPSPFTAPLAAS 119

Query: 129 ASTALLDVEHGRRCHGLVIKIGL----DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           AS  L  +  G   H   ++ GL      ++ VA++L+ +YA+CG  + AV VFEEM E 
Sbjct: 120 ASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFEEMPER 179

Query: 185 NEVTFTAMMSGLAKTDRVVEAL----EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           + V +TA++SG  +     E L    EM RL    +V  +S ++ S L     E CGV  
Sbjct: 180 DVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGL-----EACGVLD 234

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           ++ +           G+ +H   +K+G      + ++L  MY+K    + A  +F  LPE
Sbjct: 235 ELNS-----------GRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPE 283

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG-----DIK 355
           + VVSW  +I  Y ++   T+A+EL Q+M   G +PDE+     LV+CV SG     ++ 
Sbjct: 284 KDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEI-----LVSCVLSGLGNNGNVH 338

Query: 356 TGR----------------------------EMFDS-------MPSPSVSSWNAMLSSYS 380
            G+                            EM DS       +      SWN M+  Y 
Sbjct: 339 GGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYC 398

Query: 381 QSENHKEAIKLFREMQFRGVKPDR-------TTLAIILSSCAAMGILESGKQVHAASLKT 433
           ++    + ++L+REMQ R    D+        +L   +SSC+ +  L  G+  H  S+K 
Sbjct: 399 KAGCDVKCLELYREMQLR----DKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKH 454

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMF 492
               D+ VA+ LIG+Y +C + + A ++F     + D+V WN++I+  +       A   
Sbjct: 455 LLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSL 514

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           + QM    + P   +  TV+S+CA L +  +G ++H+ +++ G+  D+ + +ALI+MY K
Sbjct: 515 YDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAK 574

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           CG +  AR+ FD M   + V WN MI GY  +G   +A+ L+  M    +KP+ +TF+AI
Sbjct: 575 CGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAI 634

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L+A  HSGL++ G ++F  M   + +EP L HY CM+D LG++GH  EAE ++  MP + 
Sbjct: 635 LSALCHSGLLEEGRKVFTRMG-KYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEP 693

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
           D  IW  LLS+C+LH N  +  R A++ F  DP+N   Y L++N Y    +WD++  +RE
Sbjct: 694 DGGIWGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILISNSYGGAKKWDEIEKLRE 753

Query: 733 LMSENCIVKDPAYS 746
            M    + K   +S
Sbjct: 754 TMKNLGVQKGVGWS 767



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 147/575 (25%), Positives = 263/575 (45%), Gaps = 96/575 (16%)

Query: 7   GKLLHAHILRNGLF----DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           G  +HA+ +R GL     D   + + L+ +Y++C N   A  +F++MP +D+ +W A+  
Sbjct: 130 GAAVHAYCVRYGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAV-- 187

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM---SNEGFV-P 118
                                        IS  VRNG   + L    +M   + +G V P
Sbjct: 188 -----------------------------ISGCVRNGESGEGLRYLVEMVRLAGDGSVRP 218

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
              T+ S  +A   L ++  GR  HG V+K+G+  +  V +AL S+Y+KC  T+ A  +F
Sbjct: 219 NSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALF 278

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            E+ E + V++T+++    +   + EA+E+F+ M+   +  D + +S VL      G   
Sbjct: 279 LELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNG--- 335

Query: 239 ESDVFAQSDNKFSRNVHGQQV-HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                         NVHG +  H +  K  F   + + N+L+ MY K   +DSA  +F  
Sbjct: 336 --------------NVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRL 381

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK---SCGFEPDEVTSINMLVACVRSGDI 354
           L +R   SWN+M+ GY +     K +EL + M+      F     + ++ + +C R  ++
Sbjct: 382 LHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAEL 441

Query: 355 KTGRE--------MFDSMPSPS----------------------------VSSWNAMLSS 378
           + GR         + D   S +                            V +WN ++SS
Sbjct: 442 RLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISS 501

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           Y+   +   A+ L+ +M   G+ P+ TTL  ++S+CA +  LE G+++H+   +     D
Sbjct: 502 YAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYD 561

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
             + + LI +Y+KC +  +A R+F  + + D+V WN MI+G  ++    +A   F +M  
Sbjct: 562 VSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEG 621

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
             + P   +F  +LS+        +GR+V  ++ K
Sbjct: 622 GSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGK 656



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 196/476 (41%), Gaps = 55/476 (11%)

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           +VH L +  G      L+  L+  Y+  G    A + FS  P      WN +I  +    
Sbjct: 31  RVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCAS 90

Query: 318 QSTKAIELLQRMKSCGFEPDEVTS-------------------------INMLVA----- 347
               A+   +RM + G  P   T+                           +LV      
Sbjct: 91  DFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSV 150

Query: 348 ---------CVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM-QF 397
                      R G+++   ++F+ MP   V +W A++S   ++    E ++   EM + 
Sbjct: 151 AVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRL 210

Query: 398 RG---VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
            G   V+P+  T+   L +C  +  L SG+ +H   +K        V S L  +YSKC  
Sbjct: 211 AGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYS 270

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E A  +F  +PE D+V W S+I       L  EA   F+QM ++ + P +   + VLS 
Sbjct: 271 TEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSG 330

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
                +   G+  HA I K  + + + +G+ALI MY K   +  A + F ++H ++  +W
Sbjct: 331 LGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSW 390

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF-------VAILTACSHSGLVDVGVE 627
           N M+ GY + G   + + LY++M       D   F       V+ +++CS    + +G  
Sbjct: 391 NLMVVGYCKAGCDVKCLELYREMQLR----DKYEFWCVADSLVSAISSCSRLAELRLGRS 446

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             +   + H ++        +I   GR G F  A  +      K D V W  L+SS
Sbjct: 447 A-HCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISS 501



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 4/116 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+++   G   D  +   LI++Y+KC     A+ +FD M   D+ +WN ++S    
Sbjct: 546 GEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGM 605

Query: 67  SDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
             + + A +LF +M     + N V++  ++SAL  +GL E+   V+ +M      P
Sbjct: 606 HGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGKYSLEP 661


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 216/701 (30%), Positives = 361/701 (51%), Gaps = 57/701 (8%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +DI+  NA++SA  K   +  A K+F  +   NVVS+  LIS   ++  E++A+ ++  M
Sbjct: 128 EDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAM 187

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
            + G  P   T  ++  A    +D + G + HG+V+K+GL   +++ NAL+ LY KCG+ 
Sbjct: 188 LDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFL 247

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGV 230
              + +FEEM E +  ++  ++S L K  +  EA + FR M + K + +D  SLS++L  
Sbjct: 248 DLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTA 307

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CA                   + + GQQ+H L +K+G E+ L +S+SL+  Y K G  + 
Sbjct: 308 CAGS----------------VKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSAND 351

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
              +F  +P R V++W  MI  Y                                   + 
Sbjct: 352 VTDLFETMPIRDVITWTGMITSY-----------------------------------ME 376

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
            G + +  E+F+ MP  +  S+NA+L+  S++++   A++LF EM   GV+    TL  I
Sbjct: 377 FGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSI 436

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH-RIPELD 469
           +++C  +   +  +Q+    +K     ++ + + L+ +Y++C R E AE++F+ R  E D
Sbjct: 437 ITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEND 496

Query: 470 IVC-WNSMIAGLSLNSLDIEAF-MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
                 SMI G + N    EA  +F     +  +   +    ++LS C  +     G Q+
Sbjct: 497 YTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQM 556

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H    K G + +  VG+A + MY KC ++  A + F+ M+ ++ V+WN ++ G+  +  G
Sbjct: 557 HCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQG 616

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHS--GLVDVGVEIFNSMQLDHGVEPILDHY 645
           D+A+ ++K M  +G+KPD ITF  I++A  H+   LVD    +F SM+ +H ++P L+HY
Sbjct: 617 DKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHY 676

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
              I  LGR G   EAE  I  MP + D  +W  LL+SCR++ N RL K AA  +  ++P
Sbjct: 677 ASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEP 736

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           K+   Y L +N+YS+ GRW     VRE M E    K P+ S
Sbjct: 737 KDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQS 777



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 243/483 (50%), Gaps = 48/483 (9%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA  L+ GL     + + LI  Y+KC + +    LF+ MP +D+ +W  ++++  +
Sbjct: 317 GQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYME 376

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A ++F++MP+RN +S+N +++ L RN    +AL ++ +M  EG   +  TL S+
Sbjct: 377 FGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSI 436

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L   +  ++  G V+K G+  N  +  AL+ +Y +CG  + A  +F + S  N+
Sbjct: 437 ITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEND 496

Query: 187 VT--FTAMMSGLAKTDRVVEALEMFRL-MIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            T   T+M+ G A+  ++ EA+ +F       A+ +D V  +S+L +C   G       F
Sbjct: 497 YTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIG-------F 549

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
            +          G Q+HC  +K G   +  + N+ + MY+K  +MD A  +F+ +  + +
Sbjct: 550 HE---------MGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDI 600

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD---IKTGREM 360
           VSWN ++AG+   +Q  KA+ + ++M+  G +PD +T   ++++  +  +   + + R +
Sbjct: 601 VSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSIT-FALIISAYKHTELNLVDSCRSL 659

Query: 361 FDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC- 414
           F SM +     P++  + + +S   +    +EA +  R M    ++PD      +L+SC 
Sbjct: 660 FVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMP---LEPDVYVWRALLNSCR 716

Query: 415 ----------AAMGILE-SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
                     AA  IL    K   +  LK+    + Y ASG    YS+  R ++ E+ F 
Sbjct: 717 INKNERLEKLAARNILAVEPKDPLSYILKS----NLYSASGR-WYYSEKVREDMREKGFR 771

Query: 464 RIP 466
           + P
Sbjct: 772 KHP 774



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 213/452 (47%), Gaps = 77/452 (17%)

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D   +R VH Q        L  E D+ L N+L+  Y K G +  A+ +FS L   +VVS+
Sbjct: 112 DPDLARAVHAQ-------FLKLEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSY 164

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------- 359
             +I+G+ +     +A+EL   M   G EP+E T + +L AC+R+ D + G +       
Sbjct: 165 TALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVK 224

Query: 360 ----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +F+ MP   ++SWN ++SS  +   + EA   
Sbjct: 225 LGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDY 284

Query: 392 FREMQF-RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           FR MQ  +G+K D  +L+ +L++CA       G+Q+HA +LK        V+S LIG Y+
Sbjct: 285 FRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYT 344

Query: 451 KC-QRNEL------------------------------AERVFHRIPELDIVCWNSMIAG 479
           KC   N++                              A  VF+++P+ + + +N+++AG
Sbjct: 345 KCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAG 404

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
           LS N     A   F +M +  +  +  +  +++++C  L S    +Q+   + K G +++
Sbjct: 405 LSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSN 464

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKN--TVTWNEMIHGYAQNGYGDEAVRLYKDM 597
             + +AL++MY +CG +  A + F     +N  T     MI GYA+NG  +EA+ L+   
Sbjct: 465 SCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSG 524

Query: 598 IASG-VKPDDITFVAILTACSHSGLVDVGVEI 628
            + G +  D++   +IL+ C   G  ++G+++
Sbjct: 525 QSEGAIVMDEVMSTSILSLCGSIGFHEMGMQM 556



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 130/552 (23%), Positives = 236/552 (42%), Gaps = 123/552 (22%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +++ GL    F+CN L+ LY KC        LF++MP +DI SWN ++S+  K
Sbjct: 215 GSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVK 274

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITLAS 125
               EF Y                           ++A   +  M   +G    H +L++
Sbjct: 275 ----EFKY---------------------------DEAFDYFRGMQLCKGLKVDHFSLST 303

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------------- 169
           +  A    +    G++ H L +K+GL+ ++ V+++L+  Y KCG                
Sbjct: 304 LLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRD 363

Query: 170 ---WT------------KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              WT              AV VF +M + N +++ A+++GL++ D    ALE+F  M+ 
Sbjct: 364 VITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLE 423

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
           + V I   +L+S++       CG+    F  S          QQ+    +K G  ++  +
Sbjct: 424 EGVEISDCTLTSII-----TACGLLKS-FKVS----------QQIQGFVMKFGILSNSCI 467

Query: 275 SNSLLDMYAKNGDMDSAEVIF--SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
             +L+DMY + G M+ AE IF   +L          MI GY +  +  +AI L    +S 
Sbjct: 468 ETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSE 527

Query: 333 G-FEPDEVTSINMLVACVRSGDIKTGREM------------------------------- 360
           G    DEV S ++L  C   G  + G +M                               
Sbjct: 528 GAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDD 587

Query: 361 ----FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC-- 414
               F++M    + SWN +++ +       +A+ ++++M+  G+KPD  T A+I+S+   
Sbjct: 588 AVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKH 647

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQRNELAERVFHRIP-ELDIV 471
             + +++S + +   S++T  +I   +   +  I +  +    E AE+    +P E D+ 
Sbjct: 648 TELNLVDSCRSLF-VSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVY 706

Query: 472 CWNSMIAGLSLN 483
            W +++    +N
Sbjct: 707 VWRALLNSCRIN 718



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 41/198 (20%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H  G  +H H L++GL  +T + N  + +YSKC N   A  +F+ M  +DI SWN +++ 
Sbjct: 550 HEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAG 609

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                               +V+ W             +KAL ++ KM   G  P  IT 
Sbjct: 610 --------------------HVLHWQG-----------DKALGIWKKMEKAGIKPDSITF 638

Query: 124 ASVFKA--STALLDVEHGRRCHGLVIKIGLDKNIYVA----NALLSLYAKCGWTKHAVPV 177
           A +  A   T L  V+    C  L + +  + NI        + +S+  + G  + A   
Sbjct: 639 ALIISAYKHTELNLVD---SCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQT 695

Query: 178 FEEMS-EPNEVTFTAMMS 194
              M  EP+   + A+++
Sbjct: 696 IRNMPLEPDVYVWRALLN 713


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 205/646 (31%), Positives = 332/646 (51%), Gaps = 58/646 (8%)

Query: 140 RRCHGLVIKIGLDK------NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           R C GL      D       ++ +    L+   K G    A+ +F+ M   N V +T++M
Sbjct: 27  RVCDGLCSAAAADNGCAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVM 86

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           SG  +  R   AL MF  M+   V+ +  + ++ L  CA  G                  
Sbjct: 87  SGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRA-------------- 132

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+QVH L ++ GF  D  + + L++MY++ G + +A+ +F  +    VV +  +I+ +
Sbjct: 133 --GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAF 190

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR----------------------- 350
            +  +   A E L +M   G +P+E T   +L AC R                       
Sbjct: 191 CRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYS 250

Query: 351 ----------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                     +G+ K  + +FDS+   +V SW +M+  Y +    +EA+++F +M   GV
Sbjct: 251 STALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGV 310

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
            P+   L+I+L +C ++G+   G+Q+H +++K     D  V++ L+ +Y +    E  E 
Sbjct: 311 DPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEA 367

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           + ++I   D+V W + I+    N    +A     QM      P  ++F++VLSSCA ++S
Sbjct: 368 MLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVAS 427

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
             QG Q H    K G  ++I  G+ALI MY KCG +  AR  FD+MH  +  +WN +IHG
Sbjct: 428 LDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHG 487

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           +AQ+G  ++A+ ++  M ++G+KPDD TF+ +L  C+HSG+V+ G   F  M   +   P
Sbjct: 488 HAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTP 547

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
              HY CMID LGR G F EA  +I++MP + D +IW+ LL+SC+LH N+ + K AA+ L
Sbjct: 548 APSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRL 607

Query: 701 FRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             L  ++SA Y L++NIY+  G W+D R VR  M E  + KD   S
Sbjct: 608 MELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCS 653



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 152/602 (25%), Positives = 264/602 (43%), Gaps = 103/602 (17%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           KS  L  A  LFD MP +NVV+W +++S   RNG  E AL+++  M   G  P      +
Sbjct: 60  KSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNA 119

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A   L  +  G + H L ++ G   + ++ + L+ +Y++CG    A  VF+ M  P+
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPD 179

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +T+++S   +      A E    M+++ +  +  +++++L  C R            
Sbjct: 180 VVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPR------------ 227

Query: 246 SDNKFSRNVHGQQVHCLTI-KLGFEAD-LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                   V GQQ+H   I K+G  +  ++ S +L+D Y++NG+   A+ +F +L  ++V
Sbjct: 228 --------VLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNV 279

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---- 359
           VSW  M+  Y +  +  +A+++   M S G +P+E     +L AC   G I  GR+    
Sbjct: 280 VSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCS 336

Query: 360 -------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                          M + + +P + SW   +S+  Q+   ++A
Sbjct: 337 AIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKA 396

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           I L  +M   G  P+    + +LSSCA +  L+ G Q H  +LK     +    + LI +
Sbjct: 397 IALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINM 456

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           YSKC +   A   F  +   D+  WNS+I G + +    +A   F +MR N + P   +F
Sbjct: 457 YSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTF 516

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
             VL  C            H+ + ++G +                        FF +M  
Sbjct: 517 LGVLMGCN-----------HSGMVEEGEL------------------------FFRLMID 541

Query: 569 KNTVT-----WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           + + T     +  MI    +NG  DEA+R+  DM     +PD + +  +L +C     +D
Sbjct: 542 QYSFTPAPSHYACMIDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASCKLHRNLD 598

Query: 624 VG 625
           +G
Sbjct: 599 IG 600



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 245/528 (46%), Gaps = 106/528 (20%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H+  +R G   D ++ + LIE+YS+C +  +A+ +FD+M   D+  + +++SA C
Sbjct: 132 AGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFC 191

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++ + E A +                  AL+             +M  +G  P   T+ +
Sbjct: 192 RNGEFELAAE------------------ALI-------------QMLKQGLKPNEHTMTT 220

Query: 126 VFKASTALLDVEHGRRCHG-LVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +  A   +L    G++ HG L+ KIGL  +++Y + AL+  Y++ G  K A  VF+ +  
Sbjct: 221 ILTACPRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHC 276

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V++ +MM    +  R+ EAL++F  MI + V  +  +LS VLG C   G        
Sbjct: 277 KNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL------- 329

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q+HC  IK     D+ +SN+LL MY + G ++  E + + +    +
Sbjct: 330 ------------GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDL 377

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------- 349
           VSW   I+   Q     KAI LL +M S GF P+     ++L +C               
Sbjct: 378 VSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCL 437

Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + G + + R  FD M +  V+SWN+++  ++Q  +  +A
Sbjct: 438 ALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKA 497

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG---- 444
           +++F +M+  G+KPD +T   +L  C   G++E G+      L     ID Y  +     
Sbjct: 498 LEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE------LFFRLMIDQYSFTPAPSH 551

Query: 445 ---LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-SLDI 487
              +I +  +  R + A R+ + +P E D + W +++A   L+ +LDI
Sbjct: 552 YACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDI 599


>gi|15234184|ref|NP_193657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|2828297|emb|CAA16711.1| putative protein [Arabidopsis thaliana]
 gi|7268717|emb|CAB78924.1| putative protein [Arabidopsis thaliana]
 gi|332658761|gb|AEE84161.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 932

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 221/766 (28%), Positives = 390/766 (50%), Gaps = 79/766 (10%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           +LH   +  GL  D+ LCN L+ LY+K  N                     + SA+C   
Sbjct: 209 MLHCLAIETGLVGDSSLCNALMNLYAKGEN---------------------LSSAEC--- 244

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
                  +F  M  R++VSWN +++  + NG   K+L  +  M+  G     +T + V  
Sbjct: 245 -------VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297

Query: 129 ASTALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           A +++ ++  G   HGLVIK G   + ++ V N+++S+Y+KCG T+ A  VFEE+   + 
Sbjct: 298 ACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDV 357

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           ++  A+++G A      EA  +   M     +  D  ++ S+  +C              
Sbjct: 358 ISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICG------------- 404

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEAD-LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            D  FSR   G+ VH  T+++  ++  L + NS++DMY K G    AE++F     R +V
Sbjct: 405 -DLSFSR--EGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLV 461

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRM---KSCG-FEPDEVTSINMLVACVRS--------- 351
           SWN MI+ + Q   + KA  L + +    SC  F    V +I  L +C  S         
Sbjct: 462 SWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAI--LTSCDSSDSLIFGKSV 519

Query: 352 -------GDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG-VKP 402
                  GD+ +     ++M  +  ++SWN+++S  + S +H E+++ F+ M   G ++ 
Sbjct: 520 HCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRH 579

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  TL   +S+   +G++  G+  H  ++K+   +D  + + LI +Y +C+  E A +VF
Sbjct: 580 DLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVF 639

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             I + ++  WN +I+ LS N    E F  F+ ++   + P + +F  +LS+  +L S+ 
Sbjct: 640 GLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTS 696

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G Q H  + + G+  + FV +AL++MY  CG +    + F      +   WN +I  + 
Sbjct: 697 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHG 756

Query: 583 QNGYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
            +G G++A+ L+K++ + S ++P+  +F+++L+ACSHSG +D G+  +  M+   GV+P+
Sbjct: 757 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPV 816

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
            +H   ++D LGRAG   EA   I  +       +W  LLS+C  H + +L K  AE LF
Sbjct: 817 TEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLF 876

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            ++P N++ Y  LAN Y  LG W++   +R+++ +N + K P YS+
Sbjct: 877 EMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSV 922



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 159/630 (25%), Positives = 290/630 (46%), Gaps = 103/630 (16%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D+ + + +L+   ++ +L  +  LFDE+ E++V+ WN++I+AL +NG    A+ ++ +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRC---HGLVIKIGLDKNIYVANALLSLYAKC 168
            ++G         ++  A++AL  +   R+C   H L I+ GL  +  + NAL++LYAK 
Sbjct: 180 IHKG---NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKG 236

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
                A  VF  M   + V++  +M+         ++L+ F+ M       D+V+ S V+
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS--NSLLDMYAKNG 286
             C+     +E                G+ +H L IK G+  + H+S  NS++ MY+K G
Sbjct: 297 SACS----SIEELTL------------GESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC-GFEPDEVTSINML 345
           D ++AE +F  L  R V+S N ++ G+       +A  +L +M+S    +PD  T +++ 
Sbjct: 341 DTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400

Query: 346 VACVRSGDIKTGRE---------------------------------------MFDSMPS 366
             C   GD+   RE                                       +F +   
Sbjct: 401 SIC---GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTH 457

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREM--QFRGVKPDRTTLAIILSSCAAMGILESGK 424
             + SWN+M+S++SQ+    +A  LF+E+  ++   K   +T+  IL+SC +   L  GK
Sbjct: 458 RDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGK 517

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE--RVFHRIPEL----DIVCWNSMIA 478
            VH                        C   +L +    F R+  +    D+  WNS+I+
Sbjct: 518 SVH------------------------CWLQKLGDLTSAFLRLETMSETRDLTSWNSVIS 553

Query: 479 GLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
           G + +   +E+   F+ M R+ ++     +    +S+   L    QGR  H    K    
Sbjct: 554 GCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRE 613

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
            D  + + LI MY +C DI  A + F ++   N  +WN +I   +QN  G E  +L++++
Sbjct: 614 LDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL 673

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVE 627
               ++P++ITFV +L+A +  G    G++
Sbjct: 674 ---KLEPNEITFVGLLSASTQLGSTSYGMQ 700



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 170/764 (22%), Positives = 309/764 (40%), Gaps = 157/764 (20%)

Query: 40  HSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNG 99
           + + + F K  HK  ++ + +      S      + LFDE+PER                
Sbjct: 41  YCSNYYFSKRKHKRHFTSSVL------SPVTPIVHNLFDELPERE--------------- 79

Query: 100 LEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVAN 159
                        N     + + L  V ++     + E  R  H   +K GL +++  ++
Sbjct: 80  -------------NRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSS 126

Query: 160 ALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
            LL+ Y + G    +  +F+E+ E + + + +M++ L +  R + A+ +F  MI K    
Sbjct: 127 KLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEF 186

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           DS +L               +        K S       +HCL I+ G   D  L N+L+
Sbjct: 187 DSTTLLLA----------ASALSSLHLSRKCS------MLHCLAIETGLVGDSSLCNALM 230

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
           ++YAK  ++ SAE +F+++  R +VSWN ++          K+++  + M   G E D V
Sbjct: 231 NLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTV 290

Query: 340 TSINMLVAC-------------------------------------VRSGDIKTGREMFD 362
           T   ++ AC                                      + GD +    +F+
Sbjct: 291 TFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFE 350

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLAIILSSCAAMGILE 421
            +    V S NA+L+ ++ +   +EA  +  +MQ    ++PD  T+  I S C  +    
Sbjct: 351 ELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSR 410

Query: 422 SGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
            G+ VH  +++         V + +I +Y KC     AE +F      D+V WNSMI+  
Sbjct: 411 EGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAF 470

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATV---LSSCAKLSSSFQGRQVHAQIEKDGYV 537
           S N    +A   FK++  +E   ++FS +TV   L+SC    S   G+ VH  ++K G +
Sbjct: 471 SQNGFTHKAKNLFKEV-VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDL 529

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
              F+                  +   M   ++  +WN +I G A +G+  E++R ++ M
Sbjct: 530 TSAFL------------------RLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAM 571

Query: 598 IASG-VKPDDITFVAILTACSHSGLV---------------DVGVEIFNSMQLDHG---- 637
              G ++ D IT +  ++A  + GLV               ++  ++ N++   +G    
Sbjct: 572 SREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKD 631

Query: 638 -----------VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS---- 682
                       +P L  + C+I  L +     E   L   +  + + + +  LLS    
Sbjct: 632 IESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQ 691

Query: 683 ----SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
               S  + A+  L +R     F+ +P  SA    L ++YSS G
Sbjct: 692 LGSTSYGMQAHCHLIRRG----FQANPFVSAA---LVDMYSSCG 728



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 36/248 (14%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G+  H   +++    DT L N LI +Y +C +  SA  +F  +   ++ SWN +    
Sbjct: 598 LQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCV---- 653

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                      ISAL +N    +   ++  +  E   P  IT  
Sbjct: 654 ---------------------------ISALSQNKAGREVFQLFRNLKLE---PNEITFV 683

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            +  AST L    +G + H  +I+ G   N +V+ AL+ +Y+ CG  +  + VF      
Sbjct: 684 GLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVN 743

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFR-LMIRKAVSIDSVSLSSVLGVCAREGCGVES-DV 242
           +   + +++S         +A+E+F+ L     +  +  S  S+L  C+  G   E    
Sbjct: 744 SISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSY 803

Query: 243 FAQSDNKF 250
           + Q + KF
Sbjct: 804 YKQMEEKF 811



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 11/191 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G   H H++R G   + F+   L+++YS C    +   +F       I +WN+++SA   
Sbjct: 698 GMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGF 757

Query: 67  SDDLEFAYKLFDEMP-----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
               E A +LF E+      E N  S+ +L+SA   +G  ++ LS Y +M  E F    +
Sbjct: 758 HGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQM-EEKFGVKPV 816

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE-- 179
           T   V+     L      R  +  +  IG  +   V  ALLS     G TK    V E  
Sbjct: 817 TEHRVWIVDM-LGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVL 875

Query: 180 -EMSEPNEVTF 189
            EM EP+  ++
Sbjct: 876 FEM-EPDNASY 885


>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
 gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
          Length = 825

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 217/756 (28%), Positives = 377/756 (49%), Gaps = 86/756 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A  AGKL+H  I ++G   D  L N L+ +Y  C +   A+ +FD MP +++ +W A++
Sbjct: 115 QALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMI 174

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
            A  ++  LE A+K+F                                 M  EGF    +
Sbjct: 175 GAHAET-SLEQAFKVF-------------------------------RLMELEGFKSNFV 202

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  ++ +A +    +E G   H   ++        + NAL+++Y +CG  + A  +F  M
Sbjct: 203 TYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSM 262

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E + + + A+++   +   V EA+ +++LM+++    D V+  ++L +      G E  
Sbjct: 263 VERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSN----GPE-- 316

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
             A +D K         VH   ++ G   ++ L  +L+ MY+K   ++    +F  +P+R
Sbjct: 317 --ALTDVKL--------VHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQR 366

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-- 359
           +V+SWNVM+  Y +     KA+++ + M+  G +PD VT + +L  C  S D+K GR+  
Sbjct: 367 NVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVH 426

Query: 360 ---------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                            +FD +   +V SW AML++YS+     
Sbjct: 427 GWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQD 486

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
            A+ LF  +   GVKP   T    L +C     L  G+ VH+ ++++ +  D  + S L+
Sbjct: 487 MALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLGSALV 546

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
            +Y +C     A+  F       + V W++MIA    +  D E     + M+Q  +  + 
Sbjct: 547 AMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSP 606

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND-IFVGSALIEMYCKCGDIYGARQFFD 564
            +FA+ LS+C+ L+   +G+++H+ + +  +  +   V ++L+ MY KCG +  AR+ F+
Sbjct: 607 ATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFE 666

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
               ++ + WN +I GYAQ+G   +AV L+  M   GV PD +TFV IL+ CSH GL+D 
Sbjct: 667 TSRRQDIICWNAIISGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDE 726

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           GV  + SM ++ G+EP  D+Y C+ID LGRAG   EAE  I  +  +        LLSSC
Sbjct: 727 GVYAYASM-VELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSC 785

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           + H +V+  +RAAE +  +DP++S+ + +L++IYS+
Sbjct: 786 KSHGDVQRGRRAAEGIMEMDPRSSSAHVVLSSIYSA 821



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 193/745 (25%), Positives = 334/745 (44%), Gaps = 88/745 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA    + LH+ I+R  L +  FL N LI  Y KC++   A   F++M +K++Y+W AI 
Sbjct: 14  KALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNVYTWTAI- 72

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                         I     +     A+ +  +M  EG  P +I
Sbjct: 73  ------------------------------IGVCAHHHCHSLAIILLRQMLLEGVKPDNI 102

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           TL +   +      +  G+  HGL+ + G   ++ + NAL+S+Y  CG    A  VF+ M
Sbjct: 103 TLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAM 162

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              N +T+TAM+   A+T  + +A ++FRLM  +    + V+  +++  C++        
Sbjct: 163 PARNVITWTAMIGAHAETS-LEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPE------ 215

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
            F +          G  +H  +++     +  L N+L+ MY + G ++ A  IFS++ ER
Sbjct: 216 -FLEV---------GIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVER 265

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML-----------VACVR 350
            +++WN +I  YGQ     +A+ L Q M   G +PD+VT + +L           V  V 
Sbjct: 266 DIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVH 325

Query: 351 SGDIKTG------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHK 386
           S  +++G                        R +F+ MP  +V SWN M+++Y++    +
Sbjct: 326 SHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGR 385

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           +A+++   MQ  GVKPD  T   +L+ C     L+ G++VH    +     D  + + L+
Sbjct: 386 KAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLL 445

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y +C   E AE VF  I + +++ W +M+   S  +    A + F  +  + + PT  
Sbjct: 446 NMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCI 505

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +F   L +C    +  +GR VH+   + G   D+ +GSAL+ MY +CG I  A+  FD  
Sbjct: 506 TFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDT 565

Query: 567 H-GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
              KN VTW+ MI  + Q+G   E ++  + M   G+     TF + L+ACS+   +  G
Sbjct: 566 EVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREG 625

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
             I + ++              ++   G+ G    A  +  E   + D + W  ++S   
Sbjct: 626 KRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVF-ETSRRQDIICWNAIISGYA 684

Query: 686 LHANVRLAKRAAEELFRLDPKNSAP 710
            H   R    A E   R+  +   P
Sbjct: 685 QHGQTR---DAVELFHRMQQEGVTP 706



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 146/601 (24%), Positives = 280/601 (46%), Gaps = 53/601 (8%)

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           + +A   L  ++  RR H  +++  LD  +++ N L+  Y KC     A   FE MS  N
Sbjct: 6   LLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 65

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             T+TA++   A       A+ + R M+ + V  D+++L + L  C             +
Sbjct: 66  VYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSC-------------E 112

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           +         G+ +H L  + G + DL L N+L+ MY   G +D A+ +F  +P R+V++
Sbjct: 113 TSQALPA---GKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVIT 169

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           W  MI  + +     +A ++ + M+  GF+ + VT + ++ AC                 
Sbjct: 170 WTAMIGAHAET-SLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSV 228

Query: 350 -------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              R G ++  R +F SM    + +WNA+++ Y Q  + +EA+ 
Sbjct: 229 ESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVL 288

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           L++ M   G KPD+ T   +L+       L   K VH+  +++   I+  + + L+ +YS
Sbjct: 289 LYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYS 348

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC+  E    +F ++P+ +++ WN M+   + + L  +A    + M+ + + P   +   
Sbjct: 349 KCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVG 408

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +L+ C   +    GR+VH  I +     D+ + ++L+ MY +CG++  A   FD +  +N
Sbjct: 409 LLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRN 468

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            ++W  M+  Y++    D A+ L+  +  SGVKP  ITF+  L AC  +  +  G  + +
Sbjct: 469 VISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKG-RLVH 527

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           S  +  G +  +   + ++   GR G   +A+   D+   + + V W  ++++   H   
Sbjct: 528 SCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQD 587

Query: 691 R 691
           R
Sbjct: 588 R 588



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 178/359 (49%), Gaps = 7/359 (1%)

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           E F+ M   +V +W A++   +    H  AI L R+M   GVKPD  TL   L+SC    
Sbjct: 56  ETFERMSYKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQ 115

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            L +GK +H    ++    D  + + L+ +Y  C   + A+RVF  +P  +++ W +MI 
Sbjct: 116 ALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIG 175

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
             +  SL+ +AF  F+ M          ++ T++ +C+K      G  +H +  +     
Sbjct: 176 AHAETSLE-QAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAM 234

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           +  + +ALI MY +CG +  AR  F  M  ++ + WN +I  Y Q+G+ +EAV LY+ M+
Sbjct: 235 ETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLML 294

Query: 599 ASGVKPDDITFVAILTACSH-SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
             G KPD +TFVA+LT  +    L D  V++ +S  ++ GV   +   T ++    +   
Sbjct: 295 QEGCKPDKVTFVALLTMSNGPEALTD--VKLVHSHIVESGVSINIALGTALVAMYSKCES 352

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE--ELFRLDPKNSAPYSLL 714
             +   L ++MP + + + W V++++   H   R A +  E  +L  + P N     LL
Sbjct: 353 LEDTRWLFEKMP-QRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLL 410



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 139/287 (48%), Gaps = 9/287 (3%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASG--LIGIYSKCQRNELAERVFHRIPE 467
           +L +C  +  L+  +++H+  ++ +  +DN V  G  LI  Y KC   + A   F R+  
Sbjct: 6   LLQACPKLKALDIARRLHSQIVRAS--LDNRVFLGNHLIHTYGKCHSLDDAWETFERMSY 63

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            ++  W ++I   + +     A +  +QM    + P   +    L+SC    +   G+ +
Sbjct: 64  KNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLI 123

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H  I + G+  D+ + +AL+ MY  CG +  A++ FD M  +N +TW  MI  +A+    
Sbjct: 124 HGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETSL- 182

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI-FNSMQLDHGVEPILDHYT 646
           ++A ++++ M   G K + +T+V ++ ACS    ++VG+ +   S++    +E  L    
Sbjct: 183 EQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPL--CN 240

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
            +I   GR G   +A  +   M  + D + W  L++    H +V  A
Sbjct: 241 ALITMYGRCGRLEDARAIFSSM-VERDIIAWNALITEYGQHGHVEEA 286



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 9/197 (4%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +  +L +C KL +    R++H+QI +    N +F+G+ LI  Y KC  +  A + F+ M 
Sbjct: 3   YVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMS 62

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            KN  TW  +I   A +     A+ L + M+  GVKPD+IT +A LT+C  S  +  G  
Sbjct: 63  YKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKL 122

Query: 628 IFNSM-QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           I   + Q  H  + IL++   ++   G  G   +A+ + D MP + + + W  ++ +   
Sbjct: 123 IHGLIAQSGHQCDLILEN--ALVSMYGSCGSVDDAKRVFDAMPAR-NVITWTAMIGA--- 176

Query: 687 HANVRLAKRAAEELFRL 703
           HA   L +  A ++FRL
Sbjct: 177 HAETSLEQ--AFKVFRL 191


>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 745

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 223/685 (32%), Positives = 337/685 (49%), Gaps = 91/685 (13%)

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           HI +A  F+       +++ +  H  +IK G   +I++ N ++S+Y+KC     A  +F+
Sbjct: 5   HIQIA--FRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFD 62

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSL-SSVLGVCAREGCGV 238
           EM   N V++T M+S L  +    EAL ++  MI   +   +  L S+VL  C       
Sbjct: 63  EMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACG------ 116

Query: 239 ESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                        RNV  G+ VH    +   + D+ L N+LLDMY K G +  A+ +F  
Sbjct: 117 -----------LVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCE 165

Query: 298 LPERSVVSWNVMIAGYGQK------------------------------YQSTKAIELLQ 327
           +P ++  SWN +I GY ++                                S++A+  + 
Sbjct: 166 IPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVS 225

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------------------------- 360
            M   G + DE T  ++L AC  S ++  GRE+                           
Sbjct: 226 MMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCK 285

Query: 361 --------FD-----SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
                   FD     S  S S++ WN+MLS +  + ++ EA+ +   M   GV+ D  T 
Sbjct: 286 LLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTF 345

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           +I+L  C     L    QVH   + +   +D  V S LI IY+K      A R+F R+P+
Sbjct: 346 SIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPD 405

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            D+V W+S+I G +    D  AF  F  M    +    F  + VL +C+ L+S   G+QV
Sbjct: 406 KDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQV 465

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H+   K GY ++  V +ALI+MY KCGDI  A   F  +   +T++W  +I G AQNG  
Sbjct: 466 HSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRA 525

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
           +EA+ L   MI SG KP+ IT + +LTAC HSGLV+   ++FNS++ +HG+ P  +HY C
Sbjct: 526 EEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNC 585

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
           M+D LG+AG F EA  LI EMP K D  IW  LL +C  + N  LA   AE L    P++
Sbjct: 586 MVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPED 645

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRE 732
            + Y +L+N+Y++LG WD +  VRE
Sbjct: 646 VSVYIMLSNVYAALGMWDSVSKVRE 670



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 163/665 (24%), Positives = 293/665 (44%), Gaps = 119/665 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            K LH+HI+++G  +  F+ N +I +YSKC++   A+++FD+MPH++I SW         
Sbjct: 22  AKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSW--------- 72

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF-VPTHITLAS 125
                                   ++S L  + +  +ALS+YN+M       P     ++
Sbjct: 73  ----------------------TTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSA 110

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA   + +VE G+  H  + +  LD +I + NALL +Y KCG  + A  VF E+   N
Sbjct: 111 VLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKN 170

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS---------IDSVSLSSVLGVCAREGC 236
             ++  ++ G AK   + +A+++F  M    +          +D+ S  ++  V    G 
Sbjct: 171 ATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGK 230

Query: 237 GVESDVFA-----QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           G++ D F      ++       + G+++HC  IK GFE+  +  ++L+DMY+    +  A
Sbjct: 231 GLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEA 290

Query: 292 EVIFSNLPERSVVS-----WNVMIAGYGQKYQSTKAIELLQRM----------------K 330
             IF      S VS     WN M++G+       +A+ ++  M                K
Sbjct: 291 TKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLK 350

Query: 331 SC-------------------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSS 371
            C                   G+E D V    ++    + G I     +F+ +P   V +
Sbjct: 351 ICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVA 410

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           W+++++  ++  + K A  LF +M   G++ D   ++I+L +C+++   + GKQVH+  L
Sbjct: 411 WSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCL 470

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           K     +  V + LI +Y+KC   E A  +F  + E+D + W S+I G + N    EA  
Sbjct: 471 KKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAIS 530

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
              +M ++   P + +   VL++C            H+ + ++ +  D+F          
Sbjct: 531 LLHKMIESGTKPNKITILGVLTACR-----------HSGLVEEAW--DVFNSIETNHGLI 577

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
            C + Y                 N M+    Q G  +EAV+L  +M     KPD   + +
Sbjct: 578 PCPEHY-----------------NCMVDILGQAGRFEEAVKLISEM---PFKPDKTIWSS 617

Query: 612 ILTAC 616
           +L AC
Sbjct: 618 LLGAC 622



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 241/527 (45%), Gaps = 94/527 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H +I+++G     +  + LI++YS C     A  +FD+      Y  N+ +S    
Sbjct: 255 GREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQ------YFRNSSVS---- 304

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                            ++  WN+++S  V NG   +ALS+ + M   G      T + V
Sbjct: 305 ----------------ESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIV 348

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K      ++    + HG VI  G + +  V + L+ +YAK G   +A+ +FE + + + 
Sbjct: 349 LKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDV 408

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V ++++++G A+      A  +F  MI   + ID   +S VL  C+              
Sbjct: 409 VAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACS-------------- 454

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               + + HG+QVH L +K G+E++  ++ +L+DMYAK GD++ A  +F  L E   +SW
Sbjct: 455 --SLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSW 512

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             +I G  Q  ++ +AI LL +M   G +P+++T + +L AC  SG ++   ++F+S+ +
Sbjct: 513 TSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIET 572

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +N M+    Q+   +EA+KL  EM F   KPD+T  + +L +C      +
Sbjct: 573 NHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPF---KPDKTIWSSLLGACGTYKNRD 629

Query: 422 SGKQVHAASLKTASH-------IDN-YVASGLIGIYSKCQRN------ELAERVFHRIP- 466
               V    L T+         + N Y A G+    SK +        + A ++F+ IP 
Sbjct: 630 LANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKKRAGKIFYEIPF 689

Query: 467 -----------------------------ELDIVCWNSMIAGLSLNS 484
                                        E D+V WN++IAGL+ N+
Sbjct: 690 KFYFMEHLHLGHAKQGLNGGVVKVIYPILEPDLVSWNNVIAGLADNA 736



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 147/317 (46%), Gaps = 40/317 (12%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTA--SHIDNYVASGLIGIYSKCQRNELAER 460
           D   + I    C     +++ K +H+  +K+   +HI  ++ + +I +YSKC     A  
Sbjct: 2   DLNHIQIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHI--FILNNMISVYSKCSSIIDARN 59

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM-YPTQFSFATVLSSCAKLS 519
           +F  +P  +IV W +M++ L+ +S+  EA   + +M ++++  P QF ++ VL +C  + 
Sbjct: 60  MFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVR 119

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +   G+ VH  I +     DI + +AL++MY KCG +  A++ F  +  KN  +WN +I 
Sbjct: 120 NVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLIL 179

Query: 580 GYAQNGYGDEAVRLYKDMI------------------------------ASGVKPDDITF 609
           GYA+ G  D+A++L+  M                                 G+K D+ TF
Sbjct: 180 GYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTF 239

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM- 668
            ++L AC  S  + +G EI +   +  G E      + +ID         EA  + D+  
Sbjct: 240 PSVLKACGCSDELMLGREI-HCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYF 298

Query: 669 ---PCKDDPVIWEVLLS 682
                 +   +W  +LS
Sbjct: 299 RNSSVSESLALWNSMLS 315



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 130/318 (40%), Gaps = 52/318 (16%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           +H  GK +H+  L+ G   +  +   LI++Y+KC +   A  LF  +   D  SW +I+ 
Sbjct: 458 SHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIV 517

Query: 63  AQCKSDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFV 117
              ++   E A  L  +M E     N ++   +++A   +GL E+A  V+N + +N G +
Sbjct: 518 GCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLI 577

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P                  EH                    N ++ +  + G  + AV +
Sbjct: 578 PCP----------------EH-------------------YNCMVDILGQAGRFEEAVKL 602

Query: 178 FEEMS-EPNEVTFTAMMSGLAK-TDRVVEALEMFRLMIRKAVSIDSVSLSSVLG-VCARE 234
             EM  +P++  +++++       +R +  +    L+   A S + VS+  +L  V A  
Sbjct: 603 ISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLL---ATSPEDVSVYIMLSNVYAAL 659

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
           G         ++  K  +   G+  + +  K  F   LHL       +AK G       +
Sbjct: 660 GMWDSVSKVRETVKKIGKKRAGKIFYEIPFKFYFMEHLHLG------HAKQGLNGGVVKV 713

Query: 295 FSNLPERSVVSWNVMIAG 312
              + E  +VSWN +IAG
Sbjct: 714 IYPILEPDLVSWNNVIAG 731


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 215/687 (31%), Positives = 344/687 (50%), Gaps = 65/687 (9%)

Query: 107 VYNKMSNEGFVPTHIT-----LASVFKA-----STALLDVEHGRRCHGLVIKIGLDKNIY 156
           +YN   +  FV  H         SVF +     S  L+   H +  H  +IK  +    +
Sbjct: 24  IYNAAPSSTFVSVHHAPFFNQAPSVFSSLLHQFSNTLI---HVKSIHAQIIKNWVSTESF 80

Query: 157 VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
           +A  L+ +Y+  G+  HA  VF++ S P      AM++G  +  + +E   +FR+M    
Sbjct: 81  LAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCD 140

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           + I+S +    L  C        +D+    D++      G ++    ++ GF   L++ +
Sbjct: 141 IEINSYTCMFALKAC--------TDLL---DDEV-----GMEIIRAAVRRGFHLHLYVGS 184

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           S+++   K G +  A+ +F  +PE+ VV WN +I GY QK    ++I++   M   G  P
Sbjct: 185 SMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRP 244

Query: 337 DEVTSINMLVACVRSG-----------------------------------DIKTGREMF 361
             VT  N+L AC +SG                                   D  +   +F
Sbjct: 245 SPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVF 304

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           DSM S S+ SWNAM+S Y Q+    E+  LFR +   G   D  TL  ++  C+    LE
Sbjct: 305 DSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLE 364

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           +G+ +H+  ++        +++ ++ +YSKC   + A  VF R+ + +++ W +M+ GLS
Sbjct: 365 NGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLS 424

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N    +A   F QM++ ++     +  +++  CA L S  +GR VHA   + GY  D  
Sbjct: 425 QNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAV 484

Query: 542 VGSALIEMYCKCGDIYGARQFFD-MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           + SALI+MY KCG I+ A + F+   H K+ +  N MI GY  +G+G  A+ +Y  MI  
Sbjct: 485 ITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEE 544

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
            +KP+  TFV++LTACSHSGLV+ G  +F+SM+ DH V P   HY C++D   RAG   E
Sbjct: 545 RLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEE 604

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           A+ L+ +MP +    + E LLS CR H N  +  + A+ L  LD  NS  Y +L+NIY+ 
Sbjct: 605 ADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAE 664

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYSL 747
             +W+ +  +R LM    + K P YSL
Sbjct: 665 ARKWESVNYIRGLMRMQGMKKIPGYSL 691



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/563 (25%), Positives = 254/563 (45%), Gaps = 83/563 (14%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +HA I++N +  ++FL  +LI +YS       A+++FD                QC  
Sbjct: 64  KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFD----------------QC-- 105

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                       +PE  V   N +I+  +RN    +   ++  M +        T     
Sbjct: 106 -----------SLPETAVC--NAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFAL 152

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA T LLD E G       ++ G   ++YV +++++   K G+   A  VF+ M E + V
Sbjct: 153 KACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVV 212

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            + +++ G  +     E+++MF  MI   +    V+++++L  C + G            
Sbjct: 213 CWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGL----------- 261

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
               + V G   H   + LG   D+ +  SL+DMY+  GD  SA ++F ++  RS++SWN
Sbjct: 262 ----KKV-GMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWN 316

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------- 360
            MI+GY Q     ++  L +R+   G   D  T ++++  C ++ D++ GR +       
Sbjct: 317 AMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRK 376

Query: 361 ----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                       F  M   +V +W AML   SQ+   ++A+KLF
Sbjct: 377 ELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLF 436

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
            +MQ   V  +  TL  ++  CA +G L  G+ VHA  ++     D  + S LI +Y+KC
Sbjct: 437 CQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKC 496

Query: 453 QRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
            +   AE++F+    L D++  NSMI G  ++     A   + +M +  + P Q +F ++
Sbjct: 497 GKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSL 556

Query: 512 LSSCAKLSSSFQGRQVHAQIEKD 534
           L++C+      +G+ +   +E+D
Sbjct: 557 LTACSHSGLVEEGKALFHSMERD 579



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/541 (25%), Positives = 257/541 (47%), Gaps = 80/541 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G   H+++L  G+ +D F+   L+++YS   +T SA                        
Sbjct: 265 GMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAA----------------------- 301

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +FD M  R+++SWN +IS  V+NG+  ++ +++ ++   G      TL S+
Sbjct: 302 --------LVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSL 353

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +  +   D+E+GR  H  +I+  L+ ++ ++ A++ +Y+KCG  K A  VF  M + N 
Sbjct: 354 IRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNV 413

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T+TAM+ GL++     +AL++F  M  + V+ +SV+L S++  CA  G   +       
Sbjct: 414 ITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTK------- 466

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN-LPERSVVS 305
                    G+ VH   I+ G+  D  ++++L+DMYAK G + SAE +F+N    + V+ 
Sbjct: 467 ---------GRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVIL 517

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
            N MI GYG       A+ +  RM     +P++ T +++L AC  SG ++ G+ +F SM 
Sbjct: 518 CNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSME 577

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P    +  ++  +S++   +EA +L ++M F   +P    L  +LS C      
Sbjct: 578 RDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPF---QPSTDVLEALLSGCRTHKNT 634

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE--RVFHRIPELDIVCWNSMIA 478
             G Q+ A  L +  ++++ +   L  IY++ ++ E     R   R+  +        I 
Sbjct: 635 NMGIQI-ADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGM------KKIP 687

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G SL  +  + + FF     ++ +P+      +L +            +  ++E +GY+ 
Sbjct: 688 GYSLIEVGNKVYTFFA---SDDSHPSWADIYQLLEN------------LRLEVEAEGYIP 732

Query: 539 D 539
           D
Sbjct: 733 D 733



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 221/453 (48%), Gaps = 53/453 (11%)

Query: 51  HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
           H  +Y  +++++   K   L  A K+FD MPE++VV WN++I   V+ GL  +++ ++ +
Sbjct: 177 HLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLE 236

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M   G  P+ +T+A++ KA       + G   H  V+ +G+  +++V  +L+ +Y+  G 
Sbjct: 237 MIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGD 296

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
           T  A  VF+ M   + +++ AM+SG  +   + E+  +FR +++     DS +L S++  
Sbjct: 297 TGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLI-- 354

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
               GC   SD+            +G+ +H   I+   E+ L LS +++DMY+K G +  
Sbjct: 355 ---RGCSQTSDL-----------ENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQ 400

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A ++F  + +++V++W  M+ G  Q   +  A++L  +M+      + VT ++++  C  
Sbjct: 401 ATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAH 460

Query: 351 SGDIKTGREM----------FDSMPSPS--------------------------VSSWNA 374
            G +  GR +          FD++ + +                          V   N+
Sbjct: 461 LGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNS 520

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV-HAASLKT 433
           M+  Y    + + A+ ++  M    +KP++TT   +L++C+  G++E GK + H+     
Sbjct: 521 MIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDH 580

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
                +   + L+ ++S+  R E A+ +  ++P
Sbjct: 581 DVRPQHKHYACLVDLHSRAGRLEEADELVKQMP 613


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 192/525 (36%), Positives = 283/525 (53%), Gaps = 35/525 (6%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +QVH   IK   E + H+ N+LL +Y + G +  A  +F  L ++S  SWN MIAGY + 
Sbjct: 48  KQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEH 107

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------------------- 349
             +  A+ L + M   G +P+  T + +L AC                            
Sbjct: 108 KHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVG 167

Query: 350 --------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                   + G I   R +FD++ +  + SW  M+ +Y+QS N KEA +L  +M+  G K
Sbjct: 168 TALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFK 227

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P+  T   IL++CA+ G L+  K+VH  +L     +D  V + L+ +Y+K    + A  V
Sbjct: 228 PNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVV 287

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F R+   D+V WN MI   + +    EA+  F QM+     P    F ++L++CA   + 
Sbjct: 288 FDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGAL 347

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
              +++H      G   D+ VG+AL+ MY K G I  AR  FD M  +N V+WN MI G 
Sbjct: 348 EWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGL 407

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           AQ+G G +A+ +++ M A GVKPD +TFVA+L+ACSH+GLVD G   + +M   +G+EP 
Sbjct: 408 AQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPD 467

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           + H  CM+D LGRAG   EA++ ID M    D   W  LL SCR + NV L +  A+E  
Sbjct: 468 VSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERL 527

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +LDPKN+A Y LL+NIY+  G+WD +  VR +M E  I K+P  S
Sbjct: 528 KLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRS 572



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/564 (26%), Positives = 254/564 (45%), Gaps = 87/564 (15%)

Query: 98  NGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYV 157
           N L E  + + N++   G +        V K      D+   ++ H  +IK  +++N +V
Sbjct: 7   NTLSEAIVVLMNRL-QRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHV 65

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
            N LL +Y +CG  + A  VF+ + + +  ++ AM++G  +     +A+ +FR M  + V
Sbjct: 66  MNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGV 125

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
             ++ +   +L  CA                  S    G++VH      G E+D+ +  +
Sbjct: 126 QPNAGTYMIILKACA----------------SLSALKWGKEVHACIRHGGLESDVRVGTA 169

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           LL MY K G ++ A  IF NL    ++SW VMI  Y Q     +A  L+ +M+  GF+P+
Sbjct: 170 LLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPN 229

Query: 338 EVTSINMLVAC-----------------------------------VRSGDIKTGREMFD 362
            +T +++L AC                                    +SG I   R +FD
Sbjct: 230 AITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFD 289

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            M    V SWN M+ ++++     EA  LF +MQ  G KPD      IL++CA+ G LE 
Sbjct: 290 RMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEW 349

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
            K++H  +L +   +D  V + L+ +YSK    + A  VF R+   ++V WN+MI+GL+ 
Sbjct: 350 VKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQ 409

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR-QVHAQIEKDGYVNDIF 541
           + L  +A   F++M  + + P + +F  VLS+C+      +GR Q  A  +  G   D+ 
Sbjct: 410 HGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVS 469

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
             + ++++  + G +  A+ F D M                                   
Sbjct: 470 HCNCMVDLLGRAGRLMEAKLFIDNM----------------------------------A 495

Query: 602 VKPDDITFVAILTACSHSGLVDVG 625
           V PD+ T+ A+L +C   G V++G
Sbjct: 496 VDPDEATWGALLGSCRTYGNVELG 519



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 220/454 (48%), Gaps = 55/454 (12%)

Query: 15  LRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFD----KMPHKDIYSWNAILSAQCKSDDL 70
           L+ GL  D+F+   +++   K  +  +A+ + D        ++ +  N +L    +   L
Sbjct: 20  LQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRL 79

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
           + A  +FD + +++  SWN +I+  V +   E A+ ++ +M +EG  P   T   + KA 
Sbjct: 80  QEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKAC 139

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
            +L  ++ G+  H  +   GL+ ++ V  ALL +Y KCG    A  +F+ +   + +++T
Sbjct: 140 ASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWT 199

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
            M+   A++    EA  +   M ++    ++++  S+L  CA EG             K+
Sbjct: 200 VMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGA-----------LKW 248

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
            + VH        +  G E D+ +  +L+ MYAK+G +D A V+F  +  R VVSWNVMI
Sbjct: 249 VKRVHRH-----ALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMI 303

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------------- 349
             + +  +  +A +L  +M++ G +PD +  +++L AC                      
Sbjct: 304 GAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLE 363

Query: 350 --------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                         +SG I   R +FD M   +V SWNAM+S  +Q    ++A+++FR M
Sbjct: 364 VDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRM 423

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
              GVKPDR T   +LS+C+  G+++ G+  + A
Sbjct: 424 TAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLA 457



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 198/431 (45%), Gaps = 55/431 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA I   GL  D  +   L+ +Y KC + + A+                       
Sbjct: 148 GKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEAR----------------------- 184

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++FD +   +++SW  +I A  ++G  ++A  +  +M  EGF P  IT  S+
Sbjct: 185 --------RIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSI 236

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  +   ++  +R H   +  GL+ ++ V  AL+ +YAK G    A  VF+ M   + 
Sbjct: 237 LNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDV 296

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M+   A+  R  EA ++F  M  +    D++   S+L  CA  G           
Sbjct: 297 VSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGA---------- 346

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             ++ + +H        +  G E D+ +  +L+ MY+K+G +D A V+F  +  R+VVSW
Sbjct: 347 -LEWVKKIHRH-----ALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSW 400

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N MI+G  Q      A+E+ +RM + G +PD VT + +L AC  +G +  GR  + +M  
Sbjct: 401 NAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQ 460

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P VS  N M+    ++    EA KLF  +    V PD  T   +L SC   G +E
Sbjct: 461 VYGIEPDVSHCNCMVDLLGRAGRLMEA-KLF--IDNMAVDPDEATWGALLGSCRTYGNVE 517

Query: 422 SGKQVHAASLK 432
            G+ V    LK
Sbjct: 518 LGELVAKERLK 528


>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
          Length = 992

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 219/778 (28%), Positives = 387/778 (49%), Gaps = 87/778 (11%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG  LHA  L++G+  D  +    I +Y+   +  S+  LF +                 
Sbjct: 261 AGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQ----------------- 303

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                     L D     N+VS N++IS  +++G  EKA  V+  M  +G VP  +T+ S
Sbjct: 304 ---------SLVD-----NLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVS 349

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +    +    + HG   HG+VIK GL + + V +AL+S+Y+K G    AV +F  ++E +
Sbjct: 350 ILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKS 409

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           ++ + +++SG    ++    +   R M  + V  D++++ SV+  C              
Sbjct: 410 QLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKC-------------- 455

Query: 246 SDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
              + + ++H G+ +H   ++   E +  + N+LL MYA  G +     +F  +  R+++
Sbjct: 456 ---RHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLI 512

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----------------C 348
           SWN +I+G+ +   S   +    +M+    + D VT I ++ +                 
Sbjct: 513 SWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLA 572

Query: 349 VRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
           +RSG                    I+ G ++FDS+ S +  S+NA+++ Y ++   KE +
Sbjct: 573 IRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEIL 632

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF  M     KP+  TL  +L  C +      GK VH+ +++  S ++  + +  I +Y
Sbjct: 633 PLFYHMIKNDQKPNIITLLNLLPICHSQ---LQGKTVHSYAIRNFSKLETSLFTSAICMY 689

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           S+    E    +F  + E + + WN++++          AF +F+Q++   +     +  
Sbjct: 690 SRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTML 749

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
            ++S+C++L  +     V A   + G+   I V +ALI+M+ +CG I  AR+ FD+   K
Sbjct: 750 ALISACSQLGKADLAECVTAIALQKGFDGTIVVLNALIDMHSRCGSISFARKIFDISMEK 809

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           ++V+W+ MI+ Y+ +G G  A+ L+  M+++G+KPDDITFV++L+ACS SG ++ G  +F
Sbjct: 810 DSVSWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDITFVSVLSACSRSGFLEQGRTLF 869

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
            SM  DHG+ P ++HY CM+D LGR GH  EA  ++  MP +    + E LL +CR H N
Sbjct: 870 RSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGN 929

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            +L +   + L   D  N   Y +L+NIY+S G+W D   +R  M    ++KD   SL
Sbjct: 930 SKLGESVGKILTESDHGNPRSYVMLSNIYASAGKWSDYERLRSDMEAKGLIKDVGVSL 987



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/667 (23%), Positives = 316/667 (47%), Gaps = 56/667 (8%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            A+L    KS  ++ + ++FD M  R+++SWN +IS    NG   +A     +M  +GF 
Sbjct: 181 TALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFR 240

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   +L  +    + L   + G   H   +K G+  +  V  A +S+YA  G    ++ +
Sbjct: 241 PNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSL 300

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F +    N V+  +M+S   +     +A  +FRLM  K +  + V++ S+L  C+     
Sbjct: 301 FHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCS----- 355

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                     N F  N HG+ VH + IK G    + + ++L+ MY+K GD+DSA  +FS+
Sbjct: 356 ----------NFFGIN-HGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSS 404

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           + E+S + WN +I+GY    +    +  ++RM+  G +PD +T I+++  C  + D+  G
Sbjct: 405 VTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVG 464

Query: 358 R-----------------------------------EMFDSMPSPSVSSWNAMLSSYSQS 382
           +                                   ++F +M   ++ SWN ++S ++++
Sbjct: 465 KSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAEN 524

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
            +    ++ F +M+   ++ D  TL  ++SS +A+  +  G+ VH+ ++++  ++D  VA
Sbjct: 525 GDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVA 584

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + LI +Y+ C   +  E++F  +  ++ + +N+++ G   N+L  E    F  M +N+  
Sbjct: 585 NALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMIKNDQK 644

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +   +L  C    S  QG+ VH+   ++    +  + ++ I MY +  ++      
Sbjct: 645 PNIITLLNLLPIC---HSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNL 701

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F ++  +N + WN ++    Q      A   ++ +    VK D +T +A+++ACS  G  
Sbjct: 702 FCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKA 761

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D+  E   ++ L  G +  +     +ID   R G    A  + D +  + D V W  +++
Sbjct: 762 DLA-ECVTAIALQKGFDGTIVVLNALIDMHSRCGSISFARKIFD-ISMEKDSVSWSTMIN 819

Query: 683 SCRLHAN 689
           +  +H +
Sbjct: 820 AYSMHGD 826



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 161/664 (24%), Positives = 287/664 (43%), Gaps = 59/664 (8%)

Query: 98  NGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYV 157
           +G   + L +Y ++    F   + T   V +A  A+  +  G+  H  V++ G   N+ V
Sbjct: 122 HGFHRELLGLYREVC--AFGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGV 179

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
             ALL +YAK G    +  VF+ M   + +++ AM+SG +    ++EA E  + M +   
Sbjct: 180 QTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGF 239

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
             ++ SL  ++ + +  G GV                 G  +H   +K G   D  ++ +
Sbjct: 240 RPNASSLVGIVSMVS--GLGVRDA--------------GDPLHAFALKSGVLGDESVTPA 283

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
            + MYA  G + S+  +F      ++VS N MI+   Q     KA  + + M+  G  P+
Sbjct: 284 FISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPN 343

Query: 338 EVTSINMLVAC-----------------------------------VRSGDIKTGREMFD 362
            VT +++L  C                                    + GD+ +   +F 
Sbjct: 344 LVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFS 403

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
           S+   S   WN+++S Y  +      +   R MQ  GV PD  T+  ++S C     L  
Sbjct: 404 SVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHV 463

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           GK +HA ++++   ++  V + L+ +Y+ C +  +  ++FH +    ++ WN++I+G + 
Sbjct: 464 GKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAE 523

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           N   +    FF QMR  +M     +   ++SS + +     G  VH+   + G   D+ V
Sbjct: 524 NGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSV 583

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            +ALI MY  CG I    + FD +   NT+++N ++ GY +N    E + L+  MI +  
Sbjct: 584 ANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMIKNDQ 643

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
           KP+ IT + +L  C HS L    V  +           +     CM        + H   
Sbjct: 644 KPNIITLLNLLPIC-HSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLF 702

Query: 663 MLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL-LANIYSSL 721
            L+ E     + ++W  +LS+C       +A     ++  L+ K  A   L L +  S L
Sbjct: 703 CLVGE----RNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQL 758

Query: 722 GRWD 725
           G+ D
Sbjct: 759 GKAD 762



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 150/314 (47%), Gaps = 4/314 (1%)

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
           V   N  +  +S    H+E + L+RE+   G   D  T   ++ +CAA+  L  GK+VH 
Sbjct: 109 VYDLNIAVRCFSDHGFHRELLGLYREVCAFG--SDNFTFPPVIRACAAVSCLRLGKEVHC 166

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
             ++T    +  V + L+ +Y+K  + +L+ RVF  +   D++ WN+MI+G SLN   +E
Sbjct: 167 RVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLE 226

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIE 548
           A    KQM+Q+   P   S   ++S  + L     G  +HA   K G + D  V  A I 
Sbjct: 227 AAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFIS 286

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           MY   G +  +   F      N V+ N MI    Q+G  ++A  +++ M   G+ P+ +T
Sbjct: 287 MYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVT 346

Query: 609 FVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
            V+IL  CS+   ++ G E  + M +  G+   +   + ++    + G    A  L   +
Sbjct: 347 VVSILPCCSNFFGINHG-ESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSV 405

Query: 669 PCKDDPVIWEVLLS 682
             K   ++W  L+S
Sbjct: 406 TEKSQ-LLWNSLIS 418



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 130/301 (43%), Gaps = 50/301 (16%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           + + GK +H++ +RN    +T L    I +YS+ NN     +LF  +  ++   WNAILS
Sbjct: 659 SQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILS 718

Query: 63  A--QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           A  QCK   + F Y  F ++   NV +                                 
Sbjct: 719 ACVQCKQAGVAFDY--FRQIQFLNVKT-------------------------------DA 745

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           +T+ ++  A + L   +       + ++ G D  I V NAL+ ++++CG    A  +F+ 
Sbjct: 746 VTMLALISACSQLGKADLAECVTAIALQKGFDGTIVVLNALIDMHSRCGSISFARKIFDI 805

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
             E + V+++ M++  +       AL++F +M+   +  D ++  SVL  C+R G     
Sbjct: 806 SMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDITFVSVLSACSRSG----- 860

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
             F +      R++     H +T ++   A       ++D+  + G +D A  I + +P 
Sbjct: 861 --FLEQGRTLFRSMLAD--HGITPRMEHYA------CMVDLLGRTGHLDEAYDIVTTMPF 910

Query: 301 R 301
           R
Sbjct: 911 R 911


>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 202/646 (31%), Positives = 346/646 (53%), Gaps = 54/646 (8%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           +R H L++ +G+  +  + + L + YA+C    +A  +F+++S+P   ++ AMM    + 
Sbjct: 31  KRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQI 90

Query: 200 DRVVEALEMFRLMIRKAVSI-DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
            R  +AL +F  M+    ++ D  +   V+     + CG  S +           +HGQ 
Sbjct: 91  GRPFDALNLFVEMLGSGRTLPDKFTYPVVI-----KACGDLSLI------DVGVGIHGQ- 138

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
               T K G+++D  + N+LL MY   G+ ++A+++F  + ER+V+SWN MI GY +   
Sbjct: 139 ----TFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNC 194

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------- 359
           +  A+ +  RM   G EPD  T +++L AC    +++ GRE                   
Sbjct: 195 AEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNA 254

Query: 360 ----------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                           +   M    V +W  +++ Y  + + + A+ L   MQ  GVKP+
Sbjct: 255 LVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPN 314

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             ++A +LS+C ++  L  GK +HA +++     +  V + LI +Y+KC    L+ +VF 
Sbjct: 315 SVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFM 374

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
              +     WN++++G   N L  EA   FKQM   ++ P   +F ++L + A L+   Q
Sbjct: 375 GTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQ 434

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM--MHGKNTVTWNEMIHGY 581
              +H  + + G++  + V S L+++Y KCG +  A Q F++  +  K+ + W+ +I  Y
Sbjct: 435 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAY 494

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
            ++G+G  AV+L+  M+ SGVKP+ +TF ++L ACSH+GLV+ G  +FN M   H +   
Sbjct: 495 GKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISH 554

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           +DHYTCMID LGRAG  ++A  LI  MP   +  +W  LL +C +H NV L + AA   F
Sbjct: 555 VDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTF 614

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           +L+P+N+  Y LLA +Y+++GRW D   VR++++E  + K PA+SL
Sbjct: 615 KLEPENTGNYVLLAKLYAAVGRWGDAERVRDMVNEVGLRKLPAHSL 660



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 249/554 (44%), Gaps = 87/554 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           ++H   K LHA IL  G+F  + LC++L   Y++C++   A HLFDK            L
Sbjct: 25  QSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDK------------L 72

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG-FVPTH 120
           S  C                   + SWN ++   V+ G    AL+++ +M   G  +P  
Sbjct: 73  SQPC-------------------LFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDK 113

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T   V KA   L  ++ G   HG   K G D + +V N LL++Y   G  + A  VF+ 
Sbjct: 114 FTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDP 173

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M E   +++  M++G  + +   +A+ ++  M+   V  D  ++ SVL  C         
Sbjct: 174 MQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACG-------- 225

Query: 241 DVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                      +NV  G++VH L  + GF  ++ + N+L+DMY K G M  A ++   + 
Sbjct: 226 ---------LLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMD 276

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR- 358
           ++ VV+W  +I GY     +  A+ L   M+  G +P+ V+  ++L AC     +  G+ 
Sbjct: 277 DKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKC 336

Query: 359 ----------------------------------EMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                             ++F        + WNA+LS + Q+  
Sbjct: 337 LHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRL 396

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            +EAI+LF++M  + V+PD  T   +L + A +  L+    +H   +++       VAS 
Sbjct: 397 AREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASI 456

Query: 445 LIGIYSKCQRNELAERVFHRI--PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           L+ IYSKC     A ++F+ I   + DI+ W+++IA    +     A   F QM Q+ + 
Sbjct: 457 LVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVK 516

Query: 503 PTQFSFATVLSSCA 516
           P   +F +VL +C+
Sbjct: 517 PNHVTFTSVLHACS 530



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 33/231 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA  +R  +  +  +   LI +Y+KCN                           C 
Sbjct: 334 GKCLHAWAIRQKIESEVIVETALINMYAKCN---------------------------CG 366

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +     +YK+F    ++    WN L+S  ++N L  +A+ ++ +M  +   P H T  S+
Sbjct: 367 N----LSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSL 422

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS--EP 184
             A   L D++     H  +I+ G    + VA+ L+ +Y+KCG   +A  +F  +S  + 
Sbjct: 423 LPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDK 482

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           + + ++A+++   K      A+++F  M++  V  + V+ +SVL  C+  G
Sbjct: 483 DIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAG 533



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 12/185 (6%)

Query: 508 FATVLSSCAKLSSSFQGRQ-------VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           FAT  + C  L   F   Q       +HA I   G  +   + S L   Y +C     A 
Sbjct: 7   FATTAAQCESLLGKFSASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYAS 66

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VKPDDITFVAILTACSHS 619
             FD +      +WN M+  Y Q G   +A+ L+ +M+ SG   PD  T+  ++ AC   
Sbjct: 67  HLFDKLSQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDL 126

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI-WE 678
            L+DVGV I +      G +        ++     AG    A+++ D  P ++  VI W 
Sbjct: 127 SLIDVGVGI-HGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFD--PMQERTVISWN 183

Query: 679 VLLSS 683
            +++ 
Sbjct: 184 TMING 188


>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 205/646 (31%), Positives = 332/646 (51%), Gaps = 58/646 (8%)

Query: 140 RRCHGLVIKIGLDK------NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           R C GL      D       ++ +    L+   K G    A+ +F+ M   N V +T++M
Sbjct: 27  RVCDGLCSAAAADNGCAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVM 86

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           SG  +  R   AL MF  M+   V+ +  + ++ L  CA  G                  
Sbjct: 87  SGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRA-------------- 132

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+QVH L ++ GF  D  + + L++MY++ G + +A+ +F  +    VV +  +I+ +
Sbjct: 133 --GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAF 190

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR----------------------- 350
            +  +   A E L +M   G +P+E T   +L AC R                       
Sbjct: 191 CRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYS 250

Query: 351 ----------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                     +G+ K  + +FDS+   +V SW +M+  Y +    +EA+++F +M   GV
Sbjct: 251 STALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGV 310

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
            P+   L+I+L +C ++G+   G+Q+H +++K     D  V++ L+ +Y +    E  E 
Sbjct: 311 DPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEA 367

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           + ++I   D+V W + I+    N    +A     QM      P  ++F++VLSSCA ++S
Sbjct: 368 MLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVAS 427

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
             QG Q H    K G  ++I  G+ALI MY KCG +  AR  FD+MH  +  +WN +IHG
Sbjct: 428 LDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHG 487

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           +AQ+G  ++A+ ++  M ++G+KPDD TF+ +L  C+HSG+V+ G   F  M   +   P
Sbjct: 488 HAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTP 547

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
              HY CMID LGR G F EA  +I++MP + D +IW+ LL+SC+LH N+ + K AA+ L
Sbjct: 548 APSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRL 607

Query: 701 FRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             L  ++SA Y L++NIY+  G W+D R VR  M E  + KD   S
Sbjct: 608 MELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCS 653



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 153/607 (25%), Positives = 266/607 (43%), Gaps = 103/607 (16%)

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           L+   KS  L  A  LFD MP +NVV+W +++S   RNG  E AL+++  M   G  P  
Sbjct: 55  LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPND 114

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
               +   A   L  +  G + H L ++ G   + ++ + L+ +Y++CG    A  VF+ 
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M  P+ V +T+++S   +      A E    M+++ +  +  +++++L  C R       
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPR------- 227

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTI-KLGFEAD-LHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                        V GQQ+H   I K+G  +  ++ S +L+D Y++NG+   A+ +F +L
Sbjct: 228 -------------VLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSL 274

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
             ++VVSW  M+  Y +  +  +A+++   M S G +P+E     +L AC   G I  GR
Sbjct: 275 HCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGR 331

Query: 359 E-----------------------------------MFDSMPSPSVSSWNAMLSSYSQSE 383
           +                                   M + + +P + SW   +S+  Q+ 
Sbjct: 332 QLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNG 391

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
             ++AI L  +M   G  P+    + +LSSCA +  L+ G Q H  +LK     +    +
Sbjct: 392 FGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGN 451

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            LI +YSKC +   A   F  +   D+  WNS+I G + +    +A   F +MR N + P
Sbjct: 452 ALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKP 511

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              +F  VL  C            H+ + ++G +                        FF
Sbjct: 512 DDSTFLGVLMGCN-----------HSGMVEEGEL------------------------FF 536

Query: 564 DMMHGKNTVT-----WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
            +M  + + T     +  MI    +NG  DEA+R+  DM     +PD + +  +L +C  
Sbjct: 537 RLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASCKL 593

Query: 619 SGLVDVG 625
              +D+G
Sbjct: 594 HRNLDIG 600



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 147/591 (24%), Positives = 271/591 (45%), Gaps = 112/591 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H+  +R G   D ++ + LIE+YS+C +  +A+ +FD+M   D+  + +++SA C
Sbjct: 132 AGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFC 191

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++ + E A +                  AL+             +M  +G  P   T+ +
Sbjct: 192 RNGEFELAAE------------------ALI-------------QMLKQGLKPNEHTMTT 220

Query: 126 VFKASTALLDVEHGRRCHG-LVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +  A   +L    G++ HG L+ KIGL  +++Y + AL+  Y++ G  K A  VF+ +  
Sbjct: 221 ILTACPRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHC 276

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V++ +MM    +  R+ EAL++F  MI + V  +  +LS VLG C   G        
Sbjct: 277 KNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL------- 329

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q+HC  IK     D+ +SN+LL MY + G ++  E + + +    +
Sbjct: 330 ------------GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDL 377

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------- 349
           VSW   I+   Q     KAI LL +M S GF P+     ++L +C               
Sbjct: 378 VSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCL 437

Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + G + + R  FD M +  V+SWN+++  ++Q  +  +A
Sbjct: 438 ALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKA 497

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG---- 444
           +++F +M+  G+KPD +T   +L  C   G++E G+      L     ID Y  +     
Sbjct: 498 LEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE------LFFRLMIDQYSFTPAPSH 551

Query: 445 ---LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-SLDIEAFMFFKQMRQN 499
              +I +  +  R + A R+ + +P E D + W +++A   L+ +LDI      + M  +
Sbjct: 552 YACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELS 611

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEM 549
           +     +    ++S+   +   ++  R+V  ++++ G   D   G + IE+
Sbjct: 612 DRDSASY---VLMSNIYAMHGEWEDARKVRRRMDETGVKKD--AGCSWIEI 657


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 198/517 (38%), Positives = 296/517 (57%), Gaps = 39/517 (7%)

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           E ++   N ++  YAK+  +  A  +F   P+   VS+N +I+GY    ++  A+ L +R
Sbjct: 71  EPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKR 130

Query: 329 MKSCGFEPDEVTSINMLVACVRSGD---------IKTGREMFDSMPSPSVS--------- 370
           M+  GFE D  T   ++ AC    D         +  G + + S+ +  V+         
Sbjct: 131 MRELGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLR 190

Query: 371 ----------------SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                           SWN+M+ +Y Q +   +A+ L++EM F+G K D  TLA +L++ 
Sbjct: 191 EAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ-RNELA--ERVFHRIPELDIV 471
            ++  L  G+Q H   +K   H +++V SGLI  YSKC  R+ ++  E+VF  I   D+V
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLV 310

Query: 472 CWNSMIAGLSLNSL-DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA- 529
            WN+MI+G S+N     EA   F+QM++    P   SF  V S+C+ LSS  QG+Q+H  
Sbjct: 311 LWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGL 370

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            I+ +   N I V +ALI +Y K G++  AR+ FD M   N V++N MI GYAQ+G+G E
Sbjct: 371 AIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTE 430

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+RLY+ M+ SG+ P++ITFVAIL+AC+H G VD G + FN+M+    +EP  +HY+CMI
Sbjct: 431 ALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMI 490

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
           D LGRAG   EAE  ID MP K   V W  LL +CR H N+ LA+RAA+EL  + P  + 
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAAT 550

Query: 710 PYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           PY +LAN+Y+  G+W+++ +VR+ M    I K P  S
Sbjct: 551 PYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCS 587



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/517 (26%), Positives = 236/517 (45%), Gaps = 65/517 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA  +++ +   T+L N  + LYSKC     A+  FD     +++S+N I+ A  K
Sbjct: 27  GKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAK 86

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +  A +LFDE P+ + VS+N LIS          A+ ++ +M   GF     TL+ +
Sbjct: 87  DSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGL 146

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
             A    +D+   ++ H   +  G D    V NA ++ Y+K G  + AV VF  M    +
Sbjct: 147 IAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRD 204

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           EV++ +M+    +     +AL +++ MI K   ID  +L+SVL                 
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL-------------- 250

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS---AEVIFSNLPERS 302
                   + G+Q H   IK GF  + H+ + L+D Y+K G  D    +E +F  +    
Sbjct: 251 --TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPD 308

Query: 303 VVSWNVMIAGYG-QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
           +V WN MI+GY   +  S +A++  ++M+  G  PD+ + + +  AC             
Sbjct: 309 LVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIH 368

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   +SG++   R +FD MP  +  S+N M+  Y+Q  + 
Sbjct: 369 GLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHG 428

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---VHAASLKTASHIDNYVA 442
            EA++L++ M   G+ P+  T   ILS+CA  G ++ G++       + K     ++Y  
Sbjct: 429 TEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHY-- 486

Query: 443 SGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
           S +I +  +  + E AER    +P +   V W +++ 
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG 523



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 227/523 (43%), Gaps = 92/523 (17%)

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN---- 185
           S A  D+  G+  H L +K  +  + Y++N  ++LY+KCG   +A   F+   EPN    
Sbjct: 18  SVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSY 77

Query: 186 ---------------------------EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
                                       V++  ++SG A     V A+ +F+ M      
Sbjct: 78  NVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFE 137

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
           +D  +LS ++  C         D+              +Q+HC  +  GF++   ++N+ 
Sbjct: 138 VDGFTLSGLIAACCD-----RVDLI-------------KQLHCFAVSGGFDSYSSVNNAF 179

Query: 279 LDMYAKNGDMDSAEVIFSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           +  Y+K G +  A  +F  +   R  VSWN MI  YGQ  +  KA+ L + M   GF+ D
Sbjct: 180 VTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKID 239

Query: 338 EVTSINMLVACVRSGDIKTGRE-------------------------------------- 359
             T  ++L A      +  GR+                                      
Sbjct: 240 MFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEK 299

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENH-KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           +F  + SP +  WN M+S YS +E H +EA+K FR+MQ  G +PD  +   + S+C+ + 
Sbjct: 300 VFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLS 359

Query: 419 ILESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
               GKQ+H  ++K+    +   V + LI +Y K      A RVF R+PEL+ V +N MI
Sbjct: 360 SPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMI 419

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            G + +    EA   +++M  + + P   +F  +LS+CA      +G++    +++   +
Sbjct: 420 KGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKI 479

Query: 538 N-DIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMI 578
             +    S +I++  + G +  A +F D M  K  +V W  ++
Sbjct: 480 EPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 182/368 (49%), Gaps = 30/368 (8%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPE-RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
           NA ++   K   L  A  +F  M   R+ VSWN++I A  ++    KAL++Y +M  +GF
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGF 236

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW---TKH 173
                TLASV  A T+L  +  GR+ HG +IK G  +N +V + L+  Y+KCG       
Sbjct: 237 KIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSD 296

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLA-KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +  VF+E+  P+ V +  M+SG +   +   EA++ FR M R     D  S      VC 
Sbjct: 297 SEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSF-----VCV 351

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD-LHLSNSLLDMYAKNGDMDSA 291
              C           +  S    G+Q+H L IK    ++ + ++N+L+ +Y K+G++  A
Sbjct: 352 TSAC-----------SNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDA 400

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
             +F  +PE + VS+N MI GY Q    T+A+ L QRM   G  P+ +T + +L AC   
Sbjct: 401 RRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHC 460

Query: 352 GDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
           G +  G++ F++M       P    ++ M+    ++   +EA +    M +   KP    
Sbjct: 461 GKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPY---KPGSVA 517

Query: 407 LAIILSSC 414
            A +L +C
Sbjct: 518 WAALLGAC 525



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 188/419 (44%), Gaps = 42/419 (10%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ +H L +K    +  +LSN  +++Y+K G +  A   F +  E +V S+NV++  Y  
Sbjct: 27  GKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYA- 85

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                             +   I   R++FD  P P   S+N +
Sbjct: 86  ----------------------------------KDSKIHIARQLFDENPQPDTVSYNTL 111

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +S Y+ +     A+ LF+ M+  G + D  TL+ ++++C     ++  KQ+H  ++    
Sbjct: 112 ISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDR--VDLIKQLHCFAVSGGF 169

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFK 494
              + V +  +  YSK      A  VF+ +  L D V WNSMI     +    +A   +K
Sbjct: 170 DSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYK 229

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           +M         F+ A+VL++   L     GRQ H ++ K G+  +  VGS LI+ Y KCG
Sbjct: 230 EMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG 289

Query: 555 DIYG---ARQFFDMMHGKNTVTWNEMIHGYAQN-GYGDEAVRLYKDMIASGVKPDDITFV 610
              G   + + F  +   + V WN MI GY+ N  + +EAV+ ++ M   G +PDD +FV
Sbjct: 290 GRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFV 349

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
            + +ACS+      G +I       +     +     +I    ++G+  +A  + D MP
Sbjct: 350 CVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMP 408



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 137/317 (43%), Gaps = 56/317 (17%)

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC---------------- 452
           ++L S A   +  +GK +HA  +K+      Y+++  + +YSKC                
Sbjct: 14  LLLKSVAERDLF-TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEP 72

Query: 453 ---------------QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
                           +  +A ++F   P+ D V +N++I+G +     + A + FK+MR
Sbjct: 73  NVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMR 132

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           +       F+ + ++++C         +Q+H      G+ +   V +A +  Y K G + 
Sbjct: 133 ELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLR 190

Query: 558 GARQFFDMMHG-KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
            A   F  M G ++ V+WN MI  Y Q+  G +A+ LYK+MI  G K D  T  ++L A 
Sbjct: 191 EAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250

Query: 617 S-----------HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
           +           H  L+  G       Q  H    ++D Y+    C GR G   ++E + 
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFH-----QNSHVGSGLIDFYS---KCGGRDG-MSDSEKVF 301

Query: 666 DEMPCKDDPVIWEVLLS 682
            E+    D V+W  ++S
Sbjct: 302 QEI-LSPDLVLWNTMIS 317



 Score = 45.4 bits (106), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 29/137 (21%), Positives = 63/137 (45%), Gaps = 9/137 (6%)

Query: 501 MYPTQFSFAT----VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           M  TQ+ F +    +L S A+    F G+ +HA   K    +  ++ +  + +Y KCG +
Sbjct: 1   MNQTQWKFKSFRDLLLKSVAE-RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCL 59

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             AR  FD     N  ++N ++  YA+    D  + + + +     +PD +++  +++  
Sbjct: 60  SYARAAFDSTEEPNVFSYNVIVKAYAK----DSKIHIARQLFDENPQPDTVSYNTLISGY 115

Query: 617 SHSGLVDVGVEIFNSMQ 633
           + +      + +F  M+
Sbjct: 116 ADARETVAAMVLFKRMR 132


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 220/690 (31%), Positives = 337/690 (48%), Gaps = 117/690 (16%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            A + + S  + D   GR  H  +IK GL   +Y+ N L++ YAK G  + A  VF+EM 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 183 EPNEVTFTAMMSGLAK------TDRVV-------------------------EALEMFRL 211
             +  ++  ++SG AK      + R++                          A+ MF  
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           MI + V     ++S+VL  CA        D+             G+++H   +KLG  + 
Sbjct: 133 MISERVPPSQFTVSNVLSSCA---ANQTLDI-------------GRKIHSFVVKLGLGSC 176

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + ++ SLL+MYAK GD   A+V+F  +  +++ +WN +I+ Y Q                
Sbjct: 177 VPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQ---------------- 220

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                              SG  +     F+ MP   + SWN+M+S YSQ   + EA+ +
Sbjct: 221 -------------------SGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAI 261

Query: 392 FREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           F +M     +KPD  TLA ILS+CA +  L  GKQ+HA  L+  +     V + LI +Y+
Sbjct: 262 FSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYA 321

Query: 451 KCQRNELAE---------------------------------RVFHRIPELDIVCWNSMI 477
           K    E+A                                   +F+++ + D+V W +MI
Sbjct: 322 KSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMI 381

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            G   N L  +A   F+ M      P  ++ A +LS  + L+    G+Q+HA   K G  
Sbjct: 382 VGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGES 441

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN-TVTWNEMIHGYAQNGYGDEAVRLYKD 596
           +   V +ALI MY K G+I  A++ FD+ +GK   V+W  MI   AQ+G G EA+ L++ 
Sbjct: 442 STPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFER 501

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M++ G+KPD IT+V +L+AC+H GLV+ G + +N M   H +EP L HY CMID  GRAG
Sbjct: 502 MLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAG 561

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              EA + I+ MP + D + W  LL+SC++H N  LAK AAE L  +DP NS  Y  LAN
Sbjct: 562 LLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALAN 621

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +YS+ G+W++    R+LM +  + K+   S
Sbjct: 622 VYSACGKWENAAQTRKLMKDRGVRKEKGIS 651



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 164/620 (26%), Positives = 288/620 (46%), Gaps = 107/620 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H  I++ GL    +L N L+  Y+K  +   A H+FD+MP K  +SWN ++S   
Sbjct: 28  AGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYA 87

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K  + E + +L  EMP+ + VSW  +I    + GL + A+ ++ KM +E   P+  T+++
Sbjct: 88  KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------------- 169
           V  +  A   ++ GR+ H  V+K+GL   + VA +LL++YAKCG                
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207

Query: 170 ---WT------------KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              W             + A   FE+M + + V++ +M+SG ++    +EAL +F  M+ 
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267

Query: 215 K-AVSIDSVSLSSVLGVCAR-EGCGVESDVFA---QSDNKFSRNV-----------HGQQ 258
           + ++  D+ +L+S+L  CA  E   +   + A   +++ + S  V            G +
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327

Query: 259 VHCLTIKLGFEADLHLS--NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +  L ++    ++L++    SLLD Y K G++  A  IF+ L +R VV+W  MI GY Q 
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387

Query: 317 YQSTKAIELLQRMKSCGFEPDEVT----------------------------------SI 342
                A+EL + M + G EP+  T                                    
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447

Query: 343 NMLVAC-VRSGDIKTGREMFDSMPS--PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           N L+A   ++G+I   + +FD +P+    + SW +M+ + +Q    KEAI LF  M   G
Sbjct: 448 NALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG 506

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH-----IDNYVASGLIGIYSKCQR 454
           +KPD  T   +LS+C  +G++E G++ +  ++ T  H     + +Y    +I +Y +   
Sbjct: 507 MKPDHITYVGVLSACTHVGLVEQGRKYY--NMMTEVHEIEPTLSHYAC--MIDLYGRAGL 562

Query: 455 NELAERVFHRIP-ELDIVCWNSMIAGLS------LNSLDIEAFMFFKQMRQNEMYPTQFS 507
            + A      +P E D + W S++A         L  +  E  +               +
Sbjct: 563 LQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSG----AYLA 618

Query: 508 FATVLSSCAKLSSSFQGRQV 527
            A V S+C K  ++ Q R++
Sbjct: 619 LANVYSACGKWENAAQTRKL 638


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 225/776 (28%), Positives = 372/776 (47%), Gaps = 81/776 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA ++ N +  D++   R++ +Y+ C +      +F                    
Sbjct: 54  GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF-------------------- 93

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  Y+L  ++   ++  WN++IS+ VRNGL  +AL+ Y KM   G  P   T   +
Sbjct: 94  -------YRL--DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCL 144

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA  AL + +        V  +G+D N +VA++L+  Y + G       +F+ + + + 
Sbjct: 145 VKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDC 204

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +  M++G AK   +   ++ F +M    +S ++V+   VL VCA +   +  D+    
Sbjct: 205 VIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASK---LLIDL---- 257

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q+H L +  G + +  + NSLL MY+K G  D A  +F  +     V+W
Sbjct: 258 ---------GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTW 308

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV-------------------- 346
           N MI+GY Q     +++     M S G  PD +T  ++L                     
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMR 368

Query: 347 ---------------ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                          A  +   +   + +F    S  V  + AM+S Y  +  + +++++
Sbjct: 369 HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEM 428

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           FR +    + P+  TL  IL     +  L+ G+++H   +K        +   +I +Y+K
Sbjct: 429 FRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAK 488

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C R  LA  +F R+ + DIV WNSMI   + +     A   F+QM  + +     S +  
Sbjct: 489 CGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAA 548

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS+CA L S   G+ +H  + K    +D++  S LI+MY KCG++  A   F  M  KN 
Sbjct: 549 LSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMI-ASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           V+WN +I     +G   +++ L+ +M+  SG++PD ITF+ I+++C H G VD GV  F 
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR 668

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM  D+G++P  +HY C++D  GRAG   EA   +  MP   D  +W  LL +CRLH NV
Sbjct: 669 SMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNV 728

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LA+ A+ +L  LDP NS  Y L++N +++   W+ +  VR LM E  + K P YS
Sbjct: 729 ELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYS 784



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 145/616 (23%), Positives = 273/616 (44%), Gaps = 59/616 (9%)

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
           E  +P  ++L  + +A +    +  G++ H  +I   +  + Y    +L +YA CG    
Sbjct: 31  EETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSD 88

Query: 174 AVPVFE--EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
              +F   ++   +   + +++S   +   + +AL  +  M+   VS D  +   ++  C
Sbjct: 89  CGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK-LGFEADLHLSNSLLDMYAKNGDMDS 290
                               +N  G      T+  LG + +  +++SL+  Y + G +D 
Sbjct: 149 VAL-----------------KNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDV 191

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
              +F  + ++  V WNVM+ GY +       I+    M+     P+ VT   +L  C  
Sbjct: 192 PSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCAS 251

Query: 351 S---------------------GDIKT---------GR-----EMFDSMPSPSVSSWNAM 375
                                 G IK          GR     ++F  M      +WN M
Sbjct: 252 KLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCM 311

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +S Y QS   +E++  F EM   GV PD  T + +L S +    LE  KQ+H   ++ + 
Sbjct: 312 ISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSI 371

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
            +D ++ S LI  Y KC+   +A+ +F +   +D+V + +MI+G   N L I++   F+ 
Sbjct: 372 SLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRW 431

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           + + ++ P + +  ++L     L +   GR++H  I K G+ N   +G A+I+MY KCG 
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGR 491

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  A + F+ +  ++ V+WN MI   AQ+     A+ +++ M  SG+  D ++  A L+A
Sbjct: 492 MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSA 551

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           C++      G  I   M + H +   +   + +ID   + G+   A  +   M  K + V
Sbjct: 552 CANLPSESFGKAIHGFM-IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIV 609

Query: 676 IWEVLLSSCRLHANVR 691
            W  ++++C  H  ++
Sbjct: 610 SWNSIIAACGNHGKLK 625


>gi|226530385|ref|NP_001145846.1| CRR4 [Zea mays]
 gi|219884683|gb|ACL52716.1| unknown [Zea mays]
 gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
          Length = 601

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 196/572 (34%), Positives = 301/572 (52%), Gaps = 55/572 (9%)

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F+ +  P      A +S L+K     E +E    + R+  +I S  +  VL  CA    
Sbjct: 34  LFDAVPRPTAALCCAFVSVLSKLSLHQELIEAVSSLHRRGGAIPSGCIPLVLKSCALSAA 93

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
             +                G Q HC  +  G   D+ +  +L+D YAKNG+MDSA + F 
Sbjct: 94  SCQ----------------GTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFE 137

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            +P +  +  N +I GY                                    RSGD++ 
Sbjct: 138 EMPIKDPIPMNCLITGYS-----------------------------------RSGDVEE 162

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R +FDSMP  + +SWN+M++ Y+     +EA+ LF +M   G  P+  T+  + S CA 
Sbjct: 163 ARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNAITITTVFSICAK 222

Query: 417 MGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
            G LE+G++  A +  +   + N +  + L+ +Y KC+  + A R F R+P  D+V W++
Sbjct: 223 TGDLETGRR--AKAWVSEEDLQNVIVHTALMEMYVKCRAIDEARREFDRMPRRDVVAWST 280

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MIAG S N    E+   F++M+     P + +   VLS+CA+L S   G Q+ + IE   
Sbjct: 281 MIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGSYIESQT 340

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
                ++GSALI+MY KCG +  AR  F  M  K  + WN MI G A NG+ ++A+ LY 
Sbjct: 341 LPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYG 400

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD-HGVEPILDHYTCMIDCLGR 654
           +M+  GV+P++ITF+A+LTAC+H+GLVD G+  F  M+ +     P ++H  C++D L +
Sbjct: 401 EMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEHCACIVDLLCK 460

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           +G   EA   I +M  + + VIW  LLS+CR HA+V LAK AA +L  L+P +S+ Y LL
Sbjct: 461 SGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVLEPNSSSIYVLL 520

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +NIY+  G W D+R +R+LM    + K  AYS
Sbjct: 521 SNIYADAGLWGDVREIRDLMRSKNLQKLSAYS 552



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 202/428 (47%), Gaps = 26/428 (6%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A   G   H H L  G+  D F+   L++ Y+K  N  SA   F++MP KD    N +++
Sbjct: 93  ASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKDPIPMNCLIT 152

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              +S D+E A +LFD MP +   SWN++I+     G  ++AL+++++M  EG  P  IT
Sbjct: 153 GYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNAIT 212

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + +VF       D+E GRR    V +  L +N+ V  AL+ +Y KC     A   F+ M 
Sbjct: 213 ITTVFSICAKTGDLETGRRAKAWVSEEDL-QNVIVHTALMEMYVKCRAIDEARREFDRMP 271

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + V ++ M++G +   R  E+LE+F  M       + V+L  VL  CA+ G    SD 
Sbjct: 272 RRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLG----SDE 327

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+Q+             +L ++L+DMY K G +  A  +F  + ++ 
Sbjct: 328 L------------GEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKV 375

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           V++WN MI G      +  AI L   M   G +P+E+T + +L AC  +G +  G   F 
Sbjct: 376 VIAWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQ 435

Query: 363 SM------PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            M       SP V     ++    +S    EA K   +M+   V+P+      +LS+C A
Sbjct: 436 EMKKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFICDME---VEPNAVIWTTLLSACRA 492

Query: 417 MGILESGK 424
              +E  K
Sbjct: 493 HADVELAK 500



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 158/349 (45%), Gaps = 35/349 (10%)

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +  R +FD++P P+ +   A +S  S+   H+E I+    +  RG       + ++L SC
Sbjct: 29  RAARHLFDAVPRPTAALCCAFVSVLSKLSLHQELIEAVSSLHRRGGAIPSGCIPLVLKSC 88

Query: 415 AAMGILESGKQVHAASL---------KTASHIDNYVASG--------------------- 444
           A       G Q H  +L            + +D Y  +G                     
Sbjct: 89  ALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKDPIPMN 148

Query: 445 -LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            LI  YS+    E A R+F  +P      WNSMIA  +      EA   F QM +    P
Sbjct: 149 CLITGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASP 208

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              +  TV S CAK      GR+  A + ++   N + V +AL+EMY KC  I  AR+ F
Sbjct: 209 NAITITTVFSICAKTGDLETGRRAKAWVSEEDLQN-VIVHTALMEMYVKCRAIDEARREF 267

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D M  ++ V W+ MI GY+ NG   E++ L++ M A+  KP+++T V +L+AC+  G  +
Sbjct: 268 DRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDE 327

Query: 624 VGVEIFNSMQLDHGVEPILDHY-TCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +G +I +   ++    P+  +  + +ID   + GH   A  +   M  K
Sbjct: 328 LGEQIGS--YIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQK 374



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 143/655 (21%), Positives = 254/655 (38%), Gaps = 172/655 (26%)

Query: 32  LYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
           L S  +   +A+HLFD +P        A +S   K         L  E+ E         
Sbjct: 21  LLSDASTYRAARHLFDAVPRPTAALCCAFVSVLSK-------LSLHQELIEA-------- 65

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           +S+L R G               G +P  +   ++  AS           CH LV   G+
Sbjct: 66  VSSLHRRG----------GAIPSGCIPLVLKSCALSAASCQGTQTH----CHALV--RGM 109

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV--------- 202
             +++V  AL+  YAK G    AV  FEEM   + +    +++G +++  V         
Sbjct: 110 LGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKDPIPMNCLITGYSRSGDVEEARRLFDS 169

Query: 203 ----------------------VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG---CG 237
                                  EAL +F  M+R+  S +++++++V  +CA+ G    G
Sbjct: 170 MPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNAITITTVFSICAKTGDLETG 229

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
             +  +   ++  +  VH                     +L++MY K   +D A   F  
Sbjct: 230 RRAKAWVSEEDLQNVIVH--------------------TALMEMYVKCRAIDEARREFDR 269

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
           +P R VV+W+ MIAGY    +  +++EL +RMK+   +P+EVT + +L AC         
Sbjct: 270 MPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELG 329

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      + G +   R++F  M    V +WN+M+   + +
Sbjct: 330 EQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALN 389

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
              ++AI L+ EM   GV+P+  T   +L++C   G+++ G        K   H      
Sbjct: 390 GFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHA----- 444

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
                          + +V H    +D++C +  +          EA+ F   M   E+ 
Sbjct: 445 ---------------SPQVEHCACIVDLLCKSGRL---------WEAYKFICDM---EVE 477

Query: 503 PTQFSFATVLSSC-----AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           P    + T+LS+C      +L+    G+ V   +E +   + I+V   L  +Y   G   
Sbjct: 478 PNAVIWTTLLSACRAHADVELAKLAAGKLV--VLEPNS--SSIYV--LLSNIYADAGLWG 531

Query: 558 GARQFFDMMHGKN-----TVTWNEM---IHGY-AQNGYGDEAVRLYKDMIASGVK 603
             R+  D+M  KN       +W E+   +H +  Q+ Y   +  +Y  +   G++
Sbjct: 532 DVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQ 586


>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 675

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 220/720 (30%), Positives = 345/720 (47%), Gaps = 125/720 (17%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +L    +S  +  A  LFDEMPERN  SWN +I   + +G +  +L  ++ M      
Sbjct: 46  NHLLQIYSRSGKMGIARNLFDEMPERNYFSWNTMIEGYMNSGDKGTSLRFFDMMP----- 100

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
                                             +++ Y  N ++S +AK G    A  +
Sbjct: 101 ----------------------------------ERDGYSWNVVISGFAKAGELSVARRL 126

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+ M E + VT  +++ G        EAL +F+ +     S D+++L++VL  CA     
Sbjct: 127 FDAMPEKDVVTLNSLLHGYILNGYSEEALRLFKEL---KFSADAITLTTVLKACA----- 178

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                      +      G+Q+H   +  G E D  +++SL+++YAK GD+  A  +   
Sbjct: 179 -----------ELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQ 227

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           + E    S + +I+GY                                      G +   
Sbjct: 228 IGEPDDHSLSTLISGYAN-----------------------------------CGRVNES 252

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R +FD   +  V  WN+M+S Y  +    EA+ LF EM+      D  TLA ++++C  +
Sbjct: 253 RRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMR-NETWEDSRTLAAVINACIGL 311

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ------------------------ 453
           G LE+GKQ+H  + K     D  VAS L+ +YSKC                         
Sbjct: 312 GFLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMI 371

Query: 454 -------RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
                  R + A+RVF RI    ++ WNSM  G S N   +E   +F QM + ++   + 
Sbjct: 372 KVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDLPTDEV 431

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           S ++V+S+CA +SS   G QV A+    G  +D  V S+LI++YCKCG +   R+ FD M
Sbjct: 432 SLSSVISACASISSLGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTM 491

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
              + V WN MI GYA NG+G EA+ L+K M  +G++P  ITF+ +LTAC++ GLV+ G 
Sbjct: 492 VKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGR 551

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
            +F +M+LDHG  P  +H++CM+D L RAG+  EA  L++EMP   D  +W  +L  C  
Sbjct: 552 LLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVLRGCVA 611

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +    + K+ AE++  L+P+NS  Y  L+ I+++ G W+    VR+LM EN + K+P  S
Sbjct: 612 NGYKAMGKKVAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVSKNPGSS 671



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 259/573 (45%), Gaps = 123/573 (21%)

Query: 14  ILRNGLFDDT-----FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           I RN LFD+      F  N +IE Y    +  ++   FD MP +D YSWN ++S   K+ 
Sbjct: 60  IARN-LFDEMPERNYFSWNTMIEGYMNSGDKGTSLRFFDMMPERDGYSWNVVISGFAKAG 118

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
           +L  A +LFD MPE++VV+ N+L+   + NG  E+AL ++ ++    F    ITL +V K
Sbjct: 119 ELSVARRLFDAMPEKDVVTLNSLLHGYILNGYSEEALRLFKELK---FSADAITLTTVLK 175

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           A   L  ++ G++ H  ++  G++ +  + ++L+++YAKCG  + A  + E++ EP++ +
Sbjct: 176 ACAELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIGEPDDHS 235

Query: 189 FTAMMSGLAKTDRVVEALEMF-----RLMI-------------------------RKAVS 218
            + ++SG A   RV E+  +F     R +I                         R    
Sbjct: 236 LSTLISGYANCGRVNESRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMRNETW 295

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            DS +L++V+  C   G       F ++         G+Q+HC   K G   D+ ++++L
Sbjct: 296 EDSRTLAAVINACIGLG-------FLET---------GKQMHCHACKFGLVDDIVVASTL 339

Query: 279 LDMYAKNGD-------------------------------MDSAEVIFSNLPERSVVSWN 307
           LDMY+K G                                +D A+ +F  +  +S++SWN
Sbjct: 340 LDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWN 399

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------------ 349
            M  G+ Q     + +E   +M       DEV+  +++ AC                   
Sbjct: 400 SMTNGFSQNGCPVETLEYFSQMHKLDLPTDEVSLSSVISACASISSLGLGEQVFARATIV 459

Query: 350 -----------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                            + G ++ GR +FD+M       WN+M+S Y+ + +  EAI LF
Sbjct: 460 GLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISGYATNGHGFEAIDLF 519

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQV-HAASLKTASHIDNYVASGLIGIYSK 451
           ++M   G++P + T  ++L++C   G++E G+ +  A  L      D    S ++ + ++
Sbjct: 520 KKMSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFVPDKEHFSCMVDLLAR 579

Query: 452 CQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
               E A  +   +P + D   W+S++ G   N
Sbjct: 580 AGYVEEAIDLVEEMPFDADASMWSSVLRGCVAN 612



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 219/456 (48%), Gaps = 56/456 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA IL  G+  D+ + + L+ +Y+KC +   A ++ +++   D +S + ++S    
Sbjct: 186 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIGEPDDHSLSTLISGYAN 245

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +  + +LFD    R V+ WN++IS  + N ++ +AL ++N+M NE +  +  TLA+V
Sbjct: 246 CGRVNESRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMRNETWEDSR-TLAAV 304

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP---------- 176
             A   L  +E G++ H    K GL  +I VA+ LL +Y+KCG    A            
Sbjct: 305 INACIGLGFLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDT 364

Query: 177 ---------------------VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
                                VFE +   + +++ +M +G ++    VE LE F  M + 
Sbjct: 365 ILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKL 424

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            +  D VSLSSV+  CA                  S    G+QV      +G ++D  +S
Sbjct: 425 DLPTDEVSLSSVISACA----------------SISSLGLGEQVFARATIVGLDSDQIVS 468

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           +SL+D+Y K G +++   +F  + +   V WN MI+GY       +AI+L ++M   G  
Sbjct: 469 SSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAGIR 528

Query: 336 PDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIK 390
           P ++T + +L AC   G ++ GR +F++M       P    ++ M+   +++   +EAI 
Sbjct: 529 PTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAID 588

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           L  EM F     D +  + +L  C A G    GK+V
Sbjct: 589 LVEEMPF---DADASMWSSVLRGCVANGYKAMGKKV 621



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 165/354 (46%), Gaps = 24/354 (6%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +H H  + GL DD  + + L+++YSKC +   A  LF ++   D    N+++    
Sbjct: 316 TGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYF 375

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               ++ A ++F+ +  ++++SWN++ +   +NG   + L  +++M         ++L+S
Sbjct: 376 SCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDLPTDEVSLSS 435

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A  ++  +  G +       +GLD +  V+++L+ LY KCG  ++   VF+ M + +
Sbjct: 436 VISACASISSLGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSD 495

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           EV + +M+SG A      EA+++F+ M    +    ++   VL  C   G   E  +  +
Sbjct: 496 EVPWNSMISGYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFE 555

Query: 246 S---DNKF--------------SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG-- 286
           +   D+ F              +R  + ++   L  ++ F+AD  + +S+L     NG  
Sbjct: 556 AMKLDHGFVPDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVLRGCVANGYK 615

Query: 287 --DMDSAEVIFSNLPERSV--VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
                 AE I    PE SV  V  + + A  G  ++S+  +  L R  +    P
Sbjct: 616 AMGKKVAEKIIELEPENSVAYVQLSAIFATSGD-WESSALVRKLMRENNVSKNP 668



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 18/233 (7%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI-FVGSALIEMYCKCGDIYGARQFFDMM 566
           +  +L SC+  +     RQ +    K G+++ I  V + L+++Y + G +  AR  FD M
Sbjct: 9   YVRLLQSCSNRNRETLWRQTNGLFLKKGFISSIVIVANHLLQIYSRSGKMGIARNLFDEM 68

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             +N  +WN MI GY  +G    ++R + DM+    + D  ++  +++  + +G + V  
Sbjct: 69  PERNYFSWNTMIEGYMNSGDKGTSLRFF-DMMP---ERDGYSWNVVISGFAKAGELSVAR 124

Query: 627 EIFNSMQLDHGV--EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
            +F++M     V    +L  Y          G+  EA  L  E+    D +    +L +C
Sbjct: 125 RLFDAMPEKDVVTLNSLLHGYIL-------NGYSEEALRLFKELKFSADAITLTTVLKAC 177

Query: 685 -RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
             L A  R  +  A+ L      +S   S L N+Y+  G   DLR    ++ +
Sbjct: 178 AELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCG---DLRMASYMLEQ 227


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 245/783 (31%), Positives = 377/783 (48%), Gaps = 84/783 (10%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++    G  +HA   + GL  + ++   L+ LY       S +H+ D             
Sbjct: 57  EEGRACGAAIHALTQKAGLMVNVYIGTALLHLYG------SQKHVLD------------- 97

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
                       A +LF EMPERNVVSW  L+ AL  NG  E+AL  Y +M  E      
Sbjct: 98  ------------AQRLFWEMPERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNA 145

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
              A+V     +L D   G +    VI  GL + + VAN+L+S+    G    A  +F  
Sbjct: 146 NAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYR 205

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVE 239
           M E + V++ A++S  +      ++  +F  M R  +   D+ +L S++ VCA       
Sbjct: 206 MEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCA------S 259

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           SD  +          +G  VH L ++ G  + + + N+L++MY+  G +  AE +F N+ 
Sbjct: 260 SDYVS----------YGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMS 309

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR- 358
            R ++SWN MI+ Y Q   +  A++ L ++      PD +T  + L AC   G +  GR 
Sbjct: 310 RRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRM 369

Query: 359 ----------------------------------EMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                              +F  MP+  V S N ++ SY+  E+
Sbjct: 370 VHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLED 429

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES-GKQVHAASLKTASHIDNYVAS 443
             +A+++F  M+   VK +  T+  IL S  +   L + G  +HA ++      D+YV++
Sbjct: 430 GTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSN 489

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            LI +Y+KC   E +  VF RI    +V WN+MIA    +    E+   F  MR +    
Sbjct: 490 SLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGL 549

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
                A  +SS A L+S  +G Q+H    K G  ND  V +A ++MY KCG +    +  
Sbjct: 550 DHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKML 609

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
                +    WN +I GYA+ GY  EA   +K MI+ G  PD +TFV +L+ACSH+GLVD
Sbjct: 610 PDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVD 669

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G++ +NSM    GV P + H  C++D LGR G F EAE  I++MP   + +IW  LLSS
Sbjct: 670 KGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSS 729

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
            R H N+ + ++AA+ L  LDP + + Y LL+N+Y++  RW D+  VR  M    + K P
Sbjct: 730 SRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINLNKIP 789

Query: 744 AYS 746
           A S
Sbjct: 790 ACS 792



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 182/674 (27%), Positives = 308/674 (45%), Gaps = 84/674 (12%)

Query: 80  MPE--RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVE 137
           MP+  R   SW   IS  VR G +  A S+   M   G   +   LAS+    TA    E
Sbjct: 1   MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLV---TACERWE 57

Query: 138 HGRRC----HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
            GR C    H L  K GL  N+Y+  ALL LY        A  +F EM E N V++TA+M
Sbjct: 58  EGRACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALM 117

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
             L+    + EAL  +R M R+ ++ ++ + ++V+ +C                      
Sbjct: 118 VALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCG----------------SLEDE 161

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
           V G QV    I  G +  + ++NSL+ M    G +  AE +F  + ER  VSWN +++ Y
Sbjct: 162 VAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMY 221

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-----------------CVRS----- 351
             +   +K+  +   M+  G    + T++  L++                 C+R+     
Sbjct: 222 SHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSY 281

Query: 352 --------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                         G +     +F +M    + SWN M+SSY Q+ N+ +A+K   ++  
Sbjct: 282 IPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLH 341

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
               PDR T +  L +C++ G L  G+ VHA +L+ + H +  V + LI +Y KC   E 
Sbjct: 342 TNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIED 401

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           AER+F  +P  D+V  N +I   ++     +A   F  MR+ E+   + ++ T+++    
Sbjct: 402 AERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEV---KLNYITIVNILGS 458

Query: 518 LSSSFQ----GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
            +SS      G  +HA     G+++D +V ++LI MY KCGD+  +   F  +  ++ V+
Sbjct: 459 FTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVS 518

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN MI    Q+G+G+E+++L+ DM   G   D I     +++ +    ++ G+++ + + 
Sbjct: 519 WNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQL-HGLG 577

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI-----WEVLLSSCRLHA 688
           L  G+          +D  G+ G   E   ++  +P   DP I     W  L+S    + 
Sbjct: 578 LKCGLGNDSHVVNAAMDMYGKCGKMDE---MLKMLP---DPAIRPQQCWNTLISGYARYG 631

Query: 689 NVRLAKRAAEELFR 702
                 + AEE F+
Sbjct: 632 YF----KEAEETFK 641


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 213/664 (32%), Positives = 341/664 (51%), Gaps = 57/664 (8%)

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL---YAKCGWTKHAVPVFEEM 181
           S+ +  T+   + + ++ H   I +GL  + Y  + L SL   YA  G   HA  +F+E+
Sbjct: 23  SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDEL 82

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI-DSVSLSSVLGVCAREGCGVES 240
             P+  ++ AM+     +    +AL +F  M+       D+ +   V+  C         
Sbjct: 83  RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACG-------- 134

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                    +     G  +H  T+  GF++D  + NSL+ MY   G+M+ A  +F  + E
Sbjct: 135 --------DYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRE 186

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE- 359
           R++VSWN MI GY +     +A+ +   M   G EPD  T +++L  C    +++ GR  
Sbjct: 187 RTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRV 246

Query: 360 ----------------------------------MFDSMPSPSVSSWNAMLSSYSQSENH 385
                                             +F  M    V SW  M++ Y  + + 
Sbjct: 247 HALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDA 306

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           + A+ L + MQF  VKP+  TLA +LS+CA++  L+ G+ +H  +++     +  V + L
Sbjct: 307 RSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETAL 366

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +Y+KC    L+ RVF +  +     WN++I+G   N L  +A   FKQM    + P  
Sbjct: 367 IDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPND 426

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +  ++L + A L+   Q R +H  + + G+++ I V + LI++Y KCG +  A   F+ 
Sbjct: 427 ATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNG 486

Query: 566 M--HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           +    K+ +TW+ +I GY  +G+G+ A+ L+  M+ SGVKP++ITF +IL ACSH+GLVD
Sbjct: 487 IPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVD 546

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G+ +F  M  D+ +    DHYTC+ID LGRAG   EA  LI  M  + +  +W  LL S
Sbjct: 547 EGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGS 606

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           C +H NV L + AA+ LF L+P N+  Y LLANIYS++GRW D   VR +M+   + K P
Sbjct: 607 CVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTP 666

Query: 744 AYSL 747
           A+SL
Sbjct: 667 AHSL 670



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 230/482 (47%), Gaps = 54/482 (11%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF-VPTHITLASVFKAST 131
           A KLFDE+   ++ SWN +I     +GL   AL ++ +M   G   P + T   V KA  
Sbjct: 75  ARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACG 134

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
             L  E G   H   +  G D + +V N+L+++Y  CG  + A  VF+ M E   V++  
Sbjct: 135 DYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNT 194

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           M++G  K   V EAL +F  MI K +  D  ++ SVL VC+      E +V         
Sbjct: 195 MINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLK---ELEV--------- 242

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G++VH L        D+ + NSLLDMYAK G+MD A++IF  + +R VVSW  M+ 
Sbjct: 243 ----GRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMN 298

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------------- 358
           GY     +  A+ L Q M+    +P+ VT  ++L AC     +K GR             
Sbjct: 299 GYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLES 358

Query: 359 ----------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                  +F        + WNA++S    +   ++AI+LF++M 
Sbjct: 359 EVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQML 418

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
              V P+  TL  +L + A +  L+  + +H   +++       VA+ LI IYSKC   E
Sbjct: 419 MEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLE 478

Query: 457 LAERVFHRIP--ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            A  +F+ IP  + DI+ W+++IAG  ++     A   F QM Q+ + P + +F ++L +
Sbjct: 479 SAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHA 538

Query: 515 CA 516
           C+
Sbjct: 539 CS 540



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 210/419 (50%), Gaps = 31/419 (7%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +DI  WN++L    K  +++ A  +F EM +R+VVSW  +++  + NG    AL +   M
Sbjct: 257 EDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMM 316

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
             E   P  +TLASV  A  +L  ++HGR  HG  I+  L+  + V  AL+ +YAKC   
Sbjct: 317 QFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNV 376

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             +  VF + S+     + A++SG        +A+E+F+ M+ +AV  +  +L+S+L   
Sbjct: 377 NLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAY 436

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A             +D + +RN+HG       I+ GF + + ++  L+D+Y+K G ++SA
Sbjct: 437 A-----------FLTDLQQARNMHGY-----LIRSGFLSRIEVATILIDIYSKCGSLESA 480

Query: 292 EVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
             IF+ +P  ++ +++W+ +IAGYG       AI L  +M   G +P+E+T  ++L AC 
Sbjct: 481 HNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACS 540

Query: 350 RSGDIKTGREMF-----DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
            +G +  G  +F     D+  S     +  ++    ++   +EA +L R M FR   P+ 
Sbjct: 541 HAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFR---PNH 597

Query: 405 TTLAIILSSCAAMGILESGKQVHAASL--KTASHIDNYVASGLIGIYSKCQRNELAERV 461
                +L SC     +E G +V A  L      +  NYV   L  IYS   R   AE V
Sbjct: 598 AVWGALLGSCVIHENVELG-EVAAKWLFELEPGNTGNYVL--LANIYSAVGRWRDAEHV 653



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 215/454 (47%), Gaps = 84/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G L+HA  + +G   D F+ N L+ +Y  C                              
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCG----------------------------- 172

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             ++E A ++FD M ER +VSWN +I+   +NG  ++AL V++ M  +G  P   T+ SV
Sbjct: 173 --EMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSV 230

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               + L ++E GRR H LV    L ++I V N+LL +YAKCG    A  +F EM + + 
Sbjct: 231 LPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDV 290

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T MM+G         AL + ++M  ++V  + V+L+SVL  CA              
Sbjct: 291 VSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACA-------------- 336

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            + +S   HG+ +H   I+   E+++ +  +L+DMYAK  +++ +  +FS   ++    W
Sbjct: 337 -SLYSLK-HGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPW 394

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----------------CVR 350
           N +I+G      S KAIEL ++M     +P++ T  ++L A                 +R
Sbjct: 395 NAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIR 454

Query: 351 S-------------------GDIKTGREMFDSMPS--PSVSSWNAMLSSYSQSENHKEAI 389
           S                   G +++   +F+ +P     + +W+A+++ Y    + + AI
Sbjct: 455 SGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAI 514

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            LF +M   GVKP+  T   IL +C+  G+++ G
Sbjct: 515 SLFDQMVQSGVKPNEITFTSILHACSHAGLVDEG 548



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 6/108 (5%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH--KDIYSWNAILSAQCKS 67
           +H +++R+G      +   LI++YSKC +  SA ++F+ +P   KDI +W+AI++     
Sbjct: 448 MHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMH 507

Query: 68  DDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
              E A  LFD+M +  V    +++ +++ A    GL ++ L ++  M
Sbjct: 508 GHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFM 555


>gi|297800128|ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313784|gb|EFH44207.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 919

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 220/768 (28%), Positives = 392/768 (51%), Gaps = 82/768 (10%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           ++H   +  GL  D+ LCN L+ LY+K                                +
Sbjct: 199 MVHCLAIETGLVSDSSLCNALMNLYAK-------------------------------GE 227

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
           DL  A  +F  M  R++VSWN +++  + NG    +L  +  M   G    ++T + V  
Sbjct: 228 DLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQEADNVTFSCVIS 287

Query: 129 ASTALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           A + L ++  G   HGLVIK G   + ++ VAN+++S+Y+KCG  + A  VFEE+   + 
Sbjct: 288 ACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAAETVFEELLCKDV 347

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS--LSSVLGVCAREGCGVESDVFA 244
           +++ A+++GL+      EA  + + M     S+D +   +S+V+ + +   CG       
Sbjct: 348 ISWNAILNGLSANGMFEEAFGILKEM----QSVDKIQPDISTVVSITSI--CG------- 394

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEAD-LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                F  +  G+ +H  T++   ++  L + NS++DMY K G    AE +F     R +
Sbjct: 395 ----DFCLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTTTHRDL 450

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKS---CG-FEPDEVTSINMLVACVRS-------- 351
           VSWN MI+ + Q   + +A  L + + S   C  F    V +I  L +C  S        
Sbjct: 451 VSWNSMISAFAQNGFTQEAKNLFREVVSEYTCSKFSLSTVLAI--LTSCDSSDSLIFGKS 508

Query: 352 --------GDIKTGREMFDSM-PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG-VK 401
                   GD+ +   + + +  +  ++SWN+++   + S +H E+++ F+ M   G ++
Sbjct: 509 VHCWLQKLGDLTSAFLLLEMIFETRDLTSWNSVIYGCASSGHHLESLRAFQAMSREGKIR 568

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            D  TL   +S+   + ++  G+ +H  ++K+   +D  + + LI +Y +C+  E A +V
Sbjct: 569 HDLITLLGTISASGNLRLVLQGRCLHGLAIKSLRELDTQLQNTLITMYGRCKDTESAVKV 628

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F  I + ++  WN +I+ LS N    E F  F+ ++   + P + +F  +LS+  +L S+
Sbjct: 629 FGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGST 685

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G Q H  + + G+  + FV +AL++MY  CG +    + F     K+   WN +I  Y
Sbjct: 686 SYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVKSISAWNSVISAY 745

Query: 582 AQNGYGDEAVRLYKDMIA--SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
             +G G++A+ L+K+M +  SG++P+  TF+++L+ACSHSG ++ G+  +N M+   GV+
Sbjct: 746 GFHGMGEKAMELFKEMSSGNSGMEPNKSTFISLLSACSHSGFINEGLRYYNQMEEKFGVK 805

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P+ +H  C++D LGRAG   EA   I  +       +W  LLS+C  H + +L    AE 
Sbjct: 806 PVTEHRVCIVDMLGRAGKLKEAYEFIIGIGEPQKAGVWGALLSACNYHGDTKLGTEVAEV 865

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           LF ++P N++ Y  LAN Y  LG WD+   +R+++ +N + K P YS+
Sbjct: 866 LFEMEPDNASYYISLANTYVGLGGWDEAVRLRKIVEDNALKKLPGYSV 913



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 162/626 (25%), Positives = 288/626 (46%), Gaps = 95/626 (15%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D+ + + +L+   ++ DL  +  LF E+ E++V+ WN++I+ L +NG    A+ ++ +M
Sbjct: 110 QDLATSSKLLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITCLNQNGRYIAAVGLFVEM 169

Query: 112 SNEG--FVPTHITLASVFKASTALLDVEHGRRC---HGLVIKIGLDKNIYVANALLSLYA 166
            ++G  F  T + L     A +AL  +   ++C   H L I+ GL  +  + NAL++LYA
Sbjct: 170 IHKGNEFDSTTLLL-----AVSALSSLHLSKKCPMVHCLAIETGLVSDSSLCNALMNLYA 224

Query: 167 KCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS 226
           K      A  VF  M   + V++  +M+          +L  F+ MI      D+V+ S 
Sbjct: 225 KGEDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQEADNVTFSC 284

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS--NSLLDMYAK 284
           V+  C+   C  E  +             G+ +H L IK G+  + H+S  NS++ MY+K
Sbjct: 285 VISACS---CLEELPL-------------GESLHGLVIKSGYSPEAHVSVANSIISMYSK 328

Query: 285 NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC-GFEPDEVTSIN 343
            GD+++AE +F  L  + V+SWN ++ G        +A  +L+ M+S    +PD  T ++
Sbjct: 329 CGDIEAAETVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVS 388

Query: 344 MLVACVRSGDIKTGRE---------------------------------------MFDSM 364
           +   C   GD    RE                                       +F + 
Sbjct: 389 ITSIC---GDFCLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTT 445

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREM--QFRGVKPDRTTLAIILSSCAAMGILES 422
               + SWN+M+S+++Q+   +EA  LFRE+  ++   K   +T+  IL+SC +   L  
Sbjct: 446 THRDLVSWNSMISAFAQNGFTQEAKNLFREVVSEYTCSKFSLSTVLAILTSCDSSDSLIF 505

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           GK VH    K       ++               L E +F      D+  WNS+I G + 
Sbjct: 506 GKSVHCWLQKLGDLTSAFL---------------LLEMIFE---TRDLTSWNSVIYGCAS 547

Query: 483 NSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
           +   +E+   F+ M R+ ++     +    +S+   L    QGR +H    K     D  
Sbjct: 548 SGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLRLVLQGRCLHGLAIKSLRELDTQ 607

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           + + LI MY +C D   A + F ++   N  +WN +I   +QN  G E  +L++++    
Sbjct: 608 LQNTLITMYGRCKDTESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---K 664

Query: 602 VKPDDITFVAILTACSHSGLVDVGVE 627
           ++P++ITFV +L+A +  G    G++
Sbjct: 665 LEPNEITFVGLLSASTQLGSTSYGMQ 690



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 180/763 (23%), Positives = 323/763 (42%), Gaps = 157/763 (20%)

Query: 41  SAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGL 100
           S+   F K+ H+  ++ +++LS    S      Y LFDEMP+R+                
Sbjct: 32  SSNFHFSKIKHERHFT-SSVLSPVTPS-----VYNLFDEMPKRD---------------- 69

Query: 101 EEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANA 160
                       N     + + L  V ++    ++ E  R  H   +K G  +++  ++ 
Sbjct: 70  ------------NRTVEASFMFLRDVLRSFMMRIETETPRSIHCFALKCGFLQDLATSSK 117

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           LL++Y + G    ++ +F E+ E + + + +M++ L +  R + A+ +F  MI K    D
Sbjct: 118 LLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITCLNQNGRYIAAVGLFVEMIHKGNEFD 177

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
           S +L  +L V A             S    S+      VHCL I+ G  +D  L N+L++
Sbjct: 178 STTL--LLAVSA------------LSSLHLSKKC--PMVHCLAIETGLVSDSSLCNALMN 221

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           +YAK  D+ SAE +F+++  R +VSWN ++           ++   + M   G E D VT
Sbjct: 222 LYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQEADNVT 281

Query: 341 SINMLVAC-------------------------------------VRSGDIKTGREMFDS 363
              ++ AC                                      + GDI+    +F+ 
Sbjct: 282 FSCVISACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAAETVFEE 341

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLAIILSSCAAMGILES 422
           +    V SWNA+L+  S +   +EA  + +EMQ    ++PD +T+  I S C    +   
Sbjct: 342 LLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSICGDFCLSRE 401

Query: 423 GKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           G+ +H  +++         V + +I +Y KC     AE +F      D+V WNSMI+  +
Sbjct: 402 GRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTTTHRDLVSWNSMISAFA 461

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATV---LSSCAKLSSSFQGRQVHAQIEKDGYVN 538
            N    EA   F+++  +E   ++FS +TV   L+SC    S   G+ VH  ++K G + 
Sbjct: 462 QNGFTQEAKNLFREV-VSEYTCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLT 520

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
             F+   L+EM               +   ++  +WN +I+G A +G+  E++R ++ M 
Sbjct: 521 SAFL---LLEM---------------IFETRDLTSWNSVIYGCASSGHHLESLRAFQAMS 562

Query: 599 ASG-VKPDDITFVAILTA-----------CSHS----GLVDVGVEIFNSMQLDHG----- 637
             G ++ D IT +  ++A           C H      L ++  ++ N++   +G     
Sbjct: 563 REGKIRHDLITLLGTISASGNLRLVLQGRCLHGLAIKSLRELDTQLQNTLITMYGRCKDT 622

Query: 638 ----------VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS----- 682
                      +P L  + C+I  L +     E   L   +  + + + +  LLS     
Sbjct: 623 ESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQL 682

Query: 683 ---SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
              S  + A+  L +R     F+ +P  SA    L ++YSS G
Sbjct: 683 GSTSYGMQAHCHLIRRG----FQANPFVSAA---LVDMYSSCG 718



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 11/218 (5%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G+ LH   +++    DT L N LI +Y +C +T SA  +F  +   ++ SWN ++SA 
Sbjct: 588 LQGRCLHGLAIKSLRELDTQLQNTLITMYGRCKDTESAVKVFGLISDPNLCSWNCVISAL 647

Query: 65  CKSDDLEFAYKLFDEMP-ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
            ++      ++LF  +  E N +++  L+SA  + G     +  +  +   GF       
Sbjct: 648 SQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS 707

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS- 182
           A++    ++   +E G +    V +    K+I   N+++S Y   G  + A+ +F+EMS 
Sbjct: 708 AALVDMYSSCGMLETGMK----VFRNSGVKSISAWNSVISAYGFHGMGEKAMELFKEMSS 763

Query: 183 -----EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
                EPN+ TF +++S  + +  + E L  +  M  K
Sbjct: 764 GNSGMEPNKSTFISLLSACSHSGFINEGLRYYNQMEEK 801


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 220/690 (31%), Positives = 337/690 (48%), Gaps = 117/690 (16%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            A + + S  + D   GR  H  +IK GL   +Y+ N L++ YAK G  + A  VF+EM 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 183 EPNEVTFTAMMSGLAK------TDRVV-------------------------EALEMFRL 211
             +  ++  ++SG AK      + R++                          A+ MF  
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           MI + V     ++S+VL  CA        D+             G+++H   +KLG  + 
Sbjct: 133 MISERVPPSQFTVSNVLSSCA---ANQTLDI-------------GRKIHSFVVKLGLGSC 176

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + ++ SLL+MYAK GD   A+V+F  +  +++ +WN +I+ Y Q                
Sbjct: 177 VPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQ---------------- 220

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                              SG  +     F+ MP   + SWN+M+S YSQ   + EA+ +
Sbjct: 221 -------------------SGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVI 261

Query: 392 FREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           F +M     +KPD  TLA ILS+CA +  L  GKQ+HA  L+  +     V + LI +Y+
Sbjct: 262 FSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYA 321

Query: 451 KCQRNELAE---------------------------------RVFHRIPELDIVCWNSMI 477
           K    E+A                                   +F+++ + D+V W +MI
Sbjct: 322 KSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMI 381

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            G   N L  +A   F+ M      P  ++ A +LS  + L+    G+Q+HA   K G  
Sbjct: 382 VGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGES 441

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN-TVTWNEMIHGYAQNGYGDEAVRLYKD 596
           +   V +ALI MY K G+I  A++ FD+ +GK   V+W  MI   AQ+G G EA+ L++ 
Sbjct: 442 STPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFER 501

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M++ G+KPD IT+V +L+AC+H GLV+ G + +N M   H +EP L HY CMID  GRAG
Sbjct: 502 MLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAG 561

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              EA + I+ MP + D + W  LL+SC++H N  LAK AAE L  +DP NS  Y  LAN
Sbjct: 562 LLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALAN 621

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +YS+ G+W++    R+LM +  + K+   S
Sbjct: 622 VYSACGKWENAAQTRKLMKDRGVRKEKGIS 651



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 164/620 (26%), Positives = 288/620 (46%), Gaps = 107/620 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H  I++ GL    +L N L+  Y+K  +   A H+FD+MP K  +SWN ++S   
Sbjct: 28  AGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYA 87

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K  + E + +L  EMP+ + VSW  +I    + GL + A+ ++ KM +E   P+  T+++
Sbjct: 88  KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------------- 169
           V  +  A   ++ GR+ H  V+K+GL   + VA +LL++YAKCG                
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207

Query: 170 ---WT------------KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              W             + A   FE+M + + V++ +M+SG ++    +EAL +F  M+ 
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267

Query: 215 K-AVSIDSVSLSSVLGVCAR-EGCGVESDVFA---QSDNKFSRNV-----------HGQQ 258
           + ++  D+ +L+S+L  CA  E   +   + A   +++ + S  V            G +
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327

Query: 259 VHCLTIKLGFEADLHLS--NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +  L ++    ++L++    SLLD Y K G++  A  IF+ L +R VV+W  MI GY Q 
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387

Query: 317 YQSTKAIELLQRMKSCGFEPDEVT----------------------------------SI 342
                A+EL + M + G EP+  T                                    
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447

Query: 343 NMLVAC-VRSGDIKTGREMFDSMPS--PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           N L+A   ++G+I   + +FD +P+    + SW +M+ + +Q    KEAI LF  M   G
Sbjct: 448 NALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG 506

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH-----IDNYVASGLIGIYSKCQR 454
           +KPD  T   +LS+C  +G++E G++ +  ++ T  H     + +Y    +I +Y +   
Sbjct: 507 MKPDHITYVGVLSACTHVGLVEQGRKYY--NMMTEVHEIEPTLSHYAC--MIDLYGRAGL 562

Query: 455 NELAERVFHRIP-ELDIVCWNSMIAGLS------LNSLDIEAFMFFKQMRQNEMYPTQFS 507
            + A      +P E D + W S++A         L  +  E  +               +
Sbjct: 563 LQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSG----AYLA 618

Query: 508 FATVLSSCAKLSSSFQGRQV 527
            A V S+C K  ++ Q R++
Sbjct: 619 LANVYSACGKWENAAQTRKL 638


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 231/776 (29%), Positives = 373/776 (48%), Gaps = 81/776 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA ++ N +  D++   R++ +Y+ C +  +   +F        Y  ++ LS+   
Sbjct: 50  GKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMF--------YRLDSRLSS--- 98

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             +  WN++IS+ VR GL  +AL+ Y KM   G  P   T   +
Sbjct: 99  ------------------IRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCL 140

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA  AL + +        V  +G+D N +VA++L+  Y + G    A  +F+ + + + 
Sbjct: 141 VKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDC 200

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +  M++G AK       ++ F LM    +S ++V+   VL VCA +   +  D+    
Sbjct: 201 VIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASK---LLIDL---- 253

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q+H L +  G + +  + NSLL MY+K G  D A  +F  +     V+W
Sbjct: 254 ---------GVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTW 304

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N MI+GY Q     +++     M S G  PD +T  ++L +  +  +++  R++      
Sbjct: 305 NCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMR 364

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F    S  V  + AM+S Y  +  + +A+++
Sbjct: 365 HSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEM 424

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           FR +    + P+  TL  IL     +  L+ G+++H   +K        +   +I +Y+K
Sbjct: 425 FRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAK 484

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C R  LA  +F R+ + DIV WNSMI   + +     A   F+QM  + +     S +  
Sbjct: 485 CGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAA 544

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS+CA L S   G+ +H  + K     D++  S LI+MY KCG++  A   FD M  KN 
Sbjct: 545 LSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNI 604

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMI-ASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           V+WN +I  Y  +G   +++ L+ +M+  SG +PD ITF+ I++ C H G VD GV  F 
Sbjct: 605 VSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFR 664

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM  D+G++P  +HY C++D  GRAG   EA   +  MP   D  +W  LL + RLH NV
Sbjct: 665 SMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNV 724

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LAK A+  L  LDP NS  Y L++N +++ G W+ +  VR LM E  + K P YS
Sbjct: 725 ELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYS 780



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 153/318 (48%), Gaps = 13/318 (4%)

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           S+SS       Y +S   + + +   E       P R  L+++L  C+ + +L  GKQVH
Sbjct: 2   SISSVAKRFVPYKKSLPLRNSYRFLEE-----TLPRR--LSLLLQDCSNLTLLRQGKQVH 54

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL--DIVCWNSMIAGLSLNSL 485
           A  +      D+Y    ++G+Y+ C       ++F+R+      I  WNS+I+      L
Sbjct: 55  AFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGL 114

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ-VHAQIEKDGYVNDIFVGS 544
             +A  F+ +M    + P   +F  ++ +C  L  +F+G + +   +   G   + FV S
Sbjct: 115 LNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL-KNFKGIEFLSDTVSSLGMDCNEFVAS 173

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
           +LI+ Y + G I  A + FD +  K+ V WN M++GYA+ G  D  ++ +  M    + P
Sbjct: 174 SLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISP 233

Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEML 664
           + +TF  +L+ C+   L+D+GV++ + + +  G++        ++    + G F +A  L
Sbjct: 234 NAVTFDCVLSVCASKLLIDLGVQL-HGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKL 292

Query: 665 IDEMPCKDDPVIWEVLLS 682
              M  + D V W  ++S
Sbjct: 293 F-RMMSRADTVTWNCMIS 309


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 198/612 (32%), Positives = 318/612 (51%), Gaps = 60/612 (9%)

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
           ++ N LL+ Y K G    A  VF+    PN  T+ A++S LA    + +   +F  M ++
Sbjct: 42  HLLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQR 101

Query: 216 AVSIDSVSLSSVL------GVCAREGCGVESDVFAQSDNKFSR---------------NV 254
               D+VS ++V+      G  AR      + + A S  + SR                 
Sbjct: 102 ----DTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRA 157

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+Q HC  ++LGF  +  + + L+ MYAK G +  A+ +F  +  ++VV +N MI G  
Sbjct: 158 LGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGL- 216

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNA 374
                                             +R   ++  R +F+ M      +W  
Sbjct: 217 ----------------------------------LRCKMVEEARRLFEVMTDRDCITWTT 242

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M++ ++Q+    +A+  FR M+F+G+  D+ T   IL++C A+  LE GKQ+HA  ++T 
Sbjct: 243 MVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTH 302

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              + +V S L+ +YSKC+  + AE  F R+   +I+ W ++I G   N    EA   F 
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFS 362

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           +M+++ + P  F+  +V+SSCA L+S  +G Q H      G ++ I V +AL+ +Y KCG
Sbjct: 363 EMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
            I  A + FD M   + V+W  ++ GYAQ G   E + L++ M+A  VKPD +TF+ +L+
Sbjct: 423 SIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLS 482

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           ACS +G V+ G   F+SMQ DHG+ PI DHYTCMID   R+G   EAE  I +MP   D 
Sbjct: 483 ACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDA 542

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           + W  LLS+CRL  ++ + + AAE L  +DP+N A Y LL +++++ G W+ +  +R  M
Sbjct: 543 IGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGM 602

Query: 735 SENCIVKDPAYS 746
            +  + K+P  S
Sbjct: 603 RDRQVKKEPGCS 614



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 214/423 (50%), Gaps = 24/423 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  H  ILR G   + F+ + L+ +Y+K      A+ +FD+M  K++  +N +++   +
Sbjct: 159 GRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLR 218

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A +LF+ M +R+ ++W  +++   +NGLE +AL+ + +M  +G      T  S+
Sbjct: 219 CKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSI 278

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  AL  +E G++ H  +I+   D N++V +AL+ +Y+KC   K A   F  MS  N 
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNI 338

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TA++ G  +     EA+ +F  M R  +  D  +L SV+  CA      E       
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEE------- 391

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q HCL +  G    + +SN+L+ +Y K G ++ A  +F  +     VSW
Sbjct: 392 ---------GAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSW 442

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             ++ GY Q  ++ + I+L ++M +   +PD VT I +L AC R+G ++ G   F SM  
Sbjct: 443 TALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQK 502

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  M+  YS+S   KEA +  ++M    + PD      +LS+C   G +E
Sbjct: 503 DHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMP---MHPDAIGWGTLLSACRLRGDME 559

Query: 422 SGK 424
            G+
Sbjct: 560 IGQ 562



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 253/560 (45%), Gaps = 93/560 (16%)

Query: 2   KAHVAGKLLHAHILRNGLFDD-TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           + H AG L H  ILR       T L N L+  Y K      A+ +FD  PH +++++NA+
Sbjct: 20  EPHAAGAL-HCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNAL 78

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG--FVP 118
           LS    +  L+    LF  M +R+ VS+N +I+     G   +A+ +Y+ +   G    P
Sbjct: 79  LSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRP 138

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
           + IT++++  A++AL D   GR+ H  ++++G   N +V + L+ +YAK G    A  VF
Sbjct: 139 SRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVF 198

Query: 179 EEMSEPNEVTFTAMMSGLAK--------------TDRVV-----------------EALE 207
           +EM   N V +  M++GL +              TDR                   +AL 
Sbjct: 199 DEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALN 258

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
            FR M  + ++ID  +  S+L  C                   S    G+Q+H   I+  
Sbjct: 259 FFRRMRFQGIAIDQYTFGSILTACG----------------ALSALEQGKQIHAYIIRTH 302

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           ++ ++ + ++L+DMY+K   +  AE  F  +  ++++SW  +I GYGQ   S +A+ +  
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFS 362

Query: 328 RMKSCGFEPDEVTSINMLVACV-----------------------------------RSG 352
            M+  G +PD+ T  +++ +C                                    + G
Sbjct: 363 EMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            I+    +FD M      SW A+++ Y+Q    KE I LF +M  + VKPD  T   +LS
Sbjct: 423 SIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLS 482

Query: 413 SCAAMGILESGKQVHAASLKTASHI---DNYVASGLIGIYSKCQRNELAERVFHRIP-EL 468
           +C+  G +E G     +  K    +   D+Y    +I +YS+  R + AE    ++P   
Sbjct: 483 ACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTC--MIDLYSRSGRLKEAEEFIKQMPMHP 540

Query: 469 DIVCWNSMIAGLSLNSLDIE 488
           D + W ++++   L   D+E
Sbjct: 541 DAIGWGTLLSACRLRG-DME 559



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 159/379 (41%), Gaps = 41/379 (10%)

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M  P  S + A+LS+ +++E H         ++     P    L  +L++    G     
Sbjct: 1   MSRPLSSQYAALLSAAARTEPHAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARA 60

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           ++V  A+     H + +  + L+   +  +  +  + +F  + + D V +N++IAG S  
Sbjct: 61  RRVFDAT----PHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGG 116

Query: 484 SLDIEAFMFFKQMRQ--NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
                A   +  + +  + + P++ + + ++ + + L     GRQ H QI + G+  + F
Sbjct: 117 GAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAF 176

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTV----------------------------- 572
           VGS L+ MY K G I  A++ FD M GKN V                             
Sbjct: 177 VGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRD 236

Query: 573 --TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
             TW  M+ G+ QNG   +A+  ++ M   G+  D  TF +ILTAC     ++ G +I  
Sbjct: 237 CITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHA 296

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
            +   H  + +    + ++D   +      AE     M CK + + W  L+     +   
Sbjct: 297 YIIRTHYDDNVFVG-SALVDMYSKCRSIKPAETAFRRMSCK-NIISWTALIVGYGQNGCS 354

Query: 691 RLAKRAAEELFR--LDPKN 707
             A R   E+ R  +DP +
Sbjct: 355 EEAVRVFSEMQRDGIDPDD 373


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 220/768 (28%), Positives = 367/768 (47%), Gaps = 136/768 (17%)

Query: 48  KMPHKDIYSWNA------ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRN-GL 100
           K+P K    WN       ++S+     D   A  +F     RN + WN+ +     + G 
Sbjct: 58  KLPQK----WNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGS 113

Query: 101 EEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANA 160
               L V+ ++  +G V      +   K  T ++D+  G   HG +IK G D ++Y+  A
Sbjct: 114 LHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCA 173

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           L++ Y +C   + A  VF EM  P  + +   +    +++++ + +E+FR M    +  +
Sbjct: 174 LMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAE 233

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
           + ++  VL  C + G               + N   +Q+H    + G ++D+ L N L+ 
Sbjct: 234 TATIVRVLQACGKMG---------------ALNA-AKQIHGYVFRFGLDSDVSLCNPLIS 277

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ------------KYQST-------- 320
           MY+KNG ++ A  +F ++  R+  SWN MI+ Y              + +S+        
Sbjct: 278 MYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVT 337

Query: 321 ---------------KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
                          + + +LQRM+  GF+P+  +  ++L A    G +  G+E      
Sbjct: 338 WNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVL 397

Query: 360 -----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +FD+M + ++ +WN+++S YS     ++A++
Sbjct: 398 RNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALR 457

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           L  +M+  G+KPD  T   ++S  A  G                                
Sbjct: 458 LLNQMEKEGIKPDLVTWNGMISGYAMWG-------------------------------- 485

Query: 451 KCQRNELAERVFHRIPEL----DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            C +  LA  V H+   L    ++V W ++I+G S    + ++  FF QM+Q  + P   
Sbjct: 486 -CGKEALA--VLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSA 542

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           S   +L +CA LS   +G+++H    ++G++ D+FV +ALI+MY K   +  A + F  +
Sbjct: 543 SITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRI 602

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             K   +WN MI G+A  G G EA+ ++ +M   GV PD ITF A+L+AC +SGL+  G 
Sbjct: 603 QNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGW 662

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           + F+SM  D+ + P L+HY CM+D LGRAG+  EA  LI  MP K D  IW  LL SCR+
Sbjct: 663 KYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRI 722

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           H N++ A+ AA+ LF+L+P NSA Y L+ N+YS   RW+D+  +RELM
Sbjct: 723 HKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELM 770



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 161/633 (25%), Positives = 286/633 (45%), Gaps = 87/633 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +++ G   D +L   L+  Y +C     A  +F +MP+ +   WN  +    +
Sbjct: 152 GMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQ 211

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S+ L                               +K + ++ KM          T+  V
Sbjct: 212 SEKL-------------------------------QKGVELFRKMQFSFLKAETATIVRV 240

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A   +  +   ++ HG V + GLD ++ + N L+S+Y+K G  + A  VF+ M   N 
Sbjct: 241 LQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNT 300

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS-------------SVLGVCAR 233
            ++ +M+S  A    + +A  +F  +    +  D V+ +              VL +  R
Sbjct: 301 SSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQR 360

Query: 234 -EGCGVESDVFA-----QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
            +G G + +  +     Q+ ++      G++ H   ++ GF+ D+++  SL+DMY KN  
Sbjct: 361 MQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHS 420

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           + SA+ +F N+  R++ +WN +++GY  K     A+ LL +M+  G +PD VT   M+  
Sbjct: 421 LTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG 480

Query: 348 CVRSGDIKTGREMFDSMPS----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
               G  K    +     S    P+V SW A++S  SQ+ N+++++K F +MQ  GV P+
Sbjct: 481 YAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPN 540

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             ++  +L +CA++ +L+ GK++H  S++     D +VA+ LI +YSK    + A +VF 
Sbjct: 541 SASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFR 600

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
           RI    +  WN MI G ++  L  EA   F +M++  + P   +F  +LS+C       +
Sbjct: 601 RIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGE 660

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           G +       D  + D  +   L E YC   D+ G                        +
Sbjct: 661 GWKYF-----DSMITDYRIVPRL-EHYCCMVDLLG------------------------R 690

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
            GY DEA  L   M    +KPD   + A+L +C
Sbjct: 691 AGYLDEAWDLIHTM---PLKPDATIWGALLGSC 720



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 218/472 (46%), Gaps = 66/472 (13%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           A K +H ++ R GL  D  LCN LI +YSK      A+ +FD M +++  SWN+++S+  
Sbjct: 252 AAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYA 311

Query: 66  KSDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
               L  A+ LF E+     + ++V+WN L+S    +G +E+ L++  +M  EGF P   
Sbjct: 312 ALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSS 371

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           ++ SV +A + L  +  G+  HG V++ G D ++YV  +L+ +Y K      A  VF+ M
Sbjct: 372 SMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNM 431

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES- 240
              N   + +++SG +      +AL +   M ++ +  D V+ + ++   A  GCG E+ 
Sbjct: 432 KNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEAL 491

Query: 241 DVFAQS-----------------------DNKFSRNVHGQ-----------QVHCL---- 262
            V  Q+                       +N+ S     Q            + CL    
Sbjct: 492 AVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRAC 551

Query: 263 ---------------TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                          +I+ GF  D+ ++ +L+DMY+K+  + +A  +F  +  +++ SWN
Sbjct: 552 ASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWN 611

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS- 366
            MI G+       +AI +   M+  G  PD +T   +L AC  SG I  G + FDSM + 
Sbjct: 612 CMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITD 671

Query: 367 ----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               P +  +  M+    ++    EA  L   M    +KPD T    +L SC
Sbjct: 672 YRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMP---LKPDATIWGALLGSC 720



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 168/352 (47%), Gaps = 10/352 (2%)

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           NV+ +    K    + I+L Q+     + PD     N++ + +  GD  +   +F     
Sbjct: 41  NVITSLTSVKMMHAQMIKLPQK-----WNPDAAAK-NLISSYLGFGDFWSAAMVFYVGLP 94

Query: 367 PSVSSWNAMLSSYSQSENHKE-AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
            +   WN+ +  +  S       +++F+E+  +GV  D    ++ L +C  +  +  G +
Sbjct: 95  RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 154

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +H   +K    +D Y+   L+  Y +C   E A +VFH +P  + + WN  I  L+L S 
Sbjct: 155 IHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAII-LNLQSE 213

Query: 486 DIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
            ++     F++M+ + +     +   VL +C K+ +    +Q+H  + + G  +D+ + +
Sbjct: 214 KLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCN 273

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
            LI MY K G +  AR+ FD M  +NT +WN MI  YA  G+ ++A  L+ ++ +S +KP
Sbjct: 274 PLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKP 333

Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           D +T+  +L+     G  +  + I   MQ   G +P     T ++  +   G
Sbjct: 334 DIVTWNCLLSGHFLHGYKEEVLNILQRMQ-GEGFKPNSSSMTSVLQAISELG 384



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 136/343 (39%), Gaps = 44/343 (12%)

Query: 420 LESGKQVHAASLKTASHID-NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
           L S K +HA  +K     + +  A  LI  Y        A  VF+     + + WNS + 
Sbjct: 46  LTSVKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVE 105

Query: 479 GL--SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
               S  SL I     FK++    +      ++  L +C ++   + G ++H  + K G+
Sbjct: 106 EFKSSAGSLHI-VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGF 164

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
             D+++  AL+  Y +C  +  A Q F  M     + WNE I    Q+    + V L++ 
Sbjct: 165 DLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRK 224

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFN---SMQLDHGV---EPILDHYT---- 646
           M  S +K +  T V +L AC   G ++   +I        LD  V    P++  Y+    
Sbjct: 225 MQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGK 284

Query: 647 --------------------CMIDCLGRAGHFHEAEMLIDEMPCKD---DPVIWEVLLSS 683
                                MI      G  ++A  L  E+   D   D V W  LLS 
Sbjct: 285 LELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSG 344

Query: 684 CRLHAN----VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
             LH      + + +R   E F+  P +S+  S+L  I S LG
Sbjct: 345 HFLHGYKEEVLNILQRMQGEGFK--PNSSSMTSVLQAI-SELG 384


>gi|195651407|gb|ACG45171.1| CRR4 [Zea mays]
          Length = 601

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 196/572 (34%), Positives = 301/572 (52%), Gaps = 55/572 (9%)

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F+ +  P      A +S L+K     E +E    + R+  +I S  +  VL  CA    
Sbjct: 34  LFDAVPRPTAALCCAFVSVLSKLSLHQELIEAVSSLHRRGGAIPSGCIPLVLKSCALSAA 93

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
             +                G Q HC  +  G   D+ +  +L+D YAKNG+MDSA + F 
Sbjct: 94  SCQ----------------GTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFE 137

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            +P +  +  N +I GY                                    RSGD++ 
Sbjct: 138 EMPIKDPIPMNCLIIGYS-----------------------------------RSGDVEE 162

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R +FDSMP  + +SWN+M++ Y+     +EA+ LF +M   G  P+  T+  + S CA 
Sbjct: 163 ARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNAITITTVFSICAK 222

Query: 417 MGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
            G LE+G++  A +  +   + N +  + L+ +Y KC+  + A R F R+P  D+V W++
Sbjct: 223 TGDLETGRR--AKAWVSEEDLQNVIVHTALMEMYVKCRAIDEARREFDRMPRRDVVAWST 280

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MIAG S N    E+   F++M+     P + +   VLS+CA+L S   G Q+ + IE   
Sbjct: 281 MIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGSYIESQT 340

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
                ++GSALI+MY KCG +  AR  F  M  K  + WN MI G A NG+ ++A+ LY 
Sbjct: 341 LPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYG 400

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD-HGVEPILDHYTCMIDCLGR 654
           +M+  GV+P++ITF+A+LTAC+H+GLVD G+  F  M+ +     P ++H  C++D L +
Sbjct: 401 EMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEHCACIVDLLCK 460

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           +G   EA   I +M  + + VIW  LLS+CR HA+V LAK AA +L  L+P +S+ Y LL
Sbjct: 461 SGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVLEPNSSSIYVLL 520

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +NIY+  G W D+R +R+LM    + K  AYS
Sbjct: 521 SNIYADAGLWGDVREIRDLMRSKNLQKLSAYS 552



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 203/428 (47%), Gaps = 26/428 (6%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A   G   H H L  G+  D F+   L++ Y+K  N  SA   F++MP KD    N ++ 
Sbjct: 93  ASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKDPIPMNCLII 152

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              +S D+E A +LFD MP +   SWN++I+     G  ++AL+++++M  EG  P  IT
Sbjct: 153 GYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNAIT 212

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + +VF       D+E GRR    V +  L +N+ V  AL+ +Y KC     A   F+ M 
Sbjct: 213 ITTVFSICAKTGDLETGRRAKAWVSEEDL-QNVIVHTALMEMYVKCRAIDEARREFDRMP 271

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + V ++ M++G +   R  E+LE+F  M       + V+L  VL  CA+ G    SD 
Sbjct: 272 RRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLG----SDE 327

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
             +    +  +    Q   LT  LG        ++L+DMY K G +  A  +F  + ++ 
Sbjct: 328 LGEQIGSYIES----QTLPLTSYLG--------SALIDMYTKCGHVARARDVFHRMEQKV 375

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           V++WN MI G      +  AI L   M   G +P+E+T + +L AC  +G +  G   F 
Sbjct: 376 VIAWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQ 435

Query: 363 SM------PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            M       SP V     ++    +S    EA K   +M+   V+P+      +LS+C A
Sbjct: 436 EMKKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFICDME---VEPNAVIWTTLLSACRA 492

Query: 417 MGILESGK 424
              +E  K
Sbjct: 493 HADVELAK 500



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 159/349 (45%), Gaps = 35/349 (10%)

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +  R +FD++P P+ +   A +S  S+   H+E I+    +  RG       + ++L SC
Sbjct: 29  RAARHLFDAVPRPTAALCCAFVSVLSKLSLHQELIEAVSSLHRRGGAIPSGCIPLVLKSC 88

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK----------------------- 451
           A       G Q H  +L      D +V + L+  Y+K                       
Sbjct: 89  ALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKDPIPMN 148

Query: 452 C-----QRN---ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           C      R+   E A R+F  +P      WNSMIA  +      EA   F QM +    P
Sbjct: 149 CLIIGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASP 208

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              +  TV S CAK      GR+  A + ++   N + V +AL+EMY KC  I  AR+ F
Sbjct: 209 NAITITTVFSICAKTGDLETGRRAKAWVSEEDLQN-VIVHTALMEMYVKCRAIDEARREF 267

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D M  ++ V W+ MI GY+ NG   E++ L++ M A+  KP+++T V +L+AC+  G  +
Sbjct: 268 DRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDE 327

Query: 624 VGVEIFNSMQLDHGVEPILDHY-TCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +G +I +   ++    P+  +  + +ID   + GH   A  +   M  K
Sbjct: 328 LGEQIGS--YIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQK 374



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 143/655 (21%), Positives = 253/655 (38%), Gaps = 172/655 (26%)

Query: 32  LYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
           L S  +   +A+HLFD +P        A +S   K         L  E+ E         
Sbjct: 21  LLSDASTYRAARHLFDAVPRPTAALCCAFVSVLSK-------LSLHQELIEA-------- 65

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           +S+L R G               G +P  +   ++  AS           CH LV   G+
Sbjct: 66  VSSLHRRG----------GAIPSGCIPLVLKSCALSAASCQGTQTH----CHALV--RGM 109

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV--------- 202
             +++V  AL+  YAK G    AV  FEEM   + +    ++ G +++  V         
Sbjct: 110 LGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKDPIPMNCLIIGYSRSGDVEEARRLFDS 169

Query: 203 ----------------------VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG---CG 237
                                  EAL +F  M+R+  S +++++++V  +CA+ G    G
Sbjct: 170 MPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNAITITTVFSICAKTGDLETG 229

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
             +  +   ++  +  VH                     +L++MY K   +D A   F  
Sbjct: 230 RRAKAWVSEEDLQNVIVH--------------------TALMEMYVKCRAIDEARREFDR 269

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
           +P R VV+W+ MIAGY    +  +++EL +RMK+   +P+EVT + +L AC         
Sbjct: 270 MPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELG 329

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      + G +   R++F  M    V +WN+M+   + +
Sbjct: 330 EQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALN 389

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
              ++AI L+ EM   GV+P+  T   +L++C   G+++ G        K   H      
Sbjct: 390 GFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHA----- 444

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
                          + +V H    +D++C +  +          EA+ F   M   E+ 
Sbjct: 445 ---------------SPQVEHCACIVDLLCKSGRL---------WEAYKFICDM---EVE 477

Query: 503 PTQFSFATVLSSC-----AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           P    + T+LS+C      +L+    G+ V   +E +   + I+V   L  +Y   G   
Sbjct: 478 PNAVIWTTLLSACRAHADVELAKLAAGKLV--VLEPNS--SSIYV--LLSNIYADAGLWG 531

Query: 558 GARQFFDMMHGKN-----TVTWNEM---IHGY-AQNGYGDEAVRLYKDMIASGVK 603
             R+  D+M  KN       +W E+   +H +  Q+ Y   +  +Y  +   G++
Sbjct: 532 DVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQ 586


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 226/776 (29%), Positives = 370/776 (47%), Gaps = 97/776 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA I+  GL  D ++   LI +Y KC    SA  +FDKM                 
Sbjct: 74  GRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR------------- 120

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                      D  P+  V  WN +I    + G  E+ L+ + +M             S 
Sbjct: 121 -----------DSAPDITV--WNPVIDGYFKYGHFEEGLAQFCRMQE----------LSW 157

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM-SEPN 185
           + A         GR+ HG +I+   + + Y+  AL+ +Y+ C     A  +F ++ +  N
Sbjct: 158 YMA---------GRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSN 208

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +  M+ G  +     ++LE++ L   +   + S S +     C+    G   D    
Sbjct: 209 IVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSH---GEVLDF--- 262

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+QVHC  IK+ F+ D ++  SLL MYAK+G ++ A+ +F  + ++ V  
Sbjct: 263 ----------GRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVEL 312

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------- 358
            N MI+ +    ++  A+ L  +MK+     D  T  ++L  C   G    GR       
Sbjct: 313 RNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVI 372

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +F +M    V +W +M++ + Q+   K+A+ 
Sbjct: 373 KRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALD 432

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LFR M+  GVK D   +  ++S+   +  +E G  +H  ++K     D +VA  L+ +YS
Sbjct: 433 LFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYS 492

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           K    E AE VF  +P  ++V WNSMI+  S N L   +     Q+ Q+  Y    S  T
Sbjct: 493 KFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITT 552

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           VL + + +++  +G+ +HA   +    +D+ V +ALI+MY KCG +  A+  F+ M  +N
Sbjct: 553 VLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRN 612

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            VTWN MI GY  +G  +EAVRL+K+M  S   PD++TF+A++T+CSHSG+V+ G+ +F 
Sbjct: 613 LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQ 672

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
            M++++GVEP ++HY  ++D LGRAG   +A   I  MP   D  +W  LL +CR H N+
Sbjct: 673 LMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNM 732

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            L +  A+ L +++P   + Y  L N+Y  +  WD    +R  M    + K P  S
Sbjct: 733 ELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCS 788



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 258/548 (47%), Gaps = 81/548 (14%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           ++AG+ +H +I+RN    D +L   LI +YS C+    A  LF K+ ++           
Sbjct: 158 YMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRS---------- 207

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                               N+V+WN +I   V NG+ EK+L +Y+   NE       + 
Sbjct: 208 --------------------NIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASF 247

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
              F A +    ++ GR+ H  VIK+    + YV  +LL++YAK G  + A  VF+++ +
Sbjct: 248 TGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD 307

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
                  AM+S      R  +AL ++  M      +DS ++SS+L  C+  G        
Sbjct: 308 KEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVG-------- 359

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                 F R VH +      IK   ++++ + ++LL MY K G  + A+ +F  + ER V
Sbjct: 360 ---SYDFGRTVHAE-----VIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDV 411

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE--VTSI------------------- 342
           V+W  MIAG+ Q  +   A++L + M+  G + D   +TS+                   
Sbjct: 412 VAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGF 471

Query: 343 --------NMLVAC------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                   ++ VAC       + G  ++   +F SMP+ ++ +WN+M+S YS +   + +
Sbjct: 472 AIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMS 531

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           I L  ++   G   D  ++  +L + +++  L  GK +HA  ++     D  V + LI +
Sbjct: 532 INLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDM 591

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y KC   + A+ +F  +P  ++V WNSMIAG   +    EA   FK+M+++E  P + +F
Sbjct: 592 YVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTF 651

Query: 509 ATVLSSCA 516
             +++SC+
Sbjct: 652 LALITSCS 659



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/520 (23%), Positives = 236/520 (45%), Gaps = 46/520 (8%)

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           +  + +  L +  +  +ALE+       A++    +  S+L  CA               
Sbjct: 22  SINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCA--------------- 66

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER-----S 302
              S   HG+ +H   + +G ++D +++ SL++MY K G + SA  +F  + E       
Sbjct: 67  -SLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPD 125

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCG----------------FEPD---EVTSIN 343
           +  WN +I GY +     + +    RM+                   FE D   E   I 
Sbjct: 126 ITVWNPVIDGYFKYGHFEEGLAQFCRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALIG 185

Query: 344 MLVACVRSGDIKTGREMFDSMPSPS-VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
           M  +C R  +  +   +F  + + S + +WN M+  + ++   +++++L+   +    K 
Sbjct: 186 MYSSCSRPMEAWS---LFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKL 242

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
              +     ++C+   +L+ G+QVH   +K     D YV + L+ +Y+K    E A++VF
Sbjct: 243 VSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVF 302

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
            ++ + ++   N+MI+    N    +A   + +M+  E     F+ +++LS C+ + S  
Sbjct: 303 DQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYD 362

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            GR VHA++ K    +++ + SAL+ MY KCG    A   F  M  ++ V W  MI G+ 
Sbjct: 363 FGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFC 422

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           QN    +A+ L++ M   GVK D     ++++A      V++G  + +   +  G+E  +
Sbjct: 423 QNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELG-HLIHGFAIKRGLESDV 481

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
                ++D   + G    AEM+   MP K + V W  ++S
Sbjct: 482 FVACSLVDMYSKFGFAESAEMVFSSMPNK-NLVAWNSMIS 520



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 5/129 (3%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + GK LHA+ +R  +  D  + N LI++Y KC     AQ +F+ MP +++ +WN++++
Sbjct: 562 ALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIA 621

Query: 63  AQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE-GFV 117
                 + E A +LF EM         V++  LI++   +G+ E+ L+++  M  E G  
Sbjct: 622 GYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVE 681

Query: 118 PTHITLASV 126
           P     ASV
Sbjct: 682 PRMEHYASV 690


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 209/649 (32%), Positives = 339/649 (52%), Gaps = 66/649 (10%)

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           H TL  V KA   L     G   HGL+   G + N+++ NAL+++Y++CG  + A  +F+
Sbjct: 10  HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 69

Query: 180 EMSE---PNEVTFTAMMSGLAKTDRVVEALEMFR---LMIRKAVSIDSVSLSSVLGVCAR 233
           E+++    + +++ +++S   K+     AL++F    L++ +  + +   + S++ +   
Sbjct: 70  EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL-- 127

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
             CG    V        ++ VHG       I+ G   D+ + N+L+D YAK G M++A  
Sbjct: 128 PACGSLKAV------PQTKEVHGN-----AIRNGTFLDVFVGNALIDAYAKCGLMENAVK 176

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +F+ +  + VVSWN M+AGY Q      A EL + M+      D VT             
Sbjct: 177 VFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVT------------- 223

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
                             W A+++ YSQ     EA+ +FR+M F G  P+  T+  +LS+
Sbjct: 224 ------------------WTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSA 265

Query: 414 CAAMGILESGKQVHAASLKTAS-HIDN---------YVASGLIGIYSKCQRNELAERVFH 463
           CA++G    G ++HA SLK     +DN          V + LI +YSKC+  + A  +F 
Sbjct: 266 CASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFD 325

Query: 464 RIP--ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE--MYPTQFSFATVLSSCAKLS 519
            IP  E ++V W  MI G +      +A   F +M      + P  ++ + +L +CA L+
Sbjct: 326 DIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA 385

Query: 520 SSFQGRQVHAQIEKDGYVND--IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           +   G+Q+HA + +    +    FV + LI MY KCGD+  AR  FD M  K+ ++W  M
Sbjct: 386 AIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSM 445

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           + GY  +G G EA+ ++  M  +G  PDDITF+ +L ACSH G+VD G+  F+SM  D+G
Sbjct: 446 MTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYG 505

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           + P  +HY   ID L R G   +A   + +MP +   V+W  LLS+CR+H+NV LA+ A 
Sbjct: 506 LTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHAL 565

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +L  ++ +N   Y+L++NIY++ GRW D+  +R LM ++ I K P  S
Sbjct: 566 NKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 614



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 247/488 (50%), Gaps = 47/488 (9%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA    K +H + +RNG F D F+ N LI+ Y+KC    +A  +F+ M  KD+ SWNA++
Sbjct: 134 KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 193

Query: 62  SAQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +   +S + + A++LF  M + N+    V+W  +I+   + G   +AL+V+ +M   G +
Sbjct: 194 AGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSL 253

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKI----------GLDKNIYVANALLSLYAK 167
           P  +T+ SV  A  +L     G   H   +K           G D+++ V NAL+ +Y+K
Sbjct: 254 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 313

Query: 168 CGWTKHAVPVFEE--MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK--AVSIDSVS 223
           C   K A  +F++  + E N VT+T M+ G A+     +AL++F  MI +   V+ ++ +
Sbjct: 314 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 373

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL-GFEADLH-LSNSLLDM 281
           +S +L  CA                  +    G+Q+H   ++   +++  + ++N L++M
Sbjct: 374 ISCILMACAH----------------LAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 417

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           Y+K GD+D+A  +F ++ ++S +SW  M+ GYG   + ++A+++  +M+  GF PD++T 
Sbjct: 418 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 477

Query: 342 INMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           + +L AC   G +  G   FDSM      +P    +   +   ++     +A K  ++M 
Sbjct: 478 LVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMP 537

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI-GIYSKCQRN 455
              ++P       +LS+C     +E  +  HA +     + +N  +  LI  IY+   R 
Sbjct: 538 ---MEPTAVVWVALLSACRVHSNVELAE--HALNKLVEMNAENDGSYTLISNIYATAGRW 592

Query: 456 ELAERVFH 463
           +   R+ H
Sbjct: 593 KDVARIRH 600



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 227/493 (46%), Gaps = 104/493 (21%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK---DIYSWNAILSA 63
           G   H  I  NG   + F+CN L+ +YS+C +   A  +FD++  +   D+ SWN+I+SA
Sbjct: 29  GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSA 88

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             KS +   A  LF +M                        L V+ K +NE      I++
Sbjct: 89  HVKSSNAWTALDLFSKM-----------------------TLIVHEKPTNER--SDIISI 123

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            ++  A  +L  V   +  HG  I+ G   +++V NAL+  YAKCG  ++AV VF  M  
Sbjct: 124 VNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEF 183

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DV 242
            + V++ AM++G +++     A E+F+ M ++ + +D V+ ++V+   ++ GC  E+ +V
Sbjct: 184 KDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNV 243

Query: 243 FAQ---------------------SDNKFSRNVHGQQVHCLTIK----------LGFEAD 271
           F Q                     S   FS+   G ++H  ++K           G + D
Sbjct: 244 FRQMIFSGSLPNCVTIISVLSACASLGAFSQ---GMEIHAYSLKNCLLTLDNDFGGEDED 300

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           L + N+L+DMY+K     +A  IF ++P  ER+VV+W VMI G+ Q   S  A++L   M
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360

Query: 330 KS--CGFEPDEVTSINMLVACV-------------------------------------R 350
            S   G  P+  T   +L+AC                                      +
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
            GD+ T R +FDSM   S  SW +M++ Y       EA+ +F +M+  G  PD  T  ++
Sbjct: 421 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 480

Query: 411 LSSCAAMGILESG 423
           L +C+  G+++ G
Sbjct: 481 LYACSHCGMVDQG 493



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 162/375 (43%), Gaps = 60/375 (16%)

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G + D  TL  +L +C  +     G   H          + ++ + L+ +YS+C   E A
Sbjct: 5   GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 64

Query: 459 ERVFHRIPEL---DIVCWNSMIAGLSLNSLDIEAFMFFKQM------RQNEMYPTQFSFA 509
             +F  I +    D++ WNS+++    +S    A   F +M      +         S  
Sbjct: 65  SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 124

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
            +L +C  L +  Q ++VH    ++G   D+FVG+ALI+ Y KCG +  A + F+MM  K
Sbjct: 125 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 184

Query: 570 NTVTWNEMIHGYAQNGY-----------------------------------GDEAVRLY 594
           + V+WN M+ GY+Q+G                                      EA+ ++
Sbjct: 185 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 244

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS------MQLDH---GVEPILDHY 645
           + MI SG  P+ +T +++L+AC+  G    G+EI         + LD+   G +  L  Y
Sbjct: 245 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 304

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI-WEVLLSSCRLHANVRLAKRAAEELFRLD 704
             +ID   +   F  A  + D++P ++  V+ W V++     + +   A +   E+    
Sbjct: 305 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI--- 361

Query: 705 PKNSAPYSLLANIYS 719
              S PY +  N Y+
Sbjct: 362 ---SEPYGVAPNAYT 373


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 212/770 (27%), Positives = 383/770 (49%), Gaps = 80/770 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HAH+++ GL  D F+   L+  Y                     + W A +        
Sbjct: 81  VHAHVIKCGLACDVFVGTSLLHFYGT-------------------FGWVAEVDM------ 115

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                 +F E+ E N+VSW +L+     NG  ++ +SVY ++  +G       +A+V ++
Sbjct: 116 ------VFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRS 169

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              L+D   G +  G VIK GLD  + VAN+L+S++  C   + A  VF++M E + +++
Sbjct: 170 CGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISW 229

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            ++++         ++LE F  M       D +++S++L VC            +  + +
Sbjct: 230 NSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCG-----------SAQNLR 278

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
           + R +HG     + +K G E+++ + NSLL MY++ G  + AE +F  + ER ++SWN M
Sbjct: 279 WGRGLHG-----MVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSM 333

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------------- 349
           +A +       +A+ELL  M       + VT    L AC                     
Sbjct: 334 MASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKIVHAFVILLGLHHN 393

Query: 350 ------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                       + G +   + +   MP     +WNA++  ++ ++    AI+ F  ++ 
Sbjct: 394 LIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLRE 453

Query: 398 RGVKPDRTTLAIILSS-CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
            GV  +  T+  +LS+  +   +L+ G  +HA  +     ++ +V S LI +Y++C    
Sbjct: 454 EGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLN 513

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            +  +F  +   +   WN++++  +      EA     +MR + ++  QFSF+   +   
Sbjct: 514 TSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIG 573

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
            L+   +G+Q+H+ I K G+ ++ +V +A ++MY KCG+I    +       ++  +WN 
Sbjct: 574 NLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNI 633

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDH 636
           +I   A++G+  +A   + +M+  G++PD +TFV++L+ACSH GLVD G+  F+SM    
Sbjct: 634 LISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKF 693

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA 696
           GV   ++H  C+ID LGRAG   EAE  I++MP     ++W  LL++C++H N+ LA++A
Sbjct: 694 GVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKA 753

Query: 697 AEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A+ LF LD  + + Y L +N+ +S  RW D+  VR+ M  + I K PA S
Sbjct: 754 ADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACS 803



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 186/723 (25%), Positives = 313/723 (43%), Gaps = 91/723 (12%)

Query: 32  LYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
           +YSK  +   AQH+FDKMP ++  SW                               NNL
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASW-------------------------------NNL 29

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA-STALLDVEHGRRCHGLVIKIG 150
           +S  VR G  +KA+  +  M   G  P+    AS+  A   +    E   + H  VIK G
Sbjct: 30  MSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTACDRSGCMTEGAFQVHAHVIKCG 89

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           L  +++V  +LL  Y   GW      VF+E+ EPN V++T++M G A    V E + ++R
Sbjct: 90  LACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYR 149

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            + R  V  +  ++++V+       CGV  D            + G QV    IK G + 
Sbjct: 150 RLRRDGVYCNENAMATVI-----RSCGVLVD-----------KMLGYQVLGSVIKSGLDT 193

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
            + ++NSL+ M+     ++ A  +F ++ ER  +SWN +I          K++E   +M+
Sbjct: 194 TVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMR 253

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREM------------------------------ 360
               + D +T   +L  C  + +++ GR +                              
Sbjct: 254 YTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSE 313

Query: 361 -----FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
                F  M    + SWN+M++S+  + N+  A++L  EM       +  T    LS+C 
Sbjct: 314 DAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACY 373

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
               LE+ K VHA  +    H +  + + L+ +Y K      A+RV   +P+ D V WN+
Sbjct: 374 N---LETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNA 430

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF-QGRQVHAQIEKD 534
           +I G + N     A   F  +R+  +     +   +LS+          G  +HA I   
Sbjct: 431 LIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVA 490

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G+  + FV S+LI MY +CGD+  +   FD++  KN+ TWN ++   A  G G+EA++L 
Sbjct: 491 GFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLI 550

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
             M   G+  D  +F        +  L+D G ++ +S+ + HG E         +D  G+
Sbjct: 551 IKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQL-HSLIIKHGFESNDYVLNATMDMYGK 609

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD--PKNSAPYS 712
            G   +   ++ + P       W +L+S+   H   + A+ A  E+  L   P +    S
Sbjct: 610 CGEIDDVFRILPQ-PRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVS 668

Query: 713 LLA 715
           LL+
Sbjct: 669 LLS 671



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 118/516 (22%), Positives = 235/516 (45%), Gaps = 90/516 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  ++++GL  +  +CN L+ +YS+   +  A+ +F KM  +D+ SWN+++++   
Sbjct: 280 GRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASH-- 337

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                        V NG   +AL +  +M        ++T  + 
Sbjct: 338 -----------------------------VDNGNYPRALELLIEMLQTRKATNYVTFTT- 367

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A +A  ++E  +  H  VI +GL  N+ + NAL+++Y K G    A  V + M + +E
Sbjct: 368 --ALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDE 425

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+ A++ G A       A+E F L+  + V ++ +++ ++L              F   
Sbjct: 426 VTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLL------------SAFLSP 473

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D+      HG  +H   +  GFE +  + +SL+ MYA+ GD++++  IF  L  ++  +W
Sbjct: 474 DDLLD---HGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTW 530

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT-----SINMLVACVRSGD------IK 355
           N +++         +A++L+ +M++ G   D+ +     +I   +  +  G       IK
Sbjct: 531 NAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIK 590

Query: 356 TGRE---------------------MFDSMPSP---SVSSWNAMLSSYSQSENHKEAIKL 391
            G E                     +F  +P P   S  SWN ++S+ ++    ++A + 
Sbjct: 591 HGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREA 650

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS--GLIGIY 449
           F EM   G++PD  T   +LS+C+  G+++ G   + +S+ T   +   +     +I + 
Sbjct: 651 FHEMLDLGLRPDHVTFVSLLSACSHGGLVDEG-LAYFSSMSTKFGVPTGIEHCVCIIDLL 709

Query: 450 SKCQRNELAERVFHR--IPELDIVCWNSMIAGLSLN 483
            +  +   AE   ++  +P  D+V W S++A   ++
Sbjct: 710 GRAGKLTEAENFINKMPVPPTDLV-WRSLLAACKIH 744



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 181/385 (47%), Gaps = 7/385 (1%)

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           G I+  + +FD MP  + +SWN ++S + +   +++A++ F  M   GV+P     A ++
Sbjct: 6   GSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLV 65

Query: 412 SSCAAMGILESGK-QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           ++C   G +  G  QVHA  +K     D +V + L+  Y         + VF  I E +I
Sbjct: 66  TACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNI 125

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           V W S++ G + N    E    ++++R++ +Y  + + ATV+ SC  L     G QV   
Sbjct: 126 VSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGS 185

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + K G    + V ++LI M+  C  I  A   FD M  ++T++WN +I     NG+ +++
Sbjct: 186 VIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKS 245

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           +  +  M  +  K D IT  A+L  C  +  +  G  + + M +  G+E  +     ++ 
Sbjct: 246 LEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGL-HGMVVKSGLESNVCVCNSLLS 304

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR-LDPKNSA 709
              +AG   +AE +  +M  + D + W  +++S   H +     RA E L   L  + + 
Sbjct: 305 MYSQAGKSEDAEFVFHKMR-ERDLISWNSMMAS---HVDNGNYPRALELLIEMLQTRKAT 360

Query: 710 PYSLLANIYSSLGRWDDLRAVRELM 734
            Y       S+    + L+ V   +
Sbjct: 361 NYVTFTTALSACYNLETLKIVHAFV 385



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/361 (22%), Positives = 153/361 (42%), Gaps = 51/361 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HAHI+  G   +TF+ + LI +Y++C + +++ ++FD + +K+  +WNAILSA   
Sbjct: 480 GMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSAN-- 537

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                           G  E+AL +  KM N+G      + +  
Sbjct: 538 -----------------------------AHYGPGEEALKLIIKMRNDGIHLDQFSFSVA 568

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 L  ++ G++ H L+IK G + N YV NA + +Y KCG       +  +    ++
Sbjct: 569 HAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQ 628

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++  ++S LA+     +A E F  M+   +  D V+  S+L  C+  G   E   +  S
Sbjct: 629 RSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSS 688

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVS 305
                          ++ K G    +     ++D+  + G +  AE   + +P   + + 
Sbjct: 689 ---------------MSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLV 733

Query: 306 WNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           W  ++A    +G    + KA + L  + S   +   V   N+  +  R  D++  R+  +
Sbjct: 734 WRSLLAACKIHGNLELARKAADRLFELDSSD-DSAYVLYSNVCASTRRWRDVENVRKQME 792

Query: 363 S 363
           S
Sbjct: 793 S 793


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 196/658 (29%), Positives = 351/658 (53%), Gaps = 60/658 (9%)

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           VF++ T   ++   ++ H L++ +G  +++ +   L++LYA  G    +   F+ +   N
Sbjct: 57  VFRSCT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113

Query: 186 EVTFTAMMSGLAKTDRVVEALE-MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
             ++ +M+S   +  R  ++++ +  L+    V  D  +   VL  C            +
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC-----------LS 162

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            +D        G+++HC  +K+GFE D++++ SL+ +Y++ G ++ A  +F ++P R V 
Sbjct: 163 LAD--------GEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVG 214

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI---------- 354
           SWN MI+G+ Q     +A+ +L RMK+   + D VT  +ML  C +S D+          
Sbjct: 215 SWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYV 274

Query: 355 --------------------KTGR-----EMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               K GR      +FD M    + SWN+++++Y Q+++   A+
Sbjct: 275 IKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTAL 334

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS-HIDNYVASGLIGI 448
             F+EM F G++PD  T+  + S    +     G+ VH   ++     +D  + + L+ +
Sbjct: 335 GFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNM 394

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFS 507
           Y+K    + A  VF ++P  D++ WN++I G + N L  EA   +  M +   + P Q +
Sbjct: 395 YAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGT 454

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           + ++L + + + +  QG ++H ++ K+    D+FV + LI+MY KCG +  A   F  + 
Sbjct: 455 WVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIP 514

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            + +V WN +I     +G+G++A++L+KDM A GVK D ITFV++L+ACSHSGLVD    
Sbjct: 515 QETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQW 574

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F++MQ ++ ++P L HY CM+D  GRAG+  +A  L+  MP + D  IW  LL++CR+H
Sbjct: 575 CFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIH 634

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
            N  L   A++ L  +D +N   Y LL+NIY+++G+W+    VR L  +  + K P +
Sbjct: 635 GNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGW 692



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 260/527 (49%), Gaps = 61/527 (11%)

Query: 32  LYSKCNNTHSAQHLFDKM----PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVS 87
           ++  C N + A+ L   +      +D+     +++      DL  +   F  +  +N+ S
Sbjct: 57  VFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFS 116

Query: 88  WNNLISALVRNGLEEKALS-VYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           WN+++SA VR G    ++  V   +S  G  P   T   V KA  +L D   G + H  V
Sbjct: 117 WNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWV 173

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K+G + ++YVA +L+ LY++ G  + A  VF +M   +  ++ AM+SG  +   V EAL
Sbjct: 174 LKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEAL 233

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            +   M  + V +D+V++SS+L +CA+      +DV           V G  VH   IK 
Sbjct: 234 RVLDRMKTEEVKMDTVTVSSMLPICAQ-----SNDV-----------VGGVLVHLYVIKH 277

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           G E+D+ +SN+L++MY+K G +  A+ +F  +  R +VSWN +IA Y Q      A+   
Sbjct: 278 GLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFF 337

Query: 327 QRMKSCGFEPDEVTSINM-------------------LVAC-----------------VR 350
           + M   G  PD +T +++                   +V C                  +
Sbjct: 338 KEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAK 397

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM-QFRGVKPDRTTLAI 409
            G I   R +F+ +PS  V SWN +++ Y+Q+    EAI  +  M + R + P++ T   
Sbjct: 398 LGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVS 457

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           IL + + +G L+ G ++H   +K    +D +VA+ LI +Y KC R E A  +F+ IP+  
Sbjct: 458 ILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQET 517

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            V WN++I+ L ++    +A   FK MR + +     +F ++LS+C+
Sbjct: 518 SVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACS 564



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 236/512 (46%), Gaps = 86/512 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +L+ G   D ++   LI LYS+                               
Sbjct: 166 GEKMHCWVLKMGFEHDVYVAASLIHLYSRFGA---------------------------- 197

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A+K+F +MP R+V SWN +IS   +NG   +AL V ++M  E      +T++S+
Sbjct: 198 ---VEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSM 254

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                   DV  G   H  VIK GL+ +++V+NAL+++Y+K G  + A  VF+ M   + 
Sbjct: 255 LPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDL 314

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ- 245
           V++ ++++   + D  V AL  F+ M+   +  D +++ S+            + +F Q 
Sbjct: 315 VSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSL------------ASIFGQL 362

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           SD +  R VHG  V C  +    E D+ + N+L++MYAK G +D A  +F  LP R V+S
Sbjct: 363 SDRRIGRAVHGFVVRCRWL----EVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVIS 418

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSC-GFEPDEVTSINMLVACVRSGDIKTGRE----- 359
           WN +I GY Q   +++AI+    M+      P++ T +++L A    G ++ G +     
Sbjct: 419 WNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRL 478

Query: 360 ------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                         +F  +P  +   WNA++SS     + ++A+
Sbjct: 479 IKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKAL 538

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG-LIGI 448
           +LF++M+  GVK D  T   +LS+C+  G+++  +       K      N    G ++ +
Sbjct: 539 QLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDL 598

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           + +    E A  +   +P + D   W +++A 
Sbjct: 599 FGRAGYLEKAYNLVSNMPIQADASIWGTLLAA 630



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 204/426 (47%), Gaps = 57/426 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G L+H +++++GL  D F+ N LI +YSK      AQ +FD M  +D+ SWN+I++A 
Sbjct: 265 VGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAY 324

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            ++DD   A   F EM               +  G+    L+V             ++LA
Sbjct: 325 EQNDDPVTALGFFKEM---------------LFVGMRPDLLTV-------------VSLA 356

Query: 125 SVFKASTALLDVEHGRRCHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           S+F     L D   GR  HG V++   L+ +I + NAL+++YAK G    A  VFE++  
Sbjct: 357 SIFG---QLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPS 413

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDV 242
            + +++  +++G A+     EA++ + +M   + +  +  +  S+L   +  G   +   
Sbjct: 414 RDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQ--- 470

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G ++H   IK     D+ ++  L+DMY K G ++ A  +F  +P+ +
Sbjct: 471 -------------GMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQET 517

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
            V WN +I+  G      KA++L + M++ G + D +T +++L AC  SG +   +  FD
Sbjct: 518 SVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFD 577

Query: 363 SMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           +M       P++  +  M+  + ++   ++A  L   M    ++ D +    +L++C   
Sbjct: 578 TMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMP---IQADASIWGTLLAACRIH 634

Query: 418 GILESG 423
           G  E G
Sbjct: 635 GNAELG 640


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 198/634 (31%), Positives = 335/634 (52%), Gaps = 64/634 (10%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL- 211
           +N+ ++  L++LY   G    A   F+ +   +   +  M+SG  +     E +  F L 
Sbjct: 84  QNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLF 143

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV-HGQQVHCLTIKLGFEA 270
           M+   +  D  +  SVL  C                    RNV  G ++HCL +K GF  
Sbjct: 144 MLSSGLQPDYRTFPSVLKAC--------------------RNVTDGNKIHCLALKFGFMW 183

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           D++++ SL+ +Y + G + +A ++F  +P R + SWN MI+GY Q   + +A+ L   ++
Sbjct: 184 DVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR 243

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTG--------------------------------- 357
           +     D VT +++L AC  +GD   G                                 
Sbjct: 244 AM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLK 299

Query: 358 --REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
             +++FD M    + SWN+++ +Y  +E    AI LF+EM+   ++PD  TL  + S  +
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILS 359

Query: 416 AMGILESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
            +G + + + V   +L+    +++  + + ++ +Y+K    + A  VF+ +P  D++ WN
Sbjct: 360 QLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWN 419

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQ--NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           ++I+G + N    EA   +  M +   E+   Q ++ +VL +C++  +  QG ++H ++ 
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLL 479

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVR 592
           K+G   D+FVG++L +MY KCG +  A   F  +   N+V WN +I  +  +G+G++AV 
Sbjct: 480 KNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVM 539

Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
           L+K+M+  GVKPD ITFV +L+ACSHSGLVD G   F  MQ D+G+ P L HY CM+D  
Sbjct: 540 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLY 599

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYS 712
           GRAG    A   I  MP + D  IW  LLS+CR+H NV L K A+E LF ++P++   + 
Sbjct: 600 GRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 659

Query: 713 LLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LL+N+Y+S G+W+ +  +R + S   + K P +S
Sbjct: 660 LLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWS 693



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 174/643 (27%), Positives = 299/643 (46%), Gaps = 111/643 (17%)

Query: 32  LYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ-----CKSDDLEFAYKLFDEMPERNVV 86
           L+  C N  SA+ L  ++   +    N  +SA+     C   ++  A   FD +  R+V 
Sbjct: 60  LFRYCTNLQSAKCLHARLVVSNAIQ-NVCISAKLVNLYCYLGNVALARYTFDHIHNRDVY 118

Query: 87  SWNNLISALVRNGLEEKALSVYNK-MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGL 145
           +WN +IS   R G   + +  ++  M + G  P + T  SV KA   + D   G + H L
Sbjct: 119 AWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCL 175

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
            +K G   ++YVA +L+ LY + G   +A  +F+EM   +  ++ AM+SG  ++    EA
Sbjct: 176 ALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEA 235

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           L +   +     ++DSV++ S+L  C   G              F+R V    +H  +IK
Sbjct: 236 LTLSDGL----RAMDSVTVVSLLSACTEAG-------------DFNRGV---TIHSYSIK 275

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
            G E++L +SN L+D+YA+ G +   + +F  +  R ++SWN +I  Y    Q  +AI L
Sbjct: 276 HGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILL 335

Query: 326 LQRMKSCGFEPDEVTSINM---------LVAC-------VRSG----DIKTG-------- 357
            Q M+    +PD +T I++         + AC       +R G    DI  G        
Sbjct: 336 FQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395

Query: 358 --------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG--VKPDRTTL 407
                   R +F+ +P+  V SWN ++S Y+Q+    EAI+++  M+  G  +  ++ T 
Sbjct: 396 KLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTW 455

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
             +L +C+  G L  G ++H   LK   ++D +V + L  +Y KC R + A  +F++IP 
Sbjct: 456 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPR 515

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
           ++ V WN++IA    +    +A M FK+M    + P   +F T+LS+C+           
Sbjct: 516 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS----------- 564

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT-----WNEMIHGYA 582
           H+ +  +G              +C           F+MM     +T     +  M+  Y 
Sbjct: 565 HSGLVDEG-------------EWC-----------FEMMQTDYGITPSLKHYGCMVDLYG 600

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           + G  + A+   K M    ++PD   + A+L+AC   G VD+G
Sbjct: 601 RAGQLEIALNFIKSM---PLQPDASIWGALLSACRVHGNVDLG 640



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 235/514 (45%), Gaps = 95/514 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H   L+ G   D ++   LI LY +     +A+ LFD+MP +D+ SWNA++S  C+
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQ 228

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S + + A  L D +   + V                                   T+ S+
Sbjct: 229 SGNAKEALTLSDGLRAMDSV-----------------------------------TVVSL 253

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A T   D   G   H   IK GL+  ++V+N L+ LYA+ G  K    VF+ M   + 
Sbjct: 254 LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDL 313

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ +++      ++ + A+ +F+ M    +  D ++L S+  + ++ G           
Sbjct: 314 ISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLG----------- 362

Query: 247 DNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           + +  R+V G      T++ G F  D+ + N+++ MYAK G +DSA  +F+ LP + V+S
Sbjct: 363 EIRACRSVQG-----FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVIS 417

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFE--PDEVTSINMLVACVRSGDIKTGRE---- 359
           WN +I+GY Q   +++AIE+   M+  G E   ++ T +++L AC ++G ++ G +    
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGR 477

Query: 360 -------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                          +F  +P  +   WN +++ +    + ++A
Sbjct: 478 LLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 537

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAASLKTASHIDNYVASGL 445
           + LF+EM   GVKPD  T   +LS+C+  G+++ G+   ++          + +Y    +
Sbjct: 538 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHY--GCM 595

Query: 446 IGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
           + +Y +  + E+A      +P + D   W ++++
Sbjct: 596 VDLYGRAGQLEIALNFIKSMPLQPDASIWGALLS 629



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 158/320 (49%), Gaps = 22/320 (6%)

Query: 420 LESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
           L+S K +HA  L  ++ I N  +++ L+ +Y       LA   F  I   D+  WN MI+
Sbjct: 67  LQSAKCLHA-RLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMIS 125

Query: 479 GL---SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           G      +S  I  F  F  M  + + P   +F +VL +C  ++    G ++H    K G
Sbjct: 126 GYGRAGYSSEVIRCFSLF--MLSSGLQPDYRTFPSVLKACRNVT---DGNKIHCLALKFG 180

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
           ++ D++V ++LI +YC+ G +  AR  FD M  ++  +WN MI GY Q+G   EA+ L  
Sbjct: 181 FMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSD 240

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
            + A     D +T V++L+AC+ +G  + GV I +S  + HG+E  L     +ID     
Sbjct: 241 GLRAM----DSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYAEF 295

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE--LFRLDPKNSAPYSL 713
           G   + + + D M  + D + W  ++ +  L+     A    +E  L R+ P      S 
Sbjct: 296 GSLKDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLIS- 353

Query: 714 LANIYSSLGRWDDLRAVREL 733
           LA+I S LG   ++RA R +
Sbjct: 354 LASILSQLG---EIRACRSV 370



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 13/198 (6%)

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           T+   C  L S+   + +HA++     + ++ + + L+ +YC  G++  AR  FD +H +
Sbjct: 59  TLFRYCTNLQSA---KCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNR 115

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYK-DMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           +   WN MI GY + GY  E +R +   M++SG++PD  TF ++L AC +   V  G +I
Sbjct: 116 DVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGNKI 172

Query: 629 FNSMQLDHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
            + + L  G   + D Y    +I    R G    A +L DEMP +D    W  ++S    
Sbjct: 173 -HCLALKFGF--MWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGS-WNAMISGYCQ 228

Query: 687 HANVRLAKRAAEELFRLD 704
             N + A   ++ L  +D
Sbjct: 229 SGNAKEALTLSDGLRAMD 246


>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
          Length = 826

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 236/779 (30%), Positives = 369/779 (47%), Gaps = 116/779 (14%)

Query: 6   AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            GK +HA IL+NG F   + ++  +L+  Y+KC                           
Sbjct: 86  TGKQIHARILKNGDFYAKNEYIETKLVIFYAKC--------------------------- 118

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
               D  E +  LF ++  RNV SW  +I    R GL E+AL  + +M      P +  +
Sbjct: 119 ----DAFEASEVLFSKLRVRNVYSWAAIIGVKCRIGLCEEALMGFVEMLQNEIFPDNFVV 174

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +V KA  AL     GR  HG V+K GL   ++VA++L  +Y KCG    A  VF+E+ E
Sbjct: 175 PNVCKACGALQWSRFGRGVHGYVVKSGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPE 234

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V + A+M G  +     EA+ +   M ++ +    V++S+ L   A    G+E    
Sbjct: 235 RNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMD-GIE---- 289

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q H + I  G E D  L  S L+ Y K G ++ AE+IF  + E+ V
Sbjct: 290 -----------EGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDRMIEKDV 338

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---- 359
           V+WN++I+GY Q+     AI + Q M+    + D VT   ++ A  R+ ++K G+E    
Sbjct: 339 VTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCY 398

Query: 360 -------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                          +FDS+ +  +  WN +LS Y++S    EA
Sbjct: 399 CIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEA 458

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
            +LF EMQ   V P+  T  +I+ S    G +   K+                      I
Sbjct: 459 FRLFYEMQLESVPPNAITWNLIILSFLRNGQVNEAKE----------------------I 496

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           +S+ Q + +        P L  V W +M+ GL  N    EA +F ++M+++ + P  FS 
Sbjct: 497 FSQMQSSGI-------FPNL--VSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSI 547

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              LS+C+ L+S   GR VH  I ++  + + + + ++L++MY KCGDI  A   F    
Sbjct: 548 TVALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKL 607

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
             +   +N MI  YA NG   EA+ L + +  +G+KPD+ITF ++L+AC+H+G V   VE
Sbjct: 608 CSDLPLYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITFTSLLSACNHAGDVSQAVE 667

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           IF  M   HG++P L+HY  M+D L  AG   +A  LI+EMP K D  + + L++SC + 
Sbjct: 668 IFTDMVSKHGIKPCLEHYGLMVDILASAGETDKALRLIEEMPYKSDARMIQSLVASCNMK 727

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
               L    +  L   +P+NS  Y  ++N Y+  G WD++   RE+M    + K P  S
Sbjct: 728 HKTELMDFLSRHLLETEPENSGNYVTISNAYAVEGSWDEVVKTREMMKAKRLKKSPGCS 786



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 167/324 (51%), Gaps = 14/324 (4%)

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           SPS +S+   +SS S+S   +EA+ L  EM FR ++        IL  C     L +GKQ
Sbjct: 30  SPSSASYFHRVSSLSKSGEIREALSLLTEMDFRKLRIGPEIYGEILQGCVYERDLCTGKQ 89

Query: 426 VHAASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           +HA  LK       + Y+ + L+  Y+KC   E +E +F ++   ++  W ++I      
Sbjct: 90  IHARILKNGDFYAKNEYIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIGVKCRI 149

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
            L  EA M F +M QNE++P  F    V  +C  L  S  GR VH  + K G  + +FV 
Sbjct: 150 GLCEEALMGFVEMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCVFVA 209

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           S+L +MY KCG +  AR+ FD +  +N V WN ++ GY QNG  +EA+RL  DM   G++
Sbjct: 210 SSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIE 269

Query: 604 PDDITFVAILTACSHSGLVDVG-----VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
           P  +T    L+A ++   ++ G     + I N ++LD+ +     ++ C      + G  
Sbjct: 270 PTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYC------KVGLI 323

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLS 682
             AEM+ D M  + D V W +L+S
Sbjct: 324 EYAEMIFDRM-IEKDVVTWNLLIS 346


>gi|356509350|ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Glycine max]
          Length = 678

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 232/777 (29%), Positives = 365/777 (46%), Gaps = 158/777 (20%)

Query: 7   GKLLHAHILRNGLFDDTF-LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ LH   L+ G+ + +  + NRL++LYS+C N   A HLF                   
Sbjct: 19  GRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLF------------------- 59

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                       DEMP+ N  SWN L+ A + +G    AL ++N M ++    TH +   
Sbjct: 60  ------------DEMPQTNSFSWNTLVQAHLNSGHTHSALHLFNAMPHK----THFSW-- 101

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                                            N ++S +AK G  + A  +F  M   N
Sbjct: 102 ---------------------------------NMVVSAFAKSGHLQLAHSLFNAMPSKN 128

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLM---IRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
            + + +++   ++     +AL +F+ M     + V  D+  L++ LG CA          
Sbjct: 129 HLVWNSIIHSYSRHGHPGKALFLFKSMNLDPSQIVYRDAFVLATALGACA---------- 178

Query: 243 FAQSDNKFSRNVHGQQVHCLTI--KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                +  + N  G+QVH       +G E D  L +SL+++Y K GD+DSA  I S + +
Sbjct: 179 -----DSLALNC-GKQVHARVFVDGMGLELDRVLCSSLINLYGKCGDLDSAARIVSFVRD 232

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
               S + +I+GY                                     +G ++  R +
Sbjct: 233 VDEFSLSALISGYAN-----------------------------------AGRMREARSV 257

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FDS   P    WN+++S Y  +    EA+ LF  M   GV+ D + +A ILS+ + + ++
Sbjct: 258 FDSKVDPCAVLWNSIISGYVSNGEEVEAVNLFSAMLRNGVQGDASAVANILSAASGLLVV 317

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ--------------------------- 453
           E  KQ+H  + K     D  VAS L+  YSKCQ                           
Sbjct: 318 ELVKQMHVYACKAGVTHDIVVASSLLDAYSKCQSPCEACKLFSELKEYDTILLNTMITVY 377

Query: 454 ----RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
               R E A+ +F+ +P   ++ WNS++ GL+ N+   EA   F QM + ++   +FSFA
Sbjct: 378 SNCGRIEDAKLIFNTMPSKTLISWNSILVGLTQNACPSEALNIFSQMNKLDLKMDRFSFA 437

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           +V+S+CA  SS   G QV  +    G  +D  + ++L++ YCKCG +   R+ FD M   
Sbjct: 438 SVISACACRSSLELGEQVFGKAITIGLESDQIISTSLVDFYCKCGFVEIGRKVFDGMVKT 497

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + V+WN M+ GYA NGYG EA+ L+ +M   GV P  ITF  +L+AC HSGLV+ G  +F
Sbjct: 498 DEVSWNTMLMGYATNGYGIEALTLFCEMTYGGVWPSAITFTGVLSACDHSGLVEEGRNLF 557

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           ++M+  + + P ++H++CM+D   RAG+F EA  LI+EMP + D  +W  +L  C  H N
Sbjct: 558 HTMKHSYNINPGIEHFSCMVDLFARAGYFEEAMDLIEEMPFQADANMWLSVLRGCIAHGN 617

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             + K AAE++ +L+P+N+  Y  L+NI +S G W+    VRELM +    K P  S
Sbjct: 618 KTIGKMAAEQIIQLEPENTGAYIQLSNILASSGDWEGSALVRELMRDKHFQKIPGCS 674



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 52/255 (20%)

Query: 420 LESGKQVHAASLKTASHIDN---YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
           L  G+Q+H A LKT   I N    VA+ L+ +YS+C+  + A  +F  +P+ +   WN++
Sbjct: 16  LREGRQLHVAFLKTG--ILNSSVAVANRLLQLYSRCRNLQDASHLFDEMPQTNSFSWNTL 73

Query: 477 IAGLSLNSLDI-EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           +    LNS     A   F  M     + T FS+  V+S+                     
Sbjct: 74  VQA-HLNSGHTHSALHLFNAMP----HKTHFSWNMVVSA--------------------- 107

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
                         + K G +  A   F+ M  KN + WN +IH Y+++G+  +A+ L+K
Sbjct: 108 --------------FAKSGHLQLAHSLFNAMPSKNHLVWNSIIHSYSRHGHPGKALFLFK 153

Query: 596 DM---IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC--MID 650
            M    +  V  D       L AC+ S  ++ G ++   + +D G+   LD   C  +I+
Sbjct: 154 SMNLDPSQIVYRDAFVLATALGACADSLALNCGKQVHARVFVD-GMGLELDRVLCSSLIN 212

Query: 651 CLGRAGHFHEAEMLI 665
             G+ G    A  ++
Sbjct: 213 LYGKCGDLDSAARIV 227


>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial; Flags: Precursor
 gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
 gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 695

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 220/720 (30%), Positives = 346/720 (48%), Gaps = 125/720 (17%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +L    +S  +  A  LFDEMP+RN  SWN +I   + +G +  +L  ++ M      
Sbjct: 66  NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMP----- 120

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
                                             +++ Y  N ++S +AK G    A  +
Sbjct: 121 ----------------------------------ERDGYSWNVVVSGFAKAGELSVARRL 146

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  M E + VT  +++ G        EAL +F+ +     S D+++L++VL  CA     
Sbjct: 147 FNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACA----- 198

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                      +      G+Q+H   +  G E D  +++SL+++YAK GD+  A  +   
Sbjct: 199 -----------ELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQ 247

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           + E    S + +I+GY                                      G +   
Sbjct: 248 IREPDDHSLSALISGYAN-----------------------------------CGRVNES 272

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R +FD   +  V  WN+M+S Y  +    EA+ LF EM+    + D  TLA ++++C  +
Sbjct: 273 RGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGL 331

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ------------------------ 453
           G LE+GKQ+H  + K     D  VAS L+ +YSKC                         
Sbjct: 332 GFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMI 391

Query: 454 -------RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
                  R + A+RVF RI    ++ WNSM  G S N   +E   +F QM + ++   + 
Sbjct: 392 KVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEV 451

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           S ++V+S+CA +SS   G QV A+    G  +D  V S+LI++YCKCG +   R+ FD M
Sbjct: 452 SLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM 511

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
              + V WN MI GYA NG G EA+ L+K M  +G++P  ITF+ +LTAC++ GLV+ G 
Sbjct: 512 VKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGR 571

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           ++F SM++DHG  P  +H++CM+D L RAG+  EA  L++EMP   D  +W  +L  C  
Sbjct: 572 KLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVA 631

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +    + K+AAE++  L+P+NS  Y  L+ I+++ G W+    VR+LM EN + K+P  S
Sbjct: 632 NGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/575 (25%), Positives = 263/575 (45%), Gaps = 127/575 (22%)

Query: 14  ILRNGLFDDT-----FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           I RN LFD+      F  N +IE Y       ++   FD MP +D YSWN ++S   K+ 
Sbjct: 80  IARN-LFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAG 138

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
           +L  A +LF+ MPE++VV+ N+L+   + NG  E+AL ++ +++   F    ITL +V K
Sbjct: 139 ELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLK 195

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           A   L  ++ G++ H  ++  G++ +  + ++L+++YAKCG  + A  + E++ EP++ +
Sbjct: 196 ACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHS 255

Query: 189 FTAMMSGLAKTDRV-------------------------------VEALEMFRLMIRKAV 217
            +A++SG A   RV                               +EAL +F  M R   
Sbjct: 256 LSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNET 314

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
             DS +L++V+  C   G       F ++         G+Q+HC   K G   D+ ++++
Sbjct: 315 REDSRTLAAVINACIGLG-------FLET---------GKQMHCHACKFGLIDDIVVAST 358

Query: 278 LLDMYAKNGD-------------------------------MDSAEVIFSNLPERSVVSW 306
           LLDMY+K G                                +D A+ +F  +  +S++SW
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 418

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
           N M  G+ Q   + + +E   +M       DEV+  +++ AC                  
Sbjct: 419 NSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI 478

Query: 350 ------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G ++ GR +FD+M       WN+M+S Y+ +    EAI L
Sbjct: 479 VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDL 538

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI--DNYVASGLIGIY 449
           F++M   G++P + T  ++L++C   G++E G+++   S+K       D    S ++ + 
Sbjct: 539 FKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLF-ESMKVDHGFVPDKEHFSCMVDLL 597

Query: 450 SKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
           ++    E A  +   +P ++D   W+S++ G   N
Sbjct: 598 ARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVAN 632



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 218/455 (47%), Gaps = 56/455 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA IL  G+  D+ + + L+ +Y+KC +   A ++ +++   D +S +A++S    
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +  +  LFD    R V+ WN++IS  + N ++ +AL ++N+M NE    +  TLA+V
Sbjct: 266 CGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSR-TLAAV 324

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP---------- 176
             A   L  +E G++ H    K GL  +I VA+ LL +Y+KCG    A            
Sbjct: 325 INACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDT 384

Query: 177 ---------------------VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
                                VFE +   + +++ +M +G ++    VE LE F  M + 
Sbjct: 385 ILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKL 444

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            +  D VSLSSV+  CA                  S    G+QV      +G ++D  +S
Sbjct: 445 DLPTDEVSLSSVISACA----------------SISSLELGEQVFARATIVGLDSDQVVS 488

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           +SL+D+Y K G ++    +F  + +   V WN MI+GY    Q  +AI+L ++M   G  
Sbjct: 489 SSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIR 548

Query: 336 PDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIK 390
           P ++T + +L AC   G ++ GR++F+SM       P    ++ M+   +++   +EAI 
Sbjct: 549 PTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAIN 608

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           L  EM F     D +  + IL  C A G    GK+
Sbjct: 609 LVEEMPF---DVDGSMWSSILRGCVANGYKAMGKK 640



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 143/294 (48%), Gaps = 15/294 (5%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +H H  + GL DD  + + L+++YSKC +   A  LF ++   D    N+++    
Sbjct: 336 TGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYF 395

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               ++ A ++F+ +  ++++SWN++ +   +NG   + L  +++M         ++L+S
Sbjct: 396 SCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSS 455

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A  ++  +E G +       +GLD +  V+++L+ LY KCG+ +H   VF+ M + +
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           EV + +M+SG A   +  EA+++F+ M    +    ++   VL  C   G   E     +
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFE 575

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           S               + +  GF  D    + ++D+ A+ G ++ A  +   +P
Sbjct: 576 S---------------MKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMP 614


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 203/661 (30%), Positives = 344/661 (52%), Gaps = 53/661 (8%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T   V KA   + D+  G   HGL+IK G D  ++VAN+L+S+YAKC     A  +F+ M
Sbjct: 12  TFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRM 71

Query: 182 SEPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           +E N+V ++ +++S  +   + +EAL +FR M +  V  ++ +L + L  C         
Sbjct: 72  NERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQAC--------- 122

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                 D+ F +   G ++H   +K     D++++N+L+ M+ + G M  A  IF  L E
Sbjct: 123 -----EDSSFKK--LGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDE 175

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           +  ++WN MIAG+ Q     +A++    ++    +PDEV+ I++L A  R G +  G+E+
Sbjct: 176 KDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEI 235

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              FD M +  + SW  ++++Y+Q+  H
Sbjct: 236 HAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCH 295

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            EA+KL R++Q +G+  D   +   L +C+ +  L   K+VH  +LK     D  + + +
Sbjct: 296 TEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMI 354

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +Y+ C     A R+F  I   D+V W SMI+    N L  EA   F  M++  + P  
Sbjct: 355 IDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDS 414

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +  ++LS+ A LS+  +G+++H  I + G++ +    ++L++MY  CG +  A + F  
Sbjct: 415 ITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFIC 474

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
              K+ V W  MI+ Y  +G G  AV L+  M    + PD ITF+A+L ACSHSGL++ G
Sbjct: 475 TRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEG 534

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
             +  +M+  + +EP  +HY C++D LGRA H  EA   +  M  +    +W   L +CR
Sbjct: 535 KRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACR 594

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
           +H+N +L + AA++L  LDP +   Y L++N++++ GRW D+  VR  M    + K+P  
Sbjct: 595 IHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGC 654

Query: 746 S 746
           S
Sbjct: 655 S 655



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 141/556 (25%), Positives = 252/556 (45%), Gaps = 82/556 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  I++ G     F+ N L+ +Y+KCN                             
Sbjct: 29  GAEIHGLIIKCGYDSIVFVANSLVSMYAKCN----------------------------- 59

Query: 67  SDDLEFAYKLFDEMPERN-VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
             D+  A KLFD M ERN VVSWN++ISA   NG   +AL ++ +M   G      TL +
Sbjct: 60  --DILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVA 117

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             +A       + G   H  ++K     ++YVANAL++++ + G   +A  +F+E+ E +
Sbjct: 118 ALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKD 177

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +T+ +M++G  +     EAL+ F  +    +  D VSL S+L    R G          
Sbjct: 178 NITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLG---------- 227

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                   ++G+++H   +K   +++L + N+L+DMY+K   +  A ++F  +  + ++S
Sbjct: 228 ------YLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLIS 281

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           W  +IA Y Q    T+A++LL+++++ G + D +   + L+AC                 
Sbjct: 282 WTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTL 341

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                               G+I     MF+S+    V SW +M+S Y  +    EA+ +
Sbjct: 342 KRGLSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGV 401

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F  M+   V+PD  TL  ILS+ A++  L  GK++H    +    ++    + L+ +Y+ 
Sbjct: 402 FYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYAC 461

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E A +VF       +V W +MI    ++     A   F  M   ++ P   +F  +
Sbjct: 462 CGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLAL 521

Query: 512 LSSCAKLSSSFQGRQV 527
           L +C+      +G+++
Sbjct: 522 LYACSHSGLINEGKRL 537



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 189/413 (45%), Gaps = 56/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA+ ++N L  +  + N LI++YSKC                            C 
Sbjct: 232 GKEIHAYAMKNWLDSNLRIGNTLIDMYSKCC---------------------------C- 263

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              + +A  +FD+M  ++++SW  +I+A  +N    +AL +  K+  +G     + + S 
Sbjct: 264 ---VAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGST 320

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + L  + H +  HG  +K GL  ++ + N ++ +YA CG   +A  +FE +   + 
Sbjct: 321 LLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDV 379

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T+M+S         EAL +F LM   +V  DS++L S+          + +     +
Sbjct: 380 VSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSI----------LSAAASLSA 429

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            NK      G+++H    + GF  +    NSL+DMYA  G +++A  +F     +S+V W
Sbjct: 430 LNK------GKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLW 483

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             MI  YG   +   A+EL   M+     PD +T + +L AC  SG I  G+ + ++M  
Sbjct: 484 TTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKC 543

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                P    +  ++    ++ + +EA    + MQ   ++P        L +C
Sbjct: 544 KYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQ---IEPTAEVWCAFLGAC 593



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 153/290 (52%), Gaps = 3/290 (1%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+  GV  D  T   +L +C  +  +  G ++H   +K       +VA+ L+ +Y+KC  
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 455 NELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
              A ++F R+ E  D+V WNS+I+  SLN   +EA   F++M++  +    ++    L 
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           +C   S    G ++HA I K   V D++V +AL+ M+ + G +  A + FD +  K+ +T
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN MI G+ QNG  +EA++ +  +  + +KPD+++ ++IL A    G +  G EI ++  
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEI-HAYA 239

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           + + ++  L     +ID   +      A ++ D+M  K D + W  ++++
Sbjct: 240 MKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINK-DLISWTTVIAA 288


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 203/687 (29%), Positives = 367/687 (53%), Gaps = 64/687 (9%)

Query: 102 EKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANAL 161
            KA+S  +  +    + + + L +  ++     ++E G+  H  +I  GL  +  + N+L
Sbjct: 25  RKAISRLDLTTTSPLIKSSLLLKACIRSG----NLELGKLLHHKLIDSGLPLDSVLLNSL 80

Query: 162 LSLYAKCGWTKHAVPVFEEMSEPNE--VTFTAMMSGLAKTDRVVEALEMFRLMI---RKA 216
           ++LY+KCG  ++A+ +F  M       V+++A++S  A       AL  F  M+   R  
Sbjct: 81  ITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNI 140

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLS 275
           +  +    +++L  C+       + +F  +         G  +    +K G F++ + + 
Sbjct: 141 IYPNEYCFTALLRSCS-------NPLFFTT---------GLAIFAFLLKTGYFDSHVCVG 184

Query: 276 NSLLDMYAKNG-DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
            +L+DM+ K G D+ SA ++F  +  +++V+W +MI  Y Q      A++L  R+    +
Sbjct: 185 CALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEY 244

Query: 335 EPDEVTSINMLVACV-----------------------------------RSGDIKTGRE 359
            PD+ T  ++L ACV                                   +S  ++  R+
Sbjct: 245 TPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRK 304

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F++M   +V SW A++S Y QS   +EAIKLF  M    V P+  T + +L +CA++  
Sbjct: 305 IFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPD 364

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
              GKQ+H  ++K      N V + LI +Y++    E A + F+ + E +++ +N+  A 
Sbjct: 365 FGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTA-AD 423

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
            +  +LD +   F  ++    +  + F++A +LS  A + +  +G Q+HA I K G+  +
Sbjct: 424 ANAKALDSDE-SFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTN 482

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           + + +ALI MY KCG+   A Q F+ M  +N +TW  +I G+A++G+  +A+ L+ +M+ 
Sbjct: 483 LCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLE 542

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
            GVKP+++T++A+L+ACSH GL+D   + FNSM  +H + P ++HY CM+D LGR+G   
Sbjct: 543 IGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLL 602

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           EA   I+ MP   D ++W   L SCR+H N +L + AA+++   +P + A Y LL+N+Y+
Sbjct: 603 EAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYA 662

Query: 720 SLGRWDDLRAVRELMSENCIVKDPAYS 746
           S GRWDD+ A+R+ M +  ++K+  YS
Sbjct: 663 SEGRWDDVAALRKSMKQKKLIKETGYS 689



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/552 (25%), Positives = 255/552 (46%), Gaps = 91/552 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH--KDIYSWNAILSAQ 64
           GKLLH  ++ +GL  D+ L N LI LYSKC +  +A  +F  M H  +D+ SW+AI    
Sbjct: 58  GKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAI---- 113

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM---SNEGFVPTHI 121
                                      IS    N +E +AL  +  M   S     P   
Sbjct: 114 ---------------------------ISCFANNSMESRALLTFLHMLQCSRNIIYPNEY 146

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGW-TKHAVPVFE 179
              ++ ++ +  L    G      ++K G  D ++ V  AL+ ++ K G   + A  VF+
Sbjct: 147 CFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFD 206

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           +M   N VT+T M++  ++   + +A+++F  ++    + D  +L+S+L  C      VE
Sbjct: 207 KMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSAC------VE 260

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
            + F+           G+Q+H   I+ G  +D+ +  +L+DMYAK+  ++++  IF+ + 
Sbjct: 261 LEFFSL----------GKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTML 310

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------- 348
             +V+SW  +I+GY Q  Q  +AI+L   M      P+  T  ++L AC           
Sbjct: 311 HHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQ 370

Query: 349 ------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                    RSG ++  R+ F+ +   ++ S+N    + +++ +
Sbjct: 371 LHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALD 430

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
             E+     E++  GV     T A +LS  A +G +  G+Q+HA  +K+    +  + + 
Sbjct: 431 SDESFN--HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNA 488

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI +YSKC   E A +VF+ +   +++ W S+I+G + +    +A   F +M +  + P 
Sbjct: 489 LISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPN 548

Query: 505 QFSFATVLSSCA 516
           + ++  VLS+C+
Sbjct: 549 EVTYIAVLSACS 560



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 193/413 (46%), Gaps = 57/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH+ ++R+GL  D F+   L+++Y+K                               
Sbjct: 267 GKQLHSWVIRSGLASDVFVGCTLVDMYAK------------------------------- 295

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S  +E + K+F+ M   NV+SW  LIS  V++  E++A+ ++  M +    P   T +SV
Sbjct: 296 SAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSV 355

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA  +L D   G++ HG  IK+GL     V N+L+++YA+ G  + A   F  + E N 
Sbjct: 356 LKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNL 415

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++       AK    +++ E F       V    V  S     C   G      +    
Sbjct: 416 ISYNTAADANAKA---LDSDESF----NHEVEHTGVGASPFTYACLLSGAACIGTI---- 464

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                  V G+Q+H L +K GF  +L ++N+L+ MY+K G+ ++A  +F+++  R+V++W
Sbjct: 465 -------VKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITW 517

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             +I+G+ +   +TKA+EL   M   G +P+EVT I +L AC   G I    + F+SM  
Sbjct: 518 TSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHY 577

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               SP +  +  M+    +S    EAI+    M F     D       L SC
Sbjct: 578 NHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDA---DALVWRTFLGSC 627



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 4/111 (3%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +HA I+++G   +  + N LI +YSKC N  +A  +F+ M ++++ +W +I+S  
Sbjct: 465 VKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGF 524

Query: 65  CKSDDLEFAYKLFDEMPE----RNVVSWNNLISALVRNGLEEKALSVYNKM 111
            K      A +LF EM E     N V++  ++SA    GL ++A   +N M
Sbjct: 525 AKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSM 575


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 236/711 (33%), Positives = 368/711 (51%), Gaps = 74/711 (10%)

Query: 88  WNNLISALVRNG--LEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDV---EHGRRC 142
           WN L++   R G   +  AL      ++EG  P   TL    + S   L V     GR+ 
Sbjct: 32  WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAAR-SCGFLRVGAAAAGRQV 90

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP--NEVTFTAMMSGLAKTD 200
           H L  K+GL  + +V N+L+S+Y +CG  + A  VF  + +   N V++ A+M+ L+   
Sbjct: 91  HALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALSGDP 150

Query: 201 RVVEALEMFR-LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
           R    LE+FR  ++     +D  +L +VL +CA  G       ++++         G+ V
Sbjct: 151 R--RGLELFRDCLVAVGGMVDEATLVTVLPMCAALG-------WSET---------GRAV 192

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H L  K G++A   + N+L+DMYAK G++  AE  F   P  SVVSWNVM+  Y +  ++
Sbjct: 193 HGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEAP--SVVSWNVMLGAYTRNREA 250

Query: 320 TKAIELLQRM--KSCGFEP-DEVTSINMLVACVRSGDIKTGREM---------------- 360
             A  LL+ M  K  G  P DE+T +++L AC    ++   RE+                
Sbjct: 251 GAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKV 310

Query: 361 --------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR-G 399
                               F  +   +VSSWN ++S+++Q +N   AI+LF +M    G
Sbjct: 311 PNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQ-QNTAAAIELFIQMTNACG 369

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE-LA 458
           +KPD  ++  +L +CA    L   K  H   L+     D  + + L+  Y +C R E LA
Sbjct: 370 LKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLA 429

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT-VLSSCAK 517
             +F  + E   V W +MI+G S N L  E+   F++M+  E + +    AT  L +C++
Sbjct: 430 RVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSE 489

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT-VTWNE 576
           LSS   G+++H    K    +D F+ S+LI+MY KCG +  AR FFD +  ++  V+W  
Sbjct: 490 LSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTA 549

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ-LD 635
           MI GYA NG G EAV LY  M   G++PD+ T++ +L AC H+G+++ G+  F+ M+   
Sbjct: 550 MITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHH 609

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           H +E  L+HY+C+I  L RAG F +A  L+ EMP + D  I   +LS+C +H    L   
Sbjct: 610 HKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSD 669

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AE L  L+P  +  Y L +N+Y+   RWDD+R VR+++ +  I K+P  S
Sbjct: 670 VAERLLELEPDKAEHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPGCS 720



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 182/682 (26%), Positives = 295/682 (43%), Gaps = 150/682 (21%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A  AG+ +HA   + GL  D F+ N L+ +Y +C     A+                   
Sbjct: 83  AAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAE------------------- 123

Query: 63  AQCKSDDLEFAYKLFDEMPE--RNVVSWNNLISAL---VRNGLE--EKALSVYNKMSNEG 115
                       K+F  +P+  RN+VSWN L++AL    R GLE     L     M +E 
Sbjct: 124 ------------KVFGGIPDAARNIVSWNALMAALSGDPRRGLELFRDCLVAVGGMVDEA 171

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
                 TL +V     AL   E GR  HGL  K G D    V NAL+ +YAKCG    A 
Sbjct: 172 ------TLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAE 225

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK---AVSIDSVSLSSVLGVCA 232
             F E   P+ V++  M+    +      A  + R M  K   +V  D +++ SVL  C+
Sbjct: 226 RAFPE--APSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACS 283

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE-ADLHLSNSLLDMYAKNGDMDSA 291
                           + SR    +++H  T++ G + A   + N+L+  Y + G +  A
Sbjct: 284 -------------GPTELSRL---RELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHA 327

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL-LQRMKSCGFEPDEVTSINMLVAC-- 348
           + +F+++  ++V SWN +I+ + Q+  +  AIEL +Q   +CG +PD  +  ++L+AC  
Sbjct: 328 DRVFTDIRRKTVSSWNTLISAHAQQ-NTAAAIELFIQMTNACGLKPDGFSIGSLLMACAD 386

Query: 349 --------------VRSGDIKT--------------------GREMFDSMPSPSVSSWNA 374
                         +R+G  +                      R +FD+M       W A
Sbjct: 387 PKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIA 446

Query: 375 MLSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           M+S YSQ+    E+++LFREMQ   G      +    L +C+ +  +  GK++H  +LK 
Sbjct: 447 MISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKA 506

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI-VCWNSMIAGLSLNSLDIEAFMF 492
               D +++S LI +YSKC   E A   F R+   D  V W +MI G ++N L  EA   
Sbjct: 507 DLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVEL 566

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           + +MR+  M P +F++  +L +C            HA + ++G                 
Sbjct: 567 YGKMRREGMEPDEFTYLGLLMACG-----------HAGMLEEGL---------------- 599

Query: 553 CGDIYGARQFFDMM---HGKNTVT---WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
                   +FFD M   H K  V    ++ +I   ++ G   +AV L  +M     +PD 
Sbjct: 600 --------RFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQ---EPDA 648

Query: 607 ITFVAILTACSHSGLVDVGVEI 628
               ++L+AC   G  ++G ++
Sbjct: 649 KILSSVLSACHIHGEAELGSDV 670


>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
 gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
          Length = 840

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 230/784 (29%), Positives = 379/784 (48%), Gaps = 115/784 (14%)

Query: 1   KKAHVAGKLLHAHILRNG--LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           ++A   G+ +H  IL+NG  +  + ++  +L+  YSKC                      
Sbjct: 91  ERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKC---------------------- 128

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
                    D+ E A +LF ++  +N  SW  ++    R G  ++AL  + +M   G + 
Sbjct: 129 ---------DESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLL 179

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
            +  +   FKAS AL  +  G+  H  V+K+GL   IYVA +LL +Y KCG  + A  VF
Sbjct: 180 DNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVF 239

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           +++ E N V + +M+    +     EA+E F  M  + V+   V+LSS L   A      
Sbjct: 240 DKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASA------ 293

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                       S    G+Q H L +  G E    L +SL++ Y+K G ++ AE++FS +
Sbjct: 294 ----------NLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEM 343

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
            E+  V+WN++++GY       +A++L   M+S     D VT  +++ A   S ++K G+
Sbjct: 344 LEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGK 403

Query: 359 E-----------------------------------MFDSMPSPSVSSWNAMLSSYSQSE 383
           E                                   +FD+     +  WN +L++Y++  
Sbjct: 404 EGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQG 463

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
           +  E +KLF +MQ  G+ P+     +I  +   +G+L  GK   A         D ++  
Sbjct: 464 HSGETLKLFYQMQLEGLPPN-----VISWNSVILGLLNKGKVDQAK--------DTFMEM 510

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
             +GI   C                +++ W ++I GL+ N L  EAF+ F+ M +  + P
Sbjct: 511 QSLGI---CP---------------NLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKP 552

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              S +++LS+C+ ++S   GR +H  I +        V  +L+ MY KCG I  A++ F
Sbjct: 553 NSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVF 612

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           DM+  K    +N MI GYA +G   EA+ L++ +    +KPD+ITF +IL+AC H+GLV 
Sbjct: 613 DMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACGHAGLVR 672

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G+E+F  M  +H +    +HY C++  L R+ +  EA  +I  MP + D  I+  LL++
Sbjct: 673 EGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPFEPDAFIFGSLLAA 732

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           CR H +  L +R  E L +L+P NS  Y  L+N Y++ G WD+   VR LM E  + K P
Sbjct: 733 CREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVRGLMKERSLSKIP 792

Query: 744 AYSL 747
            +SL
Sbjct: 793 GHSL 796



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 4/317 (1%)

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           S  S+   +SS  +  +  EA+ L  +++   +         +L  C     L  G+Q+H
Sbjct: 42  SYKSYLNHISSLCKQGHLLEALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIH 101

Query: 428 AASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
              LK    I  + Y+ + L+  YSKC  +E+A R+F ++   +   W +++   S    
Sbjct: 102 GRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGF 161

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
           + EA M F++M +  +    F       +   L     G+ VHA + K G    I+V ++
Sbjct: 162 NQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATS 221

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           L++MY KCG    A++ FD +  KN V WN MI  + QNG   EAV  + +M   GV P 
Sbjct: 222 LLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPT 281

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            +T  + L+A ++  ++D G +  +++ +  G+E      + +I+   + G   +AE++ 
Sbjct: 282 QVTLSSFLSASANLSVIDEGKQ-GHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVF 340

Query: 666 DEMPCKDDPVIWEVLLS 682
            EM  + D V W +L+S
Sbjct: 341 SEM-LEKDTVTWNLLVS 356


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 196/655 (29%), Positives = 337/655 (51%), Gaps = 63/655 (9%)

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGL------DKNIYVANALLSLYAKCGWTKHAVPV 177
           A++  A + L  +  G+R HGLV++  L      D+++ + N ++ +Y +CG T  A+ V
Sbjct: 14  AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESL-LENIVIQMYLRCGCTDLALDV 72

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL-GVCAREGC 236
           F+ M + N V +T+++S         +A+ +FR M+   VS D ++ +S+L     RE  
Sbjct: 73  FDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRE-- 130

Query: 237 GVESDVFAQSDNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                          RN+  G++VH   ++ G+E D  + N +++MY K GD++ A  +F
Sbjct: 131 ---------------RNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVF 175

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
            ++ + +V SW ++IA Y Q     + + LL RM   G +PD  T   +L AC   G ++
Sbjct: 176 DSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALE 235

Query: 356 TGR------------------------------------EMFDSMPSPSVSSWNAMLSSY 379
             +                                     +F  + +  + SW++M++++
Sbjct: 236 EAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAF 295

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           +QS   K AI+L   M   GV+P+  T   +L +  ++   + GK++HA  ++     D 
Sbjct: 296 AQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDV 355

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            + S L+ +Y      E A  +F    E D+V W+SMIAG S N     A   F++M  +
Sbjct: 356 CLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVD 415

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
            + P   +F + + +CA + +  +G Q+H ++   G   D+ V +AL+ +Y KCG +  A
Sbjct: 416 GVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEA 475

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
              F  M  KN +TW  +   Y QNG+G  +++L   M   G+KPD I FVAIL +C+++
Sbjct: 476 EAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYA 535

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           G +  G+  +N M  D G+ P ++H  CM+D LGRAG    AE LI+ M   +  + W +
Sbjct: 536 GQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKF-ESSLAWMM 594

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           LL++C+ H +   A RAAE++F+L+PKN+ PY LL++++ + G W+     R  M
Sbjct: 595 LLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRM 649



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 154/611 (25%), Positives = 271/611 (44%), Gaps = 90/611 (14%)

Query: 7   GKLLHAHILRNGLF-----DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           GK +H  ++R  L      D++ L N +I++Y +C  T  A  +FD+M  +++ +W +++
Sbjct: 29  GKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLI 88

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           SA        FA    D                         A+ ++ KM   G  P  I
Sbjct: 89  SA------FTFAGHFGD-------------------------AMVLFRKMLLSGVSPDRI 117

Query: 122 TLASV-FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           T  S+  K S    +++ G+R H  +++ G + +  V N ++ +Y KCG  + A  VF+ 
Sbjct: 118 TFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDS 177

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           + +PN  ++T +++  A+    +E L +   M +  V  D  + ++VLG C   G   E+
Sbjct: 178 IQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEA 237

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTI-KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
            +                 H  TI   G + D  +  +L+++Y K G ++ A  +F  + 
Sbjct: 238 KIL----------------HAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQID 281

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA------------ 347
            + +VSW+ MIA + Q  Q+  AI+LL  M   G  P+ VT +N+L A            
Sbjct: 282 NKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKE 341

Query: 348 --------------CVRS---------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                         C+ S         G ++T R +F+S     V SW++M++ YSQ+E+
Sbjct: 342 IHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNES 401

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
              A+ LFREM+  GV+P+  T    + +CA +G L  G Q+H          D  VA+ 
Sbjct: 402 PARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATA 461

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           L+ +Y KC R E AE VF  + + +++ W S+      N     +      M    M P 
Sbjct: 462 LVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPD 521

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              F  +L SC       +G   +  + +D G    +     ++++  + G +  A Q  
Sbjct: 522 GIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLI 581

Query: 564 DMMHGKNTVTW 574
           + M  ++++ W
Sbjct: 582 NTMKFESSLAW 592



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 203/417 (48%), Gaps = 61/417 (14%)

Query: 8   KLLHA-HILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           K+LHA  I   GL  D  +   LI LY KC                              
Sbjct: 238 KILHAATISSTGLDRDAAVGTALINLYGKCGA---------------------------- 269

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              LE A+ +F ++  +++VSW+++I+A  ++G  + A+ +   M  EG  P ++T  +V
Sbjct: 270 ---LEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNV 326

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A T+L   ++G+  H  +++ G   ++ + +AL+ +Y   GW + A  +FE   E + 
Sbjct: 327 LEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDV 386

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++++M++G ++ +    AL +FR M    V  +SV+  S +  CA  G G         
Sbjct: 387 VSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACA--GVGALR------ 438

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q+H     LG + D+ ++ +L+++Y K G ++ AE +F  + ++++++W
Sbjct: 439 --------RGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTW 490

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             +   YGQ    +++++LL  M+  G +PD +  + +LV+C  +G +  G   ++ M  
Sbjct: 491 TSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQ 550

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA--IILSSCAA 416
               +P+V     M+    ++   + A +L   M+F       ++LA  ++L++C A
Sbjct: 551 DFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKF------ESSLAWMMLLTACKA 601



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 164/326 (50%), Gaps = 18/326 (5%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA---------SHIDNYVASGL 445
           M+ R ++ + +  A IL++C+ +  L  GK+VH   ++ +         S ++N V    
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIV---- 56

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +Y +C   +LA  VF R+ + ++V W S+I+  +      +A + F++M  + + P +
Sbjct: 57  IQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDR 116

Query: 506 FSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            +F ++L   +    +  +G++VH+ I + GY  D  V + ++EMY KCGD+  A   FD
Sbjct: 117 ITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFD 176

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            +   N  +W  +I  YAQNG+  E +RL   M  +GVKPD  TF  +L AC+  G ++ 
Sbjct: 177 SIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEE 236

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
              +  +     G++      T +I+  G+ G   EA  +  ++  K D V W  ++++ 
Sbjct: 237 AKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNK-DIVSWSSMIAA- 294

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAP 710
              A    AK A + L  +D +   P
Sbjct: 295 --FAQSGQAKSAIQLLMLMDLEGVRP 318



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/428 (21%), Positives = 175/428 (40%), Gaps = 69/428 (16%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   GK +HA I++ G  DD  L + L+++Y       +A+ +F+    +D+ SW++++
Sbjct: 334 KAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMI 393

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +   +           +E P R                    ALS++ +M  +G  P  +
Sbjct: 394 AGYSQ-----------NESPAR--------------------ALSLFREMEVDGVQPNSV 422

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  S   A   +  +  G + H  V  +GLDK++ VA AL++LY KCG  + A  VF  M
Sbjct: 423 TFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGM 482

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + N +T+T++     +      +L++   M  + +  D +   ++L  C   G      
Sbjct: 483 KKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAG------ 536

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                  + S+ +H    + +T   G    +     ++D+  + G +++AE + + +   
Sbjct: 537 -------QMSKGLH--YYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFE 587

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML--VACVRSGDIKTGRE 359
           S ++W +++        + +A    +++     EP   T   +L  V C  +G  +   E
Sbjct: 588 SSLAWMMLLTACKAHNDTARAARAAEKIFQ--LEPKNATPYVLLSSVFCA-AGSWEAAEE 644

Query: 360 MFDSMPSPSVS------------------SWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
               M    V                   + + +L  +   E      KL REMQ  G  
Sbjct: 645 TRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYV 704

Query: 402 PDRTTLAI 409
           PD T + +
Sbjct: 705 PDATAVRL 712


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 187/601 (31%), Positives = 330/601 (54%), Gaps = 51/601 (8%)

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M + N V+F  ++ G  ++ ++ E +++F  + R+   ++    +++L +       VE 
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLV----SVEC 56

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
              A S            +H    KLG E++  +  +L+D YA  G ++SA   F  +  
Sbjct: 57  AELAYS------------LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIAC 104

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------- 349
           + +VSW  M+A Y +  +   +++L   M+  GF P+  T   +L AC+           
Sbjct: 105 KDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSV 164

Query: 350 ------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + GD      +F+ MP   V  W+ M+S Y+QS   
Sbjct: 165 HGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQS 224

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +EA++LF +M+   V P++ T A +L SCA++  L+ GKQVH   LK     + +V++ L
Sbjct: 225 REAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNAL 284

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC R + + ++F  +P  + V WN+MI G   +    +A   +K M + ++  ++
Sbjct: 285 MDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASE 344

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            ++++VL +CA L++   G Q+H+   K  Y  D+ VG+ALI+MY KCG I  AR  FDM
Sbjct: 345 VTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDM 404

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  ++ ++WN MI GY+ +G   EA++ ++ M  +   P+ +TFV+IL+ACS++GL+D+G
Sbjct: 405 LSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIG 464

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
              F SM  D+G+EP ++HYTCM+  LGR+GH  +A  LI+E+P + +  +W  LL +C 
Sbjct: 465 QNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACV 524

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
           +H +V L   +A+++ ++DP++ A + LL+NIY+   RW+ + +VR+ M    + K+P  
Sbjct: 525 IHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGL 584

Query: 746 S 746
           S
Sbjct: 585 S 585



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/582 (25%), Positives = 273/582 (46%), Gaps = 84/582 (14%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           MP+RN VS+  LI   V++   ++ + +++++  EG         ++ K   ++   E  
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
              H  + K+G + N +V  AL+  YA CG    A   F+ ++  + V++T M++  A+ 
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
           DR  ++L++F  M     + +  + + VL  C     G+E+         FS    G+ V
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACI----GLEA---------FSV---GKSV 164

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H   +K  +E DL++   LLD+Y K GD +    +F  +P+  V+ W+ MI+ Y Q  QS
Sbjct: 165 HGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQS 224

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-------------------- 359
            +A+EL  +M+     P++ T  ++L +C    +++ G++                    
Sbjct: 225 REAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNAL 284

Query: 360 ---------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
                          +F  +P+ +  +WN M+  Y QS +  +A+ L++ M    V+   
Sbjct: 285 MDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASE 344

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
            T + +L +CA++  +E G Q+H+ SLKT    D  V + LI +Y+KC   + A  VF  
Sbjct: 345 VTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDM 404

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           + E D + WN+MI+G S++ L  EA   F+ M++ E  P + +F ++LS+C+       G
Sbjct: 405 LSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIG 464

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           +     + +D                      YG     +         +  M+    ++
Sbjct: 465 QNYFKSMVQD----------------------YGIEPCME--------HYTCMVWLLGRS 494

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
           G+ D+AV+L +++    ++P+   + A+L AC     VD+G+
Sbjct: 495 GHLDKAVKLIEEI---PLEPNVKVWRALLGACVIHNDVDLGI 533



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 209/450 (46%), Gaps = 82/450 (18%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LHA I + G   + F+   LI+ Y+ C + +SA+  FD +  KD+               
Sbjct: 63  LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDM--------------- 107

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                           VSW  +++    N   + +L ++ +M   GF P H T A V KA
Sbjct: 108 ----------------VSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKA 151

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              L     G+  HG V+K   + ++YV   LL LY K G     + VFEEM + + + +
Sbjct: 152 CIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPW 211

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           + M+S  A++++  EA+E+F  M R  V  +  + +SVL  CA     +E+         
Sbjct: 212 SFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCA----SIENLQL------ 261

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+QVHC  +K+G + ++ +SN+L+D+YAK G +D++  +F  LP R+ V+WN M
Sbjct: 262 ------GKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTM 315

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------- 348
           I GY Q     KA+ L + M  C  +  EVT  ++L AC                     
Sbjct: 316 IVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIY 375

Query: 349 --------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + G IK  R +FD +      SWNAM+S YS      EA+K F+ 
Sbjct: 376 DKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQM 435

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           MQ     P++ T   ILS+C+  G+L+ G+
Sbjct: 436 MQETECVPNKLTFVSILSACSNAGLLDIGQ 465



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 214/412 (51%), Gaps = 35/412 (8%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y    +L    K  D     ++F+EMP+ +V+ W+ +IS   ++    +A+ ++ +M 
Sbjct: 176 DLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMR 235

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
               +P   T ASV ++  ++ +++ G++ H  V+K+GLD N++V+NAL+ +YAKCG   
Sbjct: 236 RAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLD 295

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +++ +F E+   NEVT+  M+ G  ++    +AL +++ M+   V    V+ SSVL  CA
Sbjct: 296 NSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACA 355

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                             +    G Q+H L++K  ++ D+ + N+L+DMYAK G + +A 
Sbjct: 356 ----------------SLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNAR 399

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
           ++F  L ER  +SWN MI+GY       +A++  Q M+     P+++T +++L AC  +G
Sbjct: 400 LVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAG 459

Query: 353 DIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
            +  G+  F SM       P +  +  M+    +S +  +A+KL  E+    ++P+    
Sbjct: 460 LLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIP---LEPNVKVW 516

Query: 408 AIILSSCAA-----MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
             +L +C       +GI+ + + +       A+H+       L  IY++ +R
Sbjct: 517 RALLGACVIHNDVDLGIMSAQQILQIDPQDEATHV------LLSNIYARTRR 562



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 145/307 (47%), Gaps = 47/307 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H H+L+ GL  + F+ N L+++Y+KC    ++  LF ++P+++  +WN        
Sbjct: 262 GKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWN-------- 313

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I   V++G  +KALS+Y  M       + +T +SV
Sbjct: 314 -----------------------TMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSV 350

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A  +L  +E G + H L +K   DK++ V NAL+ +YAKCG  K+A  VF+ +SE +E
Sbjct: 351 LRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDE 410

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ AM+SG +    V EAL+ F++M       + ++  S+L  C+  G      +    
Sbjct: 411 ISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAG------LLDIG 464

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVS 305
            N F   V            G E  +     ++ +  ++G +D A  +   +P E +V  
Sbjct: 465 QNYFKSMVQ---------DYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKV 515

Query: 306 WNVMIAG 312
           W  ++  
Sbjct: 516 WRALLGA 522


>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Glycine max]
          Length = 828

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 227/776 (29%), Positives = 379/776 (48%), Gaps = 88/776 (11%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LHAH++  GL  D     +L+E Y++  + HS++ +F+  P  D + +  ++        
Sbjct: 20  LHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCY----- 74

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH---ITLASV 126
               + LFD++                        +S+Y+    +G   T        SV
Sbjct: 75  --LWHHLFDQV------------------------VSLYHHHIQKGSRLTQNCTFLYPSV 108

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA + +  +  GR+ HG ++K GL  +  +  +LL +Y + G    A  VF+E+   + 
Sbjct: 109 IKAISVVGGLVVGRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDL 168

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++++++   +  R  E LEM R M+ + V  DSV++ SV   C + GC          
Sbjct: 169 VSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGC---------- 218

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             + +++VHG       I+     D  L NSL+ MY +   +  A+ +F ++ + S   W
Sbjct: 219 -LRLAKSVHG-----YVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACW 272

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG--------- 357
             MI+   Q     +AI+  ++M+    E + VT I++L  C R G +K G         
Sbjct: 273 TSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILR 332

Query: 358 REM----FDSMPS-----------------------PSVSSWNAMLSSYSQSENHKEAIK 390
           REM     D  P+                        SV SWN ++S Y++   ++EA+ 
Sbjct: 333 REMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMV 392

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF  M  +G+ PD  +LA  +S+CA    +  G+Q+H    K     D +V + L+ +YS
Sbjct: 393 LFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRG-FADEFVQNSLMDMYS 451

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   +LA  +F +I E  IV WN MI G S N + +EA   F +M  N M   + +F +
Sbjct: 452 KCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLS 511

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
            + +C+      +G+ +H ++   G   D+++ +AL++MY KCGD+  A+  F+ M  K+
Sbjct: 512 AIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKS 571

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+W+ MI  Y  +G    A  L+  M+ S +KP+++TF+ IL+AC H+G V+ G   FN
Sbjct: 572 VVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFN 631

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM+ D+G+ P  +H+  ++D L RAG    A  +I       D  IW  LL+ CR+H  +
Sbjct: 632 SMR-DYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLNGCRIHGRM 690

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            L     +EL  +   ++  Y+LL+NIY+  G W + R VR  M    + K P YS
Sbjct: 691 DLIHNIHKELREIRTNDTGYYTLLSNIYAEGGNWYESRKVRSRMEGMGLKKVPGYS 746



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 141/568 (24%), Positives = 250/568 (44%), Gaps = 92/568 (16%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H +++R  +  D  L N LI +Y +C+    A+ +F+ +       W +        
Sbjct: 223 KSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTS-------- 274

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                                  +IS+  +NG  E+A+  + KM         +T+ SV 
Sbjct: 275 -----------------------MISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVL 311

Query: 128 KASTALLDVEHGRRCHGLVIKIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                L  ++ G+  H  +++  +D  ++ +  AL+  YA C        +   +   + 
Sbjct: 312 CCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSV 371

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  ++S  A+     EA+ +F  M+ K +  DS SL+S +  CA    G  S  F   
Sbjct: 372 VSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACA----GASSVRF--- 424

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    GQQ+H    K GF AD  + NSL+DMY+K G +D A  IF  + E+S+V+W
Sbjct: 425 ---------GQQIHGHVTKRGF-ADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTW 474

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS--------------- 351
           N MI G+ Q   S +A++L   M     + +EVT ++ + AC  S               
Sbjct: 475 NCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVV 534

Query: 352 --------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                               GD+KT + +F+SMP  SV SW+AM+++Y        A  L
Sbjct: 535 SGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTL 594

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN--YVASGLIGIY 449
           F +M    +KP+  T   ILS+C   G +E GK  +  S++    + N  + AS ++ + 
Sbjct: 595 FTKMVESHIKPNEVTFMNILSACRHAGSVEEGK-FYFNSMRDYGIVPNAEHFAS-IVDLL 652

Query: 450 SKCQRNELAERVFHRIPE-LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           S+    + A  +     + +D   W +++ G  ++          K++R  E+      +
Sbjct: 653 SRAGDIDGAYEIIKSTCQHIDASIWGALLNGCRIHGRMDLIHNIHKELR--EIRTNDTGY 710

Query: 509 ATVLSSC-AKLSSSFQGRQVHAQIEKDG 535
            T+LS+  A+  + ++ R+V +++E  G
Sbjct: 711 YTLLSNIYAEGGNWYESRKVRSRMEGMG 738



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 131/307 (42%), Gaps = 49/307 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H+ + G F D F+ N L+++YSKC     A  +FDK+  K I +WN        
Sbjct: 425 GQQIHGHVTKRG-FADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNC------- 476

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I    +NG+  +AL ++++M         +T  S 
Sbjct: 477 ------------------------MICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSA 512

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A +    +  G+  H  ++  G+ K++Y+  AL+ +YAKCG  K A  VF  M E + 
Sbjct: 513 IQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSV 572

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++AM++      ++  A  +F  M+   +  + V+  ++L  C   G   E   +  S
Sbjct: 573 VSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNS 632

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA-EVIFSNLPERSVVS 305
              +                G   +     S++D+ ++ GD+D A E+I S         
Sbjct: 633 MRDY----------------GIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASI 676

Query: 306 WNVMIAG 312
           W  ++ G
Sbjct: 677 WGALLNG 683


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 221/705 (31%), Positives = 358/705 (50%), Gaps = 59/705 (8%)

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDV-----E 137
           R+   WN+L  AL   GL  +AL VYN M   G  P   T      A+ A +        
Sbjct: 69  RSAFLWNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPA 128

Query: 138 HGRRCHGLVIKIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
            G   H   ++ GL   +++  N L++ YA  G    A  VF+EM   + V++ +++S L
Sbjct: 129 KGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSAL 188

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
                + +A      M+R  + ++  SL SV+  C  E            D  F  +VHG
Sbjct: 189 LTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTE-----------RDEGFGLSVHG 237

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
                L +K G ++ ++L N+L+DMY K GD++S+  +F+ + E++ VSWN  +  +   
Sbjct: 238 -----LVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHA 292

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----------------- 359
                 +E+ + M      P  VT  ++L A V  G    G+E                 
Sbjct: 293 GFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIA 352

Query: 360 ------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                             +F+++   +V SWNAM+++ +Q+    EA  L  EMQ  G  
Sbjct: 353 NSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGEC 412

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P+  TL  +L +C+ +  ++ GKQ+HA S+  +   D +V++ LI +Y+KC +  +A+ +
Sbjct: 413 PNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDI 472

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F R  E D V +N++I G S +    E+   F+QMR   +     SF   LS+CA LS+ 
Sbjct: 473 FDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAF 531

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
            QG+++H  + +       F+ ++L+++Y K G +  A + F+ +  K+  +WN MI GY
Sbjct: 532 KQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGY 591

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
             +G  D A  L+  M   GV  D ++++A+L+ACSH GLVD G + F+ M +   ++P 
Sbjct: 592 GMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQM-IAQNIKPQ 650

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
             HY CM+D LGRAG   E+  +I  MP   +  +W  LL SCR+H ++ LA+ AAE LF
Sbjct: 651 QMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLF 710

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            L P++S  Y+LL N+YS  G W++   ++ LM    + K+PAYS
Sbjct: 711 ELKPEHSGYYTLLRNMYSESGMWNEANEIKTLMKSRKVQKNPAYS 755



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 156/515 (30%), Positives = 255/515 (49%), Gaps = 54/515 (10%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+++ N +++          A ++FDEMP R++VSWN+L+SAL+ NG+ E A      M 
Sbjct: 146 DVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMM 205

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             G      +L SV  A     D   G   HGLV+K GLD  + + NAL+ +Y K G  +
Sbjct: 206 RSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLE 265

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            ++ VF  M E NEV++ + +   A      + LEMFR+M    V+  SV+LSS+L    
Sbjct: 266 SSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALV 325

Query: 233 REGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
             G                   H G++VH  +I+   E+D+ ++NSL+DMYAK G ++ A
Sbjct: 326 DLGY-----------------FHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKA 368

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
             IF N+  R+VVSWN MIA   Q    T+A  L+  M+  G  P+  T +N+L AC R 
Sbjct: 369 SAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRV 428

Query: 352 GDIKTGRE-----------------------------------MFDSMPSPSVSSWNAML 376
             +K G++                                   +FD      V S+N ++
Sbjct: 429 ASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDDV-SYNTLI 487

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
             YSQS+   E++ LF++M+  G++ D  +    LS+CA +   + GK++H   ++   +
Sbjct: 488 VGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLN 547

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
              ++A+ L+ +Y+K      A ++F+RI   D+  WN+MI G  ++     AF  F  M
Sbjct: 548 THPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLM 607

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
           + + +     S+  VLS+C+      +G++  +Q+
Sbjct: 608 KDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQM 642



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 156/619 (25%), Positives = 282/619 (45%), Gaps = 73/619 (11%)

Query: 140 RRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEE--MSEPNEVTFTAMMSGL 196
           RR H   +  G L  ++ +A ALL  YA       A  +     +   +   + ++   L
Sbjct: 22  RRAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRAL 81

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           A      EAL ++  M+R  V  D  +    L               A    +      G
Sbjct: 82  ASAGLPSEALRVYNCMVRSGVRPDDRTFPFAL-----------HAAAAAVVAEAEHPAKG 130

Query: 257 QQVHCLTIKLGFE-ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY-- 313
            ++H   ++ G   AD+   N+L+  YA  G    A  +F  +P R +VSWN +++    
Sbjct: 131 AELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLT 190

Query: 314 -GQKYQSTKAI-------------ELLQRMKSCGFEPDEV---------------TSINM 344
            G    + +A+              L+  + +CG E DE                + +N+
Sbjct: 191 NGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNL 250

Query: 345 LVACV----RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
             A V    + GD+++   +F+ M   +  SWN+ L  ++ +  H++ +++FR M    V
Sbjct: 251 GNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEV 310

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
            P   TL+ +L +   +G    GK+VH  S++ A   D ++A+ L+ +Y+K    E A  
Sbjct: 311 TPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASA 370

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           +F  I   ++V WN+MIA L+ N  + EAF    +M++N   P  F+   +L +C++++S
Sbjct: 371 IFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVAS 430

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G+Q+HA       ++D+FV +ALI++Y KCG +  A+  FD    K+ V++N +I G
Sbjct: 431 VKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSE-KDDVSYNTLIVG 489

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV-- 638
           Y+Q+    E++ L++ M ++G++ D ++F+  L+AC++      G EI       HGV  
Sbjct: 490 YSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEI-------HGVLV 542

Query: 639 ------EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
                  P L +   ++D   + G    A  + + +  + D   W  ++    +H  + +
Sbjct: 543 RRLLNTHPFLAN--SLLDLYTKGGMLATASKIFNRI-TRKDVASWNTMILGYGMHGQIDV 599

Query: 693 AKRAAEELFRLDPKNSAPY 711
           A     ELF L   +   Y
Sbjct: 600 AF----ELFDLMKDDGVDY 614



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 191/419 (45%), Gaps = 55/419 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H + +R  +  D F+ N L+++Y+K      A  +F+ +  +++ SWNA       
Sbjct: 333 GKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNA------- 385

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I+ L +NG E +A S+  +M   G  P   TL ++
Sbjct: 386 ------------------------MIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNL 421

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + +  V+ G++ H   I   L  +++V+NAL+ +YAKCG    A  +F+  SE ++
Sbjct: 422 LPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDD 480

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  ++ G +++    E+L +F+ M    +  D+VS    L  CA              
Sbjct: 481 VSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACA-------------- 526

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S    G+++H + ++        L+NSLLD+Y K G + +A  IF+ +  + V SW
Sbjct: 527 --NLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASW 584

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N MI GYG   Q   A EL   MK  G + D V+ I +L AC   G +  G++ F  M +
Sbjct: 585 NTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIA 644

Query: 367 ----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               P    +  M+    ++    E++++   M F     +      +L SC   G +E
Sbjct: 645 QNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPF---PANSDVWGALLGSCRIHGDIE 700



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 200/454 (44%), Gaps = 83/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +L++GL     L N L+++Y K  +  S+  +F+ M  K+  SWN+ L     
Sbjct: 232 GLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGC--- 288

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                FA+                        G  E  L ++  MS     P  +TL+S+
Sbjct: 289 -----FAHA-----------------------GFHEDVLEMFRVMSEHEVTPGSVTLSSL 320

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L     G+  HG  I+  ++ +I++AN+L+ +YAK G  + A  +FE +   N 
Sbjct: 321 LPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNV 380

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ AM++ LA+     EA  +   M +     +S +L ++L  C+R             
Sbjct: 381 VSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSR------------- 427

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+Q+H  +I     +DL +SN+L+D+YAK G +  A+ IF    E+  VS+
Sbjct: 428 ---VASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSY 483

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------- 359
           N +I GY Q     +++ L Q+M+S G E D V+ +  L AC      K G+E       
Sbjct: 484 NTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVR 543

Query: 360 ----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +F+ +    V+SWN M+  Y        A +L
Sbjct: 544 RLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFEL 603

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           F  M+  GV  D  +   +LS+C+  G+++ GK+
Sbjct: 604 FDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKK 637


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 202/671 (30%), Positives = 346/671 (51%), Gaps = 55/671 (8%)

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
           F P H  L       T   ++  GR  H  ++K G   +IYV N  L+LYAK     HA+
Sbjct: 7   FPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHAL 66

Query: 176 PVFEEMSE--PNEVTFTAMMSGLAKTDRVVE---ALEMFRLMIRKAVSIDSVSLSSVLGV 230
            +F+ +++   ++V++ ++++  ++         A+ +FR M+R    I +         
Sbjct: 67  TLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAH------- 119

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
                    + VF+ + N  S  V G+Q H + +K G   D+++ +SLL+MY K G +  
Sbjct: 120 -------TLAGVFSAASN-LSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFD 171

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A  +F  +PER+ VSW  MI+GY     + KA+E+ + M+      +E    ++L A   
Sbjct: 172 ARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTS 231

Query: 351 SGDIKTGREM-----------------------------------FDSMPSPSVSSWNAM 375
              + TGR++                                   F+     +  +W+AM
Sbjct: 232 DVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAM 291

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           ++ Y+Q  +  +A+KLF +M   GV P   TL  ++++C+ +  +  GKQ+H+ + K   
Sbjct: 292 VTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGF 351

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
            +  YV S ++ +Y+KC     A + F  + + D+V W S+I G   N         + +
Sbjct: 352 GLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGK 411

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M+   + P + + A+VL +C+ L++  QG+Q+HA+I K G+  ++ +GSAL  MY KCG 
Sbjct: 412 MQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGS 471

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +      F  M  ++ ++WN MI G +QNG+G++A+ L++ M+  G+KPD +TFV +L+A
Sbjct: 472 LDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSA 531

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           CSH GLVD G E F  M  +  + P+++HY CM+D L RAG  +EA+  I+         
Sbjct: 532 CSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLC 591

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMS 735
           +W +LL +C+ H N  L   A E+L  L    S+ Y LL++IY++LG  +++  VR +M 
Sbjct: 592 LWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMK 651

Query: 736 ENCIVKDPAYS 746
              + K+P  S
Sbjct: 652 ARGVNKEPGCS 662



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 161/553 (29%), Positives = 273/553 (49%), Gaps = 84/553 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G+ LHA IL+ G     ++ N  + LY+K N+   A  LFD +   D           
Sbjct: 28  LKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDND----------- 76

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK---ALSVYNKMSN-EGFVPTH 120
              DD                VSWN+LI+A  +N        A+S++ +M      +P  
Sbjct: 77  --KDD----------------VSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNA 118

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            TLA VF A++ L DV  G++ H + +K G   ++YV ++LL++Y K G+   A  +F+ 
Sbjct: 119 HTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDR 178

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M E N V++  M+SG A +D   +A+E+F LM R+    +  +L+SVL         + S
Sbjct: 179 MPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLS-------ALTS 231

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           DVF  +         G+QVH L IK G  A + ++N+L+ MYAK G +D A   F    +
Sbjct: 232 DVFVYT---------GRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGD 282

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------ 348
           ++ ++W+ M+ GY Q   S KA++L  +M S G  P E T + ++ AC            
Sbjct: 283 KNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQM 342

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G +   R+ F+ +  P V  W ++++ Y Q+ ++
Sbjct: 343 HSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDY 402

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +  + L+ +MQ   V P+  T+A +L +C+++  L+ GKQ+HA  +K    ++  + S L
Sbjct: 403 EGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSAL 462

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
             +Y+KC   +    +F R+P  D++ WN+MI+GLS N    +A   F++M    + P  
Sbjct: 463 SAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDP 522

Query: 506 FSFATVLSSCAKL 518
            +F  +LS+C+ +
Sbjct: 523 VTFVNLLSACSHM 535



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 208/454 (45%), Gaps = 82/454 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           VAGK  H+  ++ G   D ++ + L+ +Y K      A+ LFD+MP ++  SW  ++S  
Sbjct: 135 VAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGY 194

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
             SD                               + +KA+ V+  M  E  +     L 
Sbjct: 195 ASSD-------------------------------IADKAVEVFELMRREEEIQNEFALT 223

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV  A T+ + V  GR+ H L IK GL   + VANAL+++YAKCG    AV  FE   + 
Sbjct: 224 SVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDK 283

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N +T++AM++G A+     +AL++F  M    V     +L  V+  C+ + C V      
Sbjct: 284 NSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACS-DLCAV------ 336

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                    V G+Q+H    KLGF   L++ ++++DMYAK G +  A   F  + +  VV
Sbjct: 337 ---------VEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVV 387

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
            W  +I GY Q       + L  +M+     P+E+T  ++L AC                
Sbjct: 388 LWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARI 447

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + G +  G  +F  MPS  V SWNAM+S  SQ+ +  +A+
Sbjct: 448 IKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKAL 507

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +LF +M   G+KPD  T   +LS+C+ MG+++ G
Sbjct: 508 ELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRG 541



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 215/466 (46%), Gaps = 66/466 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ +H+  ++NGL     + N L+ +Y+KC +                           
Sbjct: 237 TGRQVHSLAIKNGLLAIVSVANALVTMYAKCGS--------------------------- 269

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               L+ A + F+   ++N ++W+ +++   + G  +KAL ++NKM + G +P+  TL  
Sbjct: 270 ----LDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVG 325

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A + L  V  G++ H    K+G    +YV +A++ +YAKCG    A   FE + +P+
Sbjct: 326 VINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPD 385

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +T++++G  +       L ++  M  + V  + ++++SVL  C+           A 
Sbjct: 386 VVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSS---------LAA 436

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D        G+Q+H   IK GF+ ++ + ++L  MY K G +D   +IF  +P R V+S
Sbjct: 437 LD-------QGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVIS 489

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM- 364
           WN MI+G  Q     KA+EL ++M   G +PD VT +N+L AC   G +  G E F  M 
Sbjct: 490 WNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMF 549

Query: 365 ----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA----- 415
                +P V  +  M+   S++    EA +         V        I+L +C      
Sbjct: 550 DEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESAT---VDHGLCLWRILLGACKNHRNY 606

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            +G+    K V   S ++++++       L  IY+     E  ERV
Sbjct: 607 ELGVYAGEKLVELGSPESSAYVL------LSSIYTALGDRENVERV 646



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 113/233 (48%), Gaps = 31/233 (13%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V GK +H+   + G     ++ + ++++Y+KC +   A+  F+ +   D+  W +I++
Sbjct: 335 AVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIIT 394

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                            V+NG  E  L++Y KM  E  +P  +T
Sbjct: 395 -------------------------------GYVQNGDYEGGLNLYGKMQMERVIPNELT 423

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           +ASV +A ++L  ++ G++ H  +IK G    + + +AL ++Y KCG       +F  M 
Sbjct: 424 MASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMP 483

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
             + +++ AM+SGL++     +ALE+F  M+ + +  D V+  ++L  C+  G
Sbjct: 484 SRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMG 536


>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 754

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 202/711 (28%), Positives = 362/711 (50%), Gaps = 54/711 (7%)

Query: 72  FAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
           F+  LF  +  +++  WN++I +   NG  ++A   Y +M     +P   T+  V     
Sbjct: 60  FSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCA 119

Query: 132 ALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
            L+   HG   HGL  K+GL   N  + ++ + +Y+KCG  + A  +F E++  + VT+T
Sbjct: 120 ELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWT 179

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           A++ G  + +     L+    M R   + +  ++ S    C      V+ D         
Sbjct: 180 ALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQAC------VDLDAL------- 226

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
              V G+ +H L +K GF     + +++L MY++ G  + A   F  L ++ ++SW  +I
Sbjct: 227 ---VEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSII 283

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA---------------------CV 349
           A + +    ++ + L   M++    PDE+    ML+                      C 
Sbjct: 284 AVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCA 343

Query: 350 RSG--------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
            SG               + T  ++F S    S   W+ M+  YS     ++ I   REM
Sbjct: 344 LSGITHNALLSMYCKFGHLGTANKIFHSFHKSS-EDWSTMILGYSNMGQKEKCISFLREM 402

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
              G +PD  +L  ++SSC+ +G +  G+ +H  ++K +   +  VA+ L+ +Y K    
Sbjct: 403 LLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHV 462

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
               R+FHR  + D++ WN++I+    + +  EA + F +M + ++YP + +   VLS+C
Sbjct: 463 TATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSAC 522

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           A L+S  +G ++H  I+++G+ ++I + +ALI+MY KCG++  +R+ F+    ++ + WN
Sbjct: 523 AHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWN 582

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI  Y  +G+ + A+ +++ M  S +KP+  TF+++L+AC+H+G V  G  +F+ MQ  
Sbjct: 583 VMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQ-K 641

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           +G+EP L HY  +ID LGR+G    AE L+  MP   D  +W  LLS+C++H    +  R
Sbjct: 642 YGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVR 701

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            A      DPKN   Y +L+++YS LGRWD++  VR++M +  + K   +S
Sbjct: 702 LARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWS 752



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/576 (25%), Positives = 255/576 (44%), Gaps = 53/576 (9%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   +E A  +F E+  ++VV+W  LI   V+N    + L    +M   G  P + T+ S
Sbjct: 156 KCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGS 215

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
            F+A   L  +  G+  HGL +K G      V + +LS+Y++CG  + A   F ++ + +
Sbjct: 216 GFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKD 275

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++T++++  +K   + E L +F  M    +  D + +S     C   G       F  
Sbjct: 276 LISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVIS-----CMLMG-------FGN 323

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           SD  F     G+  H   +K          N+LL MY K G + +A  IF +   +S   
Sbjct: 324 SDRIFE----GKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSF-HKSSED 378

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------- 358
           W+ MI GY    Q  K I  L+ M   G EPD  + ++++ +C + G I  GR       
Sbjct: 379 WSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAI 438

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +F       V SWN ++SSY QS    EAI 
Sbjct: 439 KNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAII 498

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF +M    V P++ T  I+LS+CA +  L+ G+++H    +     +  + + LI +Y+
Sbjct: 499 LFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYA 558

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   E + ++F+   E D++ WN MI+   ++     A   F+ M ++ + P   +F +
Sbjct: 559 KCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLS 618

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF-FDMMHGK 569
           +LS+C       +GR +  +++K G    +   +++I++  + G +  A      M    
Sbjct: 619 LLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITP 678

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           +   W  ++     +   +  VRL +  I S  K D
Sbjct: 679 DGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKND 714



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 118/518 (22%), Positives = 215/518 (41%), Gaps = 84/518 (16%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V GK LH   L+NG      + + ++ +YS+C +   A   F K+  KD+ SW +I++
Sbjct: 225 ALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIA 284

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              K                                GL  + L ++ +M     +P  I 
Sbjct: 285 VHSKF-------------------------------GLMSECLHLFWEMQASEIIPDEIV 313

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           ++ +         +  G+  H  ++K     +    NALLS+Y K G    A  +F    
Sbjct: 314 ISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFH 373

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           + +E  ++ M+ G +   +  + +   R M+      D  SL SV+  C++ G       
Sbjct: 374 KSSE-DWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVG------- 425

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                   + N+ G+ +HC  IK     ++ ++NSL+DMY K+G + +   IF    +R 
Sbjct: 426 --------AINI-GRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRD 476

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------- 348
           V+SWN +I+ Y Q     +AI L  +M      P++VT I +L AC              
Sbjct: 477 VISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQ 536

Query: 349 ---------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                 + G+++T R++F+S     V  WN M+S+Y    + + 
Sbjct: 537 YIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVES 596

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+++F+ M+   +KP+  T   +LS+C   G +  G+ +     K          + +I 
Sbjct: 597 AMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIID 656

Query: 448 IYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS 484
           +  +    E AE +   +P   D   W S+++   +++
Sbjct: 657 LLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHN 694



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 1/191 (0%)

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H+  + T +  + + A+ L+  Y+  ++   +  +F  I   DI  WNS+I     N   
Sbjct: 30  HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDY 89

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG-YVNDIFVGSA 545
             AF F+ QMR +   P QF+   V+S+CA+L     G  +H    K G +V +  +GS+
Sbjct: 90  QRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSS 149

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
            I MY KCG +  A   F  +  K+ VTW  +I GY QN      ++   +M   G  P+
Sbjct: 150 FIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPN 209

Query: 606 DITFVAILTAC 616
             T  +   AC
Sbjct: 210 YKTIGSGFQAC 220


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 210/654 (32%), Positives = 352/654 (53%), Gaps = 67/654 (10%)

Query: 135 DVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE-VTFTAM 192
           D+  GR  H  +++  L D++  VAN+LL+LY++CG    A  VF+ M    + V++TAM
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
            S LA+     E+L +   M+   +  ++ +L +V   C         +++         
Sbjct: 123 ASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHAC------FPHELYCLVGGVVLG 176

Query: 253 NVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
            VH         K+G +  D+ + ++L+DM A+NGD+ SA  +F  L E++VV W ++I+
Sbjct: 177 LVH---------KMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLIS 227

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----------- 360
            Y Q   + +A+E+       GFEPD  T  +M+ AC   G ++ G ++           
Sbjct: 228 RYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFAS 287

Query: 361 ---------------------------FDSMPSPSVSSWNAMLSSYSQSE-NHKEAIKLF 392
                                      F+ M    V SW A++S Y QS     + + LF
Sbjct: 288 DACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLF 347

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
            EM    +KP+  T + IL +CA +   +SG+QVHA  +K+     + V + L+ +Y++ 
Sbjct: 348 GEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAES 407

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              E A RVF+++ E  ++   S I       LD        ++ + +M  +  +FA+++
Sbjct: 408 GCMEEARRVFNQLYERSMI---SCITEGRDAPLD-------HRIGRMDMGISSSTFASLI 457

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           S+ A +    +G+Q+HA   K G+ +D FV ++L+ MY +CG +  A + F+ +  +N +
Sbjct: 458 SAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVI 517

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +W  MI G A++GY + A+ L+ DMI +GVKP+D+T++A+L+ACSH GLV  G E F SM
Sbjct: 518 SWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSM 577

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
           Q DHG+ P ++HY CM+D L R+G   EA   I+EMP K D ++W+ LL +CR H N+ +
Sbjct: 578 QRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEV 637

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + AA+ +  L+P++ APY LL+N+Y+  G WD++  +R  M +N + K+   S
Sbjct: 638 GEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLS 691



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 158/612 (25%), Positives = 286/612 (46%), Gaps = 92/612 (15%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ LH  +LR  L D D  + N L+ LYS+C    SA+++FD M                
Sbjct: 67  GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGM---------------- 110

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                            R++VSW  + S L RNG E ++L +  +M   G +P   TL +
Sbjct: 111 --------------RGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGLLPNAYTLCA 156

Query: 126 VFKASTALLDVEHGRRCHGLVI------KIGL-DKNIYVANALLSLYAKCGWTKHAVPVF 178
           V  A        H   C    +      K+GL   +I V +AL+ + A+ G    A  VF
Sbjct: 157 VAHAC-----FPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVF 211

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           + + E   V +T ++S   + +   EA+E+F   +      D  ++SS++  C   G   
Sbjct: 212 DGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELG--- 268

Query: 239 ESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNG---DMDSAEVI 294
                         +V  G Q+H L +++GF +D  +S  L+DMYAK+     MD A  +
Sbjct: 269 --------------SVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKV 314

Query: 295 FSNLPERSVVSWNVMIAGYGQK-YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           F  + +  V+SW  +I+GY Q   Q  K + L   M +   +P+ +T  ++L AC    D
Sbjct: 315 FERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISD 374

Query: 354 IKTGRE----MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV--------- 400
             +GR+    +  S  + + +  NA++S Y++S   +EA ++F ++  R +         
Sbjct: 375 HDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRD 434

Query: 401 KP------------DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
            P              +T A ++S+ A++G+L  G+Q+HA +LK     D +V++ L+ +
Sbjct: 435 APLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSM 494

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           YS+C   E A R F+ + + +++ W SMI+GL+ +     A   F  M    + P   ++
Sbjct: 495 YSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTY 554

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
             VLS+C+ +    +G++    +++D G +  +   + ++++  + G +  A +F + M 
Sbjct: 555 IAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMP 614

Query: 568 GK-NTVTWNEMI 578
            K + + W  ++
Sbjct: 615 LKADALVWKTLL 626



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/310 (20%), Positives = 143/310 (46%), Gaps = 57/310 (18%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H +G+ +HAH++++       + N L+ +Y+                             
Sbjct: 375 HDSGRQVHAHVIKSNQAAAHTVGNALVSMYA----------------------------- 405

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             +S  +E A ++F+++ ER+++S             E +   + +++       +  T 
Sbjct: 406 --ESGCMEEARRVFNQLYERSMISCIT----------EGRDAPLDHRIGRMDMGISSSTF 453

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           AS+  A+ ++  +  G++ H + +K G   + +V+N+L+S+Y++CG+ + A   F E+ +
Sbjct: 454 ASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKD 513

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N +++T+M+SGLAK      AL +F  MI   V  + V+  +VL  C+  G        
Sbjct: 514 RNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVG-------L 566

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS- 302
            +   ++ R++  Q+ H L  ++   A       ++D+ A++G +  A    + +P ++ 
Sbjct: 567 VREGKEYFRSM--QRDHGLIPRMEHYA------CMVDLLARSGLVKEALEFINEMPLKAD 618

Query: 303 VVSWNVMIAG 312
            + W  ++  
Sbjct: 619 ALVWKTLLGA 628


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 223/784 (28%), Positives = 381/784 (48%), Gaps = 86/784 (10%)

Query: 1   KKAHVAGKLLHAHILRN-GLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           ++A   G+ LH+ I +    F+  FL  +L+ +Y KC +                     
Sbjct: 93  RRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSL-------------------- 132

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
                   DD E   K+FDEMP+R   +WN +I A V NG    AL++Y  M  EG    
Sbjct: 133 --------DDAE---KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             +  ++ KA   L D+  G   H L++K+G     ++ NAL+S+YAK      A  +F+
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241

Query: 180 EMSEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
              E  + V + +++S  + + + +E LE+FR M     + +S ++ S L  C       
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC------- 294

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                    + FS    G+++H   +K     ++L++ N+L+ MY + G M  AE I   
Sbjct: 295 ---------DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +    VV+WN +I GY Q     +A+E    M + G + DEV+  +++ A  R  ++  G
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405

Query: 358 REM-----------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
            E+                                   F  M    + SW  +++ Y+Q+
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
           + H EA++LFR++  + ++ D   L  IL + + +  +   K++H   L+    +D  + 
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQ 524

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + L+ +Y KC+    A RVF  I   D+V W SMI+  +LN  + EA   F++M +  + 
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
               +   +LS+ A LS+  +GR++H  + + G+  +  +  A+++MY  CGD+  A+  
Sbjct: 585 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 644

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           FD +  K  + +  MI+ Y  +G G  AV L+  M    V PD I+F+A+L ACSH+GL+
Sbjct: 645 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 704

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D G      M+ ++ +EP  +HY C++D LGRA    EA   +  M  +    +W  LL+
Sbjct: 705 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLA 764

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           +CR H+   + + AA+ L  L+PKN     L++N+++  GRW+D+  VR  M  + + K 
Sbjct: 765 ACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKH 824

Query: 743 PAYS 746
           P  S
Sbjct: 825 PGCS 828



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 149/324 (45%), Gaps = 23/324 (7%)

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +PSP ++ ++ +L+            + F+ +            A +L  C     +  G
Sbjct: 52  VPSPKLACFDGVLT------------EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQG 99

Query: 424 KQVHAASLKTASHID-NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           +Q+H+   KT    + +++A  L+ +Y KC   + AE+VF  +P+     WN+MI     
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           N     A   +  MR   +     SF  +L +CAKL     G ++H+ + K GY +  F+
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
            +AL+ MY K  D+  AR+ FD    K + V WN ++  Y+ +G   E + L+++M  +G
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSM--QLDHGVEPILDHYTC--MIDCLGRAGH 657
             P+  T V+ LTAC       +G EI  S+     H  E     Y C  +I    R G 
Sbjct: 280 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL----YVCNALIAMYTRCGK 335

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLL 681
             +AE ++ +M    D V W  L+
Sbjct: 336 MPQAERILRQMN-NADVVTWNSLI 358


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 210/654 (32%), Positives = 351/654 (53%), Gaps = 67/654 (10%)

Query: 135 DVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE-VTFTAM 192
           D+  GR  H  +++  L D++  VAN+LL+LY++CG    A  VF+ M    + V++TAM
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
            S LA+      +L +   M+   +      L +   +CA        +++         
Sbjct: 123 ASCLARNGAERGSLLLIGEMLESGL------LPNAYTLCAAAHACFPHELYCLVGGVVLG 176

Query: 253 NVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
            VH         K+G +  D+ + ++L+DM A+NGD+ SA  +F  L E++VV W ++I+
Sbjct: 177 LVH---------KMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLIS 227

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----------- 360
            Y Q   + +A+EL       GFEPD  T  +M+ AC   G ++ G ++           
Sbjct: 228 RYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLAS 287

Query: 361 ---------------------------FDSMPSPSVSSWNAMLSSYSQSE-NHKEAIKLF 392
                                      F+ MP   V SW A++S Y QS     + + LF
Sbjct: 288 DACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALF 347

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
            EM    +KP+  T + IL SCA++   +SG+QVHA  +K+     + V + L+ +Y++ 
Sbjct: 348 GEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAES 407

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              E A RVF+++ E       SMI  ++    +   F    ++ + ++  +  +FA+++
Sbjct: 408 GCMEEARRVFNQLYE------RSMIPCIT----EGRDFPLDHRIVRMDVGISSSTFASLI 457

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           S+ A +    +G+Q+HA   K G+ +D FV ++L+ MY +CG +  A + F+ +  +N +
Sbjct: 458 SAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVI 517

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +W  MI G A++GY + A+ L+ DMI +GVKP+D+T++A+L+ACSH GLV  G E F SM
Sbjct: 518 SWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSM 577

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
           Q DHG+ P ++HY CM+D L R+G   EA   I+EMP K D ++W+ LL +CR H N+ +
Sbjct: 578 QRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEV 637

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +  A+ +  L+P++ APY LL+N+Y+  G WD++  +R  M +N + K+   S
Sbjct: 638 GEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLS 691



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 156/612 (25%), Positives = 284/612 (46%), Gaps = 92/612 (15%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ LH  +LR  L D D  + N L+ LYS+C    SA+++FD M                
Sbjct: 67  GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGM---------------- 110

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                            R++VSW  + S L RNG E  +L +  +M   G +P   TL +
Sbjct: 111 --------------RGLRDIVSWTAMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCA 156

Query: 126 VFKASTALLDVEHGRRCHGLVI------KIGL-DKNIYVANALLSLYAKCGWTKHAVPVF 178
              A        H   C    +      K+GL   ++ V +AL+ + A+ G    A  VF
Sbjct: 157 AAHAC-----FPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARNGDLASARKVF 211

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           + + E   V +T ++S   + +   EA+E+F   +      D  ++SS++  C   G   
Sbjct: 212 DGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELG--- 268

Query: 239 ESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNG---DMDSAEVI 294
                         +V  G Q+H L +++G  +D  +S  L+DMYAK+     MD A  +
Sbjct: 269 --------------SVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKV 314

Query: 295 FSNLPERSVVSWNVMIAGYGQK-YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           F  +P+  V+SW  +I+GY Q   Q  K + L   M +   +P+ +T  ++L +C    D
Sbjct: 315 FERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISD 374

Query: 354 IKTGRE----MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP------- 402
             +GR+    +  S  + + +  NA++S Y++S   +EA ++F ++  R + P       
Sbjct: 375 HDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRD 434

Query: 403 --------------DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
                           +T A ++S+ A++G+L  G+Q+HA SLK     D +V++ L+ +
Sbjct: 435 FPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSM 494

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           YS+C   E A R F+ + + +++ W SMI+GL+ +     A   F  M    + P   ++
Sbjct: 495 YSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTY 554

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
             VLS+C+ +    +G++    +++D G +  +   + ++++  + G +  A +F + M 
Sbjct: 555 IAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMP 614

Query: 568 GK-NTVTWNEMI 578
            K + + W  ++
Sbjct: 615 LKADALVWKTLL 626



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 205/424 (48%), Gaps = 63/424 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH+  LR GL  D  +   L+++Y+K N   +                         
Sbjct: 273 GLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQA------------------------- 307

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEE-KALSVYNKMSNEGFVPTHITLAS 125
              +++A K+F+ MP+ +V+SW  LIS  V++G++E K ++++ +M NE   P HIT +S
Sbjct: 308 ---MDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSS 364

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           + K+  ++ D + GR+ H  VIK        V NAL+S+YA+ G  + A  VF ++ E +
Sbjct: 365 ILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERS 424

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +             R+V          R  V I S + +S++   A  G   +      
Sbjct: 425 MIPCITEGRDFPLDHRIV----------RMDVGISSSTFASLISAAASVGMLTK------ 468

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     GQQ+H +++K GF +D  +SNSL+ MY++ G ++ A   F+ L +R+V+S
Sbjct: 469 ----------GQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVIS 518

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  MI+G  +   + +A+ L   M   G +P++VT I +L AC   G ++ G+E F SM 
Sbjct: 519 WTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQ 578

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P +  +  M+   ++S   KEA++   EM    +K D      +L +C +   +
Sbjct: 579 RDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMP---LKADALVWKTLLGACRSHDNI 635

Query: 421 ESGK 424
           E G+
Sbjct: 636 EVGE 639



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/310 (20%), Positives = 141/310 (45%), Gaps = 57/310 (18%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H +G+ +HAH++++       + N L+ +Y++      A+ +F+++  + +         
Sbjct: 375 HDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIP------- 427

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
            C ++  +F         +  +V  +  IS+                           T 
Sbjct: 428 -CITEGRDFPL-------DHRIVRMDVGISS--------------------------STF 453

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           AS+  A+ ++  +  G++ H + +K G   + +V+N+L+S+Y++CG+ + A   F E+ +
Sbjct: 454 ASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKD 513

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N +++T+M+SGLAK      AL +F  MI   V  + V+  +VL  C+  G        
Sbjct: 514 RNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVG-------L 566

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS- 302
            +   ++ R++  Q+ H L  ++   A       ++D+ A++G +  A    + +P ++ 
Sbjct: 567 VREGKEYFRSM--QRDHGLIPRMEHYA------CMVDLLARSGIVKEALEFINEMPLKAD 618

Query: 303 VVSWNVMIAG 312
            + W  ++  
Sbjct: 619 ALVWKTLLGA 628



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 44/209 (21%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA  L+ G   D F+ N L+ +YS+C                              
Sbjct: 469 GQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGY---------------------------- 500

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              LE A + F+E+ +RNV+SW ++IS L ++G  E+ALS+++ M   G  P  +T  +V
Sbjct: 501 ---LEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAV 557

Query: 127 FKASTALLDVEHGR-------RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             A + +  V  G+       R HGL+ ++      Y    ++ L A+ G  K A+    
Sbjct: 558 LSACSHVGLVREGKEYFRSMQRDHGLIPRM----EHYA--CMVDLLARSGIVKEALEFIN 611

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
           EM    +      + G  ++   +E  E+
Sbjct: 612 EMPLKADALVWKTLLGACRSHDNIEVGEI 640


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 217/685 (31%), Positives = 327/685 (47%), Gaps = 127/685 (18%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT---------- 188
            R  H  +I  G     +  N LL +Y K     +A  +FEE+  P+ +           
Sbjct: 32  ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCA 91

Query: 189 -----------------------FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
                                  + AM++G A       ALE+FR M R     D  + +
Sbjct: 92  LGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFT 151

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE-ADLHLSNSLLDMYAK 284
           SVL             +F  ++ +        Q+HC  +K G       + N+LL +Y K
Sbjct: 152 SVLSALV---------LFVGNEQQCG------QMHCAVVKTGMGCVSSSVLNALLSVYVK 196

Query: 285 NGD--------MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
                      M SA  +F  +P+R                                   
Sbjct: 197 RASELGIPCSAMVSARKLFDEMPKR----------------------------------- 221

Query: 337 DEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           DE+T   M+   VR+ D+   RE+F++M     ++WNAM+S Y      +EA+ L R+M+
Sbjct: 222 DELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMR 281

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY----VASGLIGIYSKC 452
           F G++ D  T   I+S+CA +G  + GKQ+HA  LK   + ++     V++ LI +Y K 
Sbjct: 282 FLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKN 341

Query: 453 QRNELAERVFHRIPELDIVCWNS-------------------------------MIAGLS 481
            + + A ++F+ +P  +I+ WN+                               MI+GL+
Sbjct: 342 NKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLA 401

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N    E    FKQMR +   P  F+FA  L++C+ L +   GRQ+HAQ+   GY + + 
Sbjct: 402 QNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLS 461

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           VG+A+I MY KCG +  A   F  M   + V+WN MI    Q+G+G +A+ L+  M+  G
Sbjct: 462 VGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEG 521

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           V PD ITF+ +LTACSH+GLV+ G   FNSM   +G+ P  DHY  M+D   RAG F  A
Sbjct: 522 VFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYA 581

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
            ++ID MP K    +WE LL+ CR+H N+ L   AAE+LF+L P+N   Y LL+NIY+ +
Sbjct: 582 RIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADV 641

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           GRW+D+  VR+LM +  + K+PA S
Sbjct: 642 GRWNDVAKVRKLMRDQAVRKEPACS 666



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 169/646 (26%), Positives = 299/646 (46%), Gaps = 108/646 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            + +HAH++ +G        NRL+E+Y K +N   A+ LF+++P+ D  +   +++A C 
Sbjct: 32  ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCA 91

Query: 67  SDDLEFAYKLFDEMP--ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
             +LE   ++F+  P   R+ V +N +I+    NG    AL ++  M  + F P   T  
Sbjct: 92  LGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFT 151

Query: 125 SVFKASTALLDVEHGRRC---HGLVIKIGLD-KNIYVANALLSLYAK--------CGWTK 172
           SV   S  +L V + ++C   H  V+K G+   +  V NALLS+Y K        C    
Sbjct: 152 SVL--SALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMV 209

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI------------------- 213
            A  +F+EM + +E+T+T M++G  + D +  A E+F  M+                   
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269

Query: 214 --------RK----AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
                   RK     +  D ++ ++++  CA  G              F     G+Q+H 
Sbjct: 270 FQEALTLCRKMRFLGIQFDDITYTTIISACANVG-------------SFQM---GKQMHA 313

Query: 262 LTIKLGFEAD----LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
             +K     +    L +SN+L+ +Y KN  +D A  IF  +P R++++WN +++GY    
Sbjct: 314 YILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGY---- 369

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                                          V +G ++  +  F+ MP  ++ +   M+S
Sbjct: 370 -------------------------------VNAGRMEEAKSFFEEMPVKNLLTLTVMIS 398

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
             +Q+    E +KLF++M+  G +P     A  L++C+ +G LE+G+Q+HA  +      
Sbjct: 399 GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYES 458

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
              V + +I +Y+KC   E AE VF  +P +D+V WNSMIA L  +   ++A   F QM 
Sbjct: 459 SLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQML 518

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQ-VHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           +  ++P + +F TVL++C+      +GR   ++ +E  G        + +++++C+ G  
Sbjct: 519 KEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMF 578

Query: 557 YGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGD----EAVRLYKDM 597
             AR   D M  K     W  ++ G   +G  D     A +L+K M
Sbjct: 579 SYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLM 624


>gi|413951361|gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
          Length = 917

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 213/729 (29%), Positives = 366/729 (50%), Gaps = 62/729 (8%)

Query: 56  SWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG 115
           +WNA++    K  +   A  +F  MP R+  SWN++IS  + NGL E +   + +MS   
Sbjct: 200 AWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSACYFREMSCSI 259

Query: 116 FVPTHITLASVFKASTALLDV-EHGRRCHGLVIKIGLD--KNIYVANALLSLYAKCGWTK 172
           F P  ++L+SV  A + L D+   G   H   +K+G +   +  VAN+L++ Y++ G  +
Sbjct: 260 FQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVANSLVTFYSEFGMPE 319

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF      N V++ AM+ GL + +RV EAL + R M R     D  +L +++  CA
Sbjct: 320 AAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQM-RLENQPDVATLVTIVSGCA 378

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSA 291
            +G   E                G+ +H   I+ G    +  + NSLLD+Y K  +  +A
Sbjct: 379 DQGLLSE----------------GETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNA 422

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQ-----------------KYQSTKAIELLQRMKSC-- 332
            ++F  +P R ++SWN MI+GY +                 +  S     +L  + SC  
Sbjct: 423 GLLFMTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSI 482

Query: 333 -----------------GFEPDEVTSINMLVACVRS-GDIKTGREMFDSM-PSPSVSSWN 373
                            GF    V+++N L+    S GD      + + + P   + SWN
Sbjct: 483 PEELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWN 542

Query: 374 AMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
            ++    Q+E HK+A+++FR M     + PD  T+  +LS+C  + +L  GK +H   LK
Sbjct: 543 TVIVGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHCMILK 602

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                +  V + L+ +Y +      AE VF+ + + ++  WN MI+G + N+    A  F
Sbjct: 603 HLFASNLRVKNSLLTMYFRFGDTRSAELVFYSMGDTNLCSWNCMISGFAQNNKGWRALQF 662

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           +++M   E  P + S   ++ +C +L    QG+ +H  + +    N++F+ ++L++MYCK
Sbjct: 663 YQKMEDFE--PNEISVVGIICACTQLGGYRQGKSIHGHVFRSVLHNNVFISASLVDMYCK 720

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           CG +  A + F+    K+   WN +I  +  +G+G +++ L+  M  SG+K    TF+A+
Sbjct: 721 CGRLDIAVRVFEASAEKSIAGWNSLISAFGFHGHGMKSIDLFWKMHDSGMKATKSTFIAL 780

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L+ACSHSGLVD G + +  M    G+ P  +H+ C++D LGRAG   EA   ++ +P + 
Sbjct: 781 LSACSHSGLVDEGWKYYCLMSEKFGITPAPEHHVCIVDMLGRAGRLQEAHKFVESLPSQQ 840

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
              IW  LL++C   + +++ +  A+ L  L+P NS  Y   AN+Y+    W  +  VR 
Sbjct: 841 THGIWGALLNACSSRSELKMGESIAKHLLHLEPGNSGYYVTAANLYAYKDMWSGVAQVRS 900

Query: 733 LMSENCIVK 741
           ++ +  +VK
Sbjct: 901 VLQDKGLVK 909



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 142/535 (26%), Positives = 240/535 (44%), Gaps = 62/535 (11%)

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F E   P+ + + A +  L  + R  +A  +FR M R+    DS ++  +L   +R G  
Sbjct: 119 FREAVAPDVILWNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAG-- 176

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD-LHLSNSLLDMYAKNGDMDSAEVIFS 296
                         R   G ++H +  K    A  L   N+L+DMYAK G+  SAEV+F 
Sbjct: 177 -----------NLRR---GMELHGMAAKSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFH 222

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI-- 354
           ++P R   SWN +I+G      +  +    + M    F+PDEV+  ++L AC R  D+  
Sbjct: 223 SMPCRDTTSWNSVISGSIFNGLAEVSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFS 282

Query: 355 ------------------------------------KTGREMFDSMPSPSVSSWNAMLSS 378
                                               +  +++F S  + ++ SWNAM+  
Sbjct: 283 FGESVHSCAVKLGYEDTASCSVANSLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKG 342

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA-SHI 437
             Q+E   EA+ + R+M+    +PD  TL  I+S CA  G+L  G+ +H   ++      
Sbjct: 343 LVQNERVTEALAVLRQMRLEN-QPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLRE 401

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS-LNSLDIEAFMFFKQM 496
           +  + + L+ +Y KC     A  +F  +P  D++ WN+MI+G S    L  EA + FK +
Sbjct: 402 EPSMGNSLLDLYLKCDEPSNAGLLFMTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGL 461

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND-IFVGSALIEMYCKCGD 555
                  +  +   V+ SC+       G+ +H+   K G+ +  +   +ALI MY  CGD
Sbjct: 462 LSEGSSCSLATMLAVIPSCSIPEELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGD 521

Query: 556 IYGARQFFD-MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS-GVKPDDITFVAIL 613
              A    + ++   + ++WN +I G  QN    +A+ +++ M  S  + PD IT V++L
Sbjct: 522 PLAAFSLIERIIPVSDIISWNTVIVGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVL 581

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           +AC    L+ +G  I + M L H     L     ++    R G    AE++   M
Sbjct: 582 SACGDLNLLALGKSI-HCMILKHLFASNLRVKNSLLTMYFRFGDTRSAELVFYSM 635



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 219/457 (47%), Gaps = 89/457 (19%)

Query: 7   GKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ LH +++R GL  ++  + N L++LY KC+   +A  LF  MP +D+ SW        
Sbjct: 386 GETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLFMTMPRRDLISW-------- 437

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNG-LEEKALSVYNKMSNEGFVPTHITLA 124
                                  N +IS   R G L E+A  ++  + +EG   +  T+ 
Sbjct: 438 -----------------------NTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATML 474

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +V  + +   ++  G+  H   +K G     +   NAL+ +Y  CG    A  + E +  
Sbjct: 475 AVIPSCSIPEELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIP 534

Query: 184 PNE-VTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            ++ +++  ++ G  + +   +ALE+FR M    A++ DS+++ SVL  C       + +
Sbjct: 535 VSDIISWNTVIVGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACG------DLN 588

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           + A           G+ +HC+ +K  F ++L + NSLL MY + GD  SAE++F ++ + 
Sbjct: 589 LLAL----------GKSIHCMILKHLFASNLRVKNSLLTMYFRFGDTRSAELVFYSMGDT 638

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
           ++ SWN MI+G+ Q  +  +A++  Q+M+   FEP+E++ + ++ AC + G  + G+ + 
Sbjct: 639 NLCSWNCMISGFAQNNKGWRALQFYQKMED--FEPNEISVVGIICACTQLGGYRQGKSIH 696

Query: 361 ----------------------------------FDSMPSPSVSSWNAMLSSYSQSENHK 386
                                             F++    S++ WN+++S++    +  
Sbjct: 697 GHVFRSVLHNNVFISASLVDMYCKCGRLDIAVRVFEASAEKSIAGWNSLISAFGFHGHGM 756

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           ++I LF +M   G+K  ++T   +LS+C+  G+++ G
Sbjct: 757 KSIDLFWKMHDSGMKATKSTFIALLSACSHSGLVDEG 793



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 162/338 (47%), Gaps = 12/338 (3%)

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F    +P V  WNA + + + S  + +A  LFR M     + D TT+ ++LS  +  G L
Sbjct: 119 FREAVAPDVILWNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNL 178

Query: 421 ESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
             G ++H  + K+        A + L+ +Y+KC     AE VFH +P  D   WNS+I+G
Sbjct: 179 RRGMELHGMAAKSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISG 238

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ-GRQVHAQIEKDGY-- 536
              N L   +  +F++M  +   P + S ++VLS+C++L   F  G  VH+   K GY  
Sbjct: 239 SIFNGLAEVSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYED 298

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
                V ++L+  Y + G    A++ F     +N V+WN MI G  QN    EA+ + + 
Sbjct: 299 TASCSVANSLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQ 358

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV---EPILDHYTCMIDCLG 653
           M     +PD  T V I++ C+  GL+  G E  +   +  G+   EP + +   ++D   
Sbjct: 359 MRLEN-QPDVATLVTIVSGCADQGLLSEG-ETLHGYVIRKGLLREEPSMGNS--LLDLYL 414

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           +      A +L   MP + D + W  ++S    +  +R
Sbjct: 415 KCDEPSNAGLLFMTMP-RRDLISWNTMISGYSRYGPLR 451



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 181/410 (44%), Gaps = 55/410 (13%)

Query: 259 VHCLTIKLGFEADLHLSNSLLDM-------YAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
           +HC  +K G   D  +  SLL                 +A  +F       V+ WN  + 
Sbjct: 76  LHCAALKSGAVLDPPVRTSLLAAYARAGRGAGAGAGAGAALALFREAVAPDVILWNAAVG 135

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----------- 360
                 +   A  L +RM     E D  T + ML    R+G+++ G E+           
Sbjct: 136 ALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNLRRGMELHGMAAKSCLGA 195

Query: 361 -------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                                    F SMP    +SWN+++S    +   + +   FREM
Sbjct: 196 HCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSACYFREM 255

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILES-GKQVHAASLK-----TASHIDNYVASGLIGIY 449
                +PD  +L+ +LS+C+ +  L S G+ VH+ ++K     TAS     VA+ L+  Y
Sbjct: 256 SCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTAS---CSVANSLVTFY 312

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           S+    E A++VF      ++V WN+MI GL  N    EA    +QMR  E  P   +  
Sbjct: 313 SEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRL-ENQPDVATLV 371

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           T++S CA      +G  +H  + + G +  +  +G++L+++Y KC +   A   F  M  
Sbjct: 372 TIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLFMTMPR 431

Query: 569 KNTVTWNEMIHGYAQNG-YGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
           ++ ++WN MI GY++ G   +EA  ++K +++ G      T +A++ +CS
Sbjct: 432 RDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCS 481



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA--- 63
           GK +H H+ R+ L ++ F+   L+++Y KC     A  +F+    K I  WN+++SA   
Sbjct: 692 GKSIHGHVFRSVLHNNVFISASLVDMYCKCGRLDIAVRVFEASAEKSIAGWNSLISAFGF 751

Query: 64  ---QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVP 118
                KS DL   +K+ D   +    ++  L+SA   +GL ++    Y  MS + G  P
Sbjct: 752 HGHGMKSIDL--FWKMHDSGMKATKSTFIALLSACSHSGLVDEGWKYYCLMSEKFGITP 808


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 223/784 (28%), Positives = 381/784 (48%), Gaps = 86/784 (10%)

Query: 1   KKAHVAGKLLHAHILRN-GLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           ++A   G+ LH+ I +    F+  FL  +L+ +Y KC +                     
Sbjct: 93  RRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSL-------------------- 132

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
                   DD E   K+FDEMP+R   +WN +I A V NG    AL++Y  M  EG    
Sbjct: 133 --------DDAE---KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             +  ++ KA   L D+  G   H L++K+G     ++ NAL+S+YAK      A  +F+
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241

Query: 180 EMSEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
              E  + V + +++S  + + + +E LE+FR M     + +S ++ S L  C       
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC------- 294

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                    + FS    G+++H   +K     ++L++ N+L+ MY + G M  AE I   
Sbjct: 295 ---------DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +    VV+WN +I GY Q     +A+E    M + G + DEV+  +++ A  R  ++  G
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405

Query: 358 REM-----------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
            E+                                   F  M    + SW  +++ Y+Q+
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
           + H EA++LFR++  + ++ D   L  IL + + +  +   K++H   L+    +D  + 
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQ 524

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + L+ +Y KC+    A RVF  I   D+V W SMI+  +LN  + EA   F++M +  + 
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
               +   +LS+ A LS+  +GR++H  + + G+  +  +  A+++MY  CGD+  A+  
Sbjct: 585 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 644

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           FD +  K  + +  MI+ Y  +G G  AV L+  M    V PD I+F+A+L ACSH+GL+
Sbjct: 645 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 704

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D G      M+ ++ +EP  +HY C++D LGRA    EA   +  M  +    +W  LL+
Sbjct: 705 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLA 764

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           +CR H+   + + AA+ L  L+PKN     L++N+++  GRW+D+  VR  M  + + K 
Sbjct: 765 ACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKH 824

Query: 743 PAYS 746
           P  S
Sbjct: 825 PGCS 828



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 149/324 (45%), Gaps = 23/324 (7%)

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +PSP ++ ++ +L+            + F+ +            A +L  C     +  G
Sbjct: 52  VPSPKLACFDGVLT------------EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQG 99

Query: 424 KQVHAASLKTASHID-NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           +Q+H+   KT    + +++A  L+ +Y KC   + AE+VF  +P+     WN+MI     
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           N     A   +  MR   +     SF  +L +CAKL     G ++H+ + K GY +  F+
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
            +AL+ MY K  D+  AR+ FD    K + V WN ++  Y+ +G   E + L+++M  +G
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSM--QLDHGVEPILDHYTC--MIDCLGRAGH 657
             P+  T V+ LTAC       +G EI  S+     H  E     Y C  +I    R G 
Sbjct: 280 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL----YVCNALIAMYTRCGK 335

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLL 681
             +AE ++ +M    D V W  L+
Sbjct: 336 MPQAERILRQMN-NADVVTWNSLI 358


>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 784

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 202/711 (28%), Positives = 362/711 (50%), Gaps = 54/711 (7%)

Query: 72  FAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
           F+  LF  +  +++  WN++I +   NG  ++A   Y +M     +P   T+  V     
Sbjct: 90  FSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCA 149

Query: 132 ALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
            L+   HG   HGL  K+GL   N  + ++ + +Y+KCG  + A  +F E++  + VT+T
Sbjct: 150 ELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWT 209

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           A++ G  + +     L+    M R   + +  ++ S    C      V+ D         
Sbjct: 210 ALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQAC------VDLDAL------- 256

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
              V G+ +H L +K GF     + +++L MY++ G  + A   F  L ++ ++SW  +I
Sbjct: 257 ---VEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSII 313

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA---------------------CV 349
           A + +    ++ + L   M++    PDE+    ML+                      C 
Sbjct: 314 AVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCA 373

Query: 350 RSG--------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
            SG               + T  ++F S    S   W+ M+  YS     ++ I   REM
Sbjct: 374 LSGITHNALLSMYCKFGHLGTANKIFHSFHKSS-EDWSTMILGYSNMGQKEKCISFLREM 432

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
              G +PD  +L  ++SSC+ +G +  G+ +H  ++K +   +  VA+ L+ +Y K    
Sbjct: 433 LLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHV 492

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
               R+FHR  + D++ WN++I+    + +  EA + F +M + ++YP + +   VLS+C
Sbjct: 493 TATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSAC 552

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           A L+S  +G ++H  I+++G+ ++I + +ALI+MY KCG++  +R+ F+    ++ + WN
Sbjct: 553 AHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWN 612

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI  Y  +G+ + A+ +++ M  S +KP+  TF+++L+AC+H+G V  G  +F+ MQ  
Sbjct: 613 VMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQ-K 671

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           +G+EP L HY  +ID LGR+G    AE L+  MP   D  +W  LLS+C++H    +  R
Sbjct: 672 YGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVR 731

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            A      DPKN   Y +L+++YS LGRWD++  VR++M +  + K   +S
Sbjct: 732 LARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWS 782



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 146/576 (25%), Positives = 255/576 (44%), Gaps = 53/576 (9%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   +E A  +F E+  ++VV+W  LI   V+N    + L    +M   G  P + T+ S
Sbjct: 186 KCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGS 245

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
            F+A   L  +  G+  HGL +K G      V + +LS+Y++CG  + A   F ++ + +
Sbjct: 246 GFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKD 305

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++T++++  +K   + E L +F  M    +  D + +S     C   G       F  
Sbjct: 306 LISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVIS-----CMLMG-------FGN 353

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           SD  F     G+  H   +K          N+LL MY K G + +A  IF +   +S   
Sbjct: 354 SDRIFE----GKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSF-HKSSED 408

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------- 358
           W+ MI GY    Q  K I  L+ M   G EPD  + ++++ +C + G I  GR       
Sbjct: 409 WSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAI 468

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +F       V SWN ++SSY QS    EAI 
Sbjct: 469 KNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAII 528

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF +M    V P++ T  I+LS+CA +  L+ G+++H    +     +  + + LI +Y+
Sbjct: 529 LFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYA 588

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   E + ++F+   E D++ WN MI+   ++     A   F+ M ++ + P   +F +
Sbjct: 589 KCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLS 648

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF-FDMMHGK 569
           +LS+C       +GR +  +++K G    +   +++I++  + G +  A      M    
Sbjct: 649 LLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITP 708

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           +   W  ++     +   +  VRL +  I S  K D
Sbjct: 709 DGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKND 744



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/518 (22%), Positives = 215/518 (41%), Gaps = 84/518 (16%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V GK LH   L+NG      + + ++ +YS+C +   A   F K+  KD+ SW +I++
Sbjct: 255 ALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIA 314

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              K                                GL  + L ++ +M     +P  I 
Sbjct: 315 VHSKF-------------------------------GLMSECLHLFWEMQASEIIPDEIV 343

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           ++ +         +  G+  H  ++K     +    NALLS+Y K G    A  +F    
Sbjct: 344 ISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFH 403

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           + +E  ++ M+ G +   +  + +   R M+      D  SL SV+  C++ G       
Sbjct: 404 KSSE-DWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVG------- 455

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                   + N+ G+ +HC  IK     ++ ++NSL+DMY K+G + +   IF    +R 
Sbjct: 456 --------AINI-GRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRD 506

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------- 348
           V+SWN +I+ Y Q     +AI L  +M      P++VT I +L AC              
Sbjct: 507 VISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQ 566

Query: 349 ---------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                 + G+++T R++F+S     V  WN M+S+Y    + + 
Sbjct: 567 YIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVES 626

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+++F+ M+   +KP+  T   +LS+C   G +  G+ +     K          + +I 
Sbjct: 627 AMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIID 686

Query: 448 IYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS 484
           +  +    E AE +   +P   D   W S+++   +++
Sbjct: 687 LLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHN 724



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 1/198 (0%)

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
            +S  Q H+  + T +  + + A+ L+  Y+  ++   +  +F  I   DI  WNS+I  
Sbjct: 53  FQSLLQFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQS 112

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG-YVN 538
              N     AF F+ QMR +   P QF+   V+S+CA+L     G  +H    K G +V 
Sbjct: 113 HFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVG 172

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           +  +GS+ I MY KCG +  A   F  +  K+ VTW  +I GY QN      ++   +M 
Sbjct: 173 NSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMH 232

Query: 599 ASGVKPDDITFVAILTAC 616
             G  P+  T  +   AC
Sbjct: 233 RIGGTPNYKTIGSGFQAC 250


>gi|223635620|sp|O49680.2|PP324_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19220, mitochondrial; Flags: Precursor
          Length = 951

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 220/786 (27%), Positives = 392/786 (49%), Gaps = 100/786 (12%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           +LH   +  GL  D+ LCN L+ LY+K  N                     + SA+C   
Sbjct: 209 MLHCLAIETGLVGDSSLCNALMNLYAKGEN---------------------LSSAEC--- 244

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
                  +F  M  R++VSWN +++  + NG   K+L  +  M+  G     +T + V  
Sbjct: 245 -------VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297

Query: 129 ASTALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           A +++ ++  G   HGLVIK G   + ++ V N+++S+Y+KCG T+ A  VFEE+   + 
Sbjct: 298 ACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDV 357

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           ++  A+++G A      EA  +   M     +  D  ++ S+  +C              
Sbjct: 358 ISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICG------------- 404

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEAD-LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            D  FSR   G+ VH  T+++  ++  L + NS++DMY K G    AE++F     R +V
Sbjct: 405 -DLSFSR--EGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLV 461

Query: 305 SWNVMIAGYGQKYQSTKAIELLQR------------------MKSC-------------- 332
           SWN MI+ + Q   + KA  L +                   + SC              
Sbjct: 462 SWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHC 521

Query: 333 -----GFEPDEVTS---INMLVACVRSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSE 383
                GF  + +++   INM + C    D+ +     ++M  +  ++SWN+++S  + S 
Sbjct: 522 WLQKLGFGDNMLSANSVINMYIGCR---DLTSAFLRLETMSETRDLTSWNSVISGCASSG 578

Query: 384 NHKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
           +H E+++ F+ M   G ++ D  TL   +S+   +G++  G+  H  ++K+   +D  + 
Sbjct: 579 HHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQ 638

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + LI +Y +C+  E A +VF  I + ++  WN +I+ LS N    E F  F+ ++   + 
Sbjct: 639 NTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LE 695

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P + +F  +LS+  +L S+  G Q H  + + G+  + FV +AL++MY  CG +    + 
Sbjct: 696 PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKV 755

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGL 621
           F      +   WN +I  +  +G G++A+ L+K++ + S ++P+  +F+++L+ACSHSG 
Sbjct: 756 FRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGF 815

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           +D G+  +  M+   GV+P+ +H   ++D LGRAG   EA   I  +       +W  LL
Sbjct: 816 IDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALL 875

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           S+C  H + +L K  AE LF ++P N++ Y  LAN Y  LG W++   +R+++ +N + K
Sbjct: 876 SACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKK 935

Query: 742 DPAYSL 747
            P YS+
Sbjct: 936 LPGYSV 941



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 162/625 (25%), Positives = 295/625 (47%), Gaps = 74/625 (11%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D+ + + +L+   ++ +L  +  LFDE+ E++V+ WN++I+AL +NG    A+ ++ +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRC---HGLVIKIGLDKNIYVANALLSLYAKC 168
            ++G         ++  A++AL  +   R+C   H L I+ GL  +  + NAL++LYAK 
Sbjct: 180 IHKG---NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKG 236

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
                A  VF  M   + V++  +M+         ++L+ F+ M       D+V+ S V+
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS--NSLLDMYAKNG 286
             C+     +E                G+ +H L IK G+  + H+S  NS++ MY+K G
Sbjct: 297 SACS----SIEELTL------------GESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC-GFEPDEVTSINML 345
           D ++AE +F  L  R V+S N ++ G+       +A  +L +M+S    +PD  T +++ 
Sbjct: 341 DTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400

Query: 346 VACVRSGDIKTGRE---------------------------------------MFDSMPS 366
             C   GD+   RE                                       +F +   
Sbjct: 401 SIC---GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTH 457

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREM--QFRGVKPDRTTLAIILSSCAAMGILESGK 424
             + SWN+M+S++SQ+    +A  LF+E+  ++   K   +T+  IL+SC +   L  GK
Sbjct: 458 RDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGK 517

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLN 483
            VH    K     +   A+ +I +Y  C+    A      + E  D+  WNS+I+G + +
Sbjct: 518 SVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASS 577

Query: 484 SLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
              +E+   F+ M R+ ++     +    +S+   L    QGR  H    K     D  +
Sbjct: 578 GHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQL 637

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            + LI MY +C DI  A + F ++   N  +WN +I   +QN  G E  +L++++    +
Sbjct: 638 QNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KL 694

Query: 603 KPDDITFVAILTACSHSGLVDVGVE 627
           +P++ITFV +L+A +  G    G++
Sbjct: 695 EPNEITFVGLLSASTQLGSTSYGMQ 719



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 175/765 (22%), Positives = 320/765 (41%), Gaps = 140/765 (18%)

Query: 40  HSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNG 99
           + + + F K  HK  ++ + +      S      + LFDE+PER                
Sbjct: 41  YCSNYYFSKRKHKRHFTSSVL------SPVTPIVHNLFDELPERE--------------- 79

Query: 100 LEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVAN 159
                        N     + + L  V ++     + E  R  H   +K GL +++  ++
Sbjct: 80  -------------NRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSS 126

Query: 160 ALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
            LL+ Y + G    +  +F+E+ E + + + +M++ L +  R + A+ +F  MI K    
Sbjct: 127 KLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEF 186

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           DS +L               +        K S       +HCL I+ G   D  L N+L+
Sbjct: 187 DSTTLLLA----------ASALSSLHLSRKCS------MLHCLAIETGLVGDSSLCNALM 230

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
           ++YAK  ++ SAE +F+++  R +VSWN ++          K+++  + M   G E D V
Sbjct: 231 NLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTV 290

Query: 340 TSINMLVAC-------------------------------------VRSGDIKTGREMFD 362
           T   ++ AC                                      + GD +    +F+
Sbjct: 291 TFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFE 350

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLAIILSSCAAMGILE 421
            +    V S NA+L+ ++ +   +EA  +  +MQ    ++PD  T+  I S C  +    
Sbjct: 351 ELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSR 410

Query: 422 SGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
            G+ VH  +++         V + +I +Y KC     AE +F      D+V WNSMI+  
Sbjct: 411 EGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAF 470

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATV---LSSCAKLSSSFQGRQVHAQIEKDGYV 537
           S N    +A   FK++  +E   ++FS +TV   L+SC    S   G+ VH  ++K G+ 
Sbjct: 471 SQNGFTHKAKNLFKEV-VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFG 529

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
           +++   +++I MY  C D+  A    + M   ++  +WN +I G A +G+  E++R ++ 
Sbjct: 530 DNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQA 589

Query: 597 MIASG-VKPDDITFVAILTACSHSGLV---------------DVGVEIFNSMQLDHG--- 637
           M   G ++ D IT +  ++A  + GLV               ++  ++ N++   +G   
Sbjct: 590 MSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCK 649

Query: 638 ------------VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS--- 682
                        +P L  + C+I  L +     E   L   +  + + + +  LLS   
Sbjct: 650 DIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSAST 709

Query: 683 -----SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
                S  + A+  L +R     F+ +P  SA    L ++YSS G
Sbjct: 710 QLGSTSYGMQAHCHLIRRG----FQANPFVSAA---LVDMYSSCG 747



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 36/248 (14%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G+  H   +++    DT L N LI +Y +C +  SA  +F  +   ++ SWN +    
Sbjct: 617 LQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCV---- 672

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                      ISAL +N    +   ++  +  E   P  IT  
Sbjct: 673 ---------------------------ISALSQNKAGREVFQLFRNLKLE---PNEITFV 702

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            +  AST L    +G + H  +I+ G   N +V+ AL+ +Y+ CG  +  + VF      
Sbjct: 703 GLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVN 762

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFR-LMIRKAVSIDSVSLSSVLGVCAREGCGVES-DV 242
           +   + +++S         +A+E+F+ L     +  +  S  S+L  C+  G   E    
Sbjct: 763 SISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSY 822

Query: 243 FAQSDNKF 250
           + Q + KF
Sbjct: 823 YKQMEEKF 830



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 11/191 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G   H H++R G   + F+   L+++YS C    +   +F       I +WN+++SA   
Sbjct: 717 GMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGF 776

Query: 67  SDDLEFAYKLFDEMP-----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
               E A +LF E+      E N  S+ +L+SA   +G  ++ LS Y +M  E F    +
Sbjct: 777 HGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQM-EEKFGVKPV 835

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE-- 179
           T   V+     L      R  +  +  IG  +   V  ALLS     G TK    V E  
Sbjct: 836 TEHRVWIVDM-LGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVL 894

Query: 180 -EMSEPNEVTF 189
            EM EP+  ++
Sbjct: 895 FEM-EPDNASY 904


>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
          Length = 526

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 195/576 (33%), Positives = 305/576 (52%), Gaps = 62/576 (10%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH------AVPVFEEMSEPNEVTFTAMM 193
           R  H  +IK GL    Y  + L+     C  + H      A+ VFE + EPN + +  M 
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEF---CVLSPHFDGLPYAISVFETIQEPNLLIWNTMF 60

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            G A +   V AL ++  MI   +  +  +   +L  CA+      S  F +        
Sbjct: 61  RGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK------SKAFRE-------- 106

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             GQQ+H   +KLG++ DL++  SL+ MY +NG ++ A  +F     R VVS+  +I GY
Sbjct: 107 --GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGY 164

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
             +                                   G I+  +++FD +P   V SWN
Sbjct: 165 ASR-----------------------------------GYIENAQKLFDEIPVKDVVSWN 189

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           AM+S Y+++ N+KEA++LF++M    V+PD +T+  ++S+CA  G +E G+QVH      
Sbjct: 190 AMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDH 249

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               +  + + LI +YSKC   E A  +F  +   D++ WN++I G +  +L  EA + F
Sbjct: 250 GFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 309

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK--DGYVNDIFVGSALIEMYC 551
           ++M ++   P   +  ++L +CA L +   GR +H  I K   G  N   + ++LI+MY 
Sbjct: 310 QEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYA 369

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCGDI  A+Q FD M  ++  +WN MI G+A +G  + A  L+  M  +G+ PDDITFV 
Sbjct: 370 KCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVG 429

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +L+ACSHSG++D+G  IF SM  D+ + P L+HY CMID LG  G F EA+ +I  MP +
Sbjct: 430 LLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPME 489

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
            D VIW  LL +C++H NV L +  A+ L +++P+ 
Sbjct: 490 PDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPET 525



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 216/430 (50%), Gaps = 26/430 (6%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H H+L+ G   D ++   LI +Y +      A+ +FD+  H+D+ S+ A++
Sbjct: 102 KAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALI 161

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   +E A KLFDE+P ++VVSWN +IS     G  ++AL ++  M      P   
Sbjct: 162 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 221

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ +V  A      +E GR+ H  +   G   N+ + NAL+ LY+KCG  + A  +FE +
Sbjct: 222 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGL 281

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S  + +++  ++ G    +   EAL +F+ M+R   S + V++ S+L  CA  G     D
Sbjct: 282 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA---ID 338

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKL--GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           +             G+ +H    K   G      L  SL+DMYAK GD+++A+ +F ++ 
Sbjct: 339 I-------------GRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSML 385

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            RS+ SWN MI G+    ++  A +L  +M+  G +PD++T + +L AC  SG +  GR 
Sbjct: 386 TRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRH 445

Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +F SM      +P +  +  M+         KEA ++ R M    ++PD      +L +C
Sbjct: 446 IFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMP---MEPDGVIWCSLLKAC 502

Query: 415 AAMGILESGK 424
                +E G+
Sbjct: 503 KMHNNVELGE 512



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 135/542 (24%), Positives = 244/542 (45%), Gaps = 118/542 (21%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           +++HA +++ GL +  +  ++LIE                            +LS     
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEF--------------------------CVLSPHF-- 35

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D L +A  +F+ + E N++ WN +      +     AL +Y  M + G +P   T   + 
Sbjct: 36  DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLL 95

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL----------------------- 164
           K+         G++ HG V+K+G D ++YV  +L+S+                       
Sbjct: 96  KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 155

Query: 165 --------YAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
                   YA  G+ ++A  +F+E+   + V++ AM+SG A+T    EALE+F+ M++  
Sbjct: 156 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 215

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  D  ++ +V+  CA+ G  +E                G+QVH      GF ++L + N
Sbjct: 216 VRPDESTMVTVVSACAQSG-SIEL---------------GRQVHLWIDDHGFGSNLKIVN 259

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D+Y+K G++++A  +F  L  + V+SWN +I GY       +A+ L Q M   G  P
Sbjct: 260 ALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESP 319

Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
           ++VT +++L AC                                      + GDI+  ++
Sbjct: 320 NDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQ 379

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +FDSM + S+SSWNAM+  ++       A  LF +M+  G+ PD  T   +LS+C+  G+
Sbjct: 380 VFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGM 439

Query: 420 LESGKQVH---AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNS 475
           L+ G+ +    +   K    +++Y    +I +   C   + A+ +   +P E D V W S
Sbjct: 440 LDLGRHIFRSMSQDYKITPKLEHY--GCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCS 497

Query: 476 MI 477
           ++
Sbjct: 498 LL 499


>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 621

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 180/492 (36%), Positives = 278/492 (56%), Gaps = 36/492 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G +VH  T   GF   + +SN +LDMY K   + +A+ +F  + ER + SWN+MI+GY  
Sbjct: 108 GMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYA- 166

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                             ++G ++  R++FD M      SW AM
Sbjct: 167 ----------------------------------KAGRLQEARKLFDQMTERDNFSWTAM 192

Query: 376 LSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
            S Y + + H+EA++LFR MQ     K ++ T++  L++ AA+  L  GK++H   L+  
Sbjct: 193 TSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIG 252

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             +D  V S L  +Y KC     A  +F +  + D+V W +MI          E F  F 
Sbjct: 253 LDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFS 312

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
            + ++ ++P +F+F+ VL++CA  ++   G+QVH  + + G+    F  S L+ MY KCG
Sbjct: 313 DLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCG 372

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
           +I  AR+ F+ M   + V+W  +I GYAQNG  DEA++ ++ ++ SG +PD ITFV +L+
Sbjct: 373 NIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLS 432

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           AC+H+GLVD G+E F+S++  HG+    DHY C+ID L R+G   EAE +ID+MP + D 
Sbjct: 433 ACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDK 492

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
            +W  LL  CR+H N++LAKRAAE LF ++P+N A Y+ LANIY++ G W  +  VR++M
Sbjct: 493 FLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVM 552

Query: 735 SENCIVKDPAYS 746
               +VK P  S
Sbjct: 553 DARGVVKKPGLS 564



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 235/457 (51%), Gaps = 37/457 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HAH   +G      + NR++++Y KCN+  +A+ LFD+M  +D+ SWN ++S   K
Sbjct: 108 GMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAK 167

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITLAS 125
           +  L+ A KLFD+M ER+  SW  + S  VR+   E+AL ++  M  +E F     T++S
Sbjct: 168 AGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSS 227

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              AS A+  +  G+  HG +++IGLD +  V +AL  +Y KCG    A  +F++  + +
Sbjct: 228 ALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRD 287

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++TAM+    K  R  E   +F  +++  +  +  + S VL  CA        D  A+
Sbjct: 288 VVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACA--------DHAAE 339

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+QVH    ++GF+     +++L+ MY K G++ +A  +F+ +P   +VS
Sbjct: 340 E--------LGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVS 391

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  +I+GY Q  Q  +A++  + +   G +PD +T + +L AC  +G +  G E FDS+ 
Sbjct: 392 WTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIK 451

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                + +   +  ++   S+S   +EA  +  +M    ++PD+   A +L  C   G L
Sbjct: 452 EKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMP---IEPDKFLWASLLGGCRIHGNL 508

Query: 421 ESGKQV----------HAASLKTASHIDNYVASGLIG 447
           +  K+           + A+  T ++I  Y  +GL G
Sbjct: 509 KLAKRAAEALFEIEPENPATYTTLANI--YATAGLWG 543



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 195/425 (45%), Gaps = 65/425 (15%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P+  T +++ +    L  ++ G + H      G    + ++N +L +Y KC    +A  +
Sbjct: 87  PSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRL 146

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+EM+E +  ++  M+SG AK  R+ EA ++F  M  +    D+ S +++     R    
Sbjct: 147 FDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTER----DNFSWTAMTSGYVRHDQH 202

Query: 238 VES-DVFAQSD-------NKFS-----------RNVH-GQQVHCLTIKLGFEADLHLSNS 277
            E+ ++F           NKF+           +++H G+++H   +++G + D  + ++
Sbjct: 203 EEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSA 262

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L DMY K G +  A  IF    +R VVSW  MI  Y ++ +  +   L   +   G  P+
Sbjct: 263 LSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPN 322

Query: 338 EVTSINMLVAC-----------------------------------VRSGDIKTGREMFD 362
           E T   +L AC                                    + G+IK  R +F+
Sbjct: 323 EFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFN 382

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            MP P + SW +++S Y+Q+    EA++ F  +   G +PD  T   +LS+C   G+++ 
Sbjct: 383 GMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDK 442

Query: 423 GKQVHAASLKTA---SHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
           G + +  S+K     +H  ++ A  LI + S+  R + AE +  ++P E D   W S++ 
Sbjct: 443 GLE-YFDSIKEKHGLTHTADHYAC-LIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLG 500

Query: 479 GLSLN 483
           G  ++
Sbjct: 501 GCRIH 505



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 73/131 (55%), Gaps = 4/131 (3%)

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P+  +++T+L  C +L +  +G +VHA  +  G+V  + + + +++MY KC  +  A++ 
Sbjct: 87  PSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRL 146

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           FD M  ++  +WN MI GYA+ G   EA +L+  M     + D+ ++ A+ +        
Sbjct: 147 FDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQM----TERDNFSWTAMTSGYVRHDQH 202

Query: 623 DVGVEIFNSMQ 633
           +  +E+F +MQ
Sbjct: 203 EEALELFRAMQ 213


>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 224/722 (31%), Positives = 361/722 (50%), Gaps = 58/722 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  HA I+ +G   D FL N L+ LYSKC +                            
Sbjct: 103 GKCTHARIVVSGTAGDHFLTNNLLTLYSKCGS---------------------------- 134

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALV-----RNGLEEKALSVYNKMSNEGFVPTHI 121
              L FA ++FD  PER++V+WN ++ A        +G  ++ L ++  +       T +
Sbjct: 135 ---LSFACQVFDTTPERDLVTWNAILGAYASSVDSNDGNAQEGLHLFRLLRESLGSTTRM 191

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           TLA V K  +    +   +  HG  IKIGL  +++V   L+++Y+KCG    A  +F+ M
Sbjct: 192 TLAPVLKLCSNSXCLWAAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGM 251

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E + V +  M+ G  +     EA ++F    R  +  D  S+  +L           + 
Sbjct: 252 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLXPDEFSVQLIL-----------NG 300

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGF---EADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
           VF  + ++     H  QV     KL       D+   N  L  Y   GD   A   F N+
Sbjct: 301 VFEVNXDE--GKWHADQVQAYXXKLSLSDDNXDVFCWNKKLSEYLWAGDNWGAIECFVNM 358

Query: 299 PERSV----VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
              +V    V+   ++A        ++ I +   +K+     D   +  ++    RSG +
Sbjct: 359 NGLNVXYDXVTLLEVLAAVADGLNISRQIHV-HALKTSNI-ADSFVATALIDVYSRSGKM 416

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +    +F +     ++ WNAM+  Y  S +  +A+ LF  +   G K D+ TLA    +C
Sbjct: 417 EEAELLFQNKDDLDLACWNAMMFGYIISNDGNKALGLFSLINRSGEKSDQITLATAAKAC 476

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
             + +L+ GKQ+HA  +K     D YV SG++ +Y KC     A  VF+ I   D V W 
Sbjct: 477 GCLVLLDZGKQIHAHVIKAGFXSDLYVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWT 536

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           SMI+G   N  + +A   + QMRQ+ + P +++FAT++ + + +++  QGRQ+HA + K 
Sbjct: 537 SMISGCVDNGNEDQALRIYHQMRQSGVMPDEYTFATLIKASSYVTALEQGRQLHANVIKL 596

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
             V+D FVG++L++MY KCG+I    + F  M+ +N V WN M+ G AQ+G  +EAV L+
Sbjct: 597 DCVSDPFVGTSLVDMYAKCGNIEDXYRLFKKMNVRNIVLWNAMLVGIAQHGNAEEAVNLF 656

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           K M + G++PD ++F+ IL+ACS +GL     E F+SM  D G+EP ++HY+C++D LG 
Sbjct: 657 KSMKSHGIEPDRVSFIGILSACSLAGLTSEAYEYFHSMPNDCGIEPEIEHYSCLVDALGX 716

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           AG   E + +I+ MP K    +   LL +CR+  +V + KR A  LF L+P +SA Y   
Sbjct: 717 AGLVQEXDKVIETMPFKASASMNRALLGACRIQGDVEIGKRVAARLFALEPFDSAAYGFF 776

Query: 715 AN 716
           ++
Sbjct: 777 SH 778



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 211/494 (42%), Gaps = 98/494 (19%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           A K +H + ++ GL  D F+   L+ +YSKC     A+ LFD M  +D+  WN +L    
Sbjct: 208 AAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLKGYV 267

Query: 66  KSDDLEFAYKLFDEM------PER------------------------------------ 83
           +    + A++LF E       P+                                     
Sbjct: 268 QLGLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFEVNXDEGKWHADQVQAYXXKLSLSD 327

Query: 84  ---NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
              +V  WN  +S  +  G    A+  +  M+        +TL  V  A    L++   R
Sbjct: 328 DNXDVFCWNKKLSEYLWAGDNWGAIECFVNMNGLNVXYDXVTLLEVLAAVADGLNIS--R 385

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           + H   +K     + +VA AL+ +Y++ G  + A  +F+   + +   + AMM G   ++
Sbjct: 386 QIHVHALKTSNIADSFVATALIDVYSRSGKMEEAELLFQNKDDLDLACWNAMMFGYIISN 445

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              +AL +F L+ R     D ++L++    C   GC V  D              G+Q+H
Sbjct: 446 DGNKALGLFSLINRSGEKSDQITLATAAKAC---GCLVLLD-------------ZGKQIH 489

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
              IK GF +DL++++ +LDMY K GDM +A ++F+ +     V+W  MI+G        
Sbjct: 490 AHVIKAGFXSDLYVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNED 549

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVA---------------------CV---------- 349
           +A+ +  +M+  G  PDE T   ++ A                     CV          
Sbjct: 550 QALRIYHQMRQSGVMPDEYTFATLIKASSYVTALEQGRQLHANVIKLDCVSDPFVGTSLV 609

Query: 350 ----RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
               + G+I+    +F  M   ++  WNAML   +Q  N +EA+ LF+ M+  G++PDR 
Sbjct: 610 DMYAKCGNIEDXYRLFKKMNVRNIVLWNAMLVGIAQHGNAEEAVNLFKSMKSHGIEPDRV 669

Query: 406 TLAIILSSCAAMGI 419
           +   ILS+C+  G+
Sbjct: 670 SFIGILSACSLAGL 683


>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 210/651 (32%), Positives = 332/651 (50%), Gaps = 114/651 (17%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV----------- 202
           ++ V+N ++S Y + G    A  +F+EM E NEV+++A++SGL K  RV           
Sbjct: 86  DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145

Query: 203 --------------------VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
                                EAL++F  ++   V  + V+ +SV+  C   G       
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELG------- 198

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
               D     ++ G     L +K GFE  L +SNSL+ +  + G++D A  +F  + +R 
Sbjct: 199 ----DFGLGMSILG-----LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRD 249

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           VVSW  ++  Y                                   V +GD++  R +FD
Sbjct: 250 VVSWTAILDAY-----------------------------------VETGDLREARRIFD 274

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            MP  +  SW+AM++ YSQS   +EA+KLF +M   G KP+ +  A  LS+ A++  L +
Sbjct: 275 EMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSA 334

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           G  +H    K     D ++ S LI +Y KC + +    VF  I E ++VCWNSM+ G S+
Sbjct: 335 GINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSI 394

Query: 483 NSL---------------DIEAFMFFKQMRQNEM----------------YPTQFSFATV 511
           N                 D+          +NE                  P + +F++V
Sbjct: 395 NGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSV 454

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L +CA ++S  +G  VH +I K G   DIFVG+AL +MY KCGDI  ++Q F+ M  KN 
Sbjct: 455 LCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNE 514

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           ++W  MI G A++G+  E++ L+++M   S V P+++  +++L ACSH GLVD G+  FN
Sbjct: 515 ISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFN 574

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM+  +G++P   HYTC++D L R+G  +EAE  I  +P + +   W  LLS C+ + + 
Sbjct: 575 SMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDE 634

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           ++A+R A++L++L   NSA Y LL+NIY+S GRW D+  +R+LM E  + K
Sbjct: 635 KIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKK 685



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 162/654 (24%), Positives = 300/654 (45%), Gaps = 126/654 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKC------------------------------ 36
           G +LHAH+++ G     ++  +L+ LY  C                              
Sbjct: 40  GNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQ 99

Query: 37  -NNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISAL 95
             N   A+ LFD+MP ++  SW+A++S   K   +E +   F+  P +NVVSW   IS  
Sbjct: 100 WGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGF 159

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNI 155
           VRNGL  +AL ++ ++   G  P  +T  SV +A   L D   G    GLV+K G +  +
Sbjct: 160 VRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYL 219

Query: 156 YVANALLSLYAKCG-------------------WT------------KHAVPVFEEMSEP 184
            V+N+L++L  + G                   WT            + A  +F+EM E 
Sbjct: 220 SVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPER 279

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA----VSIDSVSLSSVLGVCAREGCGVES 240
           NE++++AM++  +++    EAL++F  M+++     +S  + +LS++  + A    G+  
Sbjct: 280 NEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSA-GI-- 336

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                       N+HG        K+G + D+ + +SL+D+Y K G  D   ++F  + E
Sbjct: 337 ------------NIHGH-----VTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE 379

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           ++VV WN M+ GY                           SIN        G ++   E+
Sbjct: 380 KNVVCWNSMVGGY---------------------------SIN--------GRLEETEEL 404

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F+ +P  +  SW  +++ Y ++E  ++ +++F  +   G  P+++T + +L +CA++  L
Sbjct: 405 FELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASL 464

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
           + G  VH   +K     D +V + L  +Y+KC     +++VF R+PE + + W  MI GL
Sbjct: 465 DKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGL 524

Query: 481 SLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK-DGYVN 538
           + +   +E+ + F++M R +E+ P +    +VL +C+      +G      +EK  G   
Sbjct: 525 AESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKP 584

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAV 591
                + ++++  + G +Y A +F   +  +     W  ++ G  +  Y DE +
Sbjct: 585 KGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKK--YKDEKI 636



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 213/498 (42%), Gaps = 71/498 (14%)

Query: 249 KFSRN---VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           KFS       G  +H   IK GF +  +++  LL +Y         + I        +V 
Sbjct: 30  KFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVV 89

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
            N MI+ Y Q     +A  L   M     E +EV+   ++   ++ G ++     F+  P
Sbjct: 90  SNCMISAYVQWGNLVQARLLFDEMP----ERNEVSWSALISGLMKYGRVEESMWYFERNP 145

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
             +V SW A +S + ++  + EA+KLF  +   GV+P+  T   ++ +C  +G    G  
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMS 205

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR--------------------- 464
           +    +K        V++ LI +  +    +LA RVF R                     
Sbjct: 206 ILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGD 265

Query: 465 ----------IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
                     +PE + + W++MIA  S +    EA   F +M Q    P    FA  LS+
Sbjct: 266 LREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSA 325

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
            A L +   G  +H  + K G   D+F+GS+LI++YCKCG     R  FD++  KN V W
Sbjct: 326 LASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCW 385

Query: 575 NEMIHGYAQNG-------------------YG------------DEAVRLYKDMIASGVK 603
           N M+ GY+ NG                   +G            ++ + ++  ++ SG  
Sbjct: 386 NSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQT 445

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           P+  TF ++L AC+    +D G+ +   + +  G++  +   T + D   + G    ++ 
Sbjct: 446 PNKSTFSSVLCACASIASLDKGMNVHGKI-IKLGIQYDIFVGTALTDMYAKCGDIGSSKQ 504

Query: 664 LIDEMPCKDDPVIWEVLL 681
           + + MP K++ + W V++
Sbjct: 505 VFERMPEKNE-ISWTVMI 521



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 199/414 (48%), Gaps = 41/414 (9%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A  AG  +H H+ + G+  D F+ + LI+LY KC      + +FD +  K++  WN+++
Sbjct: 330 RALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMV 389

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                +  LE   +LF+ +PE+N VSW  +I+  + N   EK L V+N +   G  P   
Sbjct: 390 GGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKS 449

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T +SV  A  ++  ++ G   HG +IK+G+  +I+V  AL  +YAKCG    +  VFE M
Sbjct: 450 TFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERM 509

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVES 240
            E NE+++T M+ GLA++   VE+L +F  M R + V+ + + L SVL  C+   CG+  
Sbjct: 510 PEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSH--CGLVD 567

Query: 241 D---VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                F   +  +     G+   C                ++D+ +++G +  AE     
Sbjct: 568 KGLWYFNSMEKVYGIKPKGKHYTC----------------VVDLLSRSGRLYEAEEFIRT 611

Query: 298 LP-ERSVVSWNVMIAGYGQKYQSTKAIEL-------LQRMKSCGFEPDEVTSINMLVACV 349
           +P +    +W  +++G  +KY+  K  E        L    S G+    V   N+  +  
Sbjct: 612 IPFQPEANAWAALLSGC-KKYKDEKIAERTAKKLWQLAENNSAGY----VLLSNIYASAG 666

Query: 350 RSGDIKTGREMF--DSMPSPSVSSW----NAMLSSYSQSENHKEAIKLFREMQF 397
           R  D+   R++     +      SW    N + S YS+  +H ++ +++  +Q 
Sbjct: 667 RWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQL 720



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/365 (20%), Positives = 144/365 (39%), Gaps = 95/365 (26%)

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR----------- 454
           T   +L   +  G++  G  +HA  +KT      Y+A  L+ +Y  C++           
Sbjct: 23  TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82

Query: 455 -------------------NELAER-VFHRIPELDIVCWNSMIAGL-------------- 480
                              N +  R +F  +PE + V W+++I+GL              
Sbjct: 83  DGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFE 142

Query: 481 -----------------SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
                              N L+ EA   F ++ ++ + P   +F +V+ +C +L     
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202

Query: 524 GRQVHAQIEKDGYVN-------------------------------DIFVGSALIEMYCK 552
           G  +   + K G+ +                               D+   +A+++ Y +
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
            GD+  AR+ FD M  +N ++W+ MI  Y+Q+GY +EA++L+  M+  G KP+   F   
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L+A +    +  G+ I   +    G++  +   + +ID   + G   +  ++ D +  + 
Sbjct: 323 LSALASLRALSAGINIHGHVT-KIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFD-LILEK 380

Query: 673 DPVIW 677
           + V W
Sbjct: 381 NVVCW 385



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 36/224 (16%)

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM------------ 577
           QI K+   +D+ V + +I  Y + G++  AR  FD M  +N V+W+ +            
Sbjct: 77  QIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEE 136

Query: 578 -------------------IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
                              I G+ +NG   EA++L+  ++ SGV+P+D+TF +++ AC  
Sbjct: 137 SMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGE 196

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
            G   +G+ I   + +  G E  L     +I    R G    A  + D M  K D V W 
Sbjct: 197 LGDFGLGMSILG-LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRME-KRDVVSWT 254

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
            +L +     ++R A+R  +E   +  +N   +S +   YS  G
Sbjct: 255 AILDAYVETGDLREARRIFDE---MPERNEISWSAMIARYSQSG 295


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 217/685 (31%), Positives = 327/685 (47%), Gaps = 127/685 (18%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT---------- 188
            R  H  +I  G     +  N LL +Y K     +A  +FEE+  P+ +           
Sbjct: 32  ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCA 91

Query: 189 -----------------------FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
                                  + AM++G A       ALE+FR M R     D  + +
Sbjct: 92  LGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFT 151

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE-ADLHLSNSLLDMYAK 284
           SVL             +F  ++ +        Q+HC  +K G       + N+LL +Y K
Sbjct: 152 SVLSALV---------LFVGNEQQCG------QMHCAVVKTGMGCVSSSVLNALLSVYVK 196

Query: 285 NGD--------MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
                      M SA  +F  +P+R                                   
Sbjct: 197 RASELGISCSAMVSARKLFDEMPKR----------------------------------- 221

Query: 337 DEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           DE+T   M+   VR+ D+   RE+F++M     ++WNAM+S Y      +EA+ L R+M+
Sbjct: 222 DELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMR 281

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY----VASGLIGIYSKC 452
           F G++ D  T   I+S+CA +G  + GKQVHA  LK   + ++     V++ LI +Y K 
Sbjct: 282 FLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKN 341

Query: 453 QRNELAERVFHRIPELDIVCWNS-------------------------------MIAGLS 481
            + + A ++F+ +P  +I+ WN+                               MI+GL+
Sbjct: 342 NKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLA 401

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N    E    FKQMR +   P  F+FA  L++C+ L +   GRQ+HAQ+   GY + + 
Sbjct: 402 QNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLS 461

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           VG+A+I MY KCG +  A   F  M   + V+WN MI    Q+G+G +A+ L+  M+  G
Sbjct: 462 VGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEG 521

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           V PD ITF+ +LTACSH+GLV+ G   FNSM   +G+ P  DHY  M+D   RAG F  A
Sbjct: 522 VFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYA 581

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
            ++ID MP K    +WE LL+ CR+H N+ L   AAE+LF+L P+N   Y LL+NIY+ +
Sbjct: 582 RIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADV 641

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           GRW+++  VR+LM +  + K+PA S
Sbjct: 642 GRWNEVAKVRKLMRDQAVRKEPACS 666



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 170/646 (26%), Positives = 299/646 (46%), Gaps = 108/646 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            + +HAH++ +G        NRL+E+Y K +N   A+ LF+++P+ D  +   +++A C 
Sbjct: 32  ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCA 91

Query: 67  SDDLEFAYKLFDEMP--ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
             +LE   ++F+  P   R+ V +N +I+    NG    AL ++  M  + F P   T  
Sbjct: 92  LGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFT 151

Query: 125 SVFKASTALLDVEHGRRC---HGLVIKIGLD-KNIYVANALLSLYAK--------CGWTK 172
           SV   S  +L V + ++C   H  V+K G+   +  V NALLS+Y K        C    
Sbjct: 152 SVL--SALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMV 209

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI------------------- 213
            A  +F+EM + +E+T+T M++G  + D +  A E+F  M+                   
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269

Query: 214 --------RK----AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
                   RK     +  D ++ ++++  CA  G              F     G+QVH 
Sbjct: 270 FQEALTLCRKMRFLGIQFDDITYTTIISACANVG-------------SFQM---GKQVHA 313

Query: 262 LTIKLGFEAD----LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
             +K     +    L +SN+L+ +Y KN  +D A  IF  +P R++++WN +++GY    
Sbjct: 314 YILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGY---- 369

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                                          V +G ++  +  F+ MP  ++ +   M+S
Sbjct: 370 -------------------------------VNAGRMEEAKSFFEEMPVKNLLTLTVMIS 398

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
             +Q+    E +KLF++M+  G +P     A  L++C+ +G LE+G+Q+HA  +      
Sbjct: 399 GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYES 458

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
              V + +I +Y+KC   E AE VF  +P +D+V WNSMIA L  +   ++A   F QM 
Sbjct: 459 SLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQML 518

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQ-VHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           +  ++P + +F TVL++C+      +GR   ++ +E  G        + +++++C+ G  
Sbjct: 519 KEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMF 578

Query: 557 YGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGD----EAVRLYKDM 597
             AR   D M  K     W  ++ G   +G  D     A +L+K M
Sbjct: 579 SYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLM 624



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 220/462 (47%), Gaps = 39/462 (8%)

Query: 28  RLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVS 87
           R  EL   C+   SA+ LFD+MP +D  +W  +++   ++DDL  A ++F+ M E    +
Sbjct: 197 RASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAA 256

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           WN +IS  V  G  ++AL++  KM   G     IT  ++  A   +   + G++ H  ++
Sbjct: 257 WNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYIL 316

Query: 148 KIGLDKN----IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
           K  L+ N    + V+NAL++LY K      A  +F  M   N +T+ A++SG     R+ 
Sbjct: 317 KNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRME 376

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES---------DVFAQSDNKFSRNV 254
           EA   F  M  K +   +V +S +    A+ G G E          D F   D  F+  +
Sbjct: 377 EAKSFFEEMPVKNLLTLTVMISGL----AQNGFGDEGLKLFKQMRLDGFEPCDFAFAGAL 432

Query: 255 ----------HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                     +G+Q+H   + LG+E+ L + N+++ MYAK G +++AE +F  +P   +V
Sbjct: 433 TACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLV 492

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SWN MIA  GQ     KAIEL  +M   G  PD +T + +L AC  +G ++ GR  F+SM
Sbjct: 493 SWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSM 552

Query: 365 -----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                 +P    +  M+  + ++     A  +   M     KP       +L+ C   G 
Sbjct: 553 LESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMP---SKPGAPVWEALLAGCRIHGN 609

Query: 420 LESGKQVHAASLKTASHID-NYVASGLIGIYSKCQR-NELAE 459
           ++ G +      K     D  YV   L  IY+   R NE+A+
Sbjct: 610 MDLGIEAAEQLFKLMPQNDGTYVL--LSNIYADVGRWNEVAK 649


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 207/638 (32%), Positives = 341/638 (53%), Gaps = 62/638 (9%)

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE-VTFTAMMSGLAKTDRVVEALEMF 209
           LD +  VAN+LL++Y+KCG  + A  VF+ M    + V++TAM   L +     EAL + 
Sbjct: 75  LDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLL 134

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF- 268
             M+   +  ++ +L +    C         ++F  S         G  V    IK GF 
Sbjct: 135 GEMLESGLRPNAFTLCAAAHAC------FPGELFRSS---------GGTVLGFAIKTGFW 179

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
             D+ +  +L+DM+A+NGD+ +A  +F+ L ER+VV W +MI  Y Q   + KA+EL   
Sbjct: 180 GTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLG 239

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTG------------------------------- 357
           M   GFEPD  T  +M+ AC   G    G                               
Sbjct: 240 MLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQM 299

Query: 358 -------REMFDSMPSPSVSSWNAMLSSYSQSENHKE-AIKLFREMQFRGVKPDRTTLAI 409
                  R++F  MP+ +V SW A++S Y Q    +  A++L  EM    ++P+  T + 
Sbjct: 300 EQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSS 359

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L +CA +   +SG+Q+HA  +KT+    N V + L+ +Y++    E A + F ++ E +
Sbjct: 360 LLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERN 419

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           ++  +S I     ++       +  Q+   ++  + F+FA++LS+ A +    +G+Q+HA
Sbjct: 420 LLSTSSDIGETGRSNAS-----WSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHA 474

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGA-RQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
              K G+ +D  + ++L+ MY +CG +  A R F +M    N ++W  +I   A++G+ +
Sbjct: 475 LSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAE 534

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
            A+ L+ DMI SGVKP+D+T++A+L+ACSH GLV  G E F SMQ DH + P ++HY CM
Sbjct: 535 RALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACM 594

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           +D L R+G   EA   I+EMPCK D ++W+ LL +CR + N+ + + AA  +  L+P++ 
Sbjct: 595 VDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDP 654

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           APY LL+N+Y+  G WD++  +R LM    + K+   S
Sbjct: 655 APYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLS 692



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 170/672 (25%), Positives = 299/672 (44%), Gaps = 97/672 (14%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ LH  +L   + D D  + N L+ +YSKC +  +A+ +FD M                
Sbjct: 62  GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGM---------------- 105

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                            R++VSW  +   L RNG E++AL +  +M   G  P   TL +
Sbjct: 106 --------------RGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCA 151

Query: 126 VFKAS-TALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
              A     L    G    G  IK G    ++ V  AL+ ++A+ G    A  VF  + E
Sbjct: 152 AAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVE 211

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDV 242
              V +T M++   +     +A+E+F  M+      D  ++SS++  CA +G  G+    
Sbjct: 212 RTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGL---- 267

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIFSNLP 299
                        GQQ+H L ++LG  +D  +S  L+DMY K      M+ A  +F  +P
Sbjct: 268 -------------GQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMP 314

Query: 300 ERSVVSWNVMIAGYGQ-KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
             +V+SW  +I+GY Q   Q   A+ELL  M +   EP+ +T  ++L AC    D  +GR
Sbjct: 315 THNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGR 374

Query: 359 EMFDSMPSPSVSS----WNAMLSSYSQSENHKEAIKLFREMQFRG--------------- 399
           ++   +   S+ +     NA++S Y++S   +EA K F ++  R                
Sbjct: 375 QIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSN 434

Query: 400 -----------VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
                      V     T A +LS+ A +G+   G+Q+HA S+KT    D  +++ L+ +
Sbjct: 435 ASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSM 494

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           YS+C   + A R F  +  + +++ W S+I+ L+ +     A   F  M  + + P   +
Sbjct: 495 YSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVT 554

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +  VLS+C+ +    +G++    ++KD   +  +   + ++++  + G +  A +F + M
Sbjct: 555 YIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEM 614

Query: 567 HGK-NTVTWNEMI---HGYAQNGYGDEAVRLYKDMIASGVKPDD-ITFVAILTACSHSGL 621
             K + + W  ++     Y     G+ A R   D+     +P D   +V +    +H GL
Sbjct: 615 PCKADALVWKTLLGACRTYENIEIGEIAARHVIDL-----EPQDPAPYVLLSNLYAHGGL 669

Query: 622 VDVGVEIFNSMQ 633
            D    I + M+
Sbjct: 670 WDEVARIRSLMR 681



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 67/325 (20%), Positives = 152/325 (46%), Gaps = 54/325 (16%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ +HA +++  + +   + N L+ +Y++      A+  FD++  +++ S ++ +    
Sbjct: 372 SGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETG 431

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           +S+                  SW++ I ++      +  +S +             T AS
Sbjct: 432 RSN-----------------ASWSSQIESM------DVGVSTF-------------TFAS 455

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP- 184
           +  A+  +     G++ H L IK G + +  ++N+L+S+Y++CG+   A   F+EM +  
Sbjct: 456 LLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDH 515

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N +++T+++S LAK      AL +F  MI   V  + V+  +VL  C+  G         
Sbjct: 516 NVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVG-------LV 568

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-V 303
           +   ++ R++  Q+ H L  ++   A       ++D+ A++G +  A    + +P ++  
Sbjct: 569 KEGKEYFRSM--QKDHRLIPRMEHYA------CMVDLLARSGLVQEALEFINEMPCKADA 620

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQR 328
           + W  ++ G  + Y++ +  E+  R
Sbjct: 621 LVWKTLL-GACRTYENIEIGEIAAR 644


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 203/647 (31%), Positives = 343/647 (53%), Gaps = 54/647 (8%)

Query: 137 EHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           E G+ C    +   + ++N +  + ++S Y K G    A  +F++  E   V +T M+  
Sbjct: 55  ERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGA 114

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
            +K++R  +A ++F  M R     D V+  ++L  C              +D + ++ ++
Sbjct: 115 YSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGC--------------NDLEVAKELY 160

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
             Q H   +KLG   +  + N+LLD Y K G +DSA  +F  +     VS+NVMI GY  
Sbjct: 161 --QAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYAN 218

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------------ 357
              + +AIEL   M++ GF+P + T   ++ A V   D   G                  
Sbjct: 219 NGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFV 278

Query: 358 -----------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                            R++F+ MP     S+N ++++Y+     KE+I LF+E+QF   
Sbjct: 279 GNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTF 338

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
                    +LS  A+   L+ G+Q+HA  + + +  D  V++ L+ +Y+KC + E A+R
Sbjct: 339 DRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADR 398

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           +F R+     V W +MI+      L       F +MR+  +   Q +FA VL + A L+S
Sbjct: 399 IFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLAS 458

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G+Q+H+ + + G++N ++ G AL++MY  C  I  A + F+ M  +N VTWN ++  
Sbjct: 459 ILLGKQLHSCVIRSGFMN-VYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSA 517

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           YAQNG G   ++ +++MI SG +PD ++F+ ILTACSH  LV+ G++ FN M   + + P
Sbjct: 518 YAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAP 577

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
             +HYT M+D L R+G F EAE L+ +MP + D ++W  +L+SCR+H N  LA++AA +L
Sbjct: 578 KREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQL 637

Query: 701 FRLDP-KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           F +   +++APY  ++NI++  G+WD +  V++ M +  + K PAYS
Sbjct: 638 FNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYS 684



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 154/644 (23%), Positives = 284/644 (44%), Gaps = 89/644 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           + A I++ G    T   N +I+  S+      A+ L D+MP+++ +S + I+S   KS +
Sbjct: 30  IDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGN 89

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           L  A ++FD+  ER VV+W  +I A  ++     A  ++ +M   G  P ++T  ++   
Sbjct: 90  LTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTG 149

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              L   +   + H  ++K+G   N  V N LL  Y K G    A  +F EM   + V+F
Sbjct: 150 CNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSF 209

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             M++G A      EA+E+F  M          + ++V+        G++   F      
Sbjct: 210 NVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISA----SVGLDDTAF------ 259

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 GQQ+H   +K  F  ++ + N+ LD Y+K+  ++    +F+ +PE   VS+NV+
Sbjct: 260 ------GQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVI 313

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------- 360
           I  Y    +  ++I+L Q ++   F+        ML     S D++ GR++         
Sbjct: 314 ITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMA 373

Query: 361 --------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                     F  + S S   W AM+S+  Q   H+  +KLF E
Sbjct: 374 DPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYE 433

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+   V  D+ T A +L + A +  +  GKQ+H+  +++   ++ Y    L+ +Y+ C  
Sbjct: 434 MRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSG-FMNVYSGCALLDMYANCAS 492

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A + F  + E ++V WN++++  + N         F++M  +   P   SF  +L++
Sbjct: 493 IKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTA 552

Query: 515 CAKLSSSFQGRQVHAQIEKDG--YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           C+           H ++ ++G  Y ND+   S +  +  K       R+ +         
Sbjct: 553 CS-----------HCRLVEEGLKYFNDM---SGVYNLAPK-------REHY--------- 582

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
               M+    ++G  DEA +L   M     +PD+I + ++L +C
Sbjct: 583 --TAMVDALCRSGRFDEAEKLMGQM---PFEPDEIVWTSVLNSC 621



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 193/380 (50%), Gaps = 10/380 (2%)

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT-SINMLVAC-VRSGDIKTGREMFDS 363
           +N MI    ++ Q  +A +LL +M      P+  + SI+++++  V+SG++   R +FD 
Sbjct: 46  FNFMIKDLSERGQLCQARQLLDQM------PNRNSFSIDIIISGYVKSGNLTVARRIFDD 99

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
               +V +W  M+ +YS+S    +A KLF EM   G +PD  T   +L+ C  + + +  
Sbjct: 100 TDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKEL 159

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
            Q HA  +K   H+++ V + L+  Y K    + A R+F  +   D V +N MI G + N
Sbjct: 160 YQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANN 219

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
            L+ EA   F +M+     P+ F+FA V+S+   L  +  G+Q+H  + K  ++ ++FVG
Sbjct: 220 GLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVG 279

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           +A ++ Y K   +   R+ F+ M   + V++N +I  YA  G   E++ L++++  +   
Sbjct: 280 NAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFD 339

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
             +  F  +L+  + S  + +G ++   + +    +P       ++D   + G F EA+ 
Sbjct: 340 RKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMA-DPDFRVSNSLVDMYAKCGKFEEADR 398

Query: 664 LIDEMPCKDDPVIWEVLLSS 683
           +   +  +   V W  ++S+
Sbjct: 399 IFLRLSSR-STVPWTAMISA 417



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 189/414 (45%), Gaps = 58/414 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +++     + F+ N  ++ YSK +  +  + LF++MP  D  S+N I++A   
Sbjct: 260 GQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAW 319

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF-VPTHITLAS 125
              ++ +  LF E+                           +     + F  PT +++A+
Sbjct: 320 VGKVKESIDLFQELQ--------------------------FTTFDRKNFPFPTMLSIAA 353

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                 + LD++ GR+ H  V+    D +  V+N+L+ +YAKCG  + A  +F  +S  +
Sbjct: 354 ------SSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRS 407

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +TAM+S   +       L++F  M R  VS D  + + VL   A             
Sbjct: 408 TVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASA------------- 454

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +  + G+Q+H   I+ GF  +++   +LLDMYA    +  A   F  + ER+VV+
Sbjct: 455 ---NLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVT 510

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN +++ Y Q       ++  + M   G++PD V+ + +L AC     ++ G + F+ M 
Sbjct: 511 WNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMS 570

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                +P    + AM+ +  +S    EA KL  +M F   +PD      +L+SC
Sbjct: 571 GVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPF---EPDEIVWTSVLNSC 621



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/400 (23%), Positives = 158/400 (39%), Gaps = 87/400 (21%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA ++ +    D  + N L+++Y+KC     A  +F ++  +    W A++SA   
Sbjct: 361 GRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISAN-- 418

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                        V+ GL E  L ++ +M          T A V
Sbjct: 419 -----------------------------VQRGLHENGLKLFYEMRRANVSADQATFACV 449

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KAS  L  +  G++ H  VI+ G   N+Y   ALL +YA C   K A+  FEEMSE N 
Sbjct: 450 LKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNV 508

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG-VESDVFAQ 245
           VT+ A++S  A+       L+ F  MI      DSVS   +L  C+   C  VE  +   
Sbjct: 509 VTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSH--CRLVEEGLKYF 566

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           +D     N+  ++ H                +++D   ++G  D AE +   +P      
Sbjct: 567 NDMSGVYNLAPKREH--------------YTAMVDALCRSGRFDEAEKLMGQMP------ 606

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----EMF 361
                                       FEPDE+   ++L +C    +    R    ++F
Sbjct: 607 ----------------------------FEPDEIVWTSVLNSCRIHKNYALARKAAGQLF 638

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           +       + +  M + ++++      +K+ + M+ RGV+
Sbjct: 639 NMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVR 678


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 202/664 (30%), Positives = 352/664 (53%), Gaps = 61/664 (9%)

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           I   S+F + T  L     +R H L++  G  ++ +++  L++LYA  G    +   F++
Sbjct: 77  IDFNSLFDSCTKTL---LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQ 133

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           +   +  T+ +M+S   +     EA++ F +L++      D  +   VL  C        
Sbjct: 134 IQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC-------- 185

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                         V G+++HC   KLGF+ D+ ++ SL+ MY++ G +  A  +F ++P
Sbjct: 186 -----------QTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMP 234

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG-- 357
            R + SWN MI+G  Q   + +A+++L  M+  G   D VT  ++L  C + GDI T   
Sbjct: 235 FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATL 294

Query: 358 ---------------------------------REMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                            +++F  M    V SWN+++++Y Q+++
Sbjct: 295 IHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDD 354

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV-AS 443
              A   F +MQ  G++PD  TL  + S  A     ++ + VH   ++    ++  V  +
Sbjct: 355 PVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGN 414

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMY 502
            ++ +Y+K    + A +VF+ IP  D+V WN++I+G + N L  EA   ++ M +  E+ 
Sbjct: 415 AVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIK 474

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
             Q ++ ++L++ A + +  QG ++H  + K     D+FVG+ LI++Y KCG +  A   
Sbjct: 475 LNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCL 534

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F  +  +++V WN +I  +  +G+G++A++L+++M   GVKPD +TF+++L+ACSHSGLV
Sbjct: 535 FYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLV 594

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D G   F+ MQ ++G++P L HY CM+D LGRAG    A   I +MP   D  IW  LL 
Sbjct: 595 DEGKWFFHLMQ-EYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLG 653

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           +CR+H N+ L K A++ LF +D +N   Y LL+NIY+++G+W+ +  VR L  E  + K 
Sbjct: 654 ACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKT 713

Query: 743 PAYS 746
           P +S
Sbjct: 714 PGWS 717



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 163/622 (26%), Positives = 294/622 (47%), Gaps = 94/622 (15%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LHA ++ +G     F+  RL+ LY+                                 
Sbjct: 93  KRLHALLVVSGKIQSNFISIRLVNLYASLG------------------------------ 122

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALS-VYNKMSNEGFVPTHITLASV 126
            D+  +   FD++  ++V +WN++ISA VRNG   +A+   Y  +    F     T   V
Sbjct: 123 -DVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPV 181

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L+D   GR+ H  V K+G   +++VA +L+ +Y++ G+   A  +F++M   + 
Sbjct: 182 LKACQTLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDM 238

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++ AM+SGL +     +AL++   M  + +++DSV+++S+L VCA+ G     D+   +
Sbjct: 239 GSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLG-----DISTAT 293

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                       +H   IK G E +L +SN+L++MYAK G++  A+ +F  +  R VVSW
Sbjct: 294 -----------LIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSW 342

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
           N +IA Y Q      A     +M+  G EPD +T +++     +S D K  R        
Sbjct: 343 NSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMR 402

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                       ++F+ +P   V SWN ++S Y+Q+    EAI+
Sbjct: 403 RGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIE 462

Query: 391 LFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           ++R M + R +K ++ T   IL++ A +G L+ G ++H   +KT  H+D +V + LI +Y
Sbjct: 463 VYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLY 522

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            KC R   A  +F+++P    V WN++I+   ++    +A   F++M+   + P   +F 
Sbjct: 523 GKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFI 582

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHG 568
           ++LS+C+      +G+     +++ G    +     ++++  + G +  A  F  DM   
Sbjct: 583 SLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLH 642

Query: 569 KNTVTWNEM-----IHGYAQNG 585
            +   W  +     IHG  + G
Sbjct: 643 PDASIWGALLGACRIHGNIELG 664



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 220/457 (48%), Gaps = 84/457 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +H  + + G   D F+   LI +YS+      A+ LFD MP +D+ SWNA     
Sbjct: 189 VDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNA----- 243

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +IS L++NG   +AL V ++M  EG     +T+A
Sbjct: 244 --------------------------MISGLIQNGNAAQALDVLDEMRLEGINMDSVTVA 277

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+      L D+      H  VIK GL+  ++V+NAL+++YAK G    A  VF++M   
Sbjct: 278 SILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLR 337

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ ++++   + D  V A   F  M    +  D ++L S+  + A+           
Sbjct: 338 DVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQS---------- 387

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEAD-LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
             D K SR+VHG       ++ G+  + + + N+++DMYAK G +DSA  +F+ +P + V
Sbjct: 388 -RDYKNSRSVHG-----FIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDV 441

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGRE--- 359
           VSWN +I+GY Q   +++AIE+ + M+ C   + ++ T +++L A    G ++ G     
Sbjct: 442 VSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHG 501

Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                           +F  +P  S   WNA++S +    + ++
Sbjct: 502 HLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEK 561

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           A+KLFREMQ  GVKPD  T   +LS+C+  G+++ GK
Sbjct: 562 ALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGK 598



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 197/422 (46%), Gaps = 56/422 (13%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           L+H +++++GL  + F+ N LI +Y+K  N   AQ +F +M  +D+ SWN+I++A  ++D
Sbjct: 294 LIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQND 353

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
           D   A   F +M                 NGLE                P  +TL S+  
Sbjct: 354 DPVTARGFFFKMQ---------------LNGLE----------------PDLLTLVSLAS 382

Query: 129 ASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            +    D ++ R  HG +++ G L + + + NA++ +YAK G    A  VF  +   + V
Sbjct: 383 IAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVV 442

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           ++  ++SG  +     EA+E++R+M   + + ++  +  S+L   A  G   +       
Sbjct: 443 SWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQ------- 495

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G ++H   IK     D+ +   L+D+Y K G +  A  +F  +P  S V W
Sbjct: 496 ---------GMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPW 546

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N +I+ +G      KA++L + M+  G +PD VT I++L AC  SG +  G+  F  M  
Sbjct: 547 NAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE 606

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
               PS+  +  M+    ++   + A    ++M    + PD +    +L +C   G +E 
Sbjct: 607 YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMP---LHPDASIWGALLGACRIHGNIEL 663

Query: 423 GK 424
           GK
Sbjct: 664 GK 665



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 8/125 (6%)

Query: 3   AHVA----GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           AHV     G  +H H+++  L  D F+   LI+LY KC     A  LF ++P +    WN
Sbjct: 488 AHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWN 547

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE 114
           AI+S        E A KLF EM +  V    V++ +L+SA   +GL ++    ++ M   
Sbjct: 548 AIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEY 607

Query: 115 GFVPT 119
           G  P+
Sbjct: 608 GIKPS 612


>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 222/769 (28%), Positives = 360/769 (46%), Gaps = 91/769 (11%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
            HA  +  G   + F+  +LI LY   N+  S+  LF  +P KD +              
Sbjct: 30  FHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFL------------- 76

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                             WN+ +  L    L  + LS Y+ M +E  +P H T   V  +
Sbjct: 77  ------------------WNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASS 118

Query: 130 STALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
               + +  G   H L  K+G   +N  V ++ +SLY++C     AV VF+E+   + V 
Sbjct: 119 YAHFMMIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVA 178

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           +TA++ G  +       LE    M R  V  DS   ++         CG   D+      
Sbjct: 179 WTALVIGYVQNGESEMGLECISEMYR--VGDDSQKPNARTLEGGFLACGNLGDL------ 230

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                V G+ +H L +K G    L + +S+L MY K G    A   FS +  + ++SW  
Sbjct: 231 -----VSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTS 285

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG-----DIKTGR----- 358
           MI  Y +    +  +     M      PD      M++ C+ SG     D+  G+     
Sbjct: 286 MIRVYARFGMMSDCVRFFWEMLENQVCPD-----GMVIGCILSGFGNSVDVYGGKAFHGL 340

Query: 359 ---------EMFDS--------------------MPSPSVSSWNAMLSSYSQSENHKEAI 389
                    EM D+                        S+  WN M+  Y +   + + I
Sbjct: 341 IIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQRSQGSIEYWNFMIVGYGRIGKNVKCI 400

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +LFREMQ+ G++ +   +   ++SC  +G +  G+ +H   +K        V + LI +Y
Sbjct: 401 QLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMY 460

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            KC +  ++ R+F+R  E D++ WN++I+         EA   F  M   +  P   +  
Sbjct: 461 GKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLV 519

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
            VLS+C+ L+   +G ++H  I + G+  ++ +G+AL++MY KCG +  +R+ FD M  K
Sbjct: 520 VVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEK 579

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + + WN MI GY  NGY + A+ ++  M  S VKP++ITF+++L+AC+H+GLV+ G  +F
Sbjct: 580 DVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVF 639

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
             MQ  + V+P L HYTCM+D LGR+ +  EAE L+  MP   D  +W  LLS+C+ H  
Sbjct: 640 AKMQ-SYSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQ 698

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC 738
           + +  R  +     +P+N   Y ++AN+YSS+GRWD+   VR  M + C
Sbjct: 699 IEMGIRIGKNAIDSEPENDGYYIMVANMYSSIGRWDEAENVRRTMKDRC 747



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 207/460 (45%), Gaps = 57/460 (12%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK  H  I+R     D  + N L+ +Y                               C
Sbjct: 333 GGKAFHGLIIRRHYAPDEMVDNSLLSMY-------------------------------C 361

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   L FA +LF +  + ++  WN +I    R G   K + ++ +M   G     + + S
Sbjct: 362 KFGMLSFAERLF-QRSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVS 420

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              +   L ++  GR  H  VIK  +D+ I V N+L+ +Y KC     +  +F   SE +
Sbjct: 421 AIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERD 479

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            + + A++S         EA+ +F +MI +  + ++ +L  VL  C+          F +
Sbjct: 480 VILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLA-------FLE 532

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+++H    + GF+ +L L  +L+DMYAK G ++ +  +F ++ E+ V+ 
Sbjct: 533 K---------GERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVIC 583

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI+GYG    +  AIE+   M+    +P+E+T +++L AC  +G ++ G+ +F  M 
Sbjct: 584 WNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQ 643

Query: 366 S----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           S    P++  +  M+    +S N +EA +L   M    + PD      +LS+C     +E
Sbjct: 644 SYSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMP---IPPDGGVWGALLSACKTHNQIE 700

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            G ++   ++ +    D Y    +  +YS   R + AE V
Sbjct: 701 MGIRIGKNAIDSEPENDGYYIM-VANMYSSIGRWDEAENV 739



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 196/459 (42%), Gaps = 84/459 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V+G+ LH  +++NG+     + + ++ +Y KC     A   F ++ +KD+ SW +++   
Sbjct: 231 VSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVY 290

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +   +    + F EM E  V                                P  + + 
Sbjct: 291 ARFGMMSDCVRFFWEMLENQV-------------------------------CPDGMVIG 319

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            +       +DV  G+  HGL+I+     +  V N+LLS+Y K G    A  +F+  S+ 
Sbjct: 320 CILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR-SQG 378

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +   +  M+ G  +  + V+ +++FR M    +  +SV + S +  C + G   E ++  
Sbjct: 379 SIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLG---EINL-- 433

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+ +HC  IK   +  + ++NSL++MY K   M+ +  IF N  ER V+
Sbjct: 434 -----------GRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIF-NRSERDVI 481

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
            WN +I+ +       +AI L   M      P+  T + +L AC                
Sbjct: 482 LWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYI 541

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + G ++  RE+FDSM    V  WNAM+S Y  +   + AI
Sbjct: 542 NEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAI 601

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
           ++F  M+   VKP+  T   +LS+CA  G++E GK V A
Sbjct: 602 EIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFA 640



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 5/257 (1%)

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L+S    HA ++ T +  + ++A+ LI +Y        +  +FH +P  D   WNS +  
Sbjct: 24  LQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKT 83

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV-N 538
           L   SL  +   F+  MR   + P  F+F  V SS A       G  +HA   K G+   
Sbjct: 84  LFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPE 143

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           +  VGS+ + +Y +C ++  A + FD +  ++ V W  ++ GY QNG  +  +    +M 
Sbjct: 144 NSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMY 203

Query: 599 ASG---VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
             G    KP+  T      AC + G +  G    + + + +G+  +LD  + ++    + 
Sbjct: 204 RVGDDSQKPNARTLEGGFLACGNLGDLVSG-RCLHGLVVKNGIGCLLDIQSSVLSMYCKC 262

Query: 656 GHFHEAEMLIDEMPCKD 672
           G   EA     E+  KD
Sbjct: 263 GVPREAYQSFSEVINKD 279


>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 642

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 190/585 (32%), Positives = 306/585 (52%), Gaps = 54/585 (9%)

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
           ++++    ++ A  +F+ +  P     +  +S L++     + L+ F  M RK   + S 
Sbjct: 61  AIFSDATTSRAARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSG 120

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
            +  V   CA                  + +  G+QVHC  +  G   D+ +  +L+D Y
Sbjct: 121 CVPLVFKSCALT----------------ASSCQGRQVHCHALVRGLLGDVFVLTALVDFY 164

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           AKNGDM+SA  +F  +P +  +  N +I GY                             
Sbjct: 165 AKNGDMESAVSVFDEMPVKDPIPINCLITGYS---------------------------- 196

Query: 343 NMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                  ++GD+   R +FD M   + +SWN+M++ Y+     +EA+ LF  M   G +P
Sbjct: 197 -------KAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARP 249

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAERV 461
           +  T+  + S CA  G L++GK+V    L     + N +  + L+ +Y KC+  + A R 
Sbjct: 250 NAITITSVFSICAKSGDLDTGKRVR--DLIGEDDLQNVIVHTALMEMYVKCRAIDDARRE 307

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F R+ + D+V W++MIAG + N   +E+   F++M+  +  P + +   V+S+CA+L S 
Sbjct: 308 FDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSD 367

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
               Q+    E        ++GSALI+MY +CG +  AR  F  M  K  +TWN MI G 
Sbjct: 368 ELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGL 427

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           A NG+ ++A+ LY+ M  +GV+P++ITFVA+L AC+H+GLVD G+  F  M+ +H V P 
Sbjct: 428 AMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQ 487

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           ++H  C++D L ++G   EA   I +M  + + VIW  LLSSCR HA+V LAK A+ +L 
Sbjct: 488 VEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLL 547

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            ++P NS+ Y LL+NIY+  G W D R +R+LM    + K  AYS
Sbjct: 548 AMEPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYS 592



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 215/423 (50%), Gaps = 25/423 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H L  GL  D F+   L++ Y+K  +  SA  +FD+MP KD    N +++   K
Sbjct: 138 GRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPINCLITGYSK 197

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           + D++ A +LFD M  R   SWN++I+     G   +AL+++++M +EG  P  IT+ SV
Sbjct: 198 AGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNAITITSV 257

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F       D++ G+R   L+ +  L +N+ V  AL+ +Y KC     A   F+ MS+ + 
Sbjct: 258 FSICAKSGDLDTGKRVRDLIGEDDL-QNVIVHTALMEMYVKCRAIDDARREFDRMSQRDV 316

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V ++ M++G A+  R +E+LE+F  M       + V+L  V+  CA+ G    SD   + 
Sbjct: 317 VAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLG----SDELVEQ 372

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
              ++ N    Q   LT  LG        ++L+DMY + G +  A  +FS + ++ V++W
Sbjct: 373 IGNYAEN----QRLPLTSYLG--------SALIDMYTRCGHVGRARSVFSRMEQKGVITW 420

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N MI G      +  AI L ++M   G +P+E+T + +L AC  +G +  G   F+ M  
Sbjct: 421 NSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKR 480

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               SP V     ++    +S    EA K   +M+   V+P+      +LSSC A   +E
Sbjct: 481 EHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDME---VEPNAVIWTTLLSSCRAHADVE 537

Query: 422 SGK 424
             K
Sbjct: 538 LAK 540



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 146/610 (23%), Positives = 254/610 (41%), Gaps = 152/610 (24%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG-FVPTHITLASVFKAST 131
           A  LFD +P       +  +S+L R       L  ++ M  +G +VP+   +  VFK+  
Sbjct: 72  ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSG-CVPLVFKSCA 130

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
                  GR+ H   +  GL  +++V  AL+  YAK G  + AV VF+EM   + +    
Sbjct: 131 LTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPINC 190

Query: 192 MMSGLAKTDRV-------------------------------VEALEMFRLMIRKAVSID 220
           +++G +K   V                                EAL +F  M+ +    +
Sbjct: 191 LITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPN 250

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH---LSNS 277
           +++++SV  +CA+ G     D+      K  R++ G            E DL    +  +
Sbjct: 251 AITITSVFSICAKSG-----DL---DTGKRVRDLIG------------EDDLQNVIVHTA 290

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L++MY K   +D A   F  + +R VV+W+ MIAGY Q  +  +++EL +RMK+    P+
Sbjct: 291 LMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPN 350

Query: 338 EVTSINMLVAC-----------------------------------VRSGDIKTGREMFD 362
           EVT + ++ AC                                    R G +   R +F 
Sbjct: 351 EVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFS 410

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            M    V +WN+M+   + +   ++AI L+ +M   GV+P+  T   +L++C   G+++ 
Sbjct: 411 RMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQ 470

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL-AERVFHRIPELDIVCWNSMIAGLS 481
           G                      +  + + +R  L + +V H    +D++C +    GL 
Sbjct: 471 G----------------------MAFFEEMKREHLVSPQVEHCACIVDLLCKS---GGL- 504

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC--------AKLSSSFQGRQVHAQIEK 533
                 EA+ F   M   E+ P    + T+LSSC        AKL+S    R++ A +E 
Sbjct: 505 -----WEAYKFICDM---EVEPNAVIWTTLLSSCRAHADVELAKLAS----RKLLA-MEP 551

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT-----VTWNEM---IHGY-AQN 584
           D   + I+V   L  +Y   G    AR+  D+M  KN       +W ++   +H +  Q+
Sbjct: 552 DN--SSIYV--LLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQD 607

Query: 585 GYGDEAVRLY 594
            Y   +  +Y
Sbjct: 608 TYHPRSAEIY 617


>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
          Length = 728

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 210/651 (32%), Positives = 333/651 (51%), Gaps = 114/651 (17%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV----------- 202
           ++ V+N ++S Y + G    A  +F+EM E NEV+++A++SGL K  RV           
Sbjct: 86  DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145

Query: 203 --------------------VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
                                EAL++F  ++   V  + V+ +SV+  C   G       
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELG------- 198

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
               D     ++ G     L +K GFE  L +SNSL+ +  + G++D A  +F  + +R 
Sbjct: 199 ----DFGLGMSILG-----LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRD 249

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           VVSW  ++  Y                                   V +GD++  R +FD
Sbjct: 250 VVSWTAILDAY-----------------------------------VETGDLREARRIFD 274

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            MP  +  SW+AM++ YSQS   +EA+KLF +M   G KP+ +  A  LS+ A++  L +
Sbjct: 275 EMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSA 334

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           G  +H    K     D ++ S LI +Y KC + +    VF  I E ++VCWNSM+ G S+
Sbjct: 335 GINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSI 394

Query: 483 NS---------------------------LDIE----AFMFFKQMRQNEMYPTQFSFATV 511
           N                            L+ E        F  +  +   P + +F++V
Sbjct: 395 NGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSV 454

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L +CA ++S  +G  VH +I K G   DIFVG+AL +MY KCGDI  ++Q F+ M  KN 
Sbjct: 455 LCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNE 514

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           ++W  MI G A++G+  E++ L+++M   S V P+++  +++L ACSH GLVD G+  FN
Sbjct: 515 ISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFN 574

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM+  +G++P   HYTC++D L R+G  +EAE  I  +P + +   W  LLS C+ + + 
Sbjct: 575 SMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDE 634

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           ++A+R A++L++L   NSA Y LL+NIY+S GRW D+  +R+LM E  + K
Sbjct: 635 KIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKK 685



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 162/654 (24%), Positives = 300/654 (45%), Gaps = 126/654 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKC------------------------------ 36
           G +LHAH+++ G     ++  +L+ LY  C                              
Sbjct: 40  GNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQ 99

Query: 37  -NNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISAL 95
             N   A+ LFD+MP ++  SW+A++S   K   +E +   F+  P +NVVSW   IS  
Sbjct: 100 WGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGF 159

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNI 155
           VRNGL  +AL ++ ++   G  P  +T  SV +A   L D   G    GLV+K G +  +
Sbjct: 160 VRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYL 219

Query: 156 YVANALLSLYAKCG-------------------WT------------KHAVPVFEEMSEP 184
            V+N+L++L  + G                   WT            + A  +F+EM E 
Sbjct: 220 SVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPER 279

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA----VSIDSVSLSSVLGVCAREGCGVES 240
           NE++++AM++  +++    EAL++F  M+++     +S  + +LS++  + A    G+  
Sbjct: 280 NEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSA-GI-- 336

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                       N+HG        K+G + D+ + +SL+D+Y K G  D   ++F  + E
Sbjct: 337 ------------NIHGH-----VTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE 379

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           ++VV WN M+ GY                           SIN        G ++   E+
Sbjct: 380 KNVVCWNSMVGGY---------------------------SIN--------GRLEEXEEL 404

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F+ +P  +  SW  +J+ Y ++E  ++ +++F  +   G  P+++T + +L +CA++  L
Sbjct: 405 FELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASL 464

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
           + G  VH   +K     D +V + L  +Y+KC     +++VF R+PE + + W  MI GL
Sbjct: 465 DKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGL 524

Query: 481 SLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK-DGYVN 538
           + +   +E+ + F++M R +E+ P +    +VL +C+      +G      +EK  G   
Sbjct: 525 AESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKP 584

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAV 591
                + ++++  + G +Y A +F   +  +     W  ++ G  +  Y DE +
Sbjct: 585 KGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKK--YKDEKI 636



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 213/498 (42%), Gaps = 71/498 (14%)

Query: 249 KFSRN---VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           KFS       G  +H   IK GF +  +++  LL +Y         + I        +V 
Sbjct: 30  KFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVV 89

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
            N MI+ Y Q     +A  L   M     E +EV+   ++   ++ G ++     F+  P
Sbjct: 90  SNCMISAYVQWGNLVQARLLFDEMP----ERNEVSWSALISGLMKYGRVEESMWYFERNP 145

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
             +V SW A +S + ++  + EA+KLF  +   GV+P+  T   ++ +C  +G    G  
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMS 205

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR--------------------- 464
           +    +K        V++ LI +  +    +LA RVF R                     
Sbjct: 206 ILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGD 265

Query: 465 ----------IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
                     +PE + + W++MIA  S +    EA   F +M Q    P    FA  LS+
Sbjct: 266 LREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSA 325

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
            A L +   G  +H  + K G   D+F+GS+LI++YCKCG     R  FD++  KN V W
Sbjct: 326 LASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCW 385

Query: 575 NEMIHGYAQNG-------------------YG------------DEAVRLYKDMIASGVK 603
           N M+ GY+ NG                   +G            ++ + ++  ++ SG  
Sbjct: 386 NSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQT 445

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           P+  TF ++L AC+    +D G+ +   + +  G++  +   T + D   + G    ++ 
Sbjct: 446 PNKSTFSSVLCACASIASLDKGMNVHGKI-IKLGIQYDIFVGTALTDMYAKCGDIGSSKQ 504

Query: 664 LIDEMPCKDDPVIWEVLL 681
           + + MP K++ + W V++
Sbjct: 505 VFERMPEKNE-ISWTVMI 521



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 198/414 (47%), Gaps = 41/414 (9%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A  AG  +H H+ + G+  D F+ + LI+LY KC      + +FD +  K++  WN+++
Sbjct: 330 RALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMV 389

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                +  LE   +LF+ +PE+N  SW  +J+  + N   EK L V+N +   G  P   
Sbjct: 390 GGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKS 449

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T +SV  A  ++  ++ G   HG +IK+G+  +I+V  AL  +YAKCG    +  VFE M
Sbjct: 450 TFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERM 509

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVES 240
            E NE+++T M+ GLA++   VE+L +F  M R + V+ + + L SVL  C+   CG+  
Sbjct: 510 PEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSH--CGLVD 567

Query: 241 D---VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                F   +  +     G+   C                ++D+ +++G +  AE     
Sbjct: 568 KGLWYFNSMEKVYGIKPKGKHYTC----------------VVDLLSRSGRLYEAEEFIRT 611

Query: 298 LP-ERSVVSWNVMIAGYGQKYQSTKAIEL-------LQRMKSCGFEPDEVTSINMLVACV 349
           +P +    +W  +++G  +KY+  K  E        L    S G+    V   N+  +  
Sbjct: 612 IPFQPEANAWAALLSGC-KKYKDEKIAERTAKKLWQLAENNSAGY----VLLSNIYASAG 666

Query: 350 RSGDIKTGREMF--DSMPSPSVSSW----NAMLSSYSQSENHKEAIKLFREMQF 397
           R  D+   R++     +      SW    N + S YS+  +H ++ +++  +Q 
Sbjct: 667 RWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQL 720



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/365 (20%), Positives = 144/365 (39%), Gaps = 95/365 (26%)

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR----------- 454
           T   +L   +  G++  G  +HA  +KT      Y+A  L+ +Y  C++           
Sbjct: 23  TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82

Query: 455 -------------------NELAER-VFHRIPELDIVCWNSMIAGL-------------- 480
                              N +  R +F  +PE + V W+++I+GL              
Sbjct: 83  DGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFE 142

Query: 481 -----------------SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
                              N L+ EA   F ++ ++ + P   +F +V+ +C +L     
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202

Query: 524 GRQVHAQIEKDGYVN-------------------------------DIFVGSALIEMYCK 552
           G  +   + K G+ +                               D+   +A+++ Y +
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
            GD+  AR+ FD M  +N ++W+ MI  Y+Q+GY +EA++L+  M+  G KP+   F   
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L+A +    +  G+ I   +    G++  +   + +ID   + G   +  ++ D +  + 
Sbjct: 323 LSALASLRALSAGINIHGHVT-KIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFD-LILEK 380

Query: 673 DPVIW 677
           + V W
Sbjct: 381 NVVCW 385



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 36/224 (16%)

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM------------ 577
           QI K+   +D+ V + +I  Y + G++  AR  FD M  +N V+W+ +            
Sbjct: 77  QIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEE 136

Query: 578 -------------------IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
                              I G+ +NG   EA++L+  ++ SGV+P+D+TF +++ AC  
Sbjct: 137 SMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGE 196

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
            G   +G+ I   + +  G E  L     +I    R G    A  + D M  K D V W 
Sbjct: 197 LGDFGLGMSILG-LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRME-KRDVVSWT 254

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
            +L +     ++R A+R  +E   +  +N   +S +   YS  G
Sbjct: 255 AILDAYVETGDLREARRIFDE---MPERNEISWSAMIARYSQSG 295


>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 210/651 (32%), Positives = 332/651 (50%), Gaps = 114/651 (17%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV----------- 202
           ++ V+N ++S Y + G    A  +F+EM E NEV+++A++SGL K  RV           
Sbjct: 86  DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145

Query: 203 --------------------VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
                                EAL++F  ++   V  + V+ +SV+  C   G       
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELG------- 198

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
               D     ++ G     L +K GFE  L +SNSL+ +  + G++D A  +F  + +R 
Sbjct: 199 ----DFGLGMSILG-----LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRD 249

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           VVSW  ++  Y                                   V +GD++  R +FD
Sbjct: 250 VVSWTAILDAY-----------------------------------VETGDLREARRIFD 274

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            MP  +  SW+AM++ YSQS   +EA+KLF +M   G KP+ +  A  LS+ A++  L +
Sbjct: 275 EMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSA 334

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           G  +H    K     D ++ S LI +Y KC + +    VF  I E ++VCWNSM+ G S+
Sbjct: 335 GINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSI 394

Query: 483 NSL---------------DIEAFMFFKQMRQNEM----------------YPTQFSFATV 511
           N                 D+          +NE                  P + +F++V
Sbjct: 395 NGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSV 454

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L +CA ++S  +G  VH +I K G   DIFVG+AL +MY KCGDI  ++Q F+ M  KN 
Sbjct: 455 LCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNE 514

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           ++W  MI G A++G+  E++ L+++M   S V P+++  +++L ACSH GLVD G+  FN
Sbjct: 515 ISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFN 574

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM+  +G++P   HYTC++D L R+G  +EAE  I  +P + +   W  LLS C+ + + 
Sbjct: 575 SMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDE 634

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           ++A+R A++L++L   NSA Y LL+NIY+S GRW D+  +R+LM E  + K
Sbjct: 635 KIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKK 685



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 159/638 (24%), Positives = 296/638 (46%), Gaps = 94/638 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCN----------------------------- 37
           G +LHAH+++ G     ++  +L+ LY  C                              
Sbjct: 40  GNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQ 99

Query: 38  --NTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISAL 95
             N   A+ LFD+MP ++  SW+A++S   K   +E +   F+  P +NVVSW   IS  
Sbjct: 100 WGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGF 159

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNI 155
           VRNGL  +AL ++ ++   G  P  +T  SV +A   L D   G    GLV+K G +  +
Sbjct: 160 VRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYL 219

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
            V+N+L++L  + G    A  VF+ M + + V++TA++    +T  + EA  +F  M  +
Sbjct: 220 SVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPER 279

Query: 216 AVSIDSVSLSSVLGVCAREGCGVES-DVFAQ-SDNKFSRNVH-----------------G 256
               + +S S+++   ++ G   E+  +F++     F  N+                  G
Sbjct: 280 ----NEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAG 335

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
             +H    K+G + D+ + +SL+D+Y K G  D   ++F  + E++VV WN M+ GY   
Sbjct: 336 INIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGY--- 392

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                   SIN        G ++   E+F+ +P  +  SW  ++
Sbjct: 393 ------------------------SIN--------GRLEETEELFELIPEKNDVSWGTII 420

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           + Y ++E  ++ +++F  +   G  P+++T + +L +CA++  L+ G  VH   +K    
Sbjct: 421 AGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQ 480

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D +V + L  +Y+KC     +++VF R+PE + + W  MI GL+ +   +E+ + F++M
Sbjct: 481 YDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEM 540

Query: 497 -RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK-DGYVNDIFVGSALIEMYCKCG 554
            R +E+ P +    +VL +C+      +G      +EK  G        + ++++  + G
Sbjct: 541 ERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSG 600

Query: 555 DIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAV 591
            +Y A +F   +  +     W  ++ G  +  Y DE +
Sbjct: 601 RLYEAEEFIRTIPFQPEANAWAALLSGCKK--YKDEKI 636



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 204/474 (43%), Gaps = 99/474 (20%)

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           +DL +SN ++  Y + G++  A ++F  +PER+ VSW+ +I+G                 
Sbjct: 85  SDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGL---------------- 128

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                              ++ G ++     F+  P  +V SW A +S + ++  + EA+
Sbjct: 129 -------------------MKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEAL 169

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           KLF  +   GV+P+  T   ++ +C  +G    G  +    +K        V++ LI + 
Sbjct: 170 KLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLS 229

Query: 450 SKCQRNELAERVFHR-------------------------------IPELDIVCWNSMIA 478
            +    +LA RVF R                               +PE + + W++MIA
Sbjct: 230 LRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIA 289

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
             S +    EA   F +M Q    P    FA  LS+ A L +   G  +H  + K G   
Sbjct: 290 RYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDK 349

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG------------- 585
           D+F+GS+LI++YCKCG     R  FD++  KN V WN M+ GY+ NG             
Sbjct: 350 DVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIP 409

Query: 586 ------YG------------DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
                 +G            ++ + ++  ++ SG  P+  TF ++L AC+    +D G+ 
Sbjct: 410 EKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMN 469

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           +   + +  G++  +   T + D   + G    ++ + + MP K++ + W V++
Sbjct: 470 VHGKI-IKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNE-ISWTVMI 521



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 199/414 (48%), Gaps = 41/414 (9%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A  AG  +H H+ + G+  D F+ + LI+LY KC      + +FD +  K++  WN+++
Sbjct: 330 RALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMV 389

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                +  LE   +LF+ +PE+N VSW  +I+  + N   EK L V+N +   G  P   
Sbjct: 390 GGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKS 449

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T +SV  A  ++  ++ G   HG +IK+G+  +I+V  AL  +YAKCG    +  VFE M
Sbjct: 450 TFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERM 509

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVES 240
            E NE+++T M+ GLA++   VE+L +F  M R + V+ + + L SVL  C+   CG+  
Sbjct: 510 PEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSH--CGLVD 567

Query: 241 D---VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                F   +  +     G+   C                ++D+ +++G +  AE     
Sbjct: 568 KGLWYFNSMEKVYGIKPKGKHYTC----------------VVDLLSRSGRLYEAEEFIRT 611

Query: 298 LP-ERSVVSWNVMIAGYGQKYQSTKAIEL-------LQRMKSCGFEPDEVTSINMLVACV 349
           +P +    +W  +++G  +KY+  K  E        L    S G+    V   N+  +  
Sbjct: 612 IPFQPEANAWAALLSGC-KKYKDEKIAERTAKKLWQLAENNSAGY----VLLSNIYASAG 666

Query: 350 RSGDIKTGREMF--DSMPSPSVSSW----NAMLSSYSQSENHKEAIKLFREMQF 397
           R  D+   R++     +      SW    N + S YS+  +H ++ +++  +Q 
Sbjct: 667 RWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQL 720



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/354 (20%), Positives = 139/354 (39%), Gaps = 94/354 (26%)

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR----------- 454
           T   +L   +  G++  G  +HA  +KT      Y+A  L+ +Y  C++           
Sbjct: 23  TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82

Query: 455 -------------------NELAER-VFHRIPELDIVCWNSMIAGL-------------- 480
                              N +  R +F  +PE + V W+++I+GL              
Sbjct: 83  DGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFE 142

Query: 481 -----------------SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
                              N L+ EA   F ++ ++ + P   +F +V+ +C +L     
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202

Query: 524 GRQVHAQIEKDGYVN-------------------------------DIFVGSALIEMYCK 552
           G  +   + K G+ +                               D+   +A+++ Y +
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
            GD+  AR+ FD M  +N ++W+ MI  Y+Q+GY +EA++L+  M+  G KP+   F   
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           L+A +    +  G+ I   +    G++  +   + +ID   + G   +  ++ D
Sbjct: 323 LSALASLRALSAGINIHGHVT-KIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFD 375



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 36/224 (16%)

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM------------ 577
           QI K+   +D+ V + +I  Y + G++  AR  FD M  +N V+W+ +            
Sbjct: 77  QIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEE 136

Query: 578 -------------------IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
                              I G+ +NG   EA++L+  ++ SGV+P+D+TF +++ AC  
Sbjct: 137 SMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGE 196

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
            G   +G+ I   + +  G E  L     +I    R G    A  + D M  K D V W 
Sbjct: 197 LGDFGLGMSILG-LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRME-KRDVVSWT 254

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
            +L +     ++R A+R  +E   +  +N   +S +   YS  G
Sbjct: 255 AILDAYVETGDLREARRIFDE---MPERNEISWSAMIARYSQSG 295


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 184/511 (36%), Positives = 285/511 (55%), Gaps = 36/511 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G  VH   +K GF A   + N+L+  YAK+  ++ A ++F  +P+R ++SWN +I G   
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------------------------ 351
                KA+EL  RM   G E D  T ++++ ACV+S                        
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 352 -----------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                       D ++  ++F +M   +V SW AM++SY+++ +  +   LF+EM   G+
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           +PD   +   L + A    L+ GK VH  +++        VA+ L+ +Y KC   E A  
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           +F  + + D + WN++I G S ++L  EAF  F +M   ++ P   + A +L + A LSS
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLL-QLRPNAVTMACILPAAASLSS 301

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
             +GR++HA   + GY+ D FV +AL++MY KCG +  AR+ FDM+  KN ++W  MI G
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           Y  +G G +A+ L++ M  SG++PD  +F AIL ACSHSGL D G   FN+M+ +H +EP
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
            L HY CM+D L   G+  EA   I+ MP + D  IW  LL  CR+H NV+LA++ AE +
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMV 481

Query: 701 FRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
           F L+P+N+  Y LLANIY+   RW+ +R ++
Sbjct: 482 FELEPENTGYYVLLANIYAEAERWEAVRKLK 512



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 214/460 (46%), Gaps = 53/460 (11%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           HG ++K G      V NAL+S YAK    + A+ VF+EM + + +++ +++ G A     
Sbjct: 7   HGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLY 66

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            +A+E+F  M  +   +DS +L SV+  C             QS   F     G  VH  
Sbjct: 67  DKAVELFVRMWLEGQELDSTTLLSVMPAC------------VQSHYSFI----GGVVHGY 110

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
           +++ G  ++  L N+LLDMY+   D  S   IF N+ +++VVSW  MI  Y +     K 
Sbjct: 111 SVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKV 170

Query: 323 IELLQRMKSCGFEPDEVTSINMLVAC---------------------------------- 348
             L Q M   G  PD     + L A                                   
Sbjct: 171 AGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEM 230

Query: 349 -VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
            V+ G ++  R +FD +      SWN ++  YS+S    EA  LF EM  + ++P+  T+
Sbjct: 231 YVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTM 289

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           A IL + A++  LE G+++HA +++     DN+VA+ L+ +Y KC    LA R+F  +  
Sbjct: 290 ACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTN 349

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            +++ W  MIAG  ++    +A   F+QM+ + + P   SF+ +L +C+      +G + 
Sbjct: 350 KNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRF 409

Query: 528 HAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMM 566
              +  +  +       A ++++ C  G++  A +F + M
Sbjct: 410 FNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETM 449



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/516 (23%), Positives = 234/516 (45%), Gaps = 64/516 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G ++H + +R GL  +T L N L+++YS C++  S   +F  M  K++ SW A       
Sbjct: 104 GGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTA------- 156

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I++  R G  +K   ++ +M  EG  P    + S 
Sbjct: 157 ------------------------MITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSA 192

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      ++HG+  HG  I+ G+++ + VANAL+ +Y KCG+ + A  +F+ +++ + 
Sbjct: 193 LDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDT 252

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++  ++ G ++++   EA  +F  M+ + +  ++V+++ +L   A              
Sbjct: 253 ISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAA-------------- 297

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S    G+++H   ++ G+  D  ++N+L+DMY K G +  A  +F  L  ++++SW
Sbjct: 298 --SLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISW 355

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
            +MIAGYG   +   AI L ++MK  G +PD  +   +L AC  SG    G   F++M +
Sbjct: 356 TIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRN 415

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +  M+     + N KEA +    M    ++PD +    +L  C     ++
Sbjct: 416 EHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMP---IEPDSSIWVSLLRGCRIHRNVK 472

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
             ++V     +       Y    L  IY++ +R E   ++ +++    +        G S
Sbjct: 473 LAEKVAEMVFELEPENTGYYVL-LANIYAEAERWEAVRKLKNKVGGRGL----RENTGCS 527

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
              +  +A +FF    +N  +P     A  L   A+
Sbjct: 528 WIEVRGKAHIFFA---ENRNHPQGMRIAEFLDDVAR 560



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 190/401 (47%), Gaps = 52/401 (12%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA++S   KS+ +E A  +FDEMP+R+++SWN++I     NGL +KA+ ++ +M  EG  
Sbjct: 23  NALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQE 82

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
               TL SV  A         G   HG  ++ GL     + NALL +Y+ C   +    +
Sbjct: 83  LDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKI 142

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  M + N V++TAM++   +     +   +F+ M  + +  D  +++S L         
Sbjct: 143 FRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSAL--------- 193

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
              D FA +++      HG+ VH   I+ G E  L ++N+L++MY K G M+ A  IF +
Sbjct: 194 ---DAFAGNESL----KHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDH 246

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           + ++  +SWN +I GY +   + +A  L   M      P+ VT   +L A      ++ G
Sbjct: 247 VTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSSLERG 305

Query: 358 REM-----------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
           REM                                   FD + + ++ SW  M++ Y   
Sbjct: 306 REMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMH 365

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
              ++AI LF +M+  G++PD  + + IL +C+  G+ + G
Sbjct: 366 GRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEG 406


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 191/613 (31%), Positives = 328/613 (53%), Gaps = 40/613 (6%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KNI+  N +LS Y+  G    A  +F      N  T+T MM   A   R  +AL +FR M
Sbjct: 286 KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 345

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
           + + V  D V++++VL +    GC V S                  +H   IK G +  +
Sbjct: 346 LGEGVIPDRVTVTTVLNL---PGCTVPS------------------LHPFAIKFGLDTHV 384

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            + N+LLD Y K+G + +A  +F  + ++  V++N M+ G  ++   T+A++L   M+  
Sbjct: 385 FVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRA 444

Query: 333 GFEPDEV------------TSI------NMLVACVRSGD-IKTGREMFDSMPSPSVSSWN 373
           G+    +            TS+      N L+      D +   R +FD MP     S+N
Sbjct: 445 GYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYN 504

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
            ++++Y+ ++     ++LFREMQ  G        A +LS   ++  +  GKQ+HA  +  
Sbjct: 505 VIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLL 564

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               ++ + + LI +YSKC   + A+  F    E   + W ++I G   N    EA   F
Sbjct: 565 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLF 624

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
             MR+  + P + +F++++ + + L+    GRQ+H+ + + GY + +F GS L++MY KC
Sbjct: 625 SDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC 684

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +  A + FD M  +N+++WN +I  YA  G    A+++++ M+  G  PD +TF+++L
Sbjct: 685 GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 744

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
            ACSH+GL D  ++ F+ M+  + + P  +HY C+ID LGR G F + + ++ EMP K D
Sbjct: 745 AACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKAD 804

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
           P+IW  +L SCR+H N  LA+ AA++LF ++P ++ PY +L+NIY+  G+W+D   V+++
Sbjct: 805 PIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI 864

Query: 734 MSENCIVKDPAYS 746
           M +  + K+  YS
Sbjct: 865 MRDRGVRKESGYS 877



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 232/512 (45%), Gaps = 72/512 (14%)

Query: 40  HSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNG 99
           H A+ +FD+MPHK+I+S N ILSA   S DL  A  LF   P RN  +W  ++ A    G
Sbjct: 274 HRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAG 333

Query: 100 LEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVAN 159
               ALS++  M  EG +P  +T+ +V       +        H   IK GLD +++V N
Sbjct: 334 RTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP-----SLHPFAIKFGLDTHVFVCN 388

Query: 160 ALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
            LL  Y K G    A  VF EM + + VT+ AMM G +K     +AL++F  M R   S 
Sbjct: 389 TLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSR 448

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
             + L                    Q  +  SR+     V              ++NSLL
Sbjct: 449 HPLHL-------------------LQYSHSRSRSTSVLNV-------------FVNNSLL 476

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
           D Y+K   +D    +F  +PER  VS+NV+IA Y     +   + L + M+  GF+   +
Sbjct: 477 DFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVL 536

Query: 340 TSINMLVACVRSGDIKTGREM-----------------------------------FDSM 364
               ML       D+  G+++                                   F + 
Sbjct: 537 PYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR 596

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
              S  SW A+++ Y Q+  H+EA++LF +M+  G++PDR T + I+ + +++ ++  G+
Sbjct: 597 SEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGR 656

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           Q+H+  +++      +  S L+ +Y+KC   + A R F  +PE + + WN++I+  +   
Sbjct: 657 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 716

Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
               A   F+ M      P   +F +VL++C+
Sbjct: 717 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 748



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 186/371 (50%), Gaps = 24/371 (6%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           +++  N++L    K D L+   +LFDEMPER+ VS+N +I+A   N      L ++ +M 
Sbjct: 468 NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQ 527

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             GF    +  A++   + +L DV  G++ H  ++ +GL     + NAL+ +Y+KCG   
Sbjct: 528 KLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLD 587

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A   F   SE + +++TA+++G  +  +  EAL++F  M R  +  D  + SS++    
Sbjct: 588 AAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSII---- 643

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                       ++ +  +    G+Q+H   I+ G+++ +   + L+DMYAK G +D A 
Sbjct: 644 ------------KASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 691

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
             F  +PER+ +SWN +I+ Y    ++  AI++ + M  CGF PD VT +++L AC  +G
Sbjct: 692 RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 751

Query: 353 DIKTGREMFDSMPSP-SVSSWN----AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
                 + F  M    S+S W      ++ +  +     +  K+  EM F   K D    
Sbjct: 752 LADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPF---KADPIIW 808

Query: 408 AIILSSCAAMG 418
             IL SC   G
Sbjct: 809 TSILHSCRIHG 819



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 176/418 (42%), Gaps = 68/418 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA ++  GL  +  L N LI++YSKC                              
Sbjct: 554 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGM---------------------------- 585

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A   F    E++ +SW  LI+  V+NG  E+AL +++ M   G  P   T +S+
Sbjct: 586 ---LDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSI 642

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KAS++L  +  GR+ H  +I+ G   +++  + L+ +YAKCG    A+  F+EM E N 
Sbjct: 643 IKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNS 702

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
           +++ A++S  A       A++MF  M+    + DSV+  SVL  C+  G   E    F  
Sbjct: 703 ISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHL 762

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VV 304
             +++S +   +   C                ++D   + G     + +   +P ++  +
Sbjct: 763 MKHQYSISPWKEHYAC----------------VIDTLGRVGCFSQVQKMLVEMPFKADPI 806

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML------------VACVRS- 351
            W  ++  +  +    + +  +   K  G EP + T   +L             ACV+  
Sbjct: 807 IWTSIL--HSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI 864

Query: 352 ----GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
               G  K     +  +     S  +  L+S    E   E  +L++EM  +G KPD T
Sbjct: 865 MRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDIT 922



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 137/328 (41%), Gaps = 66/328 (20%)

Query: 345 LVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN------------HK------ 386
           L + + SG +   R MFD MP  ++ S N +LS+YS S +            H+      
Sbjct: 264 LRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWT 323

Query: 387 -------------EAIKLFREMQFRGVKPDRTTLAIILS--SCAAMGILESGKQVHAASL 431
                        +A+ LFR M   GV PDR T+  +L+   C           +H  ++
Sbjct: 324 IMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-------PSLHPFAI 376

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           K       +V + L+  Y K      A RVF  + + D V +N+M+ G S   L  +A  
Sbjct: 377 KFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ 436

Query: 492 FFKQMR-----QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
            F  MR     ++ ++  Q+S +   S+                      V ++FV ++L
Sbjct: 437 LFAAMRRAGYSRHPLHLLQYSHSRSRSTS---------------------VLNVFVNNSL 475

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           ++ Y KC  +   R+ FD M  ++ V++N +I  YA N      +RL+++M   G     
Sbjct: 476 LDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQV 535

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQL 634
           + +  +L+       V +G +I   + L
Sbjct: 536 LPYATMLSVAGSLPDVHIGKQIHAQLVL 563


>gi|302788580|ref|XP_002976059.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
 gi|300156335|gb|EFJ22964.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
          Length = 699

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 213/729 (29%), Positives = 372/729 (51%), Gaps = 76/729 (10%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AGK +H  ++ +GL     + N L+ +Y KC +                           
Sbjct: 28  AGKFIHLLVIESGLLTQISVGNALVNMYGKCGS--------------------------- 60

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLA 124
               L  A ++FD M  R+V+SWN +I+A  + G  ++A+ ++  M  +G + P  +T  
Sbjct: 61  ----LALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFV 116

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +V  A      +E   R   LV + GL D ++ + NAL+++Y+KCG  K A  VFE M  
Sbjct: 117 AVVSACCDPSALEAANRIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKI 176

Query: 184 PNEVT-FTAMMSGLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESD 241
            ++V  +T M+S  A+      ALE+F+ M ++ A+  D  +L+S L  C       E  
Sbjct: 177 RDDVVLWTTMISVYAQDGYSEAALELFQQMEKEEALLPDGFTLASALAACTGPEMLEE-- 234

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                         G+++H L I+ G E++L + N+L+ MYA  G +  A   F  + +R
Sbjct: 235 --------------GREIHALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQR 280

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------VRS 351
           +VVSWN MIA Y       +A  +  +M+  G +P+ VT +  L  C          +R+
Sbjct: 281 NVVSWNAMIAAYVHHNCDKEAFRIFYQMQLEGVQPNSVTFVTFLSTCSTPAAFEDGLIRA 340

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
            +++   E  D++        NA+L +Y++     E  ++F+ M+ +  + D  T   ++
Sbjct: 341 LEVEKRVESLDALVG------NALLHTYAKLGKLDEVQRVFQRMEKQ--RDDVVTWNAVI 392

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
                 G + +G+  +A  L    ++ ++  +GL+G Y    R     ++F  + E D++
Sbjct: 393 E-----GSVRNGEFRNALELMPQKNLGSW--NGLLGAYIHVGRLADTRKLFEEMEERDVI 445

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
            WN ++       +  EA   F++M      P   ++ T+L +CA  +S  +GR+VH  I
Sbjct: 446 TWNMILGAYVERDMAKEAVRLFRRMIAEGTEPNSITWTTMLGACAGEASLAEGRRVHELI 505

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
            + G  +++FVG+AL++M+ KC  + GARQ F+ +  K+  +WN ++   AQNG  +EA+
Sbjct: 506 AERGADSELFVGNALVDMFGKCASLGGARQAFERIRAKDASSWNVLVAALAQNGDAEEAL 565

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
           + +  M   G+KP D+TF+ +  ACSH+G ++    IF S++ D+G+ P+  HY+ M D 
Sbjct: 566 KQFLRMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDL 625

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           LGRAG   EAE +I  +P   D + W  LLS+C++H +V   ++ A ++ R +P +SA  
Sbjct: 626 LGRAGFLDEAEEVIKRIPFSRDELPWMTLLSACKVHGDVERGRKVAGQVLRWNPGDSAAG 685

Query: 712 SLLANIYSS 720
             L+NI++ 
Sbjct: 686 VALSNIFAG 694



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 159/637 (24%), Positives = 275/637 (43%), Gaps = 104/637 (16%)

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G +P +++  +  K+   +  +  G+  H LVI+ GL   I V NAL+++Y KCG    A
Sbjct: 5   GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALA 64

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAR 233
             VF+ M   + +++ A+++  A+     EA+E+F+ M     +  DSV+  +V+  C  
Sbjct: 65  REVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACC- 123

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAE 292
           +   +E+                 ++  L  + G  ++D+ L N+L++MY+K G + SA 
Sbjct: 124 DPSALEA---------------ANRIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSAT 168

Query: 293 VIFSNLPER-SVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVR 350
           ++F  +  R  VV W  MI+ Y Q   S  A+EL Q+M K     PD  T  + L AC  
Sbjct: 169 MVFERMKIRDDVVLWTTMISVYAQDGYSEAALELFQQMEKEEALLPDGFTLASALAACTG 228

Query: 351 SGDIKTGREM-----------------------------------FDSMPSPSVSSWNAM 375
              ++ GRE+                                   F  M   +V SWNAM
Sbjct: 229 PEMLEEGREIHALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAM 288

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +++Y      KEA ++F +MQ  GV+P+  T    LS+C+     E G        K   
Sbjct: 289 IAAYVHHNCDKEAFRIFYQMQLEGVQPNSVTFVTFLSTCSTPAAFEDGLIRALEVEKRVE 348

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPEL--DIVCWNSMIAGLSLNSLDIEAFMFF 493
            +D  V + L+  Y+K  + +  +RVF R+ +   D+V WN++I G   N          
Sbjct: 349 SLDALVGNALLHTYAKLGKLDEVQRVFQRMEKQRDDVVTWNAVIEGSVRNG--------- 399

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
                      +F  A  L     L S                       + L+  Y   
Sbjct: 400 -----------EFRNALELMPQKNLGS----------------------WNGLLGAYIHV 426

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +   R+ F+ M  ++ +TWN ++  Y +     EAVRL++ MIA G +P+ IT+  +L
Sbjct: 427 GRLADTRKLFEEMEERDVITWNMILGAYVERDMAKEAVRLFRRMIAEGTEPNSITWTTML 486

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
            AC+    +  G  + + +  + G +  L     ++D  G+      A    + +  KD 
Sbjct: 487 GACAGEASLAEGRRV-HELIAERGADSELFVGNALVDMFGKCASLGGARQAFERIRAKDA 545

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
              W VL+++   + +   A+ A ++  R+  +   P
Sbjct: 546 SS-WNVLVAALAQNGD---AEEALKQFLRMQREGIKP 578



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 144/293 (49%), Gaps = 6/293 (2%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M   G+ PD  +    L SC  +  L +GK +H   +++       V + L+ +Y KC  
Sbjct: 1   MLLHGLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGS 60

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN-EMYPTQFSFATVLS 513
             LA  VF  +   D++ WN++I   +      EA   F+ M+++  + P   +F  V+S
Sbjct: 61  LALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVS 120

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NT 571
           +C   S+     ++ A +E+ G ++ D+ +G+AL+ MY KCG +  A   F+ M  + + 
Sbjct: 121 ACCDPSALEAANRIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDDV 180

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           V W  MI  YAQ+GY + A+ L++ M     + PD  T  + L AC+   +++ G EI +
Sbjct: 181 VLWTTMISVYAQDGYSEAALELFQQMEKEEALLPDGFTLASALAACTGPEMLEEGREI-H 239

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           ++ ++ G E  L     ++      G   +A     +M  + + V W  ++++
Sbjct: 240 ALVIERGCESELVVGNALVSMYANCGTLQDALECFQKM-AQRNVVSWNAMIAA 291


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 216/689 (31%), Positives = 348/689 (50%), Gaps = 97/689 (14%)

Query: 118 PTHITLASVFKASTALL----DVEHGR----RCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           P  ++L+++ +  T LL    +  +GR      H  VIK GL  ++Y+ N L+++Y+K G
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLS--- 225
           +  HA  +F+EM      ++  ++S  AK   +  + E F RL  R +VS  ++ +    
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123

Query: 226 --------SVLGVCAREGCGVESDVFAQSDNKFSRNVH-----GQQVHCLTIKLGFEADL 272
                    ++G   REG  +E   F  ++   S         G++VH   +KLG   ++
Sbjct: 124 IGQYHKAIRIMGEMMREG--IEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNV 181

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            +SNSLL+MYAK GD   A+V+F  +  + + SWN MIA + Q                 
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQ----------------- 224

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                              G +      F+ M    + +WN+M+S Y+Q      A+ +F
Sbjct: 225 ------------------VGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMF 266

Query: 393 REM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
            +M +   + PDR TLA +LS+CA +  L  G+Q+H+  + T   I   V + LI +YS+
Sbjct: 267 SKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSR 326

Query: 452 CQRNELAER---------------------------------VFHRIPELDIVCWNSMIA 478
           C   E A R                                 +F  + + D+V W +MI 
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIV 386

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G   + L  EA   F+ M   E  P  ++ A +LS  + L+S   G+Q+H    K G + 
Sbjct: 387 GYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIY 446

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMH-GKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
            + V +ALI MY K G I  A + FD++   ++TV+W  MI   AQ+G+ +EA+ L++ M
Sbjct: 447 SVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           +  G++PD IT+V + +AC+H+GLV+ G + F+ M+    + P L HY CM+D  GRAG 
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGL 566

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
             EA+  I++MP + D V W  LLS+CR++ N+ L K AAE L  L+P+NS  YS LAN+
Sbjct: 567 LQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANL 626

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           YS+ G+W++   +R+ M +  + K+  +S
Sbjct: 627 YSACGKWEEAAKIRKSMKDGRVKKEQGFS 655



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 166/628 (26%), Positives = 284/628 (45%), Gaps = 105/628 (16%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
             +L+H  ++++GL    +L N L+ +YSK      A+ LFD+MP +  +SWN +LSA  
Sbjct: 32  TAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYA 91

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K  D++ + + FD +P+R+ VSW  +I      G   KA+ +  +M  EG  P+  TL +
Sbjct: 92  KRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTN 151

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------------- 169
           V  +  A   +E G++ H  ++K+GL  N+ V+N+LL++YAKCG                
Sbjct: 152 VLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKD 211

Query: 170 ---WTKH------------AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              W               A+  FE+M+E + VT+ +M+SG  +    + AL+MF  M+R
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLR 271

Query: 215 KA-VSIDSVSLSSVLGVCAR----------------EGCGVESDVFAQSDNKFSRNVHGQ 257
            + +S D  +L+SVL  CA                  G  +   V     + +SR    +
Sbjct: 272 DSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331

Query: 258 QVHCLTIKLGFEADLHLS--NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
               L  + G + DL +    +LLD Y K GDM+ A+ IF +L +R VV+W  MI GY Q
Sbjct: 332 TARRLIEQRGTK-DLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQ 390

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS------MPSPSV 369
                +AI L + M      P+  T   ML        +  G+++  S      + S SV
Sbjct: 391 HGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSV 450

Query: 370 S------------------------------SWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           S                              SW +M+ + +Q  + +EA++LF  M   G
Sbjct: 451 SNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQRNEL 457
           ++PD  T   + S+C   G++  G+Q +   +K    I   ++  + ++ ++ +    + 
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQ-YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569

Query: 458 AERVFHRIP-ELDIVCWNSMIAG------LSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           A+    ++P E D+V W S+++       + L  +  E  +      + E      + A 
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLL----EPENSGAYSALAN 625

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           + S+C K   + + R+      KDG V 
Sbjct: 626 LYSACGKWEEAAKIRKSM----KDGRVK 649


>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
          Length = 811

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 231/779 (29%), Positives = 371/779 (47%), Gaps = 116/779 (14%)

Query: 6   AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            GK +HA IL+NG F   + ++  +L+  Y+KC                           
Sbjct: 68  TGKQIHARILKNGDFYARNEYIETKLVIFYAKC--------------------------- 100

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
               D LE A  +F ++  RNV SW  +I    R GL E AL  + +M      P +  +
Sbjct: 101 ----DALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 156

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +V KA  AL     GR  HG VIK GL+  ++VA++L  +Y KCG    A  VF+E+ E
Sbjct: 157 PNVCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPE 216

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V + A+M G  +     EA+ +F  M ++ V    V++S+ L   A    GVE    
Sbjct: 217 RNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANM-VGVE---- 271

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q H + I  G E D  L  SLL+ Y K G ++ AE++F  + ++ V
Sbjct: 272 -----------EGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMFDKDV 320

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           V+WN++I+GY Q+     AI + Q M+    + D VT   ++ A  R+ ++K G+E+   
Sbjct: 321 VTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCY 380

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           FDS     +  WN +L++Y+QS    EA
Sbjct: 381 CIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQSGLSGEA 440

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           ++LF EMQ   V P+  T  +I+ S    G +   K+                      +
Sbjct: 441 LRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKE----------------------M 478

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           + + Q + ++          +++ W +M+ G+  N    EA +F ++M+++ + P  FS 
Sbjct: 479 FLQMQSSGISP---------NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 529

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              LS+ A L+S   GR +H  I ++  + + + + ++L++MY KCGDI  A + F    
Sbjct: 530 TVALSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGSKL 589

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
                 +N MI  YA  G   EA+ LY+ +   G+KPD +TF ++L+AC+H+G +D  V 
Sbjct: 590 YSELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVG 649

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           +F +M L HG+ P L+HY  M+D L  AG   +A  LI+EMP K D  + + L++SC   
Sbjct: 650 VFTAMVLKHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEMPYKPDARMIQSLVASCNKQ 709

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
               L +  +  L   +P+NS  Y  ++N Y+  G WD++  +RE+M    + K P  S
Sbjct: 710 HKTELVEYLSRHLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCS 768



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 153/646 (23%), Positives = 283/646 (43%), Gaps = 89/646 (13%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S+ + +S+L +NG  ++ALS+  +M                +      D+  G++ H  +
Sbjct: 17  SYFHRVSSLCKNGEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLSTGKQIHARI 76

Query: 147 IKIG--LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
           +K G    +N Y+   L+  YAKC   + A  +F ++   N  ++ A++    +      
Sbjct: 77  LKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEG 136

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           AL  F  M+   +  D+  + +V   C            A   ++F R VHG       I
Sbjct: 137 ALMGFVEMLENEIFPDNFVVPNVCKACG-----------ALQWSRFGRGVHG-----YVI 180

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           K G E  + +++SL DMY K G +D A  +F  +PER+VV+WN ++ GY Q   + +AI 
Sbjct: 181 KAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIR 240

Query: 325 LLQRMKSCGFEPDEVT-------SINML----------VACV------------------ 349
           L   M+  G EP  VT       S NM+          +A V                  
Sbjct: 241 LFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYC 300

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           + G I+    +FD M    V +WN ++S Y Q    ++AI + + M+   +K D  TL+ 
Sbjct: 301 KVGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLST 360

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           ++S+ A    L+ GK+V    ++ +   D  +AS  + +Y+KC     A++VF    E D
Sbjct: 361 LMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKD 420

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           ++ WN+++A  + + L  EA   F +M+   + P   ++  ++ S  +     + +++  
Sbjct: 421 LILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFL 480

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
           Q++  G                                  N ++W  M++G  QNG  +E
Sbjct: 481 QMQSSGI-------------------------------SPNLISWTTMMNGMVQNGCSEE 509

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM--QLDHGVEPILDHYTC 647
           A+   + M  SG++P+  +    L+A ++   +  G  I   +   L H     ++  T 
Sbjct: 510 AILFLRKMQESGLRPNAFSITVALSASANLASLHFGRSIHGYIIRNLRHSSSVSIE--TS 567

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
           ++D   + G  ++AE +       + P ++  ++S+  L+ NV+ A
Sbjct: 568 LVDMYAKCGDINKAERVFGSKLYSELP-LYNAMISAYALYGNVKEA 612



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 187/379 (49%), Gaps = 16/379 (4%)

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           D    PS +S+   +SS  ++   KEA+ L  EM FR  +         L  C     L 
Sbjct: 8   DQALPPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLS 67

Query: 422 SGKQVHAASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           +GKQ+HA  LK       + Y+ + L+  Y+KC   E AE +F ++   ++  W ++I  
Sbjct: 68  TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIGV 127

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
                L   A M F +M +NE++P  F    V  +C  L  S  GR VH  + K G  + 
Sbjct: 128 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDC 187

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           +FV S+L +MY KCG +  AR+ FD +  +N V WN ++ GY QNG  +EA+RL+ DM  
Sbjct: 188 VFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRK 247

Query: 600 SGVKPDDITFVAILTACSHSGLVDVG-----VEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
            GV+P  +T    L+A ++   V+ G     + I N ++LD+ +   L ++ C      +
Sbjct: 248 EGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYC------K 301

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
            G    AEM+ D M  K D V W +L+S       V  A   + +L RL+ K       L
Sbjct: 302 VGLIEYAEMVFDRMFDK-DVVTWNLLISGYVQQGLVEDAIYMS-QLMRLE-KLKYDCVTL 358

Query: 715 ANIYSSLGRWDDLRAVREL 733
           + + S+  R ++L+  +E+
Sbjct: 359 STLMSAAARTENLKFGKEV 377


>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Brachypodium distachyon]
          Length = 678

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 199/644 (30%), Positives = 322/644 (50%), Gaps = 54/644 (8%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           R  H  ++  GL + +     LLS YA  G    A  V +E   P+  T+   +   A  
Sbjct: 45  RALHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAA 104

Query: 200 DRVVEALEMFRLMIRK--AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
            R  EA+ + R M R+  A   D V LS  L    R                F    +G+
Sbjct: 105 GRHAEAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRSA-------------DFG---YGR 148

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           ++HC  +K G   DL + N+L+DMYAK GD+ +A  +F  +P+R+VVSW  M++G  Q  
Sbjct: 149 RLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNG 207

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------------------- 348
            + + + L   M+     P E T  ++L+AC                             
Sbjct: 208 LAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITA 267

Query: 349 ------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                 V+ G+ +  R++FD +    +  W  M+  Y+Q+ +  +A+ LF + +F  + P
Sbjct: 268 AMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVP 327

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           +  T+A +LS+ A +  L  G+ +H  S+K  +  ++ V + L+ +Y+KC+    A+ +F
Sbjct: 328 NSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIF 387

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
            R+   D+V WNS+IAG + N +  +A M F  MR     P   S    LS+C  L    
Sbjct: 388 GRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLL 447

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G+  H    K  ++++I+V +AL+ +Y KC D+  A++ F  M+ +NTVTW  MI GY 
Sbjct: 448 IGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYG 507

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
             G    ++ L+ +M+   ++P++  F +IL+ CSH+G+V VG + F SM     + P +
Sbjct: 508 MQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSM 567

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
            HY CM+D L RAG+  EA   I +MP + D  IW+  L  C+LH+ +  A+ A   +  
Sbjct: 568 KHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMV 627

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L P       +++N+Y+S GRWD   A+R+LM E  +VK P  S
Sbjct: 628 LHPDTPDFCVMMSNLYTSYGRWDKSLAIRKLMKERGLVKLPGCS 671



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 230/474 (48%), Gaps = 63/474 (13%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D++  N ++    K  DL+ A K+FD +P+RNVVSW +++S  ++NGL ++ L ++N+M 
Sbjct: 161 DLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMR 220

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            E  +P+  T+ASV  A T L  +  GR  HG V+K GL  N ++  A+L +Y KCG  +
Sbjct: 221 QESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAE 280

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF+E+S  + V +T M+ G  +    ++AL +F       +  +SV++++VL   A
Sbjct: 281 DARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASA 340

Query: 233 REGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           +                  RN+  G+ +H +++KLG   +  + N+L+DMYAK   +  A
Sbjct: 341 QL-----------------RNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDA 383

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
           + IF  +  + VV+WN +IAGY +    + A+ L   M+  G  PD ++ +N L ACV  
Sbjct: 384 KGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCL 443

Query: 352 GDIKTGR-----------------------------------EMFDSMPSPSVSSWNAML 376
           GD+  G+                                    +F  M   +  +W AM+
Sbjct: 444 GDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMI 503

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
             Y    +   +I LF EM    ++P+      ILS+C+  G++  GK+      ++ +H
Sbjct: 504 GGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKC----FESMAH 559

Query: 437 IDNYVAS-----GLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS 484
             N   S      ++ + ++    E A     ++P + D   W + + G  L+S
Sbjct: 560 YFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHS 613



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 148/631 (23%), Positives = 278/631 (44%), Gaps = 100/631 (15%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + LHA +L +GL        +L+  Y+   +  SA+ + D+ PH D              
Sbjct: 45  RALHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPD-------------- 90

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH----ITL 123
               + YK+         + W+         G   +A++V+  M      P      + L
Sbjct: 91  ---AYTYKV--------ALGWH------AAAGRHAEAVAVHRDMRRR--CPAEQEDVVVL 131

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +   KA+    D  +GRR H  V+K G   +++V N L+ +YAK G  K+A  VF+ + +
Sbjct: 132 SLALKAAVRSADFGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPD 190

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V++T+M+SG  +     E L +F  M ++++     +++SVL  C   G        
Sbjct: 191 RNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLG-------- 242

Query: 244 AQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                    ++H G+ +H   +K G  ++  ++ ++LDMY K G+ + A  +F  L    
Sbjct: 243 ---------SLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVD 293

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--- 359
           +V W  MI GY Q      A+ L    K     P+ VT   +L A  +  ++  GR    
Sbjct: 294 LVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHG 353

Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                           +F  + +  V +WN++++ Y++++   +
Sbjct: 354 ISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSD 413

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+ LF  M+ +G  PD  ++   LS+C  +G L  GK  H  ++K A   + YV + L+ 
Sbjct: 414 ALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLN 473

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+KC     A+RVF  + + + V W +MI G  +      +   F +M ++ + P +  
Sbjct: 474 LYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAV 533

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVN---DIFVGSALIEMYCKCGDIYGARQFFD 564
           F ++LS+C+       G++    +    Y N    +   + ++++  + G++  A +F  
Sbjct: 534 FTSILSTCSHTGMVTVGKKCFESMAH--YFNITPSMKHYACMVDVLARAGNLEEALEFIQ 591

Query: 565 MMHGK-NTVTWNEMIHG---YAQNGYGDEAV 591
            M  + +T  W   +HG   +++  + +EAV
Sbjct: 592 KMPMQADTSIWQAFLHGCKLHSRLEFAEEAV 622



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 195/398 (48%), Gaps = 52/398 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+H  ++++GL  + F+   ++++Y KC                              
Sbjct: 247 GRLIHGSVMKHGLVSNHFITAAMLDMYVKCG----------------------------- 277

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             + E A ++FDE+   ++V W  +I    +NG    AL ++        VP  +T+A+V
Sbjct: 278 --EAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATV 335

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             AS  L ++  GR  HG+ +K+G  +N  V NAL+ +YAKC     A  +F  +   + 
Sbjct: 336 LSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDV 395

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+ ++++G A+ D   +AL +F  M  +    D++S+ + L  C   G     D+    
Sbjct: 396 VTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLG-----DLLI-- 448

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+  H   +K  F ++++++ +LL++Y K  D+ SA+ +FS + +R+ V+W
Sbjct: 449 ---------GKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTW 499

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             MI GYG +  S  +I+L   M     +P+E    ++L  C  +G +  G++ F+SM  
Sbjct: 500 GAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAH 559

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
               +PS+  +  M+   +++ N +EA++  ++M  + 
Sbjct: 560 YFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQA 597



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 137/325 (42%), Gaps = 49/325 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   ++ G  ++  + N L+++Y+KC     A+ +F ++ +KD+ +WN+       
Sbjct: 348 GRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNS------- 400

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LI+    N +   AL +++ M  +G +P  I++ + 
Sbjct: 401 ------------------------LIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNA 436

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L D+  G+  H   +K     NIYV  ALL+LY KC     A  VF EM++ N 
Sbjct: 437 LSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNT 496

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFAQ 245
           VT+ AM+ G         ++++F  M++  +  +    +S+L  C+  G   V    F  
Sbjct: 497 VTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFES 556

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
             + F+     +   C                ++D+ A+ G+++ A      +P ++  S
Sbjct: 557 MAHYFNITPSMKHYAC----------------MVDVLARAGNLEEALEFIQKMPMQADTS 600

Query: 306 -WNVMIAGYGQKYQSTKAIELLQRM 329
            W   + G     +   A E + RM
Sbjct: 601 IWQAFLHGCKLHSRLEFAEEAVNRM 625



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 17/291 (5%)

Query: 398 RGVKPDRTTLA-IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
           R   PD   L   +L +C     L S + +HA  L           + L+  Y+      
Sbjct: 21  RASSPDANPLLHRLLPACTT---LPSLRALHARLLAHGLLRGLRAHTKLLSCYAALGDLA 77

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS--- 513
            A RV    P  D   +   +   +      EA    + MR+    P +     VLS   
Sbjct: 78  SARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRRR--CPAEQEDVVVLSLAL 135

Query: 514 SCAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
             A  S+ F  GR++H  + K G   D+FV + L++MY K GD+  AR+ FD +  +N V
Sbjct: 136 KAAVRSADFGYGRRLHCDVVKAGG-GDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVV 194

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +W  M+ G  QNG   E + L+ +M    + P + T  ++L AC+  G +  G  I  S+
Sbjct: 195 SWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSV 254

Query: 633 QLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            + HG+  + +H+    M+D   + G   +A  + DE+    D V+W  ++
Sbjct: 255 -MKHGL--VSNHFITAAMLDMYVKCGEAEDARQVFDELSFV-DLVLWTTMI 301


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 204/702 (29%), Positives = 338/702 (48%), Gaps = 92/702 (13%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P ++T  +V  + ++  DV  GR  H  +     +++  V NAL+S+Y KC     A  V
Sbjct: 5   PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 178 FEEMS--EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           FE M   + N V++ AM++  A+     EAL ++  M  + +  D V+  SVLG C    
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---- 120

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                          S    G+++H      G ++   L+N+L+ MYA+ G +  A+ +F
Sbjct: 121 ---------------SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMF 165

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN------------ 343
            +L  R   SWN +I  + Q    + A+ + + MK C  +P+  T IN            
Sbjct: 166 QSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLP 224

Query: 344 -----------------MLVACV------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                            ++VA        + G     RE+FD M    + SWN M+  Y 
Sbjct: 225 EGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYV 284

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           Q+ +  EA++L++++   G K  + T   IL +C+++  L  G+ VH+  L+     +  
Sbjct: 285 QNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVA 344

Query: 441 VASGLIGIYSKCQRNELAERVFH----------------------------------RIP 466
           VA+ L+ +Y+KC   E A +VF+                                  R+ 
Sbjct: 345 VATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLG 404

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLSSSFQGR 525
             D +CWN+MI     N   + A   F++M     + P   +F  VL +CA L    + +
Sbjct: 405 SRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVK 464

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
            +HAQI +    +++ V + LI MY +CG +  A + F     K  V+W  M+  ++Q G
Sbjct: 465 ALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYG 524

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
              EA+ L+++M   GVKPDD+T+ +IL  C+H G ++ G   F  M   HG+ P  DH+
Sbjct: 525 RYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHF 584

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
             M+D LGR+G   +A+ L++ MP + DPV W   L++CR+H  + L + AAE ++ LDP
Sbjct: 585 AAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDP 644

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            ++APY  ++NIY++ G W+ + +VR+ M E  + K P  S 
Sbjct: 645 SSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSF 686



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 166/690 (24%), Positives = 291/690 (42%), Gaps = 154/690 (22%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  I  +    DT + N LI +Y KC++   A+ +F+ M       W         
Sbjct: 26  GRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM------DWR-------- 71

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                          +RNVVSWN +I+A  +NG   +AL +Y +M+ +G    H+T  SV
Sbjct: 72  ---------------QRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSV 116

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++L     GR  H  V   GLD    +ANAL+++YA+ G    A  +F+ +   +E
Sbjct: 117 LGACSSL---AQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDE 173

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++ A++   +++     AL +F+ M        +  ++ + G    E       V  + 
Sbjct: 174 TSWNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPE-------VLPE- 225

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+++H   +  GF++DL ++ +L++MY K G    A  +F  + +R +VSW
Sbjct: 226 ---------GRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSW 276

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           NVMI  Y Q     +A+EL Q++   GF+  + T +++L AC                  
Sbjct: 277 NVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILE 336

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSW------------------- 372
                             + G ++  R++F++M +    +W                   
Sbjct: 337 RGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKA 396

Query: 373 ---------------NAMLSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLAIILSSCAA 416
                          NAM+++Y Q+     A+K+FREM    G+KPD  T   +L +CA+
Sbjct: 397 RKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACAS 456

Query: 417 MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
           +G L   K +HA   ++    +  V + LI +Y++C   E AER+F    E  +V W +M
Sbjct: 457 LGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAM 516

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHAQIEKDG 535
           +A  S      EA   F++M    + P   ++ ++L  C    S  QG R      E  G
Sbjct: 517 VAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHG 576

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
                   +A++++  + G ++ A++  + M                             
Sbjct: 577 LAPTADHFAAMVDLLGRSGRLFDAKELLESMP---------------------------- 608

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVG 625
                  +PD + ++  LTAC   G +++G
Sbjct: 609 ------FEPDPVAWMTFLTACRIHGKLELG 632



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 233/515 (45%), Gaps = 103/515 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA I+ NG   D  +   LI +Y KC ++H A+ +FDK                  
Sbjct: 226 GRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDK------------------ 267

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        M +R++VSWN +I   V+NG   +AL +Y K+  EGF  T  T  S+
Sbjct: 268 -------------MKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSI 314

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG----------------- 169
             A +++  +  GR  H  +++ GLD  + VA AL+++YAKCG                 
Sbjct: 315 LGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDA 374

Query: 170 --WT---------------KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
             W+               + A  VF+ +   + + + AM++   +    V A+++FR M
Sbjct: 375 VAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREM 434

Query: 213 IRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
              A +  D+V+  +VL  CA  G                R    + +H    +   E++
Sbjct: 435 TGAAGLKPDAVTFIAVLEACASLG----------------RLSEVKALHAQISESELESN 478

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + ++N+L++MYA+ G ++ AE +F+   E++VVSW  M+A + Q  +  +A++L Q M  
Sbjct: 479 VVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDL 538

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHK 386
            G +PD+VT  ++L  C   G ++ G   F  M      +P+   + AM+    +S    
Sbjct: 539 EGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLF 598

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT----ASHIDNYVA 442
           +A +L   M F   +PD       L++C   G LE G+   AA+ +      S    Y+A
Sbjct: 599 DAKELLESMPF---EPDPVAWMTFLTACRIHGKLELGE---AAAERVYELDPSSTAPYIA 652

Query: 443 SGLI----GIYSKCQ--RNELAERVFHRIPELDIV 471
              I    G++ K    R ++ ER   ++P L  +
Sbjct: 653 MSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFI 687



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 191/409 (46%), Gaps = 60/409 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+L+H+HIL  GL  +  +   L+ +Y+KC +   A+ +F+ M ++D  +W+ ++
Sbjct: 322 KALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLI 381

Query: 62  SAQCKS---DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFV 117
            A   +    D   A K+FD +  R+ + WN +I+  V+NG    A+ ++ +M+   G  
Sbjct: 382 GAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLK 441

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  +T  +V +A  +L  +   +  H  + +  L+ N+ V N L+++YA+CG  + A  +
Sbjct: 442 PDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERL 501

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F    E   V++TAM++  ++  R  EAL++F+ M  + V  D V+ +S+L VC   G  
Sbjct: 502 FAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGS- 560

Query: 238 VESDVFAQSDNKFS--RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                  Q    F+    +HG         L   AD H + +++D+  ++G +  A+ + 
Sbjct: 561 -----LEQGWRYFTDMAELHG---------LAPTAD-HFA-AMVDLLGRSGRLFDAKELL 604

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
            ++P                                  FEPD V  +  L AC   G ++
Sbjct: 605 ESMP----------------------------------FEPDPVAWMTFLTACRIHGKLE 630

Query: 356 TGR---EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
            G    E    +   S + + AM + Y+     ++   + ++M+ RG+K
Sbjct: 631 LGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLK 679



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 147/283 (51%), Gaps = 8/283 (2%)

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           +PD  T   +L SC++ G +  G+ +H     +    D  V + LI +Y KC     A  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 461 VFHRIP--ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
           VF  +   + ++V WN+MIA  + N    EA + + +M    +     +F +VL +C+ L
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           +   QGR++H ++   G  +   + +AL+ MY + G +  A++ F  +  ++  +WN +I
Sbjct: 124 A---QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
             ++Q+G    A+R++K+M    +KP+  T++ +++  S   ++  G +I   + + +G 
Sbjct: 181 LAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEI-VANGF 238

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           +  L   T +I+  G+ G  HEA  + D+M  K D V W V++
Sbjct: 239 DSDLVVATALINMYGKCGSSHEAREVFDKMK-KRDMVSWNVMI 280


>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 729

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 207/685 (30%), Positives = 348/685 (50%), Gaps = 54/685 (7%)

Query: 90  NLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEH--------GRR 141
           +L  +L +N     AL ++ ++      P   T + + KA  +     H         R+
Sbjct: 19  SLFHSLFQNA-TSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQ 77

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
                +K G+++ I+V  +L+ LY K G+T HA  +F++MS  + V++  ++ G ++   
Sbjct: 78  IQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGY 137

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
           +  A+++F  M+R+    +  ++ S+L  C   GC             F     G+ +H 
Sbjct: 138 LYHAIQLFVDMLRENFKPNQTTIVSLLPSC---GC-------------FELIFQGRSIHG 181

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
             IK GF  D HL+N+L+ MYAK  D+++++++F  + E+SVVSWN MI  YGQ     K
Sbjct: 182 FGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDK 241

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVA---------------------------CV--RSG 352
           AI   + M   GF P  VT +N++ A                           C+  + G
Sbjct: 242 AILYFKEMLKEGFHPSSVTIMNLVSANAFPENVHCYVVKCGFTNDASVVTSLVCLYAKQG 301

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
              T ++++   P+  + +  A++SSYS+  + + A++ F +     +KPD   L  +L 
Sbjct: 302 FTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLH 361

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
                     G   H   +K+    D  VA+GLI +YS+    E A  +F+ + E  ++ 
Sbjct: 362 GITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLIT 421

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           WNSMI+G        +A   F +M      P   + A++LS C +L +   G  +H+ I 
Sbjct: 422 WNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYIL 481

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVR 592
           ++    + F+G+ALI+MY KCG +  A + F  +      TWN +I GY+  G    A  
Sbjct: 482 RNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFG 541

Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
            Y  +   G+KPD ITF+ +L AC+H GLV +G+E FN M  ++G+ P L HY C++  L
Sbjct: 542 CYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALL 601

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYS 712
           G+ G F EA   I++M  + D  +W  LL++C +   V+L +  A++LF L+ KN   Y 
Sbjct: 602 GKEGLFKEAIEFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYV 661

Query: 713 LLANIYSSLGRWDDLRAVRELMSEN 737
           L++N+Y+ +GRWDD+  VRE+M ++
Sbjct: 662 LMSNLYAIVGRWDDVARVREMMKDS 686



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 235/479 (49%), Gaps = 57/479 (11%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A  +FD+M  R+VVSWN LI    +NG    A+ ++  M  E F P   T+ S+  +   
Sbjct: 110 ARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGC 169

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
              +  GR  HG  IK G   + ++ NAL+S+YAKC   + +  +F+EM E + V++  M
Sbjct: 170 FELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTM 229

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           +    +     +A+  F+ M+++     SV++ +++                 S N F  
Sbjct: 230 IGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLV-----------------SANAFPE 272

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
           N     VHC  +K GF  D  +  SL+ +YAK G  ++A+ ++   P + +++   +I+ 
Sbjct: 273 N-----VHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISS 327

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINML----------VAC------VRSG---- 352
           Y +K     A+E   +      +PD V  I +L          + C      V+SG    
Sbjct: 328 YSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSND 387

Query: 353 ---------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                          +I+    +F  M    + +WN+M+S   Q+    +A++LF EM  
Sbjct: 388 CLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSM 447

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
            G KPD  T+A +LS C  +G L  G+ +H+  L+    +++++ + LI +YSKC R + 
Sbjct: 448 CGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDY 507

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
           AE+VF+ I +  +  WN++I+G SL  L+  AF  + ++++  + P + +F  VL++C 
Sbjct: 508 AEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACT 566



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 210/452 (46%), Gaps = 88/452 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   ++ G   D+ L N L+ +Y+KC++  ++Q LFD+M  K + SW         
Sbjct: 176 GRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSW--------- 226

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                 N +I    +NGL +KA+  + +M  EGF P+ +T+ ++
Sbjct: 227 ----------------------NTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNL 264

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A+    +V      H  V+K G   +  V  +L+ LYAK G+T  A  +++     + 
Sbjct: 265 VSANAFPENV------HCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDL 318

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T TA++S  ++   +  A+E F   I+  +  D+V+L  VL        G+ +      
Sbjct: 319 ITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLH-------GITNP----- 366

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S    G   H   +K G   D  ++N L+ +Y++  ++++A  +F ++ E+ +++W
Sbjct: 367 ----SHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITW 422

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG--------- 357
           N MI+G  Q  +S+ A+EL   M  CG +PD +T  ++L  C + G+++ G         
Sbjct: 423 NSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILR 482

Query: 358 --------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                      ++F ++  P +++WNA++S YS       A   
Sbjct: 483 NNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGC 542

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           + ++Q +G+KPD+ T   +L++C   G++  G
Sbjct: 543 YSKLQEQGLKPDKITFLGVLAACTHGGLVYLG 574


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 226/723 (31%), Positives = 349/723 (48%), Gaps = 93/723 (12%)

Query: 116 FVPTHIT--LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
            +P  +T  LA   ++  +   +   R  HG ++ +GL   +++ N LL  Y  CG    
Sbjct: 14  LLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSD 73

Query: 174 AVPVFE-EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI------DSVSLSS 226
           A  +   ++ EPN +T   MM+G AK   + +A E+F  M R+ V+       D+   + 
Sbjct: 74  ARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAG 133

Query: 227 VLGVCAREGCGVES----DVFAQSDNKFSRNVHGQQVHCLTIKLGF------------EA 270
               C   GC   +     +F + D     +V    V  + ++ G+              
Sbjct: 134 SWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVD-MFVRCGYVDFASRLFSQIERP 192

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
            +   NS+L  YAK   +D A   F ++ ER VVSWN+MIA   Q  +  +A+ L+  M 
Sbjct: 193 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH 252

Query: 331 SCGFEPDEVTSINMLVACVR-----------------------------------SGDIK 355
             G   D  T  + L AC R                                    G  K
Sbjct: 253 RKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFK 312

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
             + +F+S+   +  SW  ++    Q E   ++++LF +M+   +  D+  LA ++S C 
Sbjct: 313 EAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCF 372

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
               L  G+Q+H+  LK+  +    V++ LI +Y+KC   + AE VF  + E DIV W S
Sbjct: 373 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTS 432

Query: 476 MIAGLSLNSLDIEAFMFFKQM--------------------------------RQNEMYP 503
           MI   S     I+A  FF  M                                 Q ++ P
Sbjct: 433 MITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 492

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              ++ T+   CA + ++  G Q+     K G + ++ V +A I MY KCG I  A++ F
Sbjct: 493 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 552

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D+++GK+ V+WN MI GY+Q+G G +A + + DM++ G KPD I++VA+L+ CSHSGLV 
Sbjct: 553 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 612

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G   F+ M   HG+ P L+H++CM+D LGRAGH  EA+ LID+MP K    +W  LLS+
Sbjct: 613 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 672

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           C++H N  LA+ AA+ +F LD  +S  Y LLA IYS  G+ DD   VR+LM +  I K+P
Sbjct: 673 CKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNP 732

Query: 744 AYS 746
            YS
Sbjct: 733 GYS 735



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 168/617 (27%), Positives = 292/617 (47%), Gaps = 62/617 (10%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSW 88
           L++++ +C     A  LF ++    I+  N++L+   K   ++ A + F++M ER+VVSW
Sbjct: 169 LVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSW 228

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           N +I+AL ++G   +AL +  +M  +G      T  S   A   L  +  G++ H  VI+
Sbjct: 229 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 288

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
                + YVA+AL+ LYAKCG  K A  VF  + + N V++T ++ G  + +   +++E+
Sbjct: 289 SLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVEL 348

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
           F  M  + ++ID  +L++++      GC    D+             G+Q+H L +K G 
Sbjct: 349 FNQMRAELMAIDQFALATLI-----SGCFNRMDL-----------CLGRQLHSLCLKSGH 392

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
              + +SNSL+ +YAK GD+ +AE +FS++ ER +VSW  MI  Y Q             
Sbjct: 393 NRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQ------------- 439

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                  G+I   RE FD M + +  +WNAML +Y Q    ++ 
Sbjct: 440 ----------------------IGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDG 477

Query: 389 IKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           +K++  M   + V PD  T   +   CA +G  + G Q+   ++K    ++  VA+  I 
Sbjct: 478 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAIT 537

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +YSKC R   A+++F  +   D+V WN+MI G S + +  +A   F  M      P   S
Sbjct: 538 MYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYIS 597

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG----SALIEMYCKCGDIYGARQFF 563
           +  VLS C+      +G+     + +   V+ I  G    S ++++  + G +  A+   
Sbjct: 598 YVAVLSGCSHSGLVQEGKLYFDMMTR---VHGISPGLEHFSCMVDLLGRAGHLTEAKDLI 654

Query: 564 DMMHGKNTV-TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           D M  K T   W  ++     +G  DE   L    +     PD  +++ +    S +G  
Sbjct: 655 DKMPMKPTAEVWGALLSACKIHG-NDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKS 713

Query: 623 DVGVEIFNSMQLDHGVE 639
           D   ++   M+ D G++
Sbjct: 714 DDSAQVRKLMR-DKGIK 729



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 206/433 (47%), Gaps = 55/433 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA ++R+    D ++ + LIELY+KC +   A+ +F+ +  ++  SW  ++    +
Sbjct: 279 GKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 338

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  Y+ F                         K++ ++N+M  E        LA++
Sbjct: 339 -------YECF------------------------SKSVELFNQMRAELMAIDQFALATL 367

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                  +D+  GR+ H L +K G ++ I V+N+L+SLYAKCG  ++A  VF  MSE + 
Sbjct: 368 ISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDI 427

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           V++T+M++  ++   +++A E F  M  R A++ +++  + +      +G  + S + +Q
Sbjct: 428 VSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 487

Query: 246 SD---------------NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
            D                    N  G Q+   T+K G   ++ ++N+ + MY+K G +  
Sbjct: 488 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 547

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A+ +F  L  + VVSWN MI GY Q     +A +    M S G +PD ++ + +L  C  
Sbjct: 548 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 607

Query: 351 SGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           SG ++ G+  FD M      SP +  ++ M+    ++ +  EA  L  +M    +KP   
Sbjct: 608 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP---MKPTAE 664

Query: 406 TLAIILSSCAAMG 418
               +LS+C   G
Sbjct: 665 VWGALLSACKIHG 677



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 5/121 (4%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A+  G  +  H ++ GL  +  + N  I +YSKC     AQ LFD +  KD+ SWNA+++
Sbjct: 509 ANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 568

Query: 63  AQCKSDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFV 117
              +    + A K FD+M  +    + +S+  ++S    +GL ++    ++ M+   G  
Sbjct: 569 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGIS 628

Query: 118 P 118
           P
Sbjct: 629 P 629


>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 211/644 (32%), Positives = 330/644 (51%), Gaps = 59/644 (9%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKC--GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           H   IK+G   +IY  N +LS Y +C  G    A  +F+EMS  + VT+  M+SG   + 
Sbjct: 22  HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSG 81

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
            +  A E+++ M    +  D+ +  S+L   A   C    DV             GQQVH
Sbjct: 82  SLGSAWELYKSMKSFGLMPDAYTFGSILKGVA---CACRLDV-------------GQQVH 125

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            L +K+G+E  ++  ++LLDMYAK   +  A ++F  +P R+ VSWN +IAG+  +    
Sbjct: 126 SLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHD 185

Query: 321 KAIELLQRMKSCGFEPDEVT--------------SINMLVAC------------------ 348
            A  LL+ M+  G   D+ T               + M + C                  
Sbjct: 186 TAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATI 245

Query: 349 ---VRSGDIKTGREMFD-SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
               + G ++    +FD ++ S  + +WN+ML+++   +  + A KLF +MQ  G +PD 
Sbjct: 246 TSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDI 305

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL--AERVF 462
            T   I+S+C+     ++GK +H   +K        + + +I +Y +   N +  A  VF
Sbjct: 306 YTYTTIISACSHK---DNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVF 362

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
           H +   D V WNS++ G S       A   F  MR   +    ++F+ VL SC+ L++  
Sbjct: 363 HSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQ 422

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G+Q+H    K G+ ++ FV S+LI MY KCG I  AR+ F+     +++TWN ++  YA
Sbjct: 423 LGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYA 482

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           Q+G GD A+ L+  M    VK D ITFVA LTACSH GLV+ G  +  SM  D+G+ P +
Sbjct: 483 QHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRM 542

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           +HY C +D  GRAG+  EA+ LI+ MP   D ++W+ LL +CR   ++ LA + A  L  
Sbjct: 543 EHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLE 602

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L+P+    Y +L+N+Y  L RWD+   +  LM E  + K P +S
Sbjct: 603 LEPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWS 646



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 167/613 (27%), Positives = 282/613 (46%), Gaps = 86/613 (14%)

Query: 53  DIYSWNAILS--AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
           DIY+ N ILS   +C S  L FA  LFDEM  R+ V+WN +IS  V +G    A  +Y  
Sbjct: 33  DIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKS 92

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M + G +P   T  S+ K       ++ G++ H L++K+G ++++Y  +ALL +YAKC  
Sbjct: 93  MKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCER 152

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            + A  VF+ +   N V++ A+++G         A  + R M  + V +D  + S +L +
Sbjct: 153 VRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTL 212

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
                           + KF +     Q+HC  IK G + D  + N+ +  Y++ G ++ 
Sbjct: 213 L--------------DEKKFYKLT--MQLHCKIIKHGVQFDNTVCNATITSYSQCGSLED 256

Query: 291 AEVIFSN-LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
           AE +F   +  R +V+WN M+A +    +   A +L   M+  GFEPD  T   ++ AC 
Sbjct: 257 AERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACS 316

Query: 350 RSGD--------IKTGRE--------------------------MFDSMPSPSVSSWNAM 375
              +        IK G E                          +F SM S    SWN++
Sbjct: 317 HKDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSI 376

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           L+ +SQ+ + + A+KLF  M+F  V  D    + +L SC+ +  L+ G+Q+H  ++K+  
Sbjct: 377 LTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGF 436

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
             +++VAS LI +YSKC   E A + F +  +   + WNS++   + +     A   F Q
Sbjct: 437 ESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQ 496

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           MR  ++     +F   L++C+ +    QGR +   +  D  +      S  +E Y    D
Sbjct: 497 MRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGI------SPRMEHYACAVD 550

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           ++G                        + GY DEA  L + M      PD + +  +L A
Sbjct: 551 LFG------------------------RAGYLDEAKALIESM---PFDPDAMVWKTLLGA 583

Query: 616 CSHSGLVDVGVEI 628
           C   G +++  ++
Sbjct: 584 CRACGDIELAAQV 596



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 218/481 (45%), Gaps = 68/481 (14%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFD-KMPHKDIYSWNA 59
           KK +     LH  I+++G+  D  +CN  I  YS+C +   A+ +FD  +  +D+ +WN+
Sbjct: 216 KKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNS 275

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           +L+A    D  E A+KLF +M +                                GF P 
Sbjct: 276 MLAAFLAHDRKETAFKLFLDMQQF-------------------------------GFEPD 304

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLY--AKCGWTKHAVPV 177
             T  ++  A +     ++G+  HGLVIK GL++ + + NA++++Y  +     + A+ V
Sbjct: 305 IYTYTTIISACS---HKDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNV 361

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  M   + V++ ++++G ++T     AL++F  M    V ID  + S+VL  C+     
Sbjct: 362 FHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCS----- 416

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                        +    GQQ+H LT+K GFE++  +++SL+ MY+K G ++ A   F  
Sbjct: 417 -----------DLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEK 465

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
             + S ++WN ++  Y Q  Q   A+ L  +M+    + D +T +  L AC   G ++ G
Sbjct: 466 TAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQG 525

Query: 358 REMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           R +  SM      SP +  +   +  + ++    EA  L   M F    PD      +L 
Sbjct: 526 RYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPF---DPDAMVWKTLLG 582

Query: 413 SCAAMGILESGKQV--HAASLKTASHIDNYVASGLIGIYSK-----CQRNELAERVFHRI 465
           +C A G +E   QV  H   L+   H    + S + G   +     C    + ER   ++
Sbjct: 583 ACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKV 642

Query: 466 P 466
           P
Sbjct: 643 P 643



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/515 (21%), Positives = 227/515 (44%), Gaps = 94/515 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+ I++ G  +  +  + L+++Y+KC     A  +F  +P ++  SWNA+++    
Sbjct: 121 GQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVL 180

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D + A+ L   M E  V   +   S L+   L+EK                       
Sbjct: 181 EGDHDTAFWLLRCMEEEGVRLDDGTFSPLL-TLLDEKKF--------------------- 218

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE-EMSEPN 185
           +K +  L         H  +IK G+  +  V NA ++ Y++CG  + A  VF+  +   +
Sbjct: 219 YKLTMQL---------HCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRD 269

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+ +M++     DR   A ++F  M +     D  + ++++  C+ +           
Sbjct: 270 LVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHK----------- 318

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY--AKNGDMDSAEVIFSNLPERSV 303
            DN       G+ +H L IK G E  + + N+++ MY  + +  M+ A  +F ++  +  
Sbjct: 319 -DN-------GKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDR 370

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRM----------------KSC--------------- 332
           VSWN ++ G+ Q   S  A++L   M                +SC               
Sbjct: 371 VSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVL 430

Query: 333 ----GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
               GFE ++  + +++    + G I+  R+ F+     S  +WN+++ +Y+Q      A
Sbjct: 431 TVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVA 490

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV---HAASLKTASHIDNYVASGL 445
           + LF +M+ + VK D  T    L++C+ +G++E G+ +    A+    +  +++Y  +  
Sbjct: 491 LGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACA-- 548

Query: 446 IGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           + ++ +    + A+ +   +P + D + W +++  
Sbjct: 549 VDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGA 583


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 208/592 (35%), Positives = 327/592 (55%), Gaps = 44/592 (7%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           N+L++ Y++ G  + A  VF+EM + N +++ ++++G  +  R  EA  MF  M  +   
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER--- 158

Query: 219 IDSVSLSSVLGVCAREGCGVES-DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
            +++S + ++      G   E+ +VF   D    RNV                      +
Sbjct: 159 -NTISWNGLVSGYINNGMINEAREVF---DRMPERNVVSW------------------TA 196

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           ++  Y K G +  AE +F  +PE++VVSW VM+ G  Q+ +  +A  L   M     E D
Sbjct: 197 MVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMP----EKD 252

Query: 338 EVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
            VT  NM+    + G +   R +FD MP  +V SW  M++ Y Q++    A KLF  M  
Sbjct: 253 VVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM-- 310

Query: 398 RGVKPDRTTLAIILSSCAAM--GILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQR 454
               P++  +     S  AM  G    G+   A+ L  A  I + VA + +I  + +   
Sbjct: 311 ----PEKNEV-----SWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGE 361

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              A +VF ++ E D   W++MI       L+++A   F+ M++  + P   S  +VLS 
Sbjct: 362 VPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSV 421

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           CA L++   GR++HAQ+ +  +  D++V S L+ MY KCG++  A+Q FD    K+ V W
Sbjct: 422 CAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMW 481

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I GYAQ+G G EA+R++ DM  SG+ PDD+TFV +L+ACS++G V  G+EIFNSM+ 
Sbjct: 482 NSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMET 541

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
            + VE  ++HY CM+D LGRAG  +EA  LI++MP + D +IW  LL +CR H  + LA+
Sbjct: 542 KYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAE 601

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA++L  L+PKN+ P+ LL+NIY+S GRWDD+  +R  M +  + K P  S
Sbjct: 602 VAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCS 653



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 256/527 (48%), Gaps = 71/527 (13%)

Query: 9   LLHAHILRNGLFDDTFLCNR--LIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           L+   ++ N  +   F+ +R  LI  YS+      A+ +FD+M  K+I SWN+I++   +
Sbjct: 82  LMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQ 141

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +   + A  +FD+M ERN +SWN L+S  + NG+  +A  V+++M               
Sbjct: 142 NKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMP-------------- 187

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                                    ++N+    A++  Y K G    A  +F +M E N 
Sbjct: 188 -------------------------ERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNV 222

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T M+ GL +  R+ EA  +F +M  K    D V+ ++++G   + G  VE+ +    
Sbjct: 223 VSWTVMLGGLLQEGRIDEACRLFDMMPEK----DVVTRTNMIGGYCQVGRLVEARMLF-- 276

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D    RNV    V   T+  G              Y +N  +D A  +F  +PE++ VSW
Sbjct: 277 DEMPRRNV----VSWTTMITG--------------YVQNQQVDIARKLFEVMPEKNEVSW 318

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-RSGDIKTGREMFDSMP 365
             M+ GY    +  +A EL   M         V + N ++ C  ++G++   R++FD M 
Sbjct: 319 TAMLKGYTNCGRLDEASELFNAMPI-----KSVVACNAMILCFGQNGEVPKARQVFDQMR 373

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
                +W+AM+  Y +     +A++LFR MQ  G++P+  +L  +LS CA +  L+ G++
Sbjct: 374 EKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGRE 433

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +HA  +++   +D YVAS L+ +Y KC     A++VF R    D+V WNS+I G + + L
Sbjct: 434 IHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGL 493

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
            +EA   F  M  + + P   +F  VLS+C+   +  +G ++   +E
Sbjct: 494 GVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSME 540



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 188/380 (49%), Gaps = 36/380 (9%)

Query: 42  AQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLE 101
           A  LFD MP KD+ +   ++   C+   L  A  LFDEMP RNVVSW  +I+  V+N   
Sbjct: 241 ACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQV 300

Query: 102 EKALSVYNKMSNEGFVPTHITLASVFKAST--ALLDVEHGRRCHGLVIKIGLDKNIYVAN 159
           + A  ++  M  +      ++  ++ K  T    LD E     + + IK     ++   N
Sbjct: 301 DIARKLFEVMPEK----NEVSWTAMLKGYTNCGRLD-EASELFNAMPIK-----SVVACN 350

Query: 160 ALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           A++  + + G    A  VF++M E +E T++AM+    +    ++ALE+FR+M R+ +  
Sbjct: 351 AMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRP 410

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           +  SL SVL VCA           A  D       HG+++H   ++  F+ D+++++ LL
Sbjct: 411 NFPSLISVLSVCAG---------LANLD-------HGREIHAQLVRSQFDLDVYVASVLL 454

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
            MY K G++  A+ +F     + VV WN +I GY Q     +A+ +   M   G  PD+V
Sbjct: 455 SMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDV 514

Query: 340 TSINMLVACVRSGDIKTGREMFDSMPSP-----SVSSWNAMLSSYSQSENHKEAIKLFRE 394
           T + +L AC  +G++K G E+F+SM +       +  +  M+    ++    EA+ L  +
Sbjct: 515 TFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEK 574

Query: 395 MQFRGVKPDRTTLAIILSSC 414
           M    ++ D      +L +C
Sbjct: 575 MP---MEADAIIWGALLGAC 591



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 131/262 (50%), Gaps = 5/262 (1%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSW 88
           +++ Y+ C     A  LF+ MP K + + NA++    ++ ++  A ++FD+M E++  +W
Sbjct: 321 MLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTW 380

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           + +I    R GLE  AL ++  M  EG  P   +L SV      L +++HGR  H  +++
Sbjct: 381 SAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVR 440

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
              D ++YVA+ LLS+Y KCG    A  VF+  +  + V + ++++G A+    VEAL +
Sbjct: 441 SQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRV 500

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGC---GVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           F  M    +  D V+   VL  C+  G    G+E  +F   + K+      +   C+   
Sbjct: 501 FHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLE--IFNSMETKYQVEQKIEHYACMVDL 558

Query: 266 LGFEADLHLSNSLLDMYAKNGD 287
           LG    L+ +  L++      D
Sbjct: 559 LGRAGKLNEAMDLIEKMPMEAD 580



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 15/204 (7%)

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           N I   ++LI  Y + G I  AR  FD M  KN ++WN ++ GY QN    EA  ++  M
Sbjct: 96  NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
                + + I++  +++   ++G+++   E+F+ M      E  +  +T M+    + G 
Sbjct: 156 ----SERNTISWNGLVSGYINNGMINEAREVFDRMP-----ERNVVSWTAMVRGYVKEGM 206

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYSLLAN 716
             EAE L  +MP K + V W V+L        +  A R    LF + P K+    + +  
Sbjct: 207 ISEAETLFWQMPEK-NVVSWTVMLGGLLQEGRIDEACR----LFDMMPEKDVVTRTNMIG 261

Query: 717 IYSSLGRWDDLRAVRELMSENCIV 740
            Y  +GR  + R + + M    +V
Sbjct: 262 GYCQVGRLVEARMLFDEMPRRNVV 285



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/194 (21%), Positives = 81/194 (41%), Gaps = 32/194 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA ++R+    D ++ + L+ +Y KC N   A+ +FD+   KD+  WN+I      
Sbjct: 431 GREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSI------ 484

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    I+   ++GL  +AL V++ M   G +P  +T   V
Sbjct: 485 -------------------------ITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGV 519

Query: 127 FKASTALLDVEHGRRC-HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A +   +V+ G    + +  K  +++ I     ++ L  + G    A+ + E+M    
Sbjct: 520 LSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEA 579

Query: 186 EVTFTAMMSGLAKT 199
           +      + G  +T
Sbjct: 580 DAIIWGALLGACRT 593


>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1221

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 195/599 (32%), Positives = 315/599 (52%), Gaps = 52/599 (8%)

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M   N V +T++MSG  +  R   AL MF  M+   V+ +  + ++ L  CA  G     
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRA- 59

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                          G+QVH L ++ GF  D  + + L++MY++ G + +A+ +F  +  
Sbjct: 60  ---------------GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDS 104

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR---------- 350
             VV +  +I+ + +  +   A E L +M   G +P+E T   +L AC R          
Sbjct: 105 PDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYL 164

Query: 351 -----------------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                  +G+ K  + +FDS+   +V SW +M+  Y +    +E
Sbjct: 165 IKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEE 224

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+++F +M   GV P+   L+I+L +C ++G+   G+Q+H +++K     D  V++ L+ 
Sbjct: 225 ALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLS 281

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y +    E  E + ++I   D+V W + I+    N    +A     QM      P  ++
Sbjct: 282 MYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYA 341

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           F++VLSSCA ++S  QG Q H    K G  ++I  G+ALI MY KCG +  AR  FD+MH
Sbjct: 342 FSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMH 401

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
             +  +WN +IHG+AQ+G  ++A+ ++  M ++G+KPDD TF+ +L  C+HSG+V+ G  
Sbjct: 402 THDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGEL 461

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F  M   +   P   HY CMID LGR G F EA  +I++MP + D +IW+ LL+SC+LH
Sbjct: 462 FFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 521

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            N+ + K AA+ L  L  ++SA Y L++NIY+  G W+D R VR  M E  + KD   S
Sbjct: 522 RNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCS 580



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 145/588 (24%), Positives = 257/588 (43%), Gaps = 103/588 (17%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           MP +NVV+W +++S   RNG  E AL+++  M   G  P      +   A   L  +  G
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
            + H L ++ G   + ++ + L+ +Y++CG    A  VF+ M  P+ V +T+++S   + 
Sbjct: 61  EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
                A E    M+++ +  +  +++++L  C R                    V GQQ+
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPR--------------------VLGQQI 160

Query: 260 HCLTI-KLGFEAD-LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           H   I K+G  +  ++ S +L+D Y++NG+   A+ +F +L  ++VVSW  M+  Y +  
Sbjct: 161 HGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDG 220

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------ 359
           +  +A+++   M S G +P+E     +L AC   G I  GR+                  
Sbjct: 221 RLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSN 277

Query: 360 -----------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                            M + + +P + SW   +S+  Q+   ++AI L  +M   G  P
Sbjct: 278 ALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTP 337

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           +    + +LSSCA +  L+ G Q H  +LK     +    + LI +YSKC +   A   F
Sbjct: 338 NGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAF 397

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             +   D+  WNS+I G + +    +A   F +MR N + P   +F  VL  C       
Sbjct: 398 DVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCN------ 451

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT-----WNEM 577
                H+ + ++G +                        FF +M  + + T     +  M
Sbjct: 452 -----HSGMVEEGEL------------------------FFRLMIDQYSFTPAPSHYACM 482

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           I    +NG  DEA+R+  DM     +PD + +  +L +C     +D+G
Sbjct: 483 IDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASCKLHRNLDIG 527



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 245/528 (46%), Gaps = 106/528 (20%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H+  +R G   D ++ + LIE+YS+C +  +A+ +FD+M   D+  + +++SA C
Sbjct: 59  AGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFC 118

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++ + E A +                  AL+             +M  +G  P   T+ +
Sbjct: 119 RNGEFELAAE------------------ALI-------------QMLKQGLKPNEHTMTT 147

Query: 126 VFKASTALLDVEHGRRCHG-LVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +  A   +L    G++ HG L+ KIGL  +++Y + AL+  Y++ G  K A  VF+ +  
Sbjct: 148 ILTACPRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHC 203

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V++ +MM    +  R+ EAL++F  MI + V  +  +LS VLG C   G        
Sbjct: 204 KNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL------- 256

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q+HC  IK     D+ +SN+LL MY + G ++  E + + +    +
Sbjct: 257 ------------GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDL 304

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------- 349
           VSW   I+   Q     KAI LL +M S GF P+     ++L +C               
Sbjct: 305 VSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCL 364

Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + G + + R  FD M +  V+SWN+++  ++Q  +  +A
Sbjct: 365 ALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKA 424

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG---- 444
           +++F +M+  G+KPD +T   +L  C   G++E G+      L     ID Y  +     
Sbjct: 425 LEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE------LFFRLMIDQYSFTPAPSH 478

Query: 445 ---LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-SLDI 487
              +I +  +  R + A R+ + +P E D + W +++A   L+ +LDI
Sbjct: 479 YACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDI 526


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 200/612 (32%), Positives = 329/612 (53%), Gaps = 54/612 (8%)

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           H+  +F+E  +        ++   ++ D+  EAL +F  + R     D  SLS VL VC 
Sbjct: 44  HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVC- 102

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             GC             F R V G+QVHC  IK GF  D+ +  SL+DMY K   ++  E
Sbjct: 103 --GC------------LFDRIV-GKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGE 147

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  +  ++VVSW  ++AGY Q   + +A++L  +M+  G +P+  T   +L      G
Sbjct: 148 RVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADG 207

Query: 353 DIKTG-----------------------------------REMFDSMPSPSVSSWNAMLS 377
            ++ G                                   + +FDSM + +  SWN+M++
Sbjct: 208 AVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIA 267

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            +  +    EA +LF  M+  GVK  +T  A ++  CA +  +   KQ+H   +K  S  
Sbjct: 268 GFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDF 327

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
           D  + + L+  YSKC   + A ++F  +  + ++V W ++I+G   N     A   F QM
Sbjct: 328 DLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQM 387

Query: 497 RQNE-MYPTQFSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           R+ E + P +F+F++VL++CA  ++S  QG+Q H+   K G+ N + V SAL+ MY K G
Sbjct: 388 RREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRG 447

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
           +I  A + F     ++ V+WN MI GYAQ+G G ++++++++M +  ++ D ITF+ +++
Sbjct: 448 NIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVIS 507

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           AC+H+GLV+ G   F+ M  D+ + P ++HY+CM+D   RAG   +A  LI++MP     
Sbjct: 508 ACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGA 567

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
            IW  LL++CR+H NV+L + AAE+L  L P++SA Y LL+NIY++ G W +   VR+LM
Sbjct: 568 TIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLM 627

Query: 735 SENCIVKDPAYS 746
               + K+  YS
Sbjct: 628 DMKKVKKEAGYS 639



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 246/518 (47%), Gaps = 91/518 (17%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            + GK +H   ++ G  +D  +   L+++Y                              
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMY------------------------------ 137

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             K++ +E   ++FDEM  +NVVSW +L++   +NGL E+AL ++++M  EG  P   T 
Sbjct: 138 -MKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTF 196

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A+V     A   VE G + H +VIK GLD  I+V N+++++Y+K      A  VF+ M  
Sbjct: 197 AAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMEN 256

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V++ +M++G       +EA E+F  M  + V +     ++V+ +CA     ++   F
Sbjct: 257 RNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCA----NIKEMSF 312

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL-PERS 302
           A            +Q+HC  IK G + DL++  +L+  Y+K  ++D A  +F  +   ++
Sbjct: 313 A------------KQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQN 360

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVAC------------- 348
           VVSW  +I+GY Q  ++ +A+ L  +M +  G EP+E T  ++L AC             
Sbjct: 361 VVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQF 420

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G+I++  E+F       + SWN+M+S Y+Q    
Sbjct: 421 HSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCG 480

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK---TASHIDNYVA 442
           K+++K+F EM+ + ++ D  T   ++S+C   G++  G++     +K       +++Y  
Sbjct: 481 KKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHY-- 538

Query: 443 SGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           S ++ +YS+    E A  + +++P       W +++A 
Sbjct: 539 SCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 576



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 257/531 (48%), Gaps = 55/531 (10%)

Query: 75  KLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALL 134
           +LFDE P++ +   N+L+    RN   ++AL+++  +   G      +L+ V K    L 
Sbjct: 47  QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D   G++ H   IK G  +++ V  +L+ +Y K    +    VF+EM   N V++T++++
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G  +     +AL++F  M  + +  +  + ++VLG  A +G  VE               
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADG-AVEK-------------- 211

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G QVH + IK G ++ + + NS+++MY+K+  +  A+ +F ++  R+ VSWN MIAG+ 
Sbjct: 212 -GVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFV 270

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VRSG-----D 353
                 +A EL  RM+  G +  +     ++  C                +++G     +
Sbjct: 271 TNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLN 330

Query: 354 IKTG--------REMFDSMP-------SPSVSSWNAMLSSYSQSENHKEAIKLFREMQF- 397
           IKT          E+ D+           +V SW A++S Y Q+     A+ LF +M+  
Sbjct: 331 IKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRRE 390

Query: 398 RGVKPDRTTLAIILSSCAA-MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
            GV+P+  T + +L++CAA    +E GKQ H+ S+K+       V+S L+ +Y+K    E
Sbjct: 391 EGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIE 450

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A  VF R  + D+V WNSMI+G + +    ++   F++MR   +     +F  V+S+C 
Sbjct: 451 SANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACT 510

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDIYGARQFFDMM 566
                 +G++    + KD ++       S ++++Y + G +  A    + M
Sbjct: 511 HAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKM 561


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 209/596 (35%), Positives = 328/596 (55%), Gaps = 44/596 (7%)

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
           I   N+L++ Y++ G  + A  VF+EM + N +++ ++++G  +  R  EA  MF  M  
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
           +    +++S + ++      G   E+ +VF   D    RNV                   
Sbjct: 158 R----NTISWNGLVSGYINNGMINEAREVF---DRMPERNVVSW---------------- 194

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
              +++  Y K G +  AE +F  +PE++VVSW VM+ G  Q+ +  +A  L   M    
Sbjct: 195 --TAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMP--- 249

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
            E D VT  NM+    + G +   R +FD MP  +V SW  M++ Y Q++    A KLF 
Sbjct: 250 -EKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFE 308

Query: 394 EMQFRGVKPDRTTLAIILSSCAAM--GILESGKQVHAASLKTASHIDNYVA-SGLIGIYS 450
            M      P++  +     S  AM  G    G+   A+ L  A  I + VA + +I  + 
Sbjct: 309 VM------PEKNEV-----SWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFG 357

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           +      A +VF ++ E D   W++MI       L+++A   F+ M++  + P   S  +
Sbjct: 358 QNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLIS 417

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           VLS CA L++   GR++HAQ+ +  +  D++V S L+ MY KCG++  A+Q FD    K+
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V WN +I GYAQ+G G EA+R++ DM  SG+ PDD+TFV +L+ACS++G V  G+EIFN
Sbjct: 478 VVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN 537

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM+  + VE  ++HY CM+D LGRAG  +EA  LI++MP + D +IW  LL +CR H  +
Sbjct: 538 SMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKL 597

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LA+ AA++L  L+PKN+ P+ LL+NIY+S GRWDD+  +R  M +  + K P  S
Sbjct: 598 DLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCS 653



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 256/527 (48%), Gaps = 71/527 (13%)

Query: 9   LLHAHILRNGLFDDTFLCNR--LIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           L+   ++ N  +   F+ +R  LI  YS+      A+ +FD+M  K+I SWN+I++   +
Sbjct: 82  LMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQ 141

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +   + A  +FD+M ERN +SWN L+S  + NG+  +A  V+++M               
Sbjct: 142 NKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMP-------------- 187

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                                    ++N+    A++  Y K G    A  +F +M E N 
Sbjct: 188 -------------------------ERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNV 222

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T M+ GL +  R+ EA  +F +M  K    D V+ ++++G   + G  VE+ +    
Sbjct: 223 VSWTVMLGGLLQEGRIDEACRLFDMMPEK----DVVTRTNMIGGYCQVGRLVEARMLF-- 276

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D    RNV    V   T+  G              Y +N  +D A  +F  +PE++ VSW
Sbjct: 277 DEMPRRNV----VSWTTMITG--------------YVQNQQVDIARKLFEVMPEKNEVSW 318

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-RSGDIKTGREMFDSMP 365
             M+ GY    +  +A EL   M         V + N ++ C  ++G++   R++FD M 
Sbjct: 319 TAMLKGYTNCGRLDEASELFNAMPI-----KSVVACNAMILCFGQNGEVPKARQVFDQMR 373

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
                +W+AM+  Y +     +A++LFR MQ  G++P+  +L  +LS CA +  L+ G++
Sbjct: 374 EKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGRE 433

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +HA  +++   +D YVAS L+ +Y KC     A++VF R    D+V WNS+I G + + L
Sbjct: 434 IHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGL 493

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
            +EA   F  M  + + P   +F  VLS+C+   +  +G ++   +E
Sbjct: 494 GVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSME 540



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 188/380 (49%), Gaps = 36/380 (9%)

Query: 42  AQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLE 101
           A  LFD MP KD+ +   ++   C+   L  A  LFDEMP RNVVSW  +I+  V+N   
Sbjct: 241 ACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQV 300

Query: 102 EKALSVYNKMSNEGFVPTHITLASVFKAST--ALLDVEHGRRCHGLVIKIGLDKNIYVAN 159
           + A  ++  M  +      ++  ++ K  T    LD E     + + IK     ++   N
Sbjct: 301 DIARKLFEVMPEK----NEVSWTAMLKGYTNCGRLD-EASELFNAMPIK-----SVVACN 350

Query: 160 ALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           A++  + + G    A  VF++M E +E T++AM+    +    ++ALE+FR+M R+ +  
Sbjct: 351 AMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRP 410

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           +  SL SVL VCA           A  D       HG+++H   ++  F+ D+++++ LL
Sbjct: 411 NFPSLISVLSVCAG---------LANLD-------HGREIHAQLVRSQFDLDVYVASVLL 454

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
            MY K G++  A+ +F     + VV WN +I GY Q     +A+ +   M   G  PD+V
Sbjct: 455 SMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDV 514

Query: 340 TSINMLVACVRSGDIKTGREMFDSMPSP-----SVSSWNAMLSSYSQSENHKEAIKLFRE 394
           T + +L AC  +G++K G E+F+SM +       +  +  M+    ++    EA+ L  +
Sbjct: 515 TFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEK 574

Query: 395 MQFRGVKPDRTTLAIILSSC 414
           M    ++ D      +L +C
Sbjct: 575 MP---MEADAIIWGALLGAC 591



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 131/262 (50%), Gaps = 5/262 (1%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSW 88
           +++ Y+ C     A  LF+ MP K + + NA++    ++ ++  A ++FD+M E++  +W
Sbjct: 321 MLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTW 380

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           + +I    R GLE  AL ++  M  EG  P   +L SV      L +++HGR  H  +++
Sbjct: 381 SAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVR 440

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
              D ++YVA+ LLS+Y KCG    A  VF+  +  + V + ++++G A+    VEAL +
Sbjct: 441 SQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRV 500

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGC---GVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           F  M    +  D V+   VL  C+  G    G+E  +F   + K+      +   C+   
Sbjct: 501 FHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLE--IFNSMETKYQVEQKIEHYACMVDL 558

Query: 266 LGFEADLHLSNSLLDMYAKNGD 287
           LG    L+ +  L++      D
Sbjct: 559 LGRAGKLNEAMDLIEKMPMEAD 580



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 15/204 (7%)

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           N I   ++LI  Y + G I  AR  FD M  KN ++WN ++ GY QN    EA  ++  M
Sbjct: 96  NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
                + + I++  +++   ++G+++   E+F+ M      E  +  +T M+    + G 
Sbjct: 156 ----SERNTISWNGLVSGYINNGMINEAREVFDRMP-----ERNVVSWTAMVRGYVKEGM 206

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYSLLAN 716
             EAE L  +MP K + V W V+L        +  A R    LF + P K+    + +  
Sbjct: 207 ISEAETLFWQMPEK-NVVSWTVMLGGLLQEGRIDEACR----LFDMMPEKDVVTRTNMIG 261

Query: 717 IYSSLGRWDDLRAVRELMSENCIV 740
            Y  +GR  + R + + M    +V
Sbjct: 262 GYCQVGRLVEARMLFDEMPRRNVV 285



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/194 (21%), Positives = 81/194 (41%), Gaps = 32/194 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA ++R+    D ++ + L+ +Y KC N   A+ +FD+   KD+  WN+I      
Sbjct: 431 GREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSI------ 484

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    I+   ++GL  +AL V++ M   G +P  +T   V
Sbjct: 485 -------------------------ITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGV 519

Query: 127 FKASTALLDVEHGRRC-HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A +   +V+ G    + +  K  +++ I     ++ L  + G    A+ + E+M    
Sbjct: 520 LSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEA 579

Query: 186 EVTFTAMMSGLAKT 199
           +      + G  +T
Sbjct: 580 DAIIWGALLGACRT 593


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 189/629 (30%), Positives = 324/629 (51%), Gaps = 56/629 (8%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KNI+  N +LS Y+  G    A  +F      N  T+T MM   A   R  +AL +FR M
Sbjct: 72  KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
           + + V  D V++++VL +    GC V S                  +H   IK G +  +
Sbjct: 132 LGEGVIPDRVTVTTVLNL---PGCTVPS------------------LHPFAIKFGLDTHV 170

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            + N+LLD Y K+G + +A  +F  + ++  V++N M+ G  ++   T+A++L   M+  
Sbjct: 171 FVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRA 230

Query: 333 GFEPDEVTSINMLVACVRSGDIKTG----------------------------------- 357
           G      T  ++L        +  G                                   
Sbjct: 231 GIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDM 290

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R +FD MP     S+N ++++Y+ ++     ++LFREMQ  G        A +LS   ++
Sbjct: 291 RRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSL 350

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
             +  GKQ+HA  +      ++ + + LI +YSKC   + A+  F    E   + W ++I
Sbjct: 351 PDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALI 410

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            G   N    EA   F  MR+  + P + +F++++ + + L+    GRQ+H+ + + GY 
Sbjct: 411 TGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK 470

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           + +F GS L++MY KCG +  A + FD M  +N+++WN +I  YA  G    A+++++ M
Sbjct: 471 SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGM 530

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           +  G  PD +TF+++L ACSH+GL D  ++ F+ M+  + + P  +HY C+ID LGR G 
Sbjct: 531 LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGC 590

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
           F + + ++ EMP K DP+IW  +L SCR+H N  LA+ AA++LF ++P ++ PY +L+NI
Sbjct: 591 FSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNI 650

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y+  G+W+D   V+++M +  + K+  YS
Sbjct: 651 YARAGQWEDAACVKKIMRDRGVRKESGYS 679



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 253/542 (46%), Gaps = 56/542 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           L A +++ G    T+  N  +       + H A+ +FD+MPHK+I+S N ILSA   S D
Sbjct: 30  LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGD 89

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           L  A  LF   P RN  +W  ++ A    G    ALS++  M  EG +P  +T+ +V   
Sbjct: 90  LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNL 149

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
               +        H   IK GLD +++V N LL  Y K G    A  VF EM + + VT+
Sbjct: 150 PGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTY 204

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            AMM G +K     +AL++F  M R  +     + SS+L V A                 
Sbjct: 205 NAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAA----------------G 248

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
            +  + G QVH L ++     ++ ++NSLLD Y+K   +D    +F  +PER  VS+NV+
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------- 360
           IA Y     +   + L + M+  GF+   +    ML       D+  G+++         
Sbjct: 309 IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 368

Query: 361 --------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                     F +    S  SW A+++ Y Q+  H+EA++LF +
Sbjct: 369 ASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSD 428

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+  G++PDR T + I+ + +++ ++  G+Q+H+  +++      +  S L+ +Y+KC  
Sbjct: 429 MRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGC 488

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A R F  +PE + + WN++I+  +       A   F+ M      P   +F +VL++
Sbjct: 489 LDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 548

Query: 515 CA 516
           C+
Sbjct: 549 CS 550



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 152/608 (25%), Positives = 259/608 (42%), Gaps = 111/608 (18%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           ++  N +L A CK   L  A ++F EM +++ V++N ++    + GL  +AL ++  M  
Sbjct: 170 VFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRR 229

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
            G   TH T +S+   +  +  +  G + H LV++     N++V N+LL  Y+KC     
Sbjct: 230 AGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDD 289

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
              +F+EM E + V++  +++  A        L +FR M +       +  +++L V   
Sbjct: 290 MRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSV--- 346

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
              G   DV             G+Q+H   + LG  ++  L N+L+DMY+K G +D+A+ 
Sbjct: 347 --AGSLPDVHI-----------GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS 393

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
            FSN  E+S +SW  +I GY Q  Q  +A++L   M+  G  PD  T  +++ A      
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 453

Query: 354 IKTGREM-----------------------------------FDSMPSPSVSSWNAMLSS 378
           I  GR++                                   FD MP  +  SWNA++S+
Sbjct: 454 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV-----HAASLKT 433
           Y+     K AIK+F  M   G  PD  T   +L++C+  G+ +   +      H  S+  
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISP 573

Query: 434 -----ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
                A  ID     G +G +S+ Q+  L E  F    + D + W S+     L+S  I 
Sbjct: 574 WKEHYACVIDTL---GRVGCFSQVQK-MLVEMPF----KADPIIWTSI-----LHSCRIH 620

Query: 489 AFMFFKQMRQNEMY---PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
                 ++  ++++   PT  +   +LS+    +  ++      +I +D           
Sbjct: 621 GNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRD----------- 669

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG--------DEAVRLYKDM 597
                       G R+      G + V   + I+ +A N           DE  RLYK+M
Sbjct: 670 -----------RGVRK----ESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEM 714

Query: 598 IASGVKPD 605
              G KPD
Sbjct: 715 DKQGYKPD 722



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 197/417 (47%), Gaps = 55/417 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA +LR+    + F+ N L++ YSKC                              
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKC------------------------------ 284

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D L+   +LFDEMPER+ VS+N +I+A   N      L ++ +M   GF    +  A++
Sbjct: 285 -DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATM 343

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              + +L DV  G++ H  ++ +GL     + NAL+ +Y+KCG    A   F   SE + 
Sbjct: 344 LSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSA 403

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TA+++G  +  +  EAL++F  M R  +  D  + SS++                ++
Sbjct: 404 ISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSII----------------KA 447

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            +  +    G+Q+H   I+ G+++ +   + L+DMYAK G +D A   F  +PER+ +SW
Sbjct: 448 SSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISW 507

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N +I+ Y    ++  AI++ + M  CGF PD VT +++L AC  +G      + F  M  
Sbjct: 508 NAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKH 567

Query: 367 P-SVSSWN----AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
             S+S W      ++ +  +     +  K+  EM F   K D      IL SC   G
Sbjct: 568 QYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPF---KADPIIWTSILHSCRIHG 621


>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
          Length = 701

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 211/717 (29%), Positives = 359/717 (50%), Gaps = 58/717 (8%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           KS  L  A ++F +    + V WN  +S  VRNG    A+ ++  M      P   T + 
Sbjct: 7   KSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSG 66

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A  A  ++  GR  HGLV++   + +++V  +L+++YAKCG    A+  F  M   N
Sbjct: 67  ALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRN 126

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T  ++G  + D  V A+ + R M+R  V+I+  + +S+L  CA             
Sbjct: 127 VVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACA------------- 173

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF---SNLPERS 302
              + S      Q+H + +K     D  +  +L+  Y   G ++ +E +F     +  RS
Sbjct: 174 ---QMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRS 230

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE------VTSIN------------- 343
           +  W+  I+G    +   ++++LL+RM   G  P++       +S+N             
Sbjct: 231 I--WSAFISGV-SNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAI 287

Query: 344 -------MLVACV------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                  +LV         R  +++   ++F+ M      SW AM++ ++   +  EA  
Sbjct: 288 KEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFL 347

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            FR M   G KPD  +L  ILS+C     L  GK+VH  +L+       ++    I +YS
Sbjct: 348 TFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGET-TFINDCFISMYS 406

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KCQ  + A R+F   P  D V W+SMI+G + N    EA   F+ M    +    +  ++
Sbjct: 407 KCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSS 466

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +LS CA ++  F  + +H    K G ++D  V S+L+++Y + G++  +R+ FD +   +
Sbjct: 467 ILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPD 526

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V W  +I GYAQ+G    A+ ++  M+  GV+PD +  V++L+ACS +GLV+ G   FN
Sbjct: 527 LVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFN 586

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM+  +GVEP L HY CM+D LGR+G   EA+  +D MP K D ++W  LL++CR+H + 
Sbjct: 587 SMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDT 646

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            L  R  E   R    +S  ++ L+NI ++ G W+++  +R+ M    + K+P +S+
Sbjct: 647 VLG-RFVENKIREGNYDSGSFATLSNILANSGDWEEVARIRKTMKG--VNKEPGWSM 700



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 154/571 (26%), Positives = 265/571 (46%), Gaps = 71/571 (12%)

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           ++ L AK G  + A+ VF +    + V + A +SG  +      A+EMFR M+  +   +
Sbjct: 1   MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 60

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
           S + S  L  CA    G E  V             G+ VH L ++   E D+ +  SL++
Sbjct: 61  SFTYSGALSACA---AGEELSV-------------GRAVHGLVLRRDPEYDVFVGTSLVN 104

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MYAK GDM +A   F  +P R+VVSW   IAG+ Q  +   A+ LL+ M   G   ++ T
Sbjct: 105 MYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYT 164

Query: 341 SINMLVACVRS-----------------------------------GDIKTGREMFDSMP 365
           + ++L+AC +                                    G I+   ++F+   
Sbjct: 165 ATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAG 224

Query: 366 SPSVSS-WNAMLSSYSQSENHK--EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
           + S  S W+A +S  S   NH    +++L R M  +G++P+    A + SS  +   +E 
Sbjct: 225 TVSNRSIWSAFISGVS---NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS---IEF 278

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           G Q+H++++K        V S L  +YS+C   + + +VF  + E D V W +M+AG + 
Sbjct: 279 GGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFAT 338

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           +   +EAF+ F+ M  +   P   S   +LS+C +     +G++VH    +  Y    F+
Sbjct: 339 HGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFI 397

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
               I MY KC  +  AR+ FD    K+ V W+ MI GYA NG G+EA+ L++ M+A+ +
Sbjct: 398 NDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASI 457

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIF----NSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
           + D     +IL+ C+     D+    +    +   +  G+       + ++    R+G+ 
Sbjct: 458 RIDSYICSSILSLCA-----DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNM 512

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
            ++  + DE+    D V W  ++     H +
Sbjct: 513 DDSRKVFDEISVP-DLVAWTTIIDGYAQHGS 542



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 136/566 (24%), Positives = 245/566 (43%), Gaps = 57/566 (10%)

Query: 50  PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN 109
           P  D++   ++++   K  D+  A + F  MP RNVVSW   I+  V++     A+ +  
Sbjct: 92  PEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLR 151

Query: 110 KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           +M   G      T  S+  A   +  V    + HG+V+K  +  +  V  AL+S Y   G
Sbjct: 152 EMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFG 211

Query: 170 WTKHAVPVFEEMSE-PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           + + +  VFEE     N   ++A +SG++    ++ ++++ R M  + +  +    +SV 
Sbjct: 212 FIELSEKVFEEAGTVSNRSIWSAFISGVSN-HSLLRSVQLLRRMFHQGLRPNDKCYASVF 270

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
                    V S  F            G Q+H   IK GF   + + ++L  MY++  ++
Sbjct: 271 S-------SVNSIEF------------GGQLHSSAIKEGFIHGILVGSALSTMYSRCDNV 311

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
             +  +F  + ER  VSW  M+AG+     S +A    + M   GF+PD V+   +L AC
Sbjct: 312 QDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSAC 371

Query: 349 VRS----------------------------------GDIKTGREMFDSMPSPSVSSWNA 374
            R                                     ++T R +FD+ P      W++
Sbjct: 372 NRPECLLKGKEVHGHTLRVYGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSS 431

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+S Y+ +   +EAI LF+ M    ++ D    + ILS CA +      K +H  ++K  
Sbjct: 432 MISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAG 491

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V+S L+ +YS+    + + +VF  I   D+V W ++I G + +     A   F 
Sbjct: 492 ILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFD 551

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKC 553
            M Q  + P      +VLS+C++     QG      +    G   ++     ++++  + 
Sbjct: 552 LMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRS 611

Query: 554 GDIYGARQFFDMMHGK-NTVTWNEMI 578
           G +  A+ F D M  K + + W+ ++
Sbjct: 612 GRLAEAKYFVDSMPMKPDLMVWSTLL 637



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 4/108 (3%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LH + ++ G+  D  + + L+++YS+  N   ++ +FD++   D+ +W  I+    + 
Sbjct: 481 KPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQH 540

Query: 68  DDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
              + A  +FD M +  V    V   +++SA  RNGL E+  + +N M
Sbjct: 541 GSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSM 588


>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
          Length = 673

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 194/623 (31%), Positives = 315/623 (50%), Gaps = 54/623 (8%)

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK--AVS 218
           LLS YA  G    A  V +    P+   +  M+  L       +A+ + R M R+  A +
Sbjct: 61  LLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAA 120

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
              V LS  L  C R            +D ++     G+++HC  +K G  AD  + NSL
Sbjct: 121 QADVVLSLALKACVRS-----------ADFRY-----GRRLHCDVVKAG-GADGFVMNSL 163

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +DMYAK GD+++A  +F  +PER+VVSW  M++G  Q   + + + L   M+     P E
Sbjct: 164 VDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSE 223

Query: 339 VTSINMLVACVRSGDIKTG-----------------------------------REMFDS 363
            T +++L AC   G +  G                                   R +FD 
Sbjct: 224 YTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDE 283

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +    +  W AM+  Y+Q++   +A++LF   +F  + P+  T+A ++S+ A +  L  G
Sbjct: 284 LEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLG 343

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           + VHA  +K  +   + V + L+ +Y+KCQ    A  +F RI   D+V WNSM+AG S N
Sbjct: 344 RSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSEN 403

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
            +  E+ + F +MR   + P   S    LS+C  L+    G+  H    K  ++++I+V 
Sbjct: 404 GMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVN 463

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           +AL+ +Y KC D+  A++ F+ M  +N+VTW+ MI GY   G    ++ L+ +M+   + 
Sbjct: 464 TALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIH 523

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           P+++ F +IL+ACSH+G+V  G E F+SM     + P + HY CM+D + RAG+  EA  
Sbjct: 524 PNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALE 583

Query: 664 LIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGR 723
            I  MP K    +W   L  C+LH+ +   + A +++  L P+    Y L++N+Y+S GR
Sbjct: 584 FIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGR 643

Query: 724 WDDLRAVRELMSENCIVKDPAYS 746
           WD  + +R  M E  +VK P  S
Sbjct: 644 WDKSQTIRRWMQEQGLVKLPGCS 666



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 235/474 (49%), Gaps = 63/474 (13%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D +  N+++    K+ DLE A K+FD +PERNVVSW +++S  ++NG+ E+ L ++N+M 
Sbjct: 156 DGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMR 215

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            +   P+  T+ SV  A   L  +  GR  HG VIK GL  N +++ +LL +YAKC   +
Sbjct: 216 QDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVE 275

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI--DSVSLSSVLGV 230
            A  VF+E+   + V +TAM+ G  +  R ++AL++F  + +K VSI  +SV++++V+  
Sbjct: 276 DARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLF--LHKKFVSIVPNSVTIATVISA 333

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMD 289
            A                +      G+ VH + +KLG  E+D+ + N+L+DMYAK   + 
Sbjct: 334 SA----------------QLRHLPLGRSVHAIGVKLGTMESDV-VRNALVDMYAKCQALP 376

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
            A  IF  +  + VV+WN M+AGY +   + +++ L  RM+  G  PD ++ +N L ACV
Sbjct: 377 EANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACV 436

Query: 350 -----------------------------------RSGDIKTGREMFDSMPSPSVSSWNA 374
                                              +  D+ + + +F+ M   +  +W+A
Sbjct: 437 CLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSA 496

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH---AASL 431
           M+  Y    +   +I LF EM    + P+      ILS+C+  G++ +GK+     A   
Sbjct: 497 MIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHF 556

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS 484
                + +Y    ++ + ++    E A      +P +  I  W S + G  L+S
Sbjct: 557 NITPSMKHYAC--MVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHS 608



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 208/424 (49%), Gaps = 55/424 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +++ GL  ++F+   L+++Y+KC     A+ +FD++   DI  W A++    +
Sbjct: 242 GRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQ 301

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +     A +LF                      L +K +S+         VP  +T+A+V
Sbjct: 302 NKRPLDALQLF----------------------LHKKFVSI---------VPNSVTIATV 330

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             AS  L  +  GR  H + +K+G  ++  V NAL+ +YAKC     A  +F  +   + 
Sbjct: 331 ISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDV 390

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + +MM+G ++     E+L +F  M  + +S D++S+ + L  C    C  +  +    
Sbjct: 391 VAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACV---CLADLHI---- 443

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+  H   IK  F ++++++ +LL++Y+K  D+ SA+ +F+++ +R+ V+W
Sbjct: 444 ---------GKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTW 494

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           + MI GYG +  S  +I+L   M      P+EV   ++L AC  +G +  G+E FDSM  
Sbjct: 495 SAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMAR 554

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               +PS+  +  M+   +++ N +EA++  + M    +K   +     L  C     LE
Sbjct: 555 HFNITPSMKHYACMVDVMARAGNLEEALEFIQNMP---IKAGISVWGSFLHGCKLHSRLE 611

Query: 422 SGKQ 425
            G++
Sbjct: 612 FGEE 615


>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
 gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 212/644 (32%), Positives = 328/644 (50%), Gaps = 56/644 (8%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKC--GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           H    K G+  +IYVAN +L  Y+KC  G    A  +F+EM   + VT+  M++G  ++ 
Sbjct: 22  HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
            +  A E  + M R+    D  +  S+L   A   C               R+  GQQVH
Sbjct: 82  NLGAAWEFLKSMKRRGFQADGYTFGSILKGVAH-AC---------------RHDLGQQVH 125

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            L +K+G+E  ++  ++LLDMYAK   ++ A  +F  +P R+ VSWN +I G+ Q     
Sbjct: 126 SLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRD 185

Query: 321 KAIELLQRMKSCG-------FEP-------DEVTSINM---------------------L 345
            A  LL  M+  G       F P       D+   + M                     L
Sbjct: 186 TAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATL 245

Query: 346 VACVRSGDIKTGREMFD-SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
            A    G ++  + +FD ++ +  + +WN+ML +Y   +  ++A  LF EMQ  G +PD 
Sbjct: 246 TAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDI 305

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN--ELAERVF 462
            T   ++S+C A      GK  HA  +K        + + LI +Y K      E A  +F
Sbjct: 306 YTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLF 365

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
           H +   D V WNS++ G S      +A   F  MR +      ++++ VL SC+ L+   
Sbjct: 366 HSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQ 425

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G+Q+H    K G+ ++ FV S+LI MY KCG I  A + F+    ++++TWN ++  YA
Sbjct: 426 LGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYA 485

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           Q+G GD A+ L+  M    VK D +TFVA+LTACSH GLV+ G  +  SM+ D+G+ P +
Sbjct: 486 QHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRM 545

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           +HY C +D  GRAG+  EA+ LID MP + + ++ + LL +CR   N+ LA + A +L  
Sbjct: 546 EHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLE 605

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++P+    Y +L+N+Y  L RWDD  +V  LM E  + K P +S
Sbjct: 606 VEPEEHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGWS 649



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 164/615 (26%), Positives = 273/615 (44%), Gaps = 89/615 (14%)

Query: 54  IYSWNAIL--SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           IY  N IL   ++C S DL  A KLFDEMP ++ V+WN +I+  V +G    A      M
Sbjct: 34  IYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSM 93

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
              GF     T  S+ K        + G++ H L++KIG ++++Y  +ALL +YAKC   
Sbjct: 94  KRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERV 153

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
           + A  VF+ M   N V++ A++ G  +      A  +   M ++ V ++  + + +L + 
Sbjct: 154 EDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTL- 212

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
                 ++ D F +            Q+HC  IK G E    L N+ L  Y++ G ++ A
Sbjct: 213 ------LDGDKFYKLT---------MQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDA 257

Query: 292 EVIFSN-LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           + +F   +  R +V+WN M+  Y    +   A  L   M+  GFEPD  T   ++ AC  
Sbjct: 258 KRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFA 317

Query: 351 SGD-----------IKTGRE--------------------------MFDSMPSPSVSSWN 373
           +             IK G E                          +F SM S    SWN
Sbjct: 318 AAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWN 377

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           ++L+ +SQ    ++A+KLF  M+    + D    + +L SC+ + IL+ G+Q+H  ++KT
Sbjct: 378 SILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKT 437

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               +++VAS LI +YSKC   E A + F    +   + WNS++   + +     A   F
Sbjct: 438 GFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLF 497

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
             MR+ E+     +F  VL++C+ +    QGR V   +E D  +         +E Y   
Sbjct: 498 SIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGI------PPRMEHYACA 551

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
            D++G                        + GY +EA  L   M     +P+ +    +L
Sbjct: 552 VDLFG------------------------RAGYLEEAKALIDSM---PFQPNAMVLKTLL 584

Query: 614 TACSHSGLVDVGVEI 628
            AC   G +++  ++
Sbjct: 585 GACRACGNIELAAQV 599



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/463 (22%), Positives = 197/463 (42%), Gaps = 89/463 (19%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H  G+ +H+ I++ G     +  + L+++Y+KC     A  +F  MP ++  SWNA++  
Sbjct: 118 HDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDG 177

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP--THI 121
             +  D + A+ L D M +  V                        ++ +  F P  T +
Sbjct: 178 FVQVGDRDTAFWLLDCMQKEGV------------------------RVEDGTFAPLLTLL 213

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE-E 180
                +K +  L         H  +IK GL+    + NA L+ Y++CG  + A  VF+  
Sbjct: 214 DGDKFYKLTMQL---------HCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGA 264

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           +   + VT+ +M+      D+  +A  +F  M       D  + + V+  C         
Sbjct: 265 VGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISAC--------- 315

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK--NGDMDSAEVIFSNL 298
             FA +   +     G+  H L IK G E  + + N+L+ MY K  N  M++A  +F ++
Sbjct: 316 --FAAAHKNY-----GKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSM 368

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS--------------------------- 331
             +  VSWN ++ G+ Q   S  A++L   M+S                           
Sbjct: 369 KSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQ 428

Query: 332 --------CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                    GF+ ++  + +++    + G I+   + F+     S  +WN+++ +Y+Q  
Sbjct: 429 QIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHG 488

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
               A+ LF  M+ R VK D  T   +L++C+ +G++E G+ V
Sbjct: 489 QGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCV 531



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 144/311 (46%), Gaps = 46/311 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK  HA +++ GL +   +CN LI +Y K NN                            
Sbjct: 324 GKSFHALVIKRGLEESVTICNALITMYLKLNNK--------------------------- 356

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A  LF  M  ++ VSWN++++   + G  E AL ++  M +          ++V
Sbjct: 357 --SMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAV 414

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            ++ + L  ++ G++ H L +K G D N +VA++L+ +Y+KCG  + A   FE+ ++ + 
Sbjct: 415 LRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESS 474

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC---------G 237
           +T+ ++M   A+  +   AL++F +M  + V +D V+  +VL  C+  G           
Sbjct: 475 ITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKS 534

Query: 238 VESDV--------FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
           +ESD         +A + + F R  + ++   L   + F+ +  +  +LL      G+++
Sbjct: 535 MESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIE 594

Query: 290 SAEVIFSNLPE 300
            A  + S L E
Sbjct: 595 LAAQVASQLLE 605


>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 225/776 (28%), Positives = 359/776 (46%), Gaps = 118/776 (15%)

Query: 10  LHAHILRNG--LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           LHA +++ G     + F+ ++L+ LY+KC  +  A  LF   P  +++SW AI+      
Sbjct: 73  LHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLH--- 129

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                                        R G  E+AL  Y KM  +G  P +  L +V 
Sbjct: 130 ----------------------------TRTGFCEEALFGYIKMQQDGLPPDNFVLPNVL 161

Query: 128 KASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           KA   L  V  G+  H  V+K IGL + +YVA +L+ +Y KCG  + A  VF+EMSE N+
Sbjct: 162 KACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERND 221

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-EGCGVESDVFAQ 245
           VT+ +M+   A+     EA+ +FR M  + V +  V+LS     CA  E  G        
Sbjct: 222 VTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVG-------- 273

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+Q H L +  G E D  L +S+++ Y K G ++ AEV+F N+  + VV+
Sbjct: 274 ---------EGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVT 324

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCG-------------------------------- 333
           WN+++AGY Q     KA+E+   M+  G                                
Sbjct: 325 WNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCV 384

Query: 334 ---FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
              FE D V S  ++    + G +   R +F  +    +  WN ML++ ++     EA+K
Sbjct: 385 KNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALK 444

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF +MQ   V P+  +   ++      G  ++G+   A                      
Sbjct: 445 LFFQMQLESVPPNVVSWNSLI-----FGFFKNGQVAEA---------------------- 477

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
              RN  AE     +   +++ W +M++GL  N     A M F++M+   + P   S  +
Sbjct: 478 ---RNMFAEMCSSGVMP-NLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITS 533

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
            LS C  ++    GR +H  + +      I + +++++MY KCG + GA+  F M   K 
Sbjct: 534 ALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKE 593

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
              +N MI  YA +G   EA+ L+K M   G+ PD IT  ++L+ACSH GL+  G+++F 
Sbjct: 594 LYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFK 653

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
            M  +  ++P  +HY C++  L   G   EA   I  MP   D  I   LL++C  + ++
Sbjct: 654 YMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPSHPDAHILGSLLTACGQNNDI 713

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LA   A+ L +LDP NS  Y  L+N+Y+++G+WD +  +R LM E  + K P  S
Sbjct: 714 ELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKWDKVSNLRGLMKEKGLRKIPGCS 769



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 265/516 (51%), Gaps = 54/516 (10%)

Query: 7   GKLLHAHILRN-GLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK +HA +++  GL +  ++   L+++Y KC                             
Sbjct: 173 GKGVHAFVVKTIGLKECVYVATSLVDMYGKCGA--------------------------- 205

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               +E A K+FDEM ERN V+WN+++    +NG+ ++A+ V+ +M  +G   T + L+ 
Sbjct: 206 ----VEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSG 261

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
            F A      V  GR+ HGL +  GL+ +  + +++++ Y K G  + A  VF  M+  +
Sbjct: 262 FFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKD 321

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+  +++G A+   V +ALEM  +M  + +  D V+LS++L V A             
Sbjct: 322 VVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAAD------------ 369

Query: 246 SDNKFSRN-VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                +R+ V G + H   +K  FE D+ +S+ ++DMYAK G MD A  +FS + ++ +V
Sbjct: 370 -----TRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIV 424

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
            WN M+A   ++  S +A++L  +M+     P+ V+  +++    ++G +   R MF  M
Sbjct: 425 LWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEM 484

Query: 365 PS----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
            S    P++ +W  M+S   Q+     A+ +FREMQ  G++P+  ++   LS C +M +L
Sbjct: 485 CSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALL 544

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
           + G+ +H   ++       ++ + ++ +Y+KC   + A+ VF      ++  +N+MI+  
Sbjct: 545 KHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAY 604

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
           + +    EA + FKQM +  + P   +  +VLS+C+
Sbjct: 605 ASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACS 640



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 166/348 (47%), Gaps = 23/348 (6%)

Query: 363 SMPSPSVSSWNAMLSSYSQSENH---KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           S P  +++     L+ +S    H   +EA+    +M    +         +L  C     
Sbjct: 7   SHPPQTLTPNQFSLTHFSSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERA 66

Query: 420 LESGKQVHAASLKTASH--IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
           L    Q+HA  +K      ++++V S L+ +Y+KC  +E A R+F   P  ++  W ++I
Sbjct: 67  LPLALQLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAII 126

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GY 536
              +      EA   + +M+Q+ + P  F    VL +C  L     G+ VHA + K  G 
Sbjct: 127 GLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGL 186

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
              ++V ++L++MY KCG +  A + FD M  +N VTWN M+  YAQNG   EA+R++++
Sbjct: 187 KECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFRE 246

Query: 597 MIASGVKPDDITFVAILTACSHS-----GLVDVGVEIFNSMQLDHGV-EPILDHYTCMID 650
           M   GV+   +      TAC++S     G    G+ +   ++LD+ +   I++ Y     
Sbjct: 247 MRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYF---- 302

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
              + G   EAE++   M  K D V W ++++    +A   + ++A E
Sbjct: 303 ---KVGLIEEAEVVFRNMAVK-DVVTWNLVVAG---YAQFGMVEKALE 343



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 157/346 (45%), Gaps = 56/346 (16%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G   HA+ ++N    D  + + +I++Y+KC     A+ +F  +  KDI  WN +L+A 
Sbjct: 374 VLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAAC 433

Query: 65  CKSDDLEFAYKLFDEMP----ERNVVSWNNLI---------------------------- 92
            +      A KLF +M       NVVSWN+LI                            
Sbjct: 434 AEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNL 493

Query: 93  -------SALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGL 145
                  S LV+NG    A+ V+ +M + G  P  +++ S     T++  ++HGR  HG 
Sbjct: 494 ITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGY 553

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
           V++  L ++I++  +++ +YAKCG    A  VF+  S      + AM+S  A   +  EA
Sbjct: 554 VMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREA 613

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCA-----REGCGVESDVFAQSDNKFSRNVHGQQVH 260
           L +F+ M ++ +  D ++L+SVL  C+     +EG  V   + ++   K S   +G  V 
Sbjct: 614 LVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVK 673

Query: 261 CLT------------IKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
            L             + +    D H+  SLL    +N D++ A+ I
Sbjct: 674 LLANDGQLDEALRTILTMPSHPDAHILGSLLTACGQNNDIELADYI 719


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 195/642 (30%), Positives = 342/642 (53%), Gaps = 58/642 (9%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H L++  G  ++I+++  L++LYA  G    +   F+++ + +   + +M+S        
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHF 198

Query: 203 VEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
            EA+  F +L++   +  D  +   VL     + CG   D              G+++HC
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVL-----KACGTLVD--------------GRKIHC 239

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
              KLGF+ ++ ++ SL+ MY++ G    A  +F ++P R + SWN MI+G  Q   + +
Sbjct: 240 WAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 299

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------------------ 357
           A+++L  M+  G + + VT +++L  C + GDI T                         
Sbjct: 300 ALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALIN 359

Query: 358 -----------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
                      R+ F  M    V SWN+++++Y Q+++   A   F +MQ  G +PD  T
Sbjct: 360 MYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLT 419

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYV-ASGLIGIYSKCQRNELAERVFHRI 465
           L  + S  A     ++ + VH   ++    +++ V  + ++ +Y+K    + A +VF  I
Sbjct: 420 LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII 479

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQFSFATVLSSCAKLSSSFQG 524
           P  D++ WN++I G + N L  EA   +K M +  E+ P Q ++ ++L + A + +  QG
Sbjct: 480 PVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 539

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
            ++H ++ K     D+FV + LI++Y KCG +  A   F  +  +++VTWN +I  +  +
Sbjct: 540 MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH 599

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G+ ++ ++L+ +M+  GVKPD +TFV++L+ACSHSG V+ G   F  MQ ++G++P L H
Sbjct: 600 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKH 658

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y CM+D LGRAG+   A   I +MP + D  IW  LL +CR+H N+ L K A++ LF +D
Sbjct: 659 YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 718

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            KN   Y LL+NIY+++G+W+ +  VR L  E  + K P +S
Sbjct: 719 SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 760



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 165/656 (25%), Positives = 295/656 (44%), Gaps = 122/656 (18%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LHA ++  G     F+  RL+ LY+                                 
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLG------------------------------ 165

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALS-VYNKMSNEGFVPTHITLASV 126
            D+  +   FD++P+++V +WN++ISA V NG   +A+   Y  +      P   T   V
Sbjct: 166 -DVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPV 224

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L+D   GR+ H    K+G   N++VA +L+ +Y++ G+T  A  +F++M   + 
Sbjct: 225 LKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDM 281

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++ AM+SGL +     +AL++   M  + + ++ V++ S+L VC + G     D+    
Sbjct: 282 GSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLG-----DIST-- 334

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                       +H   IK G E DL +SN+L++MYAK G+++ A   F  +    VVSW
Sbjct: 335 ---------AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSW 385

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
           N +IA Y Q      A     +M+  GF+PD +T +++     +S D K  R        
Sbjct: 386 NSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMR 445

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                       ++F+ +P   V SWN +++ Y+Q+    EAI+
Sbjct: 446 RGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIE 505

Query: 391 LFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +++ M + + + P++ T   IL + A +G L+ G ++H   +KT  H+D +VA+ LI +Y
Sbjct: 506 VYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVY 565

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            KC R   A  +F+++P+   V WN++I+   ++    +    F +M    + P   +F 
Sbjct: 566 GKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFV 625

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           ++LS+C+      +G+     +++ G      +  +L    C                  
Sbjct: 626 SLLSACSHSGFVEEGKWCFRLMQEYG------IKPSLKHYGC------------------ 661

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
                  M+    + GY + A    KDM    ++PD   + A+L AC   G +++G
Sbjct: 662 -------MVDLLGRAGYLEMAYDFIKDM---PLQPDASIWGALLGACRIHGNIELG 707



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 228/471 (48%), Gaps = 47/471 (9%)

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +H L +  G    + +S  L+++YA  GD+  +   F  +P++ V +WN MI+ Y     
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197

Query: 319 STKAIELLQR-----------------MKSC----------------GFEPDEVTSINML 345
             +AI    +                 +K+C                GF+ +   + +++
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLI 257

Query: 346 VACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
               R G     R +FD MP   + SWNAM+S   Q+ N  +A+ +  EM+  G+K +  
Sbjct: 258 HMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFV 317

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T+  IL  C  +G + +   +H   +K     D +V++ LI +Y+K    E A + F ++
Sbjct: 318 TVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
              D+V WNS+IA    N   + A  FF +M+ N   P   +  ++ S  A+       R
Sbjct: 378 FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSR 437

Query: 526 QVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
            VH  I + G++  D+ +G+A+++MY K G +  A + F+++  K+ ++WN +I GYAQN
Sbjct: 438 SVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQN 497

Query: 585 GYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVDVGVEIF-----NSMQLDHGV 638
           G   EA+ +YK M     + P+  T+V+IL A +H G +  G++I       ++ LD  V
Sbjct: 498 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFV 557

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
                  TC+ID  G+ G   +A  L  ++P ++  V W  ++S   +H +
Sbjct: 558 A------TCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHGH 601



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 198/422 (46%), Gaps = 56/422 (13%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           L+H +++++GL  D F+ N LI +Y+K  N                              
Sbjct: 337 LIHLYVIKHGLEFDLFVSNALINMYAKFGN------------------------------ 366

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
            LE A K F +M   +VVSWN++I+A  +N     A   + KM   GF P  +TL S+  
Sbjct: 367 -LEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLAS 425

Query: 129 ASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
                 D ++ R  HG +++ G L +++ + NA++ +YAK G    A  VFE +   + +
Sbjct: 426 IVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVI 485

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           ++  +++G A+     EA+E++++M   K +  +  +  S+L   A  G   +       
Sbjct: 486 SWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQ------- 538

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G ++H   IK     D+ ++  L+D+Y K G +  A  +F  +P+ S V+W
Sbjct: 539 ---------GMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTW 589

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N +I+ +G    + K ++L   M   G +PD VT +++L AC  SG ++ G+  F  M  
Sbjct: 590 NAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE 649

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
               PS+  +  M+    ++   + A    ++M    ++PD +    +L +C   G +E 
Sbjct: 650 YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMP---LQPDASIWGALLGACRIHGNIEL 706

Query: 423 GK 424
           GK
Sbjct: 707 GK 708



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 6/175 (3%)

Query: 527 VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           +HA +   G V  IF+ + L+ +Y   GD+  +R  FD +  K+   WN MI  Y  NG+
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197

Query: 587 GDEAVR-LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
             EA+   Y+ ++ S ++PD  TF  +L AC    LVD G +I +      G +  +   
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC--GTLVD-GRKI-HCWAFKLGFQWNVFVA 253

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
             +I    R G    A  L D+MP +D    W  ++S    + N   A    +E+
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFRDMGS-WNAMISGLIQNGNAAQALDVLDEM 307



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 40/224 (17%)

Query: 3   AHVA----GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           AHV     G  +H  +++  L  D F+   LI++Y KC     A  LF ++P +   +WN
Sbjct: 531 AHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWN 590

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
           AI+S        E   KLF E                               M +EG  P
Sbjct: 591 AIISCHGIHGHAEKTLKLFGE-------------------------------MLDEGVKP 619

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
            H+T  S+  A +    VE G+ C  L+ + G+  ++     ++ L  + G+ + A    
Sbjct: 620 DHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFI 679

Query: 179 EEMS-EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDS 221
           ++M  +P+   + A++       R+   +E+ +    +   +DS
Sbjct: 680 KDMPLQPDASIWGALLGAC----RIHGNIELGKFASDRLFEVDS 719


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 199/632 (31%), Positives = 322/632 (50%), Gaps = 120/632 (18%)

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
           +DS   S +L  CAR          ++S    SR      VH   IK  F ++  + N L
Sbjct: 17  LDSSPFSKLLNQCAR----------SRSARDTSR------VHACIIKSPFASETFIQNRL 60

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNV------------------------------ 308
           +D+Y K G +D A  +F  + ER++ SWN                               
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120

Query: 309 -MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------- 360
            MI+G+ Q  +  +A+    +M   GF  +E +  + L AC    D+K G ++       
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 361 ----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                       FD M   S  SWN++++ Y Q+    EA+K+F
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV-ASGLIGIYSK 451
            EM   GV+PD  TLA ++S+CA +  ++ G+Q+HA  +K     ++ +  + L+ +Y+K
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 452 CQRNELAERVFHRIP-------------------------------ELDIVCWNSMIAGL 480
           C R   A  +F  +P                                 D++ WN++IAG 
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV--- 537
           + N  + EA + F+ +++  ++PT ++F  +L++CA L+    GRQ H+ + K G+    
Sbjct: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420

Query: 538 ---NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
              +D+FVG++LI+MY KCG +    + F  M  K+ V+WN MI GYAQNG+G++A+ ++
Sbjct: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
             M+ SG  PD +T + +L ACSH+GL+D G   F SM   HG+ P+ DHYTCM+D LGR
Sbjct: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           AG+  EA+ LI+EM  + D ++W  LL++C++H N++L +   ++L  +DP+NS PY LL
Sbjct: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +N+Y+    W ++  VR+LM +  +VK P  S
Sbjct: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCS 632



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 180/619 (29%), Positives = 301/619 (48%), Gaps = 101/619 (16%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA I+++    +TF+ NRLI++Y KC     A+ LFD+M  ++I+SWN+I+ A  KS  
Sbjct: 41  VHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGF 100

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           L+ A  +F++MP+ +  SWN++IS   ++G  ++AL  + +M   GF+    +  S   A
Sbjct: 101 LDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSA 160

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              L D++ G + H LV +     ++Y+ +AL+ +Y+KCG  ++A  VF+EM+  + V++
Sbjct: 161 CAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSW 220

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            ++++   +   V EAL++F  MI+  V  D V+L+SV+  CA                 
Sbjct: 221 NSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACA----------------T 264

Query: 250 FSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
            S    GQQ+H   +K   F  DL L N+LLDMYAK   ++ A +IF  +P RSVVS   
Sbjct: 265 ISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETS 324

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPS 368
           M++GY                                    ++  +K  R MF +M    
Sbjct: 325 MVSGYA-----------------------------------KASKVKVARYMFSNMMVKD 349

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
           V +WNA+++  +Q+  ++EA+ LFR ++   V P   T   +L++CA +  L+ G+Q H+
Sbjct: 350 VITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHS 409

Query: 429 ASLKTASHI------DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
             LK           D +V + LI +Y KC   E   RVF  + E D V WN+MI G + 
Sbjct: 410 HVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQ 469

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           N    +A   F +M ++   P   +   VL +C+           HA +  +G       
Sbjct: 470 NGFGNKALEVFCKMLESGEAPDHVTMIGVLCACS-----------HAGLLDEG------- 511

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVT-----WNEMIHGYAQNGYGDEAVRLYKDM 597
                            R +F  M  ++ +      +  M+    + GY +EA  L ++M
Sbjct: 512 -----------------RYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 554

Query: 598 IASGVKPDDITFVAILTAC 616
               ++PD I + ++L AC
Sbjct: 555 ---SMQPDAIVWGSLLAAC 570



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 208/451 (46%), Gaps = 69/451 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H+ + R+    D ++ + L+++YSKC     AQ +FD+M  +   SWN+       
Sbjct: 170 GSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNS------- 222

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LI+   +NG  ++AL ++ +M   G  P  +TLASV
Sbjct: 223 ------------------------LITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASV 258

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A   +  ++ G++ H  V+K    +N + + NALL +YAKC     A  +F+ M   +
Sbjct: 259 VSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRS 318

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V+ T+M+SG AK  +V  A  MF  M+ K    D ++ ++++  C + G   E+ +  +
Sbjct: 319 VVSETSMVSGYAKASKVKVARYMFSNMMVK----DVITWNALIAGCTQNGENEEALILFR 374

Query: 246 ------------------------SDNKFSRNVHGQQV-HCLTIKLGFEADLHLSNSLLD 280
                                   +D +  R  H   + H    + G ++D+ + NSL+D
Sbjct: 375 LLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLID 434

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MY K G +++   +F ++ E+  VSWN MI GY Q     KA+E+  +M   G  PD VT
Sbjct: 435 MYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVT 494

Query: 341 SINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREM 395
            I +L AC  +G +  GR  F SM +     P    +  M+    ++   +EA  L  EM
Sbjct: 495 MIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 554

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
               ++PD      +L++C     ++ G+ V
Sbjct: 555 S---MQPDAIVWGSLLAACKVHRNIQLGEYV 582



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 83/153 (54%), Gaps = 7/153 (4%)

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
           K ++ + ++     F+ +L+ CA+  S+    +VHA I K  + ++ F+ + LI++Y KC
Sbjct: 8   KHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKC 67

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +  AR+ FD M  +N  +WN +I  + ++G+ D+AV +++ M     + D  ++ +++
Sbjct: 68  GCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKM----PQVDQCSWNSMI 123

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
           +     G  D  +  F  M   HG   +++ Y+
Sbjct: 124 SGFEQHGRFDEALVYFAQM---HGHGFLVNEYS 153



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 55/228 (24%)

Query: 7   GKLLHAHILRNGLF------DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           G+  H+H+L++G         D F+ N LI++Y KC +                      
Sbjct: 404 GRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGS---------------------- 441

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
                    +E   ++F  M E++ VSWN +I    +NG   KAL V+ KM   G  P H
Sbjct: 442 ---------VENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDH 492

Query: 121 ITLASVFKASTALLDVEHGRRC-------HGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
           +T+  V  A +    ++ GR         HGL+      K+ Y    ++ L  + G+ + 
Sbjct: 493 VTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPL----KDHY--TCMVDLLGRAGYLEE 546

Query: 174 AVPVFEEMS-EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           A  + EEMS +P+ + + ++++      +V   +++   +++K + +D
Sbjct: 547 AKNLIEEMSMQPDAIVWGSLLAAC----KVHRNIQLGEYVVKKLLEVD 590


>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
 gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
          Length = 683

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 195/624 (31%), Positives = 314/624 (50%), Gaps = 55/624 (8%)

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK---AV 217
           LLS YA  G    A  VF+    P+  ++  M+  L + +R  EA+ + + M R+     
Sbjct: 70  LLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPE 129

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
           + D   LS  L  C R            +D  +     G ++HC  +K+G  AD  + NS
Sbjct: 130 AQDDFVLSLALKACIRS-----------ADYGY-----GTRLHCDAVKVG-GADGFVMNS 172

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L+DMYAK GD++ A  +F  +P R+VVSW  M++G  Q   +   + L  +M+     P 
Sbjct: 173 LVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPS 232

Query: 338 EVTSINMLVAC-----------------------------------VRSGDIKTGREMFD 362
           E T   ++ AC                                   V+ G+++  + +FD
Sbjct: 233 EYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFD 292

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            +    +  W  M+  Y+Q+ N  +A++LF + +F  + P+  T+A +LS+ A +  L  
Sbjct: 293 ELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSL 352

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           G+ +H  ++K        V + L+ +Y+KCQ    A R+F  I   D+V WNSM++G + 
Sbjct: 353 GRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAE 412

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           N++  +A M FKQM      P   S    LS+   L     G+  H    K  ++++I+V
Sbjct: 413 NNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYV 472

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            +AL+ +Y KCGD+  AR+ FD M+ +N+VTW  MI GY   G    ++ L+ +M+  GV
Sbjct: 473 STALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGV 532

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
            P+D+ F +IL+ CSH+G+V      F+SM     + P + HY CM+D L RAG+  EA 
Sbjct: 533 HPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEAL 592

Query: 663 MLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
             ID MP + D  +W   L  C LH+ ++  + A + +  L P+    Y L++N+Y+S G
Sbjct: 593 EFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNG 652

Query: 723 RWDDLRAVRELMSENCIVKDPAYS 746
            W+  +A+R  M E  +VK P YS
Sbjct: 653 MWEKSQAIRRWMQEKGLVKLPGYS 676



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 226/476 (47%), Gaps = 57/476 (11%)

Query: 48  KMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSV 107
           K+   D +  N+++    K+ DLE A K+F+ +P RNVVSW +++S  V+NG     L +
Sbjct: 161 KVGGADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLL 220

Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
           +NKM  +   P+  T+A+V  A +AL+ +  GR  HG VIK GL  N +++ ALL +Y K
Sbjct: 221 FNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVK 280

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
           CG  + A  VF+E+S  + V +T M+ G  +    ++AL +F       +  +SV++++V
Sbjct: 281 CGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATV 340

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           L   A+             D    R++HG     + +KLG      + N+L+DMYAK   
Sbjct: 341 LSASAQ-----------LRDLSLGRSIHG-----IAVKLGLVEYTVVVNALVDMYAKCQA 384

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           +  A  IF ++  + VV+WN M++GY +      A+ L ++M   G  PD ++ ++ L A
Sbjct: 385 VSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSA 444

Query: 348 CV-----------------------------------RSGDIKTGREMFDSMPSPSVSSW 372
            V                                   + GD+ + R +FD M   +  +W
Sbjct: 445 SVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTW 504

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH---AA 429
            AM+  Y    +   +I LF EM   GV P+      ILS+C+  G++ + K+     A 
Sbjct: 505 CAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQ 564

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS 484
                  + +Y    ++ + ++    E A      +P + D   W + + G  L+S
Sbjct: 565 HFNITPSMKHYAC--MVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHS 618



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 209/443 (47%), Gaps = 39/443 (8%)

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL---LQR 328
           L     LL  YA  GD+ SA ++F   P     S+ VM+    Q  +  +A+ L   ++R
Sbjct: 64  LRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRR 123

Query: 329 MKSCGFEPDEVTSINMLVACVRS----------------------------------GDI 354
            + C    D+      L AC+RS                                  GD+
Sbjct: 124 RRPCPEAQDDFVLSLALKACIRSADYGYGTRLHCDAVKVGGADGFVMNSLVDMYAKAGDL 183

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +  R++F+ +P  +V SW +MLS   Q+    + + LF +M+   V P   T+A ++++C
Sbjct: 184 ECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITAC 243

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           +A+  L  G+ +H + +K     ++++++ L+ +Y KC   E A+ VF  +  +D+V W 
Sbjct: 244 SALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWT 303

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           +MI G + N   ++A   F   +   + P   + ATVLS+ A+L     GR +H    K 
Sbjct: 304 TMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKL 363

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G V    V +AL++MY KC  +  A + F  +  K+ V WN M+ GYA+N   ++A+ L+
Sbjct: 364 GLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLF 423

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           K M   G  PD I+ V  L+A    G + +G + F+   + H     +   T +++   +
Sbjct: 424 KQMSLKGPSPDAISVVHALSASVCLGDLLIG-KSFHGYAVKHAFLSNIYVSTALLNLYNK 482

Query: 655 AGHFHEAEMLIDEMPCKDDPVIW 677
            G    A  + DEM  ++  V W
Sbjct: 483 CGDLPSARRVFDEMNDRNS-VTW 504



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 200/424 (47%), Gaps = 55/424 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +++ GL  ++F+   L+++Y KC                              
Sbjct: 252 GRWMHGSVIKQGLMSNSFISAALLDMYVKCG----------------------------- 282

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             +LE A  +FDE+   ++V W  +I    +NG    AL ++        VP  +T+A+V
Sbjct: 283 --ELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATV 340

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             AS  L D+  GR  HG+ +K+GL +   V NAL+ +YAKC     A  +F  +S  + 
Sbjct: 341 LSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDV 400

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + +M+SG A+ +   +AL +F+ M  K  S D++S+   L      G     D+    
Sbjct: 401 VAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLG-----DLLI-- 453

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+  H   +K  F +++++S +LL++Y K GD+ SA  +F  + +R+ V+W
Sbjct: 454 ---------GKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTW 504

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             MI GYG +  S  +I+L   M   G  P++V   ++L  C  +G +   +  FDSM  
Sbjct: 505 CAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQ 564

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               +PS+  +  M+   +++ N +EA++    M    ++ D +     L  C     L+
Sbjct: 565 HFNITPSMKHYACMVDVLARAGNLEEALEFIDNMP---MQADTSVWGAFLHGCELHSRLQ 621

Query: 422 SGKQ 425
            G++
Sbjct: 622 FGEE 625


>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 593

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 190/577 (32%), Positives = 301/577 (52%), Gaps = 54/577 (9%)

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
           ++ A  +F+ +  P     +  +S L++     + L+ F  M RK   + S  +  V   
Sbjct: 20  SRAARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKS 79

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CA                  + +  G+QVHC  +  G   D+ +  +L+D YAKNGDM+S
Sbjct: 80  CALT----------------ASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMES 123

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A   F  +P +  +  N +I GY                                    +
Sbjct: 124 AVSAFDEMPVKDPIPINCLITGYS-----------------------------------K 148

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
           +GD+   R +FD M   + +SWN+M++ Y+     +EA+ LF  M   G +P+  T+  +
Sbjct: 149 AGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNAITITSV 208

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAERVFHRIPELD 469
            S CA  G L++GK+V    L     + N +  + L+ +Y KC+  + A R F R+ + D
Sbjct: 209 FSICAKSGDLDTGKRVR--DLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQRD 266

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W++MIAG + N   +E+   F++M+  +  P + +   V+S+CA+L S     Q+  
Sbjct: 267 VVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGN 326

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
             E        ++GSALI+MY +CG +  AR  F  M  K  +TWN MI G A NG+ ++
Sbjct: 327 YAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAED 386

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+ LY+ M  +GV+P++ITFVA+L AC+H+GLVD G+  F  M+ +H V P ++H  C++
Sbjct: 387 AISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIV 446

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
           D L ++G   EA   I +M  + + VIW  LLSSCR HA+V LAK A+ +L  ++P NS+
Sbjct: 447 DLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSS 506

Query: 710 PYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            Y LL+NIY+  G W D R +R+LM    + K  AYS
Sbjct: 507 IYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYS 543



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 214/423 (50%), Gaps = 25/423 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H L  GL  D F+   L++ Y+K  +  SA   FD+MP KD    N +++   K
Sbjct: 89  GRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPINCLITGYSK 148

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           + D++ A +LFD M  R   SWN++I+     G   +AL+++++M +EG  P  IT+ SV
Sbjct: 149 AGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNAITITSV 208

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F       D++ G+R   L+ +  L +N+ V  AL+ +Y KC     A   F+ MS+ + 
Sbjct: 209 FSICAKSGDLDTGKRVRDLIGEDDL-QNVIVHTALMEMYVKCRAIDDARREFDRMSQRDV 267

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V ++ M++G A+  R +E+LE+F  M       + V+L  V+  CA+ G    SD   + 
Sbjct: 268 VAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLG----SDELVEQ 323

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
              ++ N    Q   LT  LG        ++L+DMY + G +  A  +FS + ++ V++W
Sbjct: 324 IGNYAEN----QRLPLTSYLG--------SALIDMYTRCGHVGRARSVFSRMEQKGVITW 371

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N MI G      +  AI L ++M   G +P+E+T + +L AC  +G +  G   F+ M  
Sbjct: 372 NSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKR 431

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               SP V     ++    +S    EA K   +M+   V+P+      +LSSC A   +E
Sbjct: 432 EHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDME---VEPNAVIWTTLLSSCRAHADVE 488

Query: 422 SGK 424
             K
Sbjct: 489 LAK 491



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 145/610 (23%), Positives = 253/610 (41%), Gaps = 152/610 (24%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG-FVPTHITLASVFKAST 131
           A  LFD +P       +  +S+L R       L  ++ M  +G +VP+   +  VFK+  
Sbjct: 23  ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSG-CVPLVFKSCA 81

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
                  GR+ H   +  GL  +++V  AL+  YAK G  + AV  F+EM   + +    
Sbjct: 82  LTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPINC 141

Query: 192 MMSGLAKTDRV-------------------------------VEALEMFRLMIRKAVSID 220
           +++G +K   V                                EAL +F  M+ +    +
Sbjct: 142 LITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPN 201

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH---LSNS 277
           +++++SV  +CA+ G     D+      K  R++ G            E DL    +  +
Sbjct: 202 AITITSVFSICAKSG-----DL---DTGKRVRDLIG------------EDDLQNVIVHTA 241

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L++MY K   +D A   F  + +R VV+W+ MIAGY Q  +  +++EL +RMK+    P+
Sbjct: 242 LMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPN 301

Query: 338 EVTSINMLVAC-----------------------------------VRSGDIKTGREMFD 362
           EVT + ++ AC                                    R G +   R +F 
Sbjct: 302 EVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFS 361

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            M    V +WN+M+   + +   ++AI L+ +M   GV+P+  T   +L++C   G+++ 
Sbjct: 362 RMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQ 421

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL-AERVFHRIPELDIVCWNSMIAGLS 481
           G                      +  + + +R  L + +V H    +D++C +    GL 
Sbjct: 422 G----------------------MAFFEEMKREHLVSPQVEHCACIVDLLCKS---GGL- 455

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC--------AKLSSSFQGRQVHAQIEK 533
                 EA+ F   M   E+ P    + T+LSSC        AKL+S    R++ A +E 
Sbjct: 456 -----WEAYKFICDM---EVEPNAVIWTTLLSSCRAHADVELAKLAS----RKLLA-MEP 502

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT-----VTWNEM---IHGY-AQN 584
           D   + I+V   L  +Y   G    AR+  D+M  KN       +W ++   +H +  Q+
Sbjct: 503 DN--SSIYV--LLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQD 558

Query: 585 GYGDEAVRLY 594
            Y   +  +Y
Sbjct: 559 TYHPRSAEIY 568


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 189/629 (30%), Positives = 324/629 (51%), Gaps = 56/629 (8%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KNI+  N +LS Y+  G    A  +F      N  T+T MM   A   R  +AL +FR M
Sbjct: 72  KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
           + + V  D V++++VL +    GC V S                  +H   IK G +  +
Sbjct: 132 LGEGVIPDRVTVTTVLNL---PGCTVPS------------------LHPFAIKFGLDTHV 170

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            + N+LLD Y K+G + +A  +F  + ++  V++N M+ G  ++   T+A++L   M+  
Sbjct: 171 FVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRA 230

Query: 333 GFEPDEVTSINMLVACVRSGDIKTG----------------------------------- 357
           G      T  ++L        +  G                                   
Sbjct: 231 GIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDM 290

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R +FD MP     S+N ++++Y+ ++     ++LFREMQ  G        A +LS   ++
Sbjct: 291 RRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSL 350

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
             +  GKQ+HA  +      ++ + + LI +YSKC   + A+  F    E   + W ++I
Sbjct: 351 PDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALI 410

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            G   N    EA   F  MR+  + P + +F++++ + + L+    GRQ+H+ + + GY 
Sbjct: 411 TGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK 470

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           + +F GS L++MY KCG +  A + FD M  +N+++WN +I  YA  G    A+++++ M
Sbjct: 471 SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGM 530

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           +  G  PD +TF+++L ACSH+GL D  ++ F+ M+  + + P  +HY C+ID LGR G 
Sbjct: 531 LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGC 590

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
           F + + ++ EMP K DP+IW  +L SCR+H N  LA+ AA++LF ++P ++ PY +L+NI
Sbjct: 591 FSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNI 650

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y+  G+W+D   V+++M +  + K+  YS
Sbjct: 651 YARAGQWEDAACVKKIMRDRGVRKESGYS 679



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 253/542 (46%), Gaps = 56/542 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           L A +++ G    T+  N  +       + H A+ +FD+MPHK+I+S N ILSA   S D
Sbjct: 30  LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGD 89

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           L  A  LF   P RN  +W  ++ A    G    ALS++  M  EG +P  +T+ +V   
Sbjct: 90  LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNL 149

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
               +        H   IK GLD +++V N LL  Y K G    A  VF EM + + VT+
Sbjct: 150 PGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTY 204

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            AMM G +K     +AL++F  M R  +     + SS+L V A                 
Sbjct: 205 NAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAA----------------G 248

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
            +  + G QVH L ++     ++ ++NSLLD Y+K   +D    +F  +PER  VS+NV+
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------- 360
           IA Y     +   + L + M+  GF+   +    ML       D+  G+++         
Sbjct: 309 IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 368

Query: 361 --------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                     F +    S  SW A+++ Y Q+  H+EA++LF +
Sbjct: 369 ASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSD 428

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+  G++PDR T + I+ + +++ ++  G+Q+H+  +++      +  S L+ +Y+KC  
Sbjct: 429 MRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGC 488

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A R F  +PE + + WN++I+  +       A   F+ M      P   +F +VL++
Sbjct: 489 LDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 548

Query: 515 CA 516
           C+
Sbjct: 549 CS 550



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 155/600 (25%), Positives = 263/600 (43%), Gaps = 95/600 (15%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           ++  N +L A CK   L  A ++F EM +++ V++N ++    + GL  +AL ++  M  
Sbjct: 170 VFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRR 229

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
            G   TH T +S+   +  +  +  G + H LV++     N++V N+LL  Y+KC     
Sbjct: 230 AGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDD 289

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
              +F+EM E + V++  +++  A        L +FR M +       +  +++L V   
Sbjct: 290 MRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSV--- 346

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
              G   DV             G+Q+H   + LG  ++  L N+L+DMY+K G +D+A+ 
Sbjct: 347 --AGSLPDVHI-----------GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS 393

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
            FSN  E+S +SW  +I GY Q  Q  +A++L   M+  G  PD  T  +++ A      
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 453

Query: 354 IKTGREM-----------------------------------FDSMPSPSVSSWNAMLSS 378
           I  GR++                                   FD MP  +  SWNA++S+
Sbjct: 454 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV-----HAASLKT 433
           Y+     K AIK+F  M   G  PD  T   +L++C+  G+ +   +      H  S+  
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISP 573

Query: 434 -----ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
                A  ID     G +G +S+ Q+  L E  F    + D + W S+     L+S  I 
Sbjct: 574 WKEHYACVIDTL---GRVGCFSQVQK-MLVEMPF----KADPIIWTSI-----LHSCRIH 620

Query: 489 AFMFFKQMRQNEMY---PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
                 ++  ++++   PT  +   +LS+    +  ++      +I +D  V     G +
Sbjct: 621 GNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRK-ESGYS 679

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
            +E+  K   IY            N +T + MI     +   DE  RLYK+M   G KPD
Sbjct: 680 WVEIKQK---IYS--------FASNDLT-SPMI-----DEIKDELDRLYKEMDKQGYKPD 722



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 197/417 (47%), Gaps = 55/417 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA +LR+    + F+ N L++ YSKC                              
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKC------------------------------ 284

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D L+   +LFDEMPER+ VS+N +I+A   N      L ++ +M   GF    +  A++
Sbjct: 285 -DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATM 343

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              + +L DV  G++ H  ++ +GL     + NAL+ +Y+KCG    A   F   SE + 
Sbjct: 344 LSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSA 403

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TA+++G  +  +  EAL++F  M R  +  D  + SS++                ++
Sbjct: 404 ISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSII----------------KA 447

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            +  +    G+Q+H   I+ G+++ +   + L+DMYAK G +D A   F  +PER+ +SW
Sbjct: 448 SSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISW 507

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N +I+ Y    ++  AI++ + M  CGF PD VT +++L AC  +G      + F  M  
Sbjct: 508 NAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKH 567

Query: 367 P-SVSSWN----AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
             S+S W      ++ +  +     +  K+  EM F   K D      IL SC   G
Sbjct: 568 QYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPF---KADPIIWTSILHSCRIHG 621


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 203/666 (30%), Positives = 339/666 (50%), Gaps = 56/666 (8%)

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           ++TL S  +  T+   ++ G+  H  +   G   NI ++ +L+  Y  C     A  VF+
Sbjct: 3   YVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQ 62

Query: 180 EMSEPNEVT-FTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCG 237
               P +V+ + A++S      R VEAL++F +L     V  D  +   VL  C   G  
Sbjct: 63  TNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG-- 120

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                         R ++G+++H   +K G   D+ + +SL++MYAK      A  +F  
Sbjct: 121 --------------RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDE 166

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR------- 350
            P+R V  WN +I+ Y +  ++  A++   +MK  GFEP+ VT   ++ +C R       
Sbjct: 167 FPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERG 226

Query: 351 ----------------------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                        G ++  +E+F+ +P  +  +WNAM++ YS  
Sbjct: 227 KEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLK 286

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
            + +  I+L   M   G KP   TL  I+ + +    L  GK +H   L+    +D ++ 
Sbjct: 287 GDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFID 346

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
             LI  Y KC     AE +F  I + ++V WN MI+G  +    I+A   +  M+++ + 
Sbjct: 347 VSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVK 406

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVH-AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
           P   +F++ LS+C++L++  +GR++H   I      N+I +G AL++MY KCGD+  AR+
Sbjct: 407 PDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMG-ALLDMYAKCGDVDEARK 465

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F  +  ++ V+W  MI  Y  +G   EA+RL+ +M    V+ D +TF+A+L+ACSH+GL
Sbjct: 466 LFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGL 525

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA-EMLIDEMPCKDDPVIWEVL 680
           VD G   FN M + + ++P ++HY+C+ID LGRAG  HEA E+L      + D  +   L
Sbjct: 526 VDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTL 585

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
            S+C LH N  L  +  + L  +DP + + Y LL+N+Y+S+ +WD++R VR  M E  + 
Sbjct: 586 FSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLK 645

Query: 741 KDPAYS 746
           K P  S
Sbjct: 646 KSPGCS 651



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 147/568 (25%), Positives = 250/568 (44%), Gaps = 95/568 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLF--DKMPHKDIYSWNAILSAQ 64
           GKL+H  I   G   +  L   LI  Y  C++  SA+ +F  +  P  D+  WNA+LSA 
Sbjct: 22  GKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCP-LDVSLWNALLSAY 80

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
             +     A +LFD++                                N    P   T  
Sbjct: 81  TNNFRFVEALQLFDQLN------------------------------CNSYVRPDFYTYP 110

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            V KA   L  V +GRR H  ++K GL  +++V ++L+++YAKC     A+ +F+E  + 
Sbjct: 111 VVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQR 170

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +   + A++S   K  +   AL+ F  M       +SV+ + V+  C R           
Sbjct: 171 DVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTR----------- 219

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G++VH   I+     D  + ++L+DMY K G ++ A+ +F  +P ++ +
Sbjct: 220 -----LLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAI 274

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------ 358
           +WN MI GY  K  S   IELL RM   G +P  +T  +++ A  RS  ++ G+      
Sbjct: 275 TWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYI 334

Query: 359 -----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                         +F ++    V SWN M+S +    NH +A+
Sbjct: 335 LRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQAL 394

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            ++  M+   VKPD  T +  LS+C+ +  L+ G+++H   +      +  V   L+ +Y
Sbjct: 395 HIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMY 454

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC   + A ++FH++P+ D+V W SMI     +    EA   F +M++  +     +F 
Sbjct: 455 AKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFL 514

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            VLS+C+           HA +  +GY+
Sbjct: 515 AVLSACS-----------HAGLVDEGYM 531



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 209/454 (46%), Gaps = 82/454 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G+ +H H+L+ GL  D F+ + L+ +Y+KC                            
Sbjct: 123 IYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKC---------------------------- 154

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
              D    A KLFDE P+R+V  WN +IS   ++G  E AL  ++KM   GF P  +T  
Sbjct: 155 ---DQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFT 211

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            V  + T LL++E G+  H  +I+  +  + +V +AL+ +Y KCG  + A  VFE++   
Sbjct: 212 VVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRK 271

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N +T+ AM++G +        +E+   M  +      ++L+S+              ++A
Sbjct: 272 NAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSI--------------IYA 317

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            S +   R  HG+ +H   ++   + D+ +  SL+D Y K G + SAE IF  + +  VV
Sbjct: 318 SSRSVQLR--HGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVV 375

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           SWNVMI+G+       +A+ +   MK    +PD +T  + L AC                
Sbjct: 376 SWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCI 435

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + GD+   R++F  +P   + SW +M+ +Y       EA+
Sbjct: 436 INHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEAL 495

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +LF EMQ   V+ D  T   +LS+C+  G+++ G
Sbjct: 496 RLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEG 529



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 161/324 (49%), Gaps = 13/324 (4%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  TL   L +C +  +L+ GK +H          +  ++  LIG Y  C     AE VF
Sbjct: 2   DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61

Query: 463 HRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLSS 520
                 LD+  WN++++  + N   +EA   F Q+  N  + P  +++  VL +C  L  
Sbjct: 62  QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              GR++H  + K G + D+FVGS+L+ MY KC     A + FD    ++   WN +I  
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           Y ++G  + A++ +  M   G +P+ +TF  ++++C+    ++ G E+   + ++  +  
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHREL-IERRI-- 238

Query: 641 ILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
           +LD +  + ++D  G+ G    A+ + +++P + + + W  +++   L  + R      E
Sbjct: 239 LLDAFVLSALVDMYGKCGCLEMAKEVFEKIP-RKNAITWNAMITGYSLKGDSR---SCIE 294

Query: 699 ELFRLDPKNSAP--YSLLANIYSS 720
            L R++ + + P   +L + IY+S
Sbjct: 295 LLMRMNDEGTKPTLMTLTSIIYAS 318


>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
 gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
          Length = 810

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 211/717 (29%), Positives = 359/717 (50%), Gaps = 58/717 (8%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           KS  L  A ++F +    + V WN  +S  VRNG    A+ ++  M      P   T + 
Sbjct: 116 KSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSG 175

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A  A  ++  GR  HGLV++   + +++V  +L+++YAKCG    A+  F  M   N
Sbjct: 176 ALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRN 235

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T  ++G  + D  V A+ + R M+R  V+I+  + +S+L  CA             
Sbjct: 236 VVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACA------------- 282

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF---SNLPERS 302
              + S      Q+H + +K     D  +  +L+  Y   G ++ +E +F     +  RS
Sbjct: 283 ---QMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRS 339

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE------VTSIN------------- 343
           +  W+  I+G    +   ++++LL+RM   G  P++       +S+N             
Sbjct: 340 I--WSAFISGV-SNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAI 396

Query: 344 -------MLVACV------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                  +LV         R  +++   ++F+ M      SW AM++ ++   +  EA  
Sbjct: 397 KEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFL 456

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            FR M   G KPD  +L  ILS+C     L  GK+VH  +L+       ++    I +YS
Sbjct: 457 TFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGET-TFINDCFISMYS 515

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KCQ  + A R+F   P  D V W+SMI+G + N    EA   F+ M    +    +  ++
Sbjct: 516 KCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSS 575

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +LS CA ++  F  + +H    K G ++D  V S+L+++Y + G++  +R+ FD +   +
Sbjct: 576 ILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPD 635

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V W  +I GYAQ+G    A+ ++  M+  GV+PD +  V++L+ACS +GLV+ G   FN
Sbjct: 636 LVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFN 695

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM+  +GVEP L HY CM+D LGR+G   EA+  +D MP K D ++W  LL++CR+H + 
Sbjct: 696 SMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDT 755

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            L  R  E   R    +S  ++ L+NI ++ G W+++  +R+ M    + K+P +S+
Sbjct: 756 VLG-RFVENKIREGNYDSGSFATLSNILANSGDWEEVARIRKTMKG--VNKEPGWSM 809



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 160/584 (27%), Positives = 271/584 (46%), Gaps = 71/584 (12%)

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
           K GL  N YV   ++ L AK G  + A+ VF +    + V + A +SG  +      A+E
Sbjct: 97  KDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVE 156

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           MFR M+  +   +S + S  L  CA    G E  V             G+ VH L ++  
Sbjct: 157 MFRDMVWGSCEPNSFTYSGALSACA---AGEELSV-------------GRAVHGLVLRRD 200

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
            E D+ +  SL++MYAK GDM +A   F  +P R+VVSW   IAG+ Q  +   A+ LL+
Sbjct: 201 PEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLR 260

Query: 328 RMKSCGFEPDEVTSINMLVACVRS-----------------------------------G 352
            M   G   ++ T+ ++L+AC +                                    G
Sbjct: 261 EMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFG 320

Query: 353 DIKTGREMFDSMPSPSVSS-WNAMLSSYSQSENHK--EAIKLFREMQFRGVKPDRTTLAI 409
            I+   ++F+   + S  S W+A +S  S   NH    +++L R M  +G++P+    A 
Sbjct: 321 FIELSEKVFEEAGTVSNRSIWSAFISGVS---NHSLLRSVQLLRRMFHQGLRPNDKCYAS 377

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           + SS  +   +E G Q+H++++K        V S L  +YS+C   + + +VF  + E D
Sbjct: 378 VFSSVNS---IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERD 434

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
            V W +M+AG + +   +EAF+ F+ M  +   P   S   +LS+C +     +G++VH 
Sbjct: 435 GVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHG 494

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
              +  Y    F+    I MY KC  +  AR+ FD    K+ V W+ MI GYA NG G+E
Sbjct: 495 HTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEE 553

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF----NSMQLDHGVEPILDHY 645
           A+ L++ M+A+ ++ D     +IL+ C+     D+    +    +   +  G+       
Sbjct: 554 AISLFQLMVAASIRIDSYICSSILSLCA-----DIARPFYCKPLHGYAIKAGILSDQSVS 608

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           + ++    R+G+  ++  + DE+    D V W  ++     H +
Sbjct: 609 SSLVKVYSRSGNMDDSRKVFDEISVP-DLVAWTTIIDGYAQHGS 651



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 216/462 (46%), Gaps = 43/462 (9%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +QV+C   K G   + ++   ++D+ AK+G +  A  +F++    S V WN  ++G  + 
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------------- 360
            +   A+E+ + M     EP+  T    L AC    ++  GR +                
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208

Query: 361 -------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                              F  MP  +V SW   ++ + Q +    A+ L REM   GV 
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            ++ T   IL +CA M ++    Q+H   LKT  ++D  V   LI  Y+     EL+E+V
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKV 328

Query: 462 FHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           F     + +   W++ I+G+S +SL + +    ++M    + P    +A+V SS   ++S
Sbjct: 329 FEEAGTVSNRSIWSAFISGVSNHSL-LRSVQLLRRMFHQGLRPNDKCYASVFSS---VNS 384

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G Q+H+   K+G+++ I VGSAL  MY +C ++  + + F+ M  ++ V+W  M+ G
Sbjct: 385 IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAG 444

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           +A +G+  EA   +++MI  G KPD ++  AIL+AC+    +  G E+       +G   
Sbjct: 445 FATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETT 504

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            ++   C I    +      A  + D  P KD  V+W  ++S
Sbjct: 505 FIND--CFISMYSKCQGVQTARRIFDATPRKDQ-VMWSSMIS 543



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 136/566 (24%), Positives = 245/566 (43%), Gaps = 57/566 (10%)

Query: 50  PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN 109
           P  D++   ++++   K  D+  A + F  MP RNVVSW   I+  V++     A+ +  
Sbjct: 201 PEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLR 260

Query: 110 KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           +M   G      T  S+  A   +  V    + HG+V+K  +  +  V  AL+S Y   G
Sbjct: 261 EMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFG 320

Query: 170 WTKHAVPVFEEMSE-PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           + + +  VFEE     N   ++A +SG++    ++ ++++ R M  + +  +    +SV 
Sbjct: 321 FIELSEKVFEEAGTVSNRSIWSAFISGVSN-HSLLRSVQLLRRMFHQGLRPNDKCYASVF 379

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
                    V S  F            G Q+H   IK GF   + + ++L  MY++  ++
Sbjct: 380 S-------SVNSIEF------------GGQLHSSAIKEGFIHGILVGSALSTMYSRCDNV 420

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
             +  +F  + ER  VSW  M+AG+     S +A    + M   GF+PD V+   +L AC
Sbjct: 421 QDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSAC 480

Query: 349 VRS----------------------------------GDIKTGREMFDSMPSPSVSSWNA 374
            R                                     ++T R +FD+ P      W++
Sbjct: 481 NRPECLLKGKEVHGHTLRVYGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSS 540

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+S Y+ +   +EAI LF+ M    ++ D    + ILS CA +      K +H  ++K  
Sbjct: 541 MISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAG 600

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V+S L+ +YS+    + + +VF  I   D+V W ++I G + +     A   F 
Sbjct: 601 ILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFD 660

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKC 553
            M Q  + P      +VLS+C++     QG      +    G   ++     ++++  + 
Sbjct: 661 LMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRS 720

Query: 554 GDIYGARQFFDMMHGK-NTVTWNEMI 578
           G +  A+ F D M  K + + W+ ++
Sbjct: 721 GRLAEAKYFVDSMPMKPDLMVWSTLL 746



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 135/292 (46%), Gaps = 16/292 (5%)

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           +QV+ A+ K     + YV +G++ + +K  R   A RVF        VCWN+ ++G   N
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
                A   F+ M      P  F+++  LS+CA       GR VH  + +     D+FVG
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           ++L+ MY KCGD+  A + F  M  +N V+W   I G+ Q+     A+ L ++M+ +GV 
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268

Query: 604 PDDITFVAILTACSHSGLVDVGVEIF-----NSMQLDHGV-EPILDHYTCMIDCLGRAGH 657
            +  T  +IL AC+   +V    +I        M LD  V E ++  YT         G 
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNF-------GF 321

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA---NVRLAKRAAEELFRLDPK 706
              +E + +E     +  IW   +S    H+   +V+L +R   +  R + K
Sbjct: 322 IELSEKVFEEAGTVSNRSIWSAFISGVSNHSLLRSVQLLRRMFHQGLRPNDK 373



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 13/197 (6%)

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
           L  L  E   F +        P+QF++   L++CA+  +     QV+    KDG   + +
Sbjct: 46  LARLPAELASFARARAAGRAAPSQFAYGNALAACARAPAPALAEQVYCAAWKDGLSGNAY 105

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           V + ++++  K G +  A + F      + V WN  + G  +NG G  AV +++DM+   
Sbjct: 106 VCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGS 165

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV----EPILDHY--TCMIDCLGRA 655
            +P+  T+   L+AC+    + VG  +       HG+    +P  D +  T +++   + 
Sbjct: 166 CEPNSFTYSGALSACAAGEELSVGRAV-------HGLVLRRDPEYDVFVGTSLVNMYAKC 218

Query: 656 GHFHEAEMLIDEMPCKD 672
           G    A      MP ++
Sbjct: 219 GDMGAAMREFWRMPVRN 235



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 4/108 (3%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LH + ++ G+  D  + + L+++YS+  N   ++ +FD++   D+ +W  I+    + 
Sbjct: 590 KPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQH 649

Query: 68  DDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
              + A  +FD M +  V    V   +++SA  RNGL E+  + +N M
Sbjct: 650 GSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSM 697


>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 220/684 (32%), Positives = 341/684 (49%), Gaps = 57/684 (8%)

Query: 103 KALSVYNKMSNEGFVPTHITLA-SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANAL 161
           +A S Y++M   G   T  TL  S+ KA ++L  V HG+  H  ++K G D      N++
Sbjct: 32  EACSRYHQMKKAGAQLTDPTLVHSILKACSSL-PVRHGKSIHASLLKQGFDSLTSTGNSV 90

Query: 162 LSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDS 221
           L  Y K G    A+ VF+ M   + V++  M+ G        + L  FR     A   + 
Sbjct: 91  LDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNV 150

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDM 281
            +L   +  C   G   E                G ++H   I+ GF     + NSLL M
Sbjct: 151 STLVLAIHACRSLGAMEE----------------GLKMHGYIIRSGFLDIPSVQNSLLSM 194

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVT 340
           YA N DM+ AE +F  + ER V+SW+VMI GY Q  ++  A++L   M S    E D +T
Sbjct: 195 YADN-DMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGIT 253

Query: 341 SINMLVACVRSGDIKTGREM-----------------------------------FDSMP 365
            +++L AC  +GDI  GR +                                   F+ MP
Sbjct: 254 MVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMP 313

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
             +  SWN+++S   ++E H EA+ LF  M   G + D  TL  +L SC         K 
Sbjct: 314 CRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF 373

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +H+  ++    ++ +V + LI  YSKC   ELA ++F R+   D V W++MIAG +    
Sbjct: 374 IHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGK 433

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             EA   F++M Q +  P   +  ++L + +  +   + +  H    + G   ++ VG+A
Sbjct: 434 PDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTA 493

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           +++MY KCG+I  +R+ FD +  KN V+W  MI     NG   +A+ L  +M   G+KP+
Sbjct: 494 ILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPN 553

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            +T +++L+ACSH GLV+ G+  F +M  DHGVEP L+HY+CM+D L RAG  + A  LI
Sbjct: 554 VVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLI 613

Query: 666 DEMP--CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGR 723
           ++MP   +D   +W  LLS+CR   N RL   AA  +  L+P++SA Y L +++Y++ G 
Sbjct: 614 EKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGL 673

Query: 724 WDDLRAVRELMSENCIVKDPAYSL 747
           W D   +R L+    +     YSL
Sbjct: 674 WADAARMRWLVKARGVRVVAGYSL 697



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 258/546 (47%), Gaps = 54/546 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N++L    K+  L+ A  +FD M  R+ VSWN +I   +  G  +K L  + +     F 
Sbjct: 88  NSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFE 147

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   TL     A  +L  +E G + HG +I+ G      V N+LLS+YA     + A  +
Sbjct: 148 PNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEEL 206

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGC 236
           F+EM E + ++++ M+ G  +T     AL++F  M   A + +D +++ SVL  CA  G 
Sbjct: 207 FDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTG- 265

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                     D    R+VHG     + I  G + DL + NS++DMY+K  D +SA   F+
Sbjct: 266 ----------DISMGRSVHG-----VVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFN 310

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------- 348
            +P R+ VSWN +I+G  +  + ++A+ L   M   GF  DEVT +N+L +C        
Sbjct: 311 EMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQ 370

Query: 349 ---VRSGDIKTGRE------------------------MFDSMPSPSVSSWNAMLSSYSQ 381
              + S  I+ G E                        +FD + +    SW+AM++ ++ 
Sbjct: 371 CKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNH 430

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
                EAI LF+EM     KP+  T+  +L + +    L+  K  H  +++     +  V
Sbjct: 431 CGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAV 490

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + ++ +Y+KC    L+ + F +IPE +IV W +MIA   +N L  +A     +M+ + +
Sbjct: 491 GTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGL 550

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGAR 560
            P   +  +VLS+C+      +G      + +D G    +   S +++M  + G +  A 
Sbjct: 551 KPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAM 610

Query: 561 QFFDMM 566
              + M
Sbjct: 611 NLIEKM 616



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 215/453 (47%), Gaps = 84/453 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H +I+R+G  D   + N L+ +Y+                                
Sbjct: 169 GLKMHGYIIRSGFLDIPSVQNSLLSMYA-------------------------------- 196

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLAS 125
            +D+E A +LFDEM ER+V+SW+ +I   V+ G  + AL ++ +M SN       IT+ S
Sbjct: 197 DNDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVS 256

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA     D+  GR  HG+VI  GLD +++V N+++ +Y+KC   + A   F EM   N
Sbjct: 257 VLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRN 316

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ +++SGL +T++  EAL +F  M +     D V+L ++L                Q
Sbjct: 317 TVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLL----------------Q 360

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S   F      + +H + I+ G+E +  + NSL+D Y+K   ++ A  +F  L  +  VS
Sbjct: 361 SCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVS 420

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT--------- 356
           W+ MIAG+    +  +AI L Q M     +P+ VT +++L A   S D+K          
Sbjct: 421 WSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAI 480

Query: 357 --------------------------GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                      R+ FD +P  ++ SW AM+++   +   ++A+ 
Sbjct: 481 RRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALA 540

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           L  EM+  G+KP+  T   +LS+C+  G++E G
Sbjct: 541 LLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEG 573



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 225/458 (49%), Gaps = 58/458 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  ++  GL  D F+ N +I++YSKC                              
Sbjct: 270 GRSVHGVVICRGLDYDLFVGNSIIDMYSKC------------------------------ 299

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            DD E A+K F+EMP RN VSWN++IS LVR     +ALS++  M   GF    +TL ++
Sbjct: 300 -DDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNL 358

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            ++    +D    +  H +VI+ G + N +V N+L+  Y+KC   + A  +F+ +   + 
Sbjct: 359 LQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDT 418

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++AM++G     +  EA+ +F+ M +     + V++ S+L     E   V +D+    
Sbjct: 419 VSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLL-----EAFSVSADL---- 469

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             K S+  HG     + I+ G  A++ +  ++LDMYAK G++  +   F  +PE+++VSW
Sbjct: 470 --KRSKWAHG-----IAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSW 522

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             MIA  G    +  A+ LL  MK  G +P+ VT++++L AC   G ++ G   F++M  
Sbjct: 523 GAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQ 582

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG--I 419
                P +  ++ M+   S++     A+ L  +M  R ++        +LS+C + G   
Sbjct: 583 DHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPER-MRDGAGLWGALLSACRSSGNSR 641

Query: 420 LESGKQVHAASLKTASHIDNYVASGLI---GIYSKCQR 454
           L +G       L+  S    ++AS +    G+++   R
Sbjct: 642 LGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAAR 679


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 220/719 (30%), Positives = 350/719 (48%), Gaps = 115/719 (15%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF-EEMSEPNEVTFTAMMSGLAKTDR 201
           HG ++ +GL   +++ N LL  Y  CG    A  +   +++ PN +T   M++G AK  R
Sbjct: 27  HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86

Query: 202 VVEALEMF-RLMIRKAVSIDS------------VSLSSVLGV--------------CARE 234
           + +A+E+F R+  R   S ++            VSL + L +              CA +
Sbjct: 87  LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 146

Query: 235 GCG-------------VESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-------EADLHL 274
            CG             +     +Q D++ +  +    V C  + L         E  +  
Sbjct: 147 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 206

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
            NS+L  Y K   +D A  +F ++PER VVSWN+M++   Q  +  +A++++  M+S G 
Sbjct: 207 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266

Query: 335 EPDEVTSINMLVACVR-----------------------------------SGDIKTGRE 359
             D  T  + L AC R                                   SG  K  + 
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKG 326

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F+S+   +  +W  ++S + Q     E+++LF +M+   +  D+  LA ++S C +   
Sbjct: 327 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L  G+Q+H+  LK+       V++ LI +Y+KC   + AE +F  + E DIV W SMI  
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITA 446

Query: 480 LSLNSLDIEAFMFFKQMRQN----------------------EMY----------PTQFS 507
            S      +A  FF  M +                        MY          P   +
Sbjct: 447 YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 506

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           + T+   CA L ++  G Q+  +  K G + D  V +A+I MY KCG I  AR+ FD ++
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 566

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            K+ V+WN MI GY+Q+G G +A+ ++ D++  G KPD I++VA+L+ CSHSGLV  G  
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKF 626

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F+ M+  H + P L+H++CM+D LGRAGH  EA+ LID+MP K    +W  LLS+C++H
Sbjct: 627 YFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIH 686

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            N  LA+ AA+ +F LD  +S  Y L+A IY+  G+ DD   +R+LM +  I K+P YS
Sbjct: 687 GNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 745



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 171/626 (27%), Positives = 297/626 (47%), Gaps = 64/626 (10%)

Query: 21  DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEM 80
           DD+ +   L++++ +C     A  LF ++    ++  N++L+   K+  ++ A +LFD M
Sbjct: 171 DDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSM 230

Query: 81  PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           PER+VVSWN ++SAL ++G   +AL +   M ++G      T  S   A   L  +  G+
Sbjct: 231 PERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGK 290

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           + H  VI+     + YVA+AL+ LYAK G  K A  VF  + + N V +T ++SG  +  
Sbjct: 291 QLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYG 350

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
              E++E+F  M  + +++D  +L++++ G C+R    +                 G+Q+
Sbjct: 351 CFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL-----------------GRQL 393

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H L +K G    + +SNSL+ MYAK  ++ SAE IF  + E+ +VSW  MI  Y Q    
Sbjct: 394 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQ---- 449

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
                                           G++   RE FD M   +V +WNAML +Y
Sbjct: 450 -------------------------------VGNVAKAREFFDGMSEKNVITWNAMLGAY 478

Query: 380 SQSENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
            Q    ++ +++++ M     V+PD  T   +   CA +G  + G Q+   ++K    ID
Sbjct: 479 IQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIID 538

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
             VA+ +I +YSKC R   A +VF  +   DIV WN+MI G S + +  +A   F  + +
Sbjct: 539 TSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILK 598

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG----SALIEMYCKCG 554
               P   S+  VLS C+      +G+     +++    ++I  G    S ++++  + G
Sbjct: 599 RGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKR---AHNISPGLEHFSCMVDLLGRAG 655

Query: 555 DIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
            +  A+   D M  K T   W  ++     +G  +E   L    +     PD  +++ + 
Sbjct: 656 HLTEAKDLIDDMPMKPTAEVWGALLSACKIHG-NNELAELAAKHVFELDSPDSGSYMLMA 714

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVE 639
              + +G  D   +I   M+ D G++
Sbjct: 715 KIYADAGKSDDSAQIRKLMR-DKGIK 739



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 165/308 (53%), Gaps = 17/308 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH+  L++G      + N LI +Y+KC+N  SA+ +F  M  KDI SW ++++A  +
Sbjct: 390 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQ 449

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLAS 125
             ++  A + FD M E+NV++WN ++ A +++G EE  L +Y  M +E +V P  +T  +
Sbjct: 450 VGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVT 509

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +FK    L   + G +  G  +K+GL  +  VANA++++Y+KCG    A  VF+ ++  +
Sbjct: 510 LFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKD 569

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM++G ++     +A+E+F  ++++    D +S  +VL  C+  G  V+   F  
Sbjct: 570 IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGL-VQEGKFYF 628

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
              K + N          I  G E   H S  ++D+  + G +  A+ +  ++P +    
Sbjct: 629 DMMKRAHN----------ISPGLE---HFS-CMVDLLGRAGHLTEAKDLIDDMPMKPTAE 674

Query: 306 -WNVMIAG 312
            W  +++ 
Sbjct: 675 VWGALLSA 682



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 61/113 (53%), Gaps = 4/113 (3%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A+  G  +    ++ GL  DT + N +I +YSKC     A+ +FD +  KDI SWNA+++
Sbjct: 519 ANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMIT 578

Query: 63  AQCKSDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKM 111
              +    + A ++FD++ +R    + +S+  ++S    +GL ++    ++ M
Sbjct: 579 GYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMM 631



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           M  TQ +FA  L SC    +    R +H ++   G  + +F+ + L+  Y  CG +  AR
Sbjct: 1   MAVTQ-AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDAR 59

Query: 561 QFF--DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           +    D+ H  N +T N M++GYA+ G   +AV L+  M A  V     ++  +++    
Sbjct: 60  RLLLMDIAH-PNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVA----SWNTLMSGYFQ 114

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM----LIDEMPCKDDP 674
           S    V +E F SM       P      C +   G  G +H   +    ++ +   +DD 
Sbjct: 115 SRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALG-WHSLALQLLAMVQKFDSQDDS 173

Query: 675 VIWEVLLSSCRLHANVRLAKR 695
            +   L+        V LA R
Sbjct: 174 EVAAALVDMFVRCGAVDLASR 194


>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
 gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 209/701 (29%), Positives = 348/701 (49%), Gaps = 68/701 (9%)

Query: 86  VSWNNL-ISALVRNG-LEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           + W NL ++AL R   ++    S+ +  SN  F     +L  + K  ++L      R+ H
Sbjct: 11  LQWRNLTVTALQRTPEIDRTIASIQSISSNPCF-----SLLGICKTVSSL------RKIH 59

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
            L++  GL +++     L+SLY   G  + A  +F+ +  P+  ++  M+      D   
Sbjct: 60  ALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYS 119

Query: 204 EALEMFRLMIRKAVS-IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
           E ++ +   +RK ++  D+V  S VL  C+            ++D        G+++HC 
Sbjct: 120 EIVQFYNTRLRKCLNEYDNVVFSIVLKACSE---------LRETD-------EGRKLHCQ 163

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            +K+G   D  +   L+DMYAK  +++ +  +F  + +R+VV W  MI GY Q     + 
Sbjct: 164 IVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEG 222

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVR-------------------------------- 350
           + L  RM+    E ++ T  +++ AC +                                
Sbjct: 223 LVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDL 282

Query: 351 ---SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
               GDI+    +FD + +  + SW AM+  Y+Q    +EA+KLF + +++ + P+  T 
Sbjct: 283 YFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTT 342

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           + +LS+CA  G L  G+ VH   +K  S  D    + L+ +Y+KC     A  VF  + +
Sbjct: 343 SSVLSACAQTGSLNMGRSVHCLGIKLGSE-DATFENALVDMYAKCHMIGDARYVFETVFD 401

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            D++ WNS+I+G + N    EA   F QMR + +YP   +  +VLS+CA + +   G  +
Sbjct: 402 KDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSL 461

Query: 528 HAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           H    K G ++  ++VG+AL+  Y KCGD   AR  FD M  KNT+TW+ MI GY   G 
Sbjct: 462 HGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGD 521

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
              ++ L+ DM+   ++P+++ F  IL+ACSHSG++  G   FN+M   +   P + HY 
Sbjct: 522 CSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYA 581

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK 706
           CM+D L RAG   EA   I+++P + D  +    L  CRLH+   L + A   +  L P 
Sbjct: 582 CMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPD 641

Query: 707 NSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            +  Y L++N+Y+S GRW     V ELM +  + K P +SL
Sbjct: 642 KACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSL 682



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/624 (23%), Positives = 284/624 (45%), Gaps = 89/624 (14%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA ++ +GL +D     +L+ LY    +   A+ +FD++ + D+YSW  ++     +D 
Sbjct: 58  IHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDS 117

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                + ++    + +  ++N++ ++                              V KA
Sbjct: 118 YSEIVQFYNTRLRKCLNEYDNVVFSI------------------------------VLKA 147

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            + L + + GR+ H  ++K+G   + +V   L+ +YAKC   + +  VF+E+ + N V +
Sbjct: 148 CSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCW 206

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           T+M+ G  + D + E L +F  M    V  +  +L S++  C + G              
Sbjct: 207 TSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGA------------- 253

Query: 250 FSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
               +H G+ VH   IK GF+ +  L   LLD+Y K GD+  A  +F  L    +VSW  
Sbjct: 254 ----LHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTA 309

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--------- 359
           MI GY Q+    +A++L    +     P+ VT+ ++L AC ++G +  GR          
Sbjct: 310 MIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG 369

Query: 360 -------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                    +F+++    V +WN+++S Y+Q+    EA++LF +
Sbjct: 370 SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQ 429

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN-YVASGLIGIYSKCQ 453
           M+   V PD  TL  +LS+CA++G    G  +H  ++K      + YV + L+  Y+KC 
Sbjct: 430 MRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCG 489

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
             E A  +F  + E + + W++MI G  +      +   F  M + ++ P +  F T+LS
Sbjct: 490 DAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILS 549

Query: 514 SCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           +C+      +G R  +   +   +V  +   + ++++  + G +  A  F + +  +  V
Sbjct: 550 ACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDV 609

Query: 573 T-WNEMIHG---YAQNGYGDEAVR 592
           +     +HG   +++   G+ AVR
Sbjct: 610 SLLGAFLHGCRLHSRFDLGEVAVR 633



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 248/521 (47%), Gaps = 97/521 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  I++ G   D+F+   L+++Y+KC                              
Sbjct: 157 GRKLHCQIVKVG-SPDSFVLTGLVDMYAKCR----------------------------- 186

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP-THITLAS 125
             ++E + ++FDE+ +RNVV W ++I   V+N   ++ L ++N+M  EG V     TL S
Sbjct: 187 --EVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRM-REGLVEGNQYTLGS 243

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A T L  +  G+  HG VIK G D N ++   LL LY KCG  + A  VF+E+S  +
Sbjct: 244 LVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTID 303

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++TAM+ G A+     EAL++F     K +  ++V+ SSVL  CA+ G          
Sbjct: 304 LVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTG---------- 353

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                S N+ G+ VHCL IKLG E D    N+L+DMYAK   +  A  +F  + ++ V++
Sbjct: 354 -----SLNM-GRSVHCLGIKLGSE-DATFENALVDMYAKCHMIGDARYVFETVFDKDVIA 406

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN +I+GY Q   + +A+EL  +M+S    PD +T +++L AC                 
Sbjct: 407 WNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAI 466

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + GD ++ R +FD M   +  +W+AM+  Y    +   ++
Sbjct: 467 KAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSL 526

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS-----G 444
           +LF +M    ++P+      ILS+C+  G+L  G +       T   + N+V S      
Sbjct: 527 ELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRY----FNTMCQVYNFVPSMKHYAC 582

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS 484
           ++ + ++  R E A     +IP + D+    + + G  L+S
Sbjct: 583 MVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHS 623


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 183/492 (37%), Positives = 278/492 (56%), Gaps = 36/492 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G++VH  T    F   + +SN LLDMYAK G +  A+++F  +  R + SWN MI GY  
Sbjct: 106 GRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYA- 164

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                             + G ++  R++FD MP     SWNA 
Sbjct: 165 ----------------------------------KLGRLEQARKLFDEMPQRDNFSWNAA 190

Query: 376 LSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           +S Y      +EA++LFR MQ       ++ TL+  L++ AA+  L  GK++H   ++T 
Sbjct: 191 ISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTE 250

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
            ++D  V S L+ +Y KC   + A  +F ++ + D+V W +MI     +    E F+ F+
Sbjct: 251 LNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFR 310

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
            + Q+ + P +++FA VL++CA  ++   G++VH  +   GY    F  SAL+ MY KCG
Sbjct: 311 DLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCG 370

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
           +   AR+ F+ MH  + V+W  +I GYAQNG  DEA+  ++ ++ SG KPD +T+V +L+
Sbjct: 371 NTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLS 430

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           AC+H+GLVD G+E F+S++  HG+    DHY C+ID L R+G F EAE +ID MP K D 
Sbjct: 431 ACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDK 490

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
            +W  LL  CR+H N+ LAKRAA+ L+ ++P+N A Y  LANIY++ G W ++  VR+ M
Sbjct: 491 FLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDM 550

Query: 735 SENCIVKDPAYS 746
               IVK P  S
Sbjct: 551 DNMGIVKKPGKS 562



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 213/429 (49%), Gaps = 25/429 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HAH   +      F+ NRL+++Y+KC +   AQ LFD+M H+D+ SWN ++    K
Sbjct: 106 GRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAK 165

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITLAS 125
              LE A KLFDEMP+R+  SWN  IS  V +    +AL ++  M  +E       TL+S
Sbjct: 166 LGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSS 225

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              AS A+  +  G+  HG +I+  L+ +  V +ALL LY KCG    A  +F++M + +
Sbjct: 226 ALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRD 285

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T M+    +  R  E   +FR +++  V  +  + + VL  CA             
Sbjct: 286 VVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACA-----------DH 334

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           +     + VHG  +H      G++      ++L+ MY+K G+   A  +F+ + +  +VS
Sbjct: 335 AAEHLGKEVHGYMMHA-----GYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVS 389

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  +I GY Q  Q  +A+   + +   G +PD+VT + +L AC  +G +  G E F S+ 
Sbjct: 390 WTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIK 449

Query: 366 SP-----SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                  +   +  ++   ++S   KEA  +   M    VKPD+   A +L  C   G L
Sbjct: 450 EKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMP---VKPDKFLWASLLGGCRIHGNL 506

Query: 421 ESGKQVHAA 429
           E  K+   A
Sbjct: 507 ELAKRAAKA 515



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 183/429 (42%), Gaps = 73/429 (17%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P+    +++  A      +E GRR H           ++++N LL +YAKCG    A  +
Sbjct: 85  PSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQML 144

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+EM   +  ++  M+ G AK  R+ +A ++F  M ++    D+ S ++ +         
Sbjct: 145 FDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQR----DNFSWNAAISGYVTHNQP 200

Query: 238 VES-DVF-------AQSDNKFSRNVH------------GQQVHCLTIKLGFEADLHLSNS 277
            E+ ++F         S NKF+ +              G+++H   I+     D  + ++
Sbjct: 201 REALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSA 260

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           LLD+Y K G +D A  IF  + +R VVSW  MI    +  +  +   L + +   G  P+
Sbjct: 261 LLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPN 320

Query: 338 EVTSINMLVACV-----------------------------------RSGDIKTGREMFD 362
           E T   +L AC                                    + G+ +  R +F+
Sbjct: 321 EYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFN 380

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            M  P + SW +++  Y+Q+    EA+  F  +   G KPD+ T   +LS+C   G+++ 
Sbjct: 381 EMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDK 440

Query: 423 G-------KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWN 474
           G       K+ H   + TA H      + +I + ++  R + AE +   +P + D   W 
Sbjct: 441 GLEYFHSIKEKHGL-MHTADHY-----ACVIDLLARSGRFKEAENIIDNMPVKPDKFLWA 494

Query: 475 SMIAGLSLN 483
           S++ G  ++
Sbjct: 495 SLLGGCRIH 503



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 158/333 (47%), Gaps = 37/333 (11%)

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           Q +  KEA++L      R   P     + ++++C     LE G++VHA +  +      +
Sbjct: 67  QQKRVKEAVELLHRTDHR---PSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVF 123

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS-LNSLDI------------ 487
           +++ L+ +Y+KC     A+ +F  +   D+  WN+MI G + L  L+             
Sbjct: 124 ISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRD 183

Query: 488 ------------------EAFMFFKQMRQNEMYPT-QFSFATVLSSCAKLSSSFQGRQVH 528
                             EA   F+ M+++E   + +F+ ++ L++ A +     G+++H
Sbjct: 184 NFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIH 243

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
             + +     D  V SAL+++Y KCG +  AR  FD M  ++ V+W  MIH   ++G  +
Sbjct: 244 GYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRRE 303

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
           E   L++D++ SGV+P++ TF  +L AC+      +G E+   M +  G +P     + +
Sbjct: 304 EGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYM-MHAGYDPGSFAISAL 362

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           +    + G+   A  + +EM  + D V W  L+
Sbjct: 363 VHMYSKCGNTRVARRVFNEMH-QPDLVSWTSLI 394



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 40/224 (17%)

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           + + +  P+   ++T++++C +  +   GR+VHA  +   +V  +F+ + L++MY KCG 
Sbjct: 78  LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGS 137

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  A+  FD M  ++  +WN MI GYA+ G  ++A +L+ +M     + D+ ++ A ++ 
Sbjct: 138 LVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEM----PQRDNFSWNAAISG 193

Query: 616 CSHSGLVDVGVEIFNSMQLD-----------------------------HG----VEPIL 642
                     +E+F  MQ                               HG     E  L
Sbjct: 194 YVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNL 253

Query: 643 DH--YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           D   ++ ++D  G+ G   EA  + D+M  + D V W  ++  C
Sbjct: 254 DEVVWSALLDLYGKCGSLDEARGIFDQMKDR-DVVSWTTMIHRC 296


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 220/719 (30%), Positives = 350/719 (48%), Gaps = 115/719 (15%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF-EEMSEPNEVTFTAMMSGLAKTDR 201
           HG ++ +GL   +++ N LL  Y  CG    A  +   +++ PN +T   M++G AK  R
Sbjct: 47  HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106

Query: 202 VVEALEMF-RLMIRKAVSIDS------------VSLSSVLGV--------------CARE 234
           + +A+E+F R+  R   S ++            VSL + L +              CA +
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 166

Query: 235 GCG-------------VESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-------EADLHL 274
            CG             +     +Q D++ +  +    V C  + L         E  +  
Sbjct: 167 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 226

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
            NS+L  Y K   +D A  +F ++PER VVSWN+M++   Q  +  +A++++  M+S G 
Sbjct: 227 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 286

Query: 335 EPDEVTSINMLVACVR-----------------------------------SGDIKTGRE 359
             D  T  + L AC R                                   SG  K  + 
Sbjct: 287 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKG 346

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F+S+   +  +W  ++S + Q     E+++LF +M+   +  D+  LA ++S C +   
Sbjct: 347 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 406

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L  G+Q+H+  LK+       V++ LI +Y+KC   + AE +F  + E DIV W SMI  
Sbjct: 407 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITA 466

Query: 480 LSLNSLDIEAFMFFKQMRQN----------------------EMY----------PTQFS 507
            S      +A  FF  M +                        MY          P   +
Sbjct: 467 YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 526

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           + T+   CA L ++  G Q+  +  K G + D  V +A+I MY KCG I  AR+ FD ++
Sbjct: 527 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 586

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            K+ V+WN MI GY+Q+G G +A+ ++ D++  G KPD I++VA+L+ CSHSGLV  G  
Sbjct: 587 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKF 646

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F+ M+  H + P L+H++CM+D LGRAGH  EA+ LID+MP K    +W  LLS+C++H
Sbjct: 647 YFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIH 706

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            N  LA+ AA+ +F LD  +S  Y L+A IY+  G+ DD   +R+LM +  I K+P YS
Sbjct: 707 GNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 765



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 171/626 (27%), Positives = 297/626 (47%), Gaps = 64/626 (10%)

Query: 21  DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEM 80
           DD+ +   L++++ +C     A  LF ++    ++  N++L+   K+  ++ A +LFD M
Sbjct: 191 DDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSM 250

Query: 81  PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           PER+VVSWN ++SAL ++G   +AL +   M ++G      T  S   A   L  +  G+
Sbjct: 251 PERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGK 310

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           + H  VI+     + YVA+AL+ LYAK G  K A  VF  + + N V +T ++SG  +  
Sbjct: 311 QLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYG 370

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
              E++E+F  M  + +++D  +L++++ G C+R    +                 G+Q+
Sbjct: 371 CFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL-----------------GRQL 413

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H L +K G    + +SNSL+ MYAK  ++ SAE IF  + E+ +VSW  MI  Y Q    
Sbjct: 414 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQ---- 469

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
                                           G++   RE FD M   +V +WNAML +Y
Sbjct: 470 -------------------------------VGNVAKAREFFDGMSEKNVITWNAMLGAY 498

Query: 380 SQSENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
            Q    ++ +++++ M     V+PD  T   +   CA +G  + G Q+   ++K    ID
Sbjct: 499 IQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIID 558

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
             VA+ +I +YSKC R   A +VF  +   DIV WN+MI G S + +  +A   F  + +
Sbjct: 559 TSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILK 618

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG----SALIEMYCKCG 554
               P   S+  VLS C+      +G+     +++    ++I  G    S ++++  + G
Sbjct: 619 RGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKR---AHNISPGLEHFSCMVDLLGRAG 675

Query: 555 DIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
            +  A+   D M  K T   W  ++     +G  +E   L    +     PD  +++ + 
Sbjct: 676 HLTEAKDLIDDMPMKPTAEVWGALLSACKIHG-NNELAELAAKHVFELDSPDSGSYMLMA 734

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVE 639
              + +G  D   +I   M+ D G++
Sbjct: 735 KIYADAGKSDDSAQIRKLMR-DKGIK 759



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 165/308 (53%), Gaps = 17/308 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH+  L++G      + N LI +Y+KC+N  SA+ +F  M  KDI SW ++++A  +
Sbjct: 410 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQ 469

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLAS 125
             ++  A + FD M E+NV++WN ++ A +++G EE  L +Y  M +E +V P  +T  +
Sbjct: 470 VGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVT 529

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +FK    L   + G +  G  +K+GL  +  VANA++++Y+KCG    A  VF+ ++  +
Sbjct: 530 LFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKD 589

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM++G ++     +A+E+F  ++++    D +S  +VL  C+  G  V+   F  
Sbjct: 590 IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGL-VQEGKFYF 648

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
              K + N          I  G E   H S  ++D+  + G +  A+ +  ++P +    
Sbjct: 649 DMMKRAHN----------ISPGLE---HFS-CMVDLLGRAGHLTEAKDLIDDMPMKPTAE 694

Query: 306 -WNVMIAG 312
            W  +++ 
Sbjct: 695 VWGALLSA 702



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 61/113 (53%), Gaps = 4/113 (3%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A+  G  +    ++ GL  DT + N +I +YSKC     A+ +FD +  KDI SWNA+++
Sbjct: 539 ANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMIT 598

Query: 63  AQCKSDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKM 111
              +    + A ++FD++ +R    + +S+  ++S    +GL ++    ++ M
Sbjct: 599 GYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMM 651



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 13/203 (6%)

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
           + M  TQ +FA  L SC    +    R +H ++   G  + +F+ + L+  Y  CG +  
Sbjct: 19  SHMAVTQ-AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSD 77

Query: 559 ARQFF--DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
           AR+    D+ H  N +T N M++GYA+ G   +AV L+  M A  V     ++  +++  
Sbjct: 78  ARRLLLMDIAH-PNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVA----SWNTLMSGY 132

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM----LIDEMPCKD 672
             S    V +E F SM       P      C +   G  G +H   +    ++ +   +D
Sbjct: 133 FQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALG-WHSLALQLLAMVQKFDSQD 191

Query: 673 DPVIWEVLLSSCRLHANVRLAKR 695
           D  +   L+        V LA R
Sbjct: 192 DSEVAAALVDMFVRCGAVDLASR 214


>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial [Vitis vinifera]
          Length = 694

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 212/675 (31%), Positives = 338/675 (50%), Gaps = 85/675 (12%)

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           +TL S  K+ ++LL +  G++ H LV K GL  NI+V N+L+S Y KC    +A  +F+ 
Sbjct: 53  LTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDT 112

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVE 239
            S  + V+   M++G  K+  +  A  +F  M I+  VS  ++ +      C  E  GV 
Sbjct: 113 CSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVF 172

Query: 240 SDV-----------FAQSDNKFSRNVHG----QQVHCLTIKLGFEADLHLSNSLLDMYAK 284
            D+            A   + +S +V G    + +H L+ KLG EA   ++ +L+ MY  
Sbjct: 173 KDMRFAGVIPNEVTLASVISAYS-HVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCV 231

Query: 285 NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
              + +A V+F  +PER+VV+WNVM+ GY                               
Sbjct: 232 CSSLGNARVLFDEIPERNVVTWNVMLNGYS------------------------------ 261

Query: 345 LVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
                +SG +   R++F+ +P+  V SW  ++  Y Q E   EA++++R M   GV P+ 
Sbjct: 262 -----KSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNE 316

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ----------- 453
             +  ++S+C     +  G+Q H   ++T     +++ + +I  Y+ C            
Sbjct: 317 VMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFEL 376

Query: 454 -----------------RN---ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
                            RN   E A ++F  +PE D+  W+SMI+G S N     A   F
Sbjct: 377 GSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLF 436

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
            +M    + P + +  +V S+ A L +  +GR  H  I  +    +  + +ALI+MY KC
Sbjct: 437 HEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKC 496

Query: 554 GDIYGARQ-FFDMMHGKNTVT-WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           G I  A Q F+++    ++V+ WN +I G A +G+ + +++L+  +    +KP+ ITF+ 
Sbjct: 497 GSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIG 556

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +L+AC H+GLVD G + F  M+  + +EP + HY CMID LGRAG   EA  +I +MP K
Sbjct: 557 VLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMK 616

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
            D VIW  LL++CR H NV + +RAAE L +LD  + A   LL+NIY+  GRWDD   VR
Sbjct: 617 ADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVR 676

Query: 732 ELMSENCIVKDPAYS 746
             M    + K P  S
Sbjct: 677 RAMQSQRMKKSPGCS 691



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 143/574 (24%), Positives = 260/574 (45%), Gaps = 119/574 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+ + ++GL  + F+ N LI  Y KC    +A+ LFD     D  S N +L+   K
Sbjct: 71  GQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVK 130

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S  L+ A  LF++MP +  VS+  ++  L +N    +A+ V+  M   G +P  +TLASV
Sbjct: 131 SGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASV 190

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + +  + + R  H L  K+GL+    VA  L+ +Y  C    +A  +F+E+ E N 
Sbjct: 191 ISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNV 250

Query: 187 VTFTAMMSGLAKT-------------------------------DRVVEALEMFRLMIRK 215
           VT+  M++G +K+                               +R+ EAL M+R M+R 
Sbjct: 251 VTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRT 310

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE------ 269
            V  + V +  ++  C R          A S+        GQQ H + ++ GF+      
Sbjct: 311 GVGPNEVMIVDLISACGR--------TMAVSE--------GQQFHGIIVRTGFDCYDFIQ 354

Query: 270 ----------ADLHLS---------------NSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      +++L+               N+L+  + +NG ++ A  +F  +PER V 
Sbjct: 355 ATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVF 414

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----- 359
           SW+ MI+GY Q  Q   A++L   M + G +P+E+T +++  A    G +  GR      
Sbjct: 415 SWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYI 474

Query: 360 MFDSMP--------------------------------SPSVSSWNAMLSSYSQSENHKE 387
           + +S+P                                  SVS WNA++   +   +   
Sbjct: 475 LSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANV 534

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGL 445
           ++KLF ++Q   +KP+  T   +LS+C   G++++G++ +   +K   +I+  +     +
Sbjct: 535 SLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEK-YFKGMKNLYNIEPNIKHYGCM 593

Query: 446 IGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
           I +  +  R + A  +  ++P + D+V W +++A
Sbjct: 594 IDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLA 627



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 219/465 (47%), Gaps = 61/465 (13%)

Query: 3   AHVAG----KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           +HV G    ++LHA   + GL     +   L+ +Y  C++  +A+ LFD++P +++ +WN
Sbjct: 195 SHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWN 254

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
            +L+   KS  ++ A  LF+ +P ++VVSW  +I   V+     +AL +Y  M   G  P
Sbjct: 255 VMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGP 314

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG--------- 169
             + +  +  A    + V  G++ HG++++ G D   ++   ++  YA CG         
Sbjct: 315 NEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQF 374

Query: 170 ----------WT------------KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
                     W             + A  +F+EM E +  ++++M+SG ++ ++   AL+
Sbjct: 375 ELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQ 434

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +F  M+   V  + +++ SV    A  G  +E                G+  H   +   
Sbjct: 435 LFHEMVAGGVQPNEITMVSVFSAIATLGTLME----------------GRWAHEYILSNS 478

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER--SVVSWNVMIAGYGQKYQSTKAIEL 325
              + +L+ +L+DMYAK G +  A  +F  + +R  SV  WN +I G      +  +++L
Sbjct: 479 IPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKL 538

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYS 380
             +++    +P+ +T I +L AC  +G + TG + F  M +     P++  +  M+    
Sbjct: 539 FSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLG 598

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           ++   KEA ++ R+M    +K D      +L++C   G +E G++
Sbjct: 599 RAGRLKEAAEMIRKMP---MKADVVIWGTLLAACRTHGNVEIGER 640



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 49/281 (17%)

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
           FF   +  +    + +  + L SC+ L +  QG+Q+H+ + K G +++IFV ++LI  Y 
Sbjct: 39  FFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYV 98

Query: 552 KC-------------------------------GDIYGARQFFDMMHGKNTVTWNEMIHG 580
           KC                               G +  AR  F+ M  K  V++  M+ G
Sbjct: 99  KCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMG 158

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
            AQN    EA+ ++KDM  +GV P+++T  ++++A SH G + +   + +++    G+E 
Sbjct: 159 LAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGI-LNCRMLHALSFKLGLEA 217

Query: 641 I------LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           +      L H  C+   LG       A +L DE+P + + V W V+L+       V LA+
Sbjct: 218 LNIVATNLVHMYCVCSSLG------NARVLFDEIP-ERNVVTWNVMLNGYSKSGLVDLAR 270

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDD-LRAVRELM 734
              E   R+  K+   +  + + Y  + R  + LR  R ++
Sbjct: 271 DLFE---RIPAKDVVSWGTIIDGYVQIERLGEALRMYRSML 308


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 203/630 (32%), Positives = 320/630 (50%), Gaps = 88/630 (13%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           +N +  N+LLSLYAK G    A  VF EM + + V++T M+ GL ++ R  +A++ F  M
Sbjct: 279 RNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDM 338

Query: 213 IRKAVSIDSVSLSSVLGVCAR-EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           + +  +    +L++VL  CA  E CGV                 G++VH   +KLG  + 
Sbjct: 339 VSEGFAPSQFTLTNVLSSCAAMEACGV-----------------GRKVHPFVVKLGLSSC 381

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + ++NS+L MY K GD ++A  +F  +  RSV SWNVM++ Y  +               
Sbjct: 382 VPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQ--------------- 426

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                               G ++    MF++M   S+ SWN +++ Y+Q+     A+K 
Sbjct: 427 --------------------GRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKF 466

Query: 392 F-REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           F R +    ++PD  T+  +LS+CA + +L+ GKQ+H+  L+T     + + + LI  Y+
Sbjct: 467 FSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYA 526

Query: 451 KCQRNELAERV---------------------------------FHRIPELDIVCWNSMI 477
           K    E A R+                                 F  +   D++ W +MI
Sbjct: 527 KSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMI 586

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            G   N  + EA   F+ M      P   + A VLS+CA L+    G+Q+H +  +    
Sbjct: 587 VGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQE 646

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
             + V +A+I +Y + G +  AR+ FD +   K T+TW  MI   AQ+G G++AV L+++
Sbjct: 647 QSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEE 706

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M+  GVKPD IT+V +L+AC+H+G VD G   +  MQ +HG+ P + HY CM+D   RAG
Sbjct: 707 MVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAG 766

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              EA   I  MP   D V+W  LL++CR+  N  LA+ AA +L  +DP NS  YS LAN
Sbjct: 767 LLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALAN 826

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +YS+ GRW+D   + +L  +  + K+  +S
Sbjct: 827 VYSACGRWNDAARIWKLRKDKGVKKETGFS 856



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 158/613 (25%), Positives = 266/613 (43%), Gaps = 107/613 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHS----AQHLFDKMPH--KDIYSWNA 59
           AG+ +HAH ++ GL   T+LCN L+  Y+    +      A+ LFD +P+  ++ ++WN+
Sbjct: 227 AGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWNS 286

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           +LS   KS  L  A+ +F EMP+R+ VSW  +I  L R+G    A+  +  M +EGF P+
Sbjct: 287 LLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPS 346

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             TL +V  +  A+     GR+ H  V+K+GL   + VAN++L +Y KCG  + A  VFE
Sbjct: 347 QFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFE 406

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG---- 235
            M   +  ++  M+S      R+  A+ MF  M+ +++    VS ++++    + G    
Sbjct: 407 RMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI----VSWNTIIAGYNQNGLDGM 462

Query: 236 -----------CGVESDVFAQSD-----NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
                        +E D F  +              G+Q+H   ++ G      + N+L+
Sbjct: 463 ALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALI 522

Query: 280 DMYAKN---------------------------------GDMDSAEVIFSNLPERSVVSW 306
             YAK+                                 GD   A  IF  +  R V++W
Sbjct: 523 STYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAW 582

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
             MI GY Q  Q+ +A+EL + M   G EP+  T   +L AC                  
Sbjct: 583 TAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIR 642

Query: 349 -----------------VRSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSENHKEAIK 390
                             RSG +   R +FD +       +W +M+ + +Q    ++A+ 
Sbjct: 643 SLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVV 702

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK---TASHIDNYVASGLIG 447
           LF EM   GVKPD  T   +LS+CA  G ++ GK+ +            + +Y    ++ 
Sbjct: 703 LFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYAC--MVD 760

Query: 448 IYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSL-NSLDIEAFMFFKQMRQNEMYPTQ 505
           ++++      A     R+P   D V W S++A   +  + D+      K +  +      
Sbjct: 761 LHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGA 820

Query: 506 FS-FATVLSSCAK 517
           +S  A V S+C +
Sbjct: 821 YSALANVYSACGR 833



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 146/314 (46%), Gaps = 12/314 (3%)

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           +  + L+ +Y+K  R   A  VF  +P+ D V W  MI GL+ +    +A   F  M   
Sbjct: 282 FTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSE 341

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
              P+QF+   VLSSCA + +   GR+VH  + K G  + + V ++++ MY KCGD   A
Sbjct: 342 GFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETA 401

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           R  F+ M  ++  +WN M+  Y   G  + AV ++++M+   +    +++  I+   + +
Sbjct: 402 RAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI----VSWNTIIAGYNQN 457

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG-----RAGHFHEAEMLIDEMPCKDDP 674
           GL  + ++ F+ M     +EP     T ++         + G    + +L   MPC    
Sbjct: 458 GLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQ- 516

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
            I   L+S+     +V  A+R  ++    D  N   ++ L   Y  LG     R + ++M
Sbjct: 517 -IMNALISTYAKSGSVETARRIMDQAVVAD-LNVISFTALLEGYVKLGDTKQAREIFDIM 574

Query: 735 SENCIVKDPAYSLG 748
           +   ++   A  +G
Sbjct: 575 NNRDVIAWTAMIVG 588



 Score = 46.2 bits (108), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 43/255 (16%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG----ARQFF 563
           +A +L  C    +   GR +HA   K G +   ++ + L+  Y   G   G    AR  F
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271

Query: 564 DMMH--GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
           D +    +N  TWN ++  YA++G   +A  ++ +M       D +++  ++   + SG 
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEM----PDRDAVSWTIMIVGLNRSGR 327

Query: 622 VDVGVEIFNSMQLDHGVEP-------ILDHYTCMIDC-LGRAGHFHEAEMLIDEMPCKDD 673
               V+ F  M +  G  P       +L     M  C +GR  H                
Sbjct: 328 FWDAVKTFLDM-VSEGFAPSQFTLTNVLSSCAAMEACGVGRKVH---------------- 370

Query: 674 PVIWEVLLSSCRLHANVRL--------AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
           P + ++ LSSC   AN  L        A+ A     R+  ++ + ++++ ++Y+  GR +
Sbjct: 371 PFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRME 430

Query: 726 DLRAVRELMSENCIV 740
              ++ E M E  IV
Sbjct: 431 LAVSMFENMVERSIV 445


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 207/665 (31%), Positives = 327/665 (49%), Gaps = 61/665 (9%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM- 181
           L S+ +  T    +  GR+ H  ++  G+  N  +   LL +Y  CG    A  +F ++ 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 182 ---SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
              SEP    +  M+ G     +   AL  +  M+      D  +   V+  C     G+
Sbjct: 109 LWCSEP----WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACG----GL 160

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
            S               G+ VH     +GFE D+ + +SL+  Y++NG +  A  +F  +
Sbjct: 161 NSVAL------------GRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------- 348
           P +  V WNVM+ GY +      A  +   M+     P+ VT   +L  C          
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268

Query: 349 ------VRSG---------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                 V SG                     D++  R++FD      +    AM+S Y  
Sbjct: 269 QLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVL 328

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +  +  A+++FR +    ++ +  TLA +L +CA +  L  GK++H   LK       YV
Sbjct: 329 NGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYV 388

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            S ++ +Y+KC R +LA + F  I + D VCWNSMI   S N    EA   F+QM     
Sbjct: 389 GSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGT 448

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
                S +  LS+CA L +   G+++HA + +  + +D+F  SALI+MY KCG++  A +
Sbjct: 449 KYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACR 508

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            FD M  KN V+WN +I  Y  +G   +++ L+  M+  G++PD +TF+AI++AC H+G 
Sbjct: 509 VFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQ 568

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           VD G+  F  M  + G+   ++HY CM+D  GRAG  +EA  +I+ MP   D  +W  LL
Sbjct: 569 VDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLL 628

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
            +CRLH NV LA+ A+  LF LDP+NS  Y LL+N++++ G+W+ +  +R LM E  + K
Sbjct: 629 GACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQK 688

Query: 742 DPAYS 746
            P  S
Sbjct: 689 VPGCS 693



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 234/547 (42%), Gaps = 84/547 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  HA +L NG+  +  L  +L+ +Y  C     A+++F                    
Sbjct: 65  GRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIF-------------------- 104

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                +  +L+   P      WN +I      G  + AL  Y KM   G +P   T   V
Sbjct: 105 -----YQLRLWCSEP------WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYV 153

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L  V  GR  H  +  +G + +++V ++L+  Y++ G    A  +F+ M   + 
Sbjct: 154 IKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDG 213

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +  M++G  K      A  +F  M R   + +SV+ + VL VCA       S++    
Sbjct: 214 VLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA-------SEIMIN- 265

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNS--LLDMYAKNGDMDSAEVIFSNLPERSVV 304
                    G Q+H L +  G E D  ++N+  L+D+Y K  D++ A  IF       +V
Sbjct: 266 --------FGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIV 317

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
               MI+GY     +  A+E+ + +       + VT  ++L AC     +  G+E+    
Sbjct: 318 VCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHI 377

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          F  +       WN+M++S SQ+   +EAI
Sbjct: 378 LKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAI 437

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LFR+M   G K D  +++  LS+CA +  L  GK++HA  ++ A   D +  S LI +Y
Sbjct: 438 DLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMY 497

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           SKC   +LA RVF  + E + V WNS+IA    +    ++   F  M  + + P   +F 
Sbjct: 498 SKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFL 557

Query: 510 TVLSSCA 516
            ++S+C 
Sbjct: 558 AIISACG 564



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 175/368 (47%), Gaps = 24/368 (6%)

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
           A++    K  D+E A K+FD+    ++V    +IS  V NG+   AL ++  +  E    
Sbjct: 290 ALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRA 349

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
             +TLASV  A   L  +  G+  HG ++K G   + YV +A++ +YAKCG    A   F
Sbjct: 350 NSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTF 409

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
             +S+ + V + +M++  ++  +  EA+++FR M       D VS+S+ L  CA      
Sbjct: 410 IGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACA------ 463

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                           +G+++H   ++  F +DL   ++L+DMY+K G++D A  +F  +
Sbjct: 464 ----------NLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTM 513

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
            E++ VSWN +IA YG   +   ++ L   M   G +PD VT + ++ AC  +G +  G 
Sbjct: 514 EEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGI 573

Query: 359 EMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
             F  M         +  +  M+  + ++    EA  +   M F    PD      +L +
Sbjct: 574 HYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPF---SPDAGVWGTLLGA 630

Query: 414 CAAMGILE 421
           C   G +E
Sbjct: 631 CRLHGNVE 638



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 230/519 (44%), Gaps = 90/519 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H  I   G   D F+ + LI+ YS+    H A++LFD+                  
Sbjct: 166 GRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDR------------------ 207

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        MP ++ V WN +++  V+NG  + A  V+ +M      P  +T A V
Sbjct: 208 -------------MPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACV 254

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVAN--ALLSLYAKCGWTKHAVPVFEEMSEP 184
                + + +  G + HGLV+  GL+ +  VAN  AL+ +Y KC   + A  +F++ +  
Sbjct: 255 LSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPV 314

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V  TAM+SG         ALE+FR ++++ +  +SV+L+SVL  CA    G+ +    
Sbjct: 315 DIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACA----GLAALTL- 369

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+++H   +K G     ++ ++++DMYAK G +D A   F  + ++  V
Sbjct: 370 -----------GKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAV 418

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
            WN MI    Q  +  +AI+L ++M   G + D V+    L AC     +  G+E+    
Sbjct: 419 CWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFM 478

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          FD+M   +  SWN+++++Y      K+++
Sbjct: 479 MRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSL 538

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAASLKTASHIDNYVASGLI 446
            LF  M   G++PD  T   I+S+C   G ++ G    +     L   + +++Y    ++
Sbjct: 539 NLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYAC--MV 596

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS 484
            ++ +  R   A  + + +P   D   W +++    L+ 
Sbjct: 597 DLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHG 635



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 81/400 (20%), Positives = 165/400 (41%), Gaps = 87/400 (21%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH HIL+NG     ++ + ++++Y+KC     A   F  +  KD   WN+       
Sbjct: 370 GKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNS------- 422

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I++  +NG  E+A+ ++ +M   G     +++++ 
Sbjct: 423 ------------------------MITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAA 458

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L  + +G+  H  +++     +++  +AL+ +Y+KCG    A  VF+ M E NE
Sbjct: 459 LSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNE 518

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ ++++      R+ ++L +F  M+   +  D V+  +++  C   G           
Sbjct: 519 VSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAG----------- 567

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             +    +H     C+T +LG  A +     ++D++ + G ++ A  + +++P       
Sbjct: 568 --QVDEGIH--YFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMP------- 616

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK----TGREMFD 362
                                      F PD      +L AC   G+++      R +FD
Sbjct: 617 ---------------------------FSPDAGVWGTLLGACRLHGNVELAEVASRNLFD 649

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE-MQFRGVK 401
               P  S +  +LS+   +    E++   R  M+ RGV+
Sbjct: 650 L--DPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQ 687


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 196/649 (30%), Positives = 339/649 (52%), Gaps = 57/649 (8%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           V   ++ H L++  G  ++I+++  L++ YA  G   HA   F+++   +  T+ +M+S 
Sbjct: 56  VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115

Query: 196 LAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
            A+      A++ F   +  + +  D  +   V+       CG   D             
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVI-----RACGNLDD------------- 157

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G++VHCL +KLGFE D++++ S +  Y++ G +  A  +F N+  R + +WN MI+G+ 
Sbjct: 158 -GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFY 216

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------------------- 349
              +  +A+E+   M+      D VT  ++L  CV                         
Sbjct: 217 LNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLF 276

Query: 350 ----------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                     + G++++   +F+ M    + SWN++L+++ Q++    A+ ++ +M   G
Sbjct: 277 VCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIG 336

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI-DNYVASGLIGIYSKCQRNELA 458
           V PD  TL  + S  A +G   S + +H    +    + D  + + +I +Y+K    + A
Sbjct: 337 VVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSA 396

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQFSFATVLSSCAK 517
            +VF  +P  D++ WNS+I G S N L  EA   +  MR  +   P Q ++ ++L++ ++
Sbjct: 397 RKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQ 456

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           L +  QG + H Q+ K+    DIFV + L++MY KCG +  A   F  +  +++V+WN +
Sbjct: 457 LGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAI 516

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I  +  +GYG +AV+L+K+M + GVKPD ITFV++L+ACSHSGLVD G   F  MQ  +G
Sbjct: 517 ISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYG 576

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           + P L HY CM+D  GRAGH  +A   +  MP + D  +W  LL +CR+H NV L +  +
Sbjct: 577 IRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVS 636

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + L +++ +N   Y LL+NIY+ LG W+ +  VR L  +  + K P +S
Sbjct: 637 DHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWS 685



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 175/653 (26%), Positives = 308/653 (47%), Gaps = 122/653 (18%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K H+A K LHA ++ +G     FL  +LI  Y+              +PH          
Sbjct: 55  KVHLA-KQLHALLVVSGKTQSIFLSAKLINRYA----------FLGDIPH---------- 93

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT-H 120
                      A   FD++  ++V +WN++ISA  R G    A+  +N+  +  F+ + H
Sbjct: 94  -----------ARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDH 142

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T   V +A   L D   GR+ H LV+K+G + ++Y+A + +  Y++ G+   A  +F+ 
Sbjct: 143 YTFPPVIRACGNLDD---GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDN 199

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M   +  T+ AM+SG     +V EALE+F  M  K+VS+DSV++SS+L +C         
Sbjct: 200 MMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPIC--------- 250

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
               Q D+  S    G  +H   IKLG E DL + N+L++MYAK G++ SAE IF+ +  
Sbjct: 251 ---VQLDDIIS----GVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKV 303

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD------- 353
           R +VSWN ++A + Q  +   A+ +  +M S G  PD +T +++       G+       
Sbjct: 304 RDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSI 363

Query: 354 -----------------------------IKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                        I + R++F+ +P   V SWN++++ YSQ+  
Sbjct: 364 HGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGL 423

Query: 385 HKEAIKLFREMQ-FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
             EAI ++  M+ + G  P++ T   IL++ + +G L+ G + H   +K   + D +V++
Sbjct: 424 ANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVST 483

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            L+ +Y KC +   A  +F+ +P    V WN++I+   L+   ++A   FK+M+   + P
Sbjct: 484 CLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKP 543

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              +F ++LS+C+      +G+     ++                      + YG R   
Sbjct: 544 DHITFVSLLSACSHSGLVDEGQWCFQLMQ----------------------ETYGIRP-- 579

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
            + H      +  M+  + + G+ ++A    K+M    V+PD   + A+L AC
Sbjct: 580 SLKH------YGCMVDLFGRAGHLEKAFNFVKNM---PVRPDVSVWGALLGAC 623



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 218/464 (46%), Gaps = 58/464 (12%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           ++G L+H + ++ GL  D F+CN LI +Y+K     SA+ +F++M  +DI SWN++L+A 
Sbjct: 257 ISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAF 316

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                         E  ++ V+                 AL VYNKM + G VP  +TL 
Sbjct: 317 --------------EQNKKPVI-----------------ALGVYNKMHSIGVVPDLLTLV 345

Query: 125 SVFKASTALLDVEHGRRCHGLVI-KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           S+   +  L +    R  HG V  +     +I + NA++ +YAK G+   A  VFE +  
Sbjct: 346 SLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPV 405

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + +++ ++++G ++     EA++++             S+    G    +G  V     
Sbjct: 406 KDVISWNSLITGYSQNGLANEAIDVYS------------SMRYYSGAVPNQGTWVS---I 450

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
             + ++      G + H   IK     D+ +S  L+DMY K G +  A  +F  +P +S 
Sbjct: 451 LTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSS 510

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           VSWN +I+ +G      KA++L + M+S G +PD +T +++L AC  SG +  G+  F  
Sbjct: 511 VSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQL 570

Query: 364 MPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           M       PS+  +  M+  + ++ + ++A    + M    V+PD +    +L +C    
Sbjct: 571 MQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMP---VRPDVSVWGALLGACRIHE 627

Query: 419 ILESGKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNELAERV 461
            +E  + V    LK  S ++  YV   L  IY+K    E  + V
Sbjct: 628 NVELVRTVSDHLLKVESENVGYYVL--LSNIYAKLGHWEGVDEV 669


>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
 gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
          Length = 828

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 219/776 (28%), Positives = 390/776 (50%), Gaps = 87/776 (11%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LHAH++   L ++     +L+E YS+  +  S++ +F   P  D + ++ ++        
Sbjct: 20  LHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHL---- 75

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH---ITLASV 126
                             WN+L           + LS++N     G   T        SV
Sbjct: 76  ------------------WNHLF---------REVLSLFNHHIQMGSKLTQNCAFLYPSV 108

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A T + ++  GR+ HG ++K G  ++  +  +L+ +Y +  + + A  VF+EM   + 
Sbjct: 109 IRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDL 168

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +++++S   +     E LEMFR MI + +  DSV L SV   C + GC          
Sbjct: 169 VLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGC---------- 218

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             + +++VHG       ++ G   D  LSNSL+ MY++ G +  A+ +F  + +RS   W
Sbjct: 219 -LRLAKSVHG-----YVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCW 272

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
             MI+ Y Q     +A+++  +M+    EP++VT I++L +C R G +K G+        
Sbjct: 273 TSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLR 332

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                       ++  S+ + ++ SWN ++S Y++   + EA+ 
Sbjct: 333 NAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMA 392

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            F  M  +G+ PD  +LA  +S+ A+ G ++ G+Q+H   +K     D +V + L+ +YS
Sbjct: 393 FFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRG-FFDEFVQNSLMDMYS 451

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC     A  +F++I    IV WN MI G S N + +EA   F +M +N +   + +F +
Sbjct: 452 KCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLS 511

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
            + +C+ L    +G+ +H +I   G  ND+++ +AL++MY KCGD+  A++ FD +  K+
Sbjct: 512 AIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKS 571

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+W+ MI  +  +G  + A  L+  M+ S +KP+++TF+ IL+AC H+G V  G   FN
Sbjct: 572 VVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFN 631

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           +M+  +G+ P ++H+  ++D L RAG  + A  +I  +       IW  LL+ CR++  +
Sbjct: 632 TMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRM 691

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + +  AEEL  +   ++  Y+LL+NIY+  G W + R VR  M    + K P YS
Sbjct: 692 DMIEYIAEELGGISTDDTGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYS 747



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 151/648 (23%), Positives = 296/648 (45%), Gaps = 88/648 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G+ LH  IL++G  +D  +   L+ +Y +      A+ +FD+M  +D+  W++I    
Sbjct: 119 IVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSI---- 174

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                      IS  V NG+  + L ++  M  EG  P  + L 
Sbjct: 175 ---------------------------ISCYVENGVYREGLEMFRSMICEGIRPDSVMLL 207

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV +A   +  +   +  HG V++ G+  +  ++N+L+ +Y++CG+   A  +FE + + 
Sbjct: 208 SVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDR 267

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +   +T+M+S   + +   EAL++F  M    V  + V++ SVL  CAR G         
Sbjct: 268 STSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLG--------- 318

Query: 245 QSDNKFSRNVHGQQVHCLTIK--LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                  R   G+ VHC  ++  +G    L L  +L+D Y+    M S E +  ++   +
Sbjct: 319 -------RLKEGKSVHCFVLRNAMGVTG-LDLGPALIDFYSACWKMSSCEKLLHSIGNEN 370

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--- 359
           +VSWN +I+ Y ++  + +A+     M + G  PD  +  + + A   SG I+ G++   
Sbjct: 371 IVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHG 430

Query: 360 -------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                          +F+ +   S+ +WN M+  +SQ+    EA
Sbjct: 431 HVMKRGFFDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEA 490

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           + LF EM    ++ ++ T    + +C+ +G L+ GK +H   + T +  D Y+ + L+ +
Sbjct: 491 LSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDM 550

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+KC   + A++VF  I E  +V W++MIA   ++     A   F +M  + + P + +F
Sbjct: 551 YAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTF 610

Query: 509 ATVLSSCAKLSSSFQGR-QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
             +LS+C    S  +G+   +   +  G V ++   ++++++  + GDI GA +    + 
Sbjct: 611 MNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIR 670

Query: 568 GKNTVT-WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
                + W  +++G    G  D    + +++   G+  DD  +  +L+
Sbjct: 671 TPVAASIWGALLNGCRIYGRMDMIEYIAEEL--GGISTDDTGYYTLLS 716



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 3/199 (1%)

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           Q+HA  + T+ H +   ++ L+  YS+    + +  VF+  P  D   ++ +I     N 
Sbjct: 19  QLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNH 78

Query: 485 LDIEAFMFFKQMRQNEMYPTQ---FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
           L  E    F    Q     TQ   F + +V+ +   +     GR++H +I K G+  D  
Sbjct: 79  LFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRV 138

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           +G++L+ MY +   +  A++ FD M  ++ V W+ +I  Y +NG   E + +++ MI  G
Sbjct: 139 IGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEG 198

Query: 602 VKPDDITFVAILTACSHSG 620
           ++PD +  +++  AC   G
Sbjct: 199 IRPDSVMLLSVAEACGKIG 217


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 205/617 (33%), Positives = 315/617 (51%), Gaps = 65/617 (10%)

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
           YV N LL+ YA+ G    A  +F+ M +PN  T  A++S LA    + +   +F  M ++
Sbjct: 46  YVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQR 105

Query: 216 AVSIDSVSLSSVLG----------------VCAREGCGVESDVFAQSDNKFSRNVH---- 255
               D+VS ++++                    RE   V+      S    S  V     
Sbjct: 106 ----DAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASA 161

Query: 256 ------GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+QVHC  ++LGF A     + L+DMYAK G +  A+ +F  +  ++VV +N M
Sbjct: 162 LGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTM 221

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSV 369
           I G                                    +R   ++  R +F++M     
Sbjct: 222 ITGL-----------------------------------LRCKMVEEARGVFEAMVDRDS 246

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
            +W  M++  +Q+    EA+ +FR M+  GV  D+ T   IL++C A+   E GKQ+HA 
Sbjct: 247 ITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAY 306

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
           +++T    + +V S L+ +YSKC+   LAE VF R+   +I+ W +MI G   N    EA
Sbjct: 307 TIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEA 366

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
              F +M+ + + P  F+  +V+SSCA L+S  +G Q H      G    I V SAL+ +
Sbjct: 367 VRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTL 426

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y KCG I  A + FD M   + V++  ++ GYAQ G   E + L++ M+  GVKP+ +TF
Sbjct: 427 YGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTF 486

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           + +L+ACS SGLV+ G   F+SMQ DHG+  + DHYTCMID   R+G   EAE  I +MP
Sbjct: 487 IGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMP 546

Query: 670 CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRA 729
              D + W  LLS+CRL  ++ + K AAE L + DP+N A Y LL ++++S G W ++  
Sbjct: 547 RCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVAL 606

Query: 730 VRELMSENCIVKDPAYS 746
           +R  M +  + K+P  S
Sbjct: 607 LRRGMRDRQVKKEPGCS 623



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 216/432 (50%), Gaps = 24/432 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  I+R G     F  + L+++Y+K      A+ +FD+M  K++  +N +++   +
Sbjct: 168 GRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLR 227

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A  +F+ M +R+ ++W  +++ L +NGL+ +AL V+ +M  EG      T  S+
Sbjct: 228 CKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSI 287

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  AL   E G++ H   I+   D NI+V +AL+ +Y+KC   + A  VF  M+  N 
Sbjct: 288 LTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNI 347

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TAM+ G  +     EA+ +F  M    +  +  +L SV+  CA              
Sbjct: 348 ISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCA-------------- 393

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G Q HC+ +  G    + +S++L+ +Y K G ++ A  +F  +P    VS+
Sbjct: 394 --NLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSY 451

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             +++GY Q  ++ + I+L ++M   G +P+ VT I +L AC RSG ++ G   F SM  
Sbjct: 452 TALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQ 511

Query: 367 PSV-----SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                     +  M+  YS+S   KEA +  R+M      PD    A +LS+C   G +E
Sbjct: 512 DHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMP---RCPDAIGWATLLSACRLRGDME 568

Query: 422 SGKQVHAASLKT 433
            GK      LKT
Sbjct: 569 IGKWAAENLLKT 580



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/633 (24%), Positives = 280/633 (44%), Gaps = 113/633 (17%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
           T++ N L+  Y++      A+ LFD MP  ++++ NA+LSA   +  L    +LF  MP+
Sbjct: 45  TYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQ 104

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-------PTHITLASVFKASTALLD 135
           R+ VS+N LI+     G   +A   Y  +  E  V       P+ IT++ +  A++AL D
Sbjct: 105 RDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGD 164

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAK---------------------------- 167
              GR+ H  ++++G     +  + L+ +YAK                            
Sbjct: 165 RALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITG 224

Query: 168 ---CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSL 224
              C   + A  VFE M + + +T+T M++GL +     EAL++FR M  + V ID  + 
Sbjct: 225 LLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTF 284

Query: 225 SSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK 284
            S+L  C            A S+        G+Q+H  TI+  ++ ++ + ++L+DMY+K
Sbjct: 285 GSILTACG---------ALAASEE-------GKQIHAYTIRTLYDGNIFVGSALVDMYSK 328

Query: 285 NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
              +  AE +F  +  ++++SW  MI GYGQ     +A+ +   M++ G +P++ T  ++
Sbjct: 329 CRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSV 388

Query: 345 LVACV-----------------------------------RSGDIKTGREMFDSMPSPSV 369
           + +C                                    + G I+    +FD MP    
Sbjct: 389 ISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQ 448

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG------ 423
            S+ A++S Y+Q    KE I LF +M  +GVKP+  T   +LS+C+  G++E G      
Sbjct: 449 VSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHS 508

Query: 424 -KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLS 481
            +Q H   L      D+Y    +I +YS+  R + AE    ++P   D + W ++++   
Sbjct: 509 MQQDHGIVLLD----DHYTC--MIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACR 562

Query: 482 LNS-LDIEAFMFFKQMRQNEMYPTQFSFATVL-------SSCAKLSSSFQGRQVHAQ--I 531
           L   ++I  +     ++ +   P  +     +       S  A L    + RQV  +   
Sbjct: 563 LRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGC 622

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
               Y N + + SA  + +   G IY   Q+ +
Sbjct: 623 SWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLN 655


>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 215/713 (30%), Positives = 362/713 (50%), Gaps = 67/713 (9%)

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT--HITLASVFKAST 131
           ++  D+ P+  + S N  +   +R  L  +AL ++ K    GFV     +T+A V KA  
Sbjct: 32  HQPLDQSPQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACC 91

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
              D + G + H   I  G   ++ V N+L+++Y K G    A+ VFE ++ P+ V++  
Sbjct: 92  G--DSKLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNT 149

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           ++SG  ++D   +AL     M    V+ D+V+ ++VL  C+      E  +F        
Sbjct: 150 VLSGFQRSD---DALNFALRMNFTGVAFDAVTCTTVLAFCSDH----EGFIF-------- 194

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G Q+H   +K G + ++ + N+L+ MY++   +  A  +F  +  + +VSWN M++
Sbjct: 195 ----GFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLS 250

Query: 312 GYGQKYQS-TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------- 360
           GY Q+  S  +AI +   M   G + D V+    + AC    + + GR++          
Sbjct: 251 GYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYD 310

Query: 361 -------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                                    F+S+   +V SW  M+S      + ++A  LF EM
Sbjct: 311 THVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISI-----SEEDATSLFNEM 365

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
           +  GV P+  T   ++ +     ++E G+ +H   +KT+   +  V++ LI +Y+K +  
Sbjct: 366 RRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESM 425

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
             + +VF  +   +I+ WNS+I+G + N L  EA   F      E  P +F+F +VLSS 
Sbjct: 426 SDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALM-ESRPNEFTFGSVLSSI 484

Query: 516 AKLS--SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           A     S   G++ H+ I K G   +  V SAL++MY K G I  +   F     KN V 
Sbjct: 485 ASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVA 544

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W  +I  +A++G  +  + L+KDM   GVKPD ITF+A++TAC   G+VD G ++FNSM 
Sbjct: 545 WTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMV 604

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
            DH +EP  +HY+ M+D LGRAG   EAE  + ++P      + + LL +CR+H NV +A
Sbjct: 605 KDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMA 664

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           KR A++L  ++P  S  Y L++N+Y+  G W+ +  +R+ M E  + K+  +S
Sbjct: 665 KRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFS 717



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 141/584 (24%), Positives = 280/584 (47%), Gaps = 71/584 (12%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N++++  CK+   + A  +F+ +   ++VSWN ++S   R+   + AL+   +M+  G  
Sbjct: 117 NSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRS---DDALNFALRMNFTGVA 173

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
              +T  +V    +       G + H  ++K GLD  ++V NAL+++Y++C     A  V
Sbjct: 174 FDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRV 233

Query: 178 FEEMSEPNEVTFTAMMSGLAKT-DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           F+EM   + V++ AM+SG A+  +  +EA+ +F  M+++ + +D VS +  +  C   G 
Sbjct: 234 FDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISAC---GH 290

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
           G E ++             G+Q+H L +K+G++  + + N L+  Y+K  D++ A+++F 
Sbjct: 291 GKEFEL-------------GRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFE 337

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
           ++ +R+VVSW  MI+          A  L   M+  G  P++VT + ++ A      ++ 
Sbjct: 338 SIIDRNVVSWTTMIS-----ISEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEE 392

Query: 357 GR-----------------------------------EMFDSMPSPSVSSWNAMLSSYSQ 381
           G+                                   ++F+ +    + SWN+++S Y+Q
Sbjct: 393 GQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQ 452

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI--LESGKQVHAASLKTASHIDN 439
           +   +EA++ F        +P+  T   +LSS A+     +  G++ H+  LK   + + 
Sbjct: 453 NGLWQEALQTFLSALMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNP 511

Query: 440 YVASGLIGIYSKCQRNELAER--VFHRIPELDIVCWNSMIAGLSLNSLDIEAFM-FFKQM 496
            V+S L+ +Y+K  R  + E   VF   P  + V W ++I+  + +  D EA M  FK M
Sbjct: 512 IVSSALLDMYAK--RGSICESLGVFSETPLKNEVAWTAIISAHARHG-DYEAVMNLFKDM 568

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGD 555
            +  + P   +F  V+++C +      G Q+   + KD  +       S++++M  + G 
Sbjct: 569 EREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGR 628

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQ-NGYGDEAVRLYKDMI 598
           +  A +F   + G   ++  + + G  + +G  D A R+  D+I
Sbjct: 629 LKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLI 672



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 231/506 (45%), Gaps = 96/506 (18%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +  + G  LH+ IL+ GL  + F+ N LI +YS+C     A+ +FD+M +KD+ SWNA+L
Sbjct: 190 EGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAML 249

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           S   +  +                            +GLE  A+ V+ +M  EG    H+
Sbjct: 250 SGYAQEGN----------------------------SGLE--AILVFLEMLKEGMKLDHV 279

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           +      A     + E GR+ H L +KIG D ++ V N L+S Y+KC   + A  VFE +
Sbjct: 280 SFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESI 339

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + N V++T M+S +++ D    A  +F  M R  V  + V+   ++     +    E  
Sbjct: 340 IDRNVVSWTTMIS-ISEED----ATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEE-- 392

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                         GQ +H + +K  F ++L++SNSL+ MYAK   M  +  +F  L  R
Sbjct: 393 --------------GQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYR 438

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELL--------------------------------QRM 329
            ++SWN +I+GY Q     +A++                                  QR 
Sbjct: 439 EIISWNSLISGYAQNGLWQEALQTFLSALMESRPNEFTFGSVLSSIASAEAISMRHGQRC 498

Query: 330 KS----CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
            S     G   + + S  +L    + G I     +F   P  +  +W A++S++++  ++
Sbjct: 499 HSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDY 558

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI-----DNY 440
           +  + LF++M+  GVKPD  T   ++++C   G++++G Q+  + +K   H+     ++Y
Sbjct: 559 EAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVK--DHLIEPSPEHY 616

Query: 441 VASGLIGIYSKCQRNELAERVFHRIP 466
             S ++ +  +  R + AE    +IP
Sbjct: 617 --SSMVDMLGRAGRLKEAEEFVGQIP 640


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 208/708 (29%), Positives = 356/708 (50%), Gaps = 53/708 (7%)

Query: 75  KLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALL 134
           K+FDEM +R   +WN LI A V NG    AL +Y  M  EG      +   + KA   L 
Sbjct: 117 KVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLR 176

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE-VTFTAMM 193
           D+  G   H +++K+G +   ++ NAL+S+YAK      A  +F+   E  + V + +++
Sbjct: 177 DIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSIL 236

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           S  + + + +E L++FR M     + +S ++ S L  C  EG              FS  
Sbjct: 237 SSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTAC--EG--------------FSYA 280

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+++H   +K     ++++ N+L+ MYA+ G M  A  I   +    VV+WN +I GY
Sbjct: 281 KLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGY 340

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------------- 360
            Q     +A++    M + G +PDEV+  +++ A  R  ++  G E+             
Sbjct: 341 VQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNL 400

Query: 361 ----------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                                 F  M    + SW  +++ Y+ ++ H EA++LFR++  +
Sbjct: 401 LVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKK 460

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
            ++ D   L  IL +C+ +  +   K++H   L+    ID  + + L+ +Y KC+    A
Sbjct: 461 RMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYA 519

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            RVF  I   D+V W SMI+  +LN  + EA   F++M +  +     +   +LS+ A L
Sbjct: 520 SRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASL 579

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           S+  +GR++H  + + G+  +  +  A+++MY  CGD+  A+  FD +  K  + +  MI
Sbjct: 580 SALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 639

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
           + Y  +G G  +V L+  M    V PD I+F+A+L ACSH+GL+D G      M+L++ +
Sbjct: 640 NAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKL 699

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
           EP  +HY C++D LGRA    EA   +  M  +    +W  LL++CR H+   + + AA+
Sbjct: 700 EPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQ 759

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            L  L+PKN     L++N+++  GRW+D+  VR  M  + + K P  S
Sbjct: 760 RLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCS 807



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 224/462 (48%), Gaps = 46/462 (9%)

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           LL++  K+  + S E +F  + +R+  +WN +I  Y    +   A+ + + M+  G   D
Sbjct: 103 LLELCGKSRAL-SQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLD 161

Query: 338 EVTSINMLVACVRSGDIKTGRE-----------------------------------MFD 362
             +   +L AC +  DI++G E                                   +FD
Sbjct: 162 LYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFD 221

Query: 363 -SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
            S        WN++LSSYS S    E ++LFREMQ  G   +  T+   L++C      +
Sbjct: 222 ASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAK 281

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            GK++HAA LK+    + YV + LI +Y++C +   A R+   +   D+V WNS+I G  
Sbjct: 282 LGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYV 341

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N +  EA  FF  M      P + S  +V+++  +LS+   G ++HA + K G+ +++ 
Sbjct: 342 QNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLL 401

Query: 542 VGSALIEMYCKCG-DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           VG+ LI+MY KC    Y  R F  MMH K+ ++W  +I GYA N    EA++L++D+   
Sbjct: 402 VGNTLIDMYSKCNLTCYMGRAFL-MMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKK 460

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
            ++ D++   +IL ACS    + +  EI   +     ++ ++ +   ++D  G+  +   
Sbjct: 461 RMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTVIQNE--LVDVYGKCRNMGY 518

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           A  + + +  K D V W  ++SS  L+ N    +  A ELFR
Sbjct: 519 ASRVFESIKGK-DVVSWTSMISSSALNGN----ENEAVELFR 555



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 205/457 (44%), Gaps = 89/457 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA +L++    + ++CN LI +Y++C     A  +   M + D             
Sbjct: 283 GKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNAD------------- 329

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             VV+WN+LI   V+N + ++AL  +  M   G  P  ++L SV
Sbjct: 330 ------------------VVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSV 371

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             AS  L ++  G   H  VIK G D N+ V N L+ +Y+KC  T +    F  M E + 
Sbjct: 372 IAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDL 431

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++T +++G A  D  VEAL++FR + +K + ID + L S+L  C+     ++S +    
Sbjct: 432 ISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSV----LKSMLIV-- 485

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                     +++HC  ++ G   D  + N L+D+Y K  +M  A  +F ++  + VVSW
Sbjct: 486 ----------KEIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSW 534

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE---------------------------- 338
             MI+         +A+EL +RM   G   D                             
Sbjct: 535 TSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLR 594

Query: 339 ----------VTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                     V  ++M   C   GD+++ + +FD +    +  + +M+++Y      K +
Sbjct: 595 KGFCLEGSIAVAVVDMYACC---GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAS 651

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           ++LF +M+   V PD  +   +L +C+  G+L+ G++
Sbjct: 652 VELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRR 688



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 168/360 (46%), Gaps = 48/360 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           +AG  LHA+++++G   +  + N LI++YSKCN T      F  M  KD+ SW  I++  
Sbjct: 382 LAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGY 441

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
             +D    A +LF ++ ++             R  ++E                  + L 
Sbjct: 442 ALNDCHVEALQLFRDVAKK-------------RMEIDE------------------MMLG 470

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+ +A + L  +   +  H  +++ GL   + + N L+ +Y KC    +A  VFE +   
Sbjct: 471 SILRACSVLKSMLIVKEIHCHILRKGLIDTV-IQNELVDVYGKCRNMGYASRVFESIKGK 529

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++T+M+S  A      EA+E+FR M    +  DSV+L     +C      + S   +
Sbjct: 530 DVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVAL-----LC------ILSAAAS 578

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            S  K  R +HG       ++ GF  +  ++ +++DMYA  GD+ SA+ +F  +  + ++
Sbjct: 579 LSALKKGREIHG-----YLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLL 633

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
            +  MI  YG       ++EL  +M+     PD ++ + +L AC  +G +  GR     M
Sbjct: 634 QYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIM 693



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 113/234 (48%), Gaps = 32/234 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+ +  K +H HILR GL  DT + N L+++Y KC N   A  +F+ +  KD+ SW +++
Sbjct: 480 KSMLIVKEIHCHILRKGLI-DTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMI 538

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           S+                             SAL  NG E +A+ ++ +M+  G +   +
Sbjct: 539 SS-----------------------------SAL--NGNENEAVELFRRMAETGLLADSV 567

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            L  +  A+ +L  ++ GR  HG +++ G      +A A++ +YA CG  + A  VF+ +
Sbjct: 568 ALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI 627

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
                + +T+M++          ++E+F  M  + VS D +S  ++L  C+  G
Sbjct: 628 ERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAG 681


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 203/632 (32%), Positives = 333/632 (52%), Gaps = 56/632 (8%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           +N    N ++S Y K      A  +FE M   NEV++T M+ G ++ ++  EA  ++  M
Sbjct: 75  RNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEM 134

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
            R  V  D ++ +++L                  D    + V   Q+H   I+ GF A L
Sbjct: 135 CRSGVKPDHITFATLLS--------------GFDDTTTLKEV--LQIHSHIIRFGFSASL 178

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            + NSL+D Y K   +D A  +FS +P +  VS+NVMI GY +     +A++L  +M++ 
Sbjct: 179 IVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNM 238

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGRE--------------------------------- 359
            F+P   T   ML   V S D+  G++                                 
Sbjct: 239 DFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLA 298

Query: 360 --MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL--AIILSSCA 415
             +FD MP     S+N +++ Y+ +  ++++  LF+ +Q  G   DR     A +LS  A
Sbjct: 299 KNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQ--GTSFDRKNFPFATMLSVAA 356

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
               L  G+Q HA ++ T +  +  V + L+ +Y+KC++ E A R+F  +   + V W +
Sbjct: 357 IELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTA 416

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           +I+         EA   FK+M +  ++  Q +FA+ L + A L+S   G+Q+H+ + + G
Sbjct: 417 IISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLG 476

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
            ++ +F GS L++MY  CG +  A + F  M  +N V WN +I  Y+QNG  +     + 
Sbjct: 477 LLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFA 536

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
           DMI SG+ PD ++F+++LTACSH GLV+  +  FNSM   + ++P   HY  MID L R+
Sbjct: 537 DMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRS 596

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYSLL 714
           G F+EAE LI EMP + D V+W  +L+SCR+H N  LAK+AA++LF++D  +++A Y  +
Sbjct: 597 GRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNM 656

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +NIY+  G+W++   V++ M E  + K  AYS
Sbjct: 657 SNIYAEAGKWENAAKVKKAMRERGVKKVTAYS 688



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 258/541 (47%), Gaps = 53/541 (9%)

Query: 12  AHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLE 71
           A I++ G   +    N  ++   + N    A+ LFD+MP+++  S N ++S   KS +L 
Sbjct: 35  ARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLF 94

Query: 72  FAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
            A +LF+ M  RN VSW  +I    +N   ++A ++Y +M   G  P HIT A++     
Sbjct: 95  RARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFD 154

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
               ++   + H  +I+ G   ++ V N+L+  Y K      A  +F EM   + V+F  
Sbjct: 155 DTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNV 214

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           M++G  K     EAL++F  M          + +++LG+      G E  +F        
Sbjct: 215 MITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGM----SVGSEDVIF-------- 262

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               GQQ+H L IK  +  D+ ++N+LLD Y+K+  +D A+ +F  +PE   VS+N++I 
Sbjct: 263 ----GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIIT 318

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------ 359
           GY    Q  K+ +L +R++   F+        ML       ++  GR+            
Sbjct: 319 GYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVS 378

Query: 360 -----------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                  +F ++   +   W A++S Y Q   H+EA+K+F+EM 
Sbjct: 379 EVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMN 438

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
              V  D+ T A  L + A +  +  GKQ+H++ ++       +  S L+ +Y+ C   +
Sbjct: 439 RENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMK 498

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA-FMFFKQMRQNEMYPTQFSFATVLSSC 515
            A  VF  +P+ +IVCWN++I+  S N  D EA F  F  M ++ +YP   SF +VL++C
Sbjct: 499 DAIEVFKEMPDRNIVCWNALISAYSQNG-DAEATFSSFADMIESGLYPDSVSFLSVLTAC 557

Query: 516 A 516
           +
Sbjct: 558 S 558



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 223/500 (44%), Gaps = 68/500 (13%)

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV- 308
           FS  +    V    +K GF+ ++   N  L    +   +  A  +F  +P R+  S N+ 
Sbjct: 24  FSERIVDIPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMM 83

Query: 309 ------------------------------MIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
                                         MI GY Q  Q  +A  L   M   G +PD 
Sbjct: 84  VSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDH 143

Query: 339 VTSINML-----------VACVRSGDIKTG------------------------REMFDS 363
           +T   +L           V  + S  I+ G                         ++F  
Sbjct: 144 ITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSE 203

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           MP+    S+N M++ Y++    +EA+KLF +M+    +P   T A +L        +  G
Sbjct: 204 MPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFG 263

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           +Q+H  ++KT+   D +VA+ L+  YSK    +LA+ +F  +PELD V +N +I G + N
Sbjct: 264 QQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWN 323

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               ++F  FK+++        F FAT+LS  A   +   GRQ HAQ      V+++ VG
Sbjct: 324 GQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVG 383

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           +AL++MY KC     A + F  +  +N+V W  +I  Y Q G+ +EA++++K+M    V 
Sbjct: 384 NALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVH 443

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
            D  TF + L A ++   V +G ++ +S+ +  G+   +   + ++D     G   +A  
Sbjct: 444 GDQATFASTLKASANLASVSLGKQLHSSV-IRLGLLSSVFSGSVLVDMYANCGSMKDAIE 502

Query: 664 LIDEMPCKDDPVIWEVLLSS 683
           +  EMP + + V W  L+S+
Sbjct: 503 VFKEMPDR-NIVCWNALISA 521



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 224/511 (43%), Gaps = 96/511 (18%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H+HI+R G      + N L++ Y K      A  LF +MP KD  S+N           
Sbjct: 165 IHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNV---------- 214

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                                +I+   + G  E+AL ++ +M N  F P+  T A++   
Sbjct: 215 ---------------------MITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGM 253

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
           S    DV  G++ HGL IK     +I+VANALL  Y+K  +   A  +F+EM E + V++
Sbjct: 254 SVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSY 313

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             +++G A   +  ++ ++F+ +   +    +   +++L V A E            +  
Sbjct: 314 NIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIE-----------LNLS 362

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
             R  H Q V    +     +++ + N+L+DMYAK    + A  IF+NL  R+ V W  +
Sbjct: 363 MGRQTHAQAVVTTAV-----SEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAI 417

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVT-------SINM-----------------L 345
           I+ Y QK    +A+++ + M       D+ T       S N+                 L
Sbjct: 418 ISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGL 477

Query: 346 VACVRSGDI-----------KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           ++ V SG +           K   E+F  MP  ++  WNA++S+YSQ+ + +     F +
Sbjct: 478 LSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFAD 537

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILE-------SGKQVHAASLKTASHIDNYVASGLIG 447
           M   G+ PD  +   +L++C+  G++E       S  QV+    +   +      + +I 
Sbjct: 538 MIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHY------ATMID 591

Query: 448 IYSKCQRNELAERVFHRIP-ELDIVCWNSMI 477
           +  +  R   AE +   +P E D V W+S++
Sbjct: 592 VLCRSGRFNEAENLISEMPFEPDEVMWSSVL 622



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 200/462 (43%), Gaps = 55/462 (11%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G+ +H   ++     D F+ N L++ YSK +    A++LFD+MP  D  S+N I++  
Sbjct: 261 IFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITG- 319

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                 +W         NG  EK+  ++ ++    F   +   A
Sbjct: 320 ---------------------YAW---------NGQYEKSFDLFKRLQGTSFDRKNFPFA 349

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++   +   L++  GR+ H   +       + V NAL+ +YAKC   + A  +F  ++  
Sbjct: 350 TMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYR 409

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V +TA++S   +     EAL+MF+ M R+ V  D  + +S L   A            
Sbjct: 410 NSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASA------------ 457

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
              N  S ++ G+Q+H   I+LG  + +   + L+DMYA  G M  A  +F  +P+R++V
Sbjct: 458 ---NLASVSL-GKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIV 513

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
            WN +I+ Y Q   +         M   G  PD V+ +++L AC   G ++     F+SM
Sbjct: 514 CWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSM 573

Query: 365 PS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                  P    +  M+    +S    EA  L  EM F   +PD    + +L+SC     
Sbjct: 574 TQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPF---EPDEVMWSSVLNSCRIHKN 630

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            +  K+      K  +  D      +  IY++  + E A +V
Sbjct: 631 QDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKV 672



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 157/348 (45%), Gaps = 53/348 (15%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA++    K +  E A ++F  +  RN V W  +IS  V+ G  E+AL ++ +M+ E   
Sbjct: 384 NALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVH 443

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
               T AS  KAS  L  V  G++ H  VI++GL  +++  + L+ +YA CG  K A+ V
Sbjct: 444 GDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEV 503

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+EM + N V + A++S  ++          F  MI   +  DSVS  SVL  C+  G  
Sbjct: 504 FKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLV 563

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
            ++  +  S           QV+ L  +    A      +++D+  ++G  + AE + S 
Sbjct: 564 EKALWYFNS---------MTQVYKLDPRRKHYA------TMIDVLCRSGRFNEAENLISE 608

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--RSGDI- 354
           +P                                  FEPDEV   ++L +C   ++ D+ 
Sbjct: 609 MP----------------------------------FEPDEVMWSSVLNSCRIHKNQDLA 634

Query: 355 -KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
            K   ++F        +++  M + Y+++   + A K+ + M+ RGVK
Sbjct: 635 KKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVK 682


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 209/669 (31%), Positives = 346/669 (51%), Gaps = 54/669 (8%)

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
             P      S+ K   A   +   ++ H  +I  GL  +I + + L++ YA CG+  +A 
Sbjct: 17  LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGL-LSIDIRSVLVATYAHCGYVHNAR 75

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSVSLSSVLGVCARE 234
            +F+E+ +   + +  M+          EA+++F  M+  K    D+ +   V+  C+ E
Sbjct: 76  KLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACS-E 134

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
              VE               +G+ +H LT+   F + L + NSLL MY   G+++ A  +
Sbjct: 135 LLLVE---------------YGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKV 179

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------ 348
           F  + E+SVVSWN MI GY +   +  A+ +  +M   G E D  + +++L AC      
Sbjct: 180 FDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKEL 239

Query: 349 ----------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                                        + G +   R +FD+M    V SW +M++ Y 
Sbjct: 240 EVGRRVHGLVEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYI 299

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
            + + K A+ LF+ MQ  G++P+  T+A+IL +CA++  L+ G+ +H   +K   + +  
Sbjct: 300 LNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVA 359

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           V + LI +Y+KC    L+  VF R      V WN++++G   N L  EA   FK+M    
Sbjct: 360 VETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEG 419

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           +     +  ++L +   L+       +++ + + G+V++I V ++LI++Y KCG +  A 
Sbjct: 420 VEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAH 479

Query: 561 QFFDMM--HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           + F+ +    ++   W+ +I GY  +G+G+ AV L+K M+ SGVKP+D+TF ++L +CSH
Sbjct: 480 KIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSH 539

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
           +G+VD G+ +F  M  DH   P  DHYTCM+D LGRAG   EA  LI  MP      +W 
Sbjct: 540 AGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWG 599

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC 738
            LL +C +H NV L + AA  LF L+P N+  Y LLA +Y++LGRW+D   VR+ M +  
Sbjct: 600 ALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIG 659

Query: 739 IVKDPAYSL 747
           + K PA+SL
Sbjct: 660 LRKAPAHSL 668



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 157/547 (28%), Positives = 250/547 (45%), Gaps = 87/547 (15%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LHAH++ +GL     + + L+  Y+ C   H+A+                        
Sbjct: 41  KQLHAHLITSGLLSID-IRSVLVATYAHCGYVHNAR------------------------ 75

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASV 126
                  KLFDE+ +R  + +N +I   +  G   +A+ V+ +M  ++   P + T   V
Sbjct: 76  -------KLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFV 128

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA + LL VE+GR  HGL +      +++V N+LL++Y  CG  + A  VF+ M E + 
Sbjct: 129 IKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSV 188

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M++G  K      AL +F  M+   V ID  S+ SVL  C   G   E +V  + 
Sbjct: 189 VSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPAC---GYLKELEVGRRV 245

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                  V G+++              +SN+L+DMYAK G MD A ++F N+ ER VVSW
Sbjct: 246 HGLVEEKVLGKKI--------------VSNALVDMYAKCGSMDEARLVFDNMVERDVVSW 291

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
             MI GY     +  A+ L + M+  G  P+ VT   +L+AC    ++K GR        
Sbjct: 292 TSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMK 351

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +F          WNA+LS    ++   EAI L
Sbjct: 352 QRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGL 411

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F++M   GV+ +  T   +L +   +  L+    +++  +++    +  VA+ LI IYSK
Sbjct: 412 FKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSK 471

Query: 452 CQRNELAERVFHRIP--ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           C   E A ++F+ IP    DI  W+ +IAG  ++     A   FKQM Q+ + P   +F 
Sbjct: 472 CGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFT 531

Query: 510 TVLSSCA 516
           +VL SC+
Sbjct: 532 SVLQSCS 538



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 215/433 (49%), Gaps = 32/433 (7%)

Query: 47  DKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALS 106
           +K+  K I S NA++    K   ++ A  +FD M ER+VVSW ++I+  + NG  + ALS
Sbjct: 251 EKVLGKKIVS-NALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALS 309

Query: 107 VYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYA 166
           ++  M  EG  P  +T+A +  A  +L +++ GR  HG V+K  L   + V  +L+ +YA
Sbjct: 310 LFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYA 369

Query: 167 KCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS 226
           KC     +  VF   S    V + A++SG        EA+ +F+ M+ + V I++ + +S
Sbjct: 370 KCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNS 429

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           +L        G+ +D+  Q  N          ++   ++ GF +++ ++ SL+D+Y+K G
Sbjct: 430 LL-----PAYGILADL--QPVN---------NINSYLMRSGFVSNIQVATSLIDIYSKCG 473

Query: 287 DMDSAEVIFSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
            ++SA  IF+ +P   + +  W+++IAGYG       A+ L ++M   G +P++VT  ++
Sbjct: 474 SLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSV 533

Query: 345 LVACVRSGDIKTGREMF-----DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           L +C  +G +  G  +F     D    P+   +  M+    ++    EA  L + M F  
Sbjct: 534 LQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFM- 592

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASL--KTASHIDNYVASGLIGIYSKCQRNEL 457
             P       +L +C     +E G +V A  L      +  NYV   L  +Y+   R E 
Sbjct: 593 --PGHAVWGALLGACVMHENVELG-EVAARWLFELEPGNTGNYVL--LAKLYAALGRWED 647

Query: 458 AERVFHRIPELDI 470
           AE V  R+ ++ +
Sbjct: 648 AENVRQRMDDIGL 660


>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
          Length = 788

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 204/626 (32%), Positives = 323/626 (51%), Gaps = 82/626 (13%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           +K++     ++    K G  + AV ++E     +   FTAM+SG  + +   +A  +FR 
Sbjct: 177 EKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFTVFRK 236

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M+  +V  + V+L  V+  C   G   E D+        +  V G  V C      FE  
Sbjct: 237 MLTCSVRPNVVTLICVIKACVGAG---EFDL--------AMGVVGLAVKCNL----FEKS 281

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + + NSL+ +Y + GD  +A  +F ++  R VVSW  ++  Y                  
Sbjct: 282 IEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADL--------------- 326

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                               GD+   R + D+MP+ +  SW  +++ + Q  +  EA+KL
Sbjct: 327 --------------------GDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKL 366

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           + +M   G +P+ +  + +LS+CA +  L  G ++HA +LK  S  + +V+S LI +Y K
Sbjct: 367 YSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCK 426

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ------------- 498
           C++   A+RVF+ +PE + VCWNS+I+G S N   +EA   F +M               
Sbjct: 427 CKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGY 486

Query: 499 ----------NEMY--------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
                     N  Y        P + + ++VL +CA L S   GR VHA+I K G  ++I
Sbjct: 487 AENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNI 546

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           F+G+AL +MY K GD+  +R+ F  M  KN +TW  M+ G A+NG+ +E++ L++DMI +
Sbjct: 547 FMGTALCDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIEN 606

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G+ P++ TF+AIL ACSH GLV+  +  F +MQ  HG+ P   HYTCM+D L RAG   E
Sbjct: 607 GIAPNEHTFLAILFACSHCGLVEQAIHYFETMQA-HGIPPKSKHYTCMVDVLARAGCLPE 665

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           AE L+ ++  + D   W  LLS+C  + N  + +RAA++L  L+  N+A Y LL+N+Y+S
Sbjct: 666 AEELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYAS 725

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
            G+W D    R LM    + KD   S
Sbjct: 726 CGKWKDAAETRILMQGASLKKDAGCS 751



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 146/611 (23%), Positives = 246/611 (40%), Gaps = 161/611 (26%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYS----------------------------------K 35
           LHAH LR+GL  D  + + L+  Y+                                  K
Sbjct: 102 LHAHALRSGLATDRSVASNLLTAYAAFARAGDRDQAFRDCVAADAASSFTYDFMVSEHVK 161

Query: 36  CNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISAL 95
             +  SA+ LF  MP K + S+  ++ A  K   +  A +L++  P  +V  +  +IS  
Sbjct: 162 AGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGF 221

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL-DKN 154
           VRN L + A +V+ KM      P  +TL  V KA     + +      GL +K  L +K+
Sbjct: 222 VRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKS 281

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM------MSGLAKTDRVV----- 203
           I V N+L++LY + G    A  VF++M   + V++TA+      +  L    RV+     
Sbjct: 282 IEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLDAMPA 341

Query: 204 --------------------EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
                               EAL+++  M+      +    SSVL  CA        D+ 
Sbjct: 342 RNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACA-----TLQDLR 396

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK------------------- 284
                       G ++H   +K+G   +L +S+SL+DMY K                   
Sbjct: 397 G-----------GTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNT 445

Query: 285 ------------NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
                       NG M  AE +F+ +P R+ VSWN MI+GY +  +   A+     M + 
Sbjct: 446 VCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLAS 505

Query: 333 GFEPDEVTSINMLVAC-----------------------------------VRSGDIKTG 357
           G  P E+T  ++L+AC                                    +SGD+ + 
Sbjct: 506 GHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSS 565

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R +F  MP  +  +W AM+   +++   +E+I LF +M   G+ P+  T   IL +C+  
Sbjct: 566 RRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHC 625

Query: 418 GILESG------KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI-PELDI 470
           G++E         Q H    K+  +      + ++ + ++      AE +  ++  ELD 
Sbjct: 626 GLVEQAIHYFETMQAHGIPPKSKHY------TCMVDVLARAGCLPEAEELLMKVSSELDT 679

Query: 471 VCWNSMIAGLS 481
             W+S+++  S
Sbjct: 680 SSWSSLLSACS 690



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 191/400 (47%), Gaps = 33/400 (8%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G  +HA+ L+ G   + F+ + LI++Y KC     AQ +F+ +P K+   WN+++S   
Sbjct: 397 GGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYS 456

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +  +  A  LF++MP RN VSWN +IS    N     AL+ +  M   G +P  ITL+S
Sbjct: 457 WNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSS 516

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   L  +E GR  H  ++K+G++ NI++  AL  +YAK G    +  VF +M E N
Sbjct: 517 VLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRVFYQMPEKN 576

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +T+TAM+ GLA+     E++ +F  MI   ++ +  +  ++L  C+   CG    +  Q
Sbjct: 577 NITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSH--CG----LVEQ 630

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL-PERSVV 304
           + + F       Q H      G          ++D+ A+ G +  AE +   +  E    
Sbjct: 631 AIHYF----ETMQAH------GIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTS 680

Query: 305 SWNVMIAG---YGQK---YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
           SW+ +++    Y  K    ++ K +  L++  + G+    V   NM  +C +  D    R
Sbjct: 681 SWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGY----VLLSNMYASCGKWKDAAETR 736

Query: 359 EMFD--SMPSPSVSSWNAMLSSY----SQSENHKEAIKLF 392
            +    S+   +  SW  +   Y    S  E H  +++++
Sbjct: 737 ILMQGASLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIY 776


>gi|302790562|ref|XP_002977048.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
 gi|300155024|gb|EFJ21657.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
          Length = 883

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 229/763 (30%), Positives = 377/763 (49%), Gaps = 94/763 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  I          +   L+++Y++C     A+ +FD++ +KD             
Sbjct: 165 GRRIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKD------------- 211

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             V+ WN++I+A  + G   +A  +  +M   G   +  T A +
Sbjct: 212 ------------------VICWNSMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGI 253

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++L   E G++ H   +  GL  +I V NAL+S+Y KC     A  VF ++   + 
Sbjct: 254 LGACSSL---EEGKKIHSRALARGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAHDV 310

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TA++    +  R  EALE+++ M  + +  D V+ +SVL  C+             +
Sbjct: 311 VSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSN-----------TN 359

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE-RSVVS 305
           D +  + +H +    L  K GF +D  L  +L++MY K G +D +  IF +  + ++VV 
Sbjct: 360 DLELGQALHAR---LLARKDGF-SDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVV 415

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR--------------- 350
           WN MI  Y Q+  S  A++L   MK  G +PDE T  ++L AC                 
Sbjct: 416 WNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELKDLEKGEQVHVEII 475

Query: 351 ---------------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                 G+I+  + +F  M +  V SW  ++S+Y Q  + + A+
Sbjct: 476 ASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRAL 535

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +L+R M   GV+P   T+  ++++C+AM  L  G  +HA +  +    D  V + LI +Y
Sbjct: 536 RLYRRMLVEGVQPTEVTMLAVIAACSAMESLWEGIVIHALT-DSMFFTDTAVQAALISMY 594

Query: 450 SKCQRNELAERVFHRIPELD--IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           ++C+R +LA +VF ++  L+    CWN+M+A  S   L  E    + +M    +   + +
Sbjct: 595 ARCRRLDLACQVFRQVRHLESSANCWNAMLAAYSQLGLPEEGIRLYWEMSSTGIKANEGT 654

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           FA  L++C+ L +  +G ++H Q+    Y +D+ + +AL+ MY KC  +  A   F+ + 
Sbjct: 655 FAGALAACSMLGAVREGYRIHEQVSSSRYSSDLSLKTALVHMYAKCNRVDAAFHVFEQLQ 714

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
             + V WN MI  YAQNGY   A+ LY  M+  G KP + TF+ +  AC H+GLVD    
Sbjct: 715 -PDVVAWNAMIAAYAQNGYAWHALELYSKML-HGYKPLEPTFLCVFLACGHAGLVDECKW 772

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F SM  D  + P  DHY+C++  L RAG   EAE L+  MP     V W  LL +CR H
Sbjct: 773 YFQSMIEDR-ITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGACRTH 831

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLA--NIYSSLGRWDDLR 728
            +++ A+RAA+E   LD ++SAPY LL+  NI+++ G  D LR
Sbjct: 832 GDLKRARRAADEAMELDRQDSAPYVLLSNVNIFAASGCLDHLR 874



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 186/662 (28%), Positives = 319/662 (48%), Gaps = 91/662 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HAHI+ +GL  D FL + L+++Y KC +                            
Sbjct: 64  GRRIHAHIVASGLASDGFLGDHLLQMYGKCGSV--------------------------- 96

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            DD   A ++F  +P R++ SWN +I+A  +N    KA+ ++  M + G  P   TL+SV
Sbjct: 97  -DD---AIQVFHALPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSV 152

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++L D+E GRR HG +        I V   L+ +YA+CG  + A  VF+ +   + 
Sbjct: 153 LGACSSLRDLEEGRRIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDV 212

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           + + +M++  A+     +A ++   M    V     + + +LG C               
Sbjct: 213 ICWNSMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGILGAC--------------- 257

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S    G+++H   +  G  + + + N+L+ MY K  ++D+A  +FS +    VVSW
Sbjct: 258 ----SSLEEGKKIHSRALARGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAHDVVSW 313

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
             +I  Y Q  ++ +A+EL ++M+  G EPD+VT  ++L AC  + D++ G+        
Sbjct: 314 TALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTNDLELGQALHARLLA 373

Query: 359 ----------------------------EMFDSMP-SPSVSSWNAMLSSYSQSENHKEAI 389
                                       E+F S   + +V  WNAM+++Y Q    + A+
Sbjct: 374 RKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAV 433

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN-YVASGLIGI 448
            L+  M+ RG+ PD +TL+ ILS+CA +  LE G+QVH   + +     N  V + LI +
Sbjct: 434 DLYDMMKQRGLDPDESTLSSILSACAELKDLEKGEQVHVEIIASRDCSQNPVVLNALISM 493

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+ C     A+ VF R+   D+V W  +I+          A   +++M    + PT+ + 
Sbjct: 494 YASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEVTM 553

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMH 567
             V+++C+ + S ++G  +HA +    +  D  V +ALI MY +C  +  A Q F  + H
Sbjct: 554 LAVIAACSAMESLWEGIVIHA-LTDSMFFTDTAVQAALISMYARCRRLDLACQVFRQVRH 612

Query: 568 GKNTVT-WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
            +++   WN M+  Y+Q G  +E +RLY +M ++G+K ++ TF   L ACS  G V  G 
Sbjct: 613 LESSANCWNAMLAAYSQLGLPEEGIRLYWEMSSTGIKANEGTFAGALAACSMLGAVREGY 672

Query: 627 EI 628
            I
Sbjct: 673 RI 674



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/533 (28%), Positives = 263/533 (49%), Gaps = 55/533 (10%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T A++ K       +  GRR H  ++  GL  + ++ + LL +Y KCG    A+ VF  +
Sbjct: 47  TYAALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHAL 106

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              +  ++  +++  AK     +A+EMFR M    +  DS +LSSVLG C+         
Sbjct: 107 PRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACS--------- 157

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
             +  D +  R +HG+      I  G F++ + +   L+ MYA+ G +  A  +F  +  
Sbjct: 158 --SLRDLEEGRRIHGR------ISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIEN 209

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------- 349
           + V+ WN MIA Y Q   S +A +L + M+  G +  + T   +L AC            
Sbjct: 210 KDVICWNSMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGILGACSSLEEGKKIHSR 269

Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                +  ++   R +F  + +  V SW A++ +Y+Q   ++EA
Sbjct: 270 ALARGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREA 329

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL-KTASHIDNYVASGLIG 447
           ++L+++M+  G++PD+ T   +LS+C+    LE G+ +HA  L +     D  + + LI 
Sbjct: 330 LELYKQMEGEGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDGFSDGVLVAALIN 389

Query: 448 IYSKCQRNELAERVFHRIPELD-IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
           +Y KC R +L+  +F    +   +V WN+MI           A   +  M+Q  + P + 
Sbjct: 390 MYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDES 449

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQI--EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           + +++LS+CA+L    +G QVH +I   +D   N + + +ALI MY  CG+I  A+  F 
Sbjct: 450 TLSSILSACAELKDLEKGEQVHVEIIASRDCSQNPVVL-NALISMYASCGEIREAKAVFK 508

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            M  ++ V+W  +I  Y Q G    A+RLY+ M+  GV+P ++T +A++ ACS
Sbjct: 509 RMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEVTMLAVIAACS 561



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 149/471 (31%), Positives = 232/471 (49%), Gaps = 51/471 (10%)

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+++H   +  G  +D  L + LL MY K G +D A  +F  LP RS+ SWN +IA + 
Sbjct: 63  QGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHALPRRSLFSWNFIIAAFA 122

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------------------- 348
           +     KAIE+ + M S G +PD  T  ++L AC                          
Sbjct: 123 KNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGRRIHGRISSGEFQSGIV 182

Query: 349 ---------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                     R G ++  RE+FD + +  V  WN+M+++Y+Q  +  +A +L  EM+  G
Sbjct: 183 VETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGGHSAQARQLCEEMEGFG 242

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           VK   TT A IL +C++   LE GK++H+ +L         V + LI +Y KC   + A 
Sbjct: 243 VKASDTTFAGILGACSS---LEEGKKIHSRALARGLSSSIIVQNALISMYGKCNELDAAR 299

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           RVF ++   D+V W ++I   + +  + EA   +KQM    M P + +F +VLS+C+  +
Sbjct: 300 RVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTN 359

Query: 520 SSFQGRQVHAQI--EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH-GKNTVTWNE 576
               G+ +HA++   KDG+ + + V +ALI MY KCG +  + + F      K  V WN 
Sbjct: 360 DLELGQALHARLLARKDGFSDGVLV-AALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNA 418

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG----VEIFNSM 632
           MI  Y Q GY   AV LY  M   G+ PD+ T  +IL+AC+    ++ G    VEI  S 
Sbjct: 419 MITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELKDLEKGEQVHVEIIASR 478

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             D    P++     +I      G   EA+ +   M  + D V W +L+S+
Sbjct: 479 --DCSQNPVV--LNALISMYASCGEIREAKAVFKRMKNR-DVVSWTILISA 524



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 205/393 (52%), Gaps = 21/393 (5%)

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
           G   D     ++L    + G +    ++F ++P  S+ SWN ++++++++ + ++AI++F
Sbjct: 75  GLASDGFLGDHLLQMYGKCGSVDDAIQVFHALPRRSLFSWNFIIAAFAKNRHGRKAIEMF 134

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           R M   G+KPD  TL+ +L +C+++  LE G+++H             V +GL+ +Y++C
Sbjct: 135 RSMDSAGIKPDSATLSSVLGACSSLRDLEEGRRIHGRISSGEFQSGIVVETGLVKMYARC 194

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
            R   A  VF RI   D++CWNSMIA  +      +A    ++M    +  +  +FA +L
Sbjct: 195 GRLREAREVFDRIENKDVICWNSMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGIL 254

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
            +C+ L    +G+++H++    G  + I V +ALI MY KC ++  AR+ F  +   + V
Sbjct: 255 GACSSLE---EGKKIHSRALARGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAHDVV 311

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +W  +I  Y Q+G   EA+ LYK M   G++PD +TF ++L+ACS++  +++G  +   +
Sbjct: 312 SWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTNDLELGQALHARL 371

Query: 633 --QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP--VIWEVLLSSCRLHA 688
             + D   + +L     +I+   + G    +  +     CKD    V+W  ++++     
Sbjct: 372 LARKDGFSDGVL--VAALINMYVKCGRLDLSSEIFQS--CKDTKAVVVWNAMITAYEQEG 427

Query: 689 NVRLAKRAAEELFR------LDPKNSAPYSLLA 715
                 RAA +L+       LDP  S   S+L+
Sbjct: 428 Y----SRAAVDLYDMMKQRGLDPDESTLSSILS 456



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 150/308 (48%), Gaps = 9/308 (2%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +QF+     R T A +L  C     L  G+++HA  + +    D ++   L+ +Y KC  
Sbjct: 36  LQFQSPFQVRQTYAALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGS 95

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A +VFH +P   +  WN +IA  + N    +A   F+ M    + P   + ++VL +
Sbjct: 96  VDDAIQVFHALPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGA 155

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C+ L    +GR++H +I    + + I V + L++MY +CG +  AR+ FD +  K+ + W
Sbjct: 156 CSSLRDLEEGRRIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICW 215

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI  YAQ G+  +A +L ++M   GVK  D TF  IL ACS    ++ G +I +S  L
Sbjct: 216 NSMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGILGACSS---LEEGKKI-HSRAL 271

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
             G+   +     +I   G+      A  +  ++    D V W  L+ +   H       
Sbjct: 272 ARGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAH-DVVSWTALIVAYTQHGR----N 326

Query: 695 RAAEELFR 702
           R A EL++
Sbjct: 327 REALELYK 334


>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g55740, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
 gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 830

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 233/779 (29%), Positives = 369/779 (47%), Gaps = 116/779 (14%)

Query: 6   AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            GK +HA IL+NG F   + ++  +L+  Y+KC                           
Sbjct: 88  TGKQIHARILKNGDFYARNEYIETKLVIFYAKC--------------------------- 120

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
               D LE A  LF ++  RNV SW  +I    R GL E AL  + +M      P +  +
Sbjct: 121 ----DALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 176

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +V KA  AL     GR  HG V+K GL+  ++VA++L  +Y KCG    A  VF+E+ +
Sbjct: 177 PNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD 236

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V + A+M G  +  +  EA+ +F  M ++ V    V++S+ L   A  G GVE    
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMG-GVE---- 291

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q H + I  G E D  L  SLL+ Y K G ++ AE++F  + E+ V
Sbjct: 292 -----------EGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDV 340

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           V+WN++I+GY Q+     AI + Q M+    + D VT   ++ A  R+ ++K G+E+   
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCY 400

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           FDS     +  WN +L++Y++S    EA
Sbjct: 401 CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA 460

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           ++LF  MQ  GV P+  T  +I+ S    G ++  K             D ++     GI
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK-------------DMFLQMQSSGI 507

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
                           IP L  + W +M+ G+  N    EA +F ++M+++ + P  FS 
Sbjct: 508 ----------------IPNL--ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 549

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              LS+CA L+S   GR +H  I ++  + + + + ++L++MY KCGDI  A + F    
Sbjct: 550 TVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKL 609

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
                  N MI  YA  G   EA+ LY+ +   G+KPD+IT   +L+AC+H+G ++  +E
Sbjct: 610 YSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIE 669

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           IF  +     ++P L+HY  M+D L  AG   +A  LI+EMP K D  + + L++SC   
Sbjct: 670 IFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQ 729

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
               L    + +L   +P+NS  Y  ++N Y+  G WD++  +RE+M    + K P  S
Sbjct: 730 RKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCS 788



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 155/689 (22%), Positives = 298/689 (43%), Gaps = 91/689 (13%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S+ + +S+L +NG  ++ALS+  +M              + +      D+  G++ H  +
Sbjct: 37  SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI 96

Query: 147 IKIG--LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
           +K G    +N Y+   L+  YAKC   + A  +F ++   N  ++ A++    +      
Sbjct: 97  LKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG 156

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           AL  F  M+   +  D+  + +V   C            A   ++F R VHG       +
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACG-----------ALKWSRFGRGVHG-----YVV 200

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           K G E  + +++SL DMY K G +D A  +F  +P+R+ V+WN ++ GY Q  ++ +AI 
Sbjct: 201 KSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIR 260

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------------- 359
           L   M+  G EP  VT    L A    G ++ G++                         
Sbjct: 261 LFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC 320

Query: 360 ----------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
                     +FD M    V +WN ++S Y Q    ++AI + + M+   +K D  TLA 
Sbjct: 321 KVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLAT 380

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           ++S+ A    L+ GK+V    ++ +   D  +AS ++ +Y+KC     A++VF    E D
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKD 440

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           ++ WN+++A  + + L  EA   F  M+   + P   ++  ++ S  +     + + +  
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFL 500

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
           Q++  G +                                N ++W  M++G  QNG  +E
Sbjct: 501 QMQSSGII-------------------------------PNLISWTTMMNGMVQNGCSEE 529

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+   + M  SG++P+  +    L+AC+H   + +G  I   +  +     ++   T ++
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 589

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR--LAKRAAEELFRLDPKN 707
           D   + G  ++AE +       + P +   ++S+  L+ N++  +A   + E   L P N
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELP-LSNAMISAYALYGNLKEAIALYRSLEGVGLKPDN 648

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSE 736
                 + N+ S+     D+    E+ ++
Sbjct: 649 IT----ITNVLSACNHAGDINQAIEIFTD 673



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 189/375 (50%), Gaps = 16/375 (4%)

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           SPS +S+   +SS  ++   KEA+ L  EM FR ++        IL  C     L +GKQ
Sbjct: 32  SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91

Query: 426 VHAASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           +HA  LK       + Y+ + L+  Y+KC   E+AE +F ++   ++  W ++I      
Sbjct: 92  IHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRI 151

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
            L   A M F +M +NE++P  F    V  +C  L  S  GR VH  + K G  + +FV 
Sbjct: 152 GLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVA 211

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           S+L +MY KCG +  A + FD +  +N V WN ++ GY QNG  +EA+RL+ DM   GV+
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271

Query: 604 PDDITFVAILTACSHSGLVDVG-----VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
           P  +T    L+A ++ G V+ G     + I N M+LD+ +   L ++ C      + G  
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC------KVGLI 325

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
             AEM+ D M  + D V W +++S       V  A     +L RL+ K       LA + 
Sbjct: 326 EYAEMVFDRM-FEKDVVTWNLIISGYVQQGLVEDAIYMC-QLMRLE-KLKYDCVTLATLM 382

Query: 719 SSLGRWDDLRAVREL 733
           S+  R ++L+  +E+
Sbjct: 383 SAAARTENLKLGKEV 397


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 201/662 (30%), Positives = 321/662 (48%), Gaps = 87/662 (13%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC---GWTKHAVPVFE 179
           L+    +STA L     R+ H L++++ L  +  +  +LLS YA        + ++ +  
Sbjct: 5   LSQCLSSSTASLS--QARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSS 62

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            +  P   +F++++   A++      L  F  +    +  D+  L S +  CA       
Sbjct: 63  HLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCA------- 115

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                           GQQ+H      GF  D  +++SL  MY K   +  A  +F  +P
Sbjct: 116 ---------SLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMP 166

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           +R VV W+ MIAGY +     +A EL   M+S G E                        
Sbjct: 167 DRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVE------------------------ 202

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                  P++ SWN ML+ +  +  + EA+ +FR M  +G  PD +T++ +L +   +  
Sbjct: 203 -------PNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLED 255

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE------------ 467
           +  G QVH   +K     D +V S ++ +Y KC   +   RVF  + E            
Sbjct: 256 VVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTG 315

Query: 468 -----------------------LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
                                  L++V W S+IA  S N  D+EA   F+ M+   + P 
Sbjct: 316 LSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPN 375

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
             +  +++ +C  +S+   G+++H    + G  +D++VGSALI+MY KCG I  AR+ FD
Sbjct: 376 AVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFD 435

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            M   N V+WN ++ GYA +G   E + ++  M+ SG KPD +TF  +L+AC+ +GL + 
Sbjct: 436 KMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEE 495

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G   +NSM  +HG+EP ++HY C++  L R G   EA  +I EMP + D  +W  LLSSC
Sbjct: 496 GWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSC 555

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           R+H N+ L + AAE+LF L+P N   Y LL+NIY+S G WD+   +RE+M    + K+P 
Sbjct: 556 RVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPG 615

Query: 745 YS 746
           YS
Sbjct: 616 YS 617



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 229/446 (51%), Gaps = 31/446 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA    +G   D+ + + L  +Y KC+    A+ LFD+MP +D+  W+A+++   +
Sbjct: 123 GQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSR 182

Query: 67  SDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              +E A +LF EM     E N+VSWN +++    NG  ++A+ ++  M  +GF P   T
Sbjct: 183 LGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGST 242

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           ++ V  A   L DV  G + HG VIK GL  + +V +A+L +Y KCG  K    VF+E+ 
Sbjct: 243 VSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVE 302

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG------- 235
           E    +  A ++GL++   V  ALE+F     + + ++ V+ +S++  C++ G       
Sbjct: 303 EMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALE 362

Query: 236 -------CGVESDV-----FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
                   GVE +         +    S  +HG+++HC +++ G   D+++ ++L+DMYA
Sbjct: 363 LFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYA 422

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K G +  A   F  +   ++VSWN ++ GY    ++ + +E+   M   G +PD VT   
Sbjct: 423 KCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTC 482

Query: 344 MLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           +L AC ++G  + G   ++SM       P +  +  +++  S+    +EA  + +EM F 
Sbjct: 483 VLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPF- 541

Query: 399 GVKPDRTTLAIILSSCAAMGILESGK 424
             +PD      +LSSC     L  G+
Sbjct: 542 --EPDACVWGALLSSCRVHNNLSLGE 565



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 134/575 (23%), Positives = 241/575 (41%), Gaps = 113/575 (19%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQ---HLFDKMPHKDIYSWNAILSAQCKS 67
           HA ILR  LF DT L   L+  Y+   +  + Q    L   +PH  ++S+++++ A  +S
Sbjct: 23  HALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFARS 82

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM----SNEGFVPTHITL 123
                    F  +    ++    L+ + +++    +AL    ++    +  GF+   I  
Sbjct: 83  HHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVA 142

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS- 182
           +S+         +   R+    +     D+++ V +A+++ Y++ G  + A  +F EM  
Sbjct: 143 SSLTHMYLKCDRILDARK----LFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRS 198

Query: 183 ---EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
              EPN V++  M++G        EA+ MFR+M+ +    D  ++S VL        G  
Sbjct: 199 GGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVL-----PAVGCL 253

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK--------------- 284
            DV           V G QVH   IK G  +D  + +++LDMY K               
Sbjct: 254 EDV-----------VVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVE 302

Query: 285 ----------------NGDMDSAEVIFSNLP----ERSVVSWNVMIAGYGQKYQSTKAIE 324
                           NG +D+A  +F+       E +VV+W  +IA   Q  +  +A+E
Sbjct: 303 EMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALE 362

Query: 325 LLQRMKSCGFEPDEVTSINMLVAC-----------------------------------V 349
           L + M++ G EP+ VT  +++ AC                                    
Sbjct: 363 LFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYA 422

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           + G I+  R  FD M + ++ SWNA++  Y+     KE +++F  M   G KPD  T   
Sbjct: 423 KCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTC 482

Query: 410 ILSSCAAMGILESGKQVHAASLK---TASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
           +LS+CA  G+ E G + + +  +       +++Y    L+ + S+  + E A  +   +P
Sbjct: 483 VLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYAC--LVTLLSRVGKLEEAYSIIKEMP 540

Query: 467 -ELDIVCWNSMIAG------LSLNSLDIEAFMFFK 494
            E D   W ++++       LSL  +  E   F +
Sbjct: 541 FEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLE 575



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 158/312 (50%), Gaps = 20/312 (6%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G  +H ++++ GL  D F+ + ++++Y KC        +FD++   +I S NA L+  
Sbjct: 257 VVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGL 316

Query: 65  CKSDDLEFAYKLF----DEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
            ++  ++ A ++F    D+  E NVV+W ++I++  +NG + +AL ++  M   G  P  
Sbjct: 317 SRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNA 376

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           +T+ S+  A   +  + HG+  H   ++ G+  ++YV +AL+ +YAKCG  + A   F++
Sbjct: 377 VTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDK 436

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           MS  N V++ A+M G A   +  E +EMF +M++     D V+ + VL  CA+ G   E 
Sbjct: 437 MSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEG 496

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP- 299
                           +  + ++ + G E  +     L+ + ++ G ++ A  I   +P 
Sbjct: 497 ---------------WRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPF 541

Query: 300 ERSVVSWNVMIA 311
           E     W  +++
Sbjct: 542 EPDACVWGALLS 553


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 180/492 (36%), Positives = 279/492 (56%), Gaps = 37/492 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+Q+H L I  G  +D  +SN LL++Y+K G +D+A  +F  +P ++++S N++I GY  
Sbjct: 71  GKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGY-- 128

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                             RSGD  T R+MFD MP  +V++WNAM
Sbjct: 129 ---------------------------------FRSGDWVTARKMFDEMPERNVATWNAM 155

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           ++   Q E ++E + LF  M   G  PD   L  +L  CA +  L +G+QVH    K   
Sbjct: 156 VAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGF 215

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
             +  V S L  +Y KC      ER+   +P  ++V WN++IAG + N    E    +  
Sbjct: 216 EFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNM 275

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M+     P + +F +V+SSC++L++  QG+Q+HA++ K G    + V S+LI MY +CG 
Sbjct: 276 MKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGC 335

Query: 556 I-YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
           + Y  + F +  +G + V W+ MI  Y  +G G EA+ L+  M    ++ +D+TF+++L 
Sbjct: 336 LEYSLKVFLECENG-DVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLY 394

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           ACSH GL + G++ F+ M   +GV+P L+HYTCM+D LGR G   EAE LI  MP K D 
Sbjct: 395 ACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADV 454

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           + W+ LLS+C++H    +A+R +EE+FRLDP++  PY LL+NI++S  RWDD+  VR+ M
Sbjct: 455 ITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAM 514

Query: 735 SENCIVKDPAYS 746
            +  + K+P  S
Sbjct: 515 RDRKLKKEPGIS 526



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 210/425 (49%), Gaps = 24/425 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH+ I+ +G   D F+ N L+ LYSKC    +A  LF  MP K+I S N +++   +
Sbjct: 71  GKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFR 130

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S D   A K+FDEMPERNV +WN +++ L++    E+ L ++++M+  GF+P    L SV
Sbjct: 131 SGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSV 190

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +    L  +  GR+ HG V K G + N+ V ++L  +Y KCG       +   M   N 
Sbjct: 191 LRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNV 250

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +  +++G A+     E L+ + +M       D ++  SV+  C+      E     Q 
Sbjct: 251 VAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCS------ELATLGQ- 303

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    GQQ+H   IK G    + + +SL+ MY++ G ++ +  +F       VV W
Sbjct: 304 ---------GQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCW 354

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-- 364
           + MIA YG   +  +AI+L  +M+    E ++VT +++L AC   G  + G + FD M  
Sbjct: 355 SSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVE 414

Query: 365 ---PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +  M+    +  + +EA  L R M    VK D  T   +LS+C      E
Sbjct: 415 KYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMP---VKADVITWKTLLSACKIHKKTE 471

Query: 422 SGKQV 426
             +++
Sbjct: 472 MARRI 476



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 168/363 (46%), Gaps = 40/363 (11%)

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R  F + PS S S   A  ++     + K+A   F       +  + +  + +L SC + 
Sbjct: 11  RRHFSTNPS-SGSELTAEFTNLCSKGHLKQAFDRFSSH----IWSEPSLFSHLLQSCISE 65

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKC--------------QRNEL------ 457
             L  GKQ+H+  + +    D ++++ L+ +YSKC              ++N +      
Sbjct: 66  NSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILI 125

Query: 458 -----------AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
                      A ++F  +PE ++  WN+M+AGL     + E    F +M +    P +F
Sbjct: 126 NGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEF 185

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +  +VL  CA L +   GRQVH  + K G+  ++ V S+L  MY KCG +    +    M
Sbjct: 186 ALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAM 245

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             +N V WN +I G AQNGY +E +  Y  M  +G +PD ITFV+++++CS    +  G 
Sbjct: 246 PSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQ 305

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD-DPVIWEVLLSSCR 685
           +I   + +  G   I+   + +I    R G    +  +  E  C++ D V W  ++++  
Sbjct: 306 QIHAEV-IKAGASLIVSVISSLISMYSRCGCLEYSLKVFLE--CENGDVVCWSSMIAAYG 362

Query: 686 LHA 688
            H 
Sbjct: 363 FHG 365



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 143/312 (45%), Gaps = 47/312 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A VAG+ +H ++ + G   +  + + L  +Y KC +    + L   MP +++ +W    
Sbjct: 198 RALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAW---- 253

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                      N LI+   +NG  E+ L  YN M   GF P  I
Sbjct: 254 ---------------------------NTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKI 286

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  SV  + + L  +  G++ H  VIK G    + V ++L+S+Y++CG  ++++ VF E 
Sbjct: 287 TFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLEC 346

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + V +++M++      R VEA+++F  M ++ +  + V+  S+L  C+   CG++  
Sbjct: 347 ENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSH--CGLKEK 404

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                D              +  K G +  L     ++D+  + G ++ AE +  ++P +
Sbjct: 405 GIKFFD-------------LMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVK 451

Query: 302 S-VVSWNVMIAG 312
           + V++W  +++ 
Sbjct: 452 ADVITWKTLLSA 463


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 187/643 (29%), Positives = 339/643 (52%), Gaps = 51/643 (7%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           G+  H  ++K G   +++  N LL+ Y +    + A  +F+EM + N ++F  +  G ++
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
             +  +AL     + ++   ++    +++L +       V  D+                
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLL------VSMDLAHLC----------WT 157

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +H    KLG  AD  +  +L+D Y+  G++D A  +F ++  + +VSW  M+A Y +   
Sbjct: 158 LHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCF 217

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVACV----------------------------- 349
             ++++L  +M+  G++P+  T    L +C+                             
Sbjct: 218 YEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIA 277

Query: 350 ------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                 +SG+I   + +F+ MP   +  W+ M++ Y+QS+  KEA+ LF  M+   V P+
Sbjct: 278 LLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPN 337

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             T A +L +CA+   L+ GKQ+H+  LK   + + +V++ ++ +Y+KC   E + ++F 
Sbjct: 338 NFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFE 397

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            +P+ + V WN++I G         A   F  M +++M PT+ ++++VL + A L++   
Sbjct: 398 ELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEP 457

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           G Q+H+   K  Y  D  V ++LI+MY KCG I  AR  FD M+ ++ V+WN MI GY+ 
Sbjct: 458 GLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSM 517

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
           +G   EA+ L+  M  +  KP+ +TFV +L+ACS++GL+  G   F SM  D+ ++P ++
Sbjct: 518 HGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIE 577

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
           HYTCM+  LGR G F EA  LI E+  +   ++W  LL +C +H  V L +  A+ +  +
Sbjct: 578 HYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEM 637

Query: 704 DPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +P + A + LL+N+Y++ GRWD++  VR+ M +  + K+P  S
Sbjct: 638 EPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLS 680



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 264/522 (50%), Gaps = 48/522 (9%)

Query: 212 MIRKAVSIDSVSLSSVLGVCA---REGC--GVESDVFAQSDNKFSRN----VHGQQVHCL 262
           MI + +  DS  LS +L  C     + C   ++S  +A    +  RN    + G+ +HC 
Sbjct: 1   MISRTIVRDSTKLSQLLHQCRNIHHQQCLSALDSHSYAHMLQQIIRNGADPIAGKHLHCH 60

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            +K G   DL   N LL+ Y ++  +  A  +F  +P+ + +S+  +  GY + +Q  +A
Sbjct: 61  ILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQA 120

Query: 323 IELLQRMKSCGFEPDE---VTSINMLV------------ACVRS---------------- 351
           +  + R+   G E +     T + +LV            ACV                  
Sbjct: 121 LHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDA 180

Query: 352 ----GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
               G++   R +FD +    + SW  M++ Y+++  ++E+++LF +M+  G KP+  T+
Sbjct: 181 YSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTI 240

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           +  L SC  +     GK VH  +LK     D +V   L+ +Y+K      A+R+F  +P+
Sbjct: 241 SGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPK 300

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            D++ W+ MIA  + +    EA   F +MRQ  + P  F+FA+VL +CA   S   G+Q+
Sbjct: 301 TDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQI 360

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H+ + K G  +++FV +A++++Y KCG+I  + + F+ +  +N VTWN +I GY Q G G
Sbjct: 361 HSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDG 420

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN-SMQLDHGVEPILDHYT 646
           + A+ L+  M+   ++P ++T+ ++L A +    ++ G++I + +++  +  + ++    
Sbjct: 421 ERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVA--N 478

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
            +ID   + G  ++A +  D+M  K D V W  ++    +H 
Sbjct: 479 SLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMHG 519



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 261/571 (45%), Gaps = 94/571 (16%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           +AGK LH HIL+ G   D F  N L+  Y + N+   A  LFD+MP  +  S+  +  AQ
Sbjct: 52  IAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISF--VTLAQ 109

Query: 65  CKSDD------LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
             S D      L F  ++F E  E N   +  L+  LV   L     ++           
Sbjct: 110 GYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTL----------- 158

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
                                   H  V K+G   + +V  AL+  Y+  G    A  VF
Sbjct: 159 ------------------------HACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVF 194

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           +++   + V++T M++  A+     E+L++F  M       ++ ++S  L  C     G+
Sbjct: 195 DDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCL----GL 250

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
           E           + NV G+ VH   +K  ++ DL +  +LL++YAK+G++  A+ +F  +
Sbjct: 251 E-----------AFNV-GKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEM 298

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------- 351
           P+  ++ W++MIA Y Q  +S +A++L  RM+     P+  T  ++L AC  S       
Sbjct: 299 PKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGK 358

Query: 352 ----------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                       G+I+   ++F+ +P  +  +WN ++  Y Q  
Sbjct: 359 QIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLG 418

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
           + + A+ LF  M    ++P   T + +L + A++  LE G Q+H+ ++KT  + D  VA+
Sbjct: 419 DGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVAN 478

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            LI +Y+KC R   A   F ++ + D V WN+MI G S++ + +EA   F  M+  +  P
Sbjct: 479 SLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKP 538

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
            + +F  VLS+C+     ++G+     + KD
Sbjct: 539 NKLTFVGVLSACSNAGLLYKGQAHFESMSKD 569



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 203/391 (51%), Gaps = 24/391 (6%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D++   A+L    KS ++  A +LF+EMP+ +++ W+ +I+   ++   ++AL ++ +M 
Sbjct: 271 DLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMR 330

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
               VP + T ASV +A  + + ++ G++ H  V+K GL+ N++V+NA++ +YAKCG  +
Sbjct: 331 QTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIE 390

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +++ +FEE+ + N+VT+  ++ G  +      A+ +F  M+   +    V+ SSVL   A
Sbjct: 391 NSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASA 450

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                +E                G Q+H LTIK  +  D  ++NSL+DMYAK G ++ A 
Sbjct: 451 SLA-ALEP---------------GLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDAR 494

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
           + F  + +R  VSWN MI GY     S +A+ L   M+    +P+++T + +L AC  +G
Sbjct: 495 LTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAG 554

Query: 353 DIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
            +  G+  F+SM       P +  +  M+    +     EA+KL  E+ +   +P     
Sbjct: 555 LLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAY---QPSVMVW 611

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHID 438
             +L +C     ++ G+      L+   H D
Sbjct: 612 RALLGACVIHKKVDLGRVCAQHVLEMEPHDD 642



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 144/295 (48%), Gaps = 17/295 (5%)

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           +GK +H   LK  + +D +  + L+  Y +    + A ++F  +P+ + + + ++  G S
Sbjct: 53  AGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYS 112

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            +    +A  F  ++ +       F F T+L     +  +     +HA + K G+  D F
Sbjct: 113 RDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAF 172

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           VG+ALI+ Y   G++  AR  FD +  K+ V+W  M+  YA+N + +E+++L+  M   G
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG--VEPILDH----YTCMIDCLGRA 655
            KP++ T    L +C       +G+E FN  +  HG  ++   DH       +++   ++
Sbjct: 233 YKPNNFTISGALKSC-------LGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKS 285

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
           G   +A+ L +EMP K D + W ++++    +A    +K A +   R+   +  P
Sbjct: 286 GEIIDAQRLFEEMP-KTDLIPWSLMIAR---YAQSDRSKEALDLFLRMRQTSVVP 336


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 214/688 (31%), Positives = 339/688 (49%), Gaps = 110/688 (15%)

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +S   ++   + A  +FD MP RN VS+N +IS  +RN     A  +++KM +       
Sbjct: 40  ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPH------- 92

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
                                           K+++  N +L+ YA+    + A  +F+ 
Sbjct: 93  --------------------------------KDLFSWNLMLTGYARNRRLRDARMLFDS 120

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M E + V++ AM+SG  ++  V EA ++F  M  K    +S+S + +L    R G   E+
Sbjct: 121 MPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWNGLLAAYVRSGRLEEA 176

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
               +S + +      + + C              N L+  Y K   +  A  +F  +P 
Sbjct: 177 RRLFESKSDW------ELISC--------------NCLMGGYVKRNMLGDARQLFDQIPV 216

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           R ++SWN MI+GY Q    ++A  L +         D  T   M+ A V+ G +   R +
Sbjct: 217 RDLISWNTMISGYAQDGDLSQARRLFEESPV----RDVFTWTAMVYAYVQDGMLDEARRV 272

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FD MP     S+N M++ Y+Q +      +LF EM F    P+  +  I++S        
Sbjct: 273 FDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPF----PNIGSWNIMISG------- 321

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE--RVFHRIPELDIVCWNSMIA 478
                                          CQ  +LA+   +F  +P+ D V W ++IA
Sbjct: 322 ------------------------------YCQNGDLAQARNLFDMMPQRDSVSWAAIIA 351

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G + N L  EA     +M+++     + +F   LS+CA +++   G+QVH Q+ + GY  
Sbjct: 352 GYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEK 411

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
              VG+AL+ MYCKCG I  A   F  +  K+ V+WN M+ GYA++G+G +A+ +++ MI
Sbjct: 412 GCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMI 471

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
            +GVKPD+IT V +L+ACSH+GL D G E F+SM  D+G+ P   HY CMID LGRAG  
Sbjct: 472 TAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCL 531

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
            EA+ LI  MP + D   W  LL + R+H N+ L ++AAE +F+++P NS  Y LL+N+Y
Sbjct: 532 EEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLY 591

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++ GRW D+  +R  M +  + K P YS
Sbjct: 592 AASGRWVDVSKMRLKMRQIGVQKTPGYS 619



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 152/569 (26%), Positives = 271/569 (47%), Gaps = 80/569 (14%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N +I  Y +      A+ LFDKMPHKD++SWN +L+   ++  L  A  LFD MPE++VV
Sbjct: 68  NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVV 127

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SWN ++S  VR+G  ++A  V+++M +                                 
Sbjct: 128 SWNAMLSGYVRSGHVDEARDVFDRMPH--------------------------------- 154

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
                 KN    N LL+ Y + G  + A  +FE  S+   ++   +M G  K + + +A 
Sbjct: 155 ------KNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDAR 208

Query: 207 EMF-RLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           ++F ++ +R     D +S ++++   A++G       +F +S  +               
Sbjct: 209 QLFDQIPVR-----DLISWNTMISGYAQDGDLSQARRLFEESPVR--------------- 248

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
                 D+    +++  Y ++G +D A  +F  +P++  +S+NVMIAGY Q  +     E
Sbjct: 249 ------DVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRE 302

Query: 325 LLQRMKSCGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
           L + M      P+ + S N++++   ++GD+   R +FD MP     SW A+++ Y+Q+ 
Sbjct: 303 LFEEMPF----PN-IGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNG 357

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
            ++EA+ +  EM+  G   +R+T    LS+CA +  LE GKQVH   ++T       V +
Sbjct: 358 LYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGN 417

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            L+G+Y KC   + A  VF  +   DIV WN+M+AG + +    +A   F+ M    + P
Sbjct: 418 ALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKP 477

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQF 562
            + +   VLS+C+    + +G +    + KD G   +    + +I++  + G +  A+  
Sbjct: 478 DEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNL 537

Query: 563 F-DMMHGKNTVTWNEM-----IHGYAQNG 585
             +M    +  TW  +     IHG  + G
Sbjct: 538 IRNMPFEPDAATWGALLGASRIHGNMELG 566



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 205/416 (49%), Gaps = 32/416 (7%)

Query: 26  CNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNV 85
           CN L+  Y K N    A+ LFD++P +D+ SWN ++S   +  DL  A +LF+E P R+V
Sbjct: 191 CNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDV 250

Query: 86  VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGL 145
            +W  ++ A V++G+ ++A  V+++M  +  +  ++ +A    A    +D+  GR    L
Sbjct: 251 FTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGY--AQYKRMDM--GRE---L 303

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
             ++    NI   N ++S Y + G    A  +F+ M + + V++ A+++G A+     EA
Sbjct: 304 FEEMPF-PNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEA 362

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           + M   M R   S++  +    L  CA        D+ A           G+QVH   ++
Sbjct: 363 MNMLVEMKRDGESLNRSTFCCALSACA--------DIAALE--------LGKQVHGQVVR 406

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
            G+E    + N+L+ MY K G +D A  +F  +  + +VSWN M+AGY +     +A+ +
Sbjct: 407 TGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTV 466

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYS 380
            + M + G +PDE+T + +L AC  +G    G E F SM      +P+   +  M+    
Sbjct: 467 FESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLG 526

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           ++   +EA  L R M F   +PD  T   +L +    G +E G+Q      K   H
Sbjct: 527 RAGCLEEAQNLIRNMPF---EPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPH 579



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 150/349 (42%), Gaps = 26/349 (7%)

Query: 335 EPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           +P  V     +   +R+G       +FD+MP  +  S+NAM+S Y ++     A  LF +
Sbjct: 30  DPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDK 89

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M  +    D  +  ++L+  A    L   + +      +    D    + ++  Y +   
Sbjct: 90  MPHK----DLFSWNLMLTGYARNRRLRDARML----FDSMPEKDVVSWNAMLSGYVRSGH 141

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A  VF R+P  + + WN ++A    +    EA   F+     E+     S   ++  
Sbjct: 142 VDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWEL----ISCNCLMGG 197

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
             K +     RQ+  QI     V D+   + +I  Y + GD+  AR+ F+    ++  TW
Sbjct: 198 YVKRNMLGDARQLFDQIP----VRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTW 253

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
             M++ Y Q+G  DEA R++ +M     +  ++++  ++   +    +D+G E+F  M  
Sbjct: 254 TAMVYAYVQDGMLDEARRVFDEM----PQKREMSYNVMIAGYAQYKRMDMGRELFEEMPF 309

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
                P +  +  MI    + G   +A  L D MP + D V W  +++ 
Sbjct: 310 -----PNIGSWNIMISGYCQNGDLAQARNLFDMMP-QRDSVSWAAIIAG 352


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 195/642 (30%), Positives = 342/642 (53%), Gaps = 58/642 (9%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H L++  G  ++I+++  L++LYA  G    +   F+++ + +  T+ +M+S        
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHF 198

Query: 203 VEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
            EA+  F +L++   +  D  +   VL     + CG   D              G+++HC
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVL-----KACGTLVD--------------GRRIHC 239

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
              KLGF+ ++ ++ SL+ MY++ G    A  +F ++P R + SWN MI+G  Q   + +
Sbjct: 240 WAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 299

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------------------ 357
           A+++L  M+  G + + VT +++L  C + GDI T                         
Sbjct: 300 ALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALIN 359

Query: 358 -----------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
                      R+ F  M    V SWN+++++Y Q+++   A   F +MQ  G +PD  T
Sbjct: 360 MYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLT 419

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYV-ASGLIGIYSKCQRNELAERVFHRI 465
           L  + S  A     ++ + VH   ++    +++ V  + ++ +Y+K    + A +VF  I
Sbjct: 420 LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII 479

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQFSFATVLSSCAKLSSSFQG 524
              D++ WN++I G + N L  EA   +K M +  E+ P Q ++ ++L + A + +  QG
Sbjct: 480 LVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 539

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
            ++H ++ K     D+FV + LI++Y KCG +  A   F  +  +++VTWN +I  +  +
Sbjct: 540 MRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH 599

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G+ ++ ++L+ +M+  GVKPD +TFV++L+ACSHSG V+ G   F  MQ ++G++P L H
Sbjct: 600 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKH 658

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y CM+D LGRAG+   A   I +MP + D  IW  LL +CR+H N+ L K A++ LF +D
Sbjct: 659 YGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 718

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            KN   Y LL+NIY+++G+W+ +  VR L  E  + K P +S
Sbjct: 719 SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 760



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 165/656 (25%), Positives = 295/656 (44%), Gaps = 122/656 (18%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LHA ++  G     F+  RL+ LY+                                 
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLG------------------------------ 165

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALS-VYNKMSNEGFVPTHITLASV 126
            D+  +   FD++P+++V +WN++ISA V NG   +A+   Y  +      P   T   V
Sbjct: 166 -DVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPV 224

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L+D   GRR H    K+G   N++VA +L+ +Y++ G+T  A  +F++M   + 
Sbjct: 225 LKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDM 281

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++ AM+SGL +     +AL++   M  + + ++ V++ S+L VC + G     D+    
Sbjct: 282 GSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLG-----DIST-- 334

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                       +H   IK G E DL +SN+L++MYAK G+++ A   F  +    VVSW
Sbjct: 335 ---------AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSW 385

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
           N +IA Y Q      A     +M+  GF+PD +T +++     +S D K  R        
Sbjct: 386 NSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMR 445

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                       ++F+ +    V SWN +++ Y+Q+    EAI+
Sbjct: 446 RGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIE 505

Query: 391 LFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +++ M + + + P++ T   IL + A +G L+ G ++H   +KT  H+D +VA+ LI +Y
Sbjct: 506 VYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVY 565

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            KC R   A  +F+++P+   V WN++I+   ++    +    F +M    + P   +F 
Sbjct: 566 GKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFV 625

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           ++LS+C+      +G+     +++ G      +  +L    C   D+ G   + +M +G 
Sbjct: 626 SLLSACSHSGFVEEGKWCFRLMQEYG------IKPSLKHYGCMV-DLLGRAGYLEMAYG- 677

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
                                    KDM    ++PD   + A+L AC   G +++G
Sbjct: 678 -----------------------FIKDM---PLQPDASIWGALLGACRIHGNIELG 707



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 227/471 (48%), Gaps = 47/471 (9%)

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +H L +  G    + +S  L+++YA  GD+  +   F  +P++ V +WN MI+ Y     
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197

Query: 319 STKAIELLQR-----------------MKSC----------------GFEPDEVTSINML 345
             +AI    +                 +K+C                GF+ +   + +++
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLI 257

Query: 346 VACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
               R G     R +FD MP   + SWNAM+S   Q+ N  +A+ +  EM+  G+K +  
Sbjct: 258 HMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFV 317

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T+  IL  C  +G + +   +H   +K     D +V++ LI +Y+K    E A + F ++
Sbjct: 318 TVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
              D+V WNS+IA    N   + A  FF +M+ N   P   +  ++ S  A+       R
Sbjct: 378 FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSR 437

Query: 526 QVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
            VH  I + G++  D+ +G+A+++MY K G +  A + F+++  K+ ++WN +I GYAQN
Sbjct: 438 SVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQN 497

Query: 585 GYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVDVGVEIF-----NSMQLDHGV 638
           G   EA+ +YK M     + P+  T+V+IL A +H G +  G+ I       ++ LD  V
Sbjct: 498 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFV 557

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
                  TC+ID  G+ G   +A  L  ++P ++  V W  ++S   +H +
Sbjct: 558 A------TCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHGH 601



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 213/457 (46%), Gaps = 84/457 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +H    + G   + F+   LI +YS+   T  A+ LFD MP +D+ SWNA     
Sbjct: 232 VDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNA----- 286

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +IS L++NG   +AL V ++M  EG     +T+ 
Sbjct: 287 --------------------------MISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVV 320

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+      L D+      H  VIK GL+ +++V+NAL+++YAK G  + A   F++M   
Sbjct: 321 SILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFIT 380

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ ++++   + D  V A   F  M       D ++L S+  + A+           
Sbjct: 381 DVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS---------- 430

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
             D K SR+VHG       ++ G+   D+ + N+++DMYAK G +DSA  +F  +  + V
Sbjct: 431 -RDCKNSRSVHG-----FIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDV 484

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGRE--- 359
           +SWN +I GY Q   +++AIE+ + M+ C    P++ T +++L A    G ++ G     
Sbjct: 485 ISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHG 544

Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                           +F  +P  S  +WNA++S +    + ++
Sbjct: 545 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEK 604

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
            +KLF EM   GVKPD  T   +LS+C+  G +E GK
Sbjct: 605 TLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 198/422 (46%), Gaps = 56/422 (13%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           L+H +++++GL  D F+ N LI +Y+K  N                              
Sbjct: 337 LIHLYVIKHGLEFDLFVSNALINMYAKFGN------------------------------ 366

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
            LE A K F +M   +VVSWN++I+A  +N     A   + KM   GF P  +TL S+  
Sbjct: 367 -LEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLAS 425

Query: 129 ASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
                 D ++ R  HG +++ G L +++ + NA++ +YAK G    A  VFE +   + +
Sbjct: 426 IVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVI 485

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           ++  +++G A+     EA+E++++M   K +  +  +  S+L   A  G   +       
Sbjct: 486 SWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQ------- 538

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G ++H   IK     D+ ++  L+D+Y K G +  A  +F  +P+ S V+W
Sbjct: 539 ---------GMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTW 589

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N +I+ +G    + K ++L   M   G +PD VT +++L AC  SG ++ G+  F  M  
Sbjct: 590 NAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE 649

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
               PS+  +  M+    ++   + A    ++M    ++PD +    +L +C   G +E 
Sbjct: 650 YGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMP---LQPDASIWGALLGACRIHGNIEL 706

Query: 423 GK 424
           GK
Sbjct: 707 GK 708



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 40/224 (17%)

Query: 3   AHVA----GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           AHV     G  +H  +++  L  D F+   LI++Y KC     A  LF ++P +   +WN
Sbjct: 531 AHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWN 590

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
           AI+S        E   KLF E                               M +EG  P
Sbjct: 591 AIISCHGIHGHAEKTLKLFGE-------------------------------MLDEGVKP 619

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
            H+T  S+  A +    VE G+ C  L+ + G+  ++     ++ L  + G+ + A    
Sbjct: 620 DHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFI 679

Query: 179 EEMS-EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDS 221
           ++M  +P+   + A++       R+   +E+ +    +   +DS
Sbjct: 680 KDMPLQPDASIWGALLGAC----RIHGNIELGKFASDRLFEVDS 719


>gi|356565618|ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 619

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 205/617 (33%), Positives = 326/617 (52%), Gaps = 25/617 (4%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           +   ++ H  ++  G   N +    L+ +YA     + AV +  ++S PN   FT+++S 
Sbjct: 18  LNQAKQLHHRILLTGSHHNHFFVTKLIQIYADSNDLRSAVTLLHQISHPNVFAFTSILSF 77

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
            ++     + ++ +  + R  V  D      VL  CA                + SR   
Sbjct: 78  HSRHGLGHQCIQTYAELRRNGVVPDGYVFPKVLKACA----------------QLSRFGS 121

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ VH   +  G E++L + NS+LDMY+K GD+ SA  +F  + ER V SWN M++GY  
Sbjct: 122 GRGVHKDVVVFGEESNLQVRNSVLDMYSKCGDVGSARQVFDEMSERDVFSWNSMMSGYVW 181

Query: 316 KYQSTKAIELLQRMK--SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
                KA+E+L  MK   CG EPD VT   ++ A  R G       +F  +  P+V SW 
Sbjct: 182 NGLPHKAVEVLGVMKKDGCGCEPDVVTWNTVMDAYCRMGQCCEASRVFGEIEDPNVISWT 241

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
            ++S Y+    H  ++ +FR+M   G V PD   L+ +L SC  +G L SGK++H   LK
Sbjct: 242 ILISGYAGVGRHDVSLGIFRQMVNVGMVSPDVDALSGVLVSCRHLGALASGKEIHGYGLK 301

Query: 433 TASHIDNYVASG--LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
                  Y ++G  L+ +Y+   R + A+ VF R+ + D+V WN+MI GL    L   A 
Sbjct: 302 IMCGDVFYRSAGAALLMLYAGWGRLDCADNVFWRMDKSDVVTWNAMIFGLVDVGLVDLAL 361

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             F++M+   +     + +++L  C        G+++HA + K  +   I V +ALI MY
Sbjct: 362 DCFREMQGRGVGIDGRTISSILPVCDLRC----GKEIHAYVRKCNFSGVIPVYNALIHMY 417

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
              G I  A   F  M  ++ V+WN +I G+  +G G  A+ L ++M  SGV+PD +TF 
Sbjct: 418 SIRGCIAYAYSVFSTMVARDLVSWNTIIGGFGTHGLGQTALELLQEMSGSGVRPDLVTFS 477

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
             L+ACSHSGLV+ G+E+F  M  D  + P  +H++C++D L RAG   +A   I++MP 
Sbjct: 478 CALSACSHSGLVNEGIELFYRMTKDFSMTPAREHFSCVVDMLARAGRLEDAFHFINQMPQ 537

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
           + +  +W  LL++C+ H N+ + K AAE+L  L+P  +  Y  L+NIYS  GRWDD   V
Sbjct: 538 EPNNHVWGALLAACQEHQNISVGKLAAEKLISLEPHEAGHYVTLSNIYSRAGRWDDAARV 597

Query: 731 RELMSENCIVKDPAYSL 747
           R++M  + ++K   +SL
Sbjct: 598 RKMMDGHGLLKPSGHSL 614



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 220/501 (43%), Gaps = 69/501 (13%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKM---------------- 49
           +G+ +H  ++  G   +  + N ++++YSKC +  SA+ +FD+M                
Sbjct: 121 SGRGVHKDVVVFGEESNLQVRNSVLDMYSKCGDVGSARQVFDEMSERDVFSWNSMMSGYV 180

Query: 50  ----PHK-----------------DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSW 88
               PHK                 D+ +WN ++ A C+      A ++F E+ + NV+SW
Sbjct: 181 WNGLPHKAVEVLGVMKKDGCGCEPDVVTWNTVMDAYCRMGQCCEASRVFGEIEDPNVISW 240

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLASVFKASTALLDVEHGRRCHGLVI 147
             LIS     G  + +L ++ +M N G V P    L+ V  +   L  +  G+  HG  +
Sbjct: 241 TILISGYAGVGRHDVSLGIFRQMVNVGMVSPDVDALSGVLVSCRHLGALASGKEIHGYGL 300

Query: 148 KIGLDKNIY--VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
           KI      Y     ALL LYA  G    A  VF  M + + VT+ AM+ GL     V  A
Sbjct: 301 KIMCGDVFYRSAGAALLMLYAGWGRLDCADNVFWRMDKSDVVTWNAMIFGLVDVGLVDLA 360

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           L+ FR M  + V ID  ++SS+L VC    C                   G+++H    K
Sbjct: 361 LDCFREMQGRGVGIDGRTISSILPVCDLR-C-------------------GKEIHAYVRK 400

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
             F   + + N+L+ MY+  G +  A  +FS +  R +VSWN +I G+G       A+EL
Sbjct: 401 CNFSGVIPVYNALIHMYSIRGCIAYAYSVFSTMVARDLVSWNTIIGGFGTHGLGQTALEL 460

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYS 380
           LQ M   G  PD VT    L AC  SG +  G E+F  M      +P+   ++ ++   +
Sbjct: 461 LQEMSGSGVRPDLVTFSCALSACSHSGLVNEGIELFYRMTKDFSMTPAREHFSCVVDMLA 520

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           ++   ++A     +M     +P+      +L++C     +  GK      +    H   +
Sbjct: 521 RAGRLEDAFHFINQMP---QEPNNHVWGALLAACQEHQNISVGKLAAEKLISLEPHEAGH 577

Query: 441 VASGLIGIYSKCQRNELAERV 461
             + L  IYS+  R + A RV
Sbjct: 578 YVT-LSNIYSRAGRWDDAARV 597



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 142/593 (23%), Positives = 245/593 (41%), Gaps = 101/593 (17%)

Query: 32  LYSKCNNTHSAQHLFDKM----PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVS 87
           L   C   + A+ L  ++     H + +    ++     S+DL  A  L  ++   NV +
Sbjct: 11  LLQACKTLNQAKQLHHRILLTGSHHNHFFVTKLIQIYADSNDLRSAVTLLHQISHPNVFA 70

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           + +++S   R+GL  + +  Y ++   G VP       V KA   L     GR  H  V+
Sbjct: 71  FTSILSFHSRHGLGHQCIQTYAELRRNGVVPDGYVFPKVLKACAQLSRFGSGRGVHKDVV 130

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
             G + N+ V N++L +Y+KCG    A  VF+EMSE +  ++ +MMSG        +A+E
Sbjct: 131 VFGEESNLQVRNSVLDMYSKCGDVGSARQVFDEMSERDVFSWNSMMSGYVWNGLPHKAVE 190

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
                              VLGV  ++GCG E DV                         
Sbjct: 191 -------------------VLGVMKKDGCGCEPDVVTW---------------------- 209

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
                   N+++D Y + G    A  +F  + + +V+SW ++I+GY    +   ++ + +
Sbjct: 210 --------NTVMDAYCRMGQCCEASRVFGEIEDPNVISWTILISGYAGVGRHDVSLGIFR 261

Query: 328 RMKSCGFEPDEVTSIN-MLVACVRSGDIKTGREM-------------------------- 360
           +M + G    +V +++ +LV+C   G + +G+E+                          
Sbjct: 262 QMVNVGMVSPDVDALSGVLVSCRHLGALASGKEIHGYGLKIMCGDVFYRSAGAALLMLYA 321

Query: 361 -----------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
                      F  M    V +WNAM+           A+  FREMQ RGV  D  T++ 
Sbjct: 322 GWGRLDCADNVFWRMDKSDVVTWNAMIFGLVDVGLVDLALDCFREMQGRGVGIDGRTISS 381

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           IL  C     L  GK++HA   K        V + LI +YS       A  VF  +   D
Sbjct: 382 ILPVCD----LRCGKEIHAYVRKCNFSGVIPVYNALIHMYSIRGCIAYAYSVFSTMVARD 437

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V WN++I G   + L   A    ++M  + + P   +F+  LS+C+      +G ++  
Sbjct: 438 LVSWNTIIGGFGTHGLGQTALELLQEMSGSGVRPDLVTFSCALSACSHSGLVNEGIELFY 497

Query: 530 QIEKDGYVN---DIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMI 578
           ++ KD  +    + F  S +++M  + G +  A  F + M    N   W  ++
Sbjct: 498 RMTKDFSMTPAREHF--SCVVDMLARAGRLEDAFHFINQMPQEPNNHVWGALL 548


>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
          Length = 788

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 204/626 (32%), Positives = 323/626 (51%), Gaps = 82/626 (13%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           +K++     ++    K G  + AV ++E     +   FTAM+SG  + +   +A  +FR 
Sbjct: 177 EKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFPVFRK 236

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M+  +V  + V+L  V+  C   G   E D+        +  V G  V C      FE  
Sbjct: 237 MLTCSVRPNVVTLICVIKACVGAG---EFDL--------AMGVVGLAVKCNL----FEKS 281

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + + NSL+ +Y + GD  +A  +F ++  R VVSW  ++  Y                  
Sbjct: 282 IEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADL--------------- 326

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                               GD+   R + D+MP+ +  SW  +++ + Q  +  EA+KL
Sbjct: 327 --------------------GDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKL 366

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           + +M   G +P+ +  + +LS+CA +  L  G ++HA +LK  S  + +V+S LI +Y K
Sbjct: 367 YSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCK 426

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ------------- 498
           C++   A+RVF+ +PE + VCWNS+I+G S N   +EA   F +M               
Sbjct: 427 CKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGY 486

Query: 499 ----------NEMY--------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
                     N  Y        P + + ++VL +CA L S   GR VHA+I K G  ++I
Sbjct: 487 AENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNI 546

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           F+G+AL +MY K GD+  +R+ F  M  KN +TW  M+ G A+NG+ +E++ L++DMI +
Sbjct: 547 FMGTALSDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIEN 606

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G+ P++ TF+AIL ACSH GLV+  +  F +MQ  HG+ P   HYTCM+D L RAG   E
Sbjct: 607 GIAPNEHTFLAILFACSHCGLVEQAIHYFETMQA-HGIPPKSKHYTCMVDVLARAGCLPE 665

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           AE L+ ++  + D   W  LLS+C  + N  + +RAA++L  L+  N+A Y LL+N+Y+S
Sbjct: 666 AEELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYAS 725

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
            G+W D    R LM    + KD   S
Sbjct: 726 CGKWKDAAETRILMQGASLKKDAGCS 751



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 215/474 (45%), Gaps = 81/474 (17%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N LI LY +  +  +A  +FD M  +D+ SW A+L       DL  A ++ D MP RN V
Sbjct: 286 NSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGARRVLDAMPARNEV 345

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  LI+   + G   +AL +Y++M  +G  P     +SV  A   L D+  G R H   
Sbjct: 346 SWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANA 405

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K+G   N++V+++L+ +Y KC    +A  VF  + E N V + +++SG +   ++VEA 
Sbjct: 406 LKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAE 465

Query: 207 EMFRLM-IRKAVSIDS------------------------------VSLSSVLGVCAREG 235
            +F  M  R +VS ++                              ++LSSVL  CA   
Sbjct: 466 GLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANL- 524

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
           C +E                G+ VH   +KLG E ++ +  +L DMYAK+GD+DS+  +F
Sbjct: 525 CSLE---------------MGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVF 569

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
             +PE++ ++W  M+ G  +   + ++I L + M   G  P+E T + +L AC   G + 
Sbjct: 570 YQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLV- 628

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
                                         ++AI  F  MQ  G+ P       ++   A
Sbjct: 629 ------------------------------EQAIHYFETMQAHGIPPKSKHYTCMVDVLA 658

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
             G L   +++    +K +S +D    S L+   S  +  E+ ER   ++ EL+
Sbjct: 659 RAGCLPEAEELL---MKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELE 709



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 145/611 (23%), Positives = 244/611 (39%), Gaps = 161/611 (26%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYS----------------------------------K 35
           LHAH  R+GL  D  + + L+  Y+                                  K
Sbjct: 102 LHAHAFRSGLTADRSVASNLLTAYAAFTRAADRDQAFRDCVAADAASSFTYDFMVSEHVK 161

Query: 36  CNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISAL 95
             +  SA+ LF  MP K + S+  ++ A  K   +  A +L++  P  +V  +  +IS  
Sbjct: 162 AGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGF 221

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL-DKN 154
           VRN L + A  V+ KM      P  +TL  V KA     + +      GL +K  L +K+
Sbjct: 222 VRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKS 281

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM------MSGLAKTDRVV----- 203
           I V N+L++LY + G    A  VF++M   + V++TA+      +  L    RV+     
Sbjct: 282 IEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGARRVLDAMPA 341

Query: 204 --------------------EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
                               EAL+++  M+      +    SSVL  CA        D+ 
Sbjct: 342 RNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACA-----TLQDLR 396

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK------------------- 284
                       G ++H   +K+G   +L +S+SL+DMY K                   
Sbjct: 397 G-----------GTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNT 445

Query: 285 ------------NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
                       NG M  AE +F+ +P R+ VSWN MI+GY +  +   A+     M + 
Sbjct: 446 VCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLAS 505

Query: 333 GFEPDEVTSINMLVAC-----------------------------------VRSGDIKTG 357
           G  P E+T  ++L+AC                                    +SGD+ + 
Sbjct: 506 GHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSS 565

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R +F  MP  +  +W AM+   +++   +E+I LF +M   G+ P+  T   IL +C+  
Sbjct: 566 RRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHC 625

Query: 418 GILESG------KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI-PELDI 470
           G++E         Q H    K+  +      + ++ + ++      AE +  ++  ELD 
Sbjct: 626 GLVEQAIHYFETMQAHGIPPKSKHY------TCMVDVLARAGCLPEAEELLMKVSSELDT 679

Query: 471 VCWNSMIAGLS 481
             W+S+++  S
Sbjct: 680 SSWSSLLSACS 690



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 191/399 (47%), Gaps = 33/399 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA+ L+ G   + F+ + LI++Y KC     AQ +F+ +P K+   WN+++S    
Sbjct: 398 GTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSW 457

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +  +  A  LF++MP RN VSWN +IS    N     AL+ +  M   G +P  ITL+SV
Sbjct: 458 NGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSV 517

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L  +E GR  H  ++K+G++ NI++  AL  +YAK G    +  VF +M E N 
Sbjct: 518 LLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEKNN 577

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T+TAM+ GLA+     E++ +F  MI   ++ +  +  ++L  C+   CG    +  Q+
Sbjct: 578 ITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSH--CG----LVEQA 631

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL-PERSVVS 305
            + F       Q H      G          ++D+ A+ G +  AE +   +  E    S
Sbjct: 632 IHYF----ETMQAH------GIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSS 681

Query: 306 WNVMIAG---YGQK---YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           W+ +++    Y  K    ++ K +  L++  + G+    V   NM  +C +  D    R 
Sbjct: 682 WSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGY----VLLSNMYASCGKWKDAAETRI 737

Query: 360 MFD--SMPSPSVSSWNAMLSSY----SQSENHKEAIKLF 392
           +    S+   +  SW  +   Y    S  E H  +++++
Sbjct: 738 LMQGASLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIY 776



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 202/463 (43%), Gaps = 100/463 (21%)

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           + K GD+ SA  +F  +PE+SVVS+  M+                               
Sbjct: 159 HVKAGDIASARRLFYGMPEKSVVSYTTMVD------------------------------ 188

Query: 342 INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                A ++ G ++   E+++  P  SV+ + AM+S + ++E HK+A  +FR+M    V+
Sbjct: 189 -----ALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFPVFRKMLTCSVR 243

Query: 402 PDRTTLAIILSSCA-------AMGIL---------ESGKQVHAASLKTASHIDNYVA--- 442
           P+  TL  ++ +C        AMG++         E   +VH + +     + +  A   
Sbjct: 244 PNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHR 303

Query: 443 -------------SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
                        + L+ +Y+       A RV   +P  + V W ++IA         EA
Sbjct: 304 VFDDMEVRDVVSWTALLDVYADLGDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEA 363

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
              + QM  +   P    F++VLS+CA L     G ++HA   K G   ++FV S+LI+M
Sbjct: 364 LKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDM 423

Query: 550 YCKC-------------------------------GDIYGARQFFDMMHGKNTVTWNEMI 578
           YCKC                               G +  A   F+ M  +N+V+WN MI
Sbjct: 424 YCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMI 483

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GYA+N    +A+  +  M+ASG  P +IT  ++L AC++   +++G  + ++  +  G+
Sbjct: 484 SGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMG-RMVHAEIVKLGI 542

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           E  +   T + D   ++G    +  +  +MP K++ + W  ++
Sbjct: 543 EDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEKNN-ITWTAMV 584


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 223/778 (28%), Positives = 372/778 (47%), Gaps = 90/778 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H+ I++ GL  D +L N L+ LY+K    H A+H                      
Sbjct: 33  GICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARH---------------------- 70

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    LFDEMP R+VVSW  ++S+  +      AL +++ M   G  P   TL+S 
Sbjct: 71  ---------LFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSA 121

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            ++  AL + E G + H   +K+GL+ N +V  +L+  Y KCG    +V  ++ +S   +
Sbjct: 122 LRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCC--SVEAWKLLSLVKD 179

Query: 187 ----VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
               V++T M+S L +  +  EA E++  MI   V  +  +   +LG  +          
Sbjct: 180 GGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVS---------- 229

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                  F    +G+ +H   I  G E +L L  +++DMY+K   M  A  + +  PE  
Sbjct: 230 ------SFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYD 283

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--- 359
           V  W  +I+G+ Q  Q  +AI + + M+  G  P+  T  ++L A      +  G +   
Sbjct: 284 VYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHS 343

Query: 360 ---------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                            +F  + SP+V  W ++++ +++ +  +
Sbjct: 344 RVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAE-KRLE 402

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           ++ +LF EMQ  GV+P+  T++ IL +C+    L     +H   +KT   ID  VA+ L+
Sbjct: 403 DSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALV 462

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
             Y+     + A  V   +   D + +  + A L+       A      M  + +   +F
Sbjct: 463 DTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEF 522

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           S A+ LS+ A L +   G+Q+H    K G+     V ++L+ +Y KCG I+ A + F  +
Sbjct: 523 SLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDI 582

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
              +  +WN +I G++ NG    A+  + DM  +GVKPD IT +++++ACSH GL+++G+
Sbjct: 583 SEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGL 642

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           E F+SMQ ++ + P LDHY C++D LGR G   EA  +I++M  K D +I + LL++C L
Sbjct: 643 EYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNL 702

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           H NV L +  A     LDP + A Y LLAN+Y + G  D     R LM E  + + P 
Sbjct: 703 HGNVALGEDMARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPG 760



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 8/320 (2%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +LS C +   L+ G  +H+  +K     D Y+ + L+ +Y+K      A  +F  +P  D
Sbjct: 21  VLSFCNSNS-LKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRD 79

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W ++++  +      +A   F  M  +  YP +F+ ++ L SC  L    +G Q+H 
Sbjct: 80  VVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHC 139

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCG--DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
              K G   + FVG++L+E Y KCG   +   +    +  G + V+W  M+    +NG  
Sbjct: 140 SAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKW 199

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
            EA  +Y  MI SGV P++ TFV +L A S    +  G ++ ++  +  G E  L   T 
Sbjct: 200 GEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYG-KLLHAHLIMFGAELNLVLKTA 258

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE--ELFRLDP 705
           ++D   +     +A  + +  P + D  +W  L+S    +  VR A       EL  L P
Sbjct: 259 VVDMYSKCRRMVDAIKVSNLTP-EYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLP 317

Query: 706 KNSAPYSLLANIYSSLGRWD 725
            N+  YS L N  SS+   D
Sbjct: 318 -NNFTYSSLLNASSSILSLD 336


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 203/669 (30%), Positives = 337/669 (50%), Gaps = 60/669 (8%)

Query: 121 ITLASVFKASTALLDVEH------GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           +TL S     TALL   H      G+  H  +IK      +Y+AN+L++LYAKC   + A
Sbjct: 1   MTLPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREA 59

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAK--TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
             VFE +   + V++  +++G ++         +E+F+ M  +  + ++ + + V     
Sbjct: 60  KFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVF---- 115

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                        + +       G+  H + IK+    D+ + +SL++MY K G    A 
Sbjct: 116 ------------TAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEAR 163

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----- 347
            +F  +PER+ VSW  MI+GY  +  + +A+ L + M+      +E    ++L A     
Sbjct: 164 KVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPE 223

Query: 348 ---------CV---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                    C+                     + G +    + F++    +  +W+AM++
Sbjct: 224 LVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMIT 283

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y+QS +  +A+KLF  M   G++P   T   ++++C+ +G    GKQVH   LK     
Sbjct: 284 GYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFES 343

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
             YV + L+ +Y+KC     A + F  + E DIV W SMI G   N  + +A   + +M 
Sbjct: 344 QIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRME 403

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
              + P + + A+VL +C+ L++  QG+Q+HA+  K G+  ++ +GSAL  MY KCG + 
Sbjct: 404 MEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLK 463

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
                F  M  ++ ++WN MI G +QNG G EA+ L+++M   G KPD +TFV IL+ACS
Sbjct: 464 DGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACS 523

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           H GLV+ G   F  M  + G++P ++HY CM+D L RAG   EA    +         +W
Sbjct: 524 HMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLW 583

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
            ++L +CR + N  L   A E+L  L  + S+ Y LL++IYS+LGRW+D+  VR +M   
Sbjct: 584 RIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLR 643

Query: 738 CIVKDPAYS 746
            + K+P  S
Sbjct: 644 GVSKEPGCS 652



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 264/549 (48%), Gaps = 85/549 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA I+++      ++ N L+ LY+KC     A+ +F+++ +KD             
Sbjct: 25  GKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKD------------- 70

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKA--LSVYNKMSNEGFVPTHITLA 124
                             VVSWN +I+   ++G    +  + ++ +M  E   P   T A
Sbjct: 71  ------------------VVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFA 112

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            VF A++ L+D   GR  H + IK+   ++++V ++L+++Y K G T  A  VF+ M E 
Sbjct: 113 GVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPER 172

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++  M+SG A      EAL +FRLM R+    +    +SVL               A
Sbjct: 173 NSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLS--------------A 218

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            +  +   N  G+Q+HC+ +K G  + + + N+L+ MYAK G +D A   F    +++ +
Sbjct: 219 LTLPELVNN--GKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSI 276

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           +W+ MI GY Q   S KA++L   M   G  P E T + ++ AC                
Sbjct: 277 TWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYL 336

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               +   I   R+ FD +  P +  W +M+  Y Q+  +++A+
Sbjct: 337 LKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDAL 396

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            L+  M+  G+ P+  T+A +L +C+++  LE GKQ+HA ++K    ++  + S L  +Y
Sbjct: 397 SLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMY 456

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC   +    VF R+P  D++ WN+MI+GLS N    EA   F++M+     P   +F 
Sbjct: 457 AKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFV 516

Query: 510 TVLSSCAKL 518
            +LS+C+ +
Sbjct: 517 NILSACSHM 525



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/407 (32%), Positives = 201/407 (49%), Gaps = 51/407 (12%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D++  +++++  CK+     A K+FD MPERN VSW  +IS      L  +AL ++  M
Sbjct: 141 RDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLM 200

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
             E          SV  A T    V +G++ H + +K GL   + V NAL+++YAKCG  
Sbjct: 201 RREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSL 260

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A+  FE  S+ N +T++AM++G A++    +AL++F  M    +     +   V+  C
Sbjct: 261 DDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINAC 320

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           +  G   E                G+QVH   +KLGFE+ +++  +L+DMYAK   +  A
Sbjct: 321 SDLGAAWE----------------GKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDA 364

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--- 348
              F  L E  +V W  MI GY Q  ++  A+ L  RM+  G  P+E+T  ++L AC   
Sbjct: 365 RKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSL 424

Query: 349 --------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                            + G +K G  +F  MP+  V SWNAM+
Sbjct: 425 AALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMI 484

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           S  SQ+   KEA++LF EMQ  G KPD  T   ILS+C+ MG++E G
Sbjct: 485 SGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERG 531



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 234/529 (44%), Gaps = 76/529 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   ++NGL     + N L+ +Y+KC +                            
Sbjct: 228 GKQIHCIAVKNGLLSIVSVGNALVTMYAKCGS---------------------------- 259

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A + F+   ++N ++W+ +I+   ++G  +KAL +++ M   G  P+  T   V
Sbjct: 260 ---LDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGV 316

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + L     G++ H  ++K+G +  IYV  AL+ +YAKC     A   F+ + EP+ 
Sbjct: 317 INACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDI 376

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +T+M+ G  +     +AL ++  M  + +  + ++++SVL  C+              
Sbjct: 377 VLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACS-------------- 422

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+Q+H  T+K GF  ++ + ++L  MYAK G +    ++F  +P R V+SW
Sbjct: 423 --SLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISW 480

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG----REMFD 362
           N MI+G  Q     +A+EL + M+  G +PD VT +N+L AC   G ++ G    R MFD
Sbjct: 481 NAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFD 540

Query: 363 SMP-SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P V  +  M+   S++   KEAI+         +        IIL +C      E
Sbjct: 541 EFGMDPRVEHYACMVDILSRAGKLKEAIEFTESAT---IDHGMCLWRIILGACRNYRNYE 597

Query: 422 SGKQVHAASLKTASHIDN-YVASGLIGIYSKCQRNELAERVFHRIPELDIV------CWN 474
            G       ++  S   + YV   L  IYS   R E  ERV  R+ +L  V       W 
Sbjct: 598 LGAYAGEKLMELGSQESSAYVL--LSSIYSALGRWEDVERV-RRMMKLRGVSKEPGCSWI 654

Query: 475 SMIAGL-----------SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
            + +G+            +  + +E     KQM+     P   SF+  L
Sbjct: 655 ELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPATDSFSAAL 703


>gi|225457865|ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Vitis vinifera]
          Length = 711

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 207/672 (30%), Positives = 336/672 (50%), Gaps = 53/672 (7%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
           HL    P   I+  N  +    K   L+ A +LF+EMP+R+  SWN +I+A  + G  EK
Sbjct: 85  HLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEK 144

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           AL ++++M+  G     IT ASV  +   +L +   ++ HGL++K G   N+ + ++L+ 
Sbjct: 145 ALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVD 204

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y KC     A  +F+E+  PN +++  ++    +     EA+ MF  MIR  +   + +
Sbjct: 205 IYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFT 264

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
            S+ L  C+                  S    G Q+H + I++G++ D  +S+SL+DMYA
Sbjct: 265 FSNALIACS----------------SISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYA 308

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K GD++SA  IF     ++++SW  +++GY                              
Sbjct: 309 KCGDLESACRIFELPSSKNLISWTSIVSGYAM---------------------------- 340

Query: 344 MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                  SG  +  R +FD MP  SV SWNAML+ Y+     +EA++    M+      D
Sbjct: 341 -------SGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDID 393

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             T+ +IL+ CA +  +ESGKQVH    +   + + +V + L+ +Y KC         F+
Sbjct: 394 HVTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFY 453

Query: 464 RIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
           ++    D + WN+++   + + L  EA   F +M Q E  P++F+  T+LS+CA + +  
Sbjct: 454 QMSHWRDRISWNALLTSHARHGLSEEAMTIFGEM-QWETTPSKFTLGTLLSACANIFALE 512

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
           QG+Q+H  + ++GY  D+    AL++MY KC  +  A + F     ++ + WN MI G  
Sbjct: 513 QGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMILGCC 572

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
            NG G + + L+  M   GVKPD ITF  IL  C   GL  +G E FNSM   + + P L
Sbjct: 573 HNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRL 632

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           +HY  MI+  GR G   E E  I  MP +    +   + ++C  H + RL K AAE+L  
Sbjct: 633 EHYESMIELYGRHGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLNE 692

Query: 703 LDPKNSAPYSLL 714
           L+P     + +L
Sbjct: 693 LNPSTPFHFQIL 704



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 176/696 (25%), Positives = 291/696 (41%), Gaps = 160/696 (22%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V  + + +H++        FL NR IE Y KC+    A+ LF++MP +D  SWNA   
Sbjct: 75  AIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNA--- 131

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                       +I+A  + G  EKAL ++++M+  G     IT
Sbjct: 132 ----------------------------MITAYAQGGCAEKALWLFSRMNRLGIWANEIT 163

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            ASV  +   +L +   ++ HGL++K G   N+ + ++L+ +Y KC     A  +F+E+ 
Sbjct: 164 FASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIE 223

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
            PN +++  ++    +     EA+ MF  MIR  +   + + S+ L  C+          
Sbjct: 224 NPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACS---------- 273

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS------------ 290
                   S    G Q+H + I++G++ D  +S+SL+DMYAK GD++S            
Sbjct: 274 ------SISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKN 327

Query: 291 -------------------AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
                              A V+F  +PERSV+SWN M+AGY    Q  +A+E +  M+ 
Sbjct: 328 LISWTSIVSGYAMSGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRK 387

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVS--------------------- 370
              + D VT   +L  C    D+++G+++   +    +                      
Sbjct: 388 ATQDIDHVTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRS 447

Query: 371 ---------------SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
                          SWNA+L+S+++    +EA+ +F EMQ+    P + TL  +LS+CA
Sbjct: 448 TRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQWE-TTPSKFTLGTLLSACA 506

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
            +  LE GKQ+H   ++    ID      L+ +YSKC+  E A +VF   P  D++ WNS
Sbjct: 507 NIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNS 566

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MI G   N    +    F  M +  + P   +F  +L                       
Sbjct: 567 MILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGIL----------------------- 603

Query: 536 YVNDIFVGSALIEMYCKCGDIYG-ARQFFDMMHGKNTVT-----WNEMIHGYAQNGYGDE 589
                        + C C  + G   ++F+ M  K  +      +  MI  Y ++G+ DE
Sbjct: 604 -------------LGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYESMIELYGRHGFMDE 650

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
                K M     +P       +  ACS  G   +G
Sbjct: 651 LEDFIKRM---PFEPTVAMLTRVFNACSEHGHSRLG 683



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 203/424 (47%), Gaps = 26/424 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H   +R G  +D  + + LI++Y+KC +  SA  +F+    K++ SW +I+S    
Sbjct: 281 GIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAM 340

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S     A  LFDEMPER+V+SWN +++        E+AL     M        H+T+  +
Sbjct: 341 SGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLI 400

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
                 L DVE G++ HG + + GL  N++V NALL +Y KCG  +     F +MS   +
Sbjct: 401 LNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRD 460

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++ A+++  A+     EA+ +F  M +   +    +L ++L  CA        ++FA 
Sbjct: 461 RISWNALLTSHARHGLSEEAMTIFGEM-QWETTPSKFTLGTLLSACA--------NIFAL 511

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+Q+H   I+ G+E D+    +L+DMY+K   ++ A  +F   P R ++ 
Sbjct: 512 E--------QGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLIL 563

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI G     +    + L   M+  G +PD +T   +L+ C+  G    G E F+SM 
Sbjct: 564 WNSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMS 623

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           +     P +  + +M+  Y +     E     + M F   +P    L  + ++C+  G  
Sbjct: 624 NKYCIIPRLEHYESMIELYGRHGFMDELEDFIKRMPF---EPTVAMLTRVFNACSEHGHS 680

Query: 421 ESGK 424
             GK
Sbjct: 681 RLGK 684



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 22/217 (10%)

Query: 503 PTQFS-FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
           P  FS +A +   C+   +  + R+V + +        IF+ +  IE Y KC  +  AR+
Sbjct: 57  PFPFSLYARLFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARE 116

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F+ M  ++  +WN MI  YAQ G  ++A+ L+  M   G+  ++ITF ++L +C+    
Sbjct: 117 LFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCA---- 172

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTC--------MIDCLGRAGHFHEAEMLIDEMPCKDD 673
               + +F S Q+ HG+  I+ +  C        ++D  G+     +A  + DE+    +
Sbjct: 173 --TVLALFLSKQI-HGL--IVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIE-NPN 226

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            + W V++   R +  +   K A    F++   N  P
Sbjct: 227 AISWNVIV---RRYLEMGNEKEAVVMFFKMIRANIRP 260


>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
          Length = 788

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 238/782 (30%), Positives = 372/782 (47%), Gaps = 122/782 (15%)

Query: 6   AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            G+ +HA IL+NG F   + ++  +L+  Y+KC                           
Sbjct: 44  TGQQIHARILKNGDFYAKNEYIETKLVIFYAKC--------------------------- 76

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
               D LE A  LF ++  RNV SW  +I    R GL E AL  + +M  +   P +  +
Sbjct: 77  ----DALEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVV 132

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +V KA  AL     GR  HG V K GLD  ++VA++L  +Y KCG    A  VF+E+ E
Sbjct: 133 PNVCKACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPE 192

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V + A+M G  +     EA+ +   M  + V    V++S+ L   A  G GVE    
Sbjct: 193 RNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMG-GVE---- 247

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q H L +  G E D  L  S+L+ Y K G ++ AE++F  +  + V
Sbjct: 248 -----------EGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKDV 296

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMK------------------------------SC- 332
           V+WN++I+GY Q+     AI + + M+                               C 
Sbjct: 297 VTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCY 356

Query: 333 ----GFEPDEV---TSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                FE D V   T+++M   C   G I   +++FDS     +  WN +L++Y++S   
Sbjct: 357 CIRHSFESDIVLASTAVDMYAKC---GSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLS 413

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            EA++LF EMQ   V P+  T  +I+ S    G ++  K++    L+  S       SG+
Sbjct: 414 GEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKKMF---LQMQS-------SGI 463

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           +                       IV W +M+ GL  N    EA  + ++M++  M P  
Sbjct: 464 VPT---------------------IVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNV 502

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDG-YVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           FS    LS+CA L+S   GR VH  I ++  + + + + ++L++MY KCGDI  A + F 
Sbjct: 503 FSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFR 562

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
                    +N MI  YA  G  +EA+ LY+ +   G+KPD+ITF  IL+AC+H+G ++ 
Sbjct: 563 RKLFSELPLYNAMISAYALYGNVEEAMALYRSLDDMGIKPDNITFTNILSACNHAGDINQ 622

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
            +EIF+ M   HGV+P L+HY  M+D L  AG   +A  L++EMP + D  + + LL++C
Sbjct: 623 AIEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQSLLATC 682

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
                  L +  +++L   +P NS  Y  ++N Y+  G WD++  +RE+M    + K P 
Sbjct: 683 NKEHKTELVEYLSKQLLESEPDNSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKQPG 742

Query: 745 YS 746
            S
Sbjct: 743 CS 744



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 163/326 (50%), Gaps = 15/326 (4%)

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI--DNYVAS 443
           KEA+ L  EM FR V+        IL  C       +G+Q+HA  LK       + Y+ +
Sbjct: 8   KEALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGQQIHARILKNGDFYAKNEYIET 67

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            L+  Y+KC   E+AE +F ++   ++  W ++I       L   A M F +M ++E++P
Sbjct: 68  KLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFP 127

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
             F    V  +C  L     GR VH  + K G  + +FV S+L +MY KCG +  AR+ F
Sbjct: 128 DNFVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVF 187

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           D +  +N V WN ++ GY QNG  +EA+RL  DM   GV+P  +T    L+A ++ G V+
Sbjct: 188 DEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVE 247

Query: 624 VG-----VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
            G     + + N ++LD+ +   + ++ C      + G    AEM+ D M  K D V W 
Sbjct: 248 EGKQSHALAVVNGLELDNILGTSVLNFYC------KVGLVEYAEMVFDRMVGK-DVVTWN 300

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLD 704
           +L+S       V  A R   +L RL+
Sbjct: 301 LLISGYVQQGLVEDAIRMC-KLMRLE 325


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 193/607 (31%), Positives = 316/607 (52%), Gaps = 54/607 (8%)

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREG 235
           +F++M+  +E+++T +++G        EAL +F  M ++  +  D   +S  L  C   G
Sbjct: 112 MFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKAC---G 168

Query: 236 CGVESDVFAQSDNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
            GV              N+  G+ +H  ++K G    + +S++L+DMY K G ++    +
Sbjct: 169 LGV--------------NICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRV 214

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  + +R+VVSW  +IAG      + +A+     M       D  T    L A   S  +
Sbjct: 215 FKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLL 274

Query: 355 KTGR-----------------------------------EMFDSMPSPSVSSWNAMLSSY 379
             G+                                    +F+ M  P V SW  ++++Y
Sbjct: 275 HHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTY 334

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
            Q    + A++ F+ M+   V P++ T A ++S+CA + I + G+Q+H   L+       
Sbjct: 335 VQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDAL 394

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            VA+ ++ +YSK    + A  VFH I   DI+ W+++IA  S      EAF +   MR+ 
Sbjct: 395 SVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRRE 454

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
              P +F+ ++VLS C  ++   QG+QVHA +   G  ++  V SALI MY KCG +  A
Sbjct: 455 GPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEA 514

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
            + F+ M   N ++W  MI+GYA++GY  EA+ L++ + + G+KPD +TF+ +LTACSH+
Sbjct: 515 SKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHA 574

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           G+VD+G   F  M  ++ + P  +HY C+ID L RAG   EAE +I  MPC  D V+W  
Sbjct: 575 GMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWST 634

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL SCR+H +V   +  AE+L RLDP ++  +  LANIY++ GRW +   +R+LM    +
Sbjct: 635 LLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGV 694

Query: 740 VKDPAYS 746
           +K+  +S
Sbjct: 695 IKERGWS 701



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 227/495 (45%), Gaps = 52/495 (10%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGF 116
           N+ L    K   L  +  +FD+M  R+ +SW  LI+  V      +AL +++ M    G 
Sbjct: 94  NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
                 ++   KA    +++  G   HG  +K GL  +++V++AL+ +Y K G  +    
Sbjct: 154 QRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCR 213

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VF++M++ N V++TA+++GL      +EAL  F  M    V  DS + +  L        
Sbjct: 214 VFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALK------- 266

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                  A +D+      HG+ +H  TIK GF+    + N+L  MY K G  D    +F 
Sbjct: 267 -------ASADSSLLH--HGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFE 317

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------- 349
            +    VVSW  +I  Y QK +   A+E  +RM+     P++ T   ++ AC        
Sbjct: 318 KMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKW 377

Query: 350 ----------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                                       +SG +K+   +F  +    + SW+ +++ YSQ
Sbjct: 378 GEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQ 437

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
               KEA      M+  G KP+   L+ +LS C +M +LE GKQVHA  L      +  V
Sbjct: 438 GGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMV 497

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            S LI +YSKC   E A ++F+ +   +I+ W +MI G + +    EA   F+++    +
Sbjct: 498 HSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGL 557

Query: 502 YPTQFSFATVLSSCA 516
            P   +F  VL++C+
Sbjct: 558 KPDYVTFIGVLTACS 572



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 214/454 (47%), Gaps = 86/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+LLH   +++GL +  F+ + LI++Y K                               
Sbjct: 176 GELLHGFSVKSGLINSVFVSSALIDMYMKVGK---------------------------- 207

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITLA 124
              +E   ++F +M +RNVVSW  +I+ LV  G   +AL  +++M  S  G+  +H T A
Sbjct: 208 ---IEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGY-DSH-TFA 262

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
              KAS     + HG+  H   IK G D++ +V N L ++Y KCG   + + +FE+M  P
Sbjct: 263 IALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMP 322

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++T +++   +      A+E F+ M +  VS +  + ++V+  CA            
Sbjct: 323 DVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACA------------ 370

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 +    G+Q+H   ++LG    L ++NS++ +Y+K+G + SA ++F  +  + ++
Sbjct: 371 ----NLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDII 426

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           SW+ +IA Y Q   + +A + L  M+  G +P+E    ++L  C                
Sbjct: 427 SWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHV 486

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + G ++   ++F+ M   ++ SW AM++ Y++    +EAI
Sbjct: 487 LCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAI 546

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            LF ++   G+KPD  T   +L++C+  G+++ G
Sbjct: 547 NLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLG 580



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 194/423 (45%), Gaps = 55/423 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   ++ G  + +F+ N L  +Y+KC        LF+KM                 
Sbjct: 277 GKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKM----------------- 319

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                       +MP+  VVSW  LI+  V+ G EE A+  + +M      P   T A+V
Sbjct: 320 ------------KMPD--VVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAV 365

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L   + G + HG V+++GL   + VAN++++LY+K G  K A  VF  ++  + 
Sbjct: 366 ISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDI 425

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           ++++ +++  ++     EA +    M R+    +  +LSSVL VC               
Sbjct: 426 ISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCG-------------- 471

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+QVH   + +G + +  + ++L+ MY+K G ++ A  IF+ +   +++SW
Sbjct: 472 --SMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISW 529

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             MI GY +   S +AI L +++ S G +PD VT I +L AC  +G +  G   F  M  
Sbjct: 530 TAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTN 589

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               SPS   +  ++    ++    EA  + R M       D    + +L SC   G ++
Sbjct: 590 EYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMP---CYTDDVVWSTLLRSCRVHGDVD 646

Query: 422 SGK 424
            G+
Sbjct: 647 RGR 649



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 209/449 (46%), Gaps = 38/449 (8%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL---------L 326
           NS L    K G +  +  +F  +  R  +SW  +IAGY     S +A+ L         L
Sbjct: 94  NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153

Query: 327 QR--------MKSCGF---------------EPDEVTSINMLVACV----RSGDIKTGRE 359
           QR        +K+CG                +   + S+ +  A +    + G I+ G  
Sbjct: 154 QRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCR 213

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F  M   +V SW A+++    +  + EA+  F EM    V  D  T AI L + A   +
Sbjct: 214 VFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSL 273

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L  GK +H  ++K      ++V + L  +Y+KC + +   R+F ++   D+V W ++I  
Sbjct: 274 LHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITT 333

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
                 +  A   FK+MR++ + P +++FA V+S+CA L+ +  G Q+H  + + G V+ 
Sbjct: 334 YVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDA 393

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           + V ++++ +Y K G +  A   F  +  K+ ++W+ +I  Y+Q GY  EA      M  
Sbjct: 394 LSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRR 453

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
            G KP++    ++L+ C    L++ G ++ ++  L  G++     ++ +I    + G   
Sbjct: 454 EGPKPNEFALSSVLSVCGSMALLEQGKQV-HAHVLCIGIDHEAMVHSALISMYSKCGSVE 512

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           EA  + + M   ++ + W  +++    H 
Sbjct: 513 EASKIFNGMKI-NNIISWTAMINGYAEHG 540


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 201/592 (33%), Positives = 320/592 (54%), Gaps = 44/592 (7%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           NA++S Y + G  + A  +F+EM E + V++  M+ G  +   + +A E+F  M  +   
Sbjct: 94  NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPER--- 150

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            D  S +++L   A+ GC         +   F R      V                N+L
Sbjct: 151 -DVCSWNTILSGYAQNGC------VDDARRVFDRMPEKNDVSW--------------NAL 189

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           L  Y +N  ++ A V+F +    ++VSWN ++ G+ +K +  +A +    MK      D 
Sbjct: 190 LSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKV----RDV 245

Query: 339 VTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           V+   ++    ++G+I   R++FD  P   V +W AM+S Y Q+   +EA +LF  M   
Sbjct: 246 VSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM--- 302

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAAS----LKTASHIDNYVASGLIGIYSKCQR 454
              P+R  +    S  A +     G++V  A     +    ++  +  + +I  Y++C +
Sbjct: 303 ---PERNEV----SWNAMLAGYVQGERVEMAKELFDVMPCRNVSTW--NTMITGYAQCGK 353

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              A+ +F ++P+ D V W +MIAG S +    EA   F  M +      + SF++ LS+
Sbjct: 354 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALST 413

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           CA + +   G+Q+H ++ K GY    FVG+AL+ MYCKCG I  A   F  M GK+ V+W
Sbjct: 414 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 473

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI GY+++G+G+EA+R ++ M   G+KPDD T VA+L+ACSH+GLVD G + F++M  
Sbjct: 474 NTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQ 533

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           D+GV P   HY CM+D LGRAG   EA  L+  MP + D  IW  LL + R+H N  LA+
Sbjct: 534 DYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAE 593

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA+++F ++P+NS  Y LL+N+Y+S GRW D+  +R  M +  + K P YS
Sbjct: 594 TAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYS 645



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 253/564 (44%), Gaps = 72/564 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTH-----SAQHLFDKMPHKDIYSWNAIL 61
           G L   H   NGL       N     +S  ++T      S      K    DI  WN  +
Sbjct: 7   GALSRRHTSLNGLKRRYNNANSASNFHSSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAI 66

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           S+  ++     A ++F  MP  + VS+N +IS  +RNG  E A  ++++M     V  ++
Sbjct: 67  SSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNV 126

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            +    +        E   R          ++++   N +LS YA+ G    A  VF+ M
Sbjct: 127 MIKGYVRNRNLGKARELFERMP--------ERDVCSWNTILSGYAQNGCVDDARRVFDRM 178

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E N+V++ A++S   +  ++ EA  +F      A+    VS + +LG   ++   VE+ 
Sbjct: 179 PEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWAL----VSWNCLLGGFVKKKKIVEAR 234

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
            F  S               + ++     D+   N+++  YA+NG++D A  +F   P  
Sbjct: 235 QFFDS---------------MKVR-----DVVSWNTIITGYAQNGEIDEARQLFDESPVH 274

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
            V +W  M++GY Q     +A EL  RM     E +EV+   ML   V+   ++  +E+F
Sbjct: 275 DVFTWTAMVSGYIQNRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELF 330

Query: 362 DSMPSPSVSSWN-------------------------------AMLSSYSQSENHKEAIK 390
           D MP  +VS+WN                               AM++ YSQS +  EA++
Sbjct: 331 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALR 390

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF  M+  G + +R++ +  LS+CA +  LE GKQ+H   +K       +V + L+ +Y 
Sbjct: 391 LFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 450

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   E A  +F  +   DIV WN+MIAG S +    EA  FF+ M++  + P   +   
Sbjct: 451 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVA 510

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKD 534
           VLS+C+      +GRQ    + +D
Sbjct: 511 VLSACSHTGLVDKGRQYFHTMTQD 534



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 156/333 (46%), Gaps = 22/333 (6%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N ++  Y +      A+ LFD MP +++ +WN +++   +   +  A  LFD+MP+R+ V
Sbjct: 311 NAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 370

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  +I+   ++G   +AL ++  M  EG      + +S       ++ +E G++ HG +
Sbjct: 371 SWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 430

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K G +   +V NALL +Y KCG  + A  +F+EM+  + V++  M++G ++     EAL
Sbjct: 431 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEAL 490

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
             F  M R+ +  D  ++ +VL  C+  G   +                 Q  H +T   
Sbjct: 491 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR---------------QYFHTMTQDY 535

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVSWNVMIAGYGQKYQSTKAIEL 325
           G   +      ++D+  + G ++ A  +  N+P E     W  ++ G  + + +T+  E 
Sbjct: 536 GVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLL-GASRVHGNTELAET 594

Query: 326 LQRMKSCGFEPDE----VTSINMLVACVRSGDI 354
               K    EP+     V   N+  +  R GD+
Sbjct: 595 AAD-KIFAMEPENSGMYVLLSNLYASSGRWGDV 626


>gi|302142721|emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  345 bits (884), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 207/672 (30%), Positives = 336/672 (50%), Gaps = 53/672 (7%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
           HL    P   I+  N  +    K   L+ A +LF+EMP+R+  SWN +I+A  + G  EK
Sbjct: 85  HLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEK 144

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           AL ++++M+  G     IT ASV  +   +L +   ++ HGL++K G   N+ + ++L+ 
Sbjct: 145 ALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVD 204

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y KC     A  +F+E+  PN +++  ++    +     EA+ MF  MIR  +   + +
Sbjct: 205 IYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFT 264

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
            S+ L  C+                  S    G Q+H + I++G++ D  +S+SL+DMYA
Sbjct: 265 FSNALIACS----------------SISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYA 308

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K GD++SA  IF     ++++SW  +++GY                              
Sbjct: 309 KCGDLESACRIFELPSSKNLISWTSIVSGYAM---------------------------- 340

Query: 344 MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                  SG  +  R +FD MP  SV SWNAML+ Y+     +EA++    M+      D
Sbjct: 341 -------SGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDID 393

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             T+ +IL+ CA +  +ESGKQVH    +   + + +V + L+ +Y KC         F+
Sbjct: 394 HVTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFY 453

Query: 464 RIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
           ++    D + WN+++   + + L  EA   F +M Q E  P++F+  T+LS+CA + +  
Sbjct: 454 QMSHWRDRISWNALLTSHARHGLSEEAMTIFGEM-QWETTPSKFTLGTLLSACANIFALE 512

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
           QG+Q+H  + ++GY  D+    AL++MY KC  +  A + F     ++ + WN MI G  
Sbjct: 513 QGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMILGCC 572

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
            NG G + + L+  M   GVKPD ITF  IL  C   GL  +G E FNSM   + + P L
Sbjct: 573 HNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRL 632

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           +HY  MI+  GR G   E E  I  MP +    +   + ++C  H + RL K AAE+L  
Sbjct: 633 EHYESMIELYGRHGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLNE 692

Query: 703 LDPKNSAPYSLL 714
           L+P     + +L
Sbjct: 693 LNPSTPFHFQIL 704



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 176/696 (25%), Positives = 291/696 (41%), Gaps = 160/696 (22%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V  + + +H++        FL NR IE Y KC+    A+ LF++MP +D  SWNA   
Sbjct: 75  AIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNA--- 131

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                       +I+A  + G  EKAL ++++M+  G     IT
Sbjct: 132 ----------------------------MITAYAQGGCAEKALWLFSRMNRLGIWANEIT 163

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            ASV  +   +L +   ++ HGL++K G   N+ + ++L+ +Y KC     A  +F+E+ 
Sbjct: 164 FASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIE 223

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
            PN +++  ++    +     EA+ MF  MIR  +   + + S+ L  C+          
Sbjct: 224 NPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACS---------- 273

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS------------ 290
                   S    G Q+H + I++G++ D  +S+SL+DMYAK GD++S            
Sbjct: 274 ------SISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKN 327

Query: 291 -------------------AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
                              A V+F  +PERSV+SWN M+AGY    Q  +A+E +  M+ 
Sbjct: 328 LISWTSIVSGYAMSGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRK 387

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVS--------------------- 370
              + D VT   +L  C    D+++G+++   +    +                      
Sbjct: 388 ATQDIDHVTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRS 447

Query: 371 ---------------SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
                          SWNA+L+S+++    +EA+ +F EMQ+    P + TL  +LS+CA
Sbjct: 448 TRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQWE-TTPSKFTLGTLLSACA 506

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
            +  LE GKQ+H   ++    ID      L+ +YSKC+  E A +VF   P  D++ WNS
Sbjct: 507 NIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNS 566

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MI G   N    +    F  M +  + P   +F  +L                       
Sbjct: 567 MILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGIL----------------------- 603

Query: 536 YVNDIFVGSALIEMYCKCGDIYG-ARQFFDMMHGKNTVT-----WNEMIHGYAQNGYGDE 589
                        + C C  + G   ++F+ M  K  +      +  MI  Y ++G+ DE
Sbjct: 604 -------------LGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYESMIELYGRHGFMDE 650

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
                K M     +P       +  ACS  G   +G
Sbjct: 651 LEDFIKRM---PFEPTVAMLTRVFNACSEHGHSRLG 683



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 203/424 (47%), Gaps = 26/424 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H   +R G  +D  + + LI++Y+KC +  SA  +F+    K++ SW +I+S    
Sbjct: 281 GIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAM 340

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S     A  LFDEMPER+V+SWN +++        E+AL     M        H+T+  +
Sbjct: 341 SGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLI 400

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
                 L DVE G++ HG + + GL  N++V NALL +Y KCG  +     F +MS   +
Sbjct: 401 LNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRD 460

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++ A+++  A+     EA+ +F  M +   +    +L ++L  CA        ++FA 
Sbjct: 461 RISWNALLTSHARHGLSEEAMTIFGEM-QWETTPSKFTLGTLLSACA--------NIFAL 511

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+Q+H   I+ G+E D+    +L+DMY+K   ++ A  +F   P R ++ 
Sbjct: 512 E--------QGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLIL 563

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI G     +    + L   M+  G +PD +T   +L+ C+  G    G E F+SM 
Sbjct: 564 WNSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMS 623

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           +     P +  + +M+  Y +     E     + M F   +P    L  + ++C+  G  
Sbjct: 624 NKYCIIPRLEHYESMIELYGRHGFMDELEDFIKRMPF---EPTVAMLTRVFNACSEHGHS 680

Query: 421 ESGK 424
             GK
Sbjct: 681 RLGK 684



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 22/217 (10%)

Query: 503 PTQFS-FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
           P  FS +A +   C+   +  + R+V + +        IF+ +  IE Y KC  +  AR+
Sbjct: 57  PFPFSLYARLFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARE 116

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F+ M  ++  +WN MI  YAQ G  ++A+ L+  M   G+  ++ITF ++L +C+    
Sbjct: 117 LFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCA---- 172

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTC--------MIDCLGRAGHFHEAEMLIDEMPCKDD 673
               + +F S Q+ HG+  I+ +  C        ++D  G+     +A  + DE+    +
Sbjct: 173 --TVLALFLSKQI-HGL--IVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIE-NPN 226

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            + W V++   R +  +   K A    F++   N  P
Sbjct: 227 AISWNVIV---RRYLEMGNEKEAVVMFFKMIRANIRP 260


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 223/779 (28%), Positives = 378/779 (48%), Gaps = 86/779 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA I ++ +    F+ + L+ +Y  C +      L D                   
Sbjct: 17  GKEVHARICKSAMDRGPFMGDLLVRMYVDCGS------LID------------------- 51

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A   FD MP ++ ++W  LI A  + G  E+AL ++  M  EG  P +    +V
Sbjct: 52  ------AKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAV 105

Query: 127 FKASTALLDV-EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A +A  ++ E GRR HG++    ++ + YV+  LL +Y KC   + A  VF+ +    
Sbjct: 106 LGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKR 165

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-EGCGVESDVFA 244
            V + AM++  A+ D   +A+++F  M+ + V  + ++   VL  C++ +   V   V  
Sbjct: 166 VVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKL 225

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
             + +   ++H               D   + +L++ Y   GD++ A   FS      ++
Sbjct: 226 CVEEREHDHLH---------------DSSFATALVNFYGSCGDLEQAFRAFSR-HRLELI 269

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------ 358
               MI  Y Q+ +  +A+EL + M   G + D +  + +L AC     ++ GR      
Sbjct: 270 LATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFM 329

Query: 359 -----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                        E+F SM    V SWN +++++ Q   H EA+
Sbjct: 330 REIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEAL 389

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            L   MQ  GVK D+ +    L  CAA   L  G+ +H+  +++    D  + + ++ +Y
Sbjct: 390 HLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMY 449

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS-LDIEAFMFFKQMRQNEMYPTQFSF 508
             C+  + A RVF  +   D V WN+MI   +    L  EA + F+QM+ +   P   SF
Sbjct: 450 GSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISF 509

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
              LS+CA  +S  +G+ +H +I + G  +++ V +A++ MY K G +  AR+ F  M  
Sbjct: 510 VAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPL 569

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            + ++WN MI  +AQ+G+ D+ +R ++ M   G  P+D+TFV++++ACSH GLV  GV++
Sbjct: 570 PDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQL 629

Query: 629 FNSMQLDH-GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           F S+  D   + P  +HY CM+D + RAG    AE  I   P K D VI   +L + ++H
Sbjct: 630 FVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVH 689

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +V  A+++AE L  L P  SA Y +L+N+Y  +G+ D+   +R LM E  I K+PA+S
Sbjct: 690 KDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFS 748



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 1/199 (0%)

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L+ GK+VHA   K+A     ++   L+ +Y  C     A+  F R+P  D + W  +I  
Sbjct: 14  LDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRA 73

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVN 538
                   +A   F+ M+   + P   +F  VL +C+       +GR++H  +      +
Sbjct: 74  HGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMES 133

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           D +V + L+ MY KC  +  AR+ FD +  K  V WN MI  YAQ  + ++A++++  M+
Sbjct: 134 DHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAML 193

Query: 599 ASGVKPDDITFVAILTACS 617
             GVK + ITF+ +L ACS
Sbjct: 194 LEGVKAERITFIGVLDACS 212



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 7/179 (3%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +A +L   A   S   G++VHA+I K       F+G  L+ MY  CG +  A+  FD M 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG-LVDVGV 626
            ++ +TW  +I  + Q G  ++A+ L++ M   GV P +  FVA+L ACS    L++ G 
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 627 EIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            I   ++   G     DHY  T ++   G+     +A  + D +  K   V W  ++++
Sbjct: 121 RIHGVLR---GTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHK-RVVEWNAMITA 175


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 208/709 (29%), Positives = 356/709 (50%), Gaps = 54/709 (7%)

Query: 75  KLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALL 134
           K+FDEMP+R   +WN +I A V NG    AL++Y  M  EG      +  ++ KA   L 
Sbjct: 100 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 159

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE-VTFTAMM 193
           D+  G   H L++K+G     ++ NAL+S+YAK      A  +F+   E  + V + +++
Sbjct: 160 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 219

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           S  + + + +E LE+FR M     + +S ++ S L  C                + FS  
Sbjct: 220 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC----------------DGFSYA 263

Query: 254 VHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
             G+++H   +K     ++L++ N+L+ MY + G M  AE I   +    VV+WN +I G
Sbjct: 264 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 323

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------------ 360
           Y Q     +A+E    M + G + DEV+  +++ A  R  ++  G E+            
Sbjct: 324 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 383

Query: 361 -----------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                                  F  M    + SW  +++ Y+Q++ H EA++LFR++  
Sbjct: 384 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 443

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
           + ++ D   L  IL + + +  +   K++H   L+    +D  + + L+ +Y KC+    
Sbjct: 444 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGY 502

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A RVF  I   D+V W SMI+  +LN  + EA   F++M +  +     +   +LS+ A 
Sbjct: 503 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 562

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           LS+  +GR++H  + + G+  +  +  A+++MY  CGD+  A+  FD +  K  + +  M
Sbjct: 563 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSM 622

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I+ Y  +G G  AV L+  M    V PD I+F+A+L ACSH+GL+D G      M+ ++ 
Sbjct: 623 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 682

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           +EP  +HY C++D LGRA    EA   +  M  +    +W  LL++CR H+   + + AA
Sbjct: 683 LEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAA 742

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + L  L+PKN     L++N+++  GRW+D+  VR  M  + + K P  S
Sbjct: 743 QRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCS 791



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 217/455 (47%), Gaps = 54/455 (11%)

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
           S E +F  +P+R+  +WN MI  Y    +   A+ L   M+  G      +   +L AC 
Sbjct: 97  SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 156

Query: 350 RSGDIKTG-----------------------------------REMFDSMPSPSVSS-WN 373
           +  DI++G                                   R +FD       +  WN
Sbjct: 157 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 216

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           ++LSSYS S    E ++LFREM   G  P+  T+   L++C      + GK++HA+ LK+
Sbjct: 217 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 276

Query: 434 ASHIDN-YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
           ++H    YV + LI +Y++C +   AER+  ++   D+V WNS+I G   N +  EA  F
Sbjct: 277 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 336

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           F  M        + S  +++++  +LS+   G ++HA + K G+ +++ VG+ LI+MY K
Sbjct: 337 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 396

Query: 553 CG-DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           C    Y  R F   MH K+ ++W  +I GYAQN    EA+ L++D+    ++ D++   +
Sbjct: 397 CNLTCYMGRAFLR-MHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGS 455

Query: 612 ILTACS--HSGLV--DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           IL A S   S L+  ++   I     LD  ++  L      +D  G+  +   A  + + 
Sbjct: 456 ILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNEL------VDVYGKCRNMGYATRVFES 509

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           +  K D V W  ++SS  L+ N    +  A ELFR
Sbjct: 510 IKGK-DVVSWTSMISSSALNGN----ESEAVELFR 539



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 242/556 (43%), Gaps = 83/556 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK-DIYSWNAILSAQ 64
           +G  LH+ +++ G     F+ N L+ +Y+K ++  +A+ LFD    K D   WN+ILS+ 
Sbjct: 163 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 222

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
             S                               G   + L ++ +M   G  P   T+ 
Sbjct: 223 STS-------------------------------GKSLETLELFREMHMTGPAPNSYTIV 251

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           S   A       + G+  H  V+K       +YV NAL+++Y +CG    A  +  +M+ 
Sbjct: 252 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 311

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + VT+ +++ G  +     EALE F  MI      D VS++S++    R          
Sbjct: 312 ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR---------- 361

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                  S  + G ++H   IK G++++L + N+L+DMY+K          F  + ++ +
Sbjct: 362 ------LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL 415

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------- 348
           +SW  +IAGY Q     +A+EL + +     E DE+   ++L A                
Sbjct: 416 ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 475

Query: 349 -VRSGDIKT------------------GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
            +R G + T                     +F+S+    V SW +M+SS + + N  EA+
Sbjct: 476 ILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAV 535

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +LFR M   G+  D   L  ILS+ A++  L  G+++H   L+    ++  +A  ++ +Y
Sbjct: 536 ELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMY 595

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           + C   + A+ VF RI    ++ + SMI    ++     A   F +MR   + P   SF 
Sbjct: 596 ACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFL 655

Query: 510 TVLSSCAKLSSSFQGR 525
            +L +C+      +GR
Sbjct: 656 ALLYACSHAGLLDEGR 671



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 174/360 (48%), Gaps = 48/360 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           +AG  LHA+++++G   +  + N LI++YSKCN T      F +M  KD+ SW  +++  
Sbjct: 366 LAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGY 425

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            ++D    A +LF ++ ++             R  ++E                  + L 
Sbjct: 426 AQNDCHVEALELFRDVAKK-------------RMEIDE------------------MILG 454

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+ +AS+ L  +   +  H  +++ GL   + + N L+ +Y KC    +A  VFE +   
Sbjct: 455 SILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGK 513

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++T+M+S  A      EA+E+FR M+   +S DSV+L           C + +    
Sbjct: 514 DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL----------CILSAAASL 563

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            + NK      G+++HC  ++ GF  +  ++ +++DMYA  GD+ SA+ +F  +  + ++
Sbjct: 564 SALNK------GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLL 617

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
            +  MI  YG       A+EL  +M+     PD ++ + +L AC  +G +  GR     M
Sbjct: 618 QYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIM 677


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 184/492 (37%), Positives = 276/492 (56%), Gaps = 37/492 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+QVH   IK      L++SN LLDMYAK G +  AE +F  +  R + SWN+MI+GY  
Sbjct: 138 GKQVHA-HIKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGY-- 194

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                            V+ G+ +  R +FD MP+    SW A+
Sbjct: 195 ---------------------------------VKGGNFEKARNLFDKMPNRDNFSWTAI 221

Query: 376 LSSYSQSENHKEAIKLFREMQFRGV-KPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           +S   Q    +EA++L+R MQ     K ++ T++  L++ AA+  L  GK++H   ++  
Sbjct: 222 ISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMG 281

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V   L+ +Y KC   E A  +F ++ E D+V W +MI     N    E F  F+
Sbjct: 282 LDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFR 341

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
            +  + + P  F+FA VL++CA L++   G+Q+HA + + G+ +     SAL+ MY KCG
Sbjct: 342 HLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCG 401

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
           DI  A+  F+++   +  +W  ++ GYAQ+G  D+A+  ++ ++ SG KPD I F+ +L+
Sbjct: 402 DIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLS 461

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           AC+H+GLVD G+E F+S++  HG+   +DHY C+ID L RAG F EAE +I+EMP K D 
Sbjct: 462 ACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDK 521

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
            IW  LL  CR+H N+ LAKRAA+ LF ++P+N A Y  LANIY+S G   +   +RE M
Sbjct: 522 YIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETM 581

Query: 735 SENCIVKDPAYS 746
               IVK P  S
Sbjct: 582 DSRGIVKKPGMS 593



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 231/431 (53%), Gaps = 26/431 (6%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++A   GK +HAHI  +G     ++ NRL+++Y+KC +   A+ +FD+M H+D+ SWN +
Sbjct: 132 QRALKEGKQVHAHIKTSGSIG-LYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIM 190

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +S   K  + E A  LFD+MP R+  SW  +IS  V++   E+AL +Y  M    +  ++
Sbjct: 191 ISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSN 250

Query: 121 -ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             T++S   AS A+  +  G++ HG ++++GLD +  V  +LL +Y KCG  + A  +F+
Sbjct: 251 KCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFD 310

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           +M E + V++T M+    K  R  E   +FR ++   +  +  + + VL  CA       
Sbjct: 311 KMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACA------- 363

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
            D+ A+          G+Q+H   +++GF++    +++L+ MY+K GD+++A+ +F  LP
Sbjct: 364 -DLAAED--------LGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILP 414

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           +  + SW  ++ GY Q  Q  KA+   + +   G +PD +  I +L AC  +G +  G E
Sbjct: 415 QPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLE 474

Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
            F S+      + ++  +  ++   +++    EA  +  EM    +KPD+   A +L  C
Sbjct: 475 YFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMP---IKPDKYIWAALLGGC 531

Query: 415 AAMGILESGKQ 425
              G LE  K+
Sbjct: 532 RIHGNLELAKR 542



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 151/340 (44%), Gaps = 47/340 (13%)

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +EA++L     +R  KP  +    +L  C     L+ GKQVHA  +KT+  I  Y+++ L
Sbjct: 105 REAVQLL----YRIEKPYASIYLTLLKFCLKQRALKEGKQVHA-HIKTSGSIGLYISNRL 159

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC     AE+VF  +   D+  WN MI+G        +A   F +M   +     
Sbjct: 160 LDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRD----N 215

Query: 506 FSFATVLSSCAK------------------------------------LSSSFQGRQVHA 529
           FS+  ++S C +                                    + S   G+++H 
Sbjct: 216 FSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHG 275

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            I + G  +D  V  +L++MY KCG I  AR  FD M  ++ V+W  MIH Y +NG  +E
Sbjct: 276 HIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREE 335

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
              L++ ++ S + P+D TF  +L AC+     D+G +I   M +  G +      + ++
Sbjct: 336 GFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYM-VRVGFDSFSSAASALV 394

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
               + G    A+ + + +P + D   W  LL     H  
Sbjct: 395 HMYSKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQHGQ 433



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 30/257 (11%)

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P    + T+L  C K  +  +G+QVHA I+  G +  +++ + L++MY KCG +  A + 
Sbjct: 117 PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSIG-LYISNRLLDMYAKCGSLVDAEKV 175

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           FD M  ++  +WN MI GY + G  ++A  L+  M       D+ ++ AI++ C      
Sbjct: 176 FDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM----PNRDNFSWTAIISGCVQHNRP 231

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDC------------LGRAGHFHEAEMLIDEMPC 670
           +  +E++  MQ  H          C I              +G+  H H   M +D    
Sbjct: 232 EEALELYRLMQ-KHDYS---KSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLD---- 283

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
             D V+W  LL    ++      + A     +++ ++   ++ + + Y   GR ++  A+
Sbjct: 284 -SDEVVWCSLLD---MYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFAL 339

Query: 731 -RELMSENCIVKDPAYS 746
            R LM+ N +  D  ++
Sbjct: 340 FRHLMNSNIMPNDFTFA 356


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 213/691 (30%), Positives = 351/691 (50%), Gaps = 81/691 (11%)

Query: 103 KALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALL 162
           +A+S Y  M   G  P +    +V KA+  + D+  G++ H  V K G      V N+L+
Sbjct: 68  QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
           ++Y KCG    A  VF+E++  ++V++ +M++   + +    A+ +FRLM+ + V   S 
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
           +L SV   C+               N  +  + G+QVH   ++ G +     +N+L+ MY
Sbjct: 188 TLVSVAHACS---------------NLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMY 231

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           AK G +  A+ +F    ++ +VSWN +I+   Q  +  +A+  L  M   G  P+ VT  
Sbjct: 232 AKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLA 291

Query: 343 NMLVAC----------------VRSGDI--------------------KTGREMFDSMPS 366
           ++L AC                + + D+                    + GR +FD M  
Sbjct: 292 SVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFR 351

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGILESGKQ 425
            +++ WNAM++ Y ++E   EAI+LF EM F  G+ P+  TL+ +L +C         + 
Sbjct: 352 RTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEG 411

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL----- 480
           +H+  +K     D YV + L+ +YS+  R E+A  +F  +   DIV WN+MI G      
Sbjct: 412 IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGR 471

Query: 481 ---SLNSLD----------IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
              +LN L           I  F  ++  +   + P   +  TVL  CA L++  +G+++
Sbjct: 472 HDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEI 531

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           HA   K     D+ VGSAL++MY KCG +  +R  F+ M  +N +TWN +I  Y  +G G
Sbjct: 532 HAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKG 591

Query: 588 DEAVRLYKDMIASG-----VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           +EA++L++ M+  G     ++P+++T++AI  + SHSG+VD G+ +F +M+  HG+EP  
Sbjct: 592 EEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTS 651

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV-IWEVLLSSCRLHANVRLAKRAAEELF 701
           DHY C++D LGR+G   EA  LI  MP     V  W  LL +C++H N+ + + AA+ LF
Sbjct: 652 DHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLF 711

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
            LDP N   Y       S LGR    + VR+
Sbjct: 712 VLDP-NVLDY---GTKQSMLGRKMKEKGVRK 738



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 155/572 (27%), Positives = 254/572 (44%), Gaps = 115/572 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHAH+ + G    T + N L+ +Y KC +  +A+ +FD++ ++D  SWN++++A C+
Sbjct: 104 GKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACR 163

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            ++ E A  LF  M   NV                                PT  TL SV
Sbjct: 164 FEEWELAVHLFRLMLLENV-------------------------------GPTSFTLVSV 192

Query: 127 FKASTALLD-VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A + L++ +  G++ H  V++ G D   +  NAL+++YAK G    A  +F+   + +
Sbjct: 193 AHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKD 251

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR---EGCGVESDV 242
            V++  ++S L++ DR  EAL    +M++  V  + V+L+SVL  C+     GCG E   
Sbjct: 252 LVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHA 311

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
           F   +N    N     V C               +L+DMY      +   ++F  +  R+
Sbjct: 312 FVLMNNDLIEN---SFVGC---------------ALVDMYCNCKQPEKGRLVFDGMFRRT 353

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMK-SCGFEPDEVTSINMLVACVRS---------- 351
           +  WN MIAGY +     +AIEL   M    G  P+ VT  ++L ACVR           
Sbjct: 354 IAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIH 413

Query: 352 -------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                    G I+  R +F SM    + SWN M++ Y     H 
Sbjct: 414 SCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHD 473

Query: 387 EAIKLFREMQFRG-------------------VKPDRTTLAIILSSCAAMGILESGKQVH 427
           +A+ L  +MQ RG                   +KP+  TL  +L  CAA+  L  GK++H
Sbjct: 474 DALNLLHDMQ-RGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIH 532

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
           A ++K     D  V S L+ +Y+KC    L+  VF ++   +++ WN +I    ++    
Sbjct: 533 AYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGE 592

Query: 488 EAFMFFKQM-----RQNEMYPTQFSFATVLSS 514
           EA   F++M        E+ P + ++  + +S
Sbjct: 593 EALKLFRRMVEEGDNNREIRPNEVTYIAIFAS 624



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 213/477 (44%), Gaps = 108/477 (22%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA +LRNG +  TF  N L+ +Y+K    + A+ LFD                   
Sbjct: 206 GKQVHAFVLRNGDWR-TFTNNALVTMYAKLGRVYEAKTLFD------------------- 245

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +FD+   +++VSWN +IS+L +N   E+AL   + M   G  P  +TLASV
Sbjct: 246 ---------VFDD---KDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASV 293

Query: 127 FKASTALLDVEHGRRCHGLVI-KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A + L  +  G+  H  V+    L +N +V  AL+ +Y  C   +    VF+ M    
Sbjct: 294 LPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRT 353

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFA 244
              + AM++G  + +   EA+E+F  M+ +  +S +SV+LSSVL  C R       + F 
Sbjct: 354 IAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVR------CESFL 407

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
             +           +H   +K GFE D ++ N+L+DMY++ G ++ A  IF ++  + +V
Sbjct: 408 DKEG----------IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIV 457

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRM------------------KSCGFEPDEVTSINMLV 346
           SWN MI GY    +   A+ LL  M                  K+   +P+ VT + +L 
Sbjct: 458 SWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLP 517

Query: 347 AC-------------------VRSGDIKTG----------------REMFDSMPSPSVSS 371
            C                   + S D+  G                R +F+ M   +V +
Sbjct: 518 GCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVIT 577

Query: 372 WNAMLSSYSQSENHKEAIKLFREM-----QFRGVKPDRTTLAIILSSCAAMGILESG 423
           WN ++ +Y      +EA+KLFR M       R ++P+  T   I +S +  G+++ G
Sbjct: 578 WNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEG 634



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 135/262 (51%), Gaps = 5/262 (1%)

Query: 370 SSWNAMLSSYSQSEN-HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
           S W + L S +QS +   +AI  +  M   GV PD      +L + A +  L  GKQ+HA
Sbjct: 50  SEWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHA 109

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI-AGLSLNSLDI 487
              K    +   V + L+ +Y KC   + A RVF  I   D V WNSMI A       ++
Sbjct: 110 HVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWEL 169

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSAL 546
            A   F+ M    + PT F+  +V  +C+ L +    G+QVHA + ++G     F  +AL
Sbjct: 170 -AVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWR-TFTNNAL 227

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           + MY K G +Y A+  FD+   K+ V+WN +I   +QN   +EA+     M+ SGV+P+ 
Sbjct: 228 VTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNG 287

Query: 607 ITFVAILTACSHSGLVDVGVEI 628
           +T  ++L ACSH  ++  G EI
Sbjct: 288 VTLASVLPACSHLEMLGCGKEI 309



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 30/281 (10%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           KD Y  NA++    +   +E A  +F  M  +++VSWN +I+  V  G  + AL++ + M
Sbjct: 423 KDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDM 482

Query: 112 S----------------NEGFV--PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDK 153
                            N+ F   P  +TL +V     AL  +  G+  H   +K  L K
Sbjct: 483 QRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSK 542

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
           ++ V +AL+ +YAKCG    +  VFE+MS  N +T+  ++       +  EAL++FR M+
Sbjct: 543 DVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMV 602

Query: 214 RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
            +  +   +  + V  +           +FA   +    +      + +  K G E    
Sbjct: 603 EEGDNNREIRPNEVTYIA----------IFASLSHSGMVDEGLNLFYTMKAKHGIEPTSD 652

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPE--RSVVSWNVMIAG 312
               L+D+  ++G ++ A  +   +P   + V +W+ ++  
Sbjct: 653 HYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGA 693



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 66/123 (53%), Gaps = 10/123 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA+ ++  L  D  + + L+++Y+KC   + ++ +F++M  +++ +WN ++ A   
Sbjct: 528 GKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGM 587

Query: 67  SDDLEFAYKLFDEMPER---------NVVSWNNLISALVRNGLEEKALSVYNKM-SNEGF 116
               E A KLF  M E          N V++  + ++L  +G+ ++ L+++  M +  G 
Sbjct: 588 HGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGI 647

Query: 117 VPT 119
            PT
Sbjct: 648 EPT 650


>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
          Length = 810

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 210/717 (29%), Positives = 359/717 (50%), Gaps = 58/717 (8%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           KS  L  A ++F +    + V WN  +S  VRNG    A+ ++  M      P   T + 
Sbjct: 116 KSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSG 175

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A  A  ++  GR  HGLV++   + +++V  +L+++YAKCG    A+  F  M   N
Sbjct: 176 ALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRN 235

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T  ++G  + D  V A+ + R M+R  V+I+  + +S+L  CA             
Sbjct: 236 VVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACA------------- 282

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF---SNLPERS 302
              + S      Q+H + +K     D  +  +L+  Y   G ++ +E +F     +  RS
Sbjct: 283 ---QMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRS 339

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE------VTSIN------------- 343
           +  W+  I+G    +   ++++LL+RM   G  P++       +S+N             
Sbjct: 340 I--WSAFISGV-SNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAI 396

Query: 344 -------MLVACV------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                  +LV         R  +++   ++F+ M      SW AM++ ++   +  EA  
Sbjct: 397 KEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFL 456

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            FR M   G KPD  +L  ILS+C     L  GK+VH  +L+       ++    I +YS
Sbjct: 457 TFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGET-TFINDCFISMYS 515

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KCQ  + A R+F   P  D V W+SMI+G + N    EA   F+ M    +    +  ++
Sbjct: 516 KCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSS 575

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +LS CA ++  F  + +H    K G ++D  V S+L+++Y + G++  +R+ FD +   +
Sbjct: 576 ILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPD 635

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V W  +I GYAQ+G    A+ ++  M+  GV+PD +  V++L+ACS +GLV+ G   FN
Sbjct: 636 LVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFN 695

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM+  +GVEP L HY CM+D LGR+G   EA+  +D MP K D ++W  L+++CR+H + 
Sbjct: 696 SMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHDDT 755

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            L  R  E   R    +S  ++ L+NI ++ G W+++  +R+ M    + K+P +S+
Sbjct: 756 VLG-RFVENKIREGNYDSGSFATLSNILANSGDWEEVARIRKTMKG--VNKEPGWSM 809



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 160/584 (27%), Positives = 271/584 (46%), Gaps = 71/584 (12%)

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
           K GL  N YV   ++ L AK G  + A+ VF +    + V + A +SG  +      A+E
Sbjct: 97  KDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVE 156

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           MFR M+  +   +S + S  L  CA    G E  V             G+ VH L ++  
Sbjct: 157 MFRDMVWGSCEPNSFTYSGALSACA---AGEELSV-------------GRAVHGLVLRRD 200

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
            E D+ +  SL++MYAK GDM +A   F  +P R+VVSW   IAG+ Q  +   A+ LL+
Sbjct: 201 PEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLR 260

Query: 328 RMKSCGFEPDEVTSINMLVACVRS-----------------------------------G 352
            M   G   ++ T+ ++L+AC +                                    G
Sbjct: 261 EMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFG 320

Query: 353 DIKTGREMFDSMPSPSVSS-WNAMLSSYSQSENHK--EAIKLFREMQFRGVKPDRTTLAI 409
            I+   ++F+   + S  S W+A +S  S   NH    +++L R M  +G++P+    A 
Sbjct: 321 FIELSEKVFEEAGTVSNRSIWSAFISGVS---NHSLLRSVQLLRRMFHQGLRPNDKCYAS 377

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           + SS  +   +E G Q+H++++K        V S L  +YS+C   + + +VF  + E D
Sbjct: 378 VFSSVNS---IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERD 434

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
            V W +M+AG + +   +EAF+ F+ M  +   P   S   +LS+C +     +G++VH 
Sbjct: 435 GVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHG 494

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
              +  Y    F+    I MY KC  +  AR+ FD    K+ V W+ MI GYA NG G+E
Sbjct: 495 HTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEE 553

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF----NSMQLDHGVEPILDHY 645
           A+ L++ M+A+ ++ D     +IL+ C+     D+    +    +   +  G+       
Sbjct: 554 AISLFQLMVAASIRIDSYICSSILSLCA-----DIARPFYCKPLHGYAIKAGILSDQSVS 608

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           + ++    R+G+  ++  + DE+    D V W  ++     H +
Sbjct: 609 SSLVKVYSRSGNMDDSRKVFDEISVP-DLVAWTTIIDGYAQHGS 651



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 218/462 (47%), Gaps = 43/462 (9%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +QV+C   K G   + ++   ++D+ AK+G +  A  +F++    S V WN  ++G  + 
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------------- 360
            +   A+E+ + M     EP+  T    L AC    ++  GR +                
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208

Query: 361 -------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                              F  MP  +V SW   ++ + Q +    A+ L REM   GV 
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            ++ T   IL +CA M ++    Q+H   LKT  ++D  V   LI  Y+     EL+E+V
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKV 328

Query: 462 FHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           F     + +   W++ I+G+S +SL + +    ++M    + P    +A+V SS   ++S
Sbjct: 329 FEEAGTVSNRSIWSAFISGVSNHSL-LRSVQLLRRMFHQGLRPNDKCYASVFSS---VNS 384

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G Q+H+   K+G+++ I VGSAL  MY +C ++  + + F+ M  ++ V+W  M+ G
Sbjct: 385 IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAG 444

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           +A +G+  EA   +++MI  G KPD ++  AIL+AC+ S  +  G E+       +G   
Sbjct: 445 FATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETT 504

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            ++   C I    +      A  + D  PCKD  V+W  ++S
Sbjct: 505 FIND--CFISMYSKCQGVQTARRIFDATPCKDQ-VMWSSMIS 543



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 137/566 (24%), Positives = 246/566 (43%), Gaps = 57/566 (10%)

Query: 50  PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN 109
           P  D++   ++++   K  D+  A + F  MP RNVVSW   I+  V++     A+ +  
Sbjct: 201 PEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLR 260

Query: 110 KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           +M   G      T  S+  A   +  V    + HG+V+K  +  +  V  AL+S Y   G
Sbjct: 261 EMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFG 320

Query: 170 WTKHAVPVFEEMSE-PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           + + +  VFEE     N   ++A +SG++    ++ ++++ R M  + +  +    +SV 
Sbjct: 321 FIELSEKVFEEAGTVSNRSIWSAFISGVSN-HSLLRSVQLLRRMFHQGLRPNDKCYASVF 379

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
                    V S  F            G Q+H   IK GF   + + ++L  MY++  ++
Sbjct: 380 S-------SVNSIEF------------GGQLHSSAIKEGFIHGILVGSALSTMYSRCDNV 420

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
             +  +F  + ER  VSW  M+AG+     S +A    + M   GF+PD V+   +L AC
Sbjct: 421 QDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSAC 480

Query: 349 VRS----------------------------------GDIKTGREMFDSMPSPSVSSWNA 374
            RS                                    ++T R +FD+ P      W++
Sbjct: 481 NRSECLLKGKEVHGHTLRVYGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSS 540

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+S Y+ +   +EAI LF+ M    ++ D    + ILS CA +      K +H  ++K  
Sbjct: 541 MISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAG 600

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V+S L+ +YS+    + + +VF  I   D+V W ++I G + +     A   F 
Sbjct: 601 ILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFD 660

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKC 553
            M Q  + P      +VLS+C++     QG      +    G   ++     ++++  + 
Sbjct: 661 LMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRS 720

Query: 554 GDIYGARQFFDMMHGK-NTVTWNEMI 578
           G +  A+ F D M  K + + W+ ++
Sbjct: 721 GRLAEAKYFVDSMPMKPDLMVWSTLV 746



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 135/292 (46%), Gaps = 16/292 (5%)

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           +QV+ A+ K     + YV +G++ + +K  R   A RVF        VCWN+ ++G   N
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
                A   F+ M      P  F+++  LS+CA       GR VH  + +     D+FVG
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           ++L+ MY KCGD+  A + F  M  +N V+W   I G+ Q+     A+ L ++M+ +GV 
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268

Query: 604 PDDITFVAILTACSHSGLVDVGVEIF-----NSMQLDHGV-EPILDHYTCMIDCLGRAGH 657
            +  T  +IL AC+   +V    +I        M LD  V E ++  YT         G 
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYT-------NFGF 321

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA---NVRLAKRAAEELFRLDPK 706
              +E + +E     +  IW   +S    H+   +V+L +R   +  R + K
Sbjct: 322 IELSEKVFEEAGTVSNRSIWSAFISGVSNHSLLRSVQLLRRMFHQGLRPNDK 373



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 13/197 (6%)

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
           L  L  E   F +        P+QFS+   L++CA+  +     QV+    KDG   + +
Sbjct: 46  LARLPAELVSFARARAAGRAAPSQFSYGNALAACARAPAPALAEQVYCAAWKDGLSGNAY 105

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           V + ++++  K G +  A + F      + V WN  + G  +NG G  AV +++DM+   
Sbjct: 106 VCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGS 165

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV----EPILDHY--TCMIDCLGRA 655
            +P+  T+   L+AC+    + VG  +       HG+    +P  D +  T +++   + 
Sbjct: 166 CEPNSFTYSGALSACAAGEELSVGRAV-------HGLVLRRDPEYDVFVGTSLVNMYAKC 218

Query: 656 GHFHEAEMLIDEMPCKD 672
           G    A      MP ++
Sbjct: 219 GDMGAAMREFWRMPVRN 235



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 4/108 (3%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LH + ++ G+  D  + + L+++YS+  N   ++ +FD++   D+ +W  I+    + 
Sbjct: 590 KPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQH 649

Query: 68  DDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
              + A  +FD M +  V    V   +++SA  RNGL E+  + +N M
Sbjct: 650 GSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSM 697


>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
          Length = 810

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 210/717 (29%), Positives = 359/717 (50%), Gaps = 58/717 (8%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           KS  L  A ++F +    + V WN  +S  VRNG    A+ ++  M      P   T + 
Sbjct: 116 KSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSG 175

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A  A  ++  GR  HGLV++   + +++V  +L+++YAKCG    A+  F  M   N
Sbjct: 176 ALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRN 235

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T  ++G  + D  V A+ + R M+R  V+I+  + +S+L  CA             
Sbjct: 236 VVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACA------------- 282

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF---SNLPERS 302
              + S      Q+H + +K     D  +  +L+  Y   G ++ +E +F     +  RS
Sbjct: 283 ---QMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRS 339

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE------VTSIN------------- 343
           +  W+  I+G    +   ++++LL+RM   G  P++       +S+N             
Sbjct: 340 I--WSAFISGV-SNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAI 396

Query: 344 -------MLVACV------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                  +LV         R  +++   ++F+ M      SW AM++ ++   +  EA  
Sbjct: 397 KEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFL 456

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            FR M   G KPD  +L  ILS+C     L  GK+VH  +L+       ++    I +YS
Sbjct: 457 TFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGET-TFINDCFISMYS 515

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KCQ  + A R+F   P  D V W+SMI+G + N    EA   F+ M    +    +  ++
Sbjct: 516 KCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSS 575

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +LS CA ++  F  + +H    K G ++D  V S+L+++Y + G++  +R+ FD +   +
Sbjct: 576 ILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPD 635

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V W  +I GYAQ+G    A+ ++  M+  GV+PD +  V++L+ACS +GLV+ G   FN
Sbjct: 636 LVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFN 695

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           SM+  +GVEP L HY CM+D LGR+G   EA+  +D MP K D ++W  L+++CR+H + 
Sbjct: 696 SMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHDDT 755

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            L  R  E   R    +S  ++ L+NI ++ G W+++  +R+ M    + K+P +S+
Sbjct: 756 VLG-RFVENKIREGNYDSGSFATLSNILANSGDWEEVARIRKTMKG--VNKEPGWSM 809



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 160/584 (27%), Positives = 271/584 (46%), Gaps = 71/584 (12%)

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
           K GL  N YV   ++ L AK G  + A+ VF +    + V + A +SG  +      A+E
Sbjct: 97  KDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVE 156

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           MFR M+  +   +S + S  L  CA    G E  V             G+ VH L ++  
Sbjct: 157 MFRDMVWGSCEPNSFTYSGALSACA---AGEELSV-------------GRAVHGLVLRRD 200

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
            E D+ +  SL++MYAK GDM +A   F  +P R+VVSW   IAG+ Q  +   A+ LL+
Sbjct: 201 PEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLR 260

Query: 328 RMKSCGFEPDEVTSINMLVACVRS-----------------------------------G 352
            M   G   ++ T+ ++L+AC +                                    G
Sbjct: 261 EMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFG 320

Query: 353 DIKTGREMFDSMPSPSVSS-WNAMLSSYSQSENHK--EAIKLFREMQFRGVKPDRTTLAI 409
            I+   ++F+   + S  S W+A +S  S   NH    +++L R M  +G++P+    A 
Sbjct: 321 FIELSEKVFEEAGTVSNRSIWSAFISGVS---NHSLLRSVQLLRRMFHQGLRPNDKCYAS 377

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           + SS  +   +E G Q+H++++K        V S L  +YS+C   + + +VF  + E D
Sbjct: 378 VFSSVNS---IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERD 434

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
            V W +M+AG + +   +EAF+ F+ M  +   P   S   +LS+C +     +G++VH 
Sbjct: 435 GVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHG 494

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
              +  Y    F+    I MY KC  +  AR+ FD    K+ V W+ MI GYA NG G+E
Sbjct: 495 HTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEE 553

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF----NSMQLDHGVEPILDHY 645
           A+ L++ M+A+ ++ D     +IL+ C+     D+    +    +   +  G+       
Sbjct: 554 AISLFQLMVAASIRIDSYICSSILSLCA-----DIARPFYCKPLHGYAIKAGILSDQSVS 608

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           + ++    R+G+  ++  + DE+    D V W  ++     H +
Sbjct: 609 SSLVKVYSRSGNMDDSRKVFDEISVP-DLVAWTTIIDGYAQHGS 651



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 218/462 (47%), Gaps = 43/462 (9%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +QV+C   K G   + ++   ++D+ AK+G +  A  +F++    S V WN  ++G  + 
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------------- 360
            +   A+E+ + M     EP+  T    L AC    ++  GR +                
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208

Query: 361 -------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                              F  MP  +V SW   ++ + Q +    A+ L REM   GV 
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            ++ T   IL +CA M ++    Q+H   LKT  ++D  V   LI  Y+     EL+E+V
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKV 328

Query: 462 FHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           F     + +   W++ I+G+S +SL + +    ++M    + P    +A+V SS   ++S
Sbjct: 329 FEEAGTVSNRSIWSAFISGVSNHSL-LRSVQLLRRMFHQGLRPNDKCYASVFSS---VNS 384

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G Q+H+   K+G+++ I VGSAL  MY +C ++  + + F+ M  ++ V+W  M+ G
Sbjct: 385 IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAG 444

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           +A +G+  EA   +++MI  G KPD ++  AIL+AC+ S  +  G E+       +G   
Sbjct: 445 FATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETT 504

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            ++   C I    +      A  + D  PCKD  V+W  ++S
Sbjct: 505 FIND--CFISMYSKCQGVQTARRIFDATPCKDQ-VMWSSMIS 543



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 137/566 (24%), Positives = 246/566 (43%), Gaps = 57/566 (10%)

Query: 50  PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN 109
           P  D++   ++++   K  D+  A + F  MP RNVVSW   I+  V++     A+ +  
Sbjct: 201 PEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLR 260

Query: 110 KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           +M   G      T  S+  A   +  V    + HG+V+K  +  +  V  AL+S Y   G
Sbjct: 261 EMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFG 320

Query: 170 WTKHAVPVFEEMSE-PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           + + +  VFEE     N   ++A +SG++    ++ ++++ R M  + +  +    +SV 
Sbjct: 321 FIELSEKVFEEAGTVSNRSIWSAFISGVSN-HSLLRSVQLLRRMFHQGLRPNDKCYASVF 379

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
                    V S  F            G Q+H   IK GF   + + ++L  MY++  ++
Sbjct: 380 S-------SVNSIEF------------GGQLHSSAIKEGFIHGILVGSALSTMYSRCDNV 420

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
             +  +F  + ER  VSW  M+AG+     S +A    + M   GF+PD V+   +L AC
Sbjct: 421 QDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSAC 480

Query: 349 VRS----------------------------------GDIKTGREMFDSMPSPSVSSWNA 374
            RS                                    ++T R +FD+ P      W++
Sbjct: 481 NRSECLLKGKEVHGHTLRVYGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSS 540

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+S Y+ +   +EAI LF+ M    ++ D    + ILS CA +      K +H  ++K  
Sbjct: 541 MISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAG 600

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V+S L+ +YS+    + + +VF  I   D+V W ++I G + +     A   F 
Sbjct: 601 ILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFD 660

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKC 553
            M Q  + P      +VLS+C++     QG      +    G   ++     ++++  + 
Sbjct: 661 LMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRS 720

Query: 554 GDIYGARQFFDMMHGK-NTVTWNEMI 578
           G +  A+ F D M  K + + W+ ++
Sbjct: 721 GRLAEAKYFVDSMPMKPDLMVWSTLV 746



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 135/292 (46%), Gaps = 16/292 (5%)

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           +QV+ A+ K     + YV +G++ + +K  R   A RVF        VCWN+ ++G   N
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
                A   F+ M      P  F+++  LS+CA       GR VH  + +     D+FVG
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           ++L+ MY KCGD+  A + F  M  +N V+W   I G+ Q+     A+ L ++M+ +GV 
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268

Query: 604 PDDITFVAILTACSHSGLVDVGVEIF-----NSMQLDHGV-EPILDHYTCMIDCLGRAGH 657
            +  T  +IL AC+   +V    +I        M LD  V E ++  YT         G 
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYT-------NFGF 321

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA---NVRLAKRAAEELFRLDPK 706
              +E + +E     +  IW   +S    H+   +V+L +R   +  R + K
Sbjct: 322 IELSEKVFEEAGTVSNRSIWSAFISGVSNHSLLRSVQLLRRMFHQGLRPNDK 373



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 13/197 (6%)

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
           L  L  E   F +        P+QFS+   L++CA+  +     QV+    KDG   + +
Sbjct: 46  LARLPAELVSFARARAAGRAAPSQFSYGNALAACARAPAPALAEQVYCAAWKDGLSGNAY 105

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           V + ++++  K G +  A + F      + V WN  + G  +NG G  AV +++DM+   
Sbjct: 106 VCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGS 165

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV----EPILDHY--TCMIDCLGRA 655
            +P+  T+   L+AC+    + VG  +       HG+    +P  D +  T +++   + 
Sbjct: 166 CEPNSFTYSGALSACAAGEELSVGRAV-------HGLVLRRDPEYDVFVGTSLVNMYAKC 218

Query: 656 GHFHEAEMLIDEMPCKD 672
           G    A      MP ++
Sbjct: 219 GDMGAAMREFWRMPVRN 235



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 4/108 (3%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LH + ++ G+  D  + + L+++YS+  N   ++ +FD++   D+ +W  I+    + 
Sbjct: 590 KPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQH 649

Query: 68  DDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
              + A  +FD M +  V    V   +++SA  RNGL E+  + +N M
Sbjct: 650 GSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSM 697


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 195/517 (37%), Positives = 289/517 (55%), Gaps = 39/517 (7%)

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           E ++   N ++  YAK+  +  A  +F  +P+   VS+N +I+GY    ++  A+ L +R
Sbjct: 71  EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130

Query: 329 MKSCGFEPDEVTSINMLVACVRSGD---------IKTGREMFDSMPSPSVS--------- 370
           M+  GFE D  T   ++ AC    D         +  G + + S+ +  V+         
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190

Query: 371 ----------------SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                           SWN+M+ +Y Q +   +A+ L++EM F+G K D  TLA +L++ 
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL---AERVFHRIPELDIV 471
            ++  L  G+Q H   +K   H +++V SGLI  YSKC   +    +E+VF  I   D+V
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310

Query: 472 CWNSMIAGLSLNS-LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA- 529
            WN+MI+G S+N  L  EA   F+QM++    P   SF  V S+C+ LSS  Q +Q+H  
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            I+     N I V +ALI +Y K G++  AR  FD M   N V++N MI GYAQ+G+G E
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+ LY+ M+ SG+ P+ ITFVA+L+AC+H G VD G E FN+M+    +EP  +HY+CMI
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMI 490

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
           D LGRAG   EAE  ID MP K   V W  LL +CR H N+ LA+RAA EL  + P  + 
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAAT 550

Query: 710 PYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           PY +LAN+Y+   +W+++ +VR+ M    I K P  S
Sbjct: 551 PYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCS 587



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 238/518 (45%), Gaps = 65/518 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA  +++ +   T+L N  + LYSKC     A+  F      +++S+N I+ A  K
Sbjct: 27  GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +  A +LFDE+P+ + VS+N LIS          A+ ++ +M   GF     TL+ +
Sbjct: 87  DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
             A    +D+   ++ H   +  G D    V NA ++ Y+K G  + AV VF  M E  +
Sbjct: 147 IAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           EV++ +M+    +     +AL +++ MI K   ID  +L+SVL                 
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL-------------- 250

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS---AEVIFSNLPERS 302
                   + G+Q H   IK GF  + H+ + L+D Y+K G  D    +E +F  +    
Sbjct: 251 --TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308

Query: 303 VVSWNVMIAGYGQKYQ-STKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
           +V WN MI+GY    + S +A++  ++M+  G  PD+ + + +  AC             
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   +SG+++  R +FD MP  +  S+N M+  Y+Q  + 
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHG 428

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---VHAASLKTASHIDNYVA 442
            EA+ L++ M   G+ P++ T   +LS+CA  G ++ G++       + K     ++Y  
Sbjct: 429 TEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY-- 486

Query: 443 SGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           S +I +  +  + E AER    +P +   V W +++  
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 238/533 (44%), Gaps = 96/533 (18%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP----- 176
           T   +   S A  D+  G+  H L +K  +  + Y++N  ++LY+KCG   +A       
Sbjct: 10  TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69

Query: 177 --------------------------VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
                                     +F+E+ +P+ V++  ++SG A       A+ +F+
Sbjct: 70  EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            M +    +D  +LS ++  C         D+              +Q+HC ++  GF++
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCD-----RVDLI-------------KQLHCFSVSGGFDS 171

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
              ++N+ +  Y+K G +  A  +F  + E R  VSWN MI  YGQ  +  KA+ L + M
Sbjct: 172 YSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM 231

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------------------ 359
              GF+ D  T  ++L A      +  GR+                              
Sbjct: 232 IFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC 291

Query: 360 --MFDS------MPSPSVSSWNAMLSSYSQSEN-HKEAIKLFREMQFRGVKPDRTTLAII 410
             M+DS      + SP +  WN M+S YS +E   +EA+K FR+MQ  G +PD  +   +
Sbjct: 292 DGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDN---YVASGLIGIYSKCQRNELAERVFHRIPE 467
            S+C+ +      KQ+H  ++K  SHI +    V + LI +Y K    + A  VF R+PE
Sbjct: 352 TSACSNLSSPSQCKQIHGLAIK--SHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE 409

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
           L+ V +N MI G + +    EA + +++M  + + P + +F  VLS+CA      +G++ 
Sbjct: 410 LNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY 469

Query: 528 HAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMI 578
              +++   +  +    S +I++  + G +  A +F D M  K  +V W  ++
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 184/368 (50%), Gaps = 30/368 (8%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPE-RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
           NA ++   K   L  A  +F  M E R+ VSWN++I A  ++    KAL++Y +M  +GF
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGF 236

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK---H 173
                TLASV  A T+L  +  GR+ HG +IK G  +N +V + L+  Y+KCG       
Sbjct: 237 KIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD 296

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE-ALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +  VF+E+  P+ V +  M+SG +  + + E A++ FR M R     D  S      VC 
Sbjct: 297 SEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSF-----VCV 351

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD-LHLSNSLLDMYAKNGDMDSA 291
              C           +  S     +Q+H L IK    ++ + ++N+L+ +Y K+G++  A
Sbjct: 352 TSAC-----------SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDA 400

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
             +F  +PE + VS+N MI GY Q    T+A+ L QRM   G  P+++T + +L AC   
Sbjct: 401 RWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHC 460

Query: 352 GDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
           G +  G+E F++M       P    ++ M+    ++   +EA +    M +   KP    
Sbjct: 461 GKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPY---KPGSVA 517

Query: 407 LAIILSSC 414
            A +L +C
Sbjct: 518 WAALLGAC 525



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 189/419 (45%), Gaps = 42/419 (10%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ +H L +K    +  +LSN  +++Y+K G +  A   F +  E +V S+NV++  Y  
Sbjct: 27  GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYA- 85

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                             +   I   R++FD +P P   S+N +
Sbjct: 86  ----------------------------------KDSKIHIARQLFDEIPQPDTVSYNTL 111

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +S Y+ +     A+ LF+ M+  G + D  TL+ ++++C     ++  KQ+H  S+    
Sbjct: 112 ISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGF 169

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFK 494
              + V +  +  YSK      A  VF+ + EL D V WNSMI     +    +A   +K
Sbjct: 170 DSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYK 229

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           +M         F+ A+VL++   L     GRQ H ++ K G+  +  VGS LI+ Y KCG
Sbjct: 230 EMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG 289

Query: 555 ---DIYGARQFFDMMHGKNTVTWNEMIHGYAQN-GYGDEAVRLYKDMIASGVKPDDITFV 610
               +Y + + F  +   + V WN MI GY+ N    +EAV+ ++ M   G +PDD +FV
Sbjct: 290 GCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFV 349

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
            + +ACS+        +I       H     +     +I    ++G+  +A  + D MP
Sbjct: 350 CVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 137/315 (43%), Gaps = 54/315 (17%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSK---CNNTHSAQHLFDKMPHKDIYSWNAIL 61
           + G+  H  +++ G   ++ + + LI+ YSK   C+  + ++ +F ++   D+  WN ++
Sbjct: 257 IGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMI 316

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           S           Y + +E                    L E+A+  + +M   G  P   
Sbjct: 317 S----------GYSMNEE--------------------LSEEAVKSFRQMQRIGHRPDDC 346

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEE 180
           +   V  A + L      ++ HGL IK  +  N I V NAL+SLY K G  + A  VF+ 
Sbjct: 347 SFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDR 406

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M E N V+F  M+ G A+     EAL +++ M+   ++ + ++  +VL  CA   CG   
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAH--CG--- 461

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGF--EADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                        V   Q +  T+K  F  E +    + ++D+  + G ++ AE     +
Sbjct: 462 ------------KVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM 509

Query: 299 PER-SVVSWNVMIAG 312
           P +   V+W  ++  
Sbjct: 510 PYKPGSVAWAALLGA 524



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 148/350 (42%), Gaps = 58/350 (16%)

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR--------- 454
           +T   ++L S A   +  +GK +HA  +K+      Y+++  + +YSKC R         
Sbjct: 9   KTFRDLLLKSVAERDLF-TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67

Query: 455 ----------------------NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                                   +A ++F  IP+ D V +N++I+G +       A + 
Sbjct: 68  STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           FK+MR+       F+ + ++++C         +Q+H      G+ +   V +A +  Y K
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSK 185

Query: 553 CGDIYGARQ-FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
            G +  A   F+ M   ++ V+WN MI  Y Q+  G +A+ LYK+MI  G K D  T  +
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245

Query: 612 ILTACS-----------HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           +L A +           H  L+  G       Q  H    ++D Y+    C G     ++
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFH-----QNSHVGSGLIDFYSKCGGCDG----MYD 296

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
           +E +  E+    D V+W  ++S   +  N  L++ A +   ++      P
Sbjct: 297 SEKVFQEI-LSPDLVVWNTMISGYSM--NEELSEEAVKSFRQMQRIGHRP 343


>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
 gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 198/644 (30%), Positives = 335/644 (52%), Gaps = 56/644 (8%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           GR  HG +I+ G    I  AN L++ YAKCG    A  +F  +   + V++ ++++G ++
Sbjct: 33  GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92

Query: 199 TDRVVEA---LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
              +  +   +++FR M  + +  ++ +L+ +                 ++++    +  
Sbjct: 93  NGGISSSYTVMQLFREMRAQDILPNAYTLAGIF----------------KAESSLQSSTV 136

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY-- 313
           G+Q H L +K+    D+++  SL+ MY K G ++    +F+ +PER+  +W+ M++GY  
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196

Query: 314 -GQKYQSTKAIELLQRMKSCGFEPDEVTS--INMLVACVRSG--------DIKTGR---- 358
            G+  ++ K   L  R K  G + D V +  ++ L A +  G         IK G     
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256

Query: 359 --------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                               +MFDS    +  +W+AM++ YSQ+    EA+KLF  M   
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G+KP   T+  +L++C+ +  LE GKQ+H+  LK       +  + L+ +Y+K      A
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            + F  + E D+  W S+I+G   NS + EA + +++M+   + P   + A+VL +C+ L
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           ++   G+QVH    K G+  ++ +GSAL  MY KCG +      F     K+ V+WN MI
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMI 496

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            G + NG GDEA+ L+++M+A G++PDD+TFV I++ACSH G V+ G   FN M    G+
Sbjct: 497 SGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGL 556

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
           +P +DHY CM+D L RAG   EA+  I+         +W +LLS+C+ H    L   A E
Sbjct: 557 DPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGE 616

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           +L  L  + S+ Y  L+ IY++LGR  D+  V + M  N + K+
Sbjct: 617 KLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKE 660



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 166/603 (27%), Positives = 292/603 (48%), Gaps = 92/603 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           VAG+ +H  I+R G        N L+  Y+KC     A  +F+ +  KD+ SWN++++  
Sbjct: 31  VAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGY 90

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            ++  +  +Y +                            + ++ +M  +  +P   TLA
Sbjct: 91  SQNGGISSSYTV----------------------------MQLFREMRAQDILPNAYTLA 122

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            +FKA ++L     GR+ H LV+K+    +IYV  +L+ +Y K G  +  + VF  M E 
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD-VF 243
           N  T++ M+SG A   RV EA+++F L +R+                     G +SD VF
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE------------------GSDSDYVF 224

Query: 244 AQSDNKFSRNVH---GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
               +  +  ++   G+Q+HC+TIK G    + LSN+L+ MY+K   ++ A  +F +  +
Sbjct: 225 TAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGD 284

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------ 348
           R+ ++W+ M+ GY Q  +S +A++L  RM S G +P E T + +L AC            
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   ++G +   R+ FD +    V+ W +++S Y Q+ ++
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 404

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +EA+ L+R M+  G+ P+  T+A +L +C+++  LE GKQVH  ++K    ++  + S L
Sbjct: 405 EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSAL 464

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
             +YSKC   E    VF R P  D+V WN+MI+GLS N    EA   F++M    M P  
Sbjct: 465 STMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524

Query: 506 FSFATVLSSCAKLSSSFQG----RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            +F  ++S+C+      +G      +  QI  D  V+     + ++++  + G +  A++
Sbjct: 525 VTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHY---ACMVDLLSRAGQLKEAKE 581

Query: 562 FFD 564
           F +
Sbjct: 582 FIE 584



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 211/457 (46%), Gaps = 80/457 (17%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           ++   G+  HA +++   F D ++   L+ +Y K         +F  MP ++ Y+W+ ++
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           S       +E A K+F            NL        L EK      + S+  +V T  
Sbjct: 192 SGYATRGRVEEAIKVF------------NLF-------LREK-----EEGSDSDYVFT-- 225

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
              +V  +  A + V  GR+ H + IK GL   + ++NAL+++Y+KC     A  +F+  
Sbjct: 226 ---AVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSS 282

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + N +T++AM++G ++    +EA+++F  M    +     ++  VL  C+ + C +E  
Sbjct: 283 GDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACS-DICYLE-- 339

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                         G+Q+H   +KLGFE  L  + +L+DMYAK G +  A   F  L ER
Sbjct: 340 -------------EGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
            V  W  +I+GY Q   + +A+ L +RMK+ G  P++ T  ++L AC             
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G ++ G  +F   P+  V SWNAM+S  S +    
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 506

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           EA++LF EM   G++PD  T   I+S+C+  G +E G
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 218/465 (46%), Gaps = 64/465 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   ++NGL     L N L+ +YSKC + + A  +FD    ++  +W+A       
Sbjct: 240 GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSA------- 292

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +++   +NG   +A+ ++++M + G  P+  T+  V
Sbjct: 293 ------------------------MVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + +  +E G++ H  ++K+G +++++   AL+ +YAK G    A   F+ + E + 
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
             +T+++SG  +     EAL ++R M    +  +  +++SVL  C+              
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS-------------- 434

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+QVH  TIK GF  ++ + ++L  MY+K G ++   ++F   P + VVSW
Sbjct: 435 --SLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSW 492

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N MI+G     Q  +A+EL + M + G EPD+VT +N++ AC   G ++ G   F+ M  
Sbjct: 493 NAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSD 552

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P V  +  M+   S++   KEA +         +        I+LS+C   G  E
Sbjct: 553 QIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESAN---IDHGLCLWRILLSACKNHGKCE 609

Query: 422 ----SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
               +G+++ A   + +S    YV   L GIY+   R    ERV+
Sbjct: 610 LGVYAGEKLMALGSRESS---TYVQ--LSGIYTALGRMRDVERVW 649



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 5/234 (2%)

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           + P  +TL   L+  +    L +G+ VH   ++T +      A+ L+  Y+KC +   A 
Sbjct: 10  LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69

Query: 460 RVFHRIPELDIVCWNSMIAGLSLN---SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            +F+ I   D+V WNS+I G S N   S        F++MR  ++ P  ++ A +  + +
Sbjct: 70  SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
            L SS  GRQ HA + K     DI+V ++L+ MYCK G +    + F  M  +NT TW+ 
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVK--PDDITFVAILTACSHSGLVDVGVEI 628
           M+ GYA  G  +EA++++   +    +    D  F A+L++ + +  V +G +I
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 17/239 (7%)

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           Q E+ P   +    L+  ++  +   GR VH QI + G    I   + L+  Y KCG + 
Sbjct: 7   QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA---VRLYKDMIASGVKPDDITFVAILT 614
            A   F+ +  K+ V+WN +I GY+QNG    +   ++L+++M A  + P+  T   I  
Sbjct: 67  KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           A S      VG +   +  L   +    D Y  T ++    +AG   +   +   MP + 
Sbjct: 127 AESSLQSSTVGRQ---AHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ER 182

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS-APY-------SLLANIYSSLGR 723
           +   W  ++S       V  A +      R   + S + Y       SL A IY  LGR
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 212/685 (30%), Positives = 326/685 (47%), Gaps = 127/685 (18%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN------------- 185
            R  H  +I  G     Y+ N L+ +Y K      A  +F+E+ +P+             
Sbjct: 34  ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93

Query: 186 --------------------EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
                                V + AM++G +  +    A+E+FR ++R     D+ + +
Sbjct: 94  AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFT 153

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK- 284
           SVLG  A              D K       QQ+HC  +K G      + N+LL ++ K 
Sbjct: 154 SVLGALA----------LIVEDEK-----QCQQIHCAVVKSGSGFVTSVLNALLSVFVKC 198

Query: 285 --------NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
                   +  M +A  +F  + ER  +SW  MIAGY                       
Sbjct: 199 ASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGY----------------------- 235

Query: 337 DEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                       VR+G++   R+  D M    V +WNAM+S Y       EA+++FR+M 
Sbjct: 236 ------------VRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMY 283

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH----IDNYVASGLIGIYSKC 452
             G++ D  T   +LS+CA  G    GKQVHA  L+T           V + L  +Y KC
Sbjct: 284 LLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKC 343

Query: 453 QRNELAERVFHRIPELDIVCWNS-------------------------------MIAGLS 481
            + + A +VF+++P  D+V WN+                               MI+GL+
Sbjct: 344 GKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLA 403

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N    E+   F +M+     P  ++FA  + +CA L++   GRQ+HAQ+ + G+ + + 
Sbjct: 404 QNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLS 463

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
            G+ALI MY KCG +  A   F  M   ++V+WN MI    Q+G+G +A+ L++ M+   
Sbjct: 464 AGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKED 523

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           + PD ITF+ +L+ CSH+GLV+ G   F SM   +G+ P  DHY  MID L RAG F EA
Sbjct: 524 ILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEA 583

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           + +I+ MP +  P IWE LL+ CR+H N+ L  +AAE LF L P++   Y LL+N+Y+++
Sbjct: 584 KDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATV 643

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           GRWDD+  VR+LM +  + K+P  S
Sbjct: 644 GRWDDVAKVRKLMRDKGVKKEPGCS 668



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 213/453 (47%), Gaps = 44/453 (9%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTH---------SAQHLFDKMPHKDIYSWNAI 60
           +H  ++++G    T + N L+ ++ KC ++          +A+ LFD+M  +D  SW  +
Sbjct: 172 IHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTM 231

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           ++   ++ +L+ A +  D M E+ VV+WN +IS  V +G   +AL ++ KM   G     
Sbjct: 232 IAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDE 291

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKI----GLDKNIYVANALLSLYAKCGWTKHAVP 176
            T  SV  A        HG++ H  +++      LD ++ V NAL +LY KCG    A  
Sbjct: 292 FTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQ 351

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VF +M   + V++ A++SG     R+ EA   F  M  + +   +V +S +    A+ G 
Sbjct: 352 VFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGL----AQNGF 407

Query: 237 GVE---------SDVFAQSDNKFSRNV----------HGQQVHCLTIKLGFEADLHLSNS 277
           G E         S+ F   D  F+  +          HG+Q+H   ++LGF++ L   N+
Sbjct: 408 GEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNA 467

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L+ MYAK G +++A  +F  +P    VSWN MIA  GQ     +A+EL + M      PD
Sbjct: 468 LITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPD 527

Query: 338 EVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLF 392
            +T + +L  C  +G ++ G   F SM       P    +  M+    ++    EA  + 
Sbjct: 528 RITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMI 587

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
             M    V+P       +L+ C   G ++ G Q
Sbjct: 588 ETMP---VEPGPPIWEALLAGCRIHGNMDLGIQ 617



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 228/534 (42%), Gaps = 133/534 (24%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            + +HAH++ +G     ++ NRLI++Y K ++  SA HLFD++   DI +   +++A   
Sbjct: 34  ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93

Query: 67  SDDLEFAYKLFDEMPE--RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
           + +   A ++F   P   R+ V +N +I+    N     A+ ++  +   GF P + T  
Sbjct: 94  AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFT 153

Query: 125 SVFKASTALLDVEHGRRC---HGLVIKIGLDKNIYVANALLSLYAKCGWTKH-------- 173
           SV  A    L VE  ++C   H  V+K G      V NALLS++ KC  +          
Sbjct: 154 SVLGALA--LIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMA 211

Query: 174 -AVPVFEEMSEPNEVTFTAMMSGLAK--------------TDRVV--------------- 203
            A  +F+EM+E +E+++T M++G  +              T+++V               
Sbjct: 212 AARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGF 271

Query: 204 --EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
             EALEMFR M    +  D  + +SVL  CA  G                  +HG+QVH 
Sbjct: 272 FLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGF----------------FLHGKQVHA 315

Query: 262 LTIKLGFEADLHLS-----------------------------------NSLLDMYAKNG 286
             ++      L  S                                   N++L  Y   G
Sbjct: 316 YILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAG 375

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
            +D A+  F  +PER++++W VMI+G  Q     ++++L  RMKS GFEP +      ++
Sbjct: 376 RIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAII 435

Query: 347 ACVRSGDIKTGREM--------FDS---------------------------MPSPSVSS 371
           AC     +  GR++        FDS                           MP     S
Sbjct: 436 ACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVS 495

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           WNAM+++  Q  +  +A++LF  M    + PDR T   +LS+C+  G++E G +
Sbjct: 496 WNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHR 549



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 165/311 (53%), Gaps = 20/311 (6%)

Query: 7   GKLLHAHILRN----GLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           GK +HA+ILR      L     + N L  LY KC     A+ +F++MP KD+ SWNAILS
Sbjct: 310 GKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILS 369

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
               +  ++ A   F+EMPERN+++W  +IS L +NG  E++L ++N+M +EGF P    
Sbjct: 370 GYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYA 429

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            A    A   L  + HGR+ H  ++++G D ++   NAL+++YAKCG  + A  +F  M 
Sbjct: 430 FAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMP 489

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + V++ AM++ L +     +ALE+F LM+++ +  D ++  +VL  C+  G       
Sbjct: 490 YLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAG------- 542

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
             +  +++ +++ G    C         + H +  ++D+  + G    A+ +   +P E 
Sbjct: 543 LVEEGHRYFKSMSGLYGIC-------PGEDHYAR-MIDLLCRAGKFSEAKDMIETMPVEP 594

Query: 302 SVVSWNVMIAG 312
               W  ++AG
Sbjct: 595 GPPIWEALLAG 605


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 194/619 (31%), Positives = 316/619 (51%), Gaps = 61/619 (9%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT--KHAVPVFEEM--SEPNEVTFT 190
           D+   ++ H L+IK GL   ++  + L+   A        +A+ +F  +    PN   + 
Sbjct: 37  DIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWN 96

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
            ++   + T     +L +F  M+   +  +S +  S+   CA+                 
Sbjct: 97  TLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAK----------------- 139

Query: 251 SRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
           S+  H  +Q+H   +KL      H+  SL+ MY++ G++  A ++F     R  VS+  +
Sbjct: 140 SKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTAL 199

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSV 369
           I GY                                   V  G +   R +FD +P+  V
Sbjct: 200 ITGY-----------------------------------VSEGHVDDARRLFDEIPAKDV 224

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
            SWNAM++ Y QS   +EA+  F  MQ   V P+++T+  +LS+C  +  LE GK + + 
Sbjct: 225 VSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSW 284

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
                   +  + + L+ +YSKC     A ++F  + + D++ WN+MI G    SL  EA
Sbjct: 285 VRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEA 344

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD----GYVNDIFVGSA 545
            + F+ M +  + P   +F  VL +CA L +   G+ VHA I+K+    G VN++ + ++
Sbjct: 345 LVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTS 404

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           +I MY KCG +  A Q F  M  ++  +WN MI G A NG+ + A+ L+++MI  G +PD
Sbjct: 405 IIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPD 464

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
           DITFV +L+AC+ +G V++G   F+SM  D+G+ P L HY CMID L R+G F EA++L+
Sbjct: 465 DITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLM 524

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
             M  + D  IW  LL++CR+H  V   +  AE LF L+P+NS  Y LL+NIY+  GRWD
Sbjct: 525 GNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWD 584

Query: 726 DLRAVRELMSENCIVKDPA 744
           D+  +R  +++  + K P 
Sbjct: 585 DVAKIRTKLNDKGMKKVPG 603



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 218/430 (50%), Gaps = 20/430 (4%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA    K LHAH L+  L     +   LI +YS+      A+ +FDK   +D  S+ A++
Sbjct: 141 KATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALI 200

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +       ++ A +LFDE+P ++VVSWN +I+  V++G  E+AL+ + +M      P   
Sbjct: 201 TGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQS 260

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ SV  A   L  +E G+     V   G  KN+ + NAL+ +Y+KCG    A  +F+ M
Sbjct: 261 TMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGM 320

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + + + +  M+ G        EAL +F +M+R+ V+ + V+  +VL  CA  G     D
Sbjct: 321 EDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGA---LD 377

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           +         +N+ G          G   ++ L  S++ MYAK G ++ AE +F ++  R
Sbjct: 378 LGKWVHAYIDKNLKGT---------GNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSR 428

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
           S+ SWN MI+G      + +A+ L + M + GF+PD++T + +L AC ++G ++ G   F
Sbjct: 429 SLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYF 488

Query: 362 DSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            SM      SP +  +  M+   ++S    EA  L   M+   ++PD      +L++C  
Sbjct: 489 SSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNME---MEPDGAIWGSLLNACRI 545

Query: 417 MGILESGKQV 426
            G +E G+ V
Sbjct: 546 HGQVEFGEYV 555



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 207/478 (43%), Gaps = 93/478 (19%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H+ I+++GL +  F  ++LIE                               A   S
Sbjct: 42  KQIHSLIIKSGLHNTLFAQSKLIEF-----------------------------CALSPS 72

Query: 68  DDLEFAYKLFDEMPER--NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            DL +A  LF  +  +  N+  WN LI A         +L ++++M + G  P   T  S
Sbjct: 73  RDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPS 132

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +FK+          ++ H   +K+ L  + +V  +L+ +Y++ G  +HA  VF++ +  +
Sbjct: 133 LFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRD 192

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-------CGV 238
            V+FTA+++G      V +A  +F  +  K    D VS ++++    + G       C  
Sbjct: 193 AVSFTALITGYVSEGHVDDARRLFDEIPAK----DVVSWNAMIAGYVQSGRFEEALACFT 248

Query: 239 ---ESDVFAQSDNKFS--------RNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
              E+DV        S        R++  G+ +       GF  +L L N+L+DMY+K G
Sbjct: 249 RMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCG 308

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
           ++ +A  +F  + ++ V+ WN MI GY       +A+ L + M      P++VT + +L 
Sbjct: 309 EIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLP 368

Query: 347 ACVRSGDIKTGR---------------------------------------EMFDSMPSP 367
           AC   G +  G+                                       ++F SM S 
Sbjct: 369 ACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSR 428

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           S++SWNAM+S  + + + + A+ LF EM   G +PD  T   +LS+C   G +E G +
Sbjct: 429 SLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHR 486


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 191/632 (30%), Positives = 331/632 (52%), Gaps = 61/632 (9%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL- 211
           +N+ ++  L++LY   G    A   F+ +   +   +  M+SG  +     E +  F L 
Sbjct: 84  QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M+   ++ D  +  SVL  C                      + G ++HCL +K GF  D
Sbjct: 144 MLSSGLTPDYRTFPSVLKAC-------------------RTVIDGNKIHCLALKFGFMWD 184

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           ++++ SL+ +Y++   + +A ++F  +P R + SWN MI+GY Q   + +A+ L   +++
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA 244

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTG---------------------------------- 357
                D VT +++L AC  +GD   G                                  
Sbjct: 245 M----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRD 300

Query: 358 -REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            +++FD M    + SWN+++ +Y  +E    AI LF+EM+   ++PD  TL  + S  + 
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360

Query: 417 MGILESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
           +G + + + V   +L+    +++  + + ++ +Y+K    + A  VF+ +P  D++ WN+
Sbjct: 361 LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 420

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           +I+G + N    EA   +  M +  E+   Q ++ +VL +C++  +  QG ++H ++ K+
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G   D+FV ++L +MY KCG +  A   F  +   N+V WN +I  +  +G+G++AV L+
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 540

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           K+M+  GVKPD ITFV +L+ACSHSGLVD G   F  MQ D+G+ P L HY CM+D  GR
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 600

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           AG    A   I  M  + D  IW  LLS+CR+H NV L K A+E LF ++P++   + LL
Sbjct: 601 AGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLL 660

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +N+Y+S G+W+ +  +R +     + K P +S
Sbjct: 661 SNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 172/643 (26%), Positives = 299/643 (46%), Gaps = 112/643 (17%)

Query: 32  LYSKCNNTHSAQHLFDKMP-HKDIYSWNAILSAQ-----CKSDDLEFAYKLFDEMPERNV 85
           L+  C N  SA+ L  ++   K I   N  +SA+     C   ++  A   FD +  R+V
Sbjct: 60  LFRYCTNLQSAKCLHARLVVSKQIQ--NVCISAKLVNLYCYLGNVALARHTFDHIQNRDV 117

Query: 86  VSWNNLISALVRNGLEEKALSVYNK-MSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
            +WN +IS   R G   + +  ++  M + G  P + T  SV KA   ++D   G + H 
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
           L +K G   ++YVA +L+ LY++     +A  +F+EM   +  ++ AM+SG  ++    E
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           AL +   +     ++DSV++ S+L  C   G              F+R V    +H  +I
Sbjct: 235 ALTLSNGL----RAMDSVTVVSLLSACTEAG-------------DFNRGV---TIHSYSI 274

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           K G E++L +SN L+D+YA+ G +   + +F  +  R ++SWN +I  Y    Q  +AI 
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIK----------------------------- 355
           L Q M+    +PD +T I++     + GDI+                             
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394

Query: 356 -------TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG-VKPDRTTL 407
                  + R +F+ +P+  V SWN ++S Y+Q+    EAI+++  M+  G +  ++ T 
Sbjct: 395 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
             +L +C+  G L  G ++H   LK   ++D +V + L  +Y KC R E A  +F++IP 
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
           ++ V WN++IA    +    +A M FK+M    + P   +F T+LS+C+           
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS----------- 563

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT-----WNEMIHGYA 582
           H+ +  +G              +C           F+MM     +T     +  M+  Y 
Sbjct: 564 HSGLVDEG-------------QWC-----------FEMMQTDYGITPSLKHYGCMVDMYG 599

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           + G  + A++  K M    ++PD   + A+L+AC   G VD+G
Sbjct: 600 RAGQLETALKFIKSM---SLQPDASIWGALLSACRVHGNVDLG 639



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 215/457 (47%), Gaps = 88/457 (19%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G  +H   L+ G   D ++   LI LYS+     +A+ LFD+MP +D+ SWNA++S  
Sbjct: 167 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
           C+S + + A  L                     NGL  +A+               +T+ 
Sbjct: 227 CQSGNAKEALTL--------------------SNGL--RAMD-------------SVTVV 251

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  A T   D   G   H   IK GL+  ++V+N L+ LYA+ G  +    VF+ M   
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + +++ +++      ++ + A+ +F+ M    +  D ++L S+  + ++ G         
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG--------- 362

Query: 245 QSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
             D +  R+V G      T++ G F  D+ + N+++ MYAK G +DSA  +F+ LP   V
Sbjct: 363 --DIRACRSVQG-----FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDV 415

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGRE--- 359
           +SWN +I+GY Q   +++AIE+   M+  G    ++ T +++L AC ++G ++ G +   
Sbjct: 416 ISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHG 475

Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                           +F  +P  +   WN +++ +    + ++
Sbjct: 476 RLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEK 535

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           A+ LF+EM   GVKPD  T   +LS+C+  G+++ G+
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ 572



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 154/320 (48%), Gaps = 22/320 (6%)

Query: 420 LESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
           L+S K +HA  L  +  I N  +++ L+ +Y       LA   F  I   D+  WN MI+
Sbjct: 67  LQSAKCLHA-RLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125

Query: 479 GLSL---NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           G      +S  I  F  F  M  + + P   +F +VL +C  +     G ++H    K G
Sbjct: 126 GYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCLALKFG 180

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
           ++ D++V ++LI +Y +   +  AR  FD M  ++  +WN MI GY Q+G   EA+ L  
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
            + A     D +T V++L+AC+ +G  + GV I +S  + HG+E  L     +ID     
Sbjct: 241 GLRAM----DSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYAEF 295

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE--LFRLDPKNSAPYSL 713
           G   + + + D M  + D + W  ++ +  L+     A    +E  L R+ P      S 
Sbjct: 296 GRLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS- 353

Query: 714 LANIYSSLGRWDDLRAVREL 733
           LA+I S LG   D+RA R +
Sbjct: 354 LASILSQLG---DIRACRSV 370



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/395 (20%), Positives = 154/395 (38%), Gaps = 86/395 (21%)

Query: 6   AGKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           A + +    LR G F +D  + N ++ +Y+K     SA+ +F+ +P+ D+ SWN I    
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI---- 421

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI-TL 123
                                      IS   +NG   +A+ +YN M  EG +  +  T 
Sbjct: 422 ---------------------------ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            SV  A +    +  G + HG ++K GL  +++V  +L  +Y KCG  + A+ +F ++  
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V +  +++         +A+ +F+ M+ + V  D ++  ++L  C+  G   E    
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE---- 570

Query: 244 AQSDNKFSRNVHGQQ-VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                       GQ     +    G    L     ++DMY + G +++A           
Sbjct: 571 ------------GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA----------- 607

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
                                  L+ +KS   +PD      +L AC   G++  G+   +
Sbjct: 608 -----------------------LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 644

Query: 363 SM--PSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
            +    P    ++ +LS+   S    E +   R +
Sbjct: 645 HLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 53/279 (18%)

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           T+   C  L S+   + +HA++     + ++ + + L+ +YC  G++  AR  FD +  +
Sbjct: 59  TLFRYCTNLQSA---KCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYK-DMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           +   WN MI GY + G   E +R +   M++SG+ PD  TF ++L AC    ++D G +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC--RTVID-GNKI 172

Query: 629 FNSMQLDHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
            + + L  G   + D Y    +I    R      A +L DEMP +D    W  ++S    
Sbjct: 173 -HCLALKFGF--MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMISGYCQ 228

Query: 687 HANVRLAKRAAEELFRLDPKNSA-------------------PYSL-------------L 714
             N + A   +  L  +D                         YS+             L
Sbjct: 229 SGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288

Query: 715 ANIYSSLGRWDDLRA------VRELMSENCIVKDPAYSL 747
            ++Y+  GR  D +       VR+L+S N I+K  AY L
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK--AYEL 325


>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 228/706 (32%), Positives = 363/706 (51%), Gaps = 38/706 (5%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           ++  N  ++   KS  ++ A K+F  M  +N V+ N++ISA  +NG    A  +++ M  
Sbjct: 15  VFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQ 74

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
              V  +  +A+          VE  R+   L  K+   +++Y    +++ Y + G    
Sbjct: 75  RNIVSWNSMIAAYLHNDR----VEEARQ---LFDKMP-TRDLYSWTLMITCYTRNGELAK 126

Query: 174 AVPVFEEMS-EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           A  +F  +  + N V   AM++G AK  +  EA  +F  M  K    D VS +S+L    
Sbjct: 127 ARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAK----DLVSWNSMLTGYT 182

Query: 233 REG---CGVE-SDVFAQSD-NKFSRNVHG-QQVHCLTIKLGFEADLHLSN-----SLLDM 281
           R G    G++  +  A+ D   ++  V G  +V  L     F   +   N     ++L  
Sbjct: 183 RNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCG 242

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           +A+ G +  A  +F  +P R+VV+WN MIA Y Q     +AI L   M     E + ++ 
Sbjct: 243 FARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP----EKNSISW 298

Query: 342 INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
             ++   VR G +   R++ + MP  +V++  AM+S Y Q++   +A ++F ++  R V 
Sbjct: 299 TTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVV 358

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASL-KTASHIDNYVASGLIGIYSKCQRNELAER 460
              T +A         G  + G+   A  L K     D    + ++  Y++  + + A +
Sbjct: 359 CWNTMIA---------GYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIK 409

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           +F  + E +IV WNS+I+GL+ N   ++A   F  M      P Q +FA  LSSCA L++
Sbjct: 410 IFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAA 469

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G+Q+H  + K GY  D+FV +ALI MY KCG I  A   F  +   + V+WN +I  
Sbjct: 470 LQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAA 529

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           YA NG G EA++L+  M   GV PD++TFV IL+ACSH GL+D G+++F  M   + +EP
Sbjct: 530 YALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEP 589

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
           + +HY CM+D LGRAG   EA  L+  M    +  IW  LL +CR+H N+ LAK AAE+L
Sbjct: 590 LAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKL 649

Query: 701 FRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
              +P  ++ Y LL+N+ +  GRWD++  VR LM E    K P +S
Sbjct: 650 LEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWS 695



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 266/542 (49%), Gaps = 51/542 (9%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           +T   N +I  ++K      A+ LFD MP ++I SWN++++A   +D +E A +LFD+MP
Sbjct: 45  NTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMP 104

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
            R++ SW  +I+   RNG   KA +++N +    +    +   ++          +  RR
Sbjct: 105 TRDLYSWTLMITCYTRNGELAKARNLFNLLP---YKWNPVCCNAMVAGYAKNRQFDEARR 161

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE------------------ 183
               +      K++   N++L+ Y + G  +  +  FEEM+E                  
Sbjct: 162 LFDAMPA----KDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGD 217

Query: 184 -------------PNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLG 229
                        PN V++  M+ G A+  ++ EA  +F  M IR  V+ +++  + V  
Sbjct: 218 LNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQN 277

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHG-------QQVHCLTIKLGFEADLHLSNSLLDMY 282
               E   +  ++  ++   ++  ++G        +   L  ++ +  ++    +++  Y
Sbjct: 278 CHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYR-NVAAQTAMISGY 336

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
            +N  MD A  IF+ +  R VV WN MIAGY Q  +  +A+ L ++M     + D V+  
Sbjct: 337 VQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQM----VKKDIVSWN 392

Query: 343 NMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
            M+ +  + G +    ++F+ M   ++ SWN+++S  +Q+ ++ +A+K F  M   G KP
Sbjct: 393 TMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKP 452

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D++T A  LSSCA +  L+ GKQ+H   +K+    D +V++ LI +Y+KC     AE +F
Sbjct: 453 DQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLF 512

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             I   D+V WNS+IA  +LN    EA   F +M    + P + +F  +LS+C+ +    
Sbjct: 513 KDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLID 572

Query: 523 QG 524
           QG
Sbjct: 573 QG 574



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 213/448 (47%), Gaps = 53/448 (11%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
           T LC      +++      A+ LFD+MP +++ +WNA+++A  ++  ++ A  LF EMPE
Sbjct: 238 TMLCG-----FARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPE 292

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNE----------GFVPT-----------HI 121
           +N +SW  +I+  VR G  ++A  + N+M             G+V              I
Sbjct: 293 KNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQI 352

Query: 122 TLASVFKASTALLDVEH-GRRCHGL-VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           ++  V   +T +      GR    L + K  + K+I   N +++ YA+ G    A+ +FE
Sbjct: 353 SIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFE 412

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           EM E N V++ +++SGL +    ++AL+ F LM  +    D  + +  L  CA       
Sbjct: 413 EMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAH------ 466

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                      +    G+Q+H L +K G+  DL +SN+L+ MYAK G + SAE++F ++ 
Sbjct: 467 ----------LAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDID 516

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
              VVSWN +IA Y       +A++L  +M+  G  PDEVT + +L AC   G I  G +
Sbjct: 517 HFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLK 576

Query: 360 MFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +F  M       P    +  M+    ++   +EA +L R M+   +  +      +L +C
Sbjct: 577 LFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMK---INANAGIWGALLGAC 633

Query: 415 AAMGILESGKQVHAASLKTASH-IDNYV 441
              G LE  K      L+   H   NYV
Sbjct: 634 RIHGNLELAKFAAEKLLEFEPHKTSNYV 661



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 8/117 (6%)

Query: 3   AHVA----GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           AH+A    GK LH  ++++G   D F+ N LI +Y+KC +  SA+ LF  + H D+ SWN
Sbjct: 465 AHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWN 524

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
           ++++A   + +   A KLF +M    V    V++  ++SA    GL ++ L ++  M
Sbjct: 525 SLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCM 581


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 202/652 (30%), Positives = 343/652 (52%), Gaps = 58/652 (8%)

Query: 136 VEHGRRCHGLVIKIGLDK--NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           ++  +  HG ++K       ++ + N +   Y+KC     A  +F++MS+ N  ++T ++
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           +GLA+    ++  E F  M  + +  D  + S +L +C     G++S             
Sbjct: 144 AGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICI----GLDSIEL---------- 189

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G  VH   +  GF +   +S +LL+MYAK  +++ +  +F+ + E +VVSWN MI G+
Sbjct: 190 --GNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGF 247

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSI-----------------------------NM 344
                   A +L  RM   G  PD  T I                             N 
Sbjct: 248 TSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNT 307

Query: 345 LVACV------RSGDIKTGREMFDS--MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           LV         + G ++  R +F+S  +     + WNAM+S Y +S  +++A++LF +M 
Sbjct: 308 LVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMC 367

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQR 454
              +  D  T   + ++ AA+  L  GK+VHA ++K+   + NYV+  + +   Y+KC  
Sbjct: 368 QNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEV-NYVSISNAVANAYAKCGS 426

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E   +VF+R+ + D++ W S++   S  S   +A   F  MR   + P QF+F++VL S
Sbjct: 427 LEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVS 486

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           CA L     G+QVH  I K G   D  + SAL++MY KCG +  A++ F+ +   +TV+W
Sbjct: 487 CANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSW 546

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
             +I G+AQ+G  D+A++L++ M+  GV+P+ +TF+ +L ACSH GLV+ G++ F  M+ 
Sbjct: 547 TAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKK 606

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
            +G+ P ++HY C++D L R GH ++A   I  MP + + ++W+ LL +CR+H NV L +
Sbjct: 607 TYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGE 666

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA+++     +NSA Y LL+N Y   G + D  ++R LM E  + K+P  S
Sbjct: 667 LAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCS 718



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/627 (24%), Positives = 289/627 (46%), Gaps = 96/627 (15%)

Query: 7   GKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
            K +H  +L++   +     L N +   YSKC++  +A  LFD+M  ++ +SW       
Sbjct: 87  AKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTV----- 141

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     LI+ L  NGL       + +M ++G  P     +
Sbjct: 142 --------------------------LIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYS 175

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            + +    L  +E G   H  ++  G   + +V+ ALL++YAK    + +  VF  M+E 
Sbjct: 176 GILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEV 235

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++ AM++G    D  ++A ++F  M+ + V+ D+    + +GV   +  G+  DV  
Sbjct: 236 NVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDA---QTFIGVA--KAIGMLRDV-- 288

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN--LPERS 302
              NK       ++V    ++LG +++  +  +L+DM +K G +  A  IF++  +  R 
Sbjct: 289 ---NK------AKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRF 339

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRM--------------------------------- 329
              WN MI+GY +   + KA+EL  +M                                 
Sbjct: 340 NAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHA 399

Query: 330 ---KSCGFEPDEVTSINMLV-ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
              KS G E + V+  N +  A  + G ++  R++F+ M    + SW +++++YSQ    
Sbjct: 400 RAIKS-GLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEW 458

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            +AI++F  M+  G+ P++ T + +L SCA + +LE G+QVH    K    +D  + S L
Sbjct: 459 DKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESAL 518

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC     A++VF+RI   D V W ++IAG + + +  +A   F++M Q  + P  
Sbjct: 519 VDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNA 578

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            +F  VL +C+      +G Q    ++K  G V ++   + ++++  + G +  A +F  
Sbjct: 579 VTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFIS 638

Query: 565 MMHGK-NTVTWNEM-----IHGYAQNG 585
            M  + N + W  +     +HG  + G
Sbjct: 639 RMPVEPNEMVWQTLLGACRVHGNVELG 665



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 144/294 (48%), Gaps = 13/294 (4%)

Query: 400 VKPDRT-------TLAIILSSCAAMGILESGKQVHAASLKT--ASHIDNYVASGLIGIYS 450
           VK D+T        L  +L  C     L+  K VH   LK+  ++H    + + +   YS
Sbjct: 57  VKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYS 116

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   + A R+F ++ + +   W  +IAGL+ N L ++ F FF +M+   ++P QF+++ 
Sbjct: 117 KCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSG 176

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +L  C  L S   G  VHAQI   G+ +  FV +AL+ MY K  +I  + + F+ M   N
Sbjct: 177 ILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVN 236

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+WN MI G+  N    +A  L+  M+  GV PD  TF+ +  A      V+   E+ +
Sbjct: 237 VVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV-S 295

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE--MPCKDDPVIWEVLLS 682
              L+ GV+      T +ID   + G   EA  + +   + C+ +   W  ++S
Sbjct: 296 GYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAP-WNAMIS 348



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 169/349 (48%), Gaps = 52/349 (14%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA+ +A  K   LE   K+F+ M +R+++SW +L++A  +    +KA+ +++ M  EG  
Sbjct: 415 NAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIA 474

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T +SV  +   L  +E+G++ HG++ K+GLD +  + +AL+ +YAKCG    A  V
Sbjct: 475 PNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKV 534

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  +S  + V++TA+++G A+   V +AL++FR M++  V  ++V+   VL  C+  G  
Sbjct: 535 FNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGL- 593

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           VE  +              Q    +    G   ++     ++D+ ++ G ++ A    S 
Sbjct: 594 VEEGL--------------QYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISR 639

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +P                                   EP+E+    +L AC   G+++ G
Sbjct: 640 MP----------------------------------VEPNEMVWQTLLGACRVHGNVELG 665

Query: 358 R---EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
               +   S  + + +++  + ++Y +S ++K+ + L   M+ +GVK +
Sbjct: 666 ELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKE 714


>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
          Length = 696

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 211/649 (32%), Positives = 331/649 (51%), Gaps = 59/649 (9%)

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP--VFEEMSEPNEVTFTAMMSGLAK 198
           R H  ++K G        N LL+ Y++      A    VF+E+   +EV++ A+++  A 
Sbjct: 12  RSHASLLKSGFAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAA 70

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
           +    EA  + R M  + ++ ++ +L S L                +S     R   G Q
Sbjct: 71  SGAHPEAWRLLRAMHAQGLASNTFALGSAL----------------RSAAVARRPAIGAQ 114

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +  L +K G   ++  +++LLD+YAK G +  A  +F  +PER+ VSWN +IAGY +   
Sbjct: 115 LQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGD 174

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVAC------------------------------ 348
              A+EL   M+  G  PDE T  ++L A                               
Sbjct: 175 MASALELFLEMEREGLVPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAA 234

Query: 349 ----VRSGDIKTGREMFDSMPS-PSVSSWNAMLSSYSQSENHKEAIKLF-REMQFRGVKP 402
                + G +K  R +FD +     + SWNAML +Y+ +    EA+K F R MQ  GV P
Sbjct: 235 ITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHP 294

Query: 403 DRTTLAIILSSCAAMGILE-SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN---ELA 458
           D  +   I+SSC+  G  +  G+ +H   +K+A      V + LI +Y++   N   E A
Sbjct: 295 DMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDA 354

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            + F+ +   D V WNSM+ G S + L  +A  FF+ M    +   +++F+  L S ++L
Sbjct: 355 YKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSEL 414

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           +    G+Q+H  +   G+ ++ FV S+LI MY K G I  AR+ F+     ++V WN MI
Sbjct: 415 AVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMI 474

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GYAQ+G  +    L+ +M+      D ITFV ++T+CSH+GLVD G EI N+M+  +GV
Sbjct: 475 FGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGV 534

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
              ++HY C +D  GRAG   +A+ LID MP + D ++W  LL +CR+H NV LA   A 
Sbjct: 535 PLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVAS 594

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            LF  +P+  + Y LL+++YS LG W D   V+ +M +  + K P +SL
Sbjct: 595 HLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSL 643



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 152/616 (24%), Positives = 267/616 (43%), Gaps = 95/616 (15%)

Query: 57  WNAILSAQCKS--DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
           WN +L+A  +S  D L  A ++FDE+P R+ VSWN L++A   +G   +A  +   M  +
Sbjct: 28  WNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQ 87

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G       L S  +++        G +   L +K GL  N++ A+ALL +YAKCG  + A
Sbjct: 88  GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             VF+ M E N V++ A+++G  ++  +  ALE+F  M R+ +  D  + +S+L      
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAVEGP 207

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
            C +                   Q+H   +K G    L + N+ +  Y++ G +  +  I
Sbjct: 208 SCFLM-----------------HQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRI 250

Query: 295 FSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQR-MKSCGFEPDEVTSINMLVACVRSG 352
           F  + + R ++SWN M+  Y       +A++   R M+  G  PD  +  +++ +C   G
Sbjct: 251 FDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHG 310

Query: 353 -DIKTGR--------------------------------------EMFDSMPSPSVSSWN 373
            D   GR                                      + F+S+      SWN
Sbjct: 311 HDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWN 370

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           +ML+ YSQ     +A+K FR M    V+ D    +  L S + + +L+ GKQ+H   + +
Sbjct: 371 SMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHS 430

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               +++V+S LI +YSK    + A + F    +   V WN+MI G + +       + F
Sbjct: 431 GFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILF 490

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
            +M Q +      +F  +++SC+      +G ++   +E          G  L   +  C
Sbjct: 491 NEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETK-------YGVPLRMEHYAC 543

Query: 554 G-DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           G D+YG                        + G  D+A +L   M     +PD + ++ +
Sbjct: 544 GVDLYG------------------------RAGQLDKAKKLIDSM---PFEPDAMVWMTL 576

Query: 613 LTACSHSGLVDVGVEI 628
           L AC   G V++  ++
Sbjct: 577 LGACRIHGNVELASDV 592



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 132/551 (23%), Positives = 238/551 (43%), Gaps = 110/551 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  L +  L++GL ++ F  + L+++Y+KC     A+ +FD MP ++  SWNA+++   +
Sbjct: 112 GAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTE 171

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S D+  A +LF EM ER                              EG VP   T AS 
Sbjct: 172 SGDMASALELFLEM-ER------------------------------EGLVPDEATFAS- 199

Query: 127 FKASTALLDVEHGRRC------HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
                 LL    G  C      HG ++K G    + V NA ++ Y++CG  K +  +F+ 
Sbjct: 200 ------LLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDG 253

Query: 181 MSEPNE-VTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           + +  + +++ AM+          EA++ F R+M    V  D  S +S++  C+  G   
Sbjct: 254 IGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHG--- 310

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIF 295
                   D++      G+ +H L IK   E    + N+L+ MY +   N  M+ A   F
Sbjct: 311 ------HDDHQ------GRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCF 358

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS------------------------ 331
           ++L  +  VSWN M+ GY Q   S  A++  + M S                        
Sbjct: 359 NSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQ 418

Query: 332 -----------CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                       GF  ++  S +++    +SG I   R+ F+     S   WNAM+  Y+
Sbjct: 419 LGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYA 478

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID-- 438
           Q    +    LF EM  R    D  T   +++SC+  G+++ G ++   +++T   +   
Sbjct: 479 QHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI-LNTMETKYGVPLR 537

Query: 439 -NYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-----SLDIEAFM 491
             + A G + +Y +  + + A+++   +P E D + W +++    ++     + D+ + +
Sbjct: 538 MEHYACG-VDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHL 596

Query: 492 FFKQMRQNEMY 502
           F  + RQ+  Y
Sbjct: 597 FVAEPRQHSTY 607


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 203/667 (30%), Positives = 331/667 (49%), Gaps = 52/667 (7%)

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
           F P      ++ +  ++  +V+HGRR H  V   G ++N  V   L+ +YA+CG    A 
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            VFE +   +   +T M+    +      AL MF  M  + V    V+  ++L  CA   
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACA--- 117

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                   +    K    +HGQ      ++ GFE D+ +  +L++MY K G +  A   F
Sbjct: 118 --------STESLKDGMEIHGQ-----ILQQGFEGDVFVGTALINMYNKCGSVRGAWDSF 164

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT--------------- 340
             L  R VVSW  MIA   Q  Q   A  L +RM+  G  P+++T               
Sbjct: 165 KRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLS 224

Query: 341 ---------SINMLVACVR-----------SGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                    S  ++ + VR           +G +   R +F+ M    V +WN +++ Y 
Sbjct: 225 EGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYV 284

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           Q+EN  EA++LF  +Q  G+K +  T  ++L+   ++  L  GK +H    +     D  
Sbjct: 285 QNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVV 344

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           VA+ L+ +Y +C+    A ++F  +   D++ W  M    + N    EA   F++M+   
Sbjct: 345 VATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEG 404

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
             PT  +   VL +CA L++  +GRQ+H+ I ++G+  ++ V +ALI MY KCG +  AR
Sbjct: 405 RRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEAR 464

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
             F+ M  ++ + WN M+  YAQ+GY DE ++L+  M   G K D ++FV++L+A SHSG
Sbjct: 465 SVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSG 524

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA-EMLIDEMPCKDDPVIWEV 679
            V  G + F +M  D  + P  + Y C++D LGRAG   EA ++++    C  D ++W  
Sbjct: 525 SVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMT 584

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL +CR H     AK AAE++   DP +S  Y +L+N+Y++ G WD +  +R+LM    +
Sbjct: 585 LLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGV 644

Query: 740 VKDPAYS 746
            K+P  S
Sbjct: 645 KKEPGRS 651



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 151/645 (23%), Positives = 280/645 (43%), Gaps = 114/645 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H+   G   +  +C  LI++Y++C +   AQ +F+ +  KD             
Sbjct: 24  GRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKD------------- 70

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             V +W  +I    + G  ++AL ++ +M  E  +PT +T  ++
Sbjct: 71  ------------------VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAI 112

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  +   ++ G   HG +++ G + +++V  AL+++Y KCG  + A   F+ +   + 
Sbjct: 113 LNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDV 172

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM++   + D+   A  ++R M    V  + ++L +V             D    S
Sbjct: 173 VSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYG--------DPHYLS 224

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           + KF        ++ L      E+D+ + NS ++M+   G +  A  +F ++ +R VV+W
Sbjct: 225 EGKF--------IYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTW 276

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
           N++I  Y Q     +A+ L  R++  G + +++T + ML        +  G+        
Sbjct: 277 NIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 336

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                      ++F  M S  V +W  M  +Y+Q+   KEA++L
Sbjct: 337 AGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQL 396

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+EMQ  G +P   TL  +L +CA +  L+ G+Q+H+  ++    ++  V + LI +Y K
Sbjct: 397 FQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGK 456

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C +   A  VF ++ + DI+ WNSM+   + +    E    F QM+ +       SF +V
Sbjct: 457 CGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSV 516

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS+ +   S   G Q    + +D      F  +   E+Y    D+ G             
Sbjct: 517 LSALSHSGSVTDGYQYFVAMLQD------FSITPTPELYGCVVDLLG------------- 557

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
                      + G   EAV +   +  SG  PD I ++ +L AC
Sbjct: 558 -----------RAGRIQEAVDIVLKL--SGCLPDGILWMTLLGAC 589



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 179/375 (47%), Gaps = 24/375 (6%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A +LF++M +R+VV+WN +I+  V+N    +A+ ++ ++  +G     IT   +    T+
Sbjct: 261 ARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTS 320

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           L  +  G+  H LV + G D+++ VA AL+SLY +C     A  +F +M   + +T+T M
Sbjct: 321 LTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVM 380

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
               A+     EAL++F+ M  +     S +L +VL  CA                  + 
Sbjct: 381 CVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH----------------LAA 424

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G+Q+H   I+ GF  ++ +  +L++MY K G M  A  +F  + +R ++ WN M+  
Sbjct: 425 LQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGA 484

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-----PSP 367
           Y Q     + ++L  +M+  G + D V+ +++L A   SG +  G + F +M      +P
Sbjct: 485 YAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITP 544

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +   +  ++    ++   +EA+ +   ++  G  PD      +L +C      +  K   
Sbjct: 545 TPELYGCVVDLLGRAGRIQEAVDIV--LKLSGCLPDGILWMTLLGACRTHNKTDQAKAAA 602

Query: 428 AASL-KTASHIDNYV 441
              L +  SH   YV
Sbjct: 603 EQVLERDPSHSGAYV 617



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 8/105 (7%)

Query: 3   AHVA----GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           AH+A    G+ +H+HI+ NG   +  +   LI +Y KC     A+ +F+KM  +DI  WN
Sbjct: 420 AHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWN 479

Query: 59  AILSAQCKSDDLEFAYKLFDEM----PERNVVSWNNLISALVRNG 99
           ++L A  +    +   +LF++M     + + VS+ +++SAL  +G
Sbjct: 480 SMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSG 524


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 187/602 (31%), Positives = 326/602 (54%), Gaps = 59/602 (9%)

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++A++S  A  ++  EA+  F  M+      +    + V   C+ +            
Sbjct: 8   VSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNK------------ 55

Query: 247 DNKFSRNVH-GQQVHCLTIKLG-FEADLHLSNSLLDMYAK-NGDMDSAEVIFSNLPERSV 303
                 N+  G+ +    +K G FE+D+ +  +L+DM+ K NGD++SA  +F  +P+R+V
Sbjct: 56  -----ENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNV 110

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS---------------------- 341
           V+W +MI  + Q   S  A++L   M   G+ PD  T                       
Sbjct: 111 VTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCL 170

Query: 342 ----------------INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN- 384
                           ++M   CV  G +   R++FD MP  +V SW A+++ Y QS   
Sbjct: 171 VMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGC 230

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            +EAI+LF EM    VKP+  T + +L +CA +  +  G+QV+A  +K      N V + 
Sbjct: 231 DREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNS 290

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI +YS+C   E A + F  + E ++V +N+++   + +    EAF  F ++        
Sbjct: 291 LISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVN 350

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            F+FA++LS  + + +  +G Q+H++I K G+ +++ + +ALI MY +CG+I  A Q F+
Sbjct: 351 AFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFN 410

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            M   N ++W  MI G+A++G+   A+  +  M+ +GV P+++T++A+L+ACSH GL+  
Sbjct: 411 EMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISE 470

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G++ F SM+++HG+ P ++HY C++D LGR+GH  EA  L++ MP K D ++    L +C
Sbjct: 471 GLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGAC 530

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           R+H N+ L K AAE +   DP + A Y LL+N+++S G+W+++  +R+ M E  + K+  
Sbjct: 531 RVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAG 590

Query: 745 YS 746
            S
Sbjct: 591 CS 592



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 214/433 (49%), Gaps = 59/433 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKC---NNTHSAQHLFDKMPHKDIYSWNAILSA 63
           G+  H  ++++GL  D  +   L+++Y+KC    +   A+ +FD+MP  ++ SW AI++ 
Sbjct: 164 GRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITG 223

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             +S                               G + +A+ ++ +M      P H T 
Sbjct: 224 YVQS------------------------------GGCDREAIELFLEMVQGQVKPNHFTF 253

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +SV KA   L D+  G + + LV+K+ L     V N+L+S+Y++CG  ++A   F+ + E
Sbjct: 254 SSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFE 313

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V++  +++  AK+    EA E+F  +      +++ + +S+L               
Sbjct: 314 KNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSG------------- 360

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
           A S     +   G+Q+H   +K GF+++LH+ N+L+ MY++ G++++A  +F+ + + +V
Sbjct: 361 ASSIGAIGK---GEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNV 417

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           +SW  MI G+ +   +T+A+E   +M   G  P+EVT I +L AC   G I  G + F S
Sbjct: 418 ISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKS 477

Query: 364 MP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           M       P +  +  ++    +S + +EA++L   M F   K D   L   L +C   G
Sbjct: 478 MKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPF---KADALVLRTFLGACRVHG 534

Query: 419 ILESGKQVHAASL 431
            ++ GK  HAA +
Sbjct: 535 NMDLGK--HAAEM 545



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 223/473 (47%), Gaps = 91/473 (19%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK++   +L+ G F+ D  +   LI+++ K N                            
Sbjct: 61  GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNG--------------------------- 93

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
              DLE AYK+FD MP+RNVV+W  +I+   + G    A+ ++  M   G+VP   TL+ 
Sbjct: 94  ---DLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSG 150

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC---GWTKHAVPVFEEMS 182
           V  A   +  +  GR+ H LV+K GLD ++ V  +L+ +YAKC   G    A  VF+ M 
Sbjct: 151 VVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMP 210

Query: 183 EPNEVTFTAMMSGLAKT---DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
             N +++TA+++G  ++   DR  EA+E+F  M++  V  +  + SSVL  CA       
Sbjct: 211 VHNVMSWTAIITGYVQSGGCDR--EAIELFLEMVQGQVKPNHFTFSSVLKACAN-----L 263

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           SD++            G+QV+ L +K+   +   + NSL+ MY++ G+M++A   F  L 
Sbjct: 264 SDIWL-----------GEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLF 312

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------- 348
           E+++VS+N ++  Y +   S +A EL   ++  G   +  T  ++L              
Sbjct: 313 EKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQ 372

Query: 349 ------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                    R G+I+   ++F+ M   +V SW +M++ +++   
Sbjct: 373 IHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGF 432

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
              A++ F +M   GV P+  T   +LS+C+ +G++  G + H  S+K    I
Sbjct: 433 ATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLK-HFKSMKVEHGI 484



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 134/263 (50%), Gaps = 21/263 (7%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N+++S   +  ++E A K FD + E+N+VS+N +++A  ++   E+A  ++N++   G  
Sbjct: 289 NSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTG 348

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
               T AS+   ++++  +  G + H  ++K G   N+++ NAL+S+Y++CG  + A  V
Sbjct: 349 VNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQV 408

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F EM + N +++T+M++G AK      ALE F  M+   VS + V+  +VL  C+  G  
Sbjct: 409 FNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLI 468

Query: 238 VES-----------------DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
            E                  + +A   +   R+ H ++   L   + F+AD  +  + L 
Sbjct: 469 SEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLG 528

Query: 281 MYAKNGDMD----SAEVIFSNLP 299
               +G+MD    +AE+I    P
Sbjct: 529 ACRVHGNMDLGKHAAEMILEQDP 551


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 183/526 (34%), Positives = 291/526 (55%), Gaps = 54/526 (10%)

Query: 274 LSNSLLDMYAKNGD------------------MDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           L N L++ YAK G+                  ++SA  +F  L +R V+SWN MI+GY  
Sbjct: 169 LWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVS 228

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----------------- 358
              S K ++L ++M   G   D  T ++++  C  +G +  GR                 
Sbjct: 229 NGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTL 288

Query: 359 ------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                             ++F++M   SV SW +M++ Y++      +++LF EM+  G+
Sbjct: 289 NNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGI 348

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
            PD  T+  IL +CA  G+LE+GK VH    +     D +V++ L+ +Y+KC     A  
Sbjct: 349 SPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHS 408

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           VF  +   DIV WN+MI G S NSL  EA   F +M+ N   P   + A +L +CA L++
Sbjct: 409 VFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSK-PNSITMACILPACASLAA 467

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
             +G+++H  I ++G+  D  V +AL++MY KCG +  AR  FDM+  K+ V+W  MI G
Sbjct: 468 LERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAG 527

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           Y  +GYG EA+  + +M  SG++PD+++F++IL ACSHSGL+D G   FN M+ +  +EP
Sbjct: 528 YGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEP 587

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
             +HY C++D L RAG+  +A   I  MP + D  IW  LL  CR++ +V+LA++ AE +
Sbjct: 588 KSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHV 647

Query: 701 FRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           F L+P+N+  Y LLANIY+   +W++++ +RE +    + K+P  S
Sbjct: 648 FELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCS 693



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 225/470 (47%), Gaps = 70/470 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+ I  N +  D  L ++L+ +Y  C +    + +FDK+ ++ ++ WN +++   K
Sbjct: 120 GRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAK 179

Query: 67  SDD------------------LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY 108
             +                  +E A KLFDE+ +R+V+SWN++IS  V NGL EK L ++
Sbjct: 180 IGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLF 239

Query: 109 NKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC 168
            +M   G      T+ SV    +    +  GR  HG  IK    K + + N LL +Y+K 
Sbjct: 240 EQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKS 299

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           G    A+ VFE M E + V++T+M++G A+      ++ +F  M ++ +S D  +++++L
Sbjct: 300 GNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTIL 359

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
             CA  G  +E               +G+ VH    +   ++DL +SN+L+DMYAK G M
Sbjct: 360 HACACTGL-LE---------------NGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSM 403

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
             A  +FS +  + +VSWN MI GY +     +A+ L   M+    +P+ +T   +L AC
Sbjct: 404 GDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQY-NSKPNSITMACILPAC 462

Query: 349 -----------------------------------VRSGDIKTGREMFDSMPSPSVSSWN 373
                                              ++ G +   R +FD +P   + SW 
Sbjct: 463 ASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWT 522

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            M++ Y       EAI  F EM+  G++PD  +   IL +C+  G+L+ G
Sbjct: 523 VMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 572



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 235/493 (47%), Gaps = 33/493 (6%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+++H +      E D  L + L+ MY   GD+     IF  +    V  WN+++ GY +
Sbjct: 120 GRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAK 179

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                +++ L +RM+  G                    +++ R++FD +    V SWN+M
Sbjct: 180 IGNFRESLSLFKRMRELGIR-----------------RVESARKLFDELGDRDVISWNSM 222

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +S Y  +   ++ + LF +M   G+  D  T+  +++ C+  G+L  G+ +H  ++K + 
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
             +  + + L+ +YSK      A +VF  + E  +V W SMIAG +   L   +   F +
Sbjct: 283 GKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHE 342

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M +  + P  F+  T+L +CA       G+ VH  I+++   +D+FV +AL++MY KCG 
Sbjct: 343 MEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGS 402

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  A   F  M  K+ V+WN MI GY++N   +EA+ L+ +M  +  KP+ IT   IL A
Sbjct: 403 MGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPA 461

Query: 616 CSHSGLVDVGVEIF-----NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
           C+    ++ G EI      N   LD  V         ++D   + G    A +L D +P 
Sbjct: 462 CASLAALERGQEIHGHILRNGFSLDRHVA------NALVDMYLKCGALGLARLLFDMIPE 515

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFR--LDPKNSAPYSLLANIYSSLGRWDDLR 728
           K D V W V+++   +H     A  A  E+    ++P   +  S+L     S G  D+  
Sbjct: 516 K-DLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHS-GLLDEGW 573

Query: 729 AVRELMSENCIVK 741
               +M  NC ++
Sbjct: 574 GFFNMMRNNCCIE 586



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 245/530 (46%), Gaps = 73/530 (13%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  SV +    L  ++ GRR H ++    ++ +  + + L+ +Y  CG  +    +F+++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLM----IRKAVSI----------DSVSLSSV 227
           +      +  +M+G AK     E+L +F+ M    IR+  S           D +S +S+
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 228 LGVCAREG--------------CGVESD------VFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +      G               G+ +D      V A   N     + G+ +H   IK  
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNT-GMLLLGRALHGYAIKAS 281

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F  +L L+N LLDMY+K+G+++SA  +F  + ERSVVSW  MIAGY ++  S  ++ L  
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---------------------------- 359
            M+  G  PD  T   +L AC  +G ++ G++                            
Sbjct: 342 EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCG 401

Query: 360 -------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                  +F  M    + SWN M+  YS++    EA+ LF EMQ+   KP+  T+A IL 
Sbjct: 402 SMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILP 460

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +CA++  LE G+++H   L+    +D +VA+ L+ +Y KC    LA  +F  IPE D+V 
Sbjct: 461 ACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVS 520

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           W  MIAG  ++    EA   F +MR + + P + SF ++L +C+      +G      + 
Sbjct: 521 WTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMR 580

Query: 533 KDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMMHGKNTVT-WNEMIHG 580
            +  +       A ++++  + G++  A +F  MM  +   T W  ++ G
Sbjct: 581 NNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 630



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 213/419 (50%), Gaps = 26/419 (6%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           K++   N +L    KS +L  A ++F+ M ER+VVSW ++I+   R GL + ++ ++++M
Sbjct: 284 KELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEM 343

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
             EG  P   T+ ++  A      +E+G+  H  + +  +  +++V+NAL+ +YAKCG  
Sbjct: 344 EKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSM 403

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A  VF EM   + V++  M+ G +K     EAL +F  M   +   +S++++ +L  C
Sbjct: 404 GDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPAC 462

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A                  +    GQ++H   ++ GF  D H++N+L+DMY K G +  A
Sbjct: 463 A----------------SLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLA 506

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
            ++F  +PE+ +VSW VMIAGYG     ++AI     M++ G EPDEV+ I++L AC  S
Sbjct: 507 RLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHS 566

Query: 352 GDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
           G +  G   F+ M +     P    +  ++   +++ N  +A K  + M    ++PD T 
Sbjct: 567 GLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMP---IEPDATI 623

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
              +L  C     ++  ++V     +       Y    L  IY++ ++ E  +++  RI
Sbjct: 624 WGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVL-LANIYAEAEKWEEVKKLRERI 681



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/402 (22%), Positives = 166/402 (41%), Gaps = 64/402 (15%)

Query: 334 FEPDEVTSI---NMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
           F P   T +   N+  +C   G      E  D      ++ +N  +  + +  N + A++
Sbjct: 34  FRPSSKTPLVSSNLYHSCATIGTSVLPSETIDC----KITDYNIEICRFCELGNLRRAME 89

Query: 391 LFREMQFRGVKPDRT--TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           L  +      KPD    T   +L  CA +  ++ G+++H+        +D  + S L+ +
Sbjct: 90  LINQ----SPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFM 145

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ---------- 498
           Y  C       R+F ++    +  WN ++ G +      E+   FK+MR+          
Sbjct: 146 YVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESAR 205

Query: 499 --------------NEMYPTQFS-------------------------FATVLSSCAKLS 519
                         N M     S                           +V++ C+   
Sbjct: 206 KLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTG 265

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
               GR +H    K  +  ++ + + L++MY K G++  A Q F+ M  ++ V+W  MI 
Sbjct: 266 MLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIA 325

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GYA+ G  D +VRL+ +M   G+ PD  T   IL AC+ +GL++ G ++ N ++ ++ ++
Sbjct: 326 GYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIK-ENKMQ 384

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
             L     ++D   + G   +A  +  EM  K D V W  ++
Sbjct: 385 SDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTMI 425



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 4/111 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H HILRNG   D  + N L+++Y KC     A+ LFD +P KD+ SW  +++    
Sbjct: 471 GQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGM 530

Query: 67  SDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
                 A   F+EM     E + VS+ +++ A   +GL ++    +N M N
Sbjct: 531 HGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRN 581


>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 696

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 210/648 (32%), Positives = 331/648 (51%), Gaps = 59/648 (9%)

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP--VFEEMSEPNEVTFTAMMSGLAK 198
           R H  ++K G+       N LL+ Y++      A    VF+E+   +EV++ A+++  A 
Sbjct: 12  RSHASLLKSGVAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAA 70

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
           +    EA  + R M  + ++ ++ +L S L                +S     R   G Q
Sbjct: 71  SGAHPEAWRLLRAMHAQGLASNTFALGSAL----------------RSAAVARRPAIGAQ 114

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +  L +K G   ++  +++LLD+YAK G +  A  +F  +PER+ VSWN +IAGY +   
Sbjct: 115 LQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGD 174

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVAC------------------------------ 348
              A+EL   M+  G  PDE T  ++L A                               
Sbjct: 175 MASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAA 234

Query: 349 ----VRSGDIKTGREMFDSMPS-PSVSSWNAMLSSYSQSENHKEAIKLF-REMQFRGVKP 402
                + G +K  R +FD +     + SWNAML +Y+ +    EA+K F R MQ  GV P
Sbjct: 235 ITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHP 294

Query: 403 DRTTLAIILSSCAAMGILE-SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN---ELA 458
           D  +   I+SSC+  G  +  G+ +H   +K+A      V + LI +Y++   N   E A
Sbjct: 295 DMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDA 354

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            + F+ +   D V WNSM+ G S + L  +A  FF+ M    +   +++F+  L S ++L
Sbjct: 355 YKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSEL 414

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           +    G+Q+H  +   G+ ++ FV S+LI MY K G I  AR+ F+     ++V WN MI
Sbjct: 415 AVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMI 474

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GYAQ+G  +    L+ +M+      D ITFV ++T+CSH+GLVD G EI N+M+  +GV
Sbjct: 475 FGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGV 534

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
              ++HY C +D  GRAG   +A+ LID MP + D ++W  LL +CR+H NV LA   A 
Sbjct: 535 PLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVAS 594

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LF  +P+  + Y LL+++YS LG W D   V+ +M +  + K P +S
Sbjct: 595 HLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWS 642



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 152/616 (24%), Positives = 268/616 (43%), Gaps = 95/616 (15%)

Query: 57  WNAILSAQCKS--DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
           WN +L+A  +S  D L  A ++FDE+P R+ VSWN L++A   +G   +A  +   M  +
Sbjct: 28  WNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQ 87

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G       L S  +++        G +   L +K GL  N++ A+ALL +YAKCG  + A
Sbjct: 88  GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             VF+ M E N V++ A+++G  ++  +  ALE+F  M R+ ++ D  + +S+L      
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGP 207

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
            C +                   Q+H   +K G    L + N+ +  Y++ G +  +  I
Sbjct: 208 SCFLM-----------------HQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRI 250

Query: 295 FSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQR-MKSCGFEPDEVTSINMLVACVRSG 352
           F  + + R ++SWN M+  Y       +A++   R M+  G  PD  +  +++ +C   G
Sbjct: 251 FDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHG 310

Query: 353 -DIKTGR--------------------------------------EMFDSMPSPSVSSWN 373
            D   GR                                      + F+S+      SWN
Sbjct: 311 HDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWN 370

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           +ML+ YSQ     +A+K FR M    V+ D    +  L S + + +L+ GKQ+H   + +
Sbjct: 371 SMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHS 430

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               +++V+S LI +YSK    + A + F    +   V WN+MI G + +       + F
Sbjct: 431 GFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILF 490

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
            +M Q +      +F  +++SC+      +G ++   +E          G  L   +  C
Sbjct: 491 NEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETK-------YGVPLRMEHYAC 543

Query: 554 G-DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           G D+YG                        + G  D+A +L   M     +PD + ++ +
Sbjct: 544 GVDLYG------------------------RAGQLDKAKKLIDSM---PFEPDAMVWMTL 576

Query: 613 LTACSHSGLVDVGVEI 628
           L AC   G V++  ++
Sbjct: 577 LGACRIHGNVELASDV 592



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/551 (23%), Positives = 237/551 (43%), Gaps = 110/551 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  L +  L++GL ++ F  + L+++Y+KC     A+ +FD MP ++  SWNA+++   +
Sbjct: 112 GAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTE 171

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S D+  A +LF EM ER                              EG  P   T AS 
Sbjct: 172 SGDMASALELFLEM-ER------------------------------EGLAPDEATFAS- 199

Query: 127 FKASTALLDVEHGRRC------HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
                 LL    G  C      HG ++K G    + V NA ++ Y++CG  K +  +F+ 
Sbjct: 200 ------LLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDG 253

Query: 181 MSEPNE-VTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           + +  + +++ AM+          EA++ F R+M    V  D  S +S++  C+  G   
Sbjct: 254 IGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHG--- 310

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIF 295
                   D++      G+ +H L IK   E    + N+L+ MY +   N  M+ A   F
Sbjct: 311 ------HDDHQ------GRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCF 358

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS------------------------ 331
           ++L  +  VSWN M+ GY Q   S  A++  + M S                        
Sbjct: 359 NSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQ 418

Query: 332 -----------CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                       GF  ++  S +++    +SG I   R+ F+     S   WNAM+  Y+
Sbjct: 419 LGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYA 478

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID-- 438
           Q    +    LF EM  R    D  T   +++SC+  G+++ G ++   +++T   +   
Sbjct: 479 QHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI-LNTMETKYGVPLR 537

Query: 439 -NYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-----SLDIEAFM 491
             + A G + +Y +  + + A+++   +P E D + W +++    ++     + D+ + +
Sbjct: 538 MEHYACG-VDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHL 596

Query: 492 FFKQMRQNEMY 502
           F  + RQ+  Y
Sbjct: 597 FVAEPRQHSTY 607


>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Glycine max]
          Length = 686

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 217/666 (32%), Positives = 324/666 (48%), Gaps = 86/666 (12%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           ++H +  H L+IK+GL  +I++ N+++S+YAKC     A  +F+EM   N V+FT M+S 
Sbjct: 19  IKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNIVSFTTMVSA 78

Query: 196 LAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
              + R  EAL ++  M+  K V  +    S+VL     + CG+  DV            
Sbjct: 79  FTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVL-----KACGLVGDVEL---------- 123

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD-MDSAEV-------------------- 293
            G  VH    +   E D  L N+LLDMY K G  MD+  V                    
Sbjct: 124 -GMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHA 182

Query: 294 ----------IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
                     +F  +PE  +VSWN +IAG      S  A++ L  M   G + D  T   
Sbjct: 183 KQGLMRDAFNLFDQMPEPDLVSWNSIIAGLADN-ASPHALQFLSMMHGKGLKLDAFTFPC 241

Query: 344 MLVACVRSGDIKTGREM-----------------------------------FD--SMPS 366
            L AC   G++  GR++                                   FD  S  +
Sbjct: 242 ALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLA 301

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
            S++ WN+MLS Y  + +   A+ +   M   G + D  T +I L  C     L    QV
Sbjct: 302 ESLAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQV 361

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H   +     +D+ V S LI +Y+K      A R+F R+P  D+V W+S+I G +   L 
Sbjct: 362 HGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLG 421

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
              F  F  M   ++    F  + VL   + L+S   G+Q+H+   K GY ++  + +AL
Sbjct: 422 TLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTAL 481

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
            +MY KCG+I  A   FD ++  +T++W  +I G AQNG  D+A+ +   MI SG KP+ 
Sbjct: 482 TDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNK 541

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           IT + +LTAC H+GLV+    IF S++ +HG+ P  +HY CM+D   +AG F EA  LI+
Sbjct: 542 ITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLIN 601

Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDD 726
           +MP K D  IW  LL +C  + N  LA   AE L    P++++ Y +L+N+Y+SLG WD+
Sbjct: 602 DMPFKPDKTIWCSLLDACGTYKNRHLANIVAEHLLATSPEDASVYIMLSNVYASLGMWDN 661

Query: 727 LRAVRE 732
           L  VRE
Sbjct: 662 LSKVRE 667



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 164/679 (24%), Positives = 286/679 (42%), Gaps = 150/679 (22%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            K LH+ I++ GL +  FL N +I +Y+KC+    A+ LFD+MPH++I            
Sbjct: 22  AKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNI------------ 69

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLAS 125
                              VS+  ++SA   +G   +AL++YN M     V P     ++
Sbjct: 70  -------------------VSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSA 110

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------------- 169
           V KA   + DVE G   H  V +  L+ +  + NALL +Y KCG                
Sbjct: 111 VLKACGLVGDVELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKN 170

Query: 170 ---WT------------KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              W             + A  +F++M EP+ V++ ++++GLA  +    AL+   +M  
Sbjct: 171 STSWNTLILGHAKQGLMRDAFNLFDQMPEPDLVSWNSIIAGLAD-NASPHALQFLSMMHG 229

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
           K + +D+ +       CA + CG+  ++             G+Q+HC  IK G E   + 
Sbjct: 230 KGLKLDAFTFP-----CALKACGLLGEL-----------TMGRQIHCCIIKSGLECSCYC 273

Query: 275 SNSLLDMYAKNGDMDSAEVIF-SNLP-ERSVVSWNVMIAGY---GQKYQSTKAIELLQR- 328
            +SL+DMY+    +D A  IF  N P   S+  WN M++GY   G  +++   I  +   
Sbjct: 274 ISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVANGDWWRALGMIACMHHS 333

Query: 329 ------------MKSC-------------------GFEPDEVTSINMLVACVRSGDIKTG 357
                       +K C                   G+E D V    ++    + G+I + 
Sbjct: 334 GAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSA 393

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
             +F+ +P+  V +W++++   ++         LF +M    ++ D   L+I+L   +++
Sbjct: 394 LRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSL 453

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
             L+SGKQ+H+  LK     +  + + L  +Y+KC   E A  +F  + E+D + W  +I
Sbjct: 454 ASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGII 513

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            G + N    +A     +M ++   P + +   VL++C            HA + ++ + 
Sbjct: 514 VGCAQNGRADKAISILHKMIESGTKPNKITILGVLTACR-----------HAGLVEEAWT 562

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
             IF           C + Y                 N M+  +A+ G   EA  L  DM
Sbjct: 563 --IFKSIETEHGLTPCPEHY-----------------NCMVDIFAKAGRFKEARNLINDM 603

Query: 598 IASGVKPDDITFVAILTAC 616
                KPD   + ++L AC
Sbjct: 604 ---PFKPDKTIWCSLLDAC 619



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 208/504 (41%), Gaps = 70/504 (13%)

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
           +F    H + +H L IKLG    + L NS++ +YAK    D A  +F  +P R++VS+  
Sbjct: 15  RFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNIVSFTT 74

Query: 309 MIAGYGQKYQSTKAIELLQRM-----------------KSCG------------------ 333
           M++ +    +  +A+ L   M                 K+CG                  
Sbjct: 75  MVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVSEA 134

Query: 334 -FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
             E D V    +L   V+ G +   + +F  +P  + +SWN ++  +++    ++A  LF
Sbjct: 135 RLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFNLF 194

Query: 393 REM------------------------QF------RGVKPDRTTLAIILSSCAAMGILES 422
            +M                        QF      +G+K D  T    L +C  +G L  
Sbjct: 195 DQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTM 254

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL--DIVCWNSMIAGL 480
           G+Q+H   +K+      Y  S LI +YS C+  + A ++F +   L   +  WNSM++G 
Sbjct: 255 GRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGY 314

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
             N     A      M  +      ++F+  L  C    +     QVH  I   GY  D 
Sbjct: 315 VANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDH 374

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            VGS LI++Y K G+I  A + F+ +  K+ V W+ +I G A+ G G     L+ DM+  
Sbjct: 375 VVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSLFMDMVHL 434

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
            ++ D      +L   S    +  G +I +S  L  G E      T + D   + G   +
Sbjct: 435 DLEIDHFVLSIVLKVSSSLASLQSGKQI-HSFCLKKGYESERVITTALTDMYAKCGEIED 493

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSC 684
           A  L D +  + D + W  ++  C
Sbjct: 494 ALALFDCLY-EIDTMSWTGIIVGC 516



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 33/312 (10%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D   + + L  C     ++  K +H+  +K       ++ + +I +Y+KC R + A  +F
Sbjct: 2   DLNQIQLALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLF 61

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLSSS 521
             +P  +IV + +M++  + +    EA   +  M +++ + P QF ++ VL +C  +   
Sbjct: 62  DEMPHRNIVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDV 121

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G  VH  + +     D  + +AL++MY KCG +  A++ F  +  KN+ +WN +I G+
Sbjct: 122 ELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGH 181

Query: 582 AQNGYGDEAVRLYKDMI------------------------------ASGVKPDDITFVA 611
           A+ G   +A  L+  M                                 G+K D  TF  
Sbjct: 182 AKQGLMRDAFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPC 241

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE-MPC 670
            L AC   G + +G +I   + +  G+E      + +ID         EA  + D+  P 
Sbjct: 242 ALKACGLLGELTMGRQIHCCI-IKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPL 300

Query: 671 KDDPVIWEVLLS 682
            +   +W  +LS
Sbjct: 301 AESLAVWNSMLS 312



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 33/190 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +GK +H+  L+ G   +  +   L ++Y+KC     A  LFD +   D  SW  I     
Sbjct: 458 SGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGI----- 512

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                     I    +NG  +KA+S+ +KM   G  P  IT+  
Sbjct: 513 --------------------------IVGCAQNGRADKAISILHKMIESGTKPNKITILG 546

Query: 126 VFKASTALLDVEHGRRC-HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-E 183
           V  A      VE        +  + GL       N ++ ++AK G  K A  +  +M  +
Sbjct: 547 VLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFK 606

Query: 184 PNEVTFTAMM 193
           P++  + +++
Sbjct: 607 PDKTIWCSLL 616


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 205/651 (31%), Positives = 327/651 (50%), Gaps = 55/651 (8%)

Query: 135 DVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
            ++ G+  H  +IKI  L    Y+AN L+  YAKCG    A  VFE +   N V++  ++
Sbjct: 22  SLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLI 81

Query: 194 SGLAKTDRVVE--ALEMFRLMIRKAVSIDSVSLSSVLGVCARE-GCGVESDVFAQSDNKF 250
            GL+          LE+FR MI   +  D+ +   V    A   GC              
Sbjct: 82  HGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGC-------------- 127

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
             N   +QVH L IK     D+ + +SL++ Y K G +  A  +F  +PER++VSW  MI
Sbjct: 128 --NFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMI 185

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------------- 349
           +GY  K  + +A+ +   M+      +E    ++L A V                     
Sbjct: 186 SGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVL 245

Query: 350 --------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                         + G++     +F+     +  +W+A+++ YSQ+ +  +A+KLF +M
Sbjct: 246 EFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKM 305

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
            + G  P   TL  +L +C+ +  +E GKQ H   LK+      Y A+ L+ +Y+K    
Sbjct: 306 HYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFT 365

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
             A + F  + E D+V W S+IAG   N  + EA   + +M+  ++ P + + A+VL +C
Sbjct: 366 GDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKAC 425

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           + L++  QG+Q+HA+  K G   ++ + SAL  MY KCG +      F  M  ++ V+WN
Sbjct: 426 SNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWN 485

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI G +QNG+G EA+ L+++M   G KPD ITFV +L+ACSH G+V  G   FN M  +
Sbjct: 486 AMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDE 545

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
             + P ++HY CM+D L RAG  +EA+  I+         +W +LL +CR H N  L   
Sbjct: 546 FCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAY 605

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A E+L  L  + S+ Y LL++IY+++GR  D+  VR +M    + K+   S
Sbjct: 606 AGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCS 656



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 162/560 (28%), Positives = 265/560 (47%), Gaps = 90/560 (16%)

Query: 1   KKAHVAGKLLHAHILRNGLFDD-TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           +K+   G++LHAHI++        +L N LI+ Y+KC + H A+ +F+ + HK       
Sbjct: 20  QKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHK------- 72

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK--ALSVYNKMSNEGFV 117
                                   NVVS+N LI  L  NG +     L ++ +M     +
Sbjct: 73  ------------------------NVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNIL 108

Query: 118 PTHITLASVFKASTALLDVEH-GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           P   T   VF A+   L      R+ H L IK     +++V ++L++ Y K G    A  
Sbjct: 109 PDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARK 168

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG--VCARE 234
           +F+ M E N V++T M+SG A      EAL +F LM     +++    +SVL   VC   
Sbjct: 169 LFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPE- 227

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
                   F  S         G+QVHC+ +K G    + + N+L+ MYAK G+++ + ++
Sbjct: 228 --------FVDS---------GKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLML 270

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F    +++ ++W+ +I GY Q   S KA++L  +M   GF P E T + +L AC     I
Sbjct: 271 FEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAI 330

Query: 355 KTG-----------------------------------REMFDSMPSPSVSSWNAMLSSY 379
           + G                                   R+ FD +  P +  W ++++ Y
Sbjct: 331 EEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGY 390

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
            Q+  ++EA+ ++  MQ R + P+  T+A +L +C+ +  LE GKQ+HA ++K     + 
Sbjct: 391 VQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPEL 450

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            + S L  +Y+KC   E    +F R+ + DIV WN+MI+GLS N    EA   F++MR  
Sbjct: 451 SIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLE 510

Query: 500 EMYPTQFSFATVLSSCAKLS 519
              P   +F TVLS+C+ + 
Sbjct: 511 GTKPDHITFVTVLSACSHMG 530



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 29/208 (13%)

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI-FVGSALIEMYCKCGDIYGARQ 561
           P   SF  +L   A   S  +G+ +HA I K  Y++   ++ + LI+ Y KCG ++GA+ 
Sbjct: 5   PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGY--GDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
            F+ +  KN V++N +IHG + NG    +  + L++ MIA+ + PD  TF  + TA +  
Sbjct: 65  VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAA-- 122

Query: 620 GLVDVGVEIFNSMQL-----------DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
             +++G   F++ Q+           D  V   L ++ C + C+       EA  L D M
Sbjct: 123 --LNLGCN-FDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCV------FEARKLFDRM 173

Query: 669 PCKDDPVIWEVLLSSCRLHANVRLAKRA 696
           P + + V W  ++S    +A+ ++AK A
Sbjct: 174 P-ERNLVSWTTMISG---YASKQMAKEA 197


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 201/648 (31%), Positives = 343/648 (52%), Gaps = 52/648 (8%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D   G+  H  ++K G   +++  N LL+ Y   G+ + A  +F+EM   N V+F  +  
Sbjct: 18  DPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQ 77

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G +++ +   A  +   + R+   ++    +++L +       V  D+   +D   S   
Sbjct: 78  GFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLL------VSMDL---ADTCLS--- 125

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
               VH    KLG +AD  +  +L+D Y+  G++D+A  +F  +  + +VSW  M+A Y 
Sbjct: 126 ----VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYA 181

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------------------- 348
           + Y    ++ L  +M+  G+ P+  T    L +C                          
Sbjct: 182 ENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLY 241

Query: 349 ---------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF-REMQFR 398
                     +SG+I   ++ F+ MP   +  W+ M+S Y+QS+  KEA++LF R  Q  
Sbjct: 242 VGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSS 301

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
            V P+  T A +L +CA++ +L  G Q+H+  LK     + +V++ L+ +Y+KC   E +
Sbjct: 302 VVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENS 361

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            ++F    E + V WN++I G        +A   F  M   ++ PT+ ++++VL + A L
Sbjct: 362 VKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASL 421

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
            +   GRQ+H+   K  Y  D  V ++LI+MY KCG I  AR  FD M  ++ V+WN +I
Sbjct: 422 VALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALI 481

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GY+ +G G EA+ L+  M  S  KP+ +TFV +L+ACS++GL+D G   F SM  D+G+
Sbjct: 482 CGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGI 541

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
           EP ++HYTCM+  LGR+G F EA  LI E+P +   ++W  LL +C +H N+ L K  A+
Sbjct: 542 EPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQ 601

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +  ++P++ A + LL+N+Y++  RWD++  VR+ M +  + K+P  S
Sbjct: 602 RVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLS 649



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 142/556 (25%), Positives = 260/556 (46%), Gaps = 83/556 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AGK LH HIL++G                                  D+++ N +L+   
Sbjct: 21  AGKSLHCHILKHG-------------------------------ASLDLFAQNILLNTYV 49

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               LE A KLFDEMP  N VS+  L     R+   ++A  +  ++  EG+        +
Sbjct: 50  HFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTT 109

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           + K   ++   +     H  V K+G   + +V  AL+  Y+ CG    A  VF+ +   +
Sbjct: 110 LLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKD 169

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T M++  A+     ++L +F  M       ++ ++S+ L  C     G+E+     
Sbjct: 170 MVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCN----GLEA----- 220

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
              K  ++VHG       +K+ ++ DL++  +LL++Y K+G++  A+  F  +P+  ++ 
Sbjct: 221 --FKVGKSVHG-----CALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIP 273

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMK-SCGFEPDEVTSINMLVAC---------------- 348
           W++MI+ Y Q  +S +A+EL  RM+ S    P+  T  ++L AC                
Sbjct: 274 WSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCV 333

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + G+I+   ++F      +  +WN ++  Y Q  + ++A+
Sbjct: 334 LKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKAL 393

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF  M    ++P   T + +L + A++  LE G+Q+H+ ++KT  + D+ VA+ LI +Y
Sbjct: 394 NLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMY 453

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC R + A   F ++ + D V WN++I G S++ L +EA   F  M+Q+   P + +F 
Sbjct: 454 AKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFV 513

Query: 510 TVLSSCAKLSSSFQGR 525
            VLS+C+      +GR
Sbjct: 514 GVLSACSNAGLLDKGR 529



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 206/428 (48%), Gaps = 54/428 (12%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   GK +H   L+     D ++   L+ELY+K      AQ  F++MP  D+  W+ ++
Sbjct: 219 EAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMI 278

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           S   +SD  + A +LF  M + +VV                              VP + 
Sbjct: 279 SRYAQSDKSKEALELFCRMRQSSVV------------------------------VPNNF 308

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T ASV +A  +L+ +  G + H  V+K+GLD N++V+NAL+ +YAKCG  +++V +F   
Sbjct: 309 TFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGS 368

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           +E NEV +  ++ G  +     +AL +F  M+   +    V+ SSVL   A       S 
Sbjct: 369 TEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASA-------SL 421

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           V  +          G+Q+H LTIK  +  D  ++NSL+DMYAK G +D A + F  + ++
Sbjct: 422 VALEP---------GRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQ 472

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
             VSWN +I GY       +A+ L   M+    +P+++T + +L AC  +G +  GR  F
Sbjct: 473 DEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHF 532

Query: 362 DSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            SM       P +  +  M+    +S    EA+KL  E+ F   +P       +L +C  
Sbjct: 533 KSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPF---QPSVMVWRALLGACVI 589

Query: 417 MGILESGK 424
              L+ GK
Sbjct: 590 HKNLDLGK 597



 Score = 42.7 bits (99), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 3/167 (1%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           S+A +L    +      G+ +H  I K G   D+F  + L+  Y   G +  A + FD M
Sbjct: 5   SYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEM 64

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
              NTV++  +  G++++     A RL   +   G + +   F  +L       L D  +
Sbjct: 65  PLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCL 124

Query: 627 EIFNSM-QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
            +   + +L H  +  +   T +ID     G+   A  + D +  KD
Sbjct: 125 SVHAYVYKLGHQADAFVG--TALIDAYSVCGNVDAARQVFDGIYFKD 169


>gi|347954462|gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
          Length = 830

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 229/779 (29%), Positives = 367/779 (47%), Gaps = 116/779 (14%)

Query: 6   AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            GK +HA IL+NG F   + ++  +L+  Y+KC                           
Sbjct: 88  TGKQIHARILKNGDFYAGNEYIETKLVIFYAKC--------------------------- 120

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
               D LE A  LF ++  RNV SW  +I    R GL E AL  + +M      P +  +
Sbjct: 121 ----DALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 176

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +V KA  AL     GR  HG V+K GL+  ++VA++L  +Y KCG    A  VF+E+ E
Sbjct: 177 PNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPE 236

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V + A++ G  +     EA+ +   M +  V    V++S+ L   A  G GV     
Sbjct: 237 RNVVAWNALLVGYVQNGMNEEAIRLLSDMRKDGVEPSRVTVSTCLSASANMG-GV----- 290

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q H + I  G E D  L  SLL+ Y K G ++ AE+IF  + ++ V
Sbjct: 291 ----------AEGKQSHAIAILNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFDKDV 340

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           V+WN++I+GY Q+     AI + Q M+    + D VT   ++ A  R+ ++K G+E+   
Sbjct: 341 VTWNLLISGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLMSAAARTKNLKFGKEVQCY 400

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           FDS     +  WN +L++Y++S    EA
Sbjct: 401 CIRHSLESDIVLASITMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA 460

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           ++LF EMQ   V P+  T  +I+ S    G +   K+                      +
Sbjct: 461 LRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKE----------------------M 498

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           + + Q + ++          +++ W +M+ G+  N    EA +F ++M+ + + P  FS 
Sbjct: 499 FLQMQSSGISP---------NLISWTTMMNGMVQNGCSEEAILFLRKMQDSGLRPNAFSI 549

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              LS+ A L+S   GR +H  I ++  + + + + ++L++MY KCGDI  A + F    
Sbjct: 550 TVALSASANLASLHFGRSIHGYIVRNLQHSSSVSIETSLVDMYAKCGDINKAERVFGSKL 609

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
                 +N MI  YA  G   EA+ LY+ +   G KPD+ITF ++L+AC+H G ++  +E
Sbjct: 610 YSELPLYNAMISAYALYGNVKEAITLYRSLEDMGNKPDNITFTSLLSACNHVGDINQAIE 669

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           IF  M   HGV+P L+HY  M+D L  AG    A  LI+EMP K D  + + L++SC   
Sbjct: 670 IFTDMVSKHGVKPCLEHYGLMVDLLASAGETDRALKLIEEMPYKPDARMIQSLVASCNKQ 729

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
               L +  +  L   +P+NS  Y  ++N Y+  G WD++  +R++M    + K+P  S
Sbjct: 730 HKSELVEYFSRHLLESEPENSGNYVTISNAYAVEGSWDEVVKMRDMMKAKGLTKNPGCS 788



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 159/680 (23%), Positives = 294/680 (43%), Gaps = 93/680 (13%)

Query: 78  DEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVE 137
           D+    +  S+ + +S+L +NG  ++ALS+  KM              + +      D+ 
Sbjct: 28  DQALNPSSTSYFHRVSSLCKNGEIKEALSLVTKMDFRNLRIGPEIYGEILQGCVYERDLC 87

Query: 138 HGRRCHGLVIKIG--LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
            G++ H  ++K G     N Y+   L+  YAKC   + A  +F ++   N  ++ A++  
Sbjct: 88  TGKQIHARILKNGDFYAGNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGV 147

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
             +      AL  F  M+   +  D+  + +V   C            A   ++F R VH
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACG-----------ALQWSRFGRGVH 196

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G       +K G E  + +++SL DMY K G +D A  +F  +PER+VV+WN ++ GY Q
Sbjct: 197 G-----YVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALLVGYVQ 251

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---------------- 359
              + +AI LL  M+  G EP  VT    L A    G +  G++                
Sbjct: 252 NGMNEEAIRLLSDMRKDGVEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLELDNIL 311

Query: 360 -------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                              +FD M    V +WN ++S Y Q    ++AI + + M+   +
Sbjct: 312 GTSLLNFYCKVGLIEYAEMIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLENL 371

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           K D  TL+ ++S+ A    L+ GK+V    ++ +   D  +AS  + +Y+KC     A++
Sbjct: 372 KYDCVTLSTLMSAAARTKNLKFGKEVQCYCIRHSLESDIVLASITMDMYAKCGSIVDAKK 431

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           VF    E D++ WN+++A  + + L  EA   F +M+   + P   ++  ++ S  +   
Sbjct: 432 VFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGE 491

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
             + +++  Q++  G                                  N ++W  M++G
Sbjct: 492 VNEAKEMFLQMQSSGI-------------------------------SPNLISWTTMMNG 520

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM--QLDHGV 638
             QNG  +EA+   + M  SG++P+  +    L+A ++   +  G  I   +   L H  
Sbjct: 521 MVQNGCSEEAILFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNLQHSS 580

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA---KR 695
              ++  T ++D   + G  ++AE +       + P ++  ++S+  L+ NV+ A    R
Sbjct: 581 SVSIE--TSLVDMYAKCGDINKAERVFGSKLYSELP-LYNAMISAYALYGNVKEAITLYR 637

Query: 696 AAEELFRLDPKNSAPYSLLA 715
           + E++    P N    SLL+
Sbjct: 638 SLEDMGN-KPDNITFTSLLS 656


>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 608

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 184/549 (33%), Positives = 298/549 (54%), Gaps = 45/549 (8%)

Query: 239 ESDVFA---QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG-DMDSAEVI 294
           +S+++A   Q+  K    +HG Q H   +K G E D ++ NSLL +Y K G DM     +
Sbjct: 59  KSNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRV 118

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  +  +  +SW  M++GY    +  KA+E+   M S G +P++ T  + + AC   G++
Sbjct: 119 FDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEV 178

Query: 355 KTGR-----------------------------------EMFDSMPSPSVSSWNAMLSSY 379
           + GR                                    +FD MP P V  W A+LS++
Sbjct: 179 RLGRCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAF 238

Query: 380 SQSENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           S+++ ++EA+ LF  M + +G+ PD +T   +L++C  +  L+ GK++H   +      +
Sbjct: 239 SKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSN 298

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
             V S L+ +Y K      A +VF+ +P  +IV W++++ G   N    +A   F++M +
Sbjct: 299 VVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEE 358

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
            ++Y     F TVL +CA L++   G+++H Q  + G   ++ V SALI++Y K G I  
Sbjct: 359 KDLY----CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDY 414

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A + +  M  +N +TWN M+   AQNG G+EAV  + DM+  G+KPD I+F+A+LTAC H
Sbjct: 415 ASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGH 474

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
           +GLV+ G   F  M   +G++P  +HY+CMID LGRAG F EAE L+D   C++D  +W 
Sbjct: 475 TGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRNDASLWG 534

Query: 679 VLLSSCRLHANV-RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
           VLL  C  + +   +A+R A+ +  L+PK    Y LL+N+Y ++GR  D   +R+LM   
Sbjct: 535 VLLGPCAANTDASSIAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALKIRKLMVRR 594

Query: 738 CIVKDPAYS 746
            + K    S
Sbjct: 595 GVAKTVGQS 603



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 211/465 (45%), Gaps = 86/465 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G   HAH++++GL  D  + N L+ LY K                             
Sbjct: 77  IHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLG--------------------------- 109

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
               D+    ++FD M  ++ +SW +++S  V +    KAL V+ +M + G  P   TL+
Sbjct: 110 ---PDMRETRRVFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLS 166

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S  KA   L +V  GR  HG+VI  G + N  +++ L  +Y        A  VF+EM EP
Sbjct: 167 SAVKACFELGEVRLGRCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEP 226

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVF 243
           + + +TA++S  +K D   EAL +F  M R K +  D  +  +VL  C            
Sbjct: 227 DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG----------- 275

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                   R   G+++H   I  G  +++ + +SLLDMY K+G +  A  +F+ +P +++
Sbjct: 276 -----NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNI 330

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           VSW+ ++ GY Q  +  KAIE+ + M+    E D      +L AC     ++ G+E+   
Sbjct: 331 VSWSALLGGYCQNGEHEKAIEMFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQ 386

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           +  M   ++ +WNAMLS+ +Q+   +EA
Sbjct: 387 YVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEA 446

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           +  F +M  +G+KPD  +   +L++C   G++E G+   A   K+
Sbjct: 447 VSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKS 491



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 225/500 (45%), Gaps = 59/500 (11%)

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW-TKHAVPVFEEMS 182
           AS+ +    +    HG + H  V+K GL+ +  V N+LLSLY K G   +    VF+ M 
Sbjct: 64  ASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFDGMF 123

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + +++T+MMSG   +   V+ALE+F  M+   +  +  +LSS +  C           
Sbjct: 124 VKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKAC----------- 172

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
           F   + +  R  HG     + I  GFE +  +S++L  MY  N +   A  +F  +PE  
Sbjct: 173 FELGEVRLGRCFHG-----VVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPD 227

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVAC------------- 348
           V+ W  +++ + +     +A+ L   M +  G  PD  T   +L AC             
Sbjct: 228 VICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIH 287

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  +SG ++  R++F+ MP  ++ SW+A+L  Y Q+  H+
Sbjct: 288 GKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHE 347

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           +AI++FREM+    + D      +L +CA +  +  GK++H   ++     +  V S LI
Sbjct: 348 KAIEMFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALI 403

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y K    + A RV+ ++   +++ WN+M++ L+ N    EA  FF  M +  + P   
Sbjct: 404 DLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYI 463

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           SF  VL++C       +GR   A + K  G        S +I++  + G    A    D 
Sbjct: 464 SFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDR 523

Query: 566 MHGKNTVT-WNEMIHGYAQN 584
              +N  + W  ++   A N
Sbjct: 524 AECRNDASLWGVLLGPCAAN 543



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 182/373 (48%), Gaps = 34/373 (9%)

Query: 55  YSWNAILSAQCK-----SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN 109
           + WN ++S+        + +   A ++FDEMPE +V+ W  ++SA  +N L E+AL ++ 
Sbjct: 193 FEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFY 252

Query: 110 KM-SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC 168
            M   +G VP   T  +V  A   L  ++ G+  HG +I  G+  N+ V ++LL +Y K 
Sbjct: 253 AMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKS 312

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           G  + A  VF  M   N V+++A++ G  +     +A+EMFR M  K    D     +VL
Sbjct: 313 GSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEEK----DLYCFGTVL 368

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
             CA             +  +  + +HGQ V     + G   ++ + ++L+D+Y K+G +
Sbjct: 369 KACA-----------GLAAVRLGKEIHGQYV-----RRGCFGNVIVESALIDLYGKSGCI 412

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
           D A  ++S +  R++++WN M++   Q  +  +A+     M   G +PD ++ I +L AC
Sbjct: 413 DYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTAC 472

Query: 349 VRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
             +G ++ GR  F  M       P    ++ M+    ++   +EA  L    + R    D
Sbjct: 473 GHTGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRN---D 529

Query: 404 RTTLAIILSSCAA 416
            +   ++L  CAA
Sbjct: 530 ASLWGVLLGPCAA 542



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 152/354 (42%), Gaps = 60/354 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++ NG+  +  + + L+++Y K  +   A+                       
Sbjct: 283 GKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREAR----------------------- 319

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++F+ MP +N+VSW+ L+    +NG  EKA+ ++ +M  +          +V
Sbjct: 320 --------QVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEEKDLY----CFGTV 367

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L  V  G+  HG  ++ G   N+ V +AL+ LY K G   +A  V+ +MS  N 
Sbjct: 368 LKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNM 427

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T+ AM+S LA+  R  EA+  F  M++K +  D +S  +VL  C   G   E       
Sbjct: 428 ITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEE------- 480

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS- 305
                RN          IK G E   H S  ++D+  + G  + AE +      R+  S 
Sbjct: 481 ----GRNYFALMAKSYGIKPGTE---HYS-CMIDLLGRAGLFEEAENLLDRAECRNDASL 532

Query: 306 WNVMIAGYGQKYQSTKAIELLQRM--KSCGFEPDEVTSI----NMLVACVRSGD 353
           W V++   G    +T A  + +R+  +    EP    S     NM  A  R GD
Sbjct: 533 WGVLL---GPCAANTDASSIAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGD 583


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 198/630 (31%), Positives = 337/630 (53%), Gaps = 52/630 (8%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KN    N ++S + K G    A  +F+ M E   V++T ++ G  ++++  EA  ++  M
Sbjct: 72  KNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADM 131

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
            R  +  D V+L ++L              F + + K   NV   Q+H   IKLG+E +L
Sbjct: 132 RRGGIEPDYVTLVTLLSG------------FGELETK---NV-IVQIHTHVIKLGYEYNL 175

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            + NSL+D Y K   +  A  +F ++  +  V++N ++ GY  +  + +AIEL   + + 
Sbjct: 176 MVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNS 235

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGRE--------------------------------- 359
           G +P + T   +L A V   D K G++                                 
Sbjct: 236 GIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEV 295

Query: 360 --MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
             +F  MP     S+N +++SY+ +   KE+  LFR++QF      +   A +LS   + 
Sbjct: 296 GKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSS 355

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
             L  G+Q+H  ++   ++ ++ V + L+ +Y+KC  ++ A+++F  I     V W +MI
Sbjct: 356 LNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMI 415

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
           +         E    F  MR+  +   Q +FA++L +CA L+S   GRQ+H+ + + G++
Sbjct: 416 SAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFM 475

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           ++++ GSAL++ Y KCG +  A + F  M  +N+V+WN +I  YAQNG  D  +  ++ M
Sbjct: 476 SNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQM 535

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           I SG KPD ++F+++L+ACSH G V+  +  FNSM   + V P  +HYT M+D L R G 
Sbjct: 536 IQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGR 595

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL-DPKNSAPYSLLAN 716
           F EAE L+ EMP +   ++W  +L+SCR+H N  LAK+AA+ LF + D +++APY  ++N
Sbjct: 596 FDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSN 655

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           IY+  G+WD++  V++ M +  + K PAYS
Sbjct: 656 IYAVAGQWDNVAKVKKAMRDRGVRKVPAYS 685



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 166/648 (25%), Positives = 285/648 (43%), Gaps = 94/648 (14%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           L+ AHI++ G   +T   N  +  + +  +   A  +FD+MP K+  S N ++S   K  
Sbjct: 29  LIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFG 88

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
            L  A +LFD M ER  VSW  LI   +++   ++A  +Y  M   G  P ++TL ++  
Sbjct: 89  KLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLS 148

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
               L       + H  VIK+G + N+ V N+L+  Y K      A  +F+ M   + VT
Sbjct: 149 GFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVT 208

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           F ++M+G +      EA+E+F  +    +     + +++L           S      D 
Sbjct: 209 FNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALL-----------SAAVGLDDT 257

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
           KF     GQQVH   +K  F  ++ + N+LLD Y+K+  +D    +F  +PE   +S+NV
Sbjct: 258 KF-----GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNV 312

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--------- 359
           +I  Y    Q  ++ +L ++++   F+  +     +L     S +++ GR+         
Sbjct: 313 VITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVG 372

Query: 360 --------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                     +FD++   S   W AM+S+Y Q   H+E I +F 
Sbjct: 373 ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFS 432

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           +M+  GV  D+ T A IL +CA +  +  G+Q+H+  +++    + Y  S L+  Y+KC 
Sbjct: 433 DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
               A + F  +PE + V WN++I+  + N         F+QM Q+   P   SF +VLS
Sbjct: 493 CMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           +C+                                    CG +  A   F+ M     VT
Sbjct: 553 ACS-----------------------------------HCGFVEEALWHFNSMTQIYEVT 577

Query: 574 -----WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
                +  M+    +NG  DEA +L  +M     +P +I + ++L +C
Sbjct: 578 PKREHYTSMVDVLCRNGRFDEAEKLMTEM---PFEPSEIMWSSVLNSC 622



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 183/419 (43%), Gaps = 69/419 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   +  G   ++ + N L+++Y+KCN    AQ +FD +               CK
Sbjct: 361 GRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA--------------CK 406

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S                  V W  +ISA V+ G  E+ ++V++ M   G      T AS+
Sbjct: 407 S-----------------TVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASI 449

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A   L  +  GR+ H L+I+ G   N+Y  +ALL  YAKCG    A+  F EM E N 
Sbjct: 450 LRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNS 509

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A++S  A+   V   L  F+ MI+     DSVS  SVL  C+   CG   +     
Sbjct: 510 VSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSH--CGFVEEALWHF 567

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVS 305
           ++         Q++ +T K       H + S++D+  +NG  D AE + + +P E S + 
Sbjct: 568 NSM-------TQIYEVTPKRE-----HYT-SMVDVLCRNGRFDEAEKLMTEMPFEPSEIM 614

Query: 306 WNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINM----LVACVRSGDIKTGR 358
           W+ ++     +     + KA + L  M+      D    INM     VA       K  +
Sbjct: 615 WSSVLNSCRIHKNHELAKKAADRLFNMEDL---RDAAPYINMSNIYAVAGQWDNVAKVKK 671

Query: 359 EMFD----SMPSPSVSSWNAMLSSYSQSE-NHKEAIKLFR-------EMQFRGVKPDRT 405
            M D     +P+ S          +S ++ +H E  K+ R       EM+ +G KPD T
Sbjct: 672 AMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTT 730



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 66/333 (19%)

Query: 400 VKPDRTTL---AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
           +KP R TL    ++ +S A    L S   + A  +KT  + +   ++  +  +   +R +
Sbjct: 1   MKPYRATLFQNLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNF--LERGD 58

Query: 457 L--AERVFHRIPELDIVCWNSMIAG-LSLNSL---------------------------- 485
           L  A +VF ++P  + +  N MI+G L    L                            
Sbjct: 59  LVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQS 118

Query: 486 --DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               EAF  +  MR+  + P   +  T+LS   +L +     Q+H  + K GY  ++ V 
Sbjct: 119 NQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVC 178

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           ++L++ YCK   +Y A Q F  M  K+TVT+N ++ GY+  G  +EA+ L+ ++  SG+K
Sbjct: 179 NSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIK 238

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV-------------EPILDHYTCMID 650
           P D TF A+L+A        VG++     Q  HG                +LD+Y+    
Sbjct: 239 PSDFTFAALLSAA-------VGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYS---- 287

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
              +     E   L  EMP + D + + V+++S
Sbjct: 288 ---KHDQVDEVGKLFXEMP-ELDGISYNVVITS 316


>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
          Length = 788

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 196/623 (31%), Positives = 317/623 (50%), Gaps = 84/623 (13%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D+ +     ++    K G    AV ++E+    +   FTA +SG  + +    AL +FR 
Sbjct: 177 DRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGVFRK 236

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EA 270
           M+   V  + +++  ++  C   G           +   + ++ G     L IK  F E+
Sbjct: 237 MLSCRVRPNGITIVCMIKACVGAG-----------EFGLALSIVG-----LAIKSNFFES 280

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
            + + NSL+ +Y + GD  +A  +F  +  + VVSW  ++  Y +               
Sbjct: 281 SIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSE--------------- 325

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                               SGD+   R + D+MP  +  SW  +++ + Q  N  EA+K
Sbjct: 326 --------------------SGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVK 365

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           L+ +M   G +P+ +  + +LS+CA++  L  G ++HA SLK  S  + +V+  LI +Y 
Sbjct: 366 LYSQMLADGCRPNISCFSSVLSACASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYC 425

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-------------- 496
           KC +   A+ +F  +P+ +IVCWNS+++G S N   +EA   FK+M              
Sbjct: 426 KCNKCGDAQTIFDTLPQKNIVCWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISG 485

Query: 497 -RQNEMY----------------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
             QN  +                P + +F++VL +CA L S   G+  HA+  K G    
Sbjct: 486 YAQNRQFVDALKSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEES 545

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           IF+G+AL +MY K GD+  +++ F  M  +N VTW  MI G A+NG+ +E++ L++DM+A
Sbjct: 546 IFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLFEDMMA 605

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
           +G+ P++ TF+A+L ACSH GLV+  +  F+ MQ   G+ P   HYTCM+D L RAG   
Sbjct: 606 TGMTPNEHTFLALLFACSHGGLVEQAIHYFDKMQA-LGISPKEKHYTCMVDVLARAGRLA 664

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           EAE L+ + P K +   W  LLS+C  + N  +A+RAA+ L  L   N+A Y LL+N+Y+
Sbjct: 665 EAEALLMKTPSKSEANSWAALLSACNTYRNEEIAERAAKRLHELAKDNTAGYVLLSNMYA 724

Query: 720 SLGRWDDLRAVRELMSENCIVKD 742
           S GRW D   +R LM    + KD
Sbjct: 725 SCGRWKDAARIRVLMKGTTLKKD 747



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 231/460 (50%), Gaps = 35/460 (7%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N LI LY +  +  +A+ +FD+M  KD+ SW A+L    +S DL+ A ++ D MPERN V
Sbjct: 286 NSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEV 345

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  LI+   + G   +A+ +Y++M  +G  P     +SV  A  +L D+  G R H   
Sbjct: 346 SWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACASLEDLRGGARIHARS 405

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K+G   N++V+ +L+ +Y KC     A  +F+ + + N V + +++SG +   ++VEA+
Sbjct: 406 LKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNIVCWNSLVSGYSYNGKMVEAM 465

Query: 207 EMFRLMIRKAVS---------------IDSV-SLSSVLGVCAREGCGVESDVFAQSDNKF 250
            +F+ M  + ++               +D++ S +++L      G    S V     N  
Sbjct: 466 YLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAMLASGQVPGEITFSSVLLACANLC 525

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
           S  V G+  H  TIKLG E  + +  +L DMYAK+GD+ S++ +F  +PER+ V+W  MI
Sbjct: 526 SL-VTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMI 584

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP----S 366
            G  +   + ++I L + M + G  P+E T + +L AC   G ++     FD M     S
Sbjct: 585 QGLAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFDKMQALGIS 644

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE----S 422
           P    +  M+   +++    EA  L  +      K +  + A +LS+C      E    +
Sbjct: 645 PKEKHYTCMVDVLARAGRLAEAEALLMKTP---SKSEANSWAALLSACNTYRNEEIAERA 701

Query: 423 GKQVHA-ASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            K++H  A   TA ++       L  +Y+ C R + A R+
Sbjct: 702 AKRLHELAKDNTAGYVL------LSNMYASCGRWKDAARI 735



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/573 (24%), Positives = 248/573 (43%), Gaps = 117/573 (20%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYS----------------------------------K 35
           LHAH +R+G+  D  + + L+  Y+                                  K
Sbjct: 102 LHAHAVRSGVAADRSVASHLLTTYAAFARAAERDRAFGDCVAADAASPFAYDFMVSEHVK 161

Query: 36  CNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISAL 95
             +  SA+ LFD MP + + S+  ++ A  K   +  A +L+++ P  +V  +   IS  
Sbjct: 162 AGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGF 221

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKN 154
           VRN L   AL V+ KM +    P  IT+  + KA     +        GL IK    + +
Sbjct: 222 VRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLALSIVGLAIKSNFFESS 281

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEE-------------------------------MSE 183
           I V N+L++LY + G    A  VF+E                               M E
Sbjct: 282 IEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPE 341

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            NEV++  +++   +     EA++++  M+      +    SSVL  CA           
Sbjct: 342 RNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACA----------- 390

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
           +  D +      G ++H  ++K+G   ++ +S SL+DMY K      A+ IF  LP++++
Sbjct: 391 SLEDLR-----GGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNI 445

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           V WN +++GY    +  +A+ L ++                                   
Sbjct: 446 VCWNSLVSGYSYNGKMVEAMYLFKK----------------------------------- 470

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           MP+ +++SWN ++S Y+Q+    +A+K F  M   G  P   T + +L +CA +  L +G
Sbjct: 471 MPARNLASWNTIISGYAQNRQFVDALKSFNAMLASGQVPGEITFSSVLLACANLCSLVTG 530

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           K  HA ++K       ++ + L  +Y+K    + ++R+F+++PE + V W +MI GL+ N
Sbjct: 531 KMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAEN 590

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
               E+ + F+ M    M P + +F  +L +C+
Sbjct: 591 GFAEESILLFEDMMATGMTPNEHTFLALLFACS 623



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 154/307 (50%), Gaps = 17/307 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA  L+ G   + F+   LI++Y KCN    AQ +FD +P K+I  WN+++S    
Sbjct: 398 GARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNIVCWNSLVSGYSY 457

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +  +  A  LF +MP RN+ SWN +IS   +N     AL  +N M   G VP  IT +SV
Sbjct: 458 NGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAMLASGQVPGEITFSSV 517

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L  +  G+  H   IK+G++++I++  AL  +YAK G  + +  +F +M E N+
Sbjct: 518 LLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERND 577

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+TAM+ GLA+     E++ +F  M+   ++ +  +  ++L  C+  G      +  Q+
Sbjct: 578 VTWTAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSHGG------LVEQA 631

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV-S 305
            + F +             LG          ++D+ A+ G +  AE +    P +S   S
Sbjct: 632 IHYFDK----------MQALGISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKSEANS 681

Query: 306 WNVMIAG 312
           W  +++ 
Sbjct: 682 WAALLSA 688



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 62/118 (52%), Gaps = 4/118 (3%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK+ HA  ++ G+ +  F+   L ++Y+K  +  S++ +F +MP ++  +W A++   
Sbjct: 528 VTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGL 587

Query: 65  CKSDDLEFAYKLFDEMPERNVV----SWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
            ++   E +  LF++M    +     ++  L+ A    GL E+A+  ++KM   G  P
Sbjct: 588 AENGFAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFDKMQALGISP 645



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 32/167 (19%)

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY----------- 594
           ++  + K GDI  AR+ FD M  +  V++  M+    + G   EAV LY           
Sbjct: 155 MVSEHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 214

Query: 595 --------------------KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
                               + M++  V+P+ IT V ++ AC  +G   + + I      
Sbjct: 215 TATISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLALSIVGLAIK 274

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            +  E  ++    +I    R G    A  + DEM  K D V W  LL
Sbjct: 275 SNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVK-DVVSWTALL 320


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 226/722 (31%), Positives = 370/722 (51%), Gaps = 62/722 (8%)

Query: 65  CKSDDLEFAYKLFDEMPERNV-VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
           C  D     Y L DE+P R+  V  N ++    R G+  + L  ++     G +    TL
Sbjct: 44  CLRDPPGARYPL-DEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATL 102

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + V KA  ++ D   G + H L +K G D+  +    +L+ +Y KCG     + VFE M 
Sbjct: 103 SCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMP 162

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           + N VT+T++++G A      E + +F  M  + +  +  + +SVL   A +G     D+
Sbjct: 163 KKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQG---ALDL 219

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        GQ+VH  ++K G  + + + NSL++MYAK G ++ A+ +F+ +  R 
Sbjct: 220 -------------GQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRD 266

Query: 303 VVSWNVMIAGY--------------------GQKYQST-----------KAIELLQRMKS 331
           +VSWN ++AG                     G+  QST           K + L +++ S
Sbjct: 267 MVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHS 326

Query: 332 C----GFEPDEVTSINMLVACVRSGDIKTGREMFD-SMPSPSVSSWNAMLSSYSQSENHK 386
           C    GF         +  A  + G++     +F  +  S +V SW A++S   Q+ +  
Sbjct: 327 CVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIP 386

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
            A+ LF  M+   V P+  T + +L   A++ IL    Q+HA  +KT      +V + L+
Sbjct: 387 LAVVLFSRMREDRVMPNEFTYSAMLK--ASLSILPP--QIHAQVIKTNYQHIPFVGTALL 442

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQ 505
             YSK    E A  +F  I + D+V W++M++     + D E A   F +M    + P +
Sbjct: 443 ASYSKFGSTEDALSIFKMIEQKDVVAWSAMLS-CHAQAGDCEGATYLFNKMAIQGIKPNE 501

Query: 506 FSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           F+ ++V+ +CA  S+   QGRQ HA   K  Y + I V SAL+ MY + G+I  A+  F+
Sbjct: 502 FTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFE 561

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
               ++ V+WN MI GYAQ+GY  +A+  ++ M ASG++ D +TF+A++  C+H+GLV  
Sbjct: 562 RQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVE 621

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G + F+SM  DH + P ++HY CM+D   RAG   E   LI +MP     ++W  LL +C
Sbjct: 622 GQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGAC 681

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           R+H NV L K +A++L  L+P +S+ Y LL+NIY++ G+W +   VR+LM    + K+  
Sbjct: 682 RVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAG 741

Query: 745 YS 746
            S
Sbjct: 742 CS 743



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 109/456 (23%), Positives = 192/456 (42%), Gaps = 88/456 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA  ++ G     F+CN L+ +Y+KC     A         K +++W         
Sbjct: 220 GQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDA---------KSVFNW--------- 261

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        M  R++VSWN L++ L  N  E +AL ++++        T  T A+V
Sbjct: 262 -------------METRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATV 308

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EPN 185
            K    L  +   R+ H  V+K G      V  AL   Y+KCG    A+ +F   +   N
Sbjct: 309 IKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRN 368

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++TA++SG  +   +  A+ +F  M    V  +  + S++L                 
Sbjct: 369 VVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML----------------- 411

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
              K S ++   Q+H   IK  ++    +  +LL  Y+K G  + A  IF  + ++ VV+
Sbjct: 412 ---KASLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVA 468

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           W+ M++ + Q      A  L  +M   G +P+E T  +++ AC                 
Sbjct: 469 WSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAIS 528

Query: 350 --------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               R G+I + + +F+      + SWN+M+S Y+Q     +AI
Sbjct: 529 IKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAI 588

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           + FR+M+  G++ D  T   ++  C   G++  G+Q
Sbjct: 589 ETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQ 624



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 47/291 (16%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA +++       F+   L+  YSK  +T  A  +F  +  KD+ +W+A+LS   ++ D
Sbjct: 422 IHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGD 481

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
            E A  LF                               NKM+ +G  P   T++SV  A
Sbjct: 482 CEGATYLF-------------------------------NKMAIQGIKPNEFTISSVIDA 510

Query: 130 -STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
            +     V+ GR+ H + IK      I V++AL+S+Y++ G    A  VFE  ++ + V+
Sbjct: 511 CACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVS 570

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           + +M+SG A+    ++A+E FR M    + +D V+  +V+  C   G  VE   +     
Sbjct: 571 WNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQY----- 625

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
            F   V   +++           +     ++D+Y++ G +D    +  ++P
Sbjct: 626 -FDSMVRDHKIN---------PTMEHYACMVDLYSRAGKLDETMSLIRDMP 666



 Score = 42.4 bits (98), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 4/109 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  HA  ++    D   + + L+ +YS+  N  SAQ +F++   +D+ SWN+++S   +
Sbjct: 521 GRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQ 580

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
                 A + F +M    +    V++  +I     NGL  +    ++ M
Sbjct: 581 HGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSM 629


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 188/475 (39%), Positives = 286/475 (60%), Gaps = 17/475 (3%)

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK-AIELLQRMKSCG 333
           SN ++  + ++GD++SA  +F ++  ++ V+WN M+AGY  +    K A +L  R+    
Sbjct: 8   SNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIP--- 64

Query: 334 FEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
            EPD + S N+++AC + + D+++ R  FD MP    +SWN M+S +SQ+    +A +LF
Sbjct: 65  -EPD-IFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELF 122

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSK 451
             M  R    +  +   ++S     G +ESG    A  L   + + + VA + +I  + K
Sbjct: 123 LVMPVR----NSVSWNAMIS-----GYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMK 173

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
             + ELAE+ F  +P  ++V WN+MIAG   N         FK+M ++   P   S ++V
Sbjct: 174 FGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSV 233

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L  C+ LS+   G+QVH  I K     +I  G++L+ MYCKCGD+  A + F +M  K+ 
Sbjct: 234 LLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDV 293

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           VTWN MI GYAQ+G G++A+ L+  M   G+KPD ITFVA+L+AC+H+G VD+G+E FNS
Sbjct: 294 VTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNS 353

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M  D+GVE   DHYTC++D LGR G   EA  LI +MP K    I+  LL +CR+H N+ 
Sbjct: 354 MVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLE 413

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LA+ AA+ L  LDP+++A Y  LAN+Y+++ RWD +  VR  M +N ++K P YS
Sbjct: 414 LAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYS 468



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 192/398 (48%), Gaps = 33/398 (8%)

Query: 23  TFLCNRLIELYS-KCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           T   N ++  YS +      A+ LFD++P  DI+S+N +L+    + D+E A   FD+MP
Sbjct: 36  TVTWNSMLAGYSNRRGKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMP 95

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
            ++  SWN +IS   +NG+ ++A  ++  M     V  +  ++   ++     D++  ++
Sbjct: 96  VKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESG----DLDLAKQ 151

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
               + ++   +++    A+++ + K G  + A   FEEM   N VT+ AM++G  +  +
Sbjct: 152 ----LFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQ 207

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
               L++F+ M+      +  SLSSVL  C+                  S    G+QVH 
Sbjct: 208 AENGLKLFKRMVESGFRPNPSSLSSVLLGCS----------------NLSALKLGKQVHQ 251

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
           L  K     ++    SLL MY K GD++ A  +F  +P++ VV+WN MI+GY Q     K
Sbjct: 252 LICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEK 311

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-----PSPSVSSWNAML 376
           A+ L  +M+  G +PD +T + +L AC  +G +  G E F+SM            +  ++
Sbjct: 312 ALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVV 371

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               +     EA+ L ++M F   KP       +L +C
Sbjct: 372 DLLGRGGKLVEAVDLIKKMPF---KPHSAIFGTLLGAC 406



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 31/245 (12%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL----------- 70
           DT   N +I  +S+      A+ LF  MP ++  SWNA++S   +S DL           
Sbjct: 98  DTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAP 157

Query: 71  --------------------EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
                               E A K F+EMP +N+V+WN +I+  + N   E  L ++ +
Sbjct: 158 VRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKR 217

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M   GF P   +L+SV    + L  ++ G++ H L+ K  +  NI    +LLS+Y KCG 
Sbjct: 218 MVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGD 277

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            + A  +F  M + + VT+ AM+SG A+     +AL +F  M  + +  D ++  +VL  
Sbjct: 278 LEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSA 337

Query: 231 CAREG 235
           C   G
Sbjct: 338 CNHAG 342



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 37/219 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  I ++ +  +      L+ +Y KC +   A  LF  MP KD+ +WNA++S   +
Sbjct: 246 GKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQ 305

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                          +G  EKAL +++KM +EG  P  IT  +V
Sbjct: 306 -------------------------------HGAGEKALYLFDKMRDEGMKPDWITFVAV 334

Query: 127 FKASTALLDVEHG-RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EP 184
             A      V+ G    + +V   G++        ++ L  + G    AV + ++M  +P
Sbjct: 335 LSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKP 394

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +   F  ++       R+ + LE+     +  +++D  S
Sbjct: 395 HSAIFGTLLGAC----RIHKNLELAEFAAKNLLNLDPES 429



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 17/173 (9%)

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           +++   + +I  + + GD+  A + F+ M  K TVTWN M+ GY+      +  R   D 
Sbjct: 3   SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDR 62

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD--HYTCMIDCLGRA 655
           I    +PD  ++  +L    H+  V+     F+ M       P+ D   +  MI    + 
Sbjct: 63  IP---EPDIFSYNIMLACYLHNADVESARLFFDQM-------PVKDTASWNTMISGFSQN 112

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           G   +A  L   MP ++  V W  ++S      ++ LAK    +LF + P  S
Sbjct: 113 GMMDQARELFLVMPVRNS-VSWNAMISGYVESGDLDLAK----QLFEVAPVRS 160


>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
          Length = 1167

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 230/779 (29%), Positives = 367/779 (47%), Gaps = 123/779 (15%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            GK +H  ++++G   D FL   LI +Y+   N                            
Sbjct: 465  GKSIHGFVVKSGFSSDEFLTPALISMYAGGGN---------------------------- 496

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               L  A  LFD   E+NVV WN++ISA  +N    +A  ++ +M      P  +T  S+
Sbjct: 497  ---LFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSI 553

Query: 127  FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                    +   G+  H  V+K  LD  + VA ALLS+YAK             + + N 
Sbjct: 554  IPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAK-------------LGDXNS 600

Query: 187  VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
              F                  +F  M RK    DS+            G G+ S      
Sbjct: 601  AXF------------------IFYQMPRKTSYRDSMI----------SGYGIMS------ 626

Query: 247  DNKFSRNVHGQQVHC-LTIKLG--FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                 R     ++   L IK G  F++ L++SN+LL  Y+  G + S+  +F  +P R+ 
Sbjct: 627  ---MGRPFFWVRLLMHLAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNA 683

Query: 304  VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------- 348
            +SWN +I+G      + KA+ LL +M+    E D VT I+++  C               
Sbjct: 684  ISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGY 743

Query: 349  --------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                   GDI  G+ +F+ MP  S+ SWNA+++ Y       E 
Sbjct: 744  AIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEV 803

Query: 389  IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
            +  F +M   G KP+  TL  +L SC     L  GK +HA +++T   ++  + + LI +
Sbjct: 804  MASFCQMIXEGQKPNYVTLLNLLPSCXT---LLQGKSIHAFAVRTGVIVETPIITSLISM 860

Query: 449  YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
            Y++ +       +F    + DI  WN++++         E+  FF ++    + P   +F
Sbjct: 861  YARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITF 920

Query: 509  ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
             +++S+C +LSS      V A + + G+   I + +ALI+++ +CG+I  A++ F+ +  
Sbjct: 921  LSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSS 980

Query: 569  KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            K+ V+W+ MI+GY  +G  + A+ L   M  SG+KPD IT+ ++L+ACSH G +D G  I
Sbjct: 981  KDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMI 1040

Query: 629  FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
            FNSM ++ GV   ++HY CM+D LGR G  +EA   ++++PCK    + E LL +C +H 
Sbjct: 1041 FNSM-VEEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLXACIIHG 1099

Query: 689  NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            NV+L ++    LF LDPKNS  Y +L NIY++ GRW D   VR  M E  + K P +SL
Sbjct: 1100 NVKLGEKICSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSL 1158



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/641 (25%), Positives = 302/641 (47%), Gaps = 27/641 (4%)

Query: 58   NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
             A++    K+  +  A  + D++ + ++V+WN LIS    NG +++   V  ++   G  
Sbjct: 384  TALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLK 443

Query: 118  PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
            P   T AS+    T +  ++ G+  HG V+K G   + ++  AL+S+YA  G    A  +
Sbjct: 444  PNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDL 503

Query: 178  FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
            F+  +E N V + +M+S  A+  +  EA +MF+ M++  +  + V+  S++  C      
Sbjct: 504  FDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCC------ 557

Query: 238  VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                    S N +     G+ +H   +K   ++ L ++ +LL MYAK GD +SA  IF  
Sbjct: 558  ------ENSANFWX----GKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQ 607

Query: 298  LPERSVVSWNVMIAGYGQKYQSTKA--IELLQRMK-SCGFEPDEVTSI-NMLVACVRS-G 352
            +P ++    + MI+GYG          + LL  +    G E D   +I N L+A     G
Sbjct: 608  MPRKTSYR-DSMISGYGIMSMGRPFFWVRLLMHLAIKTGKEFDSXLNISNALLAFYSDCG 666

Query: 353  DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
             + +  ++F  MP  +  SWN ++S    + + K+A+ L  +MQ   ++ D  TL  I+ 
Sbjct: 667  KLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIP 726

Query: 413  SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
             C     L  G  +H  ++KT    D  + + LI +Y  C      + +F  +P   IV 
Sbjct: 727  ICRVXENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVS 786

Query: 473  WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
            WN++I G   + L  E    F QM      P   +   +L SC  L    QG+ +HA   
Sbjct: 787  WNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSCXTL---LQGKSIHAFAV 843

Query: 533  KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVR 592
            + G + +  + ++LI MY +  +I      F+M   ++   WN ++  Y Q     E+V 
Sbjct: 844  RTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVT 903

Query: 593  LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
             + +++ + V+PD ITF+++++AC     +++   +  +  +  G +  +     +ID  
Sbjct: 904  FFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVM-AYVIQKGFDKHIVISNALIDLF 962

Query: 653  GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
             R G+   A+ + + +  K D V W  +++   LH +   A
Sbjct: 963  ARCGNISIAKKIFEGLSSK-DAVSWSTMINGYGLHGDSEAA 1002



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 164/633 (25%), Positives = 299/633 (47%), Gaps = 59/633 (9%)

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
           E A   F+ + + +V   N +I  L  +GL E  L VY K    G      T   V KA 
Sbjct: 296 ELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKAC 355

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
           +AL  V      H +V++   ++N+ +  AL+  YAK G    A  V +++S+P+ VT+ 
Sbjct: 356 SALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWN 415

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           A++SG +      E  E+ R ++   +  +  + +S++ +C R  C    D+        
Sbjct: 416 ALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKC---LDI-------- 464

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
                G+ +H   +K GF +D  L+ +L+ MYA  G++  A  +F +  E++VV WN MI
Sbjct: 465 -----GKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMI 519

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS---- 366
           + Y Q  +S++A ++ Q+M     +P+ VT ++++  C  S +   G+ +   +      
Sbjct: 520 SAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLD 579

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ- 425
             +S   A+LS Y++  +   A  +F +M      P +T+     S  +  GI+  G+  
Sbjct: 580 SQLSVATALLSMYAKLGDXNSAXFIFYQM------PRKTSYRD--SMISGYGIMSMGRPF 631

Query: 426 ------VHAASLKTASHIDNY--VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
                 +H A +KT    D+   +++ L+  YS C +   + ++F ++P  + + WN++I
Sbjct: 632 FWVRLLMHLA-IKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLI 690

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
           +G   N    +A     +M+Q +M     +  +++  C    +  QG  +H    K G+ 
Sbjct: 691 SGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFA 750

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
            D+ + +ALI MY  CGDI   +  F++M  ++ V+WN +I GY  +   +E +  +  M
Sbjct: 751 CDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQM 810

Query: 598 IASGVKPDDITFVAILTACS--------HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           I  G KP+ +T + +L +C         H+  V  GV +           PI+   T +I
Sbjct: 811 IXEGQKPNYVTLLNLLPSCXTLLQGKSIHAFAVRTGVIV---------ETPII---TSLI 858

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
               R  + +    L  EM  K+D  +W  ++S
Sbjct: 859 SMYARFENINSFIFLF-EMGGKEDIALWNAIMS 890



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 169/335 (50%), Gaps = 1/335 (0%)

Query: 337 DEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           DE      +++C   G  +     F+++  PSV   N M+         ++ + ++ + +
Sbjct: 278 DEYVVAEFIISCFHLGAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCR 337

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
             G   D  T   ++ +C+A+G +   + VH   L+TA   +  + + L+  Y+K  R  
Sbjct: 338 VLGCPSDDFTFPFVIKACSALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMV 397

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A  V  +I + D+V WN++I+G SLN  D E F   +Q+ +  + P   +FA+++  C 
Sbjct: 398 KARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCT 457

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
           ++     G+ +H  + K G+ +D F+  ALI MY   G+++ AR  FD    KN V WN 
Sbjct: 458 RMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNS 517

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDH 636
           MI  YAQN    EA ++++ M+ + ++P+ +TFV+I+  C +S     G  + ++  + +
Sbjct: 518 MISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSL-HAHVMKY 576

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
            ++  L   T ++    + G  + A  +  +MP K
Sbjct: 577 RLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRK 611



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 211/478 (44%), Gaps = 64/478 (13%)

Query: 5    VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
            + G  LH + ++ G   D  L N LI +Y  C + ++ + LF                  
Sbjct: 735  IQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLF------------------ 776

Query: 65   CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                         + MP R++VSWN LI+    + L+ + ++ + +M  EG  P ++TL 
Sbjct: 777  -------------EVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLL 823

Query: 125  SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            ++  +   LL    G+  H   ++ G+     +  +L+S+YA+       + +FE   + 
Sbjct: 824  NLLPSCXTLL---QGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKE 880

Query: 185  NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
            +   + A+MS   +T    E++  F  ++   V  D ++  S++  C +           
Sbjct: 881  DIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLS--------- 931

Query: 245  QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                  S N+    V    I+ GF+  + +SN+L+D++A+ G++  A+ IF  L  +  V
Sbjct: 932  ------SLNL-SNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAV 984

Query: 305  SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
            SW+ MI GYG    S  A+ LL +M+  G +PD +T  ++L AC   G I  G  +F+SM
Sbjct: 985  SWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSM 1044

Query: 365  PSPSVSS----WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                V      +  M+    ++    EA     ++     KP  + L  +L +C   G +
Sbjct: 1045 VEEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLP---CKPSVSLLESLLXACIIHGNV 1101

Query: 421  ESGKQVHAASLK-----TASHIDNYVASGLIGIYSKCQ--RNELAERVFHRIPELDIV 471
            + G+++ +   +     + S++  Y      G +      R+++ ER   +IP   +V
Sbjct: 1102 KLGEKICSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLV 1159


>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
 gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 201/642 (31%), Positives = 322/642 (50%), Gaps = 56/642 (8%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H  ++  GL +++  +  L+SLY   G    A  VF+ +  P+ +++  ++         
Sbjct: 25  HAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEF 84

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV-HGQQVHC 261
            + +  +  M       D+V  S VL  C+                  SRN   G++VHC
Sbjct: 85  RDIVGFYNRMRVCLKECDNVVFSHVLKACSE-----------------SRNFDEGRKVHC 127

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
             +K G   D  +   L+DMYAK G+++ +  +F    +R+V SW+ MIAGY Q   +  
Sbjct: 128 QIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQD 186

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVAC--------------------------------- 348
            + L  RM+    E +++T   ++ AC                                 
Sbjct: 187 GLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLD 246

Query: 349 --VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
              + G ++  R +FD +    + SW AM+  Y+Q+   +EA+KLF + +   V P+  T
Sbjct: 247 LYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVT 306

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
           +A + SSC+ +  L  G+ +H  S+K  S  D  V + L+  Y+KCQ N  A  VF  I 
Sbjct: 307 IASVFSSCSQLLNLNLGRSIHGLSIKLGSR-DPIVTNSLVDFYAKCQMNRDARYVFETIS 365

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
           + D+V WNS+I+  S N    EA   F QMR   + P   +  +VLS+CA L++   G  
Sbjct: 366 DRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSS 425

Query: 527 VHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
            HA   K G ++ +++VG+AL+  Y KCGD   AR  FD M  K+TVTW+ MI GY   G
Sbjct: 426 FHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQG 485

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
            G  ++ ++ DM+ + +KP++  F +IL+ACSH+G++  G  +F  +  D+ + P   HY
Sbjct: 486 NGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHY 545

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
           TCM+D L RAG   EA   I +MP + D  ++   L  C LH+   L + A + +  L P
Sbjct: 546 TCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHP 605

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            ++  Y L+ N+Y+S  RW  ++ VRELM +  ++K P  SL
Sbjct: 606 GDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSL 647



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 216/469 (46%), Gaps = 38/469 (8%)

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           ++H   +  G   DL  S  L+ +Y   G +D A ++F  +P    +SW V+I  Y    
Sbjct: 23  EMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNS 82

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS-------------------------- 351
           +    +    RM+ C  E D V   ++L AC  S                          
Sbjct: 83  EFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNPDSFVFTG 142

Query: 352 --------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                   G+I+  R +FD     +V SW++M++ Y Q+   ++ + LF  M+   ++ +
Sbjct: 143 LVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEAN 202

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
           + TL I++ +C  +G L  GK +H   +K    + +Y+ + L+ +Y+KC     A  VF 
Sbjct: 203 QITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFD 262

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            +  +DIV W +MI G + N    EA   F Q  Q  + P   + A+V SSC++L +   
Sbjct: 263 ELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNL 322

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           GR +H    K G   D  V ++L++ Y KC     AR  F+ +  ++ V WN +I  ++Q
Sbjct: 323 GRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQ 381

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
           NG   EA+ L+  M    V PD +T V++L+AC+    + VG   F++  +  G+     
Sbjct: 382 NGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSS-FHAYAVKRGLLSSNV 440

Query: 644 HY-TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           +  T ++    + G    A ++ D M  K   V W  ++S   +  N R
Sbjct: 441 YVGTALLTFYAKCGDAESARVIFDGMDQK-STVTWSAMISGYGIQGNGR 488



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 203/412 (49%), Gaps = 53/412 (12%)

Query: 48  KMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSV 107
           K  + D + +  ++    K  ++E +  +FDE  +RNV SW+++I+  V+N L +  L +
Sbjct: 131 KFGNPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVL 190

Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
           +N+M  E      ITL  +  A   L  +  G+  HG +IK G++   Y+  ALL LYAK
Sbjct: 191 FNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAK 250

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
           CG  + A  VF+E+   + V++TAM+ G  +     EAL++F    + AV  + V+++SV
Sbjct: 251 CGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASV 310

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
              C++                 + N+ G+ +H L+IKLG   D  ++NSL+D YAK   
Sbjct: 311 FSSCSQ---------------LLNLNL-GRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQM 353

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
              A  +F  + +R VV+WN +I+ + Q   + +A+EL  +M+     PD VT +++L A
Sbjct: 354 NRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSA 413

Query: 348 C------------------------------------VRSGDIKTGREMFDSMPSPSVSS 371
           C                                     + GD ++ R +FD M   S  +
Sbjct: 414 CASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVT 473

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           W+AM+S Y    N + ++ +F +M    +KP+      ILS+C+  G++  G
Sbjct: 474 WSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEG 525



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 199/415 (47%), Gaps = 57/415 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH ++++ G+   ++L   L++LY+KC     A+ +FD++   DI SW A       
Sbjct: 222 GKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTA------- 274

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I    +NG  E+AL ++ +      +P  +T+ASV
Sbjct: 275 ------------------------MIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASV 310

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F + + LL++  GR  HGL IK+G  ++  V N+L+  YAKC   + A  VFE +S+ + 
Sbjct: 311 FSSCSQLLNLNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDV 369

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + +++S  ++     EALE+F  M   +V  D+V+L SVL  CA             S
Sbjct: 370 VAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACA-------------S 416

Query: 247 DNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            N       G   H   +K G   +++++  +LL  YAK GD +SA VIF  + ++S V+
Sbjct: 417 LNALQV---GSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVT 473

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF---- 361
           W+ MI+GYG +     ++ +   M     +P+E    ++L AC  +G I  G  +F    
Sbjct: 474 WSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMIC 533

Query: 362 -DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
            D    PS   +  M+   +++   KEA+   ++M    V+PD +     L  C 
Sbjct: 534 QDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMP---VQPDVSLFGAFLHGCG 585


>gi|347954460|gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
          Length = 820

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 232/779 (29%), Positives = 362/779 (46%), Gaps = 116/779 (14%)

Query: 6   AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            GK +HA IL+NG     + ++  +L+  Y+KC                           
Sbjct: 77  TGKQIHARILKNGDLYARNEYIETKLVIFYAKC--------------------------- 109

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
               DDLE A  LF ++  RNV SW  +I    R GL E AL  + +M      P +  +
Sbjct: 110 ----DDLEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLCEGALMGFVEMLENEIFPDNFVV 165

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +VFKA  AL     GR  HG V+K GL+  ++VA++L  +Y KCG    A  VF+E+ E
Sbjct: 166 PNVFKACGALQWSRFGRGVHGYVLKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPE 225

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V + A+M G  +     EA+ +   M +  V    V++S+ L   A    GVE    
Sbjct: 226 RNVVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCLSASANMA-GVE---- 280

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G Q H + I  G E D  L  SLL+ Y K G ++ AE+IF  + E+ V
Sbjct: 281 -----------EGTQCHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFEKDV 329

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           V+WN++I+GY Q+     AI + Q M+    + D VT   ++ A  R+ ++K G+E+   
Sbjct: 330 VTWNLLISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCX 389

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           FDS     +  WN +L++Y++S +  EA
Sbjct: 390 CFRHSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHSGEA 449

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           ++LF EMQ   V P+  T  +I+ S           ++  A +  A  +   + S  I  
Sbjct: 450 LRLFYEMQLESVPPNVITWNLIILS-----------RLRNAEVNEAKEMFLQMQSSGI-- 496

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
                            P L  + W +M+ G+  N    EA  F ++M+++ M P  FS 
Sbjct: 497 ----------------TPNL--ISWTTMMNGMVQNGCSEEAIHFLRKMQESGMRPNAFSI 538

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              LS+ A L+S   GR +H  I ++  + +   + ++L++MY KCGDI  A + F+   
Sbjct: 539 TVALSASANLASXHFGRSIHGYIIRNLRHSSSASIETSLVDMYAKCGDINKAERVFESKL 598

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
                 +N MI  YA  G   EAV LY+ +   G KPD ITF ++L+AC+H+G +D  + 
Sbjct: 599 SNELPLYNAMISAYALXGNVTEAVALYRSLEDMGXKPDSITFTSLLSACNHAGDIDQAIR 658

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           +F  M  +HGV+P L+HY  ++D    A    +A  L++EMP K D  + + L++SC   
Sbjct: 659 VFTDMVSNHGVKPCLEHYGLLVDLFASAKETDKALRLMEEMPYKPDXRMIQSLVASCNKQ 718

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
               L    + +L   +P+ S  Y  ++N Y+  G WD++   RE+M    + K P  S
Sbjct: 719 HKTELVDYLSRQLLETEPEXSGNYVTISNAYAVEGSWDEVVKTREMMKAKGLKKKPGCS 777



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 153/660 (23%), Positives = 285/660 (43%), Gaps = 90/660 (13%)

Query: 71  EFAYKLFDEMPER-NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           +  +KL DE P+  +  S+ + +S+L +NG  ++ALS+  +M              + + 
Sbjct: 9   KLXFKLHDEQPQAPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQG 68

Query: 130 STALLDVEHGRRCHGLVIKIG--LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
                D+  G++ H  ++K G    +N Y+   L+  YAKC   + A  +F ++   N  
Sbjct: 69  CVYERDLCTGKQIHARILKNGDLYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRVRNVF 128

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++ A++    +      AL  F  M+   +  D+  + +V   C            A   
Sbjct: 129 SWAAIIGVKCRMGLCEGALMGFVEMLENEIFPDNFVVPNVFKACG-----------ALQW 177

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
           ++F R VHG       +K G E  + +++SL DMY K G +D A  +F  +PER+VV+WN
Sbjct: 178 SRFGRGVHG-----YVLKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWN 232

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-------- 359
            ++ GY Q   + +AI LL  M+  G EP  VT    L A      ++ G +        
Sbjct: 233 ALMVGYVQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCLSASANMAGVEEGTQCHAIAIVN 292

Query: 360 ---------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                      +FD M    V +WN ++S Y Q    ++AI + 
Sbjct: 293 GLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFEKDVVTWNLLISGYVQQGLVEDAIYMC 352

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           + M+   +K D  TLA ++S+ A    L+ GK+V     + +   D  +AS  + +Y+KC
Sbjct: 353 QLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCXCFRHSLESDIVLASTAMDMYAKC 412

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
                A++VF    E D++ WN+++A  + +    EA   F +M+   + P   ++  ++
Sbjct: 413 GSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHSGEALRLFYEMQLESVPPNVITWNLII 472

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
            S  + +   + +++  Q++  G                                  N +
Sbjct: 473 LSRLRNAEVNEAKEMFLQMQSSGIT-------------------------------PNLI 501

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +W  M++G  QNG  +EA+   + M  SG++P+  +    L+A ++      G  I   +
Sbjct: 502 SWTTMMNGMVQNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLASXHFGRSIHGYI 561

Query: 633 --QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
              L H     ++  T ++D   + G  ++AE + +     + P ++  ++S+  L  NV
Sbjct: 562 IRNLRHSSSASIE--TSLVDMYAKCGDINKAERVFESKLSNELP-LYNAMISAYALXGNV 618



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 192/383 (50%), Gaps = 17/383 (4%)

Query: 359 EMFDSMP-SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           ++ D  P +PS +S+   +SS  ++   KEA+ L  EM FR ++        IL  C   
Sbjct: 13  KLHDEQPQAPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYE 72

Query: 418 GILESGKQVHAASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
             L +GKQ+HA  LK       + Y+ + L+  Y+KC   E+AE +F ++   ++  W +
Sbjct: 73  RDLCTGKQIHARILKNGDLYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRVRNVFSWAA 132

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           +I       L   A M F +M +NE++P  F    V  +C  L  S  GR VH  + K G
Sbjct: 133 IIGVKCRMGLCEGALMGFVEMLENEIFPDNFVVPNVFKACGALQWSRFGRGVHGYVLKAG 192

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
             + +FV S+L +MY KCG +  AR+ FD +  +N V WN ++ GY QNG  +EA+RL  
Sbjct: 193 LEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLS 252

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVE-----IFNSMQLDHGVEPILDHYTCMID 650
           DM   GV+P  +T    L+A ++   V+ G +     I N ++LD+ +   L ++ C   
Sbjct: 253 DMRKDGVEPTRVTVSTCLSASANMAGVEEGTQCHAIAIVNGLELDNILGTSLLNFYC--- 309

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
              + G    AEM+ D M  K D V W +L+S       V  A     +L RL+ K    
Sbjct: 310 ---KVGLIEYAEMIFDRMFEK-DVVTWNLLISGYVQQGLVEDAIYMC-QLMRLE-KLKYD 363

Query: 711 YSLLANIYSSLGRWDDLRAVREL 733
              LA + S+  R ++L+  +E+
Sbjct: 364 CVTLATLMSAAARTENLKLGKEV 386


>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g02750-like [Cucumis sativus]
          Length = 741

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 219/725 (30%), Positives = 363/725 (50%), Gaps = 45/725 (6%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
            F  N  I    +      A  +F KM  ++I ++N+++SA  K+  +  A +LFD MP+
Sbjct: 15  VFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
           RN+VSWN++I+  + N L E A  ++++M    F     +   +    T + ++E  R  
Sbjct: 75  RNLVSWNSMIAGYLHNELVEDAARLFDRM----FKRDIYSWTLMITCYTRIGELEKAREL 130

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
             L+      ++    NAL++ YAK    + A  +F+EM   N V++ +++SG  K  ++
Sbjct: 131 FNLLPD---KQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKM 187

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
              L+ F  M  + V   ++ +   +GV   +   +           F + +    V   
Sbjct: 188 QLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWM-----------FFKKIPTPNVVSW 236

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
                         ++L  +A  G M  A  +F+ +P +++VSWN MI  Y ++ Q   A
Sbjct: 237 V-------------TMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDA 283

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
            +L   M     E D V+   M+   VR G +   RE+ + MP  ++++  AM++ Y QS
Sbjct: 284 YKLFMEMP----EKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQS 339

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               EA ++F ++  R    D      +++     G    G+   A  L       + V+
Sbjct: 340 GRMDEANEIFSQISVR----DSVCWNSMIT-----GYAHCGRTDEALRLFQEMVCKDMVS 390

Query: 443 -SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + +I  Y++  + + A  +F+ + E ++V WNS+I G   N L  EA   F  M+Q   
Sbjct: 391 WNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGE 450

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P Q +    L + A L++   G Q+H    K G+ ND+FV +A++ MY K G +  A  
Sbjct: 451 KPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAEN 510

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F  +  K+ V+WN +I GYA NG G EAV L++ M   G+ PD++TF  +L+AC+H G 
Sbjct: 511 VFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGF 570

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           VD G+ +F SM   + ++P  +HY C+I+ LGR G   EA  ++  M       IW  LL
Sbjct: 571 VDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALL 630

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
            +CR+H N+ LAK +AE L  L+P+N++ Y LL+N+++  GRWD +  VR LM EN   K
Sbjct: 631 WACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEK 690

Query: 742 DPAYS 746
            P  S
Sbjct: 691 QPGCS 695



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 250/519 (48%), Gaps = 45/519 (8%)

Query: 5   VAGKLLHAHILRNG--LFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHK-DIYS 56
           +AG  LH  ++ +   LFD     D +    +I  Y++      A+ LF+ +P K D   
Sbjct: 84  IAG-YLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVC 142

Query: 57  WNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
            NA+++   K      A KLFDEM  +NVVSWN+++S   +NG  +  L  +  M     
Sbjct: 143 RNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNV 202

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           V  ++ +         + D++       +  K     N+     +LS +A  G    A  
Sbjct: 203 VSWNLMV----DGYVGVGDLDSA----WMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARN 254

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F EM   N V++ AM+    + +++ +A ++F  M  K    DSVS ++++    R G 
Sbjct: 255 LFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEK----DSVSWTAMINGYVRVG- 309

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                          + +  +++    + L    ++    ++++ Y ++G MD A  IFS
Sbjct: 310 ---------------KLLQAREI----LNLMPYKNIAAQTAMINGYLQSGRMDEANEIFS 350

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            +  R  V WN MI GY    ++ +A+ L Q M  C    D V+   M+ A  ++G +  
Sbjct: 351 QISVRDSVCWNSMITGYAHCGRTDEALRLFQEM-VC---KDMVSWNTMIAAYAQAGQMDK 406

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
             EMF+ M   +V SWN++++ Y Q+  + EA+  F  M+ +G KPD+TT+   L + A 
Sbjct: 407 ALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASAN 466

Query: 417 MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
           +  L  G Q+H  ++KT    D +V + ++ +Y+K  R   AE VF  I   D+V WNS+
Sbjct: 467 LAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSL 526

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
           IAG +LN    EA   F+ M    + P + +F  +LS+C
Sbjct: 527 IAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSAC 565



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 133/247 (53%), Gaps = 1/247 (0%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           D+   N +I  Y+ C  T  A  LF +M  KD+ SWN +++A  ++  ++ A ++F+EM 
Sbjct: 356 DSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQ 415

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
           ERNVVSWN+LI+  V+NGL  +AL+ +  M  +G  P   T+    +AS  L  +  G +
Sbjct: 416 ERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQ 475

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
            H L IK G   +++V NA+L++YAK G    A  VF E+   + V++ ++++G A    
Sbjct: 476 LHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGC 535

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDNKFSRNVHGQQVH 260
             EA+E+F +M  + +  D V+ + +L  C   G   +  ++F      +S     +   
Sbjct: 536 GKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYA 595

Query: 261 CLTIKLG 267
           C+   LG
Sbjct: 596 CVINLLG 602



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH   ++ G  +D F+ N ++ +Y+K      A+++F ++  KD+ SWN++++    
Sbjct: 473 GVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYAL 532

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMS 112
           +   + A +LF+ MP R +    V++  L+SA    G  ++ L+++  M+
Sbjct: 533 NGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMT 582


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 186/598 (31%), Positives = 321/598 (53%), Gaps = 46/598 (7%)

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL-MIRKAVSIDSVSLSSVLGV 230
           K  +  F+ +   +   +  M+SG  +     E +  F L M+   ++ D  +  SVL  
Sbjct: 36  KSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA 95

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           C                      + G ++HCL +K GF  D++++ SL+ +Y++   + +
Sbjct: 96  C-------------------RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGN 136

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A ++F  +P R + SWN MI+GY Q   + +A+ L   +++     D VT +++L AC  
Sbjct: 137 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTE 192

Query: 351 SGDIKTG--------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
           +GD   G                    +++FD M    + SWN+++ +Y  +E    AI 
Sbjct: 193 AGDFNRGVTIHSYSIKHGLESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 252

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY-VASGLIGIY 449
           LF+EM+   ++PD  TL  + S  + +G + + + V   +L+    +++  + + ++ +Y
Sbjct: 253 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 312

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQFSF 508
           +K    + A  VF+ +P  D++ WN++I+G + N    EA   +  M +  E+   Q ++
Sbjct: 313 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 372

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
            +VL +C++  +  QG ++H ++ K+G   D+FV ++L +MY KCG +  A   F  +  
Sbjct: 373 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 432

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            N+V WN +I  +  +G+G++AV L+K+M+  GVKPD ITFV +L+ACSHSGLVD G   
Sbjct: 433 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 492

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F  MQ D+G+ P L HY CM+D  GRAG    A   I  M  + D  IW  LLS+CR+H 
Sbjct: 493 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 552

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           NV L K A+E LF ++P++   + LL+N+Y+S G+W+ +  +R +     + K P +S
Sbjct: 553 NVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 610



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 152/592 (25%), Positives = 267/592 (45%), Gaps = 119/592 (20%)

Query: 77  FDEMPERNVVSWNNLISALVRNGLEEKALSVYNK-MSNEGFVPTHITLASVFKASTALLD 135
           FD +  R+V +WN +IS   R G   + +  ++  M + G  P + T  SV KA   ++D
Sbjct: 42  FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID 101

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
              G + H L +K G   ++YVA +L+ LY++     +A  +F+EM   +  ++ AM+SG
Sbjct: 102 ---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 158

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
             ++    EAL +   +     ++DSV++ S+L  C   G              F+R V 
Sbjct: 159 YCQSGNAKEALTLSNGL----RAMDSVTVVSLLSACTEAG-------------DFNRGV- 200

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
              +H  +IK G E++L               +   + +F  +  R ++SWN +I  Y  
Sbjct: 201 --TIHSYSIKHGLESEL---------------LRDCQKVFDRMYVRDLISWNSIIKAYEL 243

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK-------------------- 355
             Q  +AI L Q M+    +PD +T I++     + GDI+                    
Sbjct: 244 NEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT 303

Query: 356 ----------------TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                           + R +F+ +P+  V SWN ++S Y+Q+    EAI+++  M+  G
Sbjct: 304 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 363

Query: 400 -VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
            +  ++ T   +L +C+  G L  G ++H   LK   ++D +V + L  +Y KC R E A
Sbjct: 364 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDA 423

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
             +F++IP ++ V WN++IA    +    +A M FK+M    + P   +F T+LS+C+  
Sbjct: 424 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS-- 481

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT----- 573
                    H+ +  +G              +C           F+MM     +T     
Sbjct: 482 ---------HSGLVDEG-------------QWC-----------FEMMQTDYGITPSLKH 508

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  M+  Y + G  + A++  K M    ++PD   + A+L+AC   G VD+G
Sbjct: 509 YGCMVDMYGRAGQLETALKFIKSM---SLQPDASIWGALLSACRVHGNVDLG 557



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 218/478 (45%), Gaps = 77/478 (16%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G  +H   L+ G   D ++   LI LYS+     +A+ LFD+MP +D+ SWNA++S  
Sbjct: 100 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 159

Query: 65  CKSDDLEFAY-------------------------------------------------- 74
           C+S + + A                                                   
Sbjct: 160 CQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELLRDC 219

Query: 75  -KLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
            K+FD M  R+++SWN++I A   N    +A+S++ +M      P  +TL S+    + L
Sbjct: 220 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 279

Query: 134 LDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
            D+   R   G  ++ G   ++I + NA++ +YAK G    A  VF  +   + +++  +
Sbjct: 280 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 339

Query: 193 MSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           +SG A+     EA+EM+ +M  +  ++ +  +  SVL  C++ G   +            
Sbjct: 340 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ------------ 387

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G ++H   +K G   D+ +  SL DMY K G ++ A  +F  +P  + V WN +IA
Sbjct: 388 ----GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 443

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----S 366
            +G      KA+ L + M   G +PD +T + +L AC  SG +  G+  F+ M      +
Sbjct: 444 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT 503

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           PS+  +  M+  Y ++   + A+K  + M    ++PD +    +LS+C   G ++ GK
Sbjct: 504 PSLKHYGCMVDMYGRAGQLETALKFIKSMS---LQPDASIWGALLSACRVHGNVDLGK 558


>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 229/779 (29%), Positives = 364/779 (46%), Gaps = 116/779 (14%)

Query: 6   AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            GK +HA IL+NG F   + ++  +L+  Y+KC                           
Sbjct: 88  TGKQIHARILKNGDFYAKNEYIETKLVIFYAKC--------------------------- 120

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
               D L+ A  LF ++  RNV SW  +I    R GL E AL  + +M      P +  +
Sbjct: 121 ----DALDIAEVLFTKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 176

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +V KA  AL     GR  HG V+K GL+  ++VA++L  +Y KCG    A  VF+E+ E
Sbjct: 177 PNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPE 236

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V + A+M G  +     EA+ +F  M ++ V    V++S+ L   A  G GVE    
Sbjct: 237 RNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMG-GVE---- 291

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q H + I  G E D  L  SLL+ Y K G ++ AE++F  + ++ V
Sbjct: 292 -----------EGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDV 340

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---- 359
           V+WN++I+GY Q+     AI + Q M+    + D VT   ++ A  R+ ++K G+E    
Sbjct: 341 VTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQCY 400

Query: 360 -------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                          +FDS     +  WN +L++Y++S    E 
Sbjct: 401 CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAYAESGLSGEG 460

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           ++LF  MQ  GV P+  T  +I+ S    G ++  K             D ++     GI
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGEVDEAK-------------DMFLQMQSSGI 507

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           +                   +++ W +M+ G+  N    EA +F ++M+++ + P   S 
Sbjct: 508 FP------------------NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAVSI 549

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              LS+CA L+S   GR +H  I ++  + + + + ++L++MY KCGDI  A + F    
Sbjct: 550 TVALSACANLASLHFGRSIHGYIIRNLQHSSSVSIETSLVDMYAKCGDINKAEKVFGSKL 609

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
                 +N MI  YA  G   EA+ LY+ +   G+KPD+IT   +L+AC+H+G  +   E
Sbjct: 610 YSELPLYNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDNNQATE 669

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           I   M   HG+ P L+HY  M+D L  AG   +A  LI+EMP K D  + + L++SC   
Sbjct: 670 IVTEMVSKHGMNPCLEHYGLMVDLLASAGQTDKALRLIEEMPYKPDARMIQSLVASCNKQ 729

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
               L    + +L   +P NS  Y  ++N Y+  G WD++  +RE+M    + K P  S
Sbjct: 730 PKSELVDYLSRQLIESEPDNSGNYVTISNAYAVEGSWDEVVKMREIMKAKGLKKKPGCS 788



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 190/379 (50%), Gaps = 16/379 (4%)

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           D   +PS +S+   +SS  ++   KEA+ L  EM FR ++        IL  C     L 
Sbjct: 28  DQALNPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLC 87

Query: 422 SGKQVHAASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           +GKQ+HA  LK       + Y+ + L+  Y+KC   ++AE +F ++   ++  W ++I  
Sbjct: 88  TGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDALDIAEVLFTKLRVRNVFSWAAIIGV 147

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
                L   A M F +M +NE++P  F    V  +C  L  S  GR VH  + K G  + 
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDC 207

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           +FV S+L +MY KCG +  AR+ FD +  +N V WN ++ GY QNG  +EA+RL+ DM  
Sbjct: 208 VFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRK 267

Query: 600 SGVKPDDITFVAILTACSHSGLVDVG-----VEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
            GV+P  +T    L+A ++ G V+ G     + I N ++LD+ +   L ++ C      +
Sbjct: 268 EGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDNILGTSLLNFYC------K 321

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
            G    AEM+ D M  K D V W +++S       V  A     +L RL+ K       L
Sbjct: 322 VGLIEYAEMVFDRMIDK-DVVTWNLIISGYVQQGLVENAIYMC-QLMRLE-KLKYDCVTL 378

Query: 715 ANIYSSLGRWDDLRAVREL 733
           A + S+  R  +L+  +E+
Sbjct: 379 ATLMSAAARTQNLKLGKEV 397


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 201/666 (30%), Positives = 346/666 (51%), Gaps = 67/666 (10%)

Query: 127 FKASTALLDVE-HGRRCHGL---------VIKIGLDKNIYVANALLSLYAKCGWT--KHA 174
           FK +  L  +E H   CH L         +I  G   + + A+ LL       +    ++
Sbjct: 35  FKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYS 94

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
           + +F+ +   N   +  MM    +++   +AL +++LM++  V  D+ +   V+     +
Sbjct: 95  LQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVV-----Q 149

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
            C V    F            G+++H   +K+GF++D+++ N+L++MYA  G+M  A  +
Sbjct: 150 ACAVRLLEFG-----------GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKL 198

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F   P    VSWN ++AGY +K    +A  +  +M     + + V S +M+V   + G +
Sbjct: 199 FDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMP----QRNIVASNSMIVLLGKMGQV 254

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               ++F+ M    + SW+A++S Y Q+  ++EA+ +F EM   G++ D   +  +LS+C
Sbjct: 255 MEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSAC 314

Query: 415 AAMGILESGKQVHAASLKTASHIDNYV--ASGLIGIYS---------------------- 450
           A + I+++GK +H   ++    I++YV   + LI +YS                      
Sbjct: 315 AHLSIVKTGKMIHGLVIRMG--IESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQIS 372

Query: 451 ---------KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
                    KC   E A  +F  +PE DIV W+++I+G + +    E    F +M+  ++
Sbjct: 373 WNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQI 432

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P +    +V+S+C  L++  QG+ VHA I K+G   ++ +G+ L++MY KCG +  A +
Sbjct: 433 RPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALE 492

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F+ M  K   +WN +I G A NG  + ++ ++ +M  +GV P++ITF+ +L AC H GL
Sbjct: 493 VFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGL 552

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           VD G   F SM   HG+EP + HY CM+D LGRAG  +EAE LI+ MP   D   W  LL
Sbjct: 553 VDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALL 612

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
            +C+ H +  + +R   +L  L P +   + LL+NI++S G W+D+  VR +M +  +VK
Sbjct: 613 GACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVK 672

Query: 742 DPAYSL 747
            P  SL
Sbjct: 673 TPGCSL 678



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/611 (24%), Positives = 270/611 (44%), Gaps = 125/611 (20%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +H H+L+ G   D ++ N LI +Y+ C N   A+                      
Sbjct: 159 GGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDAR---------------------- 196

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                    KLFDE P  + VSWN++++  V+ G  E+A  ++++M              
Sbjct: 197 ---------KLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQ------------ 235

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                                      +NI  +N+++ L  K G    A  +F EM E +
Sbjct: 236 ---------------------------RNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKD 268

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V+++A++SG  +     EAL MF  M    + +D V + SVL  CA             
Sbjct: 269 MVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAH------------ 316

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                S    G+ +H L I++G E+ ++L N+L+ MY+ +G++  A+ +F+       +S
Sbjct: 317 ----LSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQIS 372

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI+G                                   C++ G ++  R +FD MP
Sbjct: 373 WNSMISG-----------------------------------CMKCGSVEKARALFDVMP 397

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
              + SW+A++S Y+Q +   E + LF EMQ   ++PD T L  ++S+C  +  L+ GK 
Sbjct: 398 EKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKW 457

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           VHA   K    ++  + + L+ +Y KC   E A  VF+ + E  +  WN++I GL++N L
Sbjct: 458 VHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGL 517

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR-QVHAQIEKDGYVNDIFVGS 544
              +   F +M+ N + P + +F  VL +C  +    +GR    + IEK G   ++    
Sbjct: 518 VERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYG 577

Query: 545 ALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
            ++++  + G +  A +  + M    +  TW  ++    ++G  +   R+ + +I   ++
Sbjct: 578 CMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIE--LQ 635

Query: 604 PDDITFVAILT 614
           PD   F  +L+
Sbjct: 636 PDHDGFHVLLS 646


>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 798

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 194/622 (31%), Positives = 312/622 (50%), Gaps = 82/622 (13%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           ++N+     ++    K G    AV ++E+    +   FTA +SG  + +    AL +FR 
Sbjct: 179 ERNVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGVFRK 238

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M+   V  + ++   ++  C   G           +   + ++ G  +        FE+ 
Sbjct: 239 MVSCGVRPNGITFVCMIKACVGAG-----------EFGLAMSIVGSAIKSNF----FESS 283

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + + NSL+ +Y + GD  +A  +F  +  + VVSW  ++  Y +                
Sbjct: 284 IEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSE---------------- 327

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                              SGD+   R + D+MP  +  SW  +++ + Q  N  EA+KL
Sbjct: 328 -------------------SGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKL 368

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           + +M   G +P+ +  + +LS+CA +  L  G ++HA SLK  S  + +V+S LI +Y K
Sbjct: 369 YSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCK 428

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM--------------- 496
           C++   A+ +F  +PE +IVCWNS+ +G S N   +EA   FK+M               
Sbjct: 429 CKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGY 488

Query: 497 RQNEMY----------------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
            QN  +                P + +F++VL +CA L S   G+  HA+  K G    I
Sbjct: 489 AQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESI 548

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           F+G+AL +MY K GD+  +++ F  M  +N VTW  MI G A+NG+ +E++ L +DM+A+
Sbjct: 549 FIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLLEDMMAT 608

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G+ P++ TF+A+L ACSH GLV+  +  F  MQ   G+ P   HYTCM+D L RAG   E
Sbjct: 609 GMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQ-AWGISPKEKHYTCMVDVLARAGRLIE 667

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           AE L+ + P K +   W  LLS+C  + N  + +RAA+ L  L   N+A Y LL+N+Y+S
Sbjct: 668 AEALLMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYAS 727

Query: 721 LGRWDDLRAVRELMSENCIVKD 742
            GRW D   +R LM    + KD
Sbjct: 728 CGRWKDAARIRVLMKGTTLKKD 749



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 228/456 (50%), Gaps = 27/456 (5%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N LI LY +  +  +A+ +FD+M  KD+ SW A+L    +S DL+ A ++ D MPERN V
Sbjct: 288 NSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEV 347

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  LI+   + G   +A+ +Y++M  +G  P     +SV  A   L D+  G R H   
Sbjct: 348 SWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARS 407

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K+G   N++V+++L+ +Y KC   + A  +F+ + E N V + ++ SG +   ++VEA+
Sbjct: 408 LKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAM 467

Query: 207 EMFRLM-IRKAVSIDSV---------------SLSSVLGVCAREGCGVESDVFAQSDNKF 250
            +F+ M  R   S +++               S +++L      G    S V     N  
Sbjct: 468 YLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLC 527

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
           S  V G+  H  TIKLG E  + +  +L DMYAK+GD+ S++ +F  +PER+ V+W  MI
Sbjct: 528 SL-VTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMI 586

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP----S 366
            G  +   + ++I LL+ M + G  P+E T + +L AC   G ++     F+ M     S
Sbjct: 587 QGLAENGFAEESILLLEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQAWGIS 646

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           P    +  M+   +++    EA  L  +      K +  + A +LS+C      E G++ 
Sbjct: 647 PKEKHYTCMVDVLARAGRLIEAEALLMKTP---SKSEANSWAALLSACNTYKNEEIGER- 702

Query: 427 HAASLKTASHIDNYVASGLIG-IYSKCQRNELAERV 461
            AA        DN     L+  +Y+ C R + A R+
Sbjct: 703 -AAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARI 737



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/573 (24%), Positives = 247/573 (43%), Gaps = 117/573 (20%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYS----------------------------------K 35
           LHAH +R+G+  DT + + L+  Y+                                  K
Sbjct: 104 LHAHAVRSGVAADTSVASHLLTTYAAFARAAECDRAFGDCVAAGAASPFTYDFMVHEHVK 163

Query: 36  CNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISAL 95
             +  SA+ LFD MP +++ S+  ++ A  K   +  A +L+++ P  +V  +   IS  
Sbjct: 164 AGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGF 223

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKN 154
           VRN L   AL V+ KM + G  P  IT   + KA     +        G  IK    + +
Sbjct: 224 VRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFESS 283

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEE-------------------------------MSE 183
           I V N+L++LY + G    A  VF+E                               M E
Sbjct: 284 IEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPE 343

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            NEV++  +++   +     EA++++  M+      +    SSVL  CA        D+ 
Sbjct: 344 RNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACA-----TLEDLR 398

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G ++H  ++K+G   ++ +S+SL+DMY K      A+ IF  LPE+++
Sbjct: 399 G-----------GARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNI 447

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           V WN + +GY    +  +A+ L ++M                                  
Sbjct: 448 VCWNSLASGYSYNGKMVEAMYLFKKM---------------------------------- 473

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            P+ +++SWN ++S Y+Q+    +A++ F  M   G  P   T + +L +CA +  L +G
Sbjct: 474 -PARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTG 532

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           K  HA ++K       ++ + L  +Y+K    + ++R+F+++PE + V W +MI GL+ N
Sbjct: 533 KMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAEN 592

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
               E+ +  + M    M P + +F  +L +C+
Sbjct: 593 GFAEESILLLEDMMATGMTPNEHTFLALLFACS 625



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 152/308 (49%), Gaps = 17/308 (5%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G  +HA  L+ G   + F+ + LI++Y KC     AQ +FD +P K+I  WN++ S   
Sbjct: 399 GGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYS 458

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +  +  A  LF +MP RN+ SWN +IS   +N     AL  +N M   G VP  IT +S
Sbjct: 459 YNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSS 518

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   L  +  G+  H   IK+G++++I++  AL  +YAK G  + +  +F +M E N
Sbjct: 519 VLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERN 578

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +VT+TAM+ GLA+     E++ +   M+   ++ +  +  ++L  C+  G   ++  + +
Sbjct: 579 DVTWTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFE 638

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV- 304
               +  +   +   C                ++D+ A+ G +  AE +    P +S   
Sbjct: 639 KMQAWGISPKEKHYTC----------------MVDVLARAGRLIEAEALLMKTPSKSEAN 682

Query: 305 SWNVMIAG 312
           SW  +++ 
Sbjct: 683 SWAALLSA 690



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 68/167 (40%), Gaps = 32/167 (19%)

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY----------- 594
           ++  + K GDI  AR  FD M  +N V++  M+    + G   EAV LY           
Sbjct: 157 MVHEHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 216

Query: 595 --------------------KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
                               + M++ GV+P+ ITFV ++ AC  +G   + + I  S   
Sbjct: 217 TATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIK 276

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            +  E  ++    +I    R G    A  + DEM  K D V W  LL
Sbjct: 277 SNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVK-DVVSWTALL 322



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 75/232 (32%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK+ HA  ++ G+ +  F+   L ++Y+K  +  S++ +F +MP +            
Sbjct: 530 VTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPER------------ 577

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT-HITL 123
                              N V+W  +I  L  NG  E+++ +   M   G  P  H  L
Sbjct: 578 -------------------NDVTWTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFL 618

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS- 182
           A +F  S       HG                             G  + A+  FE+M  
Sbjct: 619 ALLFACS-------HG-----------------------------GLVEQAIHYFEKMQA 642

Query: 183 ---EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
               P E  +T M+  LA+  R++EA     L+++     ++ S +++L  C
Sbjct: 643 WGISPKEKHYTCMVDVLARAGRLIEAEA---LLMKTPSKSEANSWAALLSAC 691


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 201/652 (30%), Positives = 343/652 (52%), Gaps = 58/652 (8%)

Query: 136 VEHGRRCHGLVIKIGLDK--NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           ++  +  HG ++K       ++ + N +   Y+KC     A  +F++MS+ N  ++T ++
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           +GLA+    ++  E F  M  + +  D  + S +L +C     G++S             
Sbjct: 144 AGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICI----GLDSIEL---------- 189

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G  VH   +  GF +   +S +LL+MYAK  +++ +  +F+ + E +VVSWN MI G+
Sbjct: 190 --GNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGF 247

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSI-----------------------------NM 344
                   A +L  RM   G  PD  T I                             N 
Sbjct: 248 TSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNT 307

Query: 345 LVACV------RSGDIKTGREMFDS--MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           LV         + G ++  R +F+S  +     + WNAM+S Y +S  +++A++LF +M 
Sbjct: 308 LVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMC 367

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQR 454
              +  D  T   + ++ AA+  L  GK+VHA ++K+   + NYV+  + +   Y+KC  
Sbjct: 368 QNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEV-NYVSISNAVANAYAKCGS 426

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E   +VF+R+ + D++ W S++   S  S   +A   F  MR   + P QF+F++VL S
Sbjct: 427 LEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVS 486

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           CA L     G+QVH  I K G   D  + SAL++MY KCG +  A++ F+ +   +TV+W
Sbjct: 487 CANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSW 546

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
             +I G+AQ+G  D+A++L++ M+  GV+P+ +TF+ +L ACSH GLV+ G++ F  M+ 
Sbjct: 547 TAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKK 606

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
            +G+ P ++HY C++D L R GH ++A   I  MP + + ++W+ LL +CR+H NV L +
Sbjct: 607 TYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGE 666

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA+++     +NSA Y LL+N Y   G + D  ++R +M E  + K+P  S
Sbjct: 667 LAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCS 718



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/627 (24%), Positives = 289/627 (46%), Gaps = 96/627 (15%)

Query: 7   GKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
            K +H  +L++   +     L N +   YSKC++  +A  LFD+M  ++ +SW       
Sbjct: 87  AKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTV----- 141

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     LI+ L  NGL       + +M ++G  P     +
Sbjct: 142 --------------------------LIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYS 175

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            + +    L  +E G   H  ++  G   + +V+ ALL++YAK    + +  VF  M+E 
Sbjct: 176 GILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEV 235

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++ AM++G    D  ++A ++F  M+ + V+ D+    + +GV   +  G+  DV  
Sbjct: 236 NVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDA---QTFIGVA--KAIGMLRDV-- 288

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN--LPERS 302
              NK       ++V    ++LG +++  +  +L+DM +K G +  A  IF++  +  R 
Sbjct: 289 ---NK------AKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRF 339

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRM--------------------------------- 329
              WN MI+GY +   + KA+EL  +M                                 
Sbjct: 340 NAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHA 399

Query: 330 ---KSCGFEPDEVTSINMLV-ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
              KS G E + V+  N +  A  + G ++  R++F+ M    + SW +++++YSQ    
Sbjct: 400 RAIKS-GLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEW 458

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            +AI++F  M+  G+ P++ T + +L SCA + +LE G+QVH    K    +D  + S L
Sbjct: 459 DKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESAL 518

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC     A++VF+RI   D V W ++IAG + + +  +A   F++M Q  + P  
Sbjct: 519 VDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNA 578

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            +F  VL +C+      +G Q    ++K  G V ++   + ++++  + G +  A +F  
Sbjct: 579 VTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFIS 638

Query: 565 MMHGK-NTVTWNEM-----IHGYAQNG 585
            M  + N + W  +     +HG  + G
Sbjct: 639 RMPVEPNEMVWQTLLGACRVHGNVELG 665



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 144/294 (48%), Gaps = 13/294 (4%)

Query: 400 VKPDRT-------TLAIILSSCAAMGILESGKQVHAASLKT--ASHIDNYVASGLIGIYS 450
           VK D+T        L  +L  C     L+  K VH   LK+  ++H    + + +   YS
Sbjct: 57  VKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYS 116

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   + A R+F ++ + +   W  +IAGL+ N L ++ F FF +M+   ++P QF+++ 
Sbjct: 117 KCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSG 176

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +L  C  L S   G  VHAQI   G+ +  FV +AL+ MY K  +I  + + F+ M   N
Sbjct: 177 ILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVN 236

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+WN MI G+  N    +A  L+  M+  GV PD  TF+ +  A      V+   E+ +
Sbjct: 237 VVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV-S 295

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE--MPCKDDPVIWEVLLS 682
              L+ GV+      T +ID   + G   EA  + +   + C+ +   W  ++S
Sbjct: 296 GYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAP-WNAMIS 348



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 169/349 (48%), Gaps = 52/349 (14%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA+ +A  K   LE   K+F+ M +R+++SW +L++A  +    +KA+ +++ M  EG  
Sbjct: 415 NAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIA 474

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T +SV  +   L  +E+G++ HG++ K+GLD +  + +AL+ +YAKCG    A  V
Sbjct: 475 PNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKV 534

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  +S  + V++TA+++G A+   V +AL++FR M++  V  ++V+   VL  C+  G  
Sbjct: 535 FNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGL- 593

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           VE  +              Q    +    G   ++     ++D+ ++ G ++ A    S 
Sbjct: 594 VEEGL--------------QYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISR 639

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +P                                   EP+E+    +L AC   G+++ G
Sbjct: 640 MP----------------------------------VEPNEMVWQTLLGACRVHGNVELG 665

Query: 358 R---EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
               +   S  + + +++  + ++Y +S ++K+ + L   M+ +GVK +
Sbjct: 666 ELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKE 714


>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
          Length = 696

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 206/630 (32%), Positives = 324/630 (51%), Gaps = 58/630 (9%)

Query: 159 NALLSLYAKCGWTKHAVP--VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
           N LL+ Y++      A    VF+E+   +EV++ A+++  A +    EA  + R M  + 
Sbjct: 29  NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           ++ ++ +L S L                +S     R   G Q+  L +K G   ++  ++
Sbjct: 89  LASNTFALGSAL----------------RSAAVARRPAIGAQLQSLALKSGLANNVFAAS 132

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +LLD+YAK G +  A  +F  +PER+ VSWN +IAGY +      A+EL   M+  G  P
Sbjct: 133 ALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAP 192

Query: 337 DEVTSINMLVAC----------------------------------VRSGDIKTGREMFD 362
           DE T  ++L A                                    + G +K  R +FD
Sbjct: 193 DEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFD 252

Query: 363 SMPS-PSVSSWNAMLSSYSQSENHKEAIKLF-REMQFRGVKPDRTTLAIILSSCAAMGIL 420
            +     + SWNAML +Y+ +    EA+K F R MQ  GV PD  +   I+SSC+  G  
Sbjct: 253 GIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHD 312

Query: 421 E-SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN---ELAERVFHRIPELDIVCWNSM 476
           +  G+ +H   +K+A      V + LI +Y++   N   E A + F+ +   D V WNSM
Sbjct: 313 DHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSM 372

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
           + G S + L  +A  FF+ M    +   +++F+  L S ++L+    G+Q+H  +   G+
Sbjct: 373 LTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGF 432

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
            ++ FV S+LI MY K G I  AR+ F+     ++V WN MI GYAQ+G  +    L+ +
Sbjct: 433 ASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNE 492

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M+      D ITFV ++T+CSH+GLVD G EI N+M+  +GV   ++HY C +D  GRAG
Sbjct: 493 MLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAG 552

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              +A+ LID MP + D ++W  LL +CR+H NV LA   A  LF  +P+  + Y LL++
Sbjct: 553 QLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSS 612

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +YS LG W D   V+ +M +  + K P +S
Sbjct: 613 MYSGLGMWSDRATVQRVMKKRGLSKVPGWS 642



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 152/616 (24%), Positives = 268/616 (43%), Gaps = 95/616 (15%)

Query: 57  WNAILSAQCKS--DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
           WN +L+A  +S  D L  A ++FDE+P R+ VSWN L++A   +G   +A  +   M  +
Sbjct: 28  WNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQ 87

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G       L S  +++        G +   L +K GL  N++ A+ALL +YAKCG  + A
Sbjct: 88  GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             VF+ M E N V++ A+++G  ++  +  ALE+F  M R+ ++ D  + +S+L      
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGP 207

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
            C +                   Q+H   +K G    L + N+ +  Y++ G +  +  I
Sbjct: 208 SCFLM-----------------HQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRI 250

Query: 295 FSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQR-MKSCGFEPDEVTSINMLVACVRSG 352
           F  + + R ++SWN M+  Y       +A++   R M+  G  PD  +  +++ +C   G
Sbjct: 251 FDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHG 310

Query: 353 -DIKTGR--------------------------------------EMFDSMPSPSVSSWN 373
            D   GR                                      + F+S+      SWN
Sbjct: 311 HDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWN 370

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           +ML+ YSQ     +A+K FR M    V+ D    +  L S + + +L+ GKQ+H   + +
Sbjct: 371 SMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHS 430

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               +++V+S LI +YSK    + A + F    +   V WN+MI G + +       + F
Sbjct: 431 GFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILF 490

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
            +M Q +      +F  +++SC+      +G ++   +E          G  L   +  C
Sbjct: 491 NEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETK-------YGVPLRMEHYAC 543

Query: 554 G-DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           G D+YG                        + G  D+A +L   M     +PD + ++ +
Sbjct: 544 GVDLYG------------------------RAGQLDKAKKLIDSM---PFEPDAMVWMTL 576

Query: 613 LTACSHSGLVDVGVEI 628
           L AC   G V++  ++
Sbjct: 577 LGACRIHGNVELASDV 592



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 132/551 (23%), Positives = 236/551 (42%), Gaps = 110/551 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  L +  L++GL ++ F  + L+++Y+KC     A+ +FD MP ++  SWNA+++   +
Sbjct: 112 GAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTE 171

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S D+  A +LF EM ER                              EG  P   T AS 
Sbjct: 172 SGDMASALELFLEM-ER------------------------------EGLAPDEATFAS- 199

Query: 127 FKASTALLDVEHGRRC------HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
                 LL    G  C      HG ++K G    + V NA ++ Y++CG  K +  +F+ 
Sbjct: 200 ------LLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDG 253

Query: 181 MSEPNE-VTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           + +  + +++ AM+          EA++ F R+M    V  D  S +S++  C+  G   
Sbjct: 254 IGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHG--- 310

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIF 295
                   D+   R +HG     L IK   E    + N+L+ MY +   N  M+ A   F
Sbjct: 311 -------HDDHQGRVIHG-----LVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCF 358

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS------------------------ 331
           ++L  +  VSWN M+ GY Q   S  A++  + M S                        
Sbjct: 359 NSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQ 418

Query: 332 -----------CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                       GF  ++  S +++    +SG I   R+ F+     S   WNAM+  Y+
Sbjct: 419 LGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYA 478

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID-- 438
           Q    +    LF EM  R    D  T   +++SC+  G+++ G ++   +++T   +   
Sbjct: 479 QHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI-LNTMETKYGVPLR 537

Query: 439 -NYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-----SLDIEAFM 491
             + A G + +Y +  + + A+++   +P E D + W +++    ++     + D+ + +
Sbjct: 538 MEHYACG-VDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHL 596

Query: 492 FFKQMRQNEMY 502
           F  + RQ+  Y
Sbjct: 597 FVAEPRQHSTY 607


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 219/718 (30%), Positives = 347/718 (48%), Gaps = 94/718 (13%)

Query: 32  LYSKCNNTHSAQ--HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWN 89
           L  +CNN H A   H   +     I         +C   D++                WN
Sbjct: 24  LKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIK---------------EWN 68

Query: 90  NLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI 149
             IS+ +R G   +AL V+ +M     V                                
Sbjct: 69  VAISSYMRTGRCNEALRVFKRMPRWSSVSY------------------------------ 98

Query: 150 GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
                    N ++S Y + G  + A  +F+EM E + V++  M+ G  +   + +A E+F
Sbjct: 99  ---------NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 149

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
            +M  +    D  S +++L   A+ GC         + + F R      V          
Sbjct: 150 EIMPER----DVCSWNTMLSGYAQNGC------VDDARSVFDRMPEKNDVSW-------- 191

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
                 N+LL  Y +N  M+ A ++F +    ++VSWN ++ G+ +K +  +A +    M
Sbjct: 192 ------NALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                  D V+   ++    +SG I   R++FD  P   V +W AM+S Y Q+   +EA 
Sbjct: 246 NV----RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAR 301

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGI 448
           +LF +M      P+R  ++    +    G ++  +   A  L       N    + +I  
Sbjct: 302 ELFDKM------PERNEVSW---NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITG 352

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y++C +   A+ +F ++P+ D V W +MIAG S +    EA   F QM +      + SF
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           ++ LS+CA + +   G+Q+H ++ K GY    FVG+AL+ MYCKCG I  A   F  M G
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG 472

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           K+ V+WN MI GY+++G+G+ A+R ++ M   G+KPDD T VA+L+ACSH+GLVD G + 
Sbjct: 473 KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY 532

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F +M  D+GV P   HY CM+D LGRAG   +A  L+  MP + D  IW  LL + R+H 
Sbjct: 533 FYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           N  LA+ AA+++F ++P+NS  Y LL+N+Y+S GRW D+  +R  M +  + K P YS
Sbjct: 593 NTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYS 650



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 155/526 (29%), Positives = 247/526 (46%), Gaps = 72/526 (13%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N  I  Y +    + A  +F +MP     S+N ++S   ++ + E A KLFDEMPER++V
Sbjct: 68  NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SWN +I   VRN    KA  ++  M                                   
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIMP---------------------------------- 153

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
                ++++   N +LS YA+ G    A  VF+ M E N+V++ A++S   +  ++ EA 
Sbjct: 154 -----ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEAC 208

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            +F+     A+    VS + +LG   ++   VE+  F  S N   R+V    V   TI  
Sbjct: 209 MLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMN--VRDV----VSWNTIIT 258

Query: 267 GF-------EA----------DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
           G+       EA          D+    +++  Y +N  ++ A  +F  +PER+ VSWN M
Sbjct: 259 GYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAM 318

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPS 368
           +AGY Q  +   A EL   M         V++ N M+    + G I   + +FD MP   
Sbjct: 319 LAGYVQGERMEMAKELFDVMPC-----RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
             SW AM++ YSQS +  EA++LF +M+  G + +R++ +  LS+CA +  LE GKQ+H 
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
             +K       +V + L+ +Y KC   E A  +F  +   DIV WN+MIAG S +     
Sbjct: 434 RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           A  FF+ M++  + P   +   VLS+C+      +GRQ    + +D
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQD 539



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 193/400 (48%), Gaps = 32/400 (8%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N L+  + K      A+  FD M  +D+ SWN I++   +S  ++ A +LFDE P ++V 
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           +W  ++S  ++N + E+A  +++KM     V  +  LA   +     +  E        +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKE--------L 334

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
             +   +N+   N +++ YA+CG    A  +F++M + + V++ AM++G +++    EAL
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 394

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            +F  M R+   ++  S SS L  CA        DV A           G+Q+H   +K 
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCA--------DVVALE--------LGKQLHGRLVKG 438

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           G+E    + N+LL MY K G ++ A  +F  +  + +VSWN MIAGY +      A+   
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQ 381
           + MK  G +PD+ T + +L AC  +G +  GR+ F +M       P+   +  M+    +
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           +   ++A  L + M F   +PD      +L +    G  E
Sbjct: 559 AGLLEDAHNLMKNMPF---EPDAAIWGTLLGASRVHGNTE 595



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 143/297 (48%), Gaps = 21/297 (7%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N ++  Y +      A+ LFD MP +++ +WN +++   +   +  A  LFD+MP+R+ V
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  +I+   ++G   +AL ++ +M  EG      + +S       ++ +E G++ HG +
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K G +   +V NALL +Y KCG  + A  +F+EM+  + V++  M++G ++      AL
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGC---------------GV--ESDVFAQSDNK 249
             F  M R+ +  D  ++ +VL  C+  G                GV   S  +A   + 
Sbjct: 496 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 555

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV----IFSNLPERS 302
             R    +  H L   + FE D  +  +LL     +G+ + AE     IF+  PE S
Sbjct: 556 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENS 612



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 33/189 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH  +++ G     F+ N L+ +Y KC +   A  LF +M  KDI SWN        
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT------- 480

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I+   R+G  E AL  +  M  EG  P   T+ +V
Sbjct: 481 ------------------------MIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516

Query: 127 FKASTALLDVEHGRR-CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EP 184
             A +    V+ GR+  + +    G+  N      ++ L  + G  + A  + + M  EP
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576

Query: 185 NEVTFTAMM 193
           +   +  ++
Sbjct: 577 DAAIWGTLL 585


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 178/528 (33%), Positives = 287/528 (54%), Gaps = 36/528 (6%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ VH      G +++   + +L +MYAK      A  +F  +P R  V+WN ++AGY +
Sbjct: 78  GRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYAR 137

Query: 316 KYQSTKAIELLQRMKSC-GFEPDEVTSINMLV---------------------------- 346
              +  A+E++ RM+   G  PD +T +++L                             
Sbjct: 138 NGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVN 197

Query: 347 -------ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                  A  + GDI+  R +FD MP+ +  SWNAM+  Y+Q+ + +EA+ LF  M   G
Sbjct: 198 VATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEG 257

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V     ++   L +C  +G L+ G +VH   ++     +  V + LI +YSKC+R +LA 
Sbjct: 258 VDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLAS 317

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            VF  +     V WN+MI G + N    +A   F +M+   + P  F+  +V+ + A +S
Sbjct: 318 HVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADIS 377

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
              Q R +H    +     D++V +ALI+MY KCG +  AR  F+    ++ +TWN MIH
Sbjct: 378 DPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIH 437

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GY  +G+G  AV L+++M + G+ P++ TF+++L+ACSH+GLVD G E F SM+ D+G+E
Sbjct: 438 GYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLE 497

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P ++HY  M+D LGRAG   EA   I +MP      ++  +L +C+LH NV LA+ +A++
Sbjct: 498 PGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQK 557

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           +F L P+    + LLANIY++   W D+  VR  M +N + K P +S+
Sbjct: 558 IFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSI 605



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 196/362 (54%), Gaps = 24/362 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            AIL A CK  D+  A  +FD MP +N VSWN +I    +NG   +AL+++N+M  EG  
Sbjct: 200 TAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVD 259

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
            T +++ +  +A   L  ++ G R H L+++IGLD N+ V NAL+++Y+KC     A  V
Sbjct: 260 VTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHV 319

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+E+    +V++ AM+ G A+     +A+ +F  M  + V  DS +L SV+   A     
Sbjct: 320 FDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALA----- 374

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
              D+   SD   +R +HG      +I+L  + D+++  +L+DMYAK G ++ A ++F++
Sbjct: 375 ---DI---SDPLQARWIHG-----YSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS 423

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
             ER V++WN MI GYG       A+EL + MKS G  P+E T +++L AC  +G +  G
Sbjct: 424 ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEG 483

Query: 358 REMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           RE F SM       P +  +  M+    ++    EA    ++M    + P  +    +L 
Sbjct: 484 REYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP---MDPGLSVYGAMLG 540

Query: 413 SC 414
           +C
Sbjct: 541 AC 542



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 202/455 (44%), Gaps = 83/455 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA +   G+  +      L  +Y+KC     A+                       
Sbjct: 78  GRAVHAQLAARGIDSEALAATALANMYAKCRRPADAR----------------------- 114

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLAS 125
                   ++FD MP R+ V+WN L++   RNGL   A+ +  +M  E G  P  ITL S
Sbjct: 115 --------RVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A      +   R  H   I+ GL++ + VA A+L  Y KCG  + A  VF+ M   N
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM+ G A+     EAL +F  M+ + V +  VS+ + L  C   GC  E      
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE------ 280

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G +VH L +++G ++++ + N+L+ MY+K   +D A  +F  L  R+ VS
Sbjct: 281 ----------GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS 330

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN MI G  Q   S  A+ L  RM+    +PD  T ++++ A                  
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSI 390

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G +   R +F+S     V +WNAM+  Y      K A++
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           LF EM+  G+ P+ TT   +LS+C+  G+++ G++
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE 485



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 213/467 (45%), Gaps = 52/467 (11%)

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           AL+ +  MS+ G  P   T  S+ K   A  D+  GR  H  +   G+D     A AL +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSV 222
           +YAKC     A  VF+ M   + V + A+++G A+      A+EM  R+   +    DS+
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
           +L SVL                 +          ++ H   I+ G E  ++++ ++LD Y
Sbjct: 163 TLVSVL----------------PACANARALAACREAHAFAIRSGLEELVNVATAILDAY 206

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
            K GD+ +A V+F  +P ++ VSWN MI GY Q   S +A+ L  RM   G +  +V+ +
Sbjct: 207 CKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVL 266

Query: 343 NMLVACVRSGDIKTG-----------------------------------REMFDSMPSP 367
             L AC   G +  G                                     +FD +   
Sbjct: 267 AALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRR 326

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +  SWNAM+   +Q+   ++A++LF  MQ   VKPD  TL  ++ + A +      + +H
Sbjct: 327 TQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIH 386

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
             S++     D YV + LI +Y+KC R  +A  +F+   E  ++ WN+MI G   +    
Sbjct: 387 GYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGK 446

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
            A   F++M+   + P + +F +VLS+C+      +GR+    +++D
Sbjct: 447 AAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKED 493



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 172/362 (47%), Gaps = 15/362 (4%)

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           +A L + +   +   A+  F  M   G  P   T   +L  CAA G L +G+ VHA    
Sbjct: 28  HARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAA 87

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                +   A+ L  +Y+KC+R   A RVF R+P  D V WN+++AG + N L   A   
Sbjct: 88  RGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEM 147

Query: 493 FKQMRQNE-MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
             +M++ E   P   +  +VL +CA   +    R+ HA   + G    + V +A+++ YC
Sbjct: 148 VVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYC 207

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCGDI  AR  FD M  KN+V+WN MI GYAQNG   EA+ L+  M+  GV   D++ +A
Sbjct: 208 KCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLA 267

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
            L AC   G +D G+ + + + +  G++  +     +I    +      A  + DE+  +
Sbjct: 268 ALQACGELGCLDEGMRV-HELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELD-R 325

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL--------LANIYSSL-G 722
              V W  ++  C   A    ++ A     R+  +N  P S         LA+I   L  
Sbjct: 326 RTQVSWNAMILGC---AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQA 382

Query: 723 RW 724
           RW
Sbjct: 383 RW 384



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 163/420 (38%), Gaps = 68/420 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  ++R GL  +  + N LI +YSKC     A H+                     
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHV--------------------- 319

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                     FDE+  R  VSWN +I    +NG  E A+ ++ +M  E   P   TL SV
Sbjct: 320 ----------FDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSV 369

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   + D    R  HG  I++ LD+++YV  AL+ +YAKCG    A  +F    E + 
Sbjct: 370 IPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHV 429

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T+ AM+ G         A+E+F  M    +  +  +  SVL  C+  G   E   +  S
Sbjct: 430 ITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTS 489

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                          +    G E  +    +++D+  + G +D A      +P    +S 
Sbjct: 490 ---------------MKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSV 534

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFE--PDE----VTSINMLVACVRSGDIKTGREM 360
              + G  + +   K +EL +      FE  P E    V   N+        D+   R  
Sbjct: 535 YGAMLGACKLH---KNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTA 591

Query: 361 FDSMPSPSVSSW------NAMLSSYSQSENHKEA-------IKLFREMQFRGVKPDRTTL 407
            +         W      N + + YS S NH++A        KL  E++  G  PD  ++
Sbjct: 592 MEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI 651


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 178/528 (33%), Positives = 287/528 (54%), Gaps = 36/528 (6%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ VH      G +++   + +L +MYAK      A  +F  +P R  V+WN ++AGY +
Sbjct: 78  GRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYAR 137

Query: 316 KYQSTKAIELLQRMKSC-GFEPDEVTSINMLV---------------------------- 346
              +  A+E++ RM+   G  PD +T +++L                             
Sbjct: 138 NGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVN 197

Query: 347 -------ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                  A  + GDI+  R +FD MP+ +  SWNAM+  Y+Q+ + +EA+ LF  M   G
Sbjct: 198 VATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEG 257

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V     ++   L +C  +G L+ G +VH   ++     +  V + LI +YSKC+R +LA 
Sbjct: 258 VDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLAS 317

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            VF  +     V WN+MI G + N    +A   F +M+   + P  F+  +V+ + A +S
Sbjct: 318 HVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADIS 377

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
              Q R +H    +     D++V +ALI+MY KCG +  AR  F+    ++ +TWN MIH
Sbjct: 378 DPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIH 437

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GY  +G+G  AV L+++M + G+ P++ TF+++L+ACSH+GLVD G E F SM+ D+G+E
Sbjct: 438 GYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLE 497

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P ++HY  M+D LGRAG   EA   I +MP      ++  +L +C+LH NV LA+ +A++
Sbjct: 498 PGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQK 557

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           +F L P+    + LLANIY++   W D+  VR  M +N + K P +S+
Sbjct: 558 IFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSI 605



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 196/362 (54%), Gaps = 24/362 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            AIL A CK  D+  A  +FD MP +N VSWN +I    +NG   +AL+++N+M  EG  
Sbjct: 200 TAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVD 259

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
            T +++ +  +A   L  ++ G R H L+++IGLD N+ V NAL+++Y+KC     A  V
Sbjct: 260 VTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHV 319

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+E+    +V++ AM+ G A+     +A+ +F  M  + V  DS +L SV+   A     
Sbjct: 320 FDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALA----- 374

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
              D+   SD   +R +HG      +I+L  + D+++  +L+DMYAK G ++ A ++F++
Sbjct: 375 ---DI---SDPLQARWIHG-----YSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS 423

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
             ER V++WN MI GYG       A+EL + MKS G  P+E T +++L AC  +G +  G
Sbjct: 424 ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEG 483

Query: 358 REMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           RE F SM       P +  +  M+    ++    EA    ++M    + P  +    +L 
Sbjct: 484 REYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP---MDPGLSVYGAMLG 540

Query: 413 SC 414
           +C
Sbjct: 541 AC 542



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 202/455 (44%), Gaps = 83/455 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA +   G+  +      L  +Y+KC     A+                       
Sbjct: 78  GRAVHAQLAARGIDSEALAATALANMYAKCRRPADAR----------------------- 114

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLAS 125
                   ++FD MP R+ V+WN L++   RNGL   A+ +  +M  E G  P  ITL S
Sbjct: 115 --------RVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A      +   R  H   I+ GL++ + VA A+L  Y KCG  + A  VF+ M   N
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM+ G A+     EAL +F  M+ + V +  VS+ + L  C   GC  E      
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE------ 280

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G +VH L +++G ++++ + N+L+ MY+K   +D A  +F  L  R+ VS
Sbjct: 281 ----------GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS 330

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN MI G  Q   S  A+ L  RM+    +PD  T ++++ A                  
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSI 390

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G +   R +F+S     V +WNAM+  Y      K A++
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           LF EM+  G+ P+ TT   +LS+C+  G+++ G++
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE 485



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 213/467 (45%), Gaps = 52/467 (11%)

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           AL+ +  MS+ G  P   T  S+ K   A  D+  GR  H  +   G+D     A AL +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSV 222
           +YAKC     A  VF+ M   + V + A+++G A+      A+EM  R+   +    DS+
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
           +L SVL                 +          ++ H   I+ G E  ++++ ++LD Y
Sbjct: 163 TLVSVL----------------PACANARALAACREAHAFAIRSGLEELVNVATAILDAY 206

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
            K GD+ +A V+F  +P ++ VSWN MI GY Q   S +A+ L  RM   G +  +V+ +
Sbjct: 207 CKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVL 266

Query: 343 NMLVACVRSGDIKTG-----------------------------------REMFDSMPSP 367
             L AC   G +  G                                     +FD +   
Sbjct: 267 AALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRR 326

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +  SWNAM+   +Q+   ++A++LF  MQ   VKPD  TL  ++ + A +      + +H
Sbjct: 327 TQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIH 386

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
             S++     D YV + LI +Y+KC R  +A  +F+   E  ++ WN+MI G   +    
Sbjct: 387 GYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGK 446

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
            A   F++M+   + P + +F +VLS+C+      +GR+    +++D
Sbjct: 447 AAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKED 493



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 166/347 (47%), Gaps = 15/347 (4%)

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+  F  M   G  P   T   +L  CAA G L +G+ VHA         +   A+ L  
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQF 506
           +Y+KC+R   A RVF R+P  D V WN+++AG + N L   A     +M++ E   P   
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +  +VL +CA   +    R+ HA   + G    + V +A+++ YCKCGDI  AR  FD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             KN+V+WN MI GYAQNG   EA+ L+  M+  GV   D++ +A L AC   G +D G+
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
            + + + +  G++  +     +I    +      A  + DE+  +   V W  ++  C  
Sbjct: 283 RV-HELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELD-RRTQVSWNAMILGC-- 338

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSL--------LANIYSSL-GRW 724
            A    ++ A     R+  +N  P S         LA+I   L  RW
Sbjct: 339 -AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARW 384



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 163/420 (38%), Gaps = 68/420 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  ++R GL  +  + N LI +YSKC     A H+                     
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHV--------------------- 319

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                     FDE+  R  VSWN +I    +NG  E A+ ++ +M  E   P   TL SV
Sbjct: 320 ----------FDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSV 369

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   + D    R  HG  I++ LD+++YV  AL+ +YAKCG    A  +F    E + 
Sbjct: 370 IPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHV 429

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T+ AM+ G         A+E+F  M    +  +  +  SVL  C+  G   E   +  S
Sbjct: 430 ITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTS 489

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                          +    G E  +    +++D+  + G +D A      +P    +S 
Sbjct: 490 ---------------MKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSV 534

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFE--PDE----VTSINMLVACVRSGDIKTGREM 360
              + G  + +   K +EL +      FE  P E    V   N+        D+   R  
Sbjct: 535 YGAMLGACKLH---KNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTA 591

Query: 361 FDSMPSPSVSSW------NAMLSSYSQSENHKEA-------IKLFREMQFRGVKPDRTTL 407
            +         W      N + + YS S NH++A        KL  E++  G  PD  ++
Sbjct: 592 MEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI 651


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 226/722 (31%), Positives = 369/722 (51%), Gaps = 62/722 (8%)

Query: 65  CKSDDLEFAYKLFDEMPERNV-VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
           C  D     Y L DE+P R+  V  N ++    R G+  + L  ++     G +    TL
Sbjct: 44  CLRDPPGARYPL-DEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATL 102

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + V KA  ++ D   G + H L +K G D+  +    +L+ +Y KCG     + VFE M 
Sbjct: 103 SCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMP 162

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           + N VT+T++++G A      E + +F  M  + +  +  + +SVL   A +G     D+
Sbjct: 163 KKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQG---ALDL 219

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        GQ+VH  ++K G  + + + NSL++MYAK G ++ A+ +F+ +  R 
Sbjct: 220 -------------GQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRD 266

Query: 303 VVSWNVMIAGY--------------------GQKYQST-----------KAIELLQRMKS 331
           +VSWN ++AG                     G+  QST           K + L +++ S
Sbjct: 267 MVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHS 326

Query: 332 C----GFEPDEVTSINMLVACVRSGDIKTGREMFD-SMPSPSVSSWNAMLSSYSQSENHK 386
           C    GF         +  A  + G++     +F  +  S +V SW A++S   Q+ +  
Sbjct: 327 CVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIP 386

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
            A+ LF  M+   V P+  T + +L   A++ IL    Q+HA  +KT       V + L+
Sbjct: 387 LAVVLFSRMREDRVMPNEFTYSAMLK--ASLSILP--PQIHAQVIKTNYQHIPSVGTALL 442

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQ 505
             YSK    E A  +F  I + D+V W++M++     + D E A   F +M    + P +
Sbjct: 443 ASYSKFGSTEDALSIFKMIEQKDVVAWSAMLS-CHAQAGDCEGATYLFNKMAIQGIKPNE 501

Query: 506 FSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           F+ ++V+ +CA  S+   QGRQ HA   K  Y + I V SAL+ MY + G+I  A+  F+
Sbjct: 502 FTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFE 561

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
               ++ V+WN MI GYAQ+GY  +A+  ++ M ASG++ D +TF+A++  C+H+GLV  
Sbjct: 562 RQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVE 621

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G + F+SM  DH + P ++HY CM+D   RAG   E   LI +MP     ++W  LL +C
Sbjct: 622 GQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGAC 681

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           R+H NV L K +A++L  L+P +S+ Y LL+NIY++ G+W +   VR+LM    + K+  
Sbjct: 682 RVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAG 741

Query: 745 YS 746
            S
Sbjct: 742 CS 743



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 109/456 (23%), Positives = 192/456 (42%), Gaps = 88/456 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA  ++ G     F+CN L+ +Y+KC     A         K +++W         
Sbjct: 220 GQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDA---------KSVFNW--------- 261

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        M  R++VSWN L++ L  N  E +AL ++++        T  T A+V
Sbjct: 262 -------------METRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATV 308

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EPN 185
            K    L  +   R+ H  V+K G      V  AL   Y+KCG    A+ +F   +   N
Sbjct: 309 IKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRN 368

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++TA++SG  +   +  A+ +F  M    V  +  + S++L                 
Sbjct: 369 VVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML----------------- 411

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
              K S ++   Q+H   IK  ++    +  +LL  Y+K G  + A  IF  + ++ VV+
Sbjct: 412 ---KASLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVA 468

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------- 349
           W+ M++ + Q      A  L  +M   G +P+E T  +++ AC                 
Sbjct: 469 WSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAIS 528

Query: 350 --------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               R G+I + + +F+      + SWN+M+S Y+Q     +AI
Sbjct: 529 IKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAI 588

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           + FR+M+  G++ D  T   ++  C   G++  G+Q
Sbjct: 589 ETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQ 624



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 129/291 (44%), Gaps = 47/291 (16%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA +++        +   L+  YSK  +T  A  +F  +  KD+ +W+A+LS   ++ D
Sbjct: 422 IHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGD 481

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
            E A  LF                               NKM+ +G  P   T++SV  A
Sbjct: 482 CEGATYLF-------------------------------NKMAIQGIKPNEFTISSVIDA 510

Query: 130 -STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
            +     V+ GR+ H + IK      I V++AL+S+Y++ G    A  VFE  ++ + V+
Sbjct: 511 CACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVS 570

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           + +M+SG A+    ++A+E FR M    + +D V+  +V+  C   G  VE   +     
Sbjct: 571 WNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQY----- 625

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
            F   V   +++           +     ++D+Y++ G +D    +  ++P
Sbjct: 626 -FDSMVRDHKIN---------PTMEHYACMVDLYSRAGKLDETMSLIRDMP 666



 Score = 45.8 bits (107), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 33/155 (21%), Positives = 70/155 (45%), Gaps = 1/155 (0%)

Query: 51  HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
           H  I   +A++S   +  +++ A  +F+   +R++VSWN++IS   ++G   KA+  + +
Sbjct: 534 HDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQ 593

Query: 111 MSNEGFVPTHIT-LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           M   G     +T LA +   +   L VE  +    +V    ++  +     ++ LY++ G
Sbjct: 594 MEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAG 653

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
                + +  +M  P        + G  +  + VE
Sbjct: 654 KLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVE 688



 Score = 42.7 bits (99), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 4/109 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  HA  ++    D   + + L+ +YS+  N  SAQ +F++   +D+ SWN+++S   +
Sbjct: 521 GRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQ 580

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
                 A + F +M    +    V++  +I     NGL  +    ++ M
Sbjct: 581 HGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSM 629


>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 628

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 177/529 (33%), Positives = 301/529 (56%), Gaps = 38/529 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G Q+H   IK+GF++++++ ++L+DMY K G + SA+ +F  +P R+VV+WN +I+GY  
Sbjct: 98  GIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLH 157

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------------ 357
                 AIEL   M   G +P   +   +LV C R  D K G                  
Sbjct: 158 VGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVV 217

Query: 358 -----------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                            R MFD MP  ++ +W +M++ Y+  +    A+ L R+MQ  G+
Sbjct: 218 GTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGI 277

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE- 459
           + +  T   +LSS ++   L+  KQVH   ++     ++Y+   L+ +YS+C  + L + 
Sbjct: 278 RLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDF 337

Query: 460 -RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            +V   +   D + WN++I GLS       A   F +MRQ  +    F+F +VL +   +
Sbjct: 338 NKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMI 397

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           S+  +G+Q+HA + K GY +++ V + L+ MY +CG I  A++ F +M   + ++WN ++
Sbjct: 398 STLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLL 457

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            G A +GYG EAV L++ M  SGVKPD+ TF+ +L+AC H GL+D G+E F+ M+ D+ +
Sbjct: 458 SGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDYSL 517

Query: 639 E-PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           E P  +HY+ M+D   RAG+  EAE  I+ MP +  P +++ LLS+C++H NV +A R A
Sbjct: 518 ESPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRCA 577

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++L ++ P +   Y LL+N+ +++G WD++ ++R++M +  + K+P YS
Sbjct: 578 KKLLQMCPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYS 626



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 211/455 (46%), Gaps = 86/455 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH+ I++ G   + ++C+ L+++Y KC    SAQ                       
Sbjct: 98  GIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQ----------------------- 134

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   +LFDEMP RNVV+WN+LIS  +  G  E A+ ++ +M   G  PT  ++++V
Sbjct: 135 --------RLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAV 186

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV-FEEMSEPN 185
                 + D + G + HGL +K G   NI V   L+ LY+K GW   A  + F+ M E N
Sbjct: 187 LVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSK-GWNIDASRLMFDLMPERN 245

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +T+T+M++G A   + V A+ + R M R  + ++ V+ + +L              F+ 
Sbjct: 246 IITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLL------------SSFSS 293

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK--NGDMDSAEVIFSNLPERSV 303
           S++      H +QVHC  I+ G E++ +L  +L+ +Y++  +  ++    + S +     
Sbjct: 294 SNDL----DHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQ 349

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------- 348
           +SWN +I G         A++   +M+  G + D  T  ++L A                
Sbjct: 350 ISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHAL 409

Query: 349 --------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                R G I   + +F  M    V SWN++LS  +     +EA
Sbjct: 410 VLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREA 469

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           ++LF +M+  GVKPD TT  ++LS+C  +G+L+ G
Sbjct: 470 VELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDKG 504



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 142/276 (51%), Gaps = 2/276 (0%)

Query: 349 VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
           +RS  + T        P     S N+ ++  +  +     +KL  ++Q  G  P    L 
Sbjct: 24  LRSRAVTTQTNRLALFPGNDFFSCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILN 83

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
            ++SSCA  G +  G Q+H+  +K     + Y+ S L+ +Y KC     A+R+F  +P  
Sbjct: 84  RMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHR 143

Query: 469 DIVCWNSMIAG-LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
           ++V WNS+I+G L +   +I A   F +M +  + PT FS + VL  C ++  +  G QV
Sbjct: 144 NVVTWNSLISGYLHVGCPEI-AIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQV 202

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H    K G+  +I VG+ LI++Y K  +I  +R  FD+M  +N +TW  M+ GYA     
Sbjct: 203 HGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQP 262

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
             A+ L +DM   G++ + +T+  +L++ S S  +D
Sbjct: 263 VAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLD 298



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 127/256 (49%), Gaps = 16/256 (6%)

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
              Q++Q+   PT      ++SSCAK  S F G Q+H+ I K G+ +++++ SAL++MY 
Sbjct: 66  LLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYG 125

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCG +  A++ FD M  +N VTWN +I GY   G  + A+ L+ +M+  G+ P   +  A
Sbjct: 126 KCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSA 185

Query: 612 ILTACSHSGLVDVGVEIFN-SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
           +L  C       +G+++   SM+       ++   TC+ID   +  +   + ++ D MP 
Sbjct: 186 VLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVG--TCLIDLYSKGWNIDASRLMFDLMP- 242

Query: 671 KDDPVIWEVLLSS---CRLHANVRLAKRAAEEL-FRLDPKNSAPYSLLANIYSSLGRWD- 725
           + + + W  +++    C+      +  R  + L  RL   N   Y+ L + +SS    D 
Sbjct: 243 ERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRL---NYVTYNCLLSSFSSSNDLDH 299

Query: 726 ----DLRAVRELMSEN 737
                 R +RE +  N
Sbjct: 300 CKQVHCRIIREGLESN 315



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 127/295 (43%), Gaps = 49/295 (16%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H  I+R GL  +++L   L+ +YS                             +C S
Sbjct: 301 KQVHCRIIREGLESNSYLEVTLVTVYS-----------------------------ECSS 331

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
             LE   K+   +   + +SWN +I  L   G  E AL  ++KM   G      T  SV 
Sbjct: 332 SSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVL 391

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           +A   +  ++ G++ H LV+K G   N+ V N L+S+YA+CG    A  VF  M   + +
Sbjct: 392 RAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVI 451

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC---GVESDVFA 244
           ++ +++SG A      EA+E+F  M R  V  D+ +   VL  C   G    G+E   F 
Sbjct: 452 SWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDKGLE--YFD 509

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
              N +S              L      H S S++D++++ G +  AE   + +P
Sbjct: 510 LMRNDYS--------------LESPTTEHYS-SMVDLFSRAGYLSEAEDFINTMP 549


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 222/779 (28%), Positives = 377/779 (48%), Gaps = 86/779 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA I ++ +    F+ + L+ +Y  C +      L D                   
Sbjct: 17  GKEVHARICKSAMDRGPFMGDLLVRMYVDCGS------LID------------------- 51

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A   FD MP ++ ++W  LI A  + G  E+AL ++  M  EG  P +    +V
Sbjct: 52  ------AKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAV 105

Query: 127 FKASTALLDV-EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A +A  ++ E GRR HG++    ++ + YV+  LL +Y KC   + A  VF+ +    
Sbjct: 106 LGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKR 165

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-EGCGVESDVFA 244
            V + AM++  A+ D   +A+++F  M+ + V  + ++   VL  C++ +   V   V  
Sbjct: 166 VVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKL 225

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
             + +   ++H               D   + +L++ Y   GD++ A   FS      ++
Sbjct: 226 CVEEREHDHLH---------------DSSFATALVNFYGSCGDLEQAFRAFSR-HRLELI 269

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------ 358
               MI  Y Q+ +  +A+EL + M   G + D +  + +L AC     ++ GR      
Sbjct: 270 LATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFM 329

Query: 359 -----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                        E+F SM    V SWN +++++ Q   H EA+
Sbjct: 330 REIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEAL 389

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            L   MQ  GVK D+ +    L  CA    L  G+ +H+  +++    D  + + ++ +Y
Sbjct: 390 HLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMY 449

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS-LDIEAFMFFKQMRQNEMYPTQFSF 508
             C+  + A RVF  +   D V WN+MI   +    L  EA + F+QM+ +   P   SF
Sbjct: 450 GSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISF 509

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
              LS+CA  +S  +G+ +H +I + G  +++ V +A++ MY K G +  AR+ F  M  
Sbjct: 510 VAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPL 569

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            + ++WN MI  +AQ+G+ D+ +R ++ M   G  P+D+TFV++++ACSH GLV  GV++
Sbjct: 570 PDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQL 629

Query: 629 FNSMQLDH-GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           F S+  D   + P  +HY CM+D + RAG    AE  I   P K D VI   +L + ++H
Sbjct: 630 FVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVH 689

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +V  A+++AE L  L P  SA Y +L+N+Y  +G+ D+   +R LM E  I K+PA+S
Sbjct: 690 KDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFS 748



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 1/199 (0%)

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L+ GK+VHA   K+A     ++   L+ +Y  C     A+  F R+P  D + W  +I  
Sbjct: 14  LDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRA 73

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVN 538
                   +A   F+ M+   + P   +F  VL +C+      + GR++H  +      +
Sbjct: 74  HGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMES 133

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           D +V + L+ MY KC  +  AR+ FD +  K  V WN MI  YAQ  + ++A++++  M+
Sbjct: 134 DHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAML 193

Query: 599 ASGVKPDDITFVAILTACS 617
             GVK + ITF+ +L ACS
Sbjct: 194 LEGVKAERITFIGVLDACS 212



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 7/179 (3%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +A +L   A   S   G++VHA+I K       F+G  L+ MY  CG +  A+  FD M 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG-LVDVGV 626
            ++ +TW  +I  + Q G  ++A+ L++ M   GV P +  FVA+L ACS    L++ G 
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 627 EIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            I   ++   G     DHY  T ++   G+     +A  + D +  K   V W  ++++
Sbjct: 121 RIHGVLR---GTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHK-RVVEWNAMITA 175


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 197/659 (29%), Positives = 330/659 (50%), Gaps = 59/659 (8%)

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +FK ST+   + H  + H  ++  G   +I +   L    +  G   +A  +F  +  P+
Sbjct: 26  LFKRSTS---ISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPD 82

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
              F  +M G +  +    +L +F   +RK+  +   S +    + A  G          
Sbjct: 83  VFLFNVLMRGFSVNESPHSSLAVFA-HLRKSTDLKPNSSTYAFAISAASGF--------- 132

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D++    +HGQ      I  G +++L L ++++ MY K   ++ A  +F  +PE+  + 
Sbjct: 133 RDDRAGCVIHGQ-----AIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTIL 187

Query: 306 WNVMIAGYGQKYQSTKAIELLQRM--KSCGFEPDEVTSINMLVACV-------------- 349
           WN MI+GY +     ++I++ + +  +SC    D  T +++L A                
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCT-RLDTTTLLDILPAVAELQELRLGMQIHSL 246

Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + G IK    +F     P + ++NAM+  Y+ +   + +
Sbjct: 247 ATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELS 306

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           + LF+E+   G K   +TL  ++     + ++ +   +H  SLK+       V++ L  +
Sbjct: 307 LSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYA---IHGYSLKSNFLSHTSVSTALTTV 363

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           YSK    E A ++F   PE  +  WN+MI+G + N L  +A   F++M+ +E  P   + 
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTI 423

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
             +LS+CA+L +   G+ VH  +    + + I+V +ALI MY KCG I  AR+ FD M  
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPK 483

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           KN VTWN MI GY  +G+G EA+ ++ +M+ SG+ P  +TF+ +L ACSH+GLV  G EI
Sbjct: 484 KNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEI 543

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           FNSM   +G EP + HY C++D LGRAGH   A   I+ MP +  P +WE LL +CR+H 
Sbjct: 544 FNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHK 603

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           +  LA+  +E+LF LDP N   + LL+NI+S+   +     VR+   +  + K P Y+L
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTL 662



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 144/590 (24%), Positives = 265/590 (44%), Gaps = 80/590 (13%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           HA I+ +G  +D  L  +L +  S     + A+ +F  +   D++ +N ++         
Sbjct: 40  HAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRG------- 92

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
            F+    +E P  ++  + +L     R   + K              P   T A    A+
Sbjct: 93  -FS---VNESPHSSLAVFAHL-----RKSTDLK--------------PNSSTYAFAISAA 129

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
           +   D   G   HG  I  G D  + + + ++ +Y K    + A  VF+ M E + + + 
Sbjct: 130 SGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWN 189

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVS-IDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            M+SG  K +  VE++++FR +I ++ + +D+ +L  +L   A                +
Sbjct: 190 TMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA----------------E 233

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G Q+H L  K G  +  ++    + +Y+K G +  A  +F       +V++N M
Sbjct: 234 LQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAM 293

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN--------MLVACV------------ 349
           I GY    ++  ++ L + +   G +    T ++        ML+  +            
Sbjct: 294 IHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSH 353

Query: 350 ------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                       +  +I++ R++FD  P  S+ SWNAM+S Y+Q+   ++AI LFREMQ 
Sbjct: 354 TSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQN 413

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
               P+  T+  ILS+CA +G L  GK VH     T      YV++ LIG+Y+KC     
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A R+F  +P+ + V WN+MI+G  L+    EA   F +M  + + PT  +F  VL +C+ 
Sbjct: 474 ARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSH 533

Query: 518 LSSSFQGRQV-HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
                +G ++ ++ I + G+   +   + ++++  + G +  A QF + M
Sbjct: 534 AGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAM 583



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 144/297 (48%), Gaps = 19/297 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            A+ +   K +++E A KLFDE PE+++ SWN +IS   +NGL E A+S++ +M N  F 
Sbjct: 358 TALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFS 417

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  +T+  +  A   L  +  G+  H LV     + +IYV+ AL+ +YAKCG    A  +
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+ M + NEVT+  M+SG        EAL +F  M+   ++   V+   VL  C+  G  
Sbjct: 478 FDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAG-- 535

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
               +  + D  F+  +H         + GFE  +     ++D+  + G +  A      
Sbjct: 536 ----LVKEGDEIFNSMIH---------RYGFEPSVKHYACVVDILGRAGHLQRALQFIEA 582

Query: 298 LPERSVVS-WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +P +   S W  ++ G  + ++ T     +   K    +PD V   ++L++ + S D
Sbjct: 583 MPIQPGPSVWETLL-GACRIHKDTNLARTVSE-KLFELDPDNV-GYHVLLSNIHSAD 636



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 32/176 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  +         ++   LI +Y+KC +   A+ LFD MP K+  +WN ++S    
Sbjct: 439 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMIS---- 494

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  Y L                     +G  ++AL+++++M N G  PT +T   V
Sbjct: 495 ------GYGL---------------------HGHGQEALTIFSEMLNSGIAPTPVTFLCV 527

Query: 127 FKA-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
             A S A L  E     + ++ + G + ++     ++ +  + G  + A+   E M
Sbjct: 528 LYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAM 583


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 213/685 (31%), Positives = 327/685 (47%), Gaps = 127/685 (18%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN------------- 185
            R  HG VI  G     ++ N L+ +Y K     +A  +F+E+ +P+             
Sbjct: 32  ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSA 91

Query: 186 --------------------EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
                                V + AM++G +  +    A+E+FR M       D  + +
Sbjct: 92  LGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFA 151

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK- 284
           SVL               + S   F       Q+H   +K G E    + N+LL +Y K 
Sbjct: 152 SVL---------------SASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKC 196

Query: 285 --------NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
                   +  M SA  +F  +P+R+   W  +I GY                       
Sbjct: 197 ASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGY----------------------- 233

Query: 337 DEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                       VR+GD+   RE+ D+M      +WNAM+S Y      ++A+ LFR+M+
Sbjct: 234 ------------VRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMR 281

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN----YVASGLIGIYSKC 452
             GV+ D +T   ++S+CA  G    GKQVHA  LK   + D      V + LI +Y K 
Sbjct: 282 LLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKY 341

Query: 453 QRNELAERVFHRIPELDIVCWNS-------------------------------MIAGLS 481
            + + A ++F+ +P  DI+ WN+                               MI+GL+
Sbjct: 342 GKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLA 401

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N    +A   F QM+ +   P  ++FA  +++C+ L +   GRQ+HAQI   G+ + + 
Sbjct: 402 QNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLS 461

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           VG+A+I MY +CG +  AR  F  M   + V+WN MI    Q+G+G +A+ LY+ M+  G
Sbjct: 462 VGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEG 521

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           + PD  TF+ +L+ACSH+GLV+ G   FNSM  ++G+ P  DHY  MID   RAG F +A
Sbjct: 522 ILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDA 581

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           + +ID MP +    IWE LL+ CR H N+ L   AAE+LF+L P++   Y LL+N+Y+SL
Sbjct: 582 KNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASL 641

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           GRW+D+   R+LM +  + K+PA S
Sbjct: 642 GRWNDVARTRKLMRDRGVKKEPACS 666



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/577 (25%), Positives = 258/577 (44%), Gaps = 109/577 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            + +H H++ +G      + NRLI++Y K ++   A+ LFD++P  D+ +   +++A   
Sbjct: 32  ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSA 91

Query: 67  SDDLEFAYKLFDEMP--ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
             +L+ A ++F+E P   R+ V +N +I+          A+ ++  M    F P   T A
Sbjct: 92  LGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFA 151

Query: 125 SVFKASTALLDVEHGRRC---HGLVIKIGLDKNIYVANALLSLYAKCGWTKH-------- 173
           SV  AST +   E  R+C   HG V+K G++    V NALLS+Y KC  +          
Sbjct: 152 SVLSASTLIFYDE--RQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMA 209

Query: 174 -AVPVFEEMSEPNEVTFTAMMSGLAKT----------DRVVE------------------ 204
            A  +F+EM + NE  +T +++G  +           D + E                  
Sbjct: 210 SARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGL 269

Query: 205 ---ALEMFRLMIRKAVSIDSVSLSSVLGVCAREG---CGVESDVFA-----QSDNKFSRN 253
              AL +FR M    V +D  + +SV+  CA  G    G +   +        D  F  +
Sbjct: 270 FEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLS 329

Query: 254 VHGQQVHCLTIKLG---------FE---ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           V G  +  L  K G         +E    D+   N+LL  Y   G M+ A+  F+ +PE+
Sbjct: 330 V-GNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEK 388

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
           ++++W VMI+G  Q     +A++L  +MK  G+EP++      + AC             
Sbjct: 389 NLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLH 448

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  R G ++  R MF +MP     SWN+M+++  Q  +  
Sbjct: 449 AQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGV 508

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT---ASHIDNYVAS 443
           +AI+L+ +M   G+ PDR T   +LS+C+  G++E G +   + L+    A   D+Y  +
Sbjct: 509 KAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHY--A 566

Query: 444 GLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
            +I ++ +  +   A+ V   +P E     W +++AG
Sbjct: 567 RMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAG 603



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 214/451 (47%), Gaps = 44/451 (9%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTH---------SAQHLFDKMPHKDIYSWNAI 60
           +H  +++ G+     + N L+ +Y KC ++          SA+ LFD+MP ++ + W  +
Sbjct: 170 MHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTL 229

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           ++   ++ DL  A ++ D M E+  ++WN +IS  + +GL E AL+++ KM   G     
Sbjct: 230 ITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDE 289

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKN----IYVANALLSLYAKCGWTKHAVP 176
            T  SV  A         G++ H  ++K  L+ +    + V N L++LY K G    A  
Sbjct: 290 STYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARK 349

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F EM   + +T+  ++SG     R+ EA   F  M  K +   +V +S +    A+ G 
Sbjct: 350 IFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGL----AQNGF 405

Query: 237 GVES---------DVFAQSDNKFSRNV----------HGQQVHCLTIKLGFEADLHLSNS 277
           G ++         D +  +D  F+  +          +G+Q+H   + LG ++ L + N+
Sbjct: 406 GEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNA 465

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           ++ MYA+ G +++A  +F  +P    VSWN MIA  GQ     KAIEL ++M   G  PD
Sbjct: 466 MITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPD 525

Query: 338 EVTSINMLVACVRSGDIKTGREMFDSM-----PSPSVSSWNAMLSSYSQSENHKEAIKLF 392
             T + +L AC  +G ++ G   F+SM      +P    +  M+  + ++    +A  + 
Sbjct: 526 RRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVI 585

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESG 423
             M F    P    L   L+ C   G ++ G
Sbjct: 586 DSMPFEARAPIWEAL---LAGCRTHGNMDLG 613



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 177/361 (49%), Gaps = 22/361 (6%)

Query: 7   GKLLHAHILRNGLFDDT-FLC---NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           GK +HA+IL+N L  D  FL    N LI LY K      A+ +F +MP KDI +WN +LS
Sbjct: 308 GKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLS 367

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
               +  +E A   F +MPE+N+++W  +IS L +NG  E+AL ++N+M  +G+ P    
Sbjct: 368 GYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYA 427

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            A    A + L  +E+GR+ H  ++ +G D  + V NA++++YA+CG  + A  +F  M 
Sbjct: 428 FAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMP 487

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + V++ +M++ L +    V+A+E++  M+++ +  D  +  +VL  C+  G   E + 
Sbjct: 488 FVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNR 547

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
           +  S               +    G          ++D++ + G    A+ +  ++P E 
Sbjct: 548 YFNS---------------MLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEA 592

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI--NMLVACVRSGDIKTGRE 359
               W  ++AG          IE  +++     + D    +  NM  +  R  D+   R+
Sbjct: 593 RAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRK 652

Query: 360 M 360
           +
Sbjct: 653 L 653


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 198/630 (31%), Positives = 337/630 (53%), Gaps = 52/630 (8%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KN    N ++S + K G    A  +F+ M E   V++T ++ G  ++++  EA  ++  M
Sbjct: 72  KNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADM 131

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
            R  +  D V+L ++L              F + + K   NV   Q+H   IKLG+E +L
Sbjct: 132 RRGGIEPDYVTLVTLLSG------------FGELETK---NV-IVQIHTHVIKLGYEYNL 175

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            + NSL+D Y K   +  A  +F ++  +  V++N ++ GY  +  + +AIEL   + + 
Sbjct: 176 MVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNS 235

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGRE--------------------------------- 359
           G +P + T   +L A V   D K G++                                 
Sbjct: 236 GIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEV 295

Query: 360 --MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
             +F  MP     S+N +++SY+ +   KE+  LFR++QF      +   A +LS   + 
Sbjct: 296 GKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSS 355

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
             L  G+Q+H  ++   ++ ++ V + L+ +Y+KC  ++ A+++F  I     V W +MI
Sbjct: 356 LNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMI 415

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
           +         E    F  MR+  +   Q +FA++L +CA L+S   GRQ+H+ + + G++
Sbjct: 416 SAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFM 475

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           ++++ GSAL++ Y KCG +  A + F  M  +N+V+WN +I  YAQNG  D  +  ++ M
Sbjct: 476 SNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQM 535

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           I SG KPD ++F+++L+ACSH G V+  +  FNSM   + V P  +HYT M+D L R G 
Sbjct: 536 IQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGR 595

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL-DPKNSAPYSLLAN 716
           F EAE L+ EMP +   ++W  +L+SCR+H N  LAK+AA+ LF + D +++APY  ++N
Sbjct: 596 FDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSN 655

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           IY+  G+WD++  V++ M +  + K PAYS
Sbjct: 656 IYAVAGQWDNVAKVKKAMRDRGVRKVPAYS 685



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 166/648 (25%), Positives = 285/648 (43%), Gaps = 94/648 (14%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           L+ AHI++ G   +T   N  +  + +  +   A  +FD+MP K+  S N ++S   K  
Sbjct: 29  LIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFG 88

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
            L  A +LFD M ER  VSW  LI   +++   ++A  +Y  M   G  P ++TL ++  
Sbjct: 89  KLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLS 148

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
               L       + H  VIK+G + N+ V N+L+  Y K      A  +F+ M   + VT
Sbjct: 149 GFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVT 208

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           F ++M+G +      EA+E+F  +    +     + +++L           S      D 
Sbjct: 209 FNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALL-----------SAAVGLDDT 257

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
           KF     GQQVH   +K  F  ++ + N+LLD Y+K+  +D    +F  +PE   +S+NV
Sbjct: 258 KF-----GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNV 312

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--------- 359
           +I  Y    Q  ++ +L ++++   F+  +     +L     S +++ GR+         
Sbjct: 313 VITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVG 372

Query: 360 --------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                     +FD++   S   W AM+S+Y Q   H+E I +F 
Sbjct: 373 ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFS 432

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           +M+  GV  D+ T A IL +CA +  +  G+Q+H+  +++    + Y  S L+  Y+KC 
Sbjct: 433 DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
               A + F  +PE + V WN++I+  + N         F+QM Q+   P   SF +VLS
Sbjct: 493 CMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           +C+                                    CG +  A   F+ M     VT
Sbjct: 553 ACS-----------------------------------HCGFVEEALWHFNSMTQIYEVT 577

Query: 574 -----WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
                +  M+    +NG  DEA +L  +M     +P +I + ++L +C
Sbjct: 578 PKREHYTSMVDVLCRNGRFDEAEKLMTEM---PFEPSEIMWSSVLNSC 622



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 183/419 (43%), Gaps = 69/419 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   +  G   ++ + N L+++Y+KCN    AQ +FD +               CK
Sbjct: 361 GRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA--------------CK 406

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S                  V W  +ISA V+ G  E+ ++V++ M   G      T AS+
Sbjct: 407 S-----------------TVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASI 449

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A   L  +  GR+ H L+I+ G   N+Y  +ALL  YAKCG    A+  F EM E N 
Sbjct: 450 LRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNS 509

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A++S  A+   V   L  F+ MI+     DSVS  SVL  C+   CG   +     
Sbjct: 510 VSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSH--CGFVEEALWHF 567

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVS 305
           ++         Q++ +T K       H + S++D+  +NG  D AE + + +P E S + 
Sbjct: 568 NSM-------TQIYEVTPKRE-----HYT-SMVDVLCRNGRFDEAEKLMTEMPFEPSEIM 614

Query: 306 WNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINM----LVACVRSGDIKTGR 358
           W+ ++     +     + KA + L  M+      D    INM     VA       K  +
Sbjct: 615 WSSVLNSCRIHKNHELAKKAADRLFNMEDL---RDAAPYINMSNIYAVAGQWDNVAKVKK 671

Query: 359 EMFD----SMPSPSVSSWNAMLSSYSQSE-NHKEAIKLFR-------EMQFRGVKPDRT 405
            M D     +P+ S          +S ++ +H E  K+ R       EM+ +G KPD T
Sbjct: 672 AMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTT 730



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 38/252 (15%)

Query: 400 VKPDRTTL---AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
           +KP R TL    ++ +S A    L S   + A  +KT  + +   ++  +  +   +R +
Sbjct: 1   MKPYRATLFQNLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNF--LERGD 58

Query: 457 L--AERVFHRIPELDIVCWNSMIAG-LSLNSL---------------------------- 485
           L  A +VF ++P  + +  N MI+G L    L                            
Sbjct: 59  LVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQS 118

Query: 486 --DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               EAF  +  MR+  + P   +  T+LS   +L +     Q+H  + K GY  ++ V 
Sbjct: 119 NQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVC 178

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           ++L++ YCK   +Y A Q F  M  K+TVT+N ++ GY+  G  +EA+ L+ ++  SG+K
Sbjct: 179 NSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIK 238

Query: 604 PDDITFVAILTA 615
           P D TF A+L+A
Sbjct: 239 PSDFTFAALLSA 250


>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
 gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
          Length = 772

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 224/785 (28%), Positives = 374/785 (47%), Gaps = 97/785 (12%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL-SAQCKSD 68
           +HA  + +GL     +  +L+  YS       A   F   P  D + WN+++ +  C SD
Sbjct: 31  VHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASD 90

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
            +                                 AL+ + +M      P+  T+     
Sbjct: 91  FV--------------------------------AALNAHRRMLASSARPSPFTVPLAAS 118

Query: 129 ASTALLDVEHGRRCHGLVIKIGL----DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           A+  L  +  G   H   ++ GL      ++ V ++L+ +YA+CG  + AV +FEEM E 
Sbjct: 119 AAAELGALGVGASVHAYCVRYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFEEMRER 178

Query: 185 NEVTFTAMMSGLAKTDRVVEAL----EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           + V +TA++SG  +     + L    EM RL        +S ++ S L     E CGV  
Sbjct: 179 DVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGL-----EACGVLD 233

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           ++ +           G+ +H   +K+G      + ++L  MY+K    + A  +F  LPE
Sbjct: 234 ELNS-----------GRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPE 282

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-- 358
           + VVSW  +I  Y  +    +A+EL Q M   G +PD+V    +L     SG++  G+  
Sbjct: 283 KDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAF 342

Query: 359 ---------------------------------EMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                             +F  +      SWN M+  Y ++   
Sbjct: 343 HAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCD 402

Query: 386 KEAIKLFREMQFRGVKP---DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
            + ++L+REMQFR       D  +L   +SSC+ +  L  G+  H  S+K     D+ VA
Sbjct: 403 VKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVA 462

Query: 443 SGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
           + LIG+Y +C + + A ++F     + D+V WN++I+  +       A   + QM    +
Sbjct: 463 NVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGL 522

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P   +  TV+S+CA L +  +G ++H+ +++ G+  D+ + +ALI+MY KCG +  AR+
Sbjct: 523 TPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARR 582

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            FD M   + V WN MI GY  +G   +A+ L+  M    +KP+ +TF+AIL+AC HSGL
Sbjct: 583 IFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGL 642

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           ++ G ++F  M   + +EP L HY CM+D LG++GH  EAE ++  MP + D  IW  LL
Sbjct: 643 LEEGRQLFTRMG-KYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLL 701

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           S+C+LH +  +  R A++ F  D +N   Y L++N Y S  +WD++  +RE M  + + K
Sbjct: 702 SACKLHDDFEMGLRIAKKAFASDAENEGYYILISNSYGSAKKWDEIEKLREAMKNHGVQK 761

Query: 742 DPAYS 746
              +S
Sbjct: 762 GAGWS 766



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 143/571 (25%), Positives = 260/571 (45%), Gaps = 88/571 (15%)

Query: 7   GKLLHAHILRNGLF----DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           G  +HA+ +R GL         + + L+ +Y++C     A  LF++M  +D+ +W A++S
Sbjct: 129 GASVHAYCVRYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVS 188

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              ++ +     +   EM               VR   + KA             P   T
Sbjct: 189 GCVRNGECGDGLRYLVEM---------------VRLAGDGKAR------------PNSRT 221

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + S  +A   L ++  GR  HG  +K+G+  +  V +AL S+Y+KC  T+ A  +F E+ 
Sbjct: 222 MESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELP 281

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           E + V++T+++        + EA+E+F+ M+   +  D V +S +L      G       
Sbjct: 282 EKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSG------- 334

Query: 243 FAQSDNKFSRNVHGQQV-HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                     NVHG +  H + +K  F  ++ + N+L+ MY K   +D+A  +F  L +R
Sbjct: 335 ----------NVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQR 384

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMK---SCGFEPDEVTSINMLVACVRSGDIKTGR 358
              SWN+MI GY +     K +EL + M+   +  F  D  + ++ + +C R  +++ GR
Sbjct: 385 DADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGR 444

Query: 359 EM----------------------------FD--------SMPSPSVSSWNAMLSSYSQS 382
                                         FD        +     V +WN ++SSY+  
Sbjct: 445 SAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHL 504

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
            +   A+ L+ +M   G+ P+ TTL  ++S+CA +  LE G+++H+   +     D  + 
Sbjct: 505 GHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSIN 564

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + LI +Y+KC +   A R+F  + + D+V WN MI+G  ++    +A   F +M    + 
Sbjct: 565 TALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIK 624

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           P   +F  +LS+C       +GRQ+  ++ K
Sbjct: 625 PNGVTFLAILSACCHSGLLEEGRQLFTRMGK 655



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 227/518 (43%), Gaps = 87/518 (16%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ LH + ++ G+ D   + + L  +YSKC++T  A  LF ++P KD+ SW +++   C
Sbjct: 237 SGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYC 296

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               +  A +LF EM E  +   + L+S L+            + + N G          
Sbjct: 297 WRGLIREAMELFQEMMESGLQPDDVLVSCLL------------SGLGNSG---------- 334

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                    +V  G+  H +++K     N+ V NAL+S+Y K     +A  VF  + + +
Sbjct: 335 ---------NVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRD 385

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSI--DSVSLSSVLGVCAREGCGVESDV 242
             ++  M+ G  K    V+ LE++R M  R       D+ SL S +  C+R    VE  +
Sbjct: 386 ADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRL---VELRL 442

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+  HC +IK   + D  ++N L+ MY + G  D A  IF     + 
Sbjct: 443 -------------GRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKG 489

Query: 303 -VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
            VV+WN +I+ Y     S  A+ L  +M + G  P+  T I ++ AC             
Sbjct: 490 DVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIH 549

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G + T R +FDSM    V +WN M+S Y      K
Sbjct: 550 SYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAK 609

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           +A++LF +M+   +KP+  T   ILS+C   G+LE G+Q+     K +   +    + ++
Sbjct: 610 QALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGKYSLEPNLKHYACMV 669

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
            +  K    + AE +   +P E D   W ++++   L+
Sbjct: 670 DLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLSACKLH 707



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 207/440 (47%), Gaps = 52/440 (11%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK  HA I++    D+  + N LI +Y K     +A  +F  +  +D  SWN ++   C
Sbjct: 338 GGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYC 397

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K+       +L+ EM  R+                               F+    +L S
Sbjct: 398 KAGCDVKCLELYREMQFRDTYE----------------------------FLCDANSLVS 429

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EP 184
              + + L+++  GR  H   IK  LD++  VAN L+ +Y +CG   HA  +F     + 
Sbjct: 430 AISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKG 489

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + VT+  ++S  A       A+ ++  M+ + ++ +S +L +V+  CA        ++ A
Sbjct: 490 DVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACA--------NLVA 541

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+++H    ++G++ D+ ++ +L+DMYAK G + +A  IF ++ +  VV
Sbjct: 542 LE--------RGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVV 593

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           +WNVMI+GYG   ++ +A+EL  +M+    +P+ VT + +L AC  SG ++ GR++F  M
Sbjct: 594 AWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRM 653

Query: 365 PS----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P++  +  M+    +S + +EA  +   M    V+PD      +LS+C      
Sbjct: 654 GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMP---VEPDGGIWGTLLSACKLHDDF 710

Query: 421 ESGKQVHAASLKTASHIDNY 440
           E G ++   +  + +  + Y
Sbjct: 711 EMGLRIAKKAFASDAENEGY 730



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           +VHA ++ +       + + L+  YS   R  LA   F   P  D   WNS+I      S
Sbjct: 30  RVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCAS 89

Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV----NDI 540
             + A    ++M  +   P+ F+     S+ A+L +   G  VHA   + G +      +
Sbjct: 90  DFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSV 149

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA- 599
            V S+L+ MY +CG +  A + F+ M  ++ V W  ++ G  +NG   + +R   +M+  
Sbjct: 150 AVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRL 209

Query: 600 ---SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
                 +P+  T  + L AC   G++D      NS +  HG
Sbjct: 210 AGDGKARPNSRTMESGLEAC---GVLDE----LNSGRCLHG 243


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 211/653 (32%), Positives = 335/653 (51%), Gaps = 60/653 (9%)

Query: 136 VEHGRRCHGLVIKIGL-DKNIYVA-NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           +   +  HGLV+K    DK++ V  N    +Y+KC   + A  VF+EM + N  ++T M+
Sbjct: 134 IREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMI 193

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            G  +     +  + F  M+   +  D  + S+++  C     G++S             
Sbjct: 194 VGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCI----GLDSLEL---------- 239

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+ VH   +  GF   + +S SLL+MYAK G ++ +  +F+ + E + VSWN MI+G 
Sbjct: 240 --GKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGC 297

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSI-----------------------------NM 344
                  +A +L  RMK+    P+  T +                             N+
Sbjct: 298 TSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNV 357

Query: 345 LVACV------RSGDIKTGREMFDS--MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           LV         + G +   R +FD+  +     + WNAM+S YSQS   +EA++L+ +M 
Sbjct: 358 LVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMC 417

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS---GLIGIYSKCQ 453
             G+  D  T   + ++ AA   L+ G+ VH   LK    +D  V S    +   YSKC 
Sbjct: 418 QNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCG--LDLMVVSVNNAIADAYSKCG 475

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
             E   +VF R+ E DIV W +++   S +SL  EA   F  MR+    P QF+F++VL 
Sbjct: 476 FLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLI 535

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           SCA L     GRQVH  + K G   +  + SALI+MY KCG I  A + FD +   + V+
Sbjct: 536 SCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVS 595

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           W  +I GYAQ+G  ++A++L++ M  SG+K + +T + +L ACSH G+V+ G+  F  M+
Sbjct: 596 WTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQME 655

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
             +GV P ++HY C+ID LGR G   +A   I +MP + + ++W+ LL  CR+H NV L 
Sbjct: 656 DGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELG 715

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + AA ++  + P+ SA Y LL+N Y   G ++D  ++R +M +  + K+P YS
Sbjct: 716 EIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYS 768



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 168/622 (27%), Positives = 290/622 (46%), Gaps = 70/622 (11%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K  +   A  +FDEMP+RNV SW  +I     +GL       + +M N G +P     ++
Sbjct: 167 KCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSA 226

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           + ++   L  +E G+  H  ++  G   +I+V+ +LL++YAK G  + +  VF  M+E N
Sbjct: 227 IIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHN 286

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +V++ AM+SG       +EA ++F  M   A + +  +L SV                ++
Sbjct: 287 QVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSV----------------SK 330

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF-SNLPERSV- 303
           +  K      G++V     +LG E ++ +  +L+DMY+K G +  A  +F +N     V 
Sbjct: 331 AVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVN 390

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------ 357
             WN MI+GY Q   S +A+EL  +M   G   D  T  ++  A   S  ++ G      
Sbjct: 391 TPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGM 450

Query: 358 ------------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                         R++FD M    + SW  ++++YSQS   +E
Sbjct: 451 VLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEE 510

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+  F  M+  G  P++ T + +L SCA++  LE G+QVH    K     +  + S LI 
Sbjct: 511 ALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALID 570

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+KC     A +VF +I   DIV W ++I+G + + L  +A   F++M  + +     +
Sbjct: 571 MYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVT 630

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGY--VNDIFVGSALIEMYCKCGDIYGARQFFDM 565
              VL +C+      +G     Q+E DGY  V ++   + +I++  + G +  A +F   
Sbjct: 631 LLCVLFACSHGGMVEEGLFYFQQME-DGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRK 689

Query: 566 MHGK-NTVTWNEMIHGYAQNG---YGDEAVRLYKDMIASGVKPD-DITFVAILTACSHSG 620
           M  + N + W  ++ G   +G    G+ A R     I S ++P+   T+V +      +G
Sbjct: 690 MPMEPNEMVWQTLLGGCRVHGNVELGEIAAR----KILS-IRPEYSATYVLLSNTYIETG 744

Query: 621 LVDVGVEIFNSMQLDHGV--EP 640
             + G+ + N M+ D GV  EP
Sbjct: 745 SYEDGLSLRNVMK-DQGVKKEP 765



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/515 (24%), Positives = 229/515 (44%), Gaps = 91/515 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++HA I+  G     F+   L+ +Y+K  +                            
Sbjct: 240 GKMVHAQIVMRGFATHIFVSTSLLNMYAKLGS---------------------------- 271

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E +Y +F+ M E N VSWN +IS    NGL  +A  ++ +M N    P   TL SV
Sbjct: 272 ---IEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSV 328

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE--MSEP 184
            KA   L+DV  G+       ++G++ N+ V  AL+ +Y+KCG    A  VF+   ++  
Sbjct: 329 SKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCG 388

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
               + AM+SG +++    EALE++  M +  ++ D  +  SV    A           A
Sbjct: 389 VNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIA-----------A 437

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFE-ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
               +F R VHG     + +K G +   + ++N++ D Y+K G ++    +F  + ER +
Sbjct: 438 SKSLQFGRVVHG-----MVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDI 492

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------- 348
           VSW  ++  Y Q     +A+     M+  GF P++ T  ++L++C               
Sbjct: 493 VSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGL 552

Query: 349 --------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + G I    ++FD + +P + SW A++S Y+Q    ++A
Sbjct: 553 LCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDA 612

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAASLKTASHIDNYVASGL 445
           ++LFR M+  G+K +  TL  +L +C+  G++E G    Q           +++Y    +
Sbjct: 613 LQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYAC--I 670

Query: 446 IGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           I +  +  R + A     ++P E + + W +++ G
Sbjct: 671 IDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 705



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 200/426 (46%), Gaps = 35/426 (8%)

Query: 312 GYGQKYQSTKAIELLQRMKSCG-------------------FEPDEVTSINMLVACVRS- 351
           G  + YQ T+  +L+  ++ C                    FE  ++  +    A V S 
Sbjct: 108 GISETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSK 167

Query: 352 -GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
             + +    +FD MP  +V SW  M+   ++     +  K F EM   G+ PD+   + I
Sbjct: 168 CSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAI 227

Query: 411 LSSCAAMGILESGKQVHAASLKT--ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
           + SC  +  LE GK VHA  +    A+HI  +V++ L+ +Y+K    E +  VF+ + E 
Sbjct: 228 IQSCIGLDSLELGKMVHAQIVMRGFATHI--FVSTSLLNMYAKLGSIEDSYWVFNMMTEH 285

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           + V WN+MI+G + N L +EAF  F +M+     P  ++  +V  +  KL     G++V 
Sbjct: 286 NQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQ 345

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH---GKNTVTWNEMIHGYAQNG 585
               + G   ++ VG+ALI+MY KCG ++ AR  FD      G NT  WN MI GY+Q+G
Sbjct: 346 NCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNT-PWNAMISGYSQSG 404

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE-PILDH 644
              EA+ LY  M  +G+  D  T+ ++  A + S  +  G  + + M L  G++  ++  
Sbjct: 405 CSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFG-RVVHGMVLKCGLDLMVVSV 463

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
              + D   + G   +   + D M  + D V W  L+++   ++   L + A      + 
Sbjct: 464 NNAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVTA---YSQSSLGEEALATFCLMR 519

Query: 705 PKNSAP 710
            +  AP
Sbjct: 520 EEGFAP 525



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 192/413 (46%), Gaps = 54/413 (13%)

Query: 18  GLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLF 77
           G+  +  +   LI++YSKC + H A+ +FD          N I    C  +         
Sbjct: 352 GIEGNVLVGTALIDMYSKCGSLHDARSVFDT---------NFI---NCGVN--------- 390

Query: 78  DEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVE 137
                     WN +IS   ++G  ++AL +Y +M   G      T  SVF A  A   ++
Sbjct: 391 --------TPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQ 442

Query: 138 HGRRCHGLVIKIGLDKNIY-VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
            GR  HG+V+K GLD  +  V NA+   Y+KCG+ +    VF+ M E + V++T +++  
Sbjct: 443 FGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAY 502

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           +++    EAL  F LM  +  + +  + SSVL  CA   C +E               +G
Sbjct: 503 SQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASL-CFLE---------------YG 546

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +QVH L  K G + +  + ++L+DMYAK G +  A  +F  +    +VSW  +I+GY Q 
Sbjct: 547 RQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQH 606

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSS 371
                A++L +RM+  G + + VT + +L AC   G ++ G   F  M       P +  
Sbjct: 607 GLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEH 666

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           +  ++    +     +A++  R+M    ++P+      +L  C   G +E G+
Sbjct: 667 YACIIDLLGRVGRLDDAMEFIRKMP---MEPNEMVWQTLLGGCRVHGNVELGE 716


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 195/661 (29%), Positives = 340/661 (51%), Gaps = 55/661 (8%)

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIG--LDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           A + +   A  D   GR  H  V++ G     + + AN LL+LYAK G    A  +F+ M
Sbjct: 51  ARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGM 110

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV-CAREGCGVES 240
            E N V+F  ++ G A      EA  +FR + R+   ++   L+++L V  A +  G+  
Sbjct: 111 PERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTC 170

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                             +H    KLG + +  + +SL+D Y+  G +  A  +F  +  
Sbjct: 171 -----------------CIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIW 213

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------- 349
           +  V+W  M++ Y +      A+    +M+  G +P+     ++L A V           
Sbjct: 214 KDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGI 273

Query: 350 ------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G I+  R +F+ +P   V  W+ ++S Y+QS  +
Sbjct: 274 HGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQN 333

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++A ++F  M    V P+  +L+ +L +CA +  L+ G+Q+H   +K     + +V + L
Sbjct: 334 EQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNAL 393

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC+  E +  +F  + + + V WN++I G   +    +A   F++MR   +  TQ
Sbjct: 394 MDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQ 453

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +F++VL +CA  +S     Q+H+ IEK  + ND  V ++LI+ Y KCG I  A + F+ 
Sbjct: 454 VTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFES 513

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +   + V+WN +I GYA +G   +A+ L+  M  S  KP+D+TFVA+L+ C  +GLV+ G
Sbjct: 514 IIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQG 573

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
           + +FNSM +DH ++P +DHYTC++  LGRAG  ++A   I ++P    P++W  LLSSC 
Sbjct: 574 LSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCV 633

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
           +H NV L K +AE++  ++P++   Y LL+N+Y++ G  D +  +R+ M    + K+   
Sbjct: 634 VHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGL 693

Query: 746 S 746
           S
Sbjct: 694 S 694



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 154/606 (25%), Positives = 274/606 (45%), Gaps = 71/606 (11%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHK------DIYSWNAILSAQCKSDDLEFAYK 75
           D++ C RL++      +  + + +  ++  +      D +  N +L+   K   L  A +
Sbjct: 46  DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105

Query: 76  LFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD 135
           LFD MPERN+VS+  L+      G  E+A  ++ ++  EG    H  L ++ K   A +D
Sbjct: 106 LFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVA-MD 164

Query: 136 VEHGRRC--HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
              G  C  H    K+G D+N +V ++L+  Y+ CG   HA  VF+ +   + VT+TAM+
Sbjct: 165 AP-GLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMV 223

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL--GVCAREGCGVESDVFAQSDNKFS 251
           S  ++ D   +AL  F  M       +   L+SVL   VC                   S
Sbjct: 224 SCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVC------------------LS 265

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
             V G+ +H   +K   + + H+  +LLDMYAK G ++ A  +F  +P   V+ W+ +I+
Sbjct: 266 SAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLIS 325

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------------- 358
            Y Q YQ+ +A E+  RM      P+E +   +L AC     +  G+             
Sbjct: 326 RYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYES 385

Query: 359 ----------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                 E+F S+   +  SWN ++  Y QS   ++A+ +F+EM+
Sbjct: 386 ELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMR 445

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
              V   + T + +L +CA    ++   Q+H+   K+  + D  V + LI  Y+KC    
Sbjct: 446 AAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIR 505

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A +VF  I + D+V WN++I+G +L+    +A   F +M +++  P   +F  +LS C 
Sbjct: 506 DALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCG 565

Query: 517 KLSSSFQGRQVHAQIEKDGYVN---DIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTV 572
                 QG  +   +  D  +    D +  + ++ +  + G +  A +F  D+    + +
Sbjct: 566 STGLVNQGLSLFNSMTMDHRIKPSMDHY--TCIVRLLGRAGRLNDALKFIGDIPSTPSPM 623

Query: 573 TWNEMI 578
            W  ++
Sbjct: 624 VWRALL 629



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 208/449 (46%), Gaps = 82/449 (18%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA   + G   + F+ + LI+ YS C     A+ +FD +  KD  +W A++S  C S+ 
Sbjct: 172 IHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVS--CYSE- 228

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                                       N + E AL+ ++KM   G  P    L SV KA
Sbjct: 229 ----------------------------NDIPEDALNTFSKMRMAGAKPNPFVLTSVLKA 260

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
           +  L     G+  HG  +K   D   +V  ALL +YAKCG+ + A  VFE +   + + +
Sbjct: 261 AVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILW 320

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           + ++S  A++ +  +A EMF  M+R +V  +  SLS VL  CA           A  D  
Sbjct: 321 SFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACAN---------VAFLD-- 369

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 GQQ+H L IKLG+E++L + N+L+D+YAK  +M+++  IF +L + + VSWN +
Sbjct: 370 -----LGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTI 424

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------- 348
           I GY Q   +  A+ + Q M++      +VT  ++L AC                     
Sbjct: 425 IVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTF 484

Query: 349 --------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + G I+   ++F+S+    V SWNA++S Y+      +A++LF  
Sbjct: 485 NNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNR 544

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M     KP+  T   +LS C + G++  G
Sbjct: 545 MNKSDTKPNDVTFVALLSVCGSTGLVNQG 573



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 208/431 (48%), Gaps = 39/431 (9%)

Query: 41  SAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGL 100
           + + L D  PH       A+L    K   +E A  +F+ +P  +V+ W+ LIS   ++  
Sbjct: 277 AVKTLCDTEPHVG----GALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQ 332

Query: 101 EEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANA 160
            E+A  ++ +M     VP   +L+ V +A   +  ++ G++ H LVIK+G +  ++V NA
Sbjct: 333 NEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNA 392

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           L+ +YAKC   ++++ +F  + + NEV++  ++ G  ++    +AL +F+ M    V   
Sbjct: 393 LMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLST 452

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
            V+ SSVL  CA               N  S   H  Q+H L  K  F  D  + NSL+D
Sbjct: 453 QVTFSSVLRACA---------------NTASIK-HTVQIHSLIEKSTFNNDTIVCNSLID 496

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
            YAK G +  A  +F ++ +  VVSWN +I+GY    ++T A+EL  RM     +P++VT
Sbjct: 497 TYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVT 556

Query: 341 SINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
            + +L  C  +G +  G  +F+SM       PS+  +  ++    ++    +A+K   ++
Sbjct: 557 FVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDI 616

Query: 396 QFRGVKPDRTTLAIILSSC-----AAMGILESGKQVHAASLKTASHI---DNYVASGL-- 445
                 P       +LSSC      A+G   + K +        +++   + Y A+G+  
Sbjct: 617 P---STPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILD 673

Query: 446 -IGIYSKCQRN 455
            + +  K  RN
Sbjct: 674 QVALLRKSMRN 684



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 141/292 (48%), Gaps = 20/292 (6%)

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTA--SHIDNYVASGLIGIYSKCQRNELA 458
           K D    A +L  C A G   +G+ VHA  ++    + +D + A+ L+ +Y+K      A
Sbjct: 44  KLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAA 103

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            R+F  +PE ++V + +++ G +L     EA   F+++++       F   T+L     +
Sbjct: 104 RRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAM 163

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
            +      +HA   K G+  + FVGS+LI+ Y  CG +  AR  FD +  K+ VTW  M+
Sbjct: 164 DAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMV 223

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA--CSHSGLVDVGVEIFNSMQLDH 636
             Y++N   ++A+  +  M  +G KP+     ++L A  C  S ++  G+         H
Sbjct: 224 SCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGI---------H 274

Query: 637 G--VEPILDHYT----CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           G  V+ + D        ++D   + G+  +A  + + +P  DD ++W  L+S
Sbjct: 275 GCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIP-HDDVILWSFLIS 325


>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 642

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 327/607 (53%), Gaps = 38/607 (6%)

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
           L+I+  +  + +V N LL LY++ G T +A  VF+E+++PN   +T+++ G  +  +  E
Sbjct: 25  LLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDE 84

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           A  +F  M R+ +S+ + ++SSVL   AR                 +R   GQ V+   +
Sbjct: 85  AFSLFIQMRREPISVLNFTISSVLKALAR----------------LTRFKGGQAVYGFVL 128

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           K GF  DL + NS+LD++ +   +D+A   F  + E+ +VSWN+MI+GYG   +   A +
Sbjct: 129 KYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARK 188

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
              RM     E + V+  +M+   V++GD+   + +FDSMP   ++SWN M+S Y    +
Sbjct: 189 FFDRMP----ERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGD 244

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV-----HAASLKTASHIDN 439
              A  +F +M       D  +  I++S     G LES K       +   +     +D 
Sbjct: 245 CVNARIIFGKMPIH----DTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDG 300

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           Y+ +G             A  +F ++P  ++V W++MI G + N   ++A   F++ ++ 
Sbjct: 301 YIKNG---------DTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQ 351

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
           ++ P +     ++S+C++L        +         ++D+ V ++LI+MY KCG I  A
Sbjct: 352 DIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKA 411

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
            Q F+M H K+ + ++ MI   A +G G +A+ L+  M  + +KPD +TF+ +LTAC+H 
Sbjct: 412 LQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHG 471

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           GLVD G + F  M  + G++P   HY C++D LGR G   EA  LI  MP     V+W  
Sbjct: 472 GLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGA 531

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL++CR+H NV+LA+ AA ELF+++P NS  Y LL+NIY++ GRW  +  VR  + E+ +
Sbjct: 532 LLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRV 591

Query: 740 VKDPAYS 746
            K+   S
Sbjct: 592 RKNRGSS 598



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 239/477 (50%), Gaps = 28/477 (5%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +L    +    ++A+K+FDE+ + N   W +LI   V N   ++A S++ +M  E   
Sbjct: 39  NKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPIS 98

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
             + T++SV KA   L   + G+  +G V+K G   ++ V N++L L+ +C     A   
Sbjct: 99  VLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQA 158

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+EM E + V++  M+SG    DRV  A + F  M  + V    VS +S++    + G  
Sbjct: 159 FDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNV----VSWTSMICGYVKAGDM 214

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
            E+ V   S               + +K     DL   N ++  Y   GD  +A +IF  
Sbjct: 215 AEAQVLFDS---------------MPVK-----DLASWNVMVSGYMDIGDCVNARIIFGK 254

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +P     SWN+MI+G+ +  +   A +   RM +     + ++   ML   +++GD    
Sbjct: 255 MPIHDTGSWNIMISGFCKAGELESAKDFFDRMPN----KNVISWGIMLDGYIKNGDTNGA 310

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R +FD MP  ++ +W+ M+  Y+++    +A++LF   + + +KPD T +  I+S+C+ +
Sbjct: 311 RCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQL 370

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
           GI+++ + +    +  +   D  V + LI +Y+KC   E A ++F      D++C+++MI
Sbjct: 371 GIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMI 430

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           A L+ + L  +A   F +M++  + P   +F  VL++C       +GR+   Q+ ++
Sbjct: 431 AALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEE 487



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 189/437 (43%), Gaps = 47/437 (10%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ ++  +L+ G   D  + N +++L+ +C    +A+  FD+M  KDI SWN ++S   
Sbjct: 119 GGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYG 178

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF--------- 116
            +D ++ A K FD MPERNVVSW ++I   V+ G   +A  +++ M  +           
Sbjct: 179 NNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSG 238

Query: 117 -------VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLD-------KNIYVANALL 162
                  V   I    +    T   ++     C    ++   D       KN+     +L
Sbjct: 239 YMDIGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIML 298

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
             Y K G T  A  +F++M   N VT++ M+ G A+  + ++ALE+F     + +  D  
Sbjct: 299 DGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDET 358

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
            +  ++  C++ G          +      N  G  +          +DL +  SL+DMY
Sbjct: 359 FILGIISACSQLG-------IIDAAESIIHNYVGPSLL---------SDLRVFTSLIDMY 402

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           AK G ++ A  +F     + ++ ++ MIA          AI L  +M+    +PD VT +
Sbjct: 403 AKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFL 462

Query: 343 NMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
            +L AC   G +  GR+ F  M       PS   +  ++    +    +EA  L R M  
Sbjct: 463 GVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMP- 521

Query: 398 RGVKPDRTTLAIILSSC 414
             + P       +L++C
Sbjct: 522 --IAPHSVVWGALLAAC 536


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 205/714 (28%), Positives = 348/714 (48%), Gaps = 65/714 (9%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           M +R+  SWN  I+   RNG   +AL ++  M+ EG  P  ++  ++  A  +L D+  G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 140 RRCHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
              H  V +  GL  ++ VA A+L++Y +CG   HA   F+ M   N V+++AM++  A+
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
                +ALE+F  M  + V  ++++  SVL  CA                       G+ 
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACA----------------SMRAIALGKS 164

Query: 259 VHCLTIKLGFEA-DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           +H   +  G    D+ L N++++MY K G++D A  +F  +  ++ V+WN MIA   +  
Sbjct: 165 IHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHD 224

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------------------- 349
           +  +A  LL  M   G  P+++T ++++ AC                             
Sbjct: 225 RYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVAN 284

Query: 350 -------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                  + G ++  R   + + +    SW  +L++Y++  + K AI + + M   GVK 
Sbjct: 285 ALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKL 344

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  T   +L SC A+  L  G+++H    ++   +D  + + L+ +Y KC   + A R F
Sbjct: 345 DSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAF 404

Query: 463 HRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
            R+ ++ D+  WN+++A   L     E    F +M    + P   +F ++L +CA L++ 
Sbjct: 405 DRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAAL 464

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSA------LIEMYCKCGDIYGARQFF---DMMHGKNTV 572
             GR  H+++ + G  +   V SA      +I MY KCG +  A+  F         + V
Sbjct: 465 GLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVV 524

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
            W+ M+  Y+Q G  +EA+R +  M   GVKPD ++FV+ +  CSHSGLV   V  F S+
Sbjct: 525 AWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSL 584

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
           + DHG+ P   H+ C++D L RAG   EAE L+   P       W  LLS+CR + ++  
Sbjct: 585 RHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLER 644

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A+R A  L  L  ++ + YSLLA+++    +WDD+R  R+ + E   +  P  S
Sbjct: 645 ARRVAARLASL--RSGSAYSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCS 696



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 232/510 (45%), Gaps = 62/510 (12%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+    A+L+   +   +  A + FD M  RNVVSW+ +I+A  + G    AL ++ +M 
Sbjct: 76  DVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALELFVRMD 135

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWT 171
           +EG     IT  SV  A  ++  +  G+  H  ++  G L  ++ + N ++++Y KCG  
Sbjct: 136 HEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEV 195

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A  VFE M   N VT+  M++  ++ DR  EA  +   M    +  + ++L SV+  C
Sbjct: 196 DLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDAC 255

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A          + QS       V G+ VH +    G E+D  ++N+L+++Y K G + +A
Sbjct: 256 A----------WMQS------IVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAA 299

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-- 349
                 +  R  +SW  ++A Y +     +AI +++RM   G + D  T +N+L +CV  
Sbjct: 300 RHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAI 359

Query: 350 ---------------------------------RSGDIKTGREMFDSMPS-PSVSSWNAM 375
                                            + G+    R  FD M     V+ WNA+
Sbjct: 360 AALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNAL 419

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           L++Y   +  KE + +F  M  +GV PD  T   IL +CA++  L  G+  H+  L+   
Sbjct: 420 LAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGL 479

Query: 436 HIDNYVASG------LIGIYSKCQRNELAERVF---HRIPELDIVCWNSMIAGLSLNSLD 486
                VAS       +I +Y+KC     A+  F    R    D+V W++M+A  S   L 
Sbjct: 480 FDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLS 539

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            EA   F  M+Q  + P   SF + ++ C+
Sbjct: 540 EEALRCFYSMQQEGVKPDSVSFVSAIAGCS 569



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 203/466 (43%), Gaps = 93/466 (19%)

Query: 2   KAHVAGKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           +A   GK +H  I+ +GL  DD  L N ++ +Y KC                        
Sbjct: 157 RAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCG----------------------- 193

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
                   +++ A ++F+ M  +N V+WN +I+A  R+   ++A ++  +M  +G  P  
Sbjct: 194 --------EVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNK 245

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           ITL SV  A   +  +  GR  H +V   GL+ +  VANAL++LY KCG  + A    E 
Sbjct: 246 ITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEG 305

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           +   +++++T +++  A+      A+ + + M  + V +DS +  ++L  C         
Sbjct: 306 IETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCV-------- 357

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                     +    G+++H    + G E D  L  +L+DMY K G+ D+A   F  + +
Sbjct: 358 --------AIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSD 409

Query: 301 -RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG-- 357
            R V  WN ++A Y  + Q  + + +  RM   G  PD VT +++L AC     +  G  
Sbjct: 410 VRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRL 469

Query: 358 -------REMFDSMPSPS-----------------------------------VSSWNAM 375
                  R +FD     S                                   V +W+AM
Sbjct: 470 THSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAM 529

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           +++YSQ    +EA++ F  MQ  GVKPD  +    ++ C+  G++ 
Sbjct: 530 VAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVR 575



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 189/433 (43%), Gaps = 67/433 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+++H  +   GL  D  + N L+ LY KC    +A+H  + +  +D  SW       
Sbjct: 262 VRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISW------- 314

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     L++A  R+G  ++A++V  +M +EG      T  
Sbjct: 315 ------------------------TTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFV 350

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++ ++  A+  +  G   H  + + G++ +  +  AL+ +Y KCG    A   F+ MS+ 
Sbjct: 351 NLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDV 410

Query: 185 NEVT-FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            +VT + A+++     D+  E L +F  M  + V+ D+V+  S+L  CA           
Sbjct: 411 RDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACA----------- 459

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGF-------EADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                  +    G+  H   ++ G         ADL L+ S+++MYAK G +  A+  F+
Sbjct: 460 -----SLAALGLGRLTHSRMLERGLFDRQAVASADL-LTTSVINMYAKCGSLADAKAEFA 513

Query: 297 NLPE---RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
                    VV+W+ M+A Y Q   S +A+     M+  G +PD V+ ++ +  C  SG 
Sbjct: 514 KARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGL 573

Query: 354 IKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
           ++     F S+      +P+ + +  ++   S++   +EA  L R      +    +T  
Sbjct: 574 VREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAP---LGAHHSTWM 630

Query: 409 IILSSCAAMGILE 421
            +LS+C   G LE
Sbjct: 631 TLLSACRTYGDLE 643


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 210/655 (32%), Positives = 335/655 (51%), Gaps = 64/655 (9%)

Query: 136 VEHGRRCHGLVIKIGL-DKNIYVA-NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           +   +  HGLV+K    DK++ V  N    +Y+KC   + A  VF+EM + N  ++T M+
Sbjct: 80  IREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMI 139

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            G  +     +  + F  M+   +  D  + S+++  C     G++S             
Sbjct: 140 VGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCI----GLDSLEL---------- 185

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+ VH   +  GF   + +S SLL+MYAK G ++ +  +F+ + E + VSWN MI+G 
Sbjct: 186 --GKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGC 243

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSI-----------------------------NM 344
                  +A +L  RMK+    P+  T +                             N+
Sbjct: 244 TSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNV 303

Query: 345 LVACV------RSGDIKTGREMFDS--MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           LV         + G +   R +FD+  +     + WNAM+S YSQS   +EA++L+ +M 
Sbjct: 304 LVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMC 363

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA-----SHIDNYVASGLIGIYSK 451
             G+  D  T   + ++ AA   L+ G+ VH   LK         ++N +A      YSK
Sbjct: 364 QNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADA----YSK 419

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E   +VF R+ E DIV W +++   S +SL  EA   F  MR+    P QF+F++V
Sbjct: 420 CGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSV 479

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L SCA L     GRQVH  + K G   +  + SALI+MY KCG I  A + FD +   + 
Sbjct: 480 LISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDI 539

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           V+W  +I GYAQ+G  ++A++L++ M  SG+K + +T + +L ACSH G+V+ G+  F  
Sbjct: 540 VSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQ 599

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M+  +GV P ++HY C+ID LGR G   +A   I +MP + + ++W+ LL  CR+H NV 
Sbjct: 600 MEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVE 659

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L + AA ++  + P+ SA Y LL+N Y   G ++D  ++R +M +  + K+P YS
Sbjct: 660 LGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYS 714



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 166/619 (26%), Positives = 289/619 (46%), Gaps = 68/619 (10%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K  +   A  +FDEMP+RNV SW  +I     +GL       + +M N G +P     ++
Sbjct: 113 KCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSA 172

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           + ++   L  +E G+  H  ++  G   +I+V+ +LL++YAK G  + +  VF  M+E N
Sbjct: 173 IIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHN 232

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +V++ AM+SG       +EA ++F  M   A + +  +L SV                ++
Sbjct: 233 QVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSV----------------SK 276

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF-SNLPERSV- 303
           +  K      G++V     +LG E ++ +  +L+DMY+K G +  A  +F +N     V 
Sbjct: 277 AVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVN 336

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------ 357
             WN MI+GY Q   S +A+EL  +M   G   D  T  ++  A   S  ++ G      
Sbjct: 337 TPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGM 396

Query: 358 ------------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                         R++FD M    + SW  ++++YSQS   +E
Sbjct: 397 VLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEE 456

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+  F  M+  G  P++ T + +L SCA++  LE G+QVH    K     +  + S LI 
Sbjct: 457 ALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALID 516

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+KC     A +VF +I   DIV W ++I+G + + L  +A   F++M  + +     +
Sbjct: 517 MYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVT 576

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGY--VNDIFVGSALIEMYCKCGDIYGARQFFDM 565
              VL +C+      +G     Q+E DGY  V ++   + +I++  + G +  A +F   
Sbjct: 577 LLCVLFACSHGGMVEEGLFYFQQME-DGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRK 635

Query: 566 MHGK-NTVTWNEMIHGYAQNG---YGDEAVRLYKDMIASGVKPD-DITFVAILTACSHSG 620
           M  + N + W  ++ G   +G    G+ A R     I S ++P+   T+V +      +G
Sbjct: 636 MPMEPNEMVWQTLLGGCRVHGNVELGEIAAR----KILS-IRPEYSATYVLLSNTYIETG 690

Query: 621 LVDVGVEIFNSMQLDHGVE 639
             + G+ + N M+ D GV+
Sbjct: 691 SYEDGLSLRNVMK-DQGVK 708



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/515 (24%), Positives = 229/515 (44%), Gaps = 91/515 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++HA I+  G     F+   L+ +Y+K  +                            
Sbjct: 186 GKMVHAQIVMRGFATHIFVSTSLLNMYAKLGS---------------------------- 217

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E +Y +F+ M E N VSWN +IS    NGL  +A  ++ +M N    P   TL SV
Sbjct: 218 ---IEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSV 274

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE--MSEP 184
            KA   L+DV  G+       ++G++ N+ V  AL+ +Y+KCG    A  VF+   ++  
Sbjct: 275 SKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCG 334

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
               + AM+SG +++    EALE++  M +  ++ D  +  SV    A           A
Sbjct: 335 VNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIA-----------A 383

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFE-ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
               +F R VHG     + +K G +   + ++N++ D Y+K G ++    +F  + ER +
Sbjct: 384 SKSLQFGRVVHG-----MVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDI 438

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------- 348
           VSW  ++  Y Q     +A+     M+  GF P++ T  ++L++C               
Sbjct: 439 VSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGL 498

Query: 349 --------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + G I    ++FD + +P + SW A++S Y+Q    ++A
Sbjct: 499 LCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDA 558

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAASLKTASHIDNYVASGL 445
           ++LFR M+  G+K +  TL  +L +C+  G++E G    Q           +++Y    +
Sbjct: 559 LQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYAC--I 616

Query: 446 IGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           I +  +  R + A     ++P E + + W +++ G
Sbjct: 617 IDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 651



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 191/399 (47%), Gaps = 32/399 (8%)

Query: 312 GYGQKYQSTKAIELLQRMKSCG-------------------FEPDEVTSINMLVACVRS- 351
           G  + YQ T+  +L+  ++ C                    FE  ++  +    A V S 
Sbjct: 54  GISETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSK 113

Query: 352 -GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
             + +    +FD MP  +V SW  M+   ++     +  K F EM   G+ PD+   + I
Sbjct: 114 CSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAI 173

Query: 411 LSSCAAMGILESGKQVHAASLKT--ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
           + SC  +  LE GK VHA  +    A+HI  +V++ L+ +Y+K    E +  VF+ + E 
Sbjct: 174 IQSCIGLDSLELGKMVHAQIVMRGFATHI--FVSTSLLNMYAKLGSIEDSYWVFNMMTEH 231

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           + V WN+MI+G + N L +EAF  F +M+     P  ++  +V  +  KL     G++V 
Sbjct: 232 NQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQ 291

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH---GKNTVTWNEMIHGYAQNG 585
               + G   ++ VG+ALI+MY KCG ++ AR  FD      G NT  WN MI GY+Q+G
Sbjct: 292 NCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNT-PWNAMISGYSQSG 350

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE-PILDH 644
              EA+ LY  M  +G+  D  T+ ++  A + S  +  G  + + M L  G++  ++  
Sbjct: 351 CSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFG-RVVHGMVLKCGLDLMVVSV 409

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
              + D   + G   +   + D M  + D V W  L+++
Sbjct: 410 NNAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVTA 447



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 192/413 (46%), Gaps = 54/413 (13%)

Query: 18  GLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLF 77
           G+  +  +   LI++YSKC + H A+ +FD          N I    C  +         
Sbjct: 298 GIEGNVLVGTALIDMYSKCGSLHDARSVFDT---------NFI---NCGVN--------- 336

Query: 78  DEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVE 137
                     WN +IS   ++G  ++AL +Y +M   G      T  SVF A  A   ++
Sbjct: 337 --------TPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQ 388

Query: 138 HGRRCHGLVIKIGLDKNIY-VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
            GR  HG+V+K GLD  +  V NA+   Y+KCG+ +    VF+ M E + V++T +++  
Sbjct: 389 FGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAY 448

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           +++    EAL  F LM  +  + +  + SSVL  CA   C +E               +G
Sbjct: 449 SQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASL-CFLE---------------YG 492

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +QVH L  K G + +  + ++L+DMYAK G +  A  +F  +    +VSW  +I+GY Q 
Sbjct: 493 RQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQH 552

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSS 371
                A++L +RM+  G + + VT + +L AC   G ++ G   F  M       P +  
Sbjct: 553 GLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEH 612

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           +  ++    +     +A++  R+M    ++P+      +L  C   G +E G+
Sbjct: 613 YACIIDLLGRVGRLDDAMEFIRKMP---MEPNEMVWQTLLGGCRVHGNVELGE 662


>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 180/538 (33%), Positives = 289/538 (53%), Gaps = 92/538 (17%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           NSL+ +  K+G +D A  +F ++PE    SWN M++G+ Q  +  +++E   +M    F 
Sbjct: 85  NSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFL 144

Query: 336 PDEVTSINMLVACV-----------------------------------RSGDIKTGREM 360
            +E +  + L AC                                    + G +    E+
Sbjct: 145 LNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEV 204

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F  M   ++ +WN++++ Y Q+    EA+++F  M   G++PD  TLA ++S+CA++  L
Sbjct: 205 FSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCAL 264

Query: 421 ESGKQVHAASLKTASHIDNYV-ASGLIGIYSKCQRNELAERVFHRI-------------- 465
           + G Q+HA  +KT    D+ V  + L+ +Y+KC +   A RVF R+              
Sbjct: 265 KEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSG 324

Query: 466 -----------------PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
                             + ++V WN++IAG + N  + EA   F+ +++  ++PT ++F
Sbjct: 325 YARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTF 384

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
             +L S                        DIFVG++LI+MY KCG I    + F+ M  
Sbjct: 385 GNLLKS------------------------DIFVGNSLIDMYMKCGSIEDGSRVFEKMKE 420

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           ++ V+WN +I GYAQNGYG EA+++++ M+  G KPD +T + +L ACSH+GLV+ G   
Sbjct: 421 RDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHY 480

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F SM+ +HG+ P+ DHYTCM+D LGRAG  +EA+ LI+ MP   D V+W  LL++C++H 
Sbjct: 481 FFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 539

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           N+ + K AAE+L  +DP NS PY LL+N+Y+ LGRW D+  VR+LM +  + K P  S
Sbjct: 540 NIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCS 597



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 233/461 (50%), Gaps = 59/461 (12%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           +L+HA IL      + F+ NRLI++Y KC+    A+ LFD+MP ++ ++WN+++S   KS
Sbjct: 35  RLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKS 94

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
             L+ A +LF  MPE +  SWN+++S   ++   E++L  + KM  E F+    +  S  
Sbjct: 95  GFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSAL 154

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A   L+D+  G + H LV K     ++Y+ +AL+ +Y+KCG    A  VF  M E N V
Sbjct: 155 SACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLV 214

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           T+ ++++   +     EALE+F  M+   +  D V+L+SV+  CA   C ++        
Sbjct: 215 TWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACA-SLCALK-------- 265

Query: 248 NKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAK---------------------- 284
                   G Q+H   +K   F  DL L N+L+DMYAK                      
Sbjct: 266 -------EGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSE 318

Query: 285 ---------NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
                       + +A  +FS + +R+VVSWN +IAGY Q  ++ +A+ L + +K     
Sbjct: 319 TSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIW 378

Query: 336 PDEVTSINMLVACV-----------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
           P   T  N+L + +           + G I+ G  +F+ M      SWNA++  Y+Q+  
Sbjct: 379 PTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGY 438

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
             EA+++FR+M   G KPD  T+  +L +C+  G++E G+ 
Sbjct: 439 GAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRH 479



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 187/398 (46%), Gaps = 68/398 (17%)

Query: 251 SRNVHGQQ-VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
           SR+  G + VH   +   F  ++ + N L+D+Y K   +D A  +F  +P+R+  +WN +
Sbjct: 28  SRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSL 87

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSV 369
           I+                                      +SG +     +F SMP P  
Sbjct: 88  IS-----------------------------------VLTKSGFLDEAARLFGSMPEPDQ 112

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
            SWN+M+S ++Q +  +E+++ F +M       +  +    LS+CA +  L  G QVHA 
Sbjct: 113 CSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHAL 172

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
             K+    D Y+ S LI +YSKC     AE VF  + E ++V WNS+I     N    EA
Sbjct: 173 VSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEA 232

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK-DGYVNDIFVGSALIE 548
              F +M  + + P + + A+V+S+CA L +  +G Q+HA++ K + + +D+ +G+AL++
Sbjct: 233 LEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVD 292

Query: 549 MYCKCGDIYGARQFFDMMH-------------------------------GKNTVTWNEM 577
           MY KC  +  AR+ FD M                                 +N V+WN +
Sbjct: 293 MYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNAL 352

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           I GY QNG  +EA+RL++ +    + P   TF  +L +
Sbjct: 353 IAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKS 390



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 194/384 (50%), Gaps = 23/384 (5%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y  +A++    K   +  A ++F  M ERN+V+WN+LI+   +NG   +AL V+ +M 
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM 240

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWT 171
           + G  P  +TLASV  A  +L  ++ G + H  V+K      ++ + NAL+ +YAKC   
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A  VF+ MS  N V+ T+M+SG A+   V  A  MF  M ++ V    VS ++++   
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV----VSWNALIAGY 356

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG--FEADLHLSNSLLDMYAKNGDMD 289
            + G   E+        +  R +  + +       G   ++D+ + NSL+DMY K G ++
Sbjct: 357 TQNGENEEA-------LRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIE 409

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
               +F  + ER  VSWN +I GY Q     +A+++ ++M  CG +PD VT I +L AC 
Sbjct: 410 DGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACS 469

Query: 350 RSGDIKTGREMFDSMPS----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
            +G ++ GR  F SM      P    +  M+    ++    EA  L   M    V PD  
Sbjct: 470 HAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMP---VNPDAV 526

Query: 406 TLAIILSSCAAMGILESGKQVHAA 429
               +L++C   G +E GK  HAA
Sbjct: 527 VWGSLLAACKVHGNIEMGK--HAA 548



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 177/369 (47%), Gaps = 38/369 (10%)

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC--------- 452
           P+ +  A +L SC         + VHA  L T   ++ ++ + LI +Y KC         
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 453 -----QRNEL-----------------AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
                QRN                   A R+F  +PE D   WNSM++G + +    E+ 
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
            +F +M + +    ++SF + LS+CA L     G QVHA + K  Y  D+++GSALI+MY
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            KCG +  A + F  M  +N VTWN +I  Y QNG   EA+ ++  M+ SG++PD++T  
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
           ++++AC+    +  G++I   +   +     L     ++D   +    +EA  + D M  
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELF-RLDPKNSAPYSLLANIYSSLGRWDD-LR 728
           ++  V+ E  + S    A    + +AA  +F ++  +N   ++ L   Y+  G  ++ LR
Sbjct: 313 RN--VVSETSMVSGYARA---ASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALR 367

Query: 729 AVRELMSEN 737
             R L  E+
Sbjct: 368 LFRLLKRES 376


>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 741

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 218/725 (30%), Positives = 363/725 (50%), Gaps = 45/725 (6%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
            F  N  I    +      A  +F +M  ++I ++N+++SA  K+  +  A +LFD MP+
Sbjct: 15  VFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
           RN+VSWN++I+  + N L E A  ++++M    F     +   +    T + ++E  R  
Sbjct: 75  RNLVSWNSMIAGYLHNELVEDAARLFDRM----FKRDIYSWTLMITCYTRIGELEKAREL 130

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
             L+      ++    NAL++ YAK    + A  +F+EM   N V++ +++SG  K  ++
Sbjct: 131 FNLLPD---KQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKM 187

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
              L+ F  M  + V   ++ +   +GV   +   +           F + +    V   
Sbjct: 188 QLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWM-----------FFKKIPTPNVVSW 236

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
                         ++L  +A  G M  A  +F+ +P +++VSWN MI  Y ++ Q   A
Sbjct: 237 V-------------TMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDA 283

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
            +L   M     E D V+   M+   VR G +   RE+ + MP  ++++  AM++ Y QS
Sbjct: 284 YKLFMEMP----EKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQS 339

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               EA ++F ++  R    D      +++     G    G+   A  L       + V+
Sbjct: 340 GRMDEANEIFSQISVR----DSVCWNSMIT-----GYAHCGRTDEALRLFQEMVCKDMVS 390

Query: 443 -SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + +I  Y++  + + A  +F+ + E ++V WNS+I G   N L  EA   F  M+Q   
Sbjct: 391 WNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGE 450

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P Q +    L + A L++   G Q+H    K G+ ND+FV +A++ MY K G +  A  
Sbjct: 451 KPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAEN 510

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F  +  K+ V+WN +I GYA NG G EAV L++ M   G+ PD++TF  +L+AC+H G 
Sbjct: 511 VFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGF 570

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           VD G+ +F SM   + ++P  +HY C+I+ LGR G   EA  ++  M       IW  LL
Sbjct: 571 VDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALL 630

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
            +CR+H N+ LAK +AE L  L+P+N++ Y LL+N+++  GRWD +  VR LM EN   K
Sbjct: 631 WACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEK 690

Query: 742 DPAYS 746
            P  S
Sbjct: 691 QPGCS 695



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 250/519 (48%), Gaps = 45/519 (8%)

Query: 5   VAGKLLHAHILRNG--LFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHK-DIYS 56
           +AG  LH  ++ +   LFD     D +    +I  Y++      A+ LF+ +P K D   
Sbjct: 84  IAG-YLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVC 142

Query: 57  WNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
            NA+++   K      A KLFDEM  +NVVSWN+++S   +NG  +  L  +  M     
Sbjct: 143 RNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNV 202

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           V  ++ +         + D++       +  K     N+     +LS +A  G    A  
Sbjct: 203 VSWNLMV----DGYVGVGDLDSA----WMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARN 254

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F EM   N V++ AM+    + +++ +A ++F  M  K    DSVS ++++    R G 
Sbjct: 255 LFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEK----DSVSWTAMINGYVRVG- 309

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                          + +  +++    + L    ++    ++++ Y ++G MD A  IFS
Sbjct: 310 ---------------KLLQAREI----LNLMPYKNIAAQTAMINGYLQSGRMDEANEIFS 350

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            +  R  V WN MI GY    ++ +A+ L Q M  C    D V+   M+ A  ++G +  
Sbjct: 351 QISVRDSVCWNSMITGYAHCGRTDEALRLFQEM-VC---KDMVSWNTMIAAYAQAGQMDK 406

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
             EMF+ M   +V SWN++++ Y Q+  + EA+  F  M+ +G KPD+TT+   L + A 
Sbjct: 407 ALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASAN 466

Query: 417 MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
           +  L  G Q+H  ++KT    D +V + ++ +Y+K  R   AE VF  I   D+V WNS+
Sbjct: 467 LAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSL 526

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
           IAG +LN    EA   F+ M    + P + +F  +LS+C
Sbjct: 527 IAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSAC 565



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 133/247 (53%), Gaps = 1/247 (0%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           D+   N +I  Y+ C  T  A  LF +M  KD+ SWN +++A  ++  ++ A ++F+EM 
Sbjct: 356 DSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQ 415

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
           ERNVVSWN+LI+  V+NGL  +AL+ +  M  +G  P   T+    +AS  L  +  G +
Sbjct: 416 ERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQ 475

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
            H L IK G   +++V NA+L++YAK G    A  VF E+   + V++ ++++G A    
Sbjct: 476 LHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGC 535

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDNKFSRNVHGQQVH 260
             EA+E+F +M  + +  D V+ + +L  C   G   +  ++F      +S     +   
Sbjct: 536 GKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYA 595

Query: 261 CLTIKLG 267
           C+   LG
Sbjct: 596 CVINLLG 602



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 62/110 (56%), Gaps = 4/110 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH   ++ G  +D F+ N ++ +Y+K      A+++F ++ +KD+ SWN++++    
Sbjct: 473 GVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYAL 532

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMS 112
           +   + A +LF+ MP R +    V++  L+SA    G  ++ L+++  M+
Sbjct: 533 NGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMT 582


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 189/510 (37%), Positives = 285/510 (55%), Gaps = 39/510 (7%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK----- 330
           N+L++ YAK+  +  A  +F  +P+  +VS+N +IA Y  + +    + L + ++     
Sbjct: 79  NTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLG 138

Query: 331 -----------SCGFEPDEVTSI----------------NMLVACV-RSGDIKTGREMFD 362
                      +CG +   V  +                N ++AC  R G +   R +F 
Sbjct: 139 LDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFR 198

Query: 363 SMPSPSVS---SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
            M         SWNAM+ +  Q     EA+ LFREM  RG+K D  T+A +L++   +  
Sbjct: 199 EMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKD 258

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL-AERVFHRIPELDIVCWNSMIA 478
           L  G+Q H   +K+  H +++V SGLI +YSKC  + +   +VF  I   D+V WN+MI+
Sbjct: 259 LVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMIS 318

Query: 479 GLSL-NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA-QIEKDGY 536
           G SL   L  +    F++M++N   P   SF  V S+C+ LSS   G+QVHA  I+ D  
Sbjct: 319 GFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVP 378

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
            N + V +AL+ MY KCG+++ AR+ FD M   NTV+ N MI GYAQ+G   E++RL++ 
Sbjct: 379 YNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFEL 438

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M+   + P+ ITF+A+L+AC H+G V+ G + FN M+    +EP  +HY+CMID LGRAG
Sbjct: 439 MLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAG 498

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              EAE +I+ MP     + W  LL +CR H NV LA +AA E  RL+P N+APY +L+N
Sbjct: 499 KLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSN 558

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +Y+S  RW++   V+ LM E  + K P  S
Sbjct: 559 MYASAARWEEAATVKRLMRERGVKKKPGCS 588



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 239/509 (46%), Gaps = 70/509 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GK+LHA   ++ +   T+L N    LYSKC + H+AQ  F    + +++S+N +++A 
Sbjct: 26  ITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYPNVFSYNTLINAY 85

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            K   +  A ++FDE+P+ ++VS+N LI+A    G     L ++ ++          TL+
Sbjct: 86  AKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLS 145

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            V  A     DV   R+ H  V+  G D    V NA+L+ Y++ G+   A  VF EM E 
Sbjct: 146 GVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEG 203

Query: 185 ---NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG--VCAREGCGVE 239
              +EV++ AM+    +    +EA+ +FR M+R+ + +D  +++SVL    C ++  G  
Sbjct: 204 GGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVG-- 261

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK-NGDMDSAEVIFSNL 298
                           G+Q H + IK GF  + H+ + L+D+Y+K  G M     +F  +
Sbjct: 262 ----------------GRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEI 305

Query: 299 PERSVVSWNVMIAGYGQKYQ--STKAIELLQRMKSCGFEPDEVTSINMLVAC-------- 348
               +V WN MI+G+   Y+  S   +   + M+  GF PD+ + + +  AC        
Sbjct: 306 TAPDLVLWNTMISGFSL-YEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSL 364

Query: 349 ----------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                                        + G++   R +FD+MP  +  S N+M++ Y+
Sbjct: 365 GKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYA 424

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---VHAASLKTASHI 437
           Q     E+++LF  M  + + P+  T   +LS+C   G +E G++   +           
Sbjct: 425 QHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEA 484

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIP 466
           ++Y  S +I +  +  + + AER+   +P
Sbjct: 485 EHY--SCMIDLLGRAGKLKEAERIIETMP 511



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 141/586 (24%), Positives = 244/586 (41%), Gaps = 133/586 (22%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG------------ 169
           T  ++ KA  A  D+  G+  H L  K  +  + Y++N    LY+KCG            
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 170 --------------WTKHAV-----PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
                         + KH++      VF+E+ +P+ V++  +++  A        L +F 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            +    + +D  +LS V+  C               D    R     Q+HC  +  G + 
Sbjct: 131 EVRELRLGLDGFTLSGVITACG-------------DDVGLVR-----QLHCFVVVCGHDC 172

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPE---RSVVSWNVMIAGYGQKYQSTKAIELLQ 327
              ++N++L  Y++ G +  A  +F  + E   R  VSWN MI   GQ  +  +A+ L +
Sbjct: 173 YASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFR 232

Query: 328 RMKSCGFEPDEVTSINMLVA--CVR----------------------------------S 351
            M   G + D  T  ++L A  CV+                                  +
Sbjct: 233 EMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCA 292

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE-AIKLFREMQFRGVKPDRTTLAII 410
           G +   R++F+ + +P +  WN M+S +S  E+  E  +  FREMQ  G +PD  +   +
Sbjct: 293 GSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCV 352

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELD 469
            S+C+ +     GKQVHA ++K+    +   V + L+ +YSKC     A RVF  +PE +
Sbjct: 353 TSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHN 412

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
            V  NSMIAG + + +++E+   F+ M + ++ P   +F  VLS+C           VH 
Sbjct: 413 TVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSAC-----------VHT 461

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT-----WNEMIHGYAQN 584
                                   G +   +++F+MM  +  +      ++ MI    + 
Sbjct: 462 ------------------------GKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRA 497

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           G   EA R+ + M      P  I +  +L AC   G V++ V+  N
Sbjct: 498 GKLKEAERIIETM---PFNPGSIEWATLLGACRKHGNVELAVKAAN 540



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 189/393 (48%), Gaps = 36/393 (9%)

Query: 44  HLFDKMPHKDIYSW--NAILSAQCKSDDLEFAYKLFDEMPE---RNVVSWNNLISALV-- 96
           H F  +   D Y+   NA+L+   +   L  A ++F EM E   R+ VSWN +I A    
Sbjct: 162 HCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQH 221

Query: 97  RNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIY 156
           R G+E  A+ ++ +M   G      T+ASV  A T + D+  GR+ HG++IK G   N +
Sbjct: 222 REGME--AVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSH 279

Query: 157 VANALLSLYAKC-GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE-ALEMFRLMIR 214
           V + L+ LY+KC G       VFEE++ P+ V +  M+SG +  + + E  L  FR M R
Sbjct: 280 VGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQR 339

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD-LH 273
                D  S   V   C+                  S    G+QVH L IK     + + 
Sbjct: 340 NGFRPDDCSFVCVTSACS----------------NLSSPSLGKQVHALAIKSDVPYNRVS 383

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           ++N+L+ MY+K G++  A  +F  +PE + VS N MIAGY Q     +++ L + M    
Sbjct: 384 VNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKD 443

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEA 388
             P+ +T I +L ACV +G ++ G++ F+ M       P    ++ M+    ++   KEA
Sbjct: 444 IAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEA 503

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
            ++   M F    P     A +L +C   G +E
Sbjct: 504 ERIIETMPF---NPGSIEWATLLGACRKHGNVE 533



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 143/321 (44%), Gaps = 41/321 (12%)

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC------------- 452
           T   +L +C A   L +GK +HA   K+      Y+++    +YSKC             
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 453 ------QRNEL------------AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
                   N L            A RVF  IP+ DIV +N++IA  +           F+
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           ++R+  +    F+ + V+++C         RQ+H  +   G+     V +A++  Y + G
Sbjct: 131 EVRELRLGLDGFTLSGVITACGDDVGLV--RQLHCFVVVCGHDCYASVNNAVLACYSRKG 188

Query: 555 DIYGARQFFDMM---HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
            +  AR+ F  M    G++ V+WN MI    Q+  G EAV L+++M+  G+K D  T  +
Sbjct: 189 FLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMAS 248

Query: 612 ILTACSHSGLVD-VGVEIFNSMQLDHGVEPILDHYTCMIDCLGR-AGHFHEAEMLIDEMP 669
           +LTA   + + D VG   F+ M +  G        + +ID   + AG   E   + +E+ 
Sbjct: 249 VLTA--FTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEIT 306

Query: 670 CKDDPVIWEVLLSSCRLHANV 690
              D V+W  ++S   L+ ++
Sbjct: 307 -APDLVLWNTMISGFSLYEDL 326



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 17/211 (8%)

Query: 16  RNGLFDD--TFLCNRLIELYSKCNNTHS--------AQHLFDKMPHKDIYSWNAILSAQC 65
           RNG   D  +F+C     + S C+N  S        A  +   +P+  +   NA+++   
Sbjct: 339 RNGFRPDDCSFVC-----VTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYS 393

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K  ++  A ++FD MPE N VS N++I+   ++G+E ++L ++  M  +   P  IT  +
Sbjct: 394 KCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIA 453

Query: 126 VFKASTALLDVEHGRRCHGLVI-KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-E 183
           V  A      VE G++   ++  +  ++      + ++ L  + G  K A  + E M   
Sbjct: 454 VLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFN 513

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
           P  + +  ++    K   V  A++     +R
Sbjct: 514 PGSIEWATLLGACRKHGNVELAVKAANEFLR 544



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 82/221 (37%), Gaps = 39/221 (17%)

Query: 502 YPTQF-SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG-- 558
           YP Q  +F  +L +C        G+ +HA   K       ++ +    +Y KCG ++   
Sbjct: 5   YPLQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQ 64

Query: 559 -----------------------------ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
                                        AR+ FD +   + V++N +I  YA  G    
Sbjct: 65  TSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGP 124

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG-VEIFNSMQLDHGVEPILDHYTCM 648
            +RL++++    +  D  T   ++TAC      DVG V   +   +  G +        +
Sbjct: 125 TLRLFEEVRELRLGLDGFTLSGVITACGD----DVGLVRQLHCFVVVCGHDCYASVNNAV 180

Query: 649 IDCLGRAGHFHEAEMLIDEM--PCKDDPVIWEVLLSSCRLH 687
           + C  R G   EA  +  EM      D V W  ++ +C  H
Sbjct: 181 LACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQH 221


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 203/699 (29%), Positives = 352/699 (50%), Gaps = 60/699 (8%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S+N +I+     G   + L+ Y  M          T  S+ KA ++L     G   H  +
Sbjct: 36  SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +  GL  + Y+A++L++ YAK G+   A  VF+ M E N V +T+++   ++T RV EA 
Sbjct: 96  LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155

Query: 207 EMFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
            +F  M R+ +   SV++ S+L GV                    S   H Q +H   I 
Sbjct: 156 SLFDEMRRQGIQPSSVTMLSLLFGV--------------------SELAHVQCLHGSAIL 195

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
            GF +D++LSNS+L MY K  +++ +  +F  + +R +VSWN +++ Y Q     + + L
Sbjct: 196 YGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLL 255

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--------------------------- 358
           L+ M+  GFEPD  T  ++L      G++K GR                           
Sbjct: 256 LKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLK 315

Query: 359 --------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
                    MF+      V  W AM+S   Q+ +  +A+ +FR+M   GVK    T+A +
Sbjct: 316 GGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASV 375

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           +++CA +G    G  VH    +    +D    + L+ +++KC   + +  VF ++ + ++
Sbjct: 376 ITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNL 435

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           V WN+MI G + N    +A   F +MR +   P   +  ++L  CA       G+ +H+ 
Sbjct: 436 VSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSF 495

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + ++G    I V ++L++MYCKCGD+  A++ F+ M   + V+W+ +I GY  +G G+ A
Sbjct: 496 VIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETA 555

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           +R Y   + SG+KP+ + F+++L++CSH+GLV+ G+ I+ SM  D G+ P L+H+ C++D
Sbjct: 556 LRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVD 615

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPV--IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
            L RAG   EA  L  +     DPV  +  ++L +CR + N  L    A ++  L P ++
Sbjct: 616 LLSRAGRVEEAYNLYKKK--FSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMDA 673

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
             +  LA+ Y+S+ +W+++      M    + K P +S 
Sbjct: 674 GNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSF 712



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 153/593 (25%), Positives = 272/593 (45%), Gaps = 86/593 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH  IL +GL  D ++ + LI  Y+K                               
Sbjct: 88  GLSLHQRILVSGLSLDAYIASSLINFYAKFGFA--------------------------- 120

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               + A K+FD MPERNVV W ++I    R G   +A S++++M  +G  P+ +T+ S+
Sbjct: 121 ----DVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSL 176

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               + L    H +  HG  I  G   +I ++N++LS+Y KC   +++  +F+ M + + 
Sbjct: 177 LFGVSEL---AHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDL 233

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +++S  A+   + E L + + M  +    D  +  SVL V A  G           
Sbjct: 234 VSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRG----------- 282

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           + K  R +HGQ      ++  F+ D H+  SL+ MY K G++D A  +F    ++ VV W
Sbjct: 283 ELKLGRCLHGQ-----ILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLW 337

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG-------------- 352
             MI+G  Q   + KA+ + ++M   G +    T  +++ AC + G              
Sbjct: 338 TAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFR 397

Query: 353 -----DIKTGREM----------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                DI T   +                FD M   ++ SWNAM++ Y+Q+    +A+ L
Sbjct: 398 HELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFL 457

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F EM+     PD  T+  +L  CA+ G L  GK +H+  ++        V + L+ +Y K
Sbjct: 458 FNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCK 517

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   ++A+R F+++P  D+V W+++I G   +     A  F+ +  ++ M P    F +V
Sbjct: 518 CGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSV 577

Query: 512 LSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF 563
           LSSC+      QG  ++  + +D G   ++   + ++++  + G +  A   +
Sbjct: 578 LSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLY 630



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 225/460 (48%), Gaps = 59/460 (12%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           DI   N++LS   K  ++E++ KLFD M +R++VSWN+L+SA  + G   + L +   M 
Sbjct: 201 DINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMR 260

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            +GF P   T  SV   + +  +++ GR  HG +++   D + +V  +L+ +Y K G   
Sbjct: 261 IQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNID 320

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +FE   + + V +TAM+SGL +     +AL +FR M++  V   + +++SV+  CA
Sbjct: 321 IAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACA 380

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
           + G               S N+ G  VH    +     D+   NSL+ M+AK G +D + 
Sbjct: 381 QLG---------------SYNL-GTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSS 424

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
           ++F  + +R++VSWN MI GY Q     KA+ L   M+S    PD +T +++L  C  +G
Sbjct: 425 IVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTG 484

Query: 353 DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
            +  G+ +                                   F+ MPS  + SW+A++ 
Sbjct: 485 QLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIV 544

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK---TA 434
            Y      + A++ + +    G+KP+      +LSSC+  G++E G  ++ +  +    A
Sbjct: 545 GYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIA 604

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRI---PELDIV 471
            +++++    ++ + S+  R E A  ++ +    P LD++
Sbjct: 605 PNLEHHAC--VVDLLSRAGRVEEAYNLYKKKFSDPVLDVL 642



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 176/357 (49%), Gaps = 20/357 (5%)

Query: 363 SMPSPS-----VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           S+P PS     ++S+NA+++ +S    H++ +  +  M    V  D  T   +L +C+++
Sbjct: 23  SLPHPSSASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSL 82

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
            +   G  +H   L +   +D Y+AS LI  Y+K    ++A +VF  +PE ++V W S+I
Sbjct: 83  NLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSII 142

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
              S      EAF  F +MR+  + P+  +  ++L   ++L+     + +H      G++
Sbjct: 143 GCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELA---HVQCLHGSAILYGFM 199

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           +DI + ++++ MY KC +I  +R+ FD M  ++ V+WN ++  YAQ GY  E + L K M
Sbjct: 200 SDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTM 259

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGV----EIFNS-MQLDHGVEPILDHYTCMIDCL 652
              G +PD  TF ++L+  +  G + +G     +I  +   LD  VE      T +I   
Sbjct: 260 RIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVE------TSLIVMY 313

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
            + G+   A  +  E     D V+W  ++S    + +   A     ++ +   K+S 
Sbjct: 314 LKGGNIDIAFRMF-ERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSST 369


>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Glycine max]
          Length = 714

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 204/672 (30%), Positives = 335/672 (49%), Gaps = 60/672 (8%)

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKA------------STALLDVEHGRRCHGLVIKIGL 151
           AL ++ ++      P H+T + + KA             TA L V    +    ++K G+
Sbjct: 18  ALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQV---NQIQTQLLKRGI 74

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D+ +YV  AL+  Y K G+T HA  +FE++   + V++  ++ G ++     +AL++F  
Sbjct: 75  DQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVH 134

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M+R++   +  +++S+L  C R       ++F Q          G+ VH   IK G   D
Sbjct: 135 MLRESFRPNQTTIASLLPSCGRR------ELFLQ----------GRSVHAFGIKAGLGLD 178

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
             LSN+L  MYAK  D+++++++F  + E++V+SWN MI  YGQ     KA+   + M  
Sbjct: 179 PQLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLK 238

Query: 332 CGFEPDEVTSINML-------------VACVRSGDIKT----------------GREMFD 362
            G++P  VT +N++             + C  +GD                    + +++
Sbjct: 239 EGWQPSPVTMMNLMSANAVPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYE 298

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
             P+  + S   ++SSYS+    + A++ F +     +KPD   L  +L   +       
Sbjct: 299 CYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAI 358

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           G   H   LK     D  VA+GLI  YS+      A  +F    E  ++ WNSMI+G   
Sbjct: 359 GCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQ 418

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
                +A   F QM      P   + A++LS C +L     G  +H  I ++    + F 
Sbjct: 419 AGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFT 478

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
           G+ALI+MY KCG +  A + F  ++    VTWN +I GY+  G   +A   +  +   G+
Sbjct: 479 GTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGL 538

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
           +PD ITF+ +L AC+H GLV  G+E F  M+ ++G+ P L HY C++  LGRAG F EA 
Sbjct: 539 EPDKITFLGVLAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAI 598

Query: 663 MLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
            +I+ M  + D  +W  LLS+C +   V+L +  A+ LF L+ KN   Y  L+N+Y+ +G
Sbjct: 599 EIINNMEIRPDSAVWGALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYVSLSNLYAIVG 658

Query: 723 RWDDLRAVRELM 734
           RWDD+  VR++M
Sbjct: 659 RWDDVARVRDMM 670



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 236/498 (47%), Gaps = 59/498 (11%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A +LF+++P  +VVSWN LI    ++G    AL ++  M  E F P   T+AS+  +   
Sbjct: 97  ARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHMLRESFRPNQTTIASLLPSCGR 156

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
                 GR  H   IK GL  +  ++NAL S+YAKC   + +  +F+EM E N +++  M
Sbjct: 157 RELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTM 216

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           +    +     +A+  F+ M+++      V++                       N  S 
Sbjct: 217 IGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMM----------------------NLMSA 254

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
           N   + VHC  IK GF  D  +  SL+ +YAK G  D A++++   P + ++S   +I+ 
Sbjct: 255 NAVPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGIISS 314

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINML----------VACVRSG-DIKTGRE-- 359
           Y +K +   A+E   +      +PD V  I++L          + C   G  +K G    
Sbjct: 315 YSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTND 374

Query: 360 -----------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                   FD    P + +WN+M+S   Q+    +A++LF +M 
Sbjct: 375 CLVANGLISFYSRFDEILAALSLFFDRSEKPLI-TWNSMISGCVQAGKSSDAMELFCQMN 433

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
             G KPD  T+A +LS C  +G L  G+ +H   L+    ++++  + LI +Y+KC R +
Sbjct: 434 MCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLD 493

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            AE++F+ I +  +V WNS+I+G SL  L+ +AF  F ++++  + P + +F  VL++C 
Sbjct: 494 YAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACT 553

Query: 517 KLSSSFQGRQVHAQIEKD 534
                + G +    + K+
Sbjct: 554 HGGLVYAGMEYFRIMRKE 571



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 197/403 (48%), Gaps = 57/403 (14%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA+ S   K DDLE +  LF EM E+NV+SWN +I A  +NG E+KA+  + +M  EG+ 
Sbjct: 183 NALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQ 242

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P+ +T+ ++  A+     V      H  +IK G   +  V  +L+ LYAK G+T  A  +
Sbjct: 243 PSPVTMMNLMSANAVPETV------HCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLL 296

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           +E     + ++ T ++S  ++   V  A+E F   ++  +  D+V+L SVL        G
Sbjct: 297 YECYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLH-------G 349

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           +            S    G   H   +K G   D  ++N L+  Y++  ++ +A  +F +
Sbjct: 350 ISDP---------SHFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFD 400

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
             E+ +++WN MI+G  Q  +S+ A+EL  +M  CG +PD +T  ++L  C + G ++ G
Sbjct: 401 RSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIG 460

Query: 358 -----------------------------------REMFDSMPSPSVSSWNAMLSSYSQS 382
                                               ++F S+  P + +WN+++S YS  
Sbjct: 461 ETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLY 520

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
               +A   F ++Q +G++PD+ T   +L++C   G++ +G +
Sbjct: 521 GLEHKAFGCFSKLQEQGLEPDKITFLGVLAACTHGGLVYAGME 563



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 32/234 (13%)

Query: 3   AHVA-GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +H A G   H + L+NGL +D  + N LI  YS+ +   +A  LF     K + +WN+  
Sbjct: 354 SHFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNS-- 411

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                        +IS  V+ G    A+ ++ +M+  G  P  I
Sbjct: 412 -----------------------------MISGCVQAGKSSDAMELFCQMNMCGQKPDAI 442

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+AS+      L  +  G   HG +++  +    +   AL+ +Y KCG   +A  +F  +
Sbjct: 443 TIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSI 502

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           ++P  VT+ +++SG +      +A   F  +  + +  D ++   VL  C   G
Sbjct: 503 NDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACTHGG 556



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 35/231 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH +ILRN +  + F    LI++Y+KC                              
Sbjct: 460 GETLHGYILRNNVKVEDFTGTALIDMYTKCGR---------------------------- 491

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L++A K+F  + +  +V+WN++IS     GLE KA   ++K+  +G  P  IT   V
Sbjct: 492 ---LDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGV 548

Query: 127 FKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EP 184
             A T    V  G     ++ K  GL   +     ++ L  + G  K A+ +   M   P
Sbjct: 549 LAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINNMEIRP 608

Query: 185 NEVTFTAMMSG--LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           +   + A++S   + +  ++ E L     ++        VSLS++  +  R
Sbjct: 609 DSAVWGALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYVSLSNLYAIVGR 659


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 186/613 (30%), Positives = 317/613 (51%), Gaps = 55/613 (8%)

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLG 229
           T+HA  +F  + +P+   F  ++ G +  D    ++ ++  + R   +S D+ + +  + 
Sbjct: 60  TRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVA 119

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            C                   S + H   +H  +I  G+ +++ + ++L+D+Y K   + 
Sbjct: 120 AC-------------------SNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVV 160

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT--------- 340
            A  +F  +PER  V WN MI G  +      +I+L + M + G   D  T         
Sbjct: 161 YARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAA 220

Query: 341 -----SINMLVACV---------------------RSGDIKTGREMFDSMPSPSVSSWNA 374
                 + M + C+                     + GD+ T R +F  +  P + ++NA
Sbjct: 221 ELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNA 280

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+S ++ +   + ++KLFRE+ F G +   +T+  ++   +  G L     +H   +K+ 
Sbjct: 281 MISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSG 340

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             ++  V++    IY+K    +LA  +F   PE  +V WN+MI+G + N     A   FK
Sbjct: 341 IILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFK 400

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           +M + E  P   +  T+LS+CA+L S   G+ VH  I+ +    +I+V +AL++MY KCG
Sbjct: 401 EMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCG 460

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
           +I  A Q FD M  KNTVTWN MI GY  +GYG EA++LY +M+  G  P  +TF+++L 
Sbjct: 461 NISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLY 520

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           ACSH+GLV  G EIF++M   + +EP+++HY CM+D LGR+G   +A   I +MP +  P
Sbjct: 521 ACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGP 580

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
            +W  LL +C +H +  +A+ A+E LF LDP +   Y LL+NIYS    +    ++R+++
Sbjct: 581 AVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVV 640

Query: 735 SENCIVKDPAYSL 747
            +  + K P  +L
Sbjct: 641 KKRKLAKSPGCTL 653



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 200/453 (44%), Gaps = 82/453 (18%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           LLHAH + +G   + F+ + L++LY                               CK  
Sbjct: 129 LLHAHSIIDGYGSNVFVGSALVDLY-------------------------------CKFS 157

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
            + +A K+FD MPER+ V WN +I+ LV+N   + ++ ++ +M  +G      T+ +V  
Sbjct: 158 RVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLP 217

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           A+  L +++ G     L +KIG     YV   L+SLY+KCG    A  +F  ++ P+ + 
Sbjct: 218 AAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIA 277

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           + AM+SG         ++++FR ++    S + VS S+++G+                 +
Sbjct: 278 YNAMISGFTANGGTECSVKLFRELL---FSGERVSSSTIVGLIPLH-------------S 321

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
            F        +H   +K G   +  +S +   +Y K  ++D A  +F   PE++VV+WN 
Sbjct: 322 PFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNA 381

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------- 358
           MI+GY Q   +  AI L + M    F P+ VT   +L AC + G +  G+          
Sbjct: 382 MISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSEN 441

Query: 359 -------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                    ++FDSM   +  +WN M+  Y       EA+KL+ 
Sbjct: 442 LEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYN 501

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           EM   G  P   T   +L +C+  G++  G+++
Sbjct: 502 EMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEI 534



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 1/208 (0%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K ++++ A  LFDE PE+ VV+WN +IS   +NG  E A+S++ +M    F P  +T+ +
Sbjct: 357 KLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITT 416

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A   L  +  G+  H L+    L+ NIYV+ AL+ +YAKCG    A  +F+ MSE N
Sbjct: 417 ILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKN 476

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFA 244
            VT+  M+ G        EAL+++  M+    +  +V+  SVL  C+  G  G   ++F 
Sbjct: 477 TVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFH 536

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADL 272
              NK+      +   C+   LG    L
Sbjct: 537 NMVNKYRIEPLIEHYACMVDILGRSGQL 564



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 2/143 (1%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           +IY   A++    K  ++  A++LFD M E+N V+WN +I     +G   +AL +YN+M 
Sbjct: 445 NIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEML 504

Query: 113 NEGFVPTHITLASVFKA-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
           + G+ P+ +T  SV  A S A L  E     H +V K  ++  I     ++ +  + G  
Sbjct: 505 HLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQL 564

Query: 172 KHAVPVFEEMS-EPNEVTFTAMM 193
           + A+   ++M  EP    +  ++
Sbjct: 565 EKALEFIKKMPVEPGPAVWGTLL 587


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 186/560 (33%), Positives = 298/560 (53%), Gaps = 70/560 (12%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYA--KNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           +Q+H  TIK+G  +D      ++      ++G M  A  +F  +P+ ++  WN MI GY 
Sbjct: 24  KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYS 83

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG----------------- 357
           +       + +   M +   +PD  T   +L    R+  ++ G                 
Sbjct: 84  RINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLF 143

Query: 358 ------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                             R++FD   +  V +WN MLS Y++ +  K++  LF EM+ RG
Sbjct: 144 VQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRG 203

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAAS---------LKTASHIDNYVASG------ 444
           V P+  TL ++LS+C+ +  LE GK ++            +     ID + A G      
Sbjct: 204 VSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQ 263

Query: 445 ----------------LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG-LSLNSLDI 487
                           ++  ++   + +LA + F +IPE D V W +MI G L +N   I
Sbjct: 264 SVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRF-I 322

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           EA   F++M+ + + P +F+  ++L++CA L +   G  V   I+K+   ND FVG+ALI
Sbjct: 323 EALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALI 382

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
           +MY KCG++  A++ F  MH K+  TW  MI G A NG+G+EA+ ++ +MI + + PD+I
Sbjct: 383 DMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEI 442

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           T++ +L AC+H+G+V+ G   F SM + HG++P + HY CM+D LGRAG   EA  +I  
Sbjct: 443 TYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVN 502

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
           MP K + ++W  LL +CR+H NV+LA+ AA+++  L+P+N A Y LL NIY++  RW++L
Sbjct: 503 MPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENL 562

Query: 728 RAVRELMSENCIVKDPAYSL 747
           R VR+LM E  I K P  SL
Sbjct: 563 RQVRKLMMERGIKKTPGCSL 582



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 192/402 (47%), Gaps = 28/402 (6%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK ++ +I    +  +  L N LI++++ C     AQ +FD M ++D+ SW +I++   
Sbjct: 226 GGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFA 285

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               ++ A K FD++PER+ VSW  +I   +R     +AL+++ +M      P   T+ S
Sbjct: 286 NIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVS 345

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A   L  +E G      + K  +  + +V NAL+ +Y KCG    A  VF+EM   +
Sbjct: 346 ILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKD 405

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           + T+TAM+ GLA      EAL MF  MI  +++ D ++   VL  C   G   +   F  
Sbjct: 406 KFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFI 465

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER-SVV 304
           S               +T++ G + ++     ++D+  + G ++ A  +  N+P + + +
Sbjct: 466 S---------------MTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSI 510

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE----VTSINMLVACVRSGDIKTGREM 360
            W  ++ G  + +++ +  E+  + +    EP+     V   N+  AC R  +++  R++
Sbjct: 511 VWGSLL-GACRVHKNVQLAEMAAK-QILELEPENGAVYVLLCNIYAACKRWENLRQVRKL 568

Query: 361 -----FDSMPSPSVSSWNAMLSSY-SQSENHKEAIKLFREMQ 396
                    P  S+   N  +  + +  ++H ++ +++ +++
Sbjct: 569 MMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLE 610



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 201/472 (42%), Gaps = 74/472 (15%)

Query: 33  YSKCNNTHSAQHLFDKMPHKDIYSWNAILS--AQCKSDDLEFAYKLFDEMPERNVVSWNN 90
           Y K    H+ +H FD     +++   A +   + C+  DL  A K+FD      VV+WN 
Sbjct: 125 YGKVLLNHAVKHGFDS----NLFVQKAFIHMFSLCRLVDL--ARKVFDMGDAWEVVTWNI 178

Query: 91  LISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG 150
           ++S   R    +K+  ++ +M   G  P  +TL  +  A + L D+E G+  +  +    
Sbjct: 179 MLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGI 238

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMS---------------------------- 182
           +++N+ + N L+ ++A CG    A  VF+ M                             
Sbjct: 239 VERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFD 298

Query: 183 ---EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
              E + V++TAM+ G  + +R +EAL +FR M    V  D  ++ S+L  CA  G  +E
Sbjct: 299 QIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLG-ALE 357

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                           G+ V     K   + D  + N+L+DMY K G++  A+ +F  + 
Sbjct: 358 L---------------GEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMH 402

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            +   +W  MI G        +A+ +   M      PDE+T I +L AC  +G ++ G+ 
Sbjct: 403 HKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQS 462

Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
            F SM       P+V+ +  M+    ++   +EA ++   M    VKP+      +L +C
Sbjct: 463 FFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMP---VKPNSIVWGSLLGAC 519

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASG-----LIGIYSKCQRNELAERV 461
                    K V  A +     ++    +G     L  IY+ C+R E   +V
Sbjct: 520 RV------HKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQV 565



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 129/609 (21%), Positives = 249/609 (40%), Gaps = 106/609 (17%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           +S  + +A ++FD +P+  +  WN +I    R    +  +S+Y  M      P   T   
Sbjct: 53  ESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPF 112

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           + K  T  + +++G+      +K G D N++V  A + +++ C     A  VF+      
Sbjct: 113 LLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWE 172

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+  M+SG  +  +  ++  +F  M ++ VS +SV+L  +L  C++       D+  +
Sbjct: 173 VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSK-----LKDL--E 225

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL------- 298
                 + ++G  V         E +L L N L+DM+A  G+MD A+ +F N+       
Sbjct: 226 GGKHIYKYINGGIV---------ERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVIS 276

Query: 299 ------------------------PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
                                   PER  VSW  MI GY +  +  +A+ L + M+    
Sbjct: 277 WTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNV 336

Query: 335 EPDEVTSINMLVACV-----------------------------------RSGDIKTGRE 359
           +PDE T +++L AC                                    + G++   ++
Sbjct: 337 KPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKK 396

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F  M      +W AM+   + + + +EA+ +F  M    + PD  T   +L +C   G+
Sbjct: 397 VFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGM 456

Query: 420 LESGKQVHAASLKTASHIDNYVASG-LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMI 477
           +E G+    +         N    G ++ +  +  R E A  V   +P + + + W S++
Sbjct: 457 VEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLL 516

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHAQIEKDGY 536
               ++     A M  KQ+   E+ P   +   +L +       ++  RQV   + + G 
Sbjct: 517 GACRVHKNVQLAEMAAKQIL--ELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGI 574

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
                 G +L+E+    G++Y      + + G  +   ++ I+   +N        + +D
Sbjct: 575 KKT--PGCSLMELN---GNVY------EFVAGDQSHPQSKEIYAKLEN--------MMQD 615

Query: 597 MIASGVKPD 605
           +I +G  PD
Sbjct: 616 LIKAGYSPD 624


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 211/687 (30%), Positives = 349/687 (50%), Gaps = 60/687 (8%)

Query: 104 ALSVYNKMSNEGFVPT-HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALL 162
           A+S  + M+ +G  P   +T +S+ K+     D   G+  H  +I+  ++ +  + N+L+
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104

Query: 163 SLYAKCGWTKHAVPVFEEM---SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           SLY+K G +  A  VFE M    + + V+++AMM+      R ++A+++F   +   +  
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSL 278
           +    ++V+  C+       SD              G+      +K G FE+D+ +  SL
Sbjct: 165 NDYCYTAVIRACS------NSDFVGV----------GRVTLGFLMKTGHFESDVCVGCSL 208

Query: 279 LDMYAKN-GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           +DM+ K     ++A  +F  + E +VV+W +MI    Q     +AI     M   GFE D
Sbjct: 209 IDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268

Query: 338 ------------------------------------EVTSINMLVACVRSGDIKTGREMF 361
                                               E + ++M   C   G +   R++F
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVF 328

Query: 362 DSMPSPSVSSWNAMLSSYSQSEN-HKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGI 419
           D M   SV SW A+++ Y ++ N   EAI LF EM  +G V+P+  T +    +C  +  
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
              GKQV   + K     ++ VA+ +I ++ K  R E A+R F  + E ++V +N+ + G
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
              N    +AF    ++ + E+  + F+FA++LS  A + S  +G Q+H+Q+ K G   +
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
             V +ALI MY KCG I  A + F+ M  +N ++W  MI G+A++G+    +  +  MI 
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE 568

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
            GVKP+++T+VAIL+ACSH GLV  G   FNSM  DH ++P ++HY CM+D L RAG   
Sbjct: 569 EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 628

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           +A   I+ MP + D ++W   L +CR+H+N  L K AA ++  LDP   A Y  L+NIY+
Sbjct: 629 DAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYA 688

Query: 720 SLGRWDDLRAVRELMSENCIVKDPAYS 746
             G+W++   +R  M E  +VK+   S
Sbjct: 689 CAGKWEESTEMRRKMKERNLVKEGGCS 715



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 152/603 (25%), Positives = 269/603 (44%), Gaps = 89/603 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKL+HA ++   +  D+ L N LI LYSK  ++  A+ +F+ M                 
Sbjct: 81  GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR---------------- 124

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                          +R+VVSW+ +++    NG E  A+ V+ +    G VP      +V
Sbjct: 125 ------------RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172

Query: 127 FKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWT-KHAVPVFEEMSEP 184
            +A +    V  GR   G ++K G  + ++ V  +L+ ++ K   + ++A  VF++MSE 
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL 232

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N VT+T M++   +     EA+  F  M+      D  +LSSV   CA            
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA------------ 280

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIFSNLPER 301
               +      G+Q+H   I+ G   D+    SL+DMYAK   +G +D    +F  + + 
Sbjct: 281 ----ELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDH 334

Query: 302 SVVSWNVMIAGYGQKYQ-STKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGRE 359
           SV+SW  +I GY +    +T+AI L   M + G  EP+  T  +   AC    D + G++
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394

Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
           +                                   F+S+   ++ S+N  L    ++ N
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            ++A KL  E+  R +     T A +LS  A +G +  G+Q+H+  +K     +  V + 
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI +YSKC   + A RVF+ +   +++ W SMI G + +   I     F QM +  + P 
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574

Query: 505 QFSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
           + ++  +LS+C+ +    +G R  ++  E       +   + ++++ C+ G +  A +F 
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634

Query: 564 DMM 566
           + M
Sbjct: 635 NTM 637



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 200/425 (47%), Gaps = 56/425 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH+  +R+GL DD   C+ L+++Y+KC                         SA   
Sbjct: 288 GKQLHSWAIRSGLVDDV-ECS-LVDMYAKC-------------------------SADGS 320

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRN-GLEEKALSVYNKMSNEGFV-PTHITLA 124
            DD     K+FD M + +V+SW  LI+  ++N  L  +A++++++M  +G V P H T +
Sbjct: 321 VDDCR---KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S FKA   L D   G++  G   K GL  N  VAN+++S++ K    + A   FE +SE 
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++   + G  +     +A ++   +  + + + + + +S+L   A  G         
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG--------- 488

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            S  K      G+Q+H   +KLG   +  + N+L+ MY+K G +D+A  +F+ +  R+V+
Sbjct: 489 -SIRK------GEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI 541

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SW  MI G+ +   + + +E   +M   G +P+EVT + +L AC   G +  G   F+SM
Sbjct: 542 SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601

Query: 365 -----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                  P +  +  M+    ++    +A +    M F+    D       L +C     
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA---DVLVWRTFLGACRVHSN 658

Query: 420 LESGK 424
            E GK
Sbjct: 659 TELGK 663



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 180/371 (48%), Gaps = 25/371 (6%)

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
            DL  + S LD+ A++G      V FS+L +  + + +  +     K    + IE     
Sbjct: 40  GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLG----KLVHARLIEF---- 91

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM---PSPSVSSWNAMLSSYSQSENHK 386
                EPD V   +++    +SGD     ++F++M       V SW+AM++ Y  +    
Sbjct: 92  ---DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGREL 148

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG-- 444
           +AIK+F E    G+ P+      ++ +C+    +  G+      +KT  H ++ V  G  
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG-HFESDVCVGCS 207

Query: 445 LIGIYSKCQRN-ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           LI ++ K + + E A +VF ++ EL++V W  MI          EA  FF  M  +    
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC---GDIYGAR 560
            +F+ ++V S+CA+L +   G+Q+H+   + G V+D  V  +L++MY KC   G +   R
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCR 325

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQN-GYGDEAVRLYKDMIASG-VKPDDITFVAILTACSH 618
           + FD M   + ++W  +I GY +N     EA+ L+ +MI  G V+P+  TF +   AC +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385

Query: 619 SGLVDVGVEIF 629
                VG ++ 
Sbjct: 386 LSDPRVGKQVL 396


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 194/654 (29%), Positives = 330/654 (50%), Gaps = 63/654 (9%)

Query: 135 DVEHGRRCHGLVIKIG--LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           D   GR  H  V++ G     + + AN LL+ YAK G    A  +F+ M E N V+F  +
Sbjct: 60  DARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTL 119

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE-----GCGVESDVFAQSD 247
           M G A      EALE+FR + R+   ++   L+++L V          CG+         
Sbjct: 120 MQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGI--------- 170

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                       H    KLG + +  +  +L+D Y+  G +  A  +F  +  +  V+W 
Sbjct: 171 ------------HACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWT 218

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------------ 349
            M++ Y +      A+    +M+  GF+P+     + L A V                  
Sbjct: 219 AMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKT 278

Query: 350 -----------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                            + GDI+    +F+ +P   V  W+ ++S Y+QS  +++A ++F
Sbjct: 279 LYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMF 338

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
             M    V P+  +L+ +L +CA +  LE G+Q+H  ++K     + +V + L+ +Y+KC
Sbjct: 339 LRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKC 398

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
           +  E +  +F  + + + V WN++I G   +    +A   F +MR   M  TQ +F++VL
Sbjct: 399 RNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVL 458

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
            +CA  SS     Q+H+ IEK  + ND  V ++LI+ Y KCG I  A + F+ +   + V
Sbjct: 459 RACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVV 518

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +WN +I  YA +G    A+ L+  M  S +K +D+TFV++L+ C  +GLV+ G+ +FNSM
Sbjct: 519 SWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSM 578

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
            +DH ++P ++HYTC++  LGRAG   +A   I ++P    P++W  LLSSC +H NV L
Sbjct: 579 MMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVAL 638

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + AAE++  ++P +   Y LL+N+Y++ G  D++   R+ M    + K+   S
Sbjct: 639 GRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLS 692



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 156/648 (24%), Positives = 284/648 (43%), Gaps = 66/648 (10%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHK------DIYSWNAILSAQCKSDDLEFAYK 75
           D++ C R ++      +  + + +  ++  +      D +  N +L+   K   L  A +
Sbjct: 44  DSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARR 103

Query: 76  LFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD 135
           LFD MPERN VS+  L+      G  E+AL ++ ++  EG    H  L ++ K    +  
Sbjct: 104 LFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDA 163

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
                  H    K+G D+N +V  AL+  Y+ CG   HA  VF+ +   + VT+TAM+S 
Sbjct: 164 PGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSC 223

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL--GVCAREGCGVESDVFAQSDNKFSRN 253
            ++ D    AL  F  M       +   L+S L   VC                   S  
Sbjct: 224 YSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVC------------------LSSA 265

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
           + G+ +H  ++K  ++ + H+  +LLDMYAK GD++ A  IF  +P   V+ W+ +I+ Y
Sbjct: 266 LLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRY 325

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--------------- 358
            Q  Q+ +A E+  RM      P+E +   +L AC     ++ G                
Sbjct: 326 AQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESEL 385

Query: 359 --------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                               E+F S+   +  SWN ++  Y QS   ++A+ +F EM+  
Sbjct: 386 FVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAA 445

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
            +   + T + +L +CA    ++   Q+H+   K+  + D  V + LI  Y+KC     A
Sbjct: 446 HMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDA 505

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            +VF  I E D+V WNS+I+  +L+     A   F +M ++++     +F ++LS C   
Sbjct: 506 LKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGST 565

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNE 576
               QG  +   +  D  +       + ++ +  + G +  A +F  D+    + + W  
Sbjct: 566 GLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRA 625

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKP-DDITFVAILTACSHSGLVD 623
           ++       + + A+  Y       ++P D+ T+V +    + +G++D
Sbjct: 626 LLSSCVV--HKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILD 671



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 203/431 (47%), Gaps = 39/431 (9%)

Query: 41  SAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGL 100
           S + L+D  PH       A+L    K  D+E A+ +F+ +P  +V+ W+ LIS   ++  
Sbjct: 275 SVKTLYDTEPHVG----GALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQ 330

Query: 101 EEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANA 160
            E+A  ++ +M     VP   +L+ V +A   +  +E G + H L IK+G +  ++V NA
Sbjct: 331 NEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNA 390

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           L+ +YAKC   ++++ +F  + + NEV++  ++ G  ++    +AL +F  M    +   
Sbjct: 391 LMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLST 450

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
            V+ SSVL  CA                  S   H  Q+H L  K  F  D  + NSL+D
Sbjct: 451 QVTFSSVLRACANT----------------SSIKHAVQIHSLIEKSTFNNDTIVCNSLID 494

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
            YAK G +  A  +F ++ E  VVSWN +I+ Y    ++T A+EL  RM     + ++VT
Sbjct: 495 TYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVT 554

Query: 341 SINMLVACVRSGDIKTGREMFDSM-----PSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
            +++L  C  +G +  G  +F+SM       PS+  +  ++    ++    +A+K   ++
Sbjct: 555 FVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDI 614

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN--------YVASGL-- 445
                 P       +LSSC     +  G+      L    H +         Y A+G+  
Sbjct: 615 P---STPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILD 671

Query: 446 -IGIYSKCQRN 455
            + ++ K  RN
Sbjct: 672 EVALWRKSMRN 682



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 8/286 (2%)

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTA--SHIDNYVASGLIGIYSKCQRNELA 458
           K D    A  L  C A G   +G+ VHA  ++    + +D + A+ L+  Y+K      A
Sbjct: 42  KLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATA 101

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            R+F  +PE + V + +++ G +L     EA   F+++++       F   T+L     +
Sbjct: 102 RRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTM 161

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
            +      +HA   K G+  + FVG+ALI+ Y  CG +  AR  FD + GK+ VTW  M+
Sbjct: 162 DAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMV 221

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA--CSHSGLVDVGVEIFNSMQLDH 636
             Y++N   + A+  +  M  +G KP+     + L A  C  S L+  G+    S++  +
Sbjct: 222 SCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIH-GCSVKTLY 280

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
             EP +     ++D   + G   +A  + + +P  DD ++W  L+S
Sbjct: 281 DTEPHVG--GALLDMYAKCGDIEDAHAIFEMIP-HDDVILWSFLIS 323



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H+ I ++   +DT +CN LI+ Y+KC     A  +F+ +   D+ SWN+I+SA      
Sbjct: 473 IHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGR 532

Query: 70  LEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
              A +LFD M + ++    V++ +L+S     GL  + L ++N M
Sbjct: 533 ATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSM 578


>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 799

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 193/622 (31%), Positives = 312/622 (50%), Gaps = 82/622 (13%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           ++++     ++    K G    AV ++E+    +   FTA +SG  + +    AL +FR 
Sbjct: 180 ERSVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGVFRK 239

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M+   V  + ++   ++  C   G           +   + ++ G  +        FE+ 
Sbjct: 240 MVSCGVRPNGITFVCMIKACVGAG-----------EFGLAMSIVGSAIKSNF----FESS 284

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + + NSL+ +Y + GD  +A  +F  +  + VVSW  ++  Y +                
Sbjct: 285 IEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSE---------------- 328

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                              SGD+   R + D+MP  +  SW  +++ + Q  N  EA+KL
Sbjct: 329 -------------------SGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKL 369

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           + +M   G +P+ +  + +LS+CA +  L  G ++HA SLK  S  + +V+S LI +Y K
Sbjct: 370 YSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCK 429

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM--------------- 496
           C++   A+ +F  +PE +IVCWNS+ +G S N   +EA   FK+M               
Sbjct: 430 CKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGY 489

Query: 497 RQNEMY----------------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
            QN  +                P + +F++VL +CA L S   G+  HA+  K G    I
Sbjct: 490 AQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESI 549

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           F+G+AL +MY K GD+  +++ F  M  +N VTW  MI G A+NG  +E++ L++DM+A+
Sbjct: 550 FIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGLAEESILLFEDMMAT 609

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G+ P++ TF+A+L ACSH GLV+  +  F  MQ   G+ P   HYTCM+D L RAG   E
Sbjct: 610 GMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQ-AWGISPKEKHYTCMVDVLARAGRLIE 668

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           AE L+ + P K +   W  LLS+C  + N  + +RAA+ L  L   N+A Y LL+N+Y+S
Sbjct: 669 AEALLMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYAS 728

Query: 721 LGRWDDLRAVRELMSENCIVKD 742
            GRW D   +R LM    + KD
Sbjct: 729 CGRWKDAARIRVLMKGTTLKKD 750



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 227/456 (49%), Gaps = 27/456 (5%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N LI LY +  +  +A+ +FD+M  KD+ SW A+L    +S DL+ A ++ D MPERN V
Sbjct: 289 NSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEV 348

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  LI+   + G   +A+ +Y++M  +G  P     +SV  A   L D+  G R H   
Sbjct: 349 SWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARS 408

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K+G   N++V+++L+ +Y KC   + A  +F+ + E N V + ++ SG +   ++VEA+
Sbjct: 409 LKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAM 468

Query: 207 EMFRLM-IRKAVSIDSV---------------SLSSVLGVCAREGCGVESDVFAQSDNKF 250
            +F+ M  R   S +++               S +++L      G    S V     N  
Sbjct: 469 YLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLC 528

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
           S  V G+  H  TIKLG E  + +  +L DMYAK+GD+ S++ +F  +PER+ V+W  MI
Sbjct: 529 SL-VTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMI 587

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP----S 366
            G  +   + ++I L + M + G  P+E T + +L AC   G ++     F+ M     S
Sbjct: 588 QGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQAWGIS 647

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           P    +  M+   +++    EA  L  +      K +  + A +LS+C      E G++ 
Sbjct: 648 PKEKHYTCMVDVLARAGRLIEAEALLMKTP---SKSEANSWAALLSACNTYKNEEIGER- 703

Query: 427 HAASLKTASHIDNYVASGLIG-IYSKCQRNELAERV 461
            AA        DN     L+  +Y+ C R + A R+
Sbjct: 704 -AAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARI 738



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 248/573 (43%), Gaps = 117/573 (20%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYS----------------------------------K 35
           LHAH +R+G+  DT + + L+  Y+                                  K
Sbjct: 105 LHAHAVRSGVAADTSVASHLLTTYAAFARAAECDRAFGDCVAAGAASPFTYDFMVHEHVK 164

Query: 36  CNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISAL 95
             +  SA+ LFD MP + + S+  ++ A  K   +  A +L+++ P  +V  +   IS  
Sbjct: 165 AGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGF 224

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKN 154
           VRN L   AL V+ KM + G  P  IT   + KA     +        G  IK    + +
Sbjct: 225 VRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFESS 284

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEE-------------------------------MSE 183
           I V N+L++LY + G    A  VF+E                               M E
Sbjct: 285 IEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPE 344

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            NEV++  +++   +     EA++++  M+      +    SSVL  CA        D+ 
Sbjct: 345 RNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACA-----TLEDLR 399

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G ++H  ++K+G   ++ +S+SL+DMY K      A+ IF  LPE+++
Sbjct: 400 G-----------GARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNI 448

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           V WN + +GY    +  +A+ L ++M                                  
Sbjct: 449 VCWNSLASGYSYNGKMVEAMYLFKKM---------------------------------- 474

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            P+ +++SWN ++S Y+Q+    +A++ F  M   G  P   T + +L +CA +  L +G
Sbjct: 475 -PARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTG 533

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           K  HA ++K       ++ + L  +Y+K    + ++R+F+++PE + V W +MI GL+ N
Sbjct: 534 KMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAEN 593

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            L  E+ + F+ M    M P + +F  +L +C+
Sbjct: 594 GLAEESILLFEDMMATGMTPNEHTFLALLFACS 626



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 153/308 (49%), Gaps = 17/308 (5%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G  +HA  L+ G   + F+ + LI++Y KC     AQ +FD +P K+I  WN++ S   
Sbjct: 400 GGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYS 459

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +  +  A  LF +MP RN+ SWN +IS   +N     AL  +N M   G VP  IT +S
Sbjct: 460 YNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSS 519

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   L  +  G+  H   IK+G++++I++  AL  +YAK G  + +  +F +M E N
Sbjct: 520 VLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERN 579

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +VT+TAM+ GLA+     E++ +F  M+   ++ +  +  ++L  C+  G   ++  + +
Sbjct: 580 DVTWTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFE 639

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV- 304
               +  +   +   C                ++D+ A+ G +  AE +    P +S   
Sbjct: 640 KMQAWGISPKEKHYTC----------------MVDVLARAGRLIEAEALLMKTPSKSEAN 683

Query: 305 SWNVMIAG 312
           SW  +++ 
Sbjct: 684 SWAALLSA 691



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 32/167 (19%)

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY----------- 594
           ++  + K GDI  AR  FD M  ++ V++  M+    + G   EAV LY           
Sbjct: 158 MVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 217

Query: 595 --------------------KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
                               + M++ GV+P+ ITFV ++ AC  +G   + + I  S   
Sbjct: 218 TATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIK 277

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            +  E  ++    +I    R G    A  + DEM  K D V W  LL
Sbjct: 278 SNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVK-DVVSWTALL 323



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 4/118 (3%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK+ HA  ++ G+ +  F+   L ++Y+K  +  S++ +F +MP ++  +W A++   
Sbjct: 531 VTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGL 590

Query: 65  CKSDDLEFAYKLFDEMPERNVV----SWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
            ++   E +  LF++M    +     ++  L+ A    GL E+A+  + KM   G  P
Sbjct: 591 AENGLAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQAWGISP 648


>gi|357153657|ref|XP_003576524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic-like [Brachypodium distachyon]
          Length = 809

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 220/728 (30%), Positives = 368/728 (50%), Gaps = 55/728 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D Y  + ++    KS   E A K F++    + V WN +IS  VRN  +  A+ +++ M 
Sbjct: 103 DAYVCSGMIDLLAKSGRFEDALKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMV 162

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
                P   T + V  A     ++  GR  HGLV++   + +++V  +++++YAK G   
Sbjct: 163 RGSCEPNSFTYSGVLSACAMGAELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMI 222

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A+  F  M   N V++T  ++G  + +  V A+ + R M+R  VS++  + +S+L  C 
Sbjct: 223 AAMREFWRMPIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLAC- 281

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                        S     R V   Q+H + +K     D  +  +L+  YA  G ++ +E
Sbjct: 282 -------------SQMYMIREV--SQMHGMIMKKELYLDHAVKEALICTYANIGAIELSE 326

Query: 293 VIFSNLPERSVVS-WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE---------VTSI 342
             F  +   S    W+  I+G    +   ++++LL RM   G  P++         + SI
Sbjct: 327 TAFEEVGTVSSTRIWSTFISGV-SSHSLPRSLQLLMRMFRQGLRPNDRCYASVFSSMDSI 385

Query: 343 -----------------NMLVACV------RSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
                            ++LV         R  D++    +F  M      SW AM++ +
Sbjct: 386 EFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMVAGF 445

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           +   +  EA +LFR M   G KPD  TL+ ILS+C     L  GK +H   L+    I +
Sbjct: 446 ASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSACDKPECLLKGKTIHGHILRVHGEITS 505

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            ++  L+ +YSKCQ  + A R+F   P  D V ++SMI+G S N    EA   F+ M   
Sbjct: 506 -ISHCLVSMYSKCQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCSAEAMSLFQLMLST 564

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
                +F  +++LS CA ++    G+ +H    K G ++D+ V S+L+++Y K G++  +
Sbjct: 565 GFQIDRFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSLVKLYSKSGNLNDS 624

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           R+ FD +   + VTW  +I GYAQ+G G +A+ ++  MI  GVKPD +  V++L+ACS +
Sbjct: 625 RKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLVSVLSACSRN 684

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           GLV+ GV  F SM+  +GVEP+L HY CM+D LGR+G   +A+  I+ MP K D ++W  
Sbjct: 685 GLVEEGVNYFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPMKADLMVWST 744

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           L ++CR+H +  L     E   R D  +S  ++ L+NI ++ G W+++  VR+ M    +
Sbjct: 745 LFAACRVHNDAVLGG-FVENKIREDGYDSGSFATLSNILANSGDWEEVARVRKSMD---V 800

Query: 740 VKDPAYSL 747
            K+P +S+
Sbjct: 801 KKEPGWSM 808



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 166/630 (26%), Positives = 292/630 (46%), Gaps = 73/630 (11%)

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G  P+H+       A      V    + + +  K GL  + YV + ++ L AK G  + A
Sbjct: 64  GNTPSHLDFGKALAACVGPGHVAFAEQVYCVAWKDGLTGDAYVCSGMIDLLAKSGRFEDA 123

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
           +  FE+    + V +  ++SG  + D+   A++MF  M+R +   +S + S VL  CA  
Sbjct: 124 LKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSFTYSGVLSACAM- 182

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
             G E  V             G+ VH L ++   E D+ +  S+++MYAK+GDM +A   
Sbjct: 183 --GAELCV-------------GRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMRE 227

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----V 349
           F  +P R+VVSW   IAG+ Q+ +   A+ LL+ M   G   ++ T+ ++L+AC     +
Sbjct: 228 FWRMPIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMI 287

Query: 350 RS------------------------------GDIKTGREMFDSMPSPSVSS-WNAMLSS 378
           R                               G I+     F+ + + S +  W+  +S 
Sbjct: 288 REVSQMHGMIMKKELYLDHAVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISG 347

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
            S S +   +++L   M  +G++P+    A + SS   M  +E G+Q+H+  +K     D
Sbjct: 348 VS-SHSLPRSLQLLMRMFRQGLRPNDRCYASVFSS---MDSIEFGRQLHSLVIKDGFVHD 403

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
             V S L  +YS+    E + RVF  + E D V W +M+AG + +   +EAF  F+ M  
Sbjct: 404 VLVGSALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMIL 463

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK-DGYVNDIFVGSALIEMYCKCGDIY 557
           +   P   + + +LS+C K     +G+ +H  I +  G +  I     L+ MY KC +  
Sbjct: 464 DGFKPDYVTLSAILSACDKPECLLKGKTIHGHILRVHGEITSI--SHCLVSMYSKCQEAQ 521

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            AR+ FD    K+ V ++ MI GY+ NG   EA+ L++ M+++G + D     +IL+ C+
Sbjct: 522 TARRIFDATPCKDQVMFSSMISGYSTNGCSAEAMSLFQLMLSTGFQIDRFICSSILSLCA 581

Query: 618 HSGLVDVGVEIFNSMQLDH----GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
                D+   ++  +   H    G+   L   + ++    ++G+ +++  + DE+    D
Sbjct: 582 -----DIARPLYGKLLHGHAIKAGILSDLSVSSSLVKLYSKSGNLNDSRKVFDEIT-SPD 635

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
            V W  ++     H +     R A E+F L
Sbjct: 636 LVTWTAIIDGYAQHGS----GRDALEMFDL 661



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 229/504 (45%), Gaps = 57/504 (11%)

Query: 50  PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN 109
           P  D++   +I++   KS D+  A + F  MP RNVVSW   I+  V+      A+ +  
Sbjct: 201 PEYDVFVGTSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAIAGFVQEEEPVSAVRLLR 260

Query: 110 KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           +M   G      T  S+  A + +  +    + HG+++K  L  +  V  AL+  YA  G
Sbjct: 261 EMVRSGVSMNKYTATSILLACSQMYMIREVSQMHGMIMKKELYLDHAVKEALICTYANIG 320

Query: 170 WTKHAVPVFEEMSEPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
             + +   FEE+   +    ++  +SG++ +  +  +L++   M R+ +  +    +S  
Sbjct: 321 AIELSETAFEEVGTVSSTRIWSTFISGVS-SHSLPRSLQLLMRMFRQGLRPNDRCYAS-- 377

Query: 229 GVCAREGCGVESDVFAQSDN-KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
                        VF+  D+ +F     G+Q+H L IK GF  D+ + ++L  MY++  D
Sbjct: 378 -------------VFSSMDSIEF-----GRQLHSLVIKDGFVHDVLVGSALSTMYSRGDD 419

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           ++ +  +F  + ER  VSW  M+AG+     S +A  L + M   GF+PD VT   +L A
Sbjct: 420 LEDSYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSA 479

Query: 348 CVRS-----------------GDI-----------------KTGREMFDSMPSPSVSSWN 373
           C +                  G+I                 +T R +FD+ P      ++
Sbjct: 480 CDKPECLLKGKTIHGHILRVHGEITSISHCLVSMYSKCQEAQTARRIFDATPCKDQVMFS 539

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           +M+S YS +    EA+ LF+ M   G + DR   + ILS CA +     GK +H  ++K 
Sbjct: 540 SMISGYSTNGCSAEAMSLFQLMLSTGFQIDRFICSSILSLCADIARPLYGKLLHGHAIKA 599

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               D  V+S L+ +YSK      + +VF  I   D+V W ++I G + +    +A   F
Sbjct: 600 GILSDLSVSSSLVKLYSKSGNLNDSRKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMF 659

Query: 494 KQMRQNEMYPTQFSFATVLSSCAK 517
             M    + P      +VLS+C++
Sbjct: 660 DLMITLGVKPDTVVLVSVLSACSR 683



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 158/350 (45%), Gaps = 16/350 (4%)

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G  P        L++C   G +   +QV+  + K     D YV SG+I + +K  R E A
Sbjct: 64  GNTPSHLDFGKALAACVGPGHVAFAEQVYCVAWKDGLTGDAYVCSGMIDLLAKSGRFEDA 123

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            + F        VCWN++I+G   N  D  A   F  M +    P  F+++ VLS+CA  
Sbjct: 124 LKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSFTYSGVLSACAMG 183

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           +    GR VH  + +     D+FVG++++ MY K GD+  A + F  M  +N V+W   I
Sbjct: 184 AELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAI 243

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV-----GVEIFNSMQ 633
            G+ Q      AVRL ++M+ SGV  +  T  +IL ACS   ++       G+ +   + 
Sbjct: 244 AGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREVSQMHGMIMKKELY 303

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
           LDH V+  L      I      G    +E   +E+       IW   +S    H+     
Sbjct: 304 LDHAVKEAL------ICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVSSHS----L 353

Query: 694 KRAAEELFRLDPKNSAPYS-LLANIYSSLGRWDDLRAVRELMSENCIVKD 742
            R+ + L R+  +   P     A+++SS+   +  R +  L+ ++  V D
Sbjct: 354 PRSLQLLMRMFRQGLRPNDRCYASVFSSMDSIEFGRQLHSLVIKDGFVHD 403



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 4/109 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKLLH H ++ G+  D  + + L++LYSK  N + ++ +FD++   D+ +W AI+    +
Sbjct: 589 GKLLHGHAIKAGILSDLSVSSSLVKLYSKSGNLNDSRKVFDEITSPDLVTWTAIIDGYAQ 648

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
                 A ++FD M    V    V   +++SA  RNGL E+ ++ +  M
Sbjct: 649 HGSGRDALEMFDLMITLGVKPDTVVLVSVLSACSRNGLVEEGVNYFESM 697


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 215/696 (30%), Positives = 338/696 (48%), Gaps = 110/696 (15%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           DI  WN  ++   ++   + A +LF+ MP R+ +SWN +IS  + N     A  ++ KM 
Sbjct: 48  DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMP 107

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
               V  ++ ++   +                        +N+  A  L           
Sbjct: 108 TRDLVSWNVMISGCVRY-----------------------RNLRAARLL----------- 133

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
                F++M E + V++ AM+SG A+   V EA E+F  M  K    +S+S + +L    
Sbjct: 134 -----FDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYV 184

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL--SNSLLDMYAKNGDMDS 290
           + G   ++    +S                      +AD  L   N ++  Y K   +  
Sbjct: 185 QNGRIEDARRLFES----------------------KADWELISWNCMMGGYVKRNRLVD 222

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A  IF  +PER  VSWN MI+GY Q  +  +A    QR+       D  T   M+   V+
Sbjct: 223 ARGIFDRMPERDEVSWNTMISGYAQNGELLEA----QRLFEESPVRDVFTWTAMVSGYVQ 278

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
           +G +   R +FD MP  +  SWNA+++ Y Q +   +A +LF  M  + V          
Sbjct: 279 NGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNV---------- 328

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
            SS   M                   I  Y  +G I           A   F R+P+ D 
Sbjct: 329 -SSWNTM-------------------ITGYAQNGDIA---------QARNFFDRMPQRDS 359

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           + W ++IAG + +    EA   F +M+++     + +F + LS+CA++++   G+QVH +
Sbjct: 360 ISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGR 419

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + K G  +  +VG+AL+ MYCKCG+I  A   F+ +  K  V+WN MI GYA++G+G EA
Sbjct: 420 VVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEA 479

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           + L++ M  +G+ PDD+T V +L+ACSH+GLVD G E F SM  D+G+     HYTCMID
Sbjct: 480 LMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMID 539

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            LGRAG   +A+ L+  MP + D   W  LL + R+H N  L ++AA+ +F ++P NS  
Sbjct: 540 LLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGM 599

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y LL+N+Y++ GRW D+  +R  M +  + K P YS
Sbjct: 600 YVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 635



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 166/588 (28%), Positives = 282/588 (47%), Gaps = 64/588 (10%)

Query: 41  SAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGL 100
           SA  LF+ MP +   SWNA++S    +D    A +LF++MP R++VSWN +IS  VR   
Sbjct: 67  SALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRN 126

Query: 101 EEKALSVYNKMSNEGFVPTHITLA-----SVFKASTALLDVEHGRRCHGLVIKIGLDKNI 155
              A  ++++M     V  +  L+        K +  + D      C          KN 
Sbjct: 127 LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP---C----------KNS 173

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
              N +L+ Y + G  + A  +FE  ++   +++  MM G  K +R+V+A  +F  M  +
Sbjct: 174 ISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER 233

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESD-VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
               D VS ++++   A+ G  +E+  +F +S  +                     D+  
Sbjct: 234 ----DEVSWNTMISGYAQNGELLEAQRLFEESPVR---------------------DVFT 268

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
             +++  Y +NG +D A  +F  +PE++ VSWN +IAGY Q  +  +A EL + M     
Sbjct: 269 WTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPC--- 325

Query: 335 EPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
               V+S N M+    ++GDI   R  FD MP     SW A+++ Y+QS   +EA+ LF 
Sbjct: 326 --QNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFV 383

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           EM+  G + +R+T    LS+CA +  LE GKQVH   +K       YV + L+ +Y KC 
Sbjct: 384 EMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCG 443

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
             + A  VF  I E ++V WN+MIAG + +    EA M F+ M++  + P   +   VLS
Sbjct: 444 NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLS 503

Query: 514 SCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNT 571
           +C+      +G +    + +D G   +    + +I++  + G +  A+    +M    + 
Sbjct: 504 ACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDA 563

Query: 572 VTWNEM-----IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
            TW  +     IHG  +   G++A ++  +M     +PD+     +L+
Sbjct: 564 ATWGALLGASRIHGNTE--LGEKAAKMIFEM-----EPDNSGMYVLLS 604



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 217/449 (48%), Gaps = 45/449 (10%)

Query: 33  YSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLI 92
           Y K N    A+ +FD+MP +D  SWN ++S   ++ +L  A +LF+E P R+V +W  ++
Sbjct: 214 YVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMV 273

Query: 93  SALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLD 152
           S  V+NG+ ++A  V++ M  +  V  +  +A   +       ++  R     + +    
Sbjct: 274 SGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKR----MDQARE----LFEAMPC 325

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           +N+   N +++ YA+ G    A   F+ M + + +++ A+++G A++    EAL +F  M
Sbjct: 326 QNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEM 385

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
            R    ++  + +S L  CA E   +E                G+QVH   +K G E+  
Sbjct: 386 KRDGERLNRSTFTSTLSTCA-EIAALEL---------------GKQVHGRVVKAGLESGC 429

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
           ++ N+LL MY K G++D A ++F  + E+ VVSWN MIAGY +     +A+ L + MK  
Sbjct: 430 YVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKT 489

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKE 387
           G  PD+VT + +L AC  +G +  G E F SM      + +   +  M+    ++    +
Sbjct: 490 GILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDD 549

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN-------- 439
           A  L + M F   +PD  T   +L +    G  E G++  AA +      DN        
Sbjct: 550 AQNLMKNMPF---EPDAATWGALLGASRIHGNTELGEK--AAKMIFEMEPDNSGMYVLLS 604

Query: 440 --YVASGLIGIYSKCQRNELAERVFHRIP 466
             Y ASG  G   +  R  + +R   ++P
Sbjct: 605 NLYAASGRWGDVGR-MRLRMRDRGVKKVP 632



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 246/531 (46%), Gaps = 88/531 (16%)

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
           T  L  +AD+   N  +  + +NG  DSA  +F+++P RS +SWN MI+G     +   A
Sbjct: 40  TSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLA 99

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
            +L ++M +     D V+   M+  CVR  +++  R +FD MP   V SWNAMLS Y+Q+
Sbjct: 100 RQLFEKMPT----RDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQN 155

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAI--ILSSCAAMGILESGKQVHAASLKTASHIDNY 440
              KEA ++F EM      P + +++   +L++    G +E  +++     ++ +  +  
Sbjct: 156 GYVKEAKEIFDEM------PCKNSISWNGMLAAYVQNGRIEDARRL----FESKADWELI 205

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
             + ++G Y K  R   A  +F R+PE D V WN+MI+G + N   +EA   F++    +
Sbjct: 206 SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRD 265

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQI-EKD---------GYV------------- 537
           +    F++  ++S   +     + R+V   + EK+         GYV             
Sbjct: 266 V----FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFE 321

Query: 538 ----NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
                ++   + +I  Y + GDI  AR FFD M  +++++W  +I GYAQ+GYG+EA+ L
Sbjct: 322 AMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHL 381

Query: 594 YKDMIASGVKPDDITFVAILTACS-----------HSGLVDVGVE--------------- 627
           + +M   G + +  TF + L+ C+           H  +V  G+E               
Sbjct: 382 FVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCK 441

Query: 628 ---IFNSMQLDHGVEPI-LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD---DPVIWEVL 680
              I ++  +  G+E   +  +  MI    R G   EA ML + M       D V    +
Sbjct: 442 CGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGV 501

Query: 681 LSSCRLHANVRLAKRAAEELFRLD-----PKNSAPYSLLANIYSSLGRWDD 726
           LS+C   ++  L  +  E  + +        NS  Y+ + ++    GR DD
Sbjct: 502 LSAC---SHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDD 549



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 159/340 (46%), Gaps = 28/340 (8%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N +I  Y +C     A+ LF+ MP +++ SWN +++   ++ D+  A   FD MP+R+ +
Sbjct: 301 NAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSI 360

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  +I+   ++G  E+AL ++ +M  +G      T  S       +  +E G++ HG V
Sbjct: 361 SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV 420

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K GL+   YV NALL +Y KCG    A  VFE + E   V++  M++G A+     EAL
Sbjct: 421 VKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEAL 480

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            +F  M +  +  D V++  VL  C+  G   +   +                + +T   
Sbjct: 481 MLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY---------------FYSMTQDY 525

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVSWNVMIAG---YGQKYQSTKA 322
           G  A+      ++D+  + G +D A+ +  N+P E    +W  ++     +G      KA
Sbjct: 526 GITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKA 585

Query: 323 IELLQRMKSCGFEPDE----VTSINMLVACVRSGDIKTGR 358
            +++  M     EPD     V   N+  A  R GD+   R
Sbjct: 586 AKMIFEM-----EPDNSGMYVLLSNLYAASGRWGDVGRMR 620



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 77/189 (40%), Gaps = 33/189 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  +++ GL    ++ N L+ +Y KC N   A  +F+ +  K++ SWN        
Sbjct: 413 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNT------- 465

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I+   R+G  ++AL ++  M   G +P  +T+  V
Sbjct: 466 ------------------------MIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGV 501

Query: 127 FKASTALLDVEHGRR-CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EP 184
             A +    V+ G    + +    G+  N      ++ L  + G    A  + + M  EP
Sbjct: 502 LSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEP 561

Query: 185 NEVTFTAMM 193
           +  T+ A++
Sbjct: 562 DAATWGALL 570


>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
 gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
 gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
 gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
 gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
          Length = 685

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 184/544 (33%), Positives = 284/544 (52%), Gaps = 73/544 (13%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+LL   A+ G  D A  +F  +P+    S+N ++A   Q  +   A+  L  M +  F 
Sbjct: 85  NALLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFV 144

Query: 336 PDEVTSINMLVACVRSGDIKTG-----------------------------------REM 360
            +  +  + L AC      +TG                                   +++
Sbjct: 145 LNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKV 204

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FD+MP  ++ SWN++++ Y Q+    EA+ LF  M   G  PD  TLA ++S+CA +   
Sbjct: 205 FDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAG 264

Query: 421 ESGKQVHAASLKTASHIDNYVAS-GLIGIYSKCQRNELAERVFHRIP------------- 466
             G+QVH   +K+    ++ V +  L+ +Y+KC R   A+ VF R+              
Sbjct: 265 REGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITG 324

Query: 467 ------------------ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
                             E ++V WN +IA  + NS + EA   F ++++  ++PT +++
Sbjct: 325 YAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTY 384

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYV------NDIFVGSALIEMYCKCGDIYGARQF 562
             VL++CA L++   G+Q H  + K+G+       +D+FVG++L++MY K G I    + 
Sbjct: 385 GNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKV 444

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F+ M  ++ V+WN MI GYAQNG   +A+ L++ M+ S  +PD +T + +L+AC HSGLV
Sbjct: 445 FERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLV 504

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
             G   F SM  DHG+ P  DHYTCMID LGRAGH  E E LI+ MP + D V+W  LL 
Sbjct: 505 KEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLG 564

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           +CRLH N+ + + AA +LF LDP NS PY LL+N+Y+ LG+W D+  VR  M    + K 
Sbjct: 565 ACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQ 624

Query: 743 PAYS 746
           P  S
Sbjct: 625 PGCS 628



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 244/539 (45%), Gaps = 95/539 (17%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           +TFL N L+  Y++  + H A+ +FD MPH++ +S+NA+LSA  +    + A  LF  +P
Sbjct: 49  ETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
           + +  S+N +++AL ++G    AL     M  + FV    + AS   A  +      G +
Sbjct: 109 DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQ 168

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
            H LV K     ++Y+  AL+ +YAKC   + A  VF+ M E N V++ ++++   +   
Sbjct: 169 VHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGP 228

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
           V EAL +F  M++     D V+L+SV+  CA    G E                G+QVH 
Sbjct: 229 VDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGRE----------------GRQVHT 272

Query: 262 LTIKLG-FEADLHLSNSLLDMYAKNG-------------------------------DMD 289
             +K   F  D+ L+N+L+DMYAK G                               ++ 
Sbjct: 273 RMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVG 332

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC- 348
            A+ +F  + E++VV+WNV+IA Y    +  +A+ L  R+K     P   T  N+L AC 
Sbjct: 333 DAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACA 392

Query: 349 ----------------------------------------VRSGDIKTGREMFDSMPSPS 368
                                                   +++G I  G ++F+ M +  
Sbjct: 393 NLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARD 452

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
             SWNAM+  Y+Q+   K+A+ LF  M     +PD  T+  +LS+C   G+++ G++   
Sbjct: 453 NVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQ 512

Query: 429 ASLKTASHI---DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
           +  +    I   D+Y    +I +  +    +  E +   +P E D V W S++    L+
Sbjct: 513 SMTEDHGIIPTRDHYTC--MIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLH 569



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 212/441 (48%), Gaps = 61/441 (13%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           +KA   G+ +HA + ++    D ++   L+++Y+KC     AQ                 
Sbjct: 160 EKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQ----------------- 202

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
                         K+FD MPERN+VSWN+LI+   +NG  ++AL+++ +M  +GFVP  
Sbjct: 203 --------------KVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDE 248

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           +TLASV  A   L     GR+ H  ++K     +++ + NAL+ +YAKCG T  A  VF+
Sbjct: 249 VTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFD 308

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS------------V 227
            M+  + V+ T+M++G AK+  V +A  +F  M+ K V   +V +++            +
Sbjct: 309 RMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRL 368

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVH---GQQVHCLTIKLGF------EADLHLSNSL 278
                RE        +    N  +   +   GQQ H   +K GF      E+D+ + NSL
Sbjct: 369 FVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSL 428

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +DMY K G +     +F  +  R  VSWN MI GY Q  ++  A+ L +RM      PD 
Sbjct: 429 VDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDS 488

Query: 339 VTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFR 393
           VT I +L AC  SG +K GR  F SM       P+   +  M+    ++ + KE  +L  
Sbjct: 489 VTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIE 548

Query: 394 EMQFRGVKPDRTTLAIILSSC 414
            M    ++PD    A +L +C
Sbjct: 549 NMP---MEPDAVLWASLLGAC 566



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 188/407 (46%), Gaps = 69/407 (16%)

Query: 343 NMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM------- 395
            +L A  R G +   R +FD MP  +  S+NA+LS+ ++     +A+ LF  +       
Sbjct: 55  TLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCS 114

Query: 396 ----------QFRGVKPDR--------------TTLAIILSSCAAMGILESGKQVHAASL 431
                       RG    R               + A  LS+CA+     +G+QVHA   
Sbjct: 115 YNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVT 174

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           K++   D Y+ + L+ +Y+KC+R E A++VF  +PE +IV WNS+I     N    EA  
Sbjct: 175 KSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALA 234

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK-DGYVNDIFVGSALIEMY 550
            F +M ++   P + + A+V+S+CA L++  +GRQVH ++ K D +  D+ + +AL++MY
Sbjct: 235 LFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMY 294

Query: 551 CKCGDIYGARQFFD------------MMHG-------------------KNTVTWNEMIH 579
            KCG  + A+  FD            M+ G                   KN V WN +I 
Sbjct: 295 AKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIA 354

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE-----IFNSMQL 634
            YA N   +EA+RL+  +    V P   T+  +L AC++   + +G +     +    + 
Sbjct: 355 TYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRF 414

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           D G E  +     ++D   + G   +   + + M  +D+ V W  ++
Sbjct: 415 DSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDN-VSWNAMI 460



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 135/265 (50%), Gaps = 4/265 (1%)

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
           L  +LS+ A +G L   ++V         H + +  + L+   ++  R + A  +F  IP
Sbjct: 53  LNTLLSAYARLGSLHDARRV----FDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
           + D   +N+++A L+ +    +A  F   M  ++     +SFA+ LS+CA   +S  G Q
Sbjct: 109 DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQ 168

Query: 527 VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           VHA + K  + +D+++G+AL++MY KC     A++ FD M  +N V+WN +I  Y QNG 
Sbjct: 169 VHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGP 228

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
            DEA+ L+  M+  G  PD++T  ++++AC+       G ++   M         +    
Sbjct: 229 VDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNN 288

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCK 671
            ++D   + G   EA+ + D M  +
Sbjct: 289 ALVDMYAKCGRTWEAKCVFDRMAIR 313



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
           +  + F+ + L+  Y + G ++ AR+ FD M  +NT ++N ++   A+ G  D+A+ L+ 
Sbjct: 46  FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            +      PD  ++ A++ A +  G     +    +M  D
Sbjct: 106 AI----PDPDQCSYNAVVAALAQHGRGGDALRFLAAMHAD 141


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 217/659 (32%), Positives = 328/659 (49%), Gaps = 82/659 (12%)

Query: 157 VANALLSLYAKCGWTKHAVPVFEEMSEP--NEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
           V NALL+ YA+CG    A+ +F   +    + V++ +++S L    +   AL+  R M+ 
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161

Query: 215 KAV-SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF--EAD 271
           +    + S +L SVL  C        S +      +      G++ H   +K GF  E  
Sbjct: 162 EGRHDVSSFTLVSVLLAC--------SHLPGDDGRRL-----GREAHAFALKRGFLDEGR 208

Query: 272 LHLS-NSLLDMYAKNGDMDSAEVIFSNLPER------SVVSWNVMIAGYGQKYQSTKAIE 324
                N+LL MYA+ G +D A+ +F             VV+WN MI+   Q  +  +A+E
Sbjct: 209 ERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVE 268

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------------------------ 360
           +L  M S G  PD VT  + L AC R   +  GREM                        
Sbjct: 269 VLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMY 328

Query: 361 ------------FDSMPSPS--VSSWNAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRT 405
                       FD +P PS  +  WNAM+  Y+Q+   +EA++LF  M+   G  P  T
Sbjct: 329 AGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSET 388

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T++ +L +CA        + +H   +K     + +V + L+ +Y++    ++A R+F  I
Sbjct: 389 TMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMI 448

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR----------------QNEMYPTQFSFA 509
              D+V WN++I G  +     EAF    +M+                 +   P   +  
Sbjct: 449 DPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLM 508

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           T+L  CA L++  +G+++H    +    +DI VGSAL++MY KCG +  +R  FD +  +
Sbjct: 509 TLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRR 568

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VKPDDITFVAILTACSHSGLVDVGVEI 628
           N +TWN +I  Y  +G GDEAV L+ +M A G   P+++TF+A L ACSHSGLVD G+E+
Sbjct: 569 NVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLEL 628

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM-PCKDDPVIWEVLLSSCRLH 687
           F+ M+ DHGV+P  D + C++D LGRAG   EA  +I  M P +     W  LL +CRLH
Sbjct: 629 FHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLH 688

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            NV L + AAE LF L+P  ++ Y LL NIYS+ G WD   AVR  M    + K+P  S
Sbjct: 689 RNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCS 747



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 224/521 (42%), Gaps = 85/521 (16%)

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEG-FVPTHITLASVFKASTALLDVEH--- 138
           R+ VS+N+LISAL      E+AL     M  EG    +  TL SV  A + L   +    
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRL 190

Query: 139 GRRCHGLVIKIGL---DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP------NEVTF 189
           GR  H   +K G     +  +  NALLS+YA+ G    A  +F   +        + VT+
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTW 250

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             M+S L +  R  EA+E+   M+   V  D V+ +S L  C+R                
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSR---------------- 294

Query: 250 FSRNVHGQQVHCLTIK-LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE--RSVVSW 306
                 G+++H + +K     A+  ++++L+DMYA N  + SA  +F  +PE  R +  W
Sbjct: 295 LEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMW 354

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSINMLVACVRS-------------- 351
           N MI GY Q     +A+EL  RM++  G  P E T   +L AC RS              
Sbjct: 355 NAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVV 414

Query: 352 ---------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                G++   R +F  +    V SWN +++      +  EA +
Sbjct: 415 KRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQ 474

Query: 391 LFREMQFRGVK----------------PDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           L  EMQ                     P+  TL  +L  CAA+     GK++H  +++ A
Sbjct: 475 LVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHA 534

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V S L+ +Y+KC     +  VF R+P  +++ WN +I    ++ L  EA   F 
Sbjct: 535 LESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFD 594

Query: 495 QMRQ-NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           +M    E  P + +F   L++C+      +G ++   +E+D
Sbjct: 595 EMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERD 635



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 202/479 (42%), Gaps = 100/479 (20%)

Query: 7   GKLLHAHILRNGLFDD---TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           G+  HA  L+ G  D+    F  N L+ +Y++      AQ LF                 
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLF----------------- 233

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             ++    F+    D      VV+WN +IS LV+ G   +A+ V   M + G  P  +T 
Sbjct: 234 --RTTAAAFSPGGGD------VVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTF 285

Query: 124 ASVFKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           AS   A + L  +  GR  H +V+K   L  N +VA+AL+ +YA       A  VF+ + 
Sbjct: 286 ASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVP 345

Query: 183 EPNEV--TFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           EP+     + AM+ G A+     EALE+F R+      +    ++S VL  CAR      
Sbjct: 346 EPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACAR------ 399

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           S+ FA            + +H   +K G   +  + N+L+DMYA+ G+MD A  IF+ + 
Sbjct: 400 SEGFAGK----------EAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMID 449

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE----------------PDEVTSIN 343
            R VVSWN +I G   +  + +A +L+  M+                     P+ +T + 
Sbjct: 450 PRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMT 509

Query: 344 MLVAC-----------------------------------VRSGDIKTGREMFDSMPSPS 368
           +L  C                                    + G +   R +FD +P  +
Sbjct: 510 LLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRN 569

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGILESGKQV 426
           V +WN ++ +Y       EA+ LF EM   G   P+  T    L++C+  G+++ G ++
Sbjct: 570 VITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLEL 628



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 176/389 (45%), Gaps = 71/389 (18%)

Query: 7   GKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ +HA +L++  L  ++F+ + L+++Y+      SA+ +FD +P               
Sbjct: 301 GREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPE-------------- 346

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLA 124
                          P R +  WN +I    + G++E+AL ++++M  E G  P+  T++
Sbjct: 347 ---------------PSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMS 391

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            V  A             HG V+K G+  N +V NAL+ +YA+ G    A  +F  +   
Sbjct: 392 GVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPR 451

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI----------------DSVSLSSVL 228
           + V++  +++G        EA ++   M   + S                 ++++L ++L
Sbjct: 452 DVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLL 511

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
             CA                  +    G+++H   ++   E+D+ + ++L+DMYAK G +
Sbjct: 512 PGCA----------------ALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCL 555

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVA 347
            ++  +F  LP R+V++WNV+I  YG      +A+ L   M + G   P+EVT I  L A
Sbjct: 556 AASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAA 615

Query: 348 CVRSGDIKTGREMFDSM-------PSPSV 369
           C  SG +  G E+F  M       P+P +
Sbjct: 616 CSHSGLVDRGLELFHGMERDHGVKPTPDL 644



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/309 (21%), Positives = 135/309 (43%), Gaps = 34/309 (11%)

Query: 6   AGK-LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           AGK  +H ++++ G+  + F+ N L+++Y++      A+ +F  +  +D+ SWN +++  
Sbjct: 404 AGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGC 463

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                   A++L  EM    + S +   S+    G   + +            P +ITL 
Sbjct: 464 VVQGHAAEAFQLVTEM---QLPSPSPSSSSTTEEGEAHRCM------------PNNITLM 508

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++     AL     G+  HG  ++  L+ +I V +AL+ +YAKCG    +  VF+ +   
Sbjct: 509 TLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRR 568

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVF 243
           N +T+  ++          EA+ +F  M      + + V+  + L  C+  G        
Sbjct: 569 NVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGL------- 621

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ER 301
                   R +  +  H +    G +    L   ++D+  + G +D A  I +++   E+
Sbjct: 622 ------VDRGL--ELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQ 673

Query: 302 SVVSWNVMI 310
            V +W+ ++
Sbjct: 674 QVSAWSSLL 682



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 17/220 (7%)

Query: 426 VHAASLKTA--SHIDNYVASGLIGIYSKC-QRNELAERVFHRIPEL-DIVCWNSMIAGLS 481
           +HAA+L+ A        V + L+  Y++C   +           EL D V +NS+I+ L 
Sbjct: 85  LHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALC 144

Query: 482 LNSLDIEAFMFFKQMRQNEMYP-TQFSFATVLSSCAKLSSS---FQGRQVHAQIEKDGYV 537
           L      A    + M     +  + F+  +VL +C+ L        GR+ HA   K G++
Sbjct: 145 LFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFL 204

Query: 538 ND---IFVGSALIEMYCKCGDIYGARQFFDMMH------GKNTVTWNEMIHGYAQNGYGD 588
           ++    F  +AL+ MY + G +  A+  F          G + VTWN MI    Q G   
Sbjct: 205 DEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCA 264

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           EAV +  DM++ GV+PD +TF + L ACS   ++ +G E+
Sbjct: 265 EAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREM 304


>gi|357514793|ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358344437|ref|XP_003636296.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358345563|ref|XP_003636846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502231|gb|AES83434.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502781|gb|AES83984.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521707|gb|AET02161.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 791

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 212/714 (29%), Positives = 364/714 (50%), Gaps = 63/714 (8%)

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT--HITLASVFKAST 131
           + LF+++P+ N  S N  +   +   L  +ALSV+   +   F+     +TLA  FKA  
Sbjct: 38  HNLFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQNIDEVTLALSFKACR 97

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
               +  G + HG V+  G    + V+N+L+ +Y K G  + A+ VFE +S P+ V++  
Sbjct: 98  GEFIL--GAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNT 155

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           ++SG  K+   V+AL     M    V  D V+ ++ L  C         D     D+ F 
Sbjct: 156 ILSGFEKS---VDALNFACFMHLNGVVFDPVTYTTALSFCW--------DRDYWDDHGF- 203

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
             + G Q+H L +K GF  ++ + N+L+ MY++ G +D A  +F+ +  R +VSWN M++
Sbjct: 204 --LFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLS 261

Query: 312 GYGQKYQ--STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------- 360
           GY Q+ +    +A+ L   M   G   D V+    + AC  + +++ G+++         
Sbjct: 262 GYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGY 321

Query: 361 --------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                     F  M + +V SW  ++S      + +  + LF  
Sbjct: 322 GTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISI-----DEENVVSLFNA 376

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+  GV P+  T   +L +     +++ G  VH   LK+    +  V++ LI +Y+K + 
Sbjct: 377 MRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFES 436

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + ++++F  +     + WN++I+G + N L  EAF+ F    + E+ P Q++F +VL++
Sbjct: 437 IQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIK-EIKPNQYTFGSVLNA 495

Query: 515 CAKLS--SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
            A     S   G++ H+ + K G   D FV  AL++MY K G+I  +++ F+    K   
Sbjct: 496 IAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQF 555

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +W  MI  YA++G  +  + LYK++   G   D ITF+++L AC   G+VDVG  IF+SM
Sbjct: 556 SWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSM 615

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
              H +EP  +HY+ M+D LGR G   EAE L+ ++P      + + LL SC+LH NV +
Sbjct: 616 VKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCKLHGNVEM 675

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A+R  + L ++DP +S PY L+AN+Y+  G W+ +  VR+ M    + K+  +S
Sbjct: 676 AERVVDSLIQMDPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKKEVGFS 729



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 246/586 (41%), Gaps = 93/586 (15%)

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV--SIDSVSLSSVLG 229
           KH   +FE++ +PN  +    M      +   +AL +F+   +     +ID V+L+    
Sbjct: 35  KHEHNLFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQNIDEVTLALSFK 94

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            C  E                   + G Q+H   +  GF + + +SNSL+ MY K G  +
Sbjct: 95  ACRGE------------------FILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFE 136

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK---------------------------- 321
            A  +F  L    +VSWN +++G+ +   +                              
Sbjct: 137 LALCVFEGLSCPDIVSWNTILSGFEKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRD 196

Query: 322 ---------AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSW 372
                     ++L   +  CGF  +      ++    R G +     +F+ M    + SW
Sbjct: 197 YWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSW 256

Query: 373 NAMLSSYSQSEN--HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           NAMLS Y+Q       EA+ LF  M   G+  D  +L   +S+C     LE GKQ+H  +
Sbjct: 257 NAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLA 316

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
            K        V + LI  YSKC+    A+ VF  +   ++V W ++I      S+D E  
Sbjct: 317 QKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLI------SIDEENV 370

Query: 491 M-FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
           +  F  MR + +YP   +F  +L +    +   +G  VH    K    ++  V ++LI M
Sbjct: 371 VSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITM 430

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y K   I  +++ F+ ++ + T++WN +I GYAQNG   EA   +   I   +KP+  TF
Sbjct: 431 YAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIKE-IKPNQYTF 489

Query: 610 VAILTACS-------------HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
            ++L A +             HS L+ +G+            +P +     ++D  G+ G
Sbjct: 490 GSVLNAIAAAEDISLKHGQRCHSHLIKLGLN----------TDPFVA--GALLDMYGKRG 537

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           + +E++ + +E P K     W  ++S+   H +        +E+ R
Sbjct: 538 NINESQRVFNETPEKTQ-FSWTGMISAYARHGDYESVMSLYKEIER 582



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 239/505 (47%), Gaps = 71/505 (14%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N+++   CK+   E A  +F+ +   ++VSWN ++S   ++ ++    + +  ++   F 
Sbjct: 123 NSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGFEKS-VDALNFACFMHLNGVVFD 181

Query: 118 PTHITLASVFKASTALLDVEH----GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
           P   T A  F       D +H    G + H LV+K G    +++ NAL+++Y++ G    
Sbjct: 182 PVTYTTALSFCWDRDYWD-DHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDE 240

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRV--VEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
           A  VF EM+  + V++ AM+SG A+      +EA+ +F  M+R+ + +D VSL+  +  C
Sbjct: 241 AGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISAC 300

Query: 232 AREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
                             +++N+  G+Q+H L  KLG+   + + N L+  Y+K   +  
Sbjct: 301 G-----------------YTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRD 343

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--- 347
           A+ +F ++  R+VVSW  +I+           + L   M+  G  P++VT I +L A   
Sbjct: 344 AKAVFQDMSARNVVSWTTLIS-----IDEENVVSLFNAMRVDGVYPNDVTFIGLLHAITI 398

Query: 348 -------------CVRS-------------------GDIKTGREMFDSMPSPSVSSWNAM 375
                        C++S                     I+  +++F+ +      SWNA+
Sbjct: 399 RNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNAL 458

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG--ILESGKQVHAASLKT 433
           +S Y+Q+   KEA   F     + +KP++ T   +L++ AA     L+ G++ H+  +K 
Sbjct: 459 ISGYAQNGLCKEAFLTFLS-AIKEIKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKL 517

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM-F 492
             + D +VA  L+ +Y K      ++RVF+  PE     W  MI+  + +  D E+ M  
Sbjct: 518 GLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARHG-DYESVMSL 576

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAK 517
           +K++ +        +F +VL++C +
Sbjct: 577 YKEIEREGSNLDSITFLSVLAACCR 601



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 177/374 (47%), Gaps = 28/374 (7%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N ++S   K   L  A  +F +M  RNVVSW  LIS       EE  +S++N M  +G  
Sbjct: 329 NVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISID-----EENVVSLFNAMRVDGVY 383

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  +T   +  A T    V+ G   HGL +K  L     V+N+L+++YAK    + +  +
Sbjct: 384 PNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKI 443

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           FEE++    +++ A++SG A+     EA   F   I K +  +  +  SVL   A     
Sbjct: 444 FEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAI-KEIKPNQYTFGSVLNAIA----- 497

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                 A  D       HGQ+ H   IKLG   D  ++ +LLDMY K G+++ ++ +F+ 
Sbjct: 498 ------AAEDISLK---HGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNE 548

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
            PE++  SW  MI+ Y +       + L + ++  G   D +T +++L AC R G +  G
Sbjct: 549 TPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVG 608

Query: 358 REMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
             +FDSM       P+   ++ M+    +     EA +L  ++      P  + L  +L 
Sbjct: 609 HIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIP---GGPGLSVLQSLLG 665

Query: 413 SCAAMGILESGKQV 426
           SC   G +E  ++V
Sbjct: 666 SCKLHGNVEMAERV 679



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 211/457 (46%), Gaps = 68/457 (14%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNG--LEEKALSVYNK 110
           +++  NA+++   +   L+ A ++F+EM  R++VSWN ++S   + G     +A+ ++  
Sbjct: 221 EVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGN 280

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M  EG +  H++L     A     ++E G++ HGL  K+G   ++ V N L+S Y+KC  
Sbjct: 281 MVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKV 340

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            + A  VF++MS  N V++T ++S     + VV    +F  M    V  + V+   +L  
Sbjct: 341 LRDAKAVFQDMSARNVVSWTTLIS--IDEENVV---SLFNAMRVDGVYPNDVTFIGLLHA 395

Query: 231 CAREGCGVESDVFAQSDNKFSRNV--HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
                                RN+   G  VH L +K    ++ ++SNSL+ MYAK   +
Sbjct: 396 IT------------------IRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESI 437

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQK----------YQSTKAIEL------------- 325
             ++ IF  L  +  +SWN +I+GY Q             + K I+              
Sbjct: 438 QESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIKEIKPNQYTFGSVLNAIA 497

Query: 326 ------LQRMKSC-------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSW 372
                 L+  + C       G   D   +  +L    + G+I   + +F+  P  +  SW
Sbjct: 498 AAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSW 557

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
             M+S+Y++  +++  + L++E++  G   D  T   +L++C   G+++ G  +  + +K
Sbjct: 558 TGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVK 617

Query: 433 TAS---HIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
             S     ++Y  S ++ +  +  R + AE + H+IP
Sbjct: 618 KHSIEPTPEHY--SIMVDMLGRVGRLDEAEELMHQIP 652



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 60/109 (55%), Gaps = 4/109 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  H+H+++ GL  D F+   L+++Y K  N + +Q +F++ P K  +SW  ++SA  +
Sbjct: 507 GQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYAR 566

Query: 67  SDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKM 111
             D E    L+ E+       + +++ ++++A  R G+ +    +++ M
Sbjct: 567 HGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSM 615


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 187/654 (28%), Positives = 339/654 (51%), Gaps = 60/654 (9%)

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           ++V   ++ H L++  G  +NI ++  L++LY   G    +   F+ + + N  ++ +++
Sbjct: 33  VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSII 92

Query: 194 SGLAKTDRVVEAL----EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           S   +  +  EA+    ++F +     +  D  +   +L  C                  
Sbjct: 93  SAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSL--------------- 137

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
               V G++VHC   K+GFE D+ ++ SL+ +Y++ G +D A  +F ++P + V SWN M
Sbjct: 138 ----VDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAM 193

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------ 357
           I+G+ Q   +  A+ +L RMK  G + D +T  ++L  C +S D+  G            
Sbjct: 194 ISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGL 253

Query: 358 -----------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                  + +FD M    + SWN+++++Y Q+ +   A++ F+ 
Sbjct: 254 DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKG 313

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQ 453
           MQ  G++PD  T+  + S  + +      + +    ++      D  + + L+ +Y+K  
Sbjct: 314 MQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLG 373

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQFSFATVL 512
               A  VF ++P  D + WN+++ G + N L  EA   +  M +  +  P Q ++ +++
Sbjct: 374 YMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSII 433

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
            + + + +  QG ++HA++ K+    D+FV + LI++Y KCG +  A   F  +    +V
Sbjct: 434 PAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSV 493

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
            WN +I     +G G+EA++L+KDM+A  VK D ITFV++L+ACSHSGLVD G + F+ M
Sbjct: 494 PWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIM 553

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
           Q ++G++P L HY CM+D LGRAG+  +A  L+  MP + D  IW  LLS+C+++ N  L
Sbjct: 554 QKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAEL 613

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
              A++ L  +D +N   Y LL+NIY++  +W+ +  VR L  +  + K P +S
Sbjct: 614 GTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWS 667



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 167/645 (25%), Positives = 304/645 (47%), Gaps = 109/645 (16%)

Query: 32  LYSKCNNTHSAQHL------FDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNV 85
           L++ C N ++ + L      F K   ++I     +++      D+  +   FD + ++N+
Sbjct: 28  LFNSCVNVNATKKLHALLLVFGK--SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNI 85

Query: 86  VSWNNLISALVRNGLEEKALSVYNK---MSNEGFV-PTHITLASVFKASTALLDVEHGRR 141
            SWN++ISA VR G   +A++  N+   M   G + P   T   + KA  +L+D   G++
Sbjct: 86  FSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKK 142

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
            H  V K+G + +++VA +L+ LY++ G    A  VF +M   +  ++ AM+SG  +   
Sbjct: 143 VHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGN 202

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
              AL +   M  + V +D+++++S+L VC            AQSD+     ++G  +H 
Sbjct: 203 AAGALGVLNRMKGEGVKMDTITVASILPVC------------AQSDDV----INGVLIHL 246

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
             +K G ++D+ +SN+L++MY+K G +  A+++F  +  R +VSWN +IA Y Q    + 
Sbjct: 247 HVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPST 306

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------------------- 360
           A+   + M+  G  PD +T +++     +  D +  R +                     
Sbjct: 307 ALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALV 366

Query: 361 ---------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM-QFRGVKPDR 404
                          FD +P     SWN +++ Y+Q+    EAI  +  M + R   P++
Sbjct: 367 NMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQ 426

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
            T   I+ + + +G L+ G ++HA  +K + ++D +VA+ LI +Y KC R E A  +F+ 
Sbjct: 427 GTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYE 486

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           IP    V WN++IA L ++    EA   FK M    +     +F ++LS+C+        
Sbjct: 487 IPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH------- 539

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI----YGARQFFDMMHGKNTVTWNEMIHG 580
                              S L++   KC DI    YG +    + H      +  M+  
Sbjct: 540 -------------------SGLVDEGQKCFDIMQKEYGIKP--SLKH------YGCMVDL 572

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
             + GY ++A  L ++M    ++PD   + A+L+AC   G  ++G
Sbjct: 573 LGRAGYLEKAYELVRNM---PIQPDASIWGALLSACKIYGNAELG 614



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 217/458 (47%), Gaps = 84/458 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK +H  + + G  DD F+   L+ LYS+                             
Sbjct: 138 VDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGV-------------------------- 171

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                L+ A+K+F +MP ++V SWN +IS   +NG    AL V N+M  EG     IT+A
Sbjct: 172 -----LDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+        DV +G   H  V+K GLD +++V+NAL+++Y+K G  + A  VF++M   
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR 286

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ ++++   + +    AL  F+ M    +  D +++ S+            + +F+
Sbjct: 287 DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL------------TSIFS 334

Query: 245 Q-SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
           Q SD + SR++ G  +     +   + D+ + N+L++MYAK G M+ A  +F  LP +  
Sbjct: 335 QLSDQRISRSILGFVIR----REWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDT 390

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSC-GFEPDEVTSINMLVACVRSGDIKTGRE--- 359
           +SWN ++ GY Q   +++AI+    M+ C    P++ T ++++ A    G ++ G +   
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450

Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                           +F  +P  +   WNA+++S       +E
Sbjct: 451 KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEE 510

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           A++LF++M    VK D  T   +LS+C+  G+++ G++
Sbjct: 511 ALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK 548



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 204/426 (47%), Gaps = 57/426 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G L+H H+L++GL  D F+ N LI +YSK      AQ +FD+M  +D+ SWN+I++A 
Sbjct: 239 INGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAY 298

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +++D   A + F  M                  G+    L+V             ++L 
Sbjct: 299 EQNNDPSTALRFFKGMQ---------------LGGIRPDLLTV-------------VSLT 330

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           S+F   + L D    R   G VI+   LDK++ + NAL+++YAK G+   A  VF+++  
Sbjct: 331 SIF---SQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPR 387

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI-DSVSLSSVLGVCAREGCGVESDV 242
            + +++  +++G  +     EA++ + +M     +I +  +  S++   +  G   +   
Sbjct: 388 KDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQ--- 444

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G ++H   IK     D+ ++  L+D+Y K G ++ A  +F  +P  +
Sbjct: 445 -------------GMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDT 491

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
            V WN +IA  G   +  +A++L + M +   + D +T +++L AC  SG +  G++ FD
Sbjct: 492 SVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFD 551

Query: 363 SMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
            M       PS+  +  M+    ++   ++A +L R M    ++PD +    +LS+C   
Sbjct: 552 IMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP---IQPDASIWGALLSACKIY 608

Query: 418 GILESG 423
           G  E G
Sbjct: 609 GNAELG 614



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 138/288 (47%), Gaps = 26/288 (9%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           KD+   NA+++   K   +  A+ +FD++P ++ +SWN L++   +NGL  +A+  YN M
Sbjct: 357 KDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMM 416

Query: 112 SN-EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
                 +P   T  S+  A + +  ++ G + H  +IK  L  +++VA  L+ LY KCG 
Sbjct: 417 EECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGR 476

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            + A+ +F E+     V + A+++ L    R  EAL++F+ M+ + V  D ++  S+L  
Sbjct: 477 LEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSA 536

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI---KLGFEADLHLSNSLLDMYAKNGD 287
           C+  G   E                GQ+  C  I   + G +  L     ++D+  + G 
Sbjct: 537 CSHSGLVDE----------------GQK--CFDIMQKEYGIKPSLKHYGCMVDLLGRAGY 578

Query: 288 MDSAEVIFSNLPERSVVS-WNVMIAG---YGQKYQSTKAIELLQRMKS 331
           ++ A  +  N+P +   S W  +++    YG     T A + L  + S
Sbjct: 579 LEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDS 626


>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 200/644 (31%), Positives = 315/644 (48%), Gaps = 54/644 (8%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           R  H  ++  GL + +     LLS YA  G    A  V +E   P+  T+   +   A  
Sbjct: 40  RALHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAA 99

Query: 200 DRVVEALEMFRLMIRKAVSI--DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
            R  +AL + R M R+      D V LS  L    R            +D ++     G+
Sbjct: 100 GRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRS-----------ADFRY-----GR 143

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           ++HC  +K G  AD  + N L+DMYAK GD+++A  +F  +  R+VVSW  M++G  Q  
Sbjct: 144 RLHCNAVKAG-GADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNG 202

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------------------- 348
            + + + L   M+     P E T  ++L+AC                             
Sbjct: 203 FAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITA 262

Query: 349 ------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                 V+ G+++  R +FD +    +  W  M+  Y+Q+ +  +A+ LF + +F  + P
Sbjct: 263 AVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVP 322

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           +  T+A +LS+ A +  L  G+ +HA S+K     ++ V + L+ +Y+KC+    A  +F
Sbjct: 323 NSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIF 382

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
            RI   D+V WNS+IAG   N +  EA M F QMR     P   S    LS+C  L    
Sbjct: 383 GRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLL 442

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G+  H    K  ++++++V +AL+ +Y KC D+  A++ F  M  +N+VTW  MI GY 
Sbjct: 443 IGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYG 502

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
             G    ++ L   M+   ++P+++ F +IL+ CSH+G+V VG   F+SM     + P +
Sbjct: 503 MQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSM 562

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
            HY CM+D L RAG+  EA   I +MP   D  IW   L  C+LH+ +   + A   +  
Sbjct: 563 KHYACMVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMV 622

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L P     Y L++N+Y+S GRWD   A+R LM E  +VK P  S
Sbjct: 623 LHPDKPDFYVLMSNLYTSYGRWDKSLAIRRLMQERGLVKLPGCS 666



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 225/474 (47%), Gaps = 63/474 (13%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D +  N ++    K+ DLE A K+FD +  RNVVSW +++S  ++NG  E+ L+++N+M 
Sbjct: 156 DGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMR 215

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            E  +P+  T+ASV  A T L  +  GR  HG VIK G+  N ++  A+L +Y KCG  +
Sbjct: 216 EERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVE 275

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI--DSVSLSSVLGV 230
            A  +F+E+   + V +T M+ G  +    ++AL +F    +K V I  +SV++++VL  
Sbjct: 276 DARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFS--DKKFVHIVPNSVTIATVLSA 333

Query: 231 CAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            A+                  RN+  G+ +H +++KL    +  + N+L+DMYAK   + 
Sbjct: 334 SAQ-----------------LRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALS 376

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
            A  IF  +  + VV+WN +IAGY +     +A+ L  +M+  G  PD ++ +N L ACV
Sbjct: 377 EANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACV 436

Query: 350 RSGDIKTGR-----------------------------------EMFDSMPSPSVSSWNA 374
             GD+  G+                                    +F  M   +  +W A
Sbjct: 437 CLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGA 496

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH---AASL 431
           M+  Y    +   +I L  +M    ++P+      ILS+C+  G++  GK      A   
Sbjct: 497 MIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYF 556

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS 484
                + +Y    ++ + ++    E A     ++P   DI  W + + G  L+S
Sbjct: 557 NITPSMKHYAC--MVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHS 608



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 151/641 (23%), Positives = 274/641 (42%), Gaps = 94/641 (14%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + LHA +L +GL        +L+  Y+   +  SA+ + D+ P  D Y++   L     +
Sbjct: 40  RALHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAA 99

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                A  L   M  R   + +++                             + L+   
Sbjct: 100 GRHADALALHRGMRRRCPEAHDDV-----------------------------VLLSLAL 130

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KAS    D  +GRR H   +K G   + +V N L+ +YAK G  ++A  VF+ +   N V
Sbjct: 131 KASVRSADFRYGRRLHCNAVKAG-GADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVV 189

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++T+M+SG  +     E L +F  M  + V     +++SVL  C   G            
Sbjct: 190 SWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLG------------ 237

Query: 248 NKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                ++H G+ VH   IK G   +  ++ ++LDMY K G+++ A  +F  L    +V W
Sbjct: 238 -----SLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLW 292

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
             MI GY Q      A+ L    K     P+ VT   +L A  +  ++  GR        
Sbjct: 293 TTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVK 352

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +F  + +  V +WN++++ Y +++   EA+ L
Sbjct: 353 LLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALML 412

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +M+ +G  PD  ++   LS+C  +G L  GK  H  ++K A   + YV + L+ +Y+K
Sbjct: 413 FSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNK 472

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     A+RVF  + E + V W +MI G  +      +     +M ++ + P +  F ++
Sbjct: 473 CADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSI 532

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVN---DIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           LS+C+       G+     + +  Y N    +   + ++++  + G++  A +F   M  
Sbjct: 533 LSTCSHTGMVSVGKMCFDSMAQ--YFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPM 590

Query: 569 KNTVT-WNEMIHG---YAQNGYGDEAVRLYKDMIASGVKPD 605
              ++ W   +HG   +++  +G+EA+   + M+    KPD
Sbjct: 591 PADISIWGAFLHGCKLHSRLEFGEEAIN--RMMVLHPDKPD 629



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 207/424 (48%), Gaps = 55/424 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  ++++G+  + F+   ++++Y KC                              
Sbjct: 242 GRWVHGSVIKHGMVFNPFITAAVLDMYVKCG----------------------------- 272

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             ++E A +LFDE+   ++V W  +I    +NG    AL +++       VP  +T+A+V
Sbjct: 273 --EVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATV 330

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             AS  L ++  GR  H + +K+ + +N  V NAL+ +YAKC     A  +F  +S  + 
Sbjct: 331 LSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDV 390

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+ ++++G  + D   EAL +F  M  +  S D++S+ + L  C   G     D+    
Sbjct: 391 VTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLG-----DLLI-- 443

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+  H   +K  F ++++++ +LL++Y K  D+ SA+ +FS + ER+ V+W
Sbjct: 444 ---------GKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTW 494

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             MI GYG +  S  +I+LL +M     +P+EV   ++L  C  +G +  G+  FDSM  
Sbjct: 495 GAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQ 554

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               +PS+  +  M+   +++ N +EA++  ++M    +  D +     L  C     LE
Sbjct: 555 YFNITPSMKHYACMVDVLARAGNLEEALEFIQKMP---MPADISIWGAFLHGCKLHSRLE 611

Query: 422 SGKQ 425
            G++
Sbjct: 612 FGEE 615


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 210/683 (30%), Positives = 348/683 (50%), Gaps = 60/683 (8%)

Query: 104 ALSVYNKMSNEGFVPT-HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALL 162
           A+S  + M+ +G  P   +T +S+ K+     D   G+  H  +I+  ++ +  + N+L+
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104

Query: 163 SLYAKCGWTKHAVPVFEEM---SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           SLY+K G +  A  VFE M    + + V+++AMM+      R ++A+++F   +   +  
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSL 278
           +    ++V+  C+       SD              G+      +K G FE+D+ +  SL
Sbjct: 165 NDYCYTAVIRACS------NSDFVGV----------GRVTLGFLMKTGHFESDVCVGCSL 208

Query: 279 LDMYAKN-GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           +DM+ K     ++A  +F  + E +VV+W +MI    Q     +AI     M   GFE D
Sbjct: 209 IDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268

Query: 338 ------------------------------------EVTSINMLVACVRSGDIKTGREMF 361
                                               E + ++M   C   G +   R++F
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVF 328

Query: 362 DSMPSPSVSSWNAMLSSYSQSEN-HKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGI 419
           D M   SV SW A+++ Y ++ N   EAI LF EM  +G V+P+  T +    +C  +  
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
              GKQV   + K     ++ VA+ +I ++ K  R E A+R F  + E ++V +N+ + G
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
              N    +AF    ++ + E+  + F+FA++LS  A + S  +G Q+H+Q+ K G   +
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
             V +ALI MY KCG I  A + F+ M  +N ++W  MI G+A++G+    +  +  MI 
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE 568

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
            GVKP+++T+VAIL+ACSH GLV  G   FNSM  DH ++P ++HY CM+D L RAG   
Sbjct: 569 EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 628

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           +A   I+ MP + D ++W   L +CR+H+N  L K AA ++  LDP   A Y  L+NIY+
Sbjct: 629 DAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYA 688

Query: 720 SLGRWDDLRAVRELMSENCIVKD 742
             G+W++   +R  M E  +VK+
Sbjct: 689 CAGKWEESTEMRRKMKERNLVKE 711



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 152/603 (25%), Positives = 269/603 (44%), Gaps = 89/603 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKL+HA ++   +  D+ L N LI LYSK  ++  A+ +F+ M                 
Sbjct: 81  GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM----------------- 123

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                          +R+VVSW+ +++    NG E  A+ V+ +    G VP      +V
Sbjct: 124 -----------RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172

Query: 127 FKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWT-KHAVPVFEEMSEP 184
            +A +    V  GR   G ++K G  + ++ V  +L+ ++ K   + ++A  VF++MSE 
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL 232

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N VT+T M++   +     EA+  F  M+      D  +LSSV   CA            
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA------------ 280

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIFSNLPER 301
               +      G+Q+H   I+ G   D+    SL+DMYAK   +G +D    +F  + + 
Sbjct: 281 ----ELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDH 334

Query: 302 SVVSWNVMIAGYGQKYQ-STKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGRE 359
           SV+SW  +I GY +    +T+AI L   M + G  EP+  T  +   AC    D + G++
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394

Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
           +                                   F+S+   ++ S+N  L    ++ N
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            ++A KL  E+  R +     T A +LS  A +G +  G+Q+H+  +K     +  V + 
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI +YSKC   + A RVF+ +   +++ W SMI G + +   I     F QM +  + P 
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574

Query: 505 QFSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
           + ++  +LS+C+ +    +G R  ++  E       +   + ++++ C+ G +  A +F 
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634

Query: 564 DMM 566
           + M
Sbjct: 635 NTM 637



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 200/425 (47%), Gaps = 56/425 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH+  +R+GL DD   C+ L+++Y+KC                         SA   
Sbjct: 288 GKQLHSWAIRSGLVDDV-ECS-LVDMYAKC-------------------------SADGS 320

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRN-GLEEKALSVYNKMSNEGFV-PTHITLA 124
            DD     K+FD M + +V+SW  LI+  ++N  L  +A++++++M  +G V P H T +
Sbjct: 321 VDDCR---KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S FKA   L D   G++  G   K GL  N  VAN+++S++ K    + A   FE +SE 
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++   + G  +     +A ++   +  + + + + + +S+L   A  G         
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG--------- 488

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            S  K      G+Q+H   +KLG   +  + N+L+ MY+K G +D+A  +F+ +  R+V+
Sbjct: 489 -SIRK------GEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI 541

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SW  MI G+ +   + + +E   +M   G +P+EVT + +L AC   G +  G   F+SM
Sbjct: 542 SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601

Query: 365 -----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                  P +  +  M+    ++    +A +    M F+    D       L +C     
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA---DVLVWRTFLGACRVHSN 658

Query: 420 LESGK 424
            E GK
Sbjct: 659 TELGK 663



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 180/371 (48%), Gaps = 25/371 (6%)

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
            DL  + S LD+ A++G      V FS+L +  + + +  +     K    + IE     
Sbjct: 40  GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLG----KLVHARLIEF---- 91

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM---PSPSVSSWNAMLSSYSQSENHK 386
                EPD V   +++    +SGD     ++F++M       V SW+AM++ Y  +    
Sbjct: 92  ---DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGREL 148

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG-- 444
           +AIK+F E    G+ P+      ++ +C+    +  G+      +KT  H ++ V  G  
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG-HFESDVCVGCS 207

Query: 445 LIGIYSKCQRN-ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           LI ++ K + + E A +VF ++ EL++V W  MI          EA  FF  M  +    
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC---GDIYGAR 560
            +F+ ++V S+CA+L +   G+Q+H+   + G V+D  V  +L++MY KC   G +   R
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCR 325

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQN-GYGDEAVRLYKDMIASG-VKPDDITFVAILTACSH 618
           + FD M   + ++W  +I GY +N     EA+ L+ +MI  G V+P+  TF +   AC +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385

Query: 619 SGLVDVGVEIF 629
                VG ++ 
Sbjct: 386 LSDPRVGKQVL 396


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 202/665 (30%), Positives = 329/665 (49%), Gaps = 52/665 (7%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P      ++ +  ++  +V+HGRR H  V   G ++N  V   L+ +YA+CG    A  V
Sbjct: 2   PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           FE +   +   +T M+    +      AL MF  M  + V    V+  ++L  CA     
Sbjct: 62  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACA----- 116

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                 +    K    +HGQ      ++ GFE D+ +  +L++MY K G +  A   F  
Sbjct: 117 ------STESLKDGMEIHGQ-----ILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKR 165

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT----------------- 340
           L  R VVSW  MIA   Q  Q   A  L +RM+  G  P+++T                 
Sbjct: 166 LEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEG 225

Query: 341 -------SINMLVACVR-----------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                  S  ++ + VR           +G +   R +F+ M    V +WN +++ Y Q+
Sbjct: 226 KFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQN 285

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
           EN  EA++LF  +Q  GVK +  T  ++L+   ++  L  GK +H    +     D  VA
Sbjct: 286 ENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVA 345

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + L+ +Y +C+    A ++F  +   D++ W  M    + N    EA   F++M+     
Sbjct: 346 TALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRR 405

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           PT  +   VL +CA L++  +GRQ+H+ I ++ +  ++ V +ALI MY KCG +  A   
Sbjct: 406 PTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSV 465

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F+ M  ++ + WN M+  YAQ+GY DE ++L+  M   GVK D ++FV++L+A SHSG V
Sbjct: 466 FEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSV 525

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA-EMLIDEMPCKDDPVIWEVLL 681
             G + F +M  D  + P  + Y C++D LGRAG   EA ++++    C  D ++W  LL
Sbjct: 526 TDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLL 585

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
            +CR H     AK AAE++   DP +S  Y +L+N+Y++ G WD +  +R+LM    + K
Sbjct: 586 GACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKK 645

Query: 742 DPAYS 746
           +P  S
Sbjct: 646 EPGRS 650



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/645 (23%), Positives = 281/645 (43%), Gaps = 114/645 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H+   G   +  +C  LI++Y++C +   AQ +F+ +  KD             
Sbjct: 23  GRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKD------------- 69

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             V +W  +I    + G  ++AL ++ +M  E  +PT +T  ++
Sbjct: 70  ------------------VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAI 111

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  +   ++ G   HG +++ G + +++V  AL+++Y KCG  + A   F+ +   + 
Sbjct: 112 LNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDV 171

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TAM++   + D+   A  ++R M    V  + ++L +V             D    S
Sbjct: 172 VSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYG--------DPNYLS 223

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           + KF        V+ L      E+D+ + NS ++M+   G +  A  +F ++ +R VV+W
Sbjct: 224 EGKF--------VYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTW 275

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
           N++I  Y Q     +A+ L  R++  G + +++T + ML        +  G+        
Sbjct: 276 NIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 335

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                      ++F  M S  V +W  M  +Y+Q+   KEA++L
Sbjct: 336 AGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQL 395

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+EMQ  G +P   TL  +L +CA +  L+ G+Q+H+  ++    ++  V + LI +Y K
Sbjct: 396 FQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGK 455

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C +   A  VF ++ + DI+ WNSM+   + +    E    F QM+ + +     SF +V
Sbjct: 456 CGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSV 515

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS+ +   S   G Q    + +D      F  +   E+Y    D+ G             
Sbjct: 516 LSALSHSGSVTDGYQYFVAMLQD------FSITPTPELYGCVVDLLG------------- 556

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
                      + G   EAV +   +  SG  PD I ++ +L AC
Sbjct: 557 -----------RAGRIQEAVDIVLKL--SGCLPDGILWMTLLGAC 588



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 177/375 (47%), Gaps = 24/375 (6%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A +LF++M +R+VV+WN +I+  V+N    +A+ ++ ++  +G     IT   +    T+
Sbjct: 260 ARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTS 319

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           L  +  G+  H LV + G D++  VA AL+SLY +C     A  +F +M   + +T+T M
Sbjct: 320 LTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVM 379

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
               A+     EAL++F+ M  +     S +L +VL  CA                  + 
Sbjct: 380 CVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH----------------LAA 423

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G+Q+H   I+  F  ++ +  +L++MY K G M  A  +F  + +R ++ WN M+  
Sbjct: 424 LQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGA 483

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-----PSP 367
           Y Q     + ++L  +M+  G + D V+ +++L A   SG +  G + F +M      +P
Sbjct: 484 YAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITP 543

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +   +  ++    ++   +EA+ +   ++  G  PD      +L +C      +  K   
Sbjct: 544 TPELYGCVVDLLGRAGRIQEAVDIV--LKLSGCLPDGILWMTLLGACRTHNKTDQAKAAA 601

Query: 428 AASL-KTASHIDNYV 441
              L +  SH   YV
Sbjct: 602 EQVLERDPSHSGAYV 616



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 164/348 (47%), Gaps = 13/348 (3%)

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           KPD      +L  C++   ++ G++VH          +N V   LI +Y++C     A++
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           VF  +   D+  W  MI G+     D + A   F QM++ ++ PT+ ++  +L++CA   
Sbjct: 61  VFEILERKDVFAWTRMI-GIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 119

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S   G ++H QI + G+  D+FVG+ALI MY KCG + GA   F  +  ++ V+W  MI 
Sbjct: 120 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 179

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV- 638
              Q+     A  LY+ M   GV P+ IT   +  A      +  G  ++    +  GV 
Sbjct: 180 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYG--LVSSGVM 237

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN----VRLAK 694
           E  +      ++  G AG   +A  L ++M    D V W ++++    + N    VRL  
Sbjct: 238 ESDVRVMNSAVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITLYVQNENFGEAVRLFG 296

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           R  ++  +    N   + L+ N+Y+SL      + + EL+ E    +D
Sbjct: 297 RLQQDGVK---ANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRD 341


>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 195/625 (31%), Positives = 314/625 (50%), Gaps = 52/625 (8%)

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKA 216
           AN  L +  K    K A  +F+++ + +EV++T ++SG   +    EAL +F ++ ++  
Sbjct: 52  ANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSE 111

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           + ID   LS  L  C   G G+               ++G  +H  ++K G    + + +
Sbjct: 112 LRIDPFLLSLGLKTC---GLGLNY-------------LYGTNLHGFSVKXGLVNSVFVGS 155

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +LLDMY K G++  +  +F  +P R+ V+W  +I G  +   S   +     M     E 
Sbjct: 156 ALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEY 215

Query: 337 DEVTSINMLVACVRSGDIKTGREM-----------------------------------F 361
           D       L A   SG +  GR +                                   F
Sbjct: 216 DSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTF 275

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
             M +  V SW  ++++Y Q       ++ F+ M+   V P+  T + ++S CA    L+
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G+Q+HA  L         VA+ ++ +YSKC       +VF  +   DI+ W+++IA  S
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
                 EAF +  +MR     P +F+ A+VLS C  ++   QG+Q+HA +   G      
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           V SALI MY KCG I  A + F      + ++W  MI GYA++G+  EA+ L++++   G
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVG 515

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           ++PD +TF+ +LTACSH+G+VD+G   FNSM  D+ + P  +HY CMID L RAG  H+A
Sbjct: 516 LRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDA 575

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           E LI  MP + D V+W  LL +CR+H +V   +RAA E+ +LDP  +  +  LANI+++ 
Sbjct: 576 ETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAK 635

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           G+W +   +R LM    +VK+P +S
Sbjct: 636 GKWKEAANIRMLMKSKGVVKEPGWS 660



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 156/584 (26%), Positives = 267/584 (45%), Gaps = 60/584 (10%)

Query: 32  LYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
           LY+K  +     H  +K+   D+   N  L    K++ L+ A  LFD++P+R+ VSW N+
Sbjct: 30  LYTKPLSLTLNAHFSNKV---DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNI 86

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL-LDVEHGRRCHGLVIKIG 150
           IS  V +    +AL +++KM  +  +     L S+   +  L L+  +G   HG  +K G
Sbjct: 87  ISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXG 146

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           L  +++V +ALL +Y K G    +  VF+EM   N VT+TA+++GL +       L  F 
Sbjct: 147 LVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFS 206

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            M R  V  DS + +  L   A  G               + N HG+ +H  T+K GF+ 
Sbjct: 207 GMGRSKVEYDSYAYAIALKASADSG---------------ALN-HGRSIHTQTLKKGFDE 250

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           +  ++NSL  MY K G +D     F  +    VVSW  ++  Y Q  +    ++  +RM+
Sbjct: 251 NSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMR 310

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREM------------------------------ 360
           +    P+E T   ++  C     +K G ++                              
Sbjct: 311 ASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELA 370

Query: 361 -----FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
                F SM    + +W+ ++++YSQ    +EA +    M+  G KP+   LA +LS C 
Sbjct: 371 SVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCG 430

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
           +M ILE GKQ+HA  L       + V S LI +Y+KC     A ++F    + DI+ W +
Sbjct: 431 SMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTA 490

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MI+G + +    EA   F+ +++  + P   +F  VL++C+       G      + KD 
Sbjct: 491 MISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDY 550

Query: 536 YVNDIFVG-SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           ++         +I++ C+ G ++ A      M     + W++++
Sbjct: 551 HITPSKEHYGCMIDLLCRAGRLHDAETLIRSM----PIQWDDVV 590



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 219/464 (47%), Gaps = 59/464 (12%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           ++  +A+L    K  ++  + K+FDEMP RN V+W  +I+ LVR G  E  L+ ++ M  
Sbjct: 151 VFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGR 210

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
                     A   KAS     + HGR  H   +K G D+N +VAN+L ++Y KCG   +
Sbjct: 211 SKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDY 270

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
            +  F +M   + V++T +++   +  +    L+ F+ M    V  +  + S+V+  CA 
Sbjct: 271 GLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCA- 329

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
                           F+R   G+Q+H   + +GF   L ++NS++ +Y+K G++ S   
Sbjct: 330 ---------------NFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSK 374

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----- 348
           +F ++  R +++W+ +IA Y Q     +A E L RM+S G +P+E    ++L  C     
Sbjct: 375 VFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAI 434

Query: 349 ------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
                                          + G I    ++F       + SW AM+S 
Sbjct: 435 LEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISG 494

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI- 437
           Y++  + +EAI+LF  +Q  G++PD  T   +L++C+  G+++ G   +  S+    HI 
Sbjct: 495 YAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLG-FYYFNSMSKDYHIT 553

Query: 438 ---DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMI 477
              ++Y    +I +  +  R   AE +   +P + D V W++++
Sbjct: 554 PSKEHY--GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLL 595



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 191/431 (44%), Gaps = 55/431 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   L+ G  +++F+ N L  +Y+KC       H F KM   D             
Sbjct: 236 GRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLD------------- 282

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             VVSW  +++A ++ G E+  L  + +M     +P   T ++V
Sbjct: 283 ------------------VVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAV 324

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                    ++ G + H  V+ +G    + VAN++++LY+KCG       VF  M   + 
Sbjct: 325 ISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDI 384

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T++ +++  ++     EA E    M  +    +  +L+SVL VC          +  Q 
Sbjct: 385 ITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMA------ILEQ- 437

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+Q+H   + +G E    + ++L+ MYAK G +  A  IF +  +  ++SW
Sbjct: 438 ---------GKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISW 488

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             MI+GY +   S +AIEL + ++  G  PD VT I +L AC  +G +  G   F+SM  
Sbjct: 489 TAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSK 548

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               +PS   +  M+    ++    +A  L R M    ++ D    + +L +C   G ++
Sbjct: 549 DYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMP---IQWDDVVWSTLLRACRIHGDVD 605

Query: 422 SGKQVHAASLK 432
            G++  A  LK
Sbjct: 606 CGQRAAAEVLK 616


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 198/663 (29%), Positives = 330/663 (49%), Gaps = 59/663 (8%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T    FK ST+   + H  + H  +I  G   +I +   L    +  G   +A  +F  +
Sbjct: 22  TYLDFFKRSTS---ISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
             P+   F  +M G +  +    +L +F   +RK+  +   S +    + A  G      
Sbjct: 79  QRPDVFLFNVLMRGFSVNESPHSSLSVFA-HLRKSTDLKPNSSTYAFAISAASGF----- 132

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                D++  R +HGQ V       G +++L L ++++ MY K   ++ A  +F  +PE+
Sbjct: 133 ----RDDRAGRVIHGQAV-----VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK 183

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM--KSCGFEPDEVTSINMLVACV---------- 349
             + WN MI+GY +     ++I++ + +  +SC    D  T +++L A            
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVFRDLINESCT-RLDTTTLLDILPAVAELQELRLGMQ 242

Query: 350 -------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                    + G IK G  +F     P + ++NAM+  Y+ +  
Sbjct: 243 IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE 302

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            + ++ LF+E+   G +   +TL  ++     + ++ +   +H   LK+       V++ 
Sbjct: 303 TELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTA 359

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           L  +YSK    E A ++F   PE  +  WN+MI+G + N L  +A   F++M+++E  P 
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
             +   +LS+CA+L +   G+ VH  +    + + I+V +ALI MY KCG I  AR+ FD
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
           +M  KN VTWN MI GY  +G G EA+ ++ +M+ SG+ P  +TF+ +L ACSH+GLV  
Sbjct: 480 LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKE 539

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G EIFNSM   +G EP + HY CM+D LGRAGH   A   I+ M  +    +WE LL +C
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC 599

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           R+H +  LA+  +E+LF LDP N   + LL+NI+S+   +     VR+   +  + K P 
Sbjct: 600 RIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659

Query: 745 YSL 747
           Y+L
Sbjct: 660 YTL 662



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 142/591 (24%), Positives = 264/591 (44%), Gaps = 82/591 (13%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           HA I+ +G  +D  L  +L +  S     + A+ +F  +   D++ +N ++         
Sbjct: 40  HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRG------- 92

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKA 129
            F+    +E P                      +LSV+  +  +    P   T A    A
Sbjct: 93  -FS---VNESPH--------------------SSLSVFAHLRKSTDLKPNSSTYAFAISA 128

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
           ++   D   GR  HG  +  G D  + + + ++ +Y K    + A  VF+ M E + + +
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVS-IDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
             M+SG  K +  VE++++FR +I ++ + +D+ +L  +L   A                
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA---------------- 232

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
           +      G Q+H L  K G  +  ++    + +Y+K G +     +F    +  +V++N 
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-------------CVRS---- 351
           MI GY    ++  ++ L + +   G      T ++++               C++S    
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLS 352

Query: 352 ---------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                           +I++ R++FD  P  S+ SWNAM+S Y+Q+   ++AI LFREMQ
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
                P+  T+  ILS+CA +G L  GK VH     T      YV++ LIG+Y+KC    
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIA 472

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A R+F  + + + V WN+MI+G  L+    EA   F +M  + + PT  +F  VL +C+
Sbjct: 473 EARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACS 532

Query: 517 KLSSSFQGRQV-HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
                 +G ++ ++ I + G+   +   + ++++  + G +  A QF + M
Sbjct: 533 HAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 176/365 (48%), Gaps = 27/365 (7%)

Query: 55  YSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
           Y     +S   K   ++    LF E  + ++V++N +I     NG  E +LS++ ++   
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G      TL S+   S  L+ +      HG  +K     +  V+ AL ++Y+K    + A
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             +F+E  E +  ++ AM+SG  +     +A+ +FR M +   S + V+++ +L  CA+ 
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
           G        A S         G+ VH L     FE+ +++S +L+ MYAK G +  A  +
Sbjct: 434 G--------ALS--------LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  + +++ V+WN MI+GYG   Q  +A+ +   M + G  P  VT + +L AC  +G +
Sbjct: 478 FDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLV 537

Query: 355 KTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           K G E+F+SM       PSV  +  M+    ++ + + A++    M    ++P  +    
Sbjct: 538 KEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMS---IEPGSSVWET 594

Query: 410 ILSSC 414
           +L +C
Sbjct: 595 LLGAC 599



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 124/282 (43%), Gaps = 46/282 (16%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H + L++       +   L  +YSK N   SA+ LFD+ P K + SWNA++        
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI-------- 392

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                                  S   +NGL E A+S++ +M    F P  +T+  +  A
Sbjct: 393 -----------------------SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              L  +  G+  H LV     + +IYV+ AL+ +YAKCG    A  +F+ M++ NEVT+
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             M+SG     +  EAL +F  M+   ++   V+   VL  C+  G      +  + D  
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAG------LVKEGDEI 543

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           F+  +H         + GFE  +     ++D+  + G +  A
Sbjct: 544 FNSMIH---------RYGFEPSVKHYACMVDILGRAGHLQRA 576



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 2/142 (1%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           IY   A++    K   +  A +LFD M ++N V+WN +IS    +G  ++AL+++ +M N
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514

Query: 114 EGFVPTHITLASVFKA-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            G  PT +T   V  A S A L  E     + ++ + G + ++     ++ +  + G  +
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574

Query: 173 HAVPVFEEMS-EPNEVTFTAMM 193
            A+   E MS EP    +  ++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLL 596


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 225/741 (30%), Positives = 346/741 (46%), Gaps = 117/741 (15%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE-E 180
            LA   ++  +   +   R  HG ++ +GL   +++ N LL  Y  CG    A  +   +
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65

Query: 181 MSEPNEVTFTAMMSGLAK-------------------------------TDRVVEALEMF 209
           + EPN +T   MM+G AK                                 R ++ LE F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 210 RLMIRKAVSI-DSVSLSSVLGVCAREGCGVES----DVFAQSDNKFSRNVHGQQVHCLTI 264
             M R   S+ ++ +   V+  C   GC   +     +F + D     +V    V  + +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVD-MFV 184

Query: 265 KLGF------------EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
           + G+               +   NS+L  YAK   +D A   F ++ ER VVSWN+MIA 
Sbjct: 185 RCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAA 244

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR---------------------- 350
             Q  +  +A+ L+  M   G   D  T  + L AC R                      
Sbjct: 245 LSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID 304

Query: 351 -------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                         G  K  + +F+S+   +  SW  ++    Q E   ++++LF +M+ 
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
             +  D+  LA ++S C     L  G+Q+H+  LK+  +    V++ LI +Y+KC   + 
Sbjct: 365 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 424

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM--------------------- 496
           AE VF  + E DIV W SMI   S     I+A  FF  M                     
Sbjct: 425 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAE 484

Query: 497 -----------RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
                       Q ++ P   ++ T+   CA + ++  G Q+     K G + ++ V +A
Sbjct: 485 EDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANA 544

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
            I MY KCG I  A++ FD+++GK+ V+WN MI GY+Q+G G +A + + DM++ G KPD
Sbjct: 545 AITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPD 604

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            I++VA+L+ CSHSGLV  G   F+ M   HG+ P L+H++CM+D LGRAGH  EA+ LI
Sbjct: 605 YISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLI 664

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
           D+MP K    +W  LLS+C++H N  LA+ AA+ +F LD  +S  Y LLA IYS  G+ D
Sbjct: 665 DKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSD 724

Query: 726 DLRAVRELMSENCIVKDPAYS 746
           D   VR+LM +  I K+P YS
Sbjct: 725 DSAQVRKLMRDKGIKKNPGYS 745



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 168/617 (27%), Positives = 292/617 (47%), Gaps = 62/617 (10%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSW 88
           L++++ +C     A  LF ++    I+  N++L+   K   ++ A + F++M ER+VVSW
Sbjct: 179 LVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSW 238

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           N +I+AL ++G   +AL +  +M  +G      T  S   A   L  +  G++ H  VI+
Sbjct: 239 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 298

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
                + YVA+AL+ LYAKCG  K A  VF  + + N V++T ++ G  + +   +++E+
Sbjct: 299 SLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVEL 358

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
           F  M  + ++ID  +L++++      GC    D+             G+Q+H L +K G 
Sbjct: 359 FNQMRAELMAIDQFALATLI-----SGCFNRMDL-----------CLGRQLHSLCLKSGH 402

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
              + +SNSL+ +YAK GD+ +AE +FS++ ER +VSW  MI  Y Q             
Sbjct: 403 NRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQ------------- 449

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                  G+I   RE FD M + +  +WNAML +Y Q    ++ 
Sbjct: 450 ----------------------IGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDG 487

Query: 389 IKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           +K++  M   + V PD  T   +   CA +G  + G Q+   ++K    ++  VA+  I 
Sbjct: 488 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAIT 547

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +YSKC R   A+++F  +   D+V WN+MI G S + +  +A   F  M      P   S
Sbjct: 548 MYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYIS 607

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG----SALIEMYCKCGDIYGARQFF 563
           +  VLS C+      +G+     + +   V+ I  G    S ++++  + G +  A+   
Sbjct: 608 YVAVLSGCSHSGLVQEGKLYFDMMTR---VHGISPGLEHFSCMVDLLGRAGHLTEAKDLI 664

Query: 564 DMMHGKNTV-TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           D M  K T   W  ++     +G  DE   L    +     PD  +++ +    S +G  
Sbjct: 665 DKMPMKPTAEVWGALLSACKIHG-NDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKS 723

Query: 623 DVGVEIFNSMQLDHGVE 639
           D   ++   M+ D G++
Sbjct: 724 DDSAQVRKLMR-DKGIK 739



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 206/433 (47%), Gaps = 55/433 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA ++R+    D ++ + LIELY+KC +   A+ +F+ +  ++  SW  ++    +
Sbjct: 289 GKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 348

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  Y+ F                         K++ ++N+M  E        LA++
Sbjct: 349 -------YECF------------------------SKSVELFNQMRAELMAIDQFALATL 377

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                  +D+  GR+ H L +K G ++ I V+N+L+SLYAKCG  ++A  VF  MSE + 
Sbjct: 378 ISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDI 437

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           V++T+M++  ++   +++A E F  M  R A++ +++  + +      +G  + S + +Q
Sbjct: 438 VSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 497

Query: 246 SD---------------NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
            D                    N  G Q+   T+K G   ++ ++N+ + MY+K G +  
Sbjct: 498 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 557

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A+ +F  L  + VVSWN MI GY Q     +A +    M S G +PD ++ + +L  C  
Sbjct: 558 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 617

Query: 351 SGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           SG ++ G+  FD M      SP +  ++ M+    ++ +  EA  L  +M    +KP   
Sbjct: 618 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP---MKPTAE 674

Query: 406 TLAIILSSCAAMG 418
               +LS+C   G
Sbjct: 675 VWGALLSACKIHG 687



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 5/121 (4%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A+  G  +  H ++ GL  +  + N  I +YSKC     AQ LFD +  KD+ SWNA+++
Sbjct: 519 ANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 578

Query: 63  AQCKSDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFV 117
              +    + A K FD+M  +    + +S+  ++S    +GL ++    ++ M+   G  
Sbjct: 579 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGIS 638

Query: 118 P 118
           P
Sbjct: 639 P 639


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 225/741 (30%), Positives = 346/741 (46%), Gaps = 117/741 (15%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE-E 180
            LA   ++  +   +   R  HG ++ +GL   +++ N LL  Y  CG    A  +   +
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65

Query: 181 MSEPNEVTFTAMMSGLAK-------------------------------TDRVVEALEMF 209
           + EPN +T   MM+G AK                                 R ++ LE F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 210 RLMIRKAVSI-DSVSLSSVLGVCAREGCGVES----DVFAQSDNKFSRNVHGQQVHCLTI 264
             M R   S+ ++ +   V+  C   GC   +     +F + D     +V    V  + +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVD-MFV 184

Query: 265 KLGF------------EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
           + G+               +   NS+L  YAK   +D A   F ++ ER VVSWN+MIA 
Sbjct: 185 RCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAA 244

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR---------------------- 350
             Q  +  +A+ L+  M   G   D  T  + L AC R                      
Sbjct: 245 LSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID 304

Query: 351 -------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                         G  K  + +F+S+   +  SW  ++    Q E   ++++LF +M+ 
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
             +  D+  LA ++S C     L  G+Q+H+  LK+  +    V++ LI +Y+KC   + 
Sbjct: 365 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 424

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM--------------------- 496
           AE VF  + E DIV W SMI   S     I+A  FF  M                     
Sbjct: 425 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAE 484

Query: 497 -----------RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
                       Q ++ P   ++ T+   CA + ++  G Q+     K G + ++ V +A
Sbjct: 485 EDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANA 544

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
            I MY KCG I  A++ FD+++GK+ V+WN MI GY+Q+G G +A + + DM++ G KPD
Sbjct: 545 AITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPD 604

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            I++VA+L+ CSHSGLV  G   F+ M   HG+ P L+H++CM+D LGRAGH  EA+ LI
Sbjct: 605 YISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLI 664

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
           D+MP K    +W  LLS+C++H N  LA+ AA+ +F LD  +S  Y LLA IYS  G+ D
Sbjct: 665 DKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSD 724

Query: 726 DLRAVRELMSENCIVKDPAYS 746
           D   VR+LM +  I K+P YS
Sbjct: 725 DSAQVRKLMRDKGIKKNPGYS 745



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 168/617 (27%), Positives = 292/617 (47%), Gaps = 62/617 (10%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSW 88
           L++++ +C     A  LF ++    I+  N++L+   K   ++ A + F++M ER+VVSW
Sbjct: 179 LVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSW 238

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           N +I+AL ++G   +AL +  +M  +G      T  S   A   L  +  G++ H  VI+
Sbjct: 239 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 298

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
                + YVA+AL+ LYAKCG  K A  VF  + + N V++T ++ G  + +   +++E+
Sbjct: 299 SLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVEL 358

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
           F  M  + ++ID  +L++++      GC    D+             G+Q+H L +K G 
Sbjct: 359 FNQMRAELMAIDQFALATLI-----SGCFNRMDL-----------CLGRQLHSLCLKSGH 402

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
              + +SNSL+ +YAK GD+ +AE +FS++ ER +VSW  MI  Y Q             
Sbjct: 403 NRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQ------------- 449

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                  G+I   RE FD M + +  +WNAML +Y Q    ++ 
Sbjct: 450 ----------------------IGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDG 487

Query: 389 IKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           +K++  M   + V PD  T   +   CA +G  + G Q+   ++K    ++  VA+  I 
Sbjct: 488 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAIT 547

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +YSKC R   A+++F  +   D+V WN+MI G S + +  +A   F  M      P   S
Sbjct: 548 MYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYIS 607

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG----SALIEMYCKCGDIYGARQFF 563
           +  VLS C+      +G+     + +   V+ I  G    S ++++  + G +  A+   
Sbjct: 608 YVAVLSGCSHSGLVQEGKLYFDMMTR---VHGISPGLEHFSCMVDLLGRAGHLTEAKDLI 664

Query: 564 DMMHGKNTV-TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           D M  K T   W  ++     +G  DE   L    +     PD  +++ +    S +G  
Sbjct: 665 DKMPMKPTAEVWGALLSACKIHG-NDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKS 723

Query: 623 DVGVEIFNSMQLDHGVE 639
           D   ++   M+ D G++
Sbjct: 724 DDSAQVRKLMR-DKGIK 739



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 206/433 (47%), Gaps = 55/433 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA ++R+    D ++ + LIELY+KC +   A+ +F+ +  ++  SW  ++    +
Sbjct: 289 GKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 348

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  Y+ F                         K++ ++N+M  E        LA++
Sbjct: 349 -------YECF------------------------SKSVELFNQMRAELMAIDQFALATL 377

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                  +D+  GR+ H L +K G ++ I V+N+L+SLYAKCG  ++A  VF  MSE + 
Sbjct: 378 ISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDI 437

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           V++T+M++  ++   +++A E F  M  R A++ +++  + +      +G  + S + +Q
Sbjct: 438 VSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 497

Query: 246 SD---------------NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
            D                    N  G Q+   T+K G   ++ ++N+ + MY+K G +  
Sbjct: 498 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 557

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A+ +F  L  + VVSWN MI GY Q     +A +    M S G +PD ++ + +L  C  
Sbjct: 558 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 617

Query: 351 SGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           SG ++ G+  FD M      SP +  ++ M+    ++ +  EA  L  +M    +KP   
Sbjct: 618 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP---MKPTAE 674

Query: 406 TLAIILSSCAAMG 418
               +LS+C   G
Sbjct: 675 VWGALLSACKIHG 687



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 5/121 (4%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A+  G  +  H ++ GL  +  + N  I +YSKC     AQ LFD +  KD+ SWNA+++
Sbjct: 519 ANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 578

Query: 63  AQCKSDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFV 117
              +    + A K FD+M  +    + +S+  ++S    +GL ++    ++ M+   G  
Sbjct: 579 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGIS 638

Query: 118 P 118
           P
Sbjct: 639 P 639


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 183/557 (32%), Positives = 299/557 (53%), Gaps = 66/557 (11%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ +HC  +K G   DL   N LL+MY K+  +  A  +F  +PER+ +S+  +I GY +
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 316 KYQSTKAIELLQRMKSCGFE--PDEVTSINMLV-------------ACVRS--------- 351
             +  +AIEL  R+   G E  P   T+I  L+             AC+           
Sbjct: 117 SVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFV 176

Query: 352 -----------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                      G +   RE+FD +    + SW  M++ +++++  KEA+KLF +M+  G 
Sbjct: 177 GTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGF 236

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           KP+  T A +  +C  +   + GK VH  +LK+   +D YV   L+ +Y+K    + A R
Sbjct: 237 KPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARR 296

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
            F  IP+ D++ W+ MIA  + +    EA   F QMRQ  + P QF+FA+VL +CA +  
Sbjct: 297 AFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEG 356

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G Q+H  + K G  +D+FV +AL+++Y KCG +  + + F     +N VTWN +I G
Sbjct: 357 LNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVG 416

Query: 581 YAQNGYGDEAVRLYKDMI-------------------------------ASGVKPDDITF 609
           + Q G G++A+RL+ +M+                               +  VKPD +TF
Sbjct: 417 HVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTF 476

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           V +L+AC+++GL+D G   F SM  DHG+EP ++HYTCM+  LGR GH  +A  LIDE+P
Sbjct: 477 VGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIP 536

Query: 670 CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRA 729
            +   ++W  LL +C +H ++ L + +A+ +  ++P++ A + LL+N+Y++  RWD++ +
Sbjct: 537 FQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVAS 596

Query: 730 VRELMSENCIVKDPAYS 746
           VR+ M    + K+P  S
Sbjct: 597 VRKNMKRKGVKKEPGLS 613



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 132/527 (25%), Positives = 249/527 (47%), Gaps = 63/527 (11%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           G+  H  ++K G   +++  N LL++Y K  +   A  +F+EM E N ++F  ++ G A+
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
           + R +EA+E+F  + R+   ++    +++L +     CG                  G  
Sbjct: 117 SVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGEL----------------GWG 160

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +H    KLG E++  +  +L+D Y+  G +D A  +F  +  + +VSW  M+  + +   
Sbjct: 161 IHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDC 220

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVACV----------------------------- 349
             +A++L  +M+  GF+P+  T  ++  AC+                             
Sbjct: 221 FKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVA 280

Query: 350 ------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                 +SGDI   R  F+ +P   V  W+ M++ Y+QS+  KEA+++F +M+   V P+
Sbjct: 281 LLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPN 340

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
           + T A +L +CA M  L  G Q+H   +K   H D +V++ L+ +Y+KC R E +  +F 
Sbjct: 341 QFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFA 400

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
             P  + V WN++I G        +A   F  M +  +  T+ ++++ L +CA L++   
Sbjct: 401 ESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEP 460

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM---HGKNTVT--WNEMI 578
           G Q+H+   K   +   FVG  ++      G +   + +F  M   HG       +  M+
Sbjct: 461 GLQIHSLTVKPDKLT--FVG--VLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMV 516

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
               + G+ D+AV+L  ++     +P  + + A+L AC     +++G
Sbjct: 517 WLLGRGGHLDKAVKLIDEI---PFQPSVMVWRALLGACVIHNDIELG 560



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 200/416 (48%), Gaps = 53/416 (12%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+++WN +L+   KSD L  A KLFDEMPERN +S+  LI     +    +A+ ++ ++ 
Sbjct: 72  DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            EG         ++ K   +    E G   H  + K+G + N +V  AL+  Y+ CG   
Sbjct: 132 REGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVD 191

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF+ +   + V++T M++  A+ D   EAL++F  M       ++ + +SV   C 
Sbjct: 192 VAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACL 251

Query: 233 REGCGVES-DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
               G+E+ DV             G+ VH   +K  +E DL++  +LLD+Y K+GD+D A
Sbjct: 252 ----GLEAFDV-------------GKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDA 294

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--- 348
              F  +P++ V+ W+ MIA Y Q  QS +A+E+  +M+     P++ T  ++L AC   
Sbjct: 295 RRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATM 354

Query: 349 --------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                            + G ++   E+F   P  +  +WN ++
Sbjct: 355 EGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVI 414

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
             + Q  + ++A++LF  M    V+    T +  L +CA++  LE G Q+H+ ++K
Sbjct: 415 VGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVK 470



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 206/455 (45%), Gaps = 88/455 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA I + G   + F+   LI+ YS C     A+ +FD + +KD+            
Sbjct: 158 GWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDM------------ 205

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                              VSW  +++    N   ++AL ++++M   GF P + T ASV
Sbjct: 206 -------------------VSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASV 246

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           FKA   L   + G+  HG  +K   + ++YV  ALL LY K G    A   FEE+ + + 
Sbjct: 247 FKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDV 306

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-EGCGVESDVFAQ 245
           + ++ M++  A++D+  EA+EMF  M +  V  +  + +SVL  CA  EG  +       
Sbjct: 307 IPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNL------- 359

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G Q+HC  IK+G  +D+ +SN+L+D+YAK G M+++  +F+  P R+ V+
Sbjct: 360 ----------GNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVT 409

Query: 306 WNVMIAGYGQKYQSTKAIELLQRM----------------KSCG---------------F 334
           WN +I G+ Q     KA+ L   M                ++C                 
Sbjct: 410 WNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTV 469

Query: 335 EPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAI 389
           +PD++T + +L AC  +G +  G+  F SM       P +  +  M+    +  +  +A+
Sbjct: 470 KPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAV 529

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           KL  E+ F   +P       +L +C     +E G+
Sbjct: 530 KLIDEIPF---QPSVMVWRALLGACVIHNDIELGR 561



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 190/402 (47%), Gaps = 42/402 (10%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y   A+L    KS D++ A + F+E+P+++V+ W+ +I+   ++   ++A+ ++ +M 
Sbjct: 274 DLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
               +P   T ASV +A   +  +  G + H  VIKIGL  +++V+NAL+ +YAKCG  +
Sbjct: 334 QALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRME 393

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +++ +F E    N+VT+  ++ G  +     +AL +F  M+   V    V+ SS L  CA
Sbjct: 394 NSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACA 453

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                             +    G Q+H LT+K     D      +L   A  G +D  +
Sbjct: 454 ----------------SLAALEPGLQIHSLTVK----PDKLTFVGVLSACANAGLLDQGQ 493

Query: 293 VIFSNL-----PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
             F+++      E  +  +  M+   G+     KA++L+  +    F+P  +    +L A
Sbjct: 494 AYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIP---FQPSVMVWRALLGA 550

Query: 348 CVRSGDIKTGREMFDSM--PSPSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGVKPDR 404
           CV   DI+ GR     +    P   + + +LS+ Y+ ++       + + M+ +GVK + 
Sbjct: 551 CVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKE- 609

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
                       +  +ES   VH+ ++   SH +  V +G++
Sbjct: 610 ----------PGLSWIESQGTVHSFTVGDTSHPEVRVINGML 641



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 142/299 (47%), Gaps = 17/299 (5%)

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           L  C        GK +H   LK    +D +  + L+ +Y K      A ++F  +PE + 
Sbjct: 45  LQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNT 104

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           + + ++I G + +   +EA   F ++ +       F F T+L           G  +HA 
Sbjct: 105 ISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHAC 164

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           I K G+ ++ FVG+ALI+ Y  CG +  AR+ FD +  K+ V+W  M+  +A+N    EA
Sbjct: 165 IFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEA 224

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV----EPILDHY- 645
           ++L+  M   G KP++ TF ++  AC       +G+E F+  +  HG        LD Y 
Sbjct: 225 LKLFSQMRMVGFKPNNFTFASVFKAC-------LGLEAFDVGKSVHGCALKSRYELDLYV 277

Query: 646 -TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
              ++D   ++G   +A    +E+P K D + W  +++    +A    +K A E  F++
Sbjct: 278 GVALLDLYTKSGDIDDARRAFEEIP-KKDVIPWSFMIAR---YAQSDQSKEAVEMFFQM 332



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 44/237 (18%)

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF---SFATVLSSCAKLSSSFQGRQ 526
           +VC N+ +   S     +++    ++     + P++F   ++A  L  C +     +G+ 
Sbjct: 1   MVCRNNFLIQFSRRGFSVQSAKLTQEF-VGHVSPSEFNSHAYANALQDCIQKDEPSRGKG 59

Query: 527 VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           +H +I K G   D+F  + L+ MY K   +  A + FD M  +NT+++  +I GYA++  
Sbjct: 60  LHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVR 119

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILT---------------AC--------------- 616
             EA+ L+  +   G + +   F  IL                AC               
Sbjct: 120 FLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTA 179

Query: 617 -----SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
                S  G VDV  E+F+ +     V      +T M+ C      F EA  L  +M
Sbjct: 180 LIDAYSVCGRVDVAREVFDGILYKDMVS-----WTGMVTCFAENDCFKEALKLFSQM 231


>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 195/625 (31%), Positives = 314/625 (50%), Gaps = 52/625 (8%)

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKA 216
           AN  L +  K    K A  +F+++ + +EV++T ++SG   +    EAL +F ++ ++  
Sbjct: 52  ANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSE 111

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           + ID   LS  L  C   G G+               ++G  +H  ++K G    + + +
Sbjct: 112 LRIDPFLLSLGLKTC---GLGLNY-------------LYGTNLHGFSVKTGLVNSVFVGS 155

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +LLDMY K G++  +  +F  +P R+ V+W  +I G  +   S   +     M     E 
Sbjct: 156 ALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEY 215

Query: 337 DEVTSINMLVACVRSGDIKTGREM-----------------------------------F 361
           D       L A   SG +  GR +                                   F
Sbjct: 216 DSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTF 275

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
             M +  V SW  ++++Y Q       ++ F+ M+   V P+  T + ++S CA    L+
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G+Q+HA  L         VA+ ++ +YSKC       +VF  +   DI+ W+++IA  S
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
                 EAF +  +MR     P +F+ A+VLS C  ++   QG+Q+HA +   G      
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           V SALI MY KCG I  A + F      + ++W  MI GYA++G+  EA+ L++++   G
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVG 515

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           ++PD +TF+ +LTACSH+G+VD+G   FNSM  D+ + P  +HY CMID L RAG  H+A
Sbjct: 516 LRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDA 575

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           E LI  MP + D V+W  LL +CR+H +V   +RAA E+ +LDP  +  +  LANI+++ 
Sbjct: 576 ETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAK 635

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           G+W +   +R LM    +VK+P +S
Sbjct: 636 GKWKEAANIRMLMKSKGVVKEPGWS 660



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 156/584 (26%), Positives = 267/584 (45%), Gaps = 60/584 (10%)

Query: 32  LYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
           LY+K  +     H  +K+   D+   N  L    K++ L+ A  LFD++P+R+ VSW N+
Sbjct: 30  LYTKPLSLTLNAHFSNKV---DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNI 86

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL-LDVEHGRRCHGLVIKIG 150
           IS  V +    +AL +++KM  +  +     L S+   +  L L+  +G   HG  +K G
Sbjct: 87  ISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTG 146

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           L  +++V +ALL +Y K G    +  VF+EM   N VT+TA+++GL +       L  F 
Sbjct: 147 LVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFS 206

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            M R  V  DS + +  L   A  G               + N HG+ +H  T+K GF+ 
Sbjct: 207 GMGRSKVEYDSYAYAIALKASADSG---------------ALN-HGRSIHTQTLKKGFDE 250

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           +  ++NSL  MY K G +D     F  +    VVSW  ++  Y Q  +    ++  +RM+
Sbjct: 251 NSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMR 310

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREM------------------------------ 360
           +    P+E T   ++  C     +K G ++                              
Sbjct: 311 ASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELA 370

Query: 361 -----FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
                F SM    + +W+ ++++YSQ    +EA +    M+  G KP+   LA +LS C 
Sbjct: 371 SVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCG 430

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
           +M ILE GKQ+HA  L       + V S LI +Y+KC     A ++F    + DI+ W +
Sbjct: 431 SMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTA 490

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MI+G + +    EA   F+ +++  + P   +F  VL++C+       G      + KD 
Sbjct: 491 MISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDY 550

Query: 536 YVNDIFVG-SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           ++         +I++ C+ G ++ A      M     + W++++
Sbjct: 551 HITPSKEHYGCMIDLLCRAGRLHDAETLIRSM----PIQWDDVV 590



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 219/464 (47%), Gaps = 59/464 (12%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           ++  +A+L    K  ++  + K+FDEMP RN V+W  +I+ LVR G  E  L+ ++ M  
Sbjct: 151 VFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGR 210

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
                     A   KAS     + HGR  H   +K G D+N +VAN+L ++Y KCG   +
Sbjct: 211 SKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDY 270

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
            +  F +M   + V++T +++   +  +    L+ F+ M    V  +  + S+V+  CA 
Sbjct: 271 GLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCA- 329

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
                           F+R   G+Q+H   + +GF   L ++NS++ +Y+K G++ S   
Sbjct: 330 ---------------NFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSK 374

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----- 348
           +F ++  R +++W+ +IA Y Q     +A E L RM+S G +P+E    ++L  C     
Sbjct: 375 VFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAI 434

Query: 349 ------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
                                          + G I    ++F       + SW AM+S 
Sbjct: 435 LEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISG 494

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI- 437
           Y++  + +EAI+LF  +Q  G++PD  T   +L++C+  G+++ G   +  S+    HI 
Sbjct: 495 YAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLG-FYYFNSMSKDYHIT 553

Query: 438 ---DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMI 477
              ++Y    +I +  +  R   AE +   +P + D V W++++
Sbjct: 554 PSKEHY--GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLL 595



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 191/431 (44%), Gaps = 55/431 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   L+ G  +++F+ N L  +Y+KC       H F KM   D             
Sbjct: 236 GRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLD------------- 282

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             VVSW  +++A ++ G E+  L  + +M     +P   T ++V
Sbjct: 283 ------------------VVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAV 324

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                    ++ G + H  V+ +G    + VAN++++LY+KCG       VF  M   + 
Sbjct: 325 ISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDI 384

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T++ +++  ++     EA E    M  +    +  +L+SVL VC          +  Q 
Sbjct: 385 ITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMA------ILEQ- 437

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+Q+H   + +G E    + ++L+ MYAK G +  A  IF +  +  ++SW
Sbjct: 438 ---------GKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISW 488

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             MI+GY +   S +AIEL + ++  G  PD VT I +L AC  +G +  G   F+SM  
Sbjct: 489 TAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSK 548

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               +PS   +  M+    ++    +A  L R M    ++ D    + +L +C   G ++
Sbjct: 549 DYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMP---IQWDDVVWSTLLRACRIHGDVD 605

Query: 422 SGKQVHAASLK 432
            G++  A  LK
Sbjct: 606 CGQRAAAEVLK 616


>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
 gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
 gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 609

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 183/540 (33%), Positives = 292/540 (54%), Gaps = 42/540 (7%)

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG-DMDSAEVIFSNLPERSV 303
           Q+ NK    +HG Q H   +K G E D ++ NSLL +Y K G  M     +F     +  
Sbjct: 69  QTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDA 128

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----- 358
           +SW  M++GY    +  KA+E+   M S G + +E T  + + AC   G+++ GR     
Sbjct: 129 ISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGV 188

Query: 359 ------------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                          +FD MP P V  W A+LS++S+++ ++EA
Sbjct: 189 VITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEA 248

Query: 389 IKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           + LF  M + +G+ PD +T   +L++C  +  L+ GK++H   +      +  V S L+ 
Sbjct: 249 LGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLD 308

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y KC     A +VF+ + + + V W++++ G   N    +A   F++M + ++Y     
Sbjct: 309 MYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----C 364

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           F TVL +CA L++   G+++H Q  + G   ++ V SALI++Y K G I  A + +  M 
Sbjct: 365 FGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS 424

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            +N +TWN M+   AQNG G+EAV  + DM+  G+KPD I+F+AILTAC H+G+VD G  
Sbjct: 425 IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRN 484

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F  M   +G++P  +HY+CMID LGRAG F EAE L++   C++D  +W VLL  C  +
Sbjct: 485 YFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAAN 544

Query: 688 ANV-RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A+  R+A+R A+ +  L+PK    Y LL+N+Y ++GR  D   +R+LM    + K    S
Sbjct: 545 ADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQS 604



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 176/350 (50%), Gaps = 29/350 (8%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKAST 131
           A ++FDEMPE +V+ W  ++SA  +N L E+AL ++  M   +G VP   T  +V  A  
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
            L  ++ G+  HG +I  G+  N+ V ++LL +Y KCG  + A  VF  MS+ N V+++A
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           ++ G  +     +A+E+FR M  K    D     +VL  CA             +  +  
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACA-----------GLAAVRLG 381

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
           + +HGQ V     + G   ++ + ++L+D+Y K+G +DSA  ++S +  R++++WN M++
Sbjct: 382 KEIHGQYV-----RRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLS 436

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----S 366
              Q  +  +A+     M   G +PD ++ I +L AC  +G +  GR  F  M       
Sbjct: 437 ALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIK 496

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           P    ++ M+    ++   +EA  L    + R    D +   ++L  CAA
Sbjct: 497 PGTEHYSCMIDLLGRAGLFEEAENLLERAECRN---DASLWGVLLGPCAA 543



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 213/479 (44%), Gaps = 57/479 (11%)

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           I  L + G   +A+ + N   +     T    AS+ +    +    HG + H  V+K GL
Sbjct: 33  ILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGL 92

Query: 152 DKNIYVANALLSLYAKCG-WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           + +  V N+LLSLY K G   +    VF+     + +++T+MMSG       V+ALE+F 
Sbjct: 93  ETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFV 152

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            M+   +  +  +LSS +  C+  G           + +  R  HG     + I  GFE 
Sbjct: 153 EMVSFGLDANEFTLSSAVKACSELG-----------EVRLGRCFHG-----VVITHGFEW 196

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM- 329
           +  +S++L  +Y  N +   A  +F  +PE  V+ W  +++ + +     +A+ L   M 
Sbjct: 197 NHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMH 256

Query: 330 KSCGFEPDEVTSINMLVAC-----------------------------------VRSGDI 354
           +  G  PD  T   +L AC                                    + G +
Sbjct: 257 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +  R++F+ M   +  SW+A+L  Y Q+  H++AI++FREM+    + D      +L +C
Sbjct: 317 REARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKAC 372

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           A +  +  GK++H   ++     +  V S LI +Y K    + A RV+ ++   +++ WN
Sbjct: 373 AGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWN 432

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           +M++ L+ N    EA  FF  M +  + P   SF  +L++C       +GR     + K
Sbjct: 433 AMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK 491



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 204/457 (44%), Gaps = 86/457 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G   HAH++++GL  D  + N L+ LY K                             
Sbjct: 78  IHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLG--------------------------- 110

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                +    ++FD    ++ +SW +++S  V      KAL V+ +M + G      TL+
Sbjct: 111 ---PGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLS 167

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S  KA + L +V  GR  HG+VI  G + N ++++ L  LY        A  VF+EM EP
Sbjct: 168 SAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEP 227

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVF 243
           + + +TA++S  +K D   EAL +F  M R K +  D  +  +VL  C            
Sbjct: 228 DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG----------- 276

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                   R   G+++H   I  G  +++ + +SLLDMY K G +  A  +F+ + +++ 
Sbjct: 277 -----NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------- 349
           VSW+ ++ GY Q  +  KAIE+ + M+    E D      +L AC               
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQ 387

Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                +SG I +   ++  M   ++ +WNAMLS+ +Q+   +EA
Sbjct: 388 YVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEA 447

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           +  F +M  +G+KPD  +   IL++C   G+++ G+ 
Sbjct: 448 VSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRN 484



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 151/360 (41%), Gaps = 58/360 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++ NG+  +  + + L+++Y KC +   A+ +F+ M  K              
Sbjct: 284 GKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK-------------- 329

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                            N VSW+ L+    +NG  EKA+ ++ +M  +          +V
Sbjct: 330 -----------------NSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----CFGTV 368

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L  V  G+  HG  ++ G   N+ V +AL+ LY K G    A  V+ +MS  N 
Sbjct: 369 LKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNM 428

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T+ AM+S LA+  R  EA+  F  M++K +  D +S  ++L  C   G   E       
Sbjct: 429 ITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDE------- 481

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS- 305
                RN          IK G E   H S  ++D+  + G  + AE +      R+  S 
Sbjct: 482 ----GRNYFVLMAKSYGIKPGTE---HYS-CMIDLLGRAGLFEEAENLLERAECRNDASL 533

Query: 306 WNVMIAGYGQKYQSTKAIE-LLQRMKSCGFEPDEVTSI----NMLVACVRSGDIKTGREM 360
           W V++        +++  E + +RM     EP    S     NM  A  R GD    R++
Sbjct: 534 WGVLLGPCAANADASRVAERIAKRMME--LEPKYHMSYVLLSNMYKAIGRHGDALNIRKL 591



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 132/299 (44%), Gaps = 4/299 (1%)

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EAI++        +       A +L +C  +     G Q HA  +K+    D  V + L+
Sbjct: 44  EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103

Query: 447 GIYSKCQRN-ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
            +Y K         RVF      D + W SM++G       ++A   F +M    +   +
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE 163

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           F+ ++ + +C++L     GR  H  +   G+  + F+ S L  +Y    +   AR+ FD 
Sbjct: 164 FTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE 223

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVDV 624
           M   + + W  ++  +++N   +EA+ L+  M    G+ PD  TF  +LTAC +   +  
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           G EI   + + +G+   +   + ++D  G+ G   EA  + + M  K + V W  LL  
Sbjct: 284 GKEIHGKL-ITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGG 340


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 187/654 (28%), Positives = 339/654 (51%), Gaps = 60/654 (9%)

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           ++V   ++ H L++  G  +NI ++  L++LY   G    +   F+ + + N  ++ +++
Sbjct: 33  VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSII 92

Query: 194 SGLAKTDRVVEAL----EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           S   +  +  EA+    ++F +     +  D  +   +L  C                  
Sbjct: 93  SAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSL--------------- 137

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
               V G++VHC   K+GFE D+ ++ SL+ +Y++ G +D A  +F ++P + V SWN M
Sbjct: 138 ----VDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAM 193

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------ 357
           I+G+ Q   +  A+ +L RMK  G + D +T  ++L  C +S D+  G            
Sbjct: 194 ISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGL 253

Query: 358 -----------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                  + +FD M    + SWN+++++Y Q+ +   A++ F+ 
Sbjct: 254 DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKG 313

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQ 453
           MQ  G++PD  T+  + S  + +      + +    ++      D  + + L+ +Y+K  
Sbjct: 314 MQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLG 373

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQFSFATVL 512
               A  VF ++P  D + WN+++ G + N L  EA   +  M +  +  P Q ++ +++
Sbjct: 374 YMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSII 433

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
            + + + +  QG ++HA++ K+    D+FV + LI++Y KCG +  A   F  +    +V
Sbjct: 434 PAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSV 493

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
            WN +I     +G G+EA++L+KDM+A  VK D ITFV++L+ACSHSGLVD G + F+ M
Sbjct: 494 PWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIM 553

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
           Q ++G++P L HY CM+D LGRAG+  +A  L+  MP + D  IW  LLS+C+++ N  L
Sbjct: 554 QKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAEL 613

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
              A++ L  +D +N   Y LL+NIY++  +W+ +  VR L  +  + K P +S
Sbjct: 614 GTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWS 667



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 167/645 (25%), Positives = 304/645 (47%), Gaps = 109/645 (16%)

Query: 32  LYSKCNNTHSAQHL------FDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNV 85
           L++ C N ++ + L      F K   ++I     +++      D+  +   FD + ++N+
Sbjct: 28  LFNSCVNVNATKKLHALLLVFGK--SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNI 85

Query: 86  VSWNNLISALVRNGLEEKALSVYNK---MSNEGFV-PTHITLASVFKASTALLDVEHGRR 141
            SWN++ISA VR G   +A++  N+   M   G + P   T   + KA  +L+D   G++
Sbjct: 86  FSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKK 142

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
            H  V K+G + +++VA +L+ LY++ G    A  VF +M   +  ++ AM+SG  +   
Sbjct: 143 VHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGN 202

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
              AL +   M  + V +D+++++S+L VC            AQSD+     ++G  +H 
Sbjct: 203 AAGALGVLNRMKGEGVKMDTITVASILPVC------------AQSDDV----INGVLIHL 246

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
             +K G ++D+ +SN+L++MY+K G +  A+++F  +  R +VSWN +IA Y Q    + 
Sbjct: 247 HVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPST 306

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------------------- 360
           A+   + M+  G  PD +T +++     +  D +  R +                     
Sbjct: 307 ALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALV 366

Query: 361 ---------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM-QFRGVKPDR 404
                          FD +P     SWN +++ Y+Q+    EAI  +  M + R   P++
Sbjct: 367 NMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQ 426

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
            T   I+ + + +G L+ G ++HA  +K + ++D +VA+ LI +Y KC R E A  +F+ 
Sbjct: 427 GTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYE 486

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           IP    V WN++IA L ++    EA   FK M    +     +F ++LS+C+        
Sbjct: 487 IPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH------- 539

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI----YGARQFFDMMHGKNTVTWNEMIHG 580
                              S L++   KC DI    YG +    + H      +  M+  
Sbjct: 540 -------------------SGLVDEGQKCFDIMQKEYGIKP--SLKH------YGCMVDL 572

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
             + GY ++A  L ++M    ++PD   + A+L+AC   G  ++G
Sbjct: 573 LGRAGYLEKAYELVRNM---PIQPDASIWGALLSACKIYGNAELG 614



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 217/458 (47%), Gaps = 84/458 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK +H  + + G  DD F+   L+ LYS+                             
Sbjct: 138 VDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGV-------------------------- 171

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                L+ A+K+F +MP ++V SWN +IS   +NG    AL V N+M  EG     IT+A
Sbjct: 172 -----LDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+        DV +G   H  V+K GLD +++V+NAL+++Y+K G  + A  VF++M   
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR 286

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ ++++   + +    AL  F+ M    +  D +++ S+            + +F+
Sbjct: 287 DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL------------TSIFS 334

Query: 245 Q-SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
           Q SD + SR++ G  +     +   + D+ + N+L++MYAK G M+ A  +F  LP +  
Sbjct: 335 QLSDQRISRSILGFVIR----REWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDT 390

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSC-GFEPDEVTSINMLVACVRSGDIKTGRE--- 359
           +SWN ++ GY Q   +++AI+    M+ C    P++ T ++++ A    G ++ G +   
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450

Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                           +F  +P  +   WNA+++S       +E
Sbjct: 451 KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEE 510

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           A++LF++M    VK D  T   +LS+C+  G+++ G++
Sbjct: 511 ALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK 548



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 204/426 (47%), Gaps = 57/426 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G L+H H+L++GL  D F+ N LI +YSK      AQ +FD+M  +D+ SWN+I++A 
Sbjct: 239 INGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAY 298

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +++D   A + F  M                  G+    L+V             ++L 
Sbjct: 299 EQNNDPSTALRFFKGMQ---------------LGGIRPDLLTV-------------VSLT 330

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           S+F   + L D    R   G VI+   LDK++ + NAL+++YAK G+   A  VF+++  
Sbjct: 331 SIF---SQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPR 387

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI-DSVSLSSVLGVCAREGCGVESDV 242
            + +++  +++G  +     EA++ + +M     +I +  +  S++   +  G   +   
Sbjct: 388 KDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQ--- 444

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G ++H   IK     D+ ++  L+D+Y K G ++ A  +F  +P  +
Sbjct: 445 -------------GMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDT 491

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
            V WN +IA  G   +  +A++L + M +   + D +T +++L AC  SG +  G++ FD
Sbjct: 492 SVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFD 551

Query: 363 SMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
            M       PS+  +  M+    ++   ++A +L R M    ++PD +    +LS+C   
Sbjct: 552 IMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP---IQPDASIWGALLSACKIY 608

Query: 418 GILESG 423
           G  E G
Sbjct: 609 GNAELG 614



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 138/288 (47%), Gaps = 26/288 (9%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           KD+   NA+++   K   +  A+ +FD++P ++ +SWN L++   +NGL  +A+  YN M
Sbjct: 357 KDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMM 416

Query: 112 SN-EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
                 +P   T  S+  A + +  ++ G + H  +IK  L  +++VA  L+ LY KCG 
Sbjct: 417 EECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGR 476

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            + A+ +F E+     V + A+++ L    R  EAL++F+ M+ + V  D ++  S+L  
Sbjct: 477 LEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSA 536

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI---KLGFEADLHLSNSLLDMYAKNGD 287
           C+  G   E                GQ+  C  I   + G +  L     ++D+  + G 
Sbjct: 537 CSHSGLVDE----------------GQK--CFDIMQKEYGIKPSLKHYGCMVDLLGRAGY 578

Query: 288 MDSAEVIFSNLPERSVVS-WNVMIAG---YGQKYQSTKAIELLQRMKS 331
           ++ A  +  N+P +   S W  +++    YG     T A + L  + S
Sbjct: 579 LEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDS 626


>gi|302783925|ref|XP_002973735.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
 gi|300158773|gb|EFJ25395.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
          Length = 836

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 217/750 (28%), Positives = 362/750 (48%), Gaps = 96/750 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA+I  +    D  L   L+ +Y+KC +   A+ +FD M  K              
Sbjct: 143 GKKVHAYISASEFKWDISLQTSLVNMYAKCGSPADAKAVFDSMARK-------------- 188

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                            ++V+WN +  A V NG   K L    +M  +G  P   T AS+
Sbjct: 189 -----------------DIVTWNAMAGASVHNGQSHKLL---REMDLQGVKPNATTYASI 228

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            + S+ L      R     ++  G   ++ V NAL+++YAKCG  + A  VF  +   + 
Sbjct: 229 TRGSSTLTGC---RAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLERKDV 285

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           ++++ M+S   ++ R  EA+E++RLM    +V  ++V+   V+G C   GCG   DV   
Sbjct: 286 ISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACT--GCG---DV--- 337

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                   + G QVH   + LG E D+ + ++L+ MY K G ++ A+  F  + +R V+ 
Sbjct: 338 --------IRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLC 389

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------V 349
           WN M++ Y ++    + IE  + M     EP+ VT  N+L+AC                V
Sbjct: 390 WNFMLSAYSERGSPQQVIEAYEAMD---VEPNAVTYTNVLIACSAMEDLAQGQKVHSRIV 446

Query: 350 RSG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
            SG                    +K+  ++F++M    V  WN M+  Y   +   EA++
Sbjct: 447 SSGLETDMTMETALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALR 506

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           L+  M   GV+ +  T A  L +C+ +  +E+G +V A         D    + L+ +Y+
Sbjct: 507 LYARMHEAGVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYA 566

Query: 451 KCQRNELAERVF--HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
            C   E A+RVF   R    D+V W +MIA  +      EA   +K M   E+ P   ++
Sbjct: 567 ACGDLEAAKRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTY 626

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
            +VLS+C+ L +  +GR++H+++E      D+ V ++L+ MY +CG +  A   F  +H 
Sbjct: 627 TSVLSACSSLGNILEGRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHN 686

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           ++  +W  M+  +A +G+   A+ L ++M   GV PD +TF ++L ACSH G ++ G   
Sbjct: 687 RDVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEGSLERGWAS 746

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F SM +D+ VEP  DHY CM+D L RAG   EA  +I  +  + + + W +LL + R H+
Sbjct: 747 FVSMAVDYAVEPSKDHYLCMVDLLARAGRLAEAREVIQFVGLERESMGWMMLLGASRTHS 806

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
           N+ +   AA+ +   D     P  LL ++Y
Sbjct: 807 NLAMGVEAAQCVAPEDGLAMCP--LLCSVY 834



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 191/749 (25%), Positives = 343/749 (45%), Gaps = 131/749 (17%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           +L+A     G  D+ +  N LI+L+ K  NT  ++                         
Sbjct: 44  VLYARFTGTGYLDNVYFRNWLIQLHGKFGNTQKSR------------------------- 78

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
                 ++FD M ++NV SW+ +I A  +NG   +A  ++ +M +EG  P  +T   V  
Sbjct: 79  ------EVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERMESEGIRPNAVTCLHVLG 132

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           A +   ++  G++ H  +       +I +  +L+++YAKCG    A  VF+ M+  + VT
Sbjct: 133 ACSYQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKCGSPADAKAVFDSMARKDIVT 192

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL-GVCAREGC-GVESDVFAQS 246
           + AM           ++ ++ R M  + V  ++ + +S+  G     GC  +E  + A  
Sbjct: 193 WNAMAGASVHNG---QSHKLLREMDLQGVKPNATTYASITRGSSTLTGCRAMEQRLLAS- 248

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                               G+ + + + N+L+++YAK GD++ A  +F+ L  + V+SW
Sbjct: 249 --------------------GYMSHVPVQNALVNVYAKCGDLEGARKVFNRLERKDVISW 288

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSINMLVACVRSGDIKTG-------- 357
           + MI+ Y Q  + ++AIE+ + M+S    EP+ VT + ++ AC   GD+  G        
Sbjct: 289 STMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRLV 348

Query: 358 ---------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                      ++ FD +    V  WN MLS+YS+  + ++ I+
Sbjct: 349 SLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIE 408

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
            +  M    V+P+  T   +L +C+AM  L  G++VH+  + +    D  + + L+ +Y 
Sbjct: 409 AYEAMD---VEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSLYI 465

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC+  + A +VF  + + D++ WN M+ G   +  D EA   + +M +  +     +FA 
Sbjct: 466 KCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEAGVEANNVTFAN 525

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG-- 568
            L +C+K+     G +V A I   G+  D+   +AL+ MY  CGD+  A++ F    G  
Sbjct: 526 ALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAAKRVFGSRRGER 585

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           ++ V W  MI  YAQ G G+EA+ LYK M++  +KP+ +T+ ++L+ACS  G +  G +I
Sbjct: 586 RDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKI 645

Query: 629 FNSM-----QLDHGVEPIL-----------DHYTC--------------MIDCLGRAGHF 658
            + +     +LD  V+  L           D ++C              M+      GH 
Sbjct: 646 HSKLEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHS 705

Query: 659 HEAEMLIDEMP---CKDDPVIWEVLLSSC 684
             A  L+ EM       D V ++ +L +C
Sbjct: 706 ARALELVREMELCGVSPDAVTFQSVLHAC 734



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 200/456 (43%), Gaps = 87/456 (19%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G  +H  ++  GL  D  + + L+++Y KC +   A+  FD++  +D+  WN +LSA 
Sbjct: 338 IRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSA- 396

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                            ER               G  ++ +  Y  M  E   P  +T  
Sbjct: 397 ---------------YSER---------------GSPQQVIEAYEAMDVE---PNAVTYT 423

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +V  A +A+ D+  G++ H  ++  GL+ ++ +  ALLSLY KC   K A  VFE M + 
Sbjct: 424 NVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSLYIKCRSLKSACQVFEAMGKK 483

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + + +  MM G    D   EAL ++  M    V  ++V+ ++ L  C+            
Sbjct: 484 DVIPWNFMMVGYIDHDCDTEALRLYARMHEAGVEANNVTFANALKACS------------ 531

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL--PERS 302
               K      G +V  +    GFE D+    +LL+MYA  GD+++A+ +F +     R 
Sbjct: 532 ----KIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAAKRVFGSRRGERRD 587

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-- 360
           VV W  MIA Y Q  +  +A+ L + M S   +P+ VT  ++L AC   G+I  GR++  
Sbjct: 588 VVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHS 647

Query: 361 ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                            F  + +  V SW  M+++++   +   
Sbjct: 648 KLEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSAR 707

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           A++L REM+  GV PD  T   +L +C+  G LE G
Sbjct: 708 ALELVREMELCGVSPDAVTFQSVLHACSHEGSLERG 743



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 133/306 (43%), Gaps = 20/306 (6%)

Query: 385 HKEAIKLFREMQFRGVKPDRTTLA------IILSSCAAMGILESGKQVHAASLKTASHID 438
           H   ++  RE +  GV  DR  L        +L  C   G L+    V  A      ++D
Sbjct: 2   HCRKLRTLRESK-AGVPFDRGKLEQQQKCLTLLQQCQDSGELD----VLYARFTGTGYLD 56

Query: 439 N-YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           N Y  + LI ++ K    + +  VF  + + ++  W+ MI   + N    EAF+ F++M 
Sbjct: 57  NVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERME 116

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
              + P   +   VL +C+  +    G++VHA I    +  DI + ++L+ MY KCG   
Sbjct: 117 SEGIRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKCGSPA 176

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A+  FD M  K+ VTWN M      NG   ++ +L ++M   GVKP+  T+ +I    S
Sbjct: 177 DAKAVFDSMARKDIVTWNAMAGASVHNG---QSHKLLREMDLQGVKPNATTYASITRGSS 233

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
                  G        L  G    +     +++   + G    A  + + +  + D + W
Sbjct: 234 ----TLTGCRAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLE-RKDVISW 288

Query: 678 EVLLSS 683
             ++S+
Sbjct: 289 STMISA 294


>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
          Length = 806

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 234/780 (30%), Positives = 369/780 (47%), Gaps = 117/780 (15%)

Query: 6   AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            G+ +HA IL+NG F   + ++  +L+  Y+KC                           
Sbjct: 62  TGRQIHARILKNGEFYAKNEYIETKLVIFYAKC--------------------------- 94

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
               D  E A  LF ++  RNV SW  +I    R GL E AL  + +M  +   P +  +
Sbjct: 95  ----DAHEIAETLFSKLRVRNVFSWAAIIGVKCRVGLAEGALMGFVEMLKDEIFPDNFVV 150

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEEMS 182
            +V KA  AL     GR  HG V K GL  + ++VA++L  +Y KCG    A  VF+E+ 
Sbjct: 151 PNVCKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSLADMYGKCGVLDDARKVFDEIP 210

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           E N V + A+M G  +     EA+ +   M  + V    V++S+ L   A   CGV    
Sbjct: 211 ERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANM-CGVG--- 266

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+Q H + +  G E D  L  S+L+ Y K G ++ AE++F  +  + 
Sbjct: 267 ------------EGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKD 314

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-- 360
           VV+WN++I+GY Q+     AI + + M+    + D VT   ++ A  R+ + K G+E+  
Sbjct: 315 VVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQC 374

Query: 361 ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                            FDS     +  WN +L++Y++S    E
Sbjct: 375 YCIRHSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAYAESGLSGE 434

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A++LF EMQ   V P+  T  +I+ S    G ++  K++    L+  S       SG++ 
Sbjct: 435 ALRLFYEMQLESVPPNAITWNLIILSLFRNGQVDEAKEMF---LQMQS-------SGIV- 483

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
                             P L  V W +M+ GL  N    EA  + ++M+++ + P  FS
Sbjct: 484 ------------------PTL--VSWTTMMNGLVQNGCSEEAVHYLRKMQESGLRPNVFS 523

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDG-YVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
               LS+CA L+S   GR VH  I ++  + + + + +ALI+MY KCGDI  A + F   
Sbjct: 524 ITVALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCGDISKAEKVFKRK 583

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
                  +N MI  YA +G   EA+ LY+ +   G+KPD+ITF  +L+AC+H+G ++  +
Sbjct: 584 SYSELPLFNAMISAYALSGNVKEAIDLYRSLEDMGIKPDNITFTNVLSACNHAGDINQAI 643

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           EIF+ M   HG+EP L+HY  M+D L  AG   +A  L++EMP K D  + + LL +C  
Sbjct: 644 EIFSDMVSKHGMEPCLEHYGLMVDLLASAGETEKALRLMEEMPYKPDARMIQSLLVTCNE 703

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
                L    + +L   +P NS  Y  ++N Y+  G WD++  +RE+M +  + K P  S
Sbjct: 704 EHKTELVDYLSRQLLESEPDNSGNYVTISNAYAGEGSWDEVVKMREMMKDKGLKKKPGCS 763



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 168/337 (49%), Gaps = 16/337 (4%)

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +SS  ++   +EA+ L  EM FR V+        IL  C       +G+Q+HA  LK   
Sbjct: 16  VSSLCKNGEIREALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGRQIHARILKNGE 75

Query: 436 HI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               + Y+ + L+  Y+KC  +E+AE +F ++   ++  W ++I       L   A M F
Sbjct: 76  FYAKNEYIETKLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGVKCRVGLAEGALMGF 135

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND-IFVGSALIEMYCK 552
            +M ++E++P  F    V  +C  L  S  GR +H  + K G   D +FV S+L +MY K
Sbjct: 136 VEMLKDEIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSLADMYGK 195

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           CG +  AR+ FD +  +N V WN ++ GY QNG  +EA+RL  DM   GV+P  +T    
Sbjct: 196 CGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTC 255

Query: 613 LTACSHSGLVDVG-----VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           L+A ++   V  G     V + N +++D+ +   + ++ C      + G    AEM+ D 
Sbjct: 256 LSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYC------KVGLIEYAEMVFDR 309

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           M  K D V W +L+S       V  A R   +L RL+
Sbjct: 310 MIGK-DVVTWNLLISGYVQQGLVEDAIRMC-KLMRLE 344


>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
          Length = 950

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 201/623 (32%), Positives = 325/623 (52%), Gaps = 84/623 (13%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           ++++     ++    K G  + AV ++ +    +   FTAM++G    +   +AL +F  
Sbjct: 176 ERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHE 235

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EA 270
           M+   VS + ++L SV+  C   G   E D+                +  L +K    + 
Sbjct: 236 MLSCGVSPNEITLVSVIKACIGAG---EFDL-------------AMSIVGLAMKSNLLDK 279

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           +L + NSL+ +Y + GD D+A  +F  +  R VVSW  ++  Y +               
Sbjct: 280 NLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAEL-------------- 325

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                GD++  R + D MP  +  SW  +++ + Q  N KEA+ 
Sbjct: 326 ---------------------GDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVS 364

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           L+ +M   G +P+ +  + +L +CA++  L SG+++H  +LK A   + +V+S LI +Y 
Sbjct: 365 LYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYC 424

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-------------- 496
           KC++   A+ +F+ +P+ +IVCWNS+I+G S NS  +EA   FK+M              
Sbjct: 425 KCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISG 484

Query: 497 -RQNEMY----------------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
             QN  +                P + +F++VL +CA L S   G+ VHA+I K G    
Sbjct: 485 YAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKES 544

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           IFVG+AL +MY K GD+  +++ F  M  +N V W  MI G A+NG+ +E++ L++DMI+
Sbjct: 545 IFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMIS 604

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
           +G+ P++ TF+AIL ACSHSGLV+  +  F  MQ   G+ P   HYTCM+D L RAGH  
Sbjct: 605 AGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQ-ACGISPKAKHYTCMVDVLARAGHLA 663

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           EAE L+ ++  K +   W  LLS+C ++ N  + +RAA+ L  LD  N+A Y LL+N+Y+
Sbjct: 664 EAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYA 723

Query: 720 SLGRWDDLRAVRELMSENCIVKD 742
           S G+W D   +R LM    + KD
Sbjct: 724 SCGKWKDAAEMRILMKGINLKKD 746



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 250/525 (47%), Gaps = 83/525 (15%)

Query: 24  FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPER 83
           F  + ++  + K  +  SA+ LFD MP + + S+  ++ A  K   +  A +L+ + P  
Sbjct: 149 FAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLC 208

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           +V  +  +I+  V N L + AL V+++M + G  P  ITL SV KA     + +      
Sbjct: 209 SVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIV 268

Query: 144 GLVIKIG-LDKNIYVANALLSLYAKCG-------------------WT------------ 171
           GL +K   LDKN+ V N+L++LY + G                   WT            
Sbjct: 269 GLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDL 328

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
           + A  V +EM E NEV++  +++   +     EA+ ++  M+      +    SSVLG C
Sbjct: 329 EGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGAC 388

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A           +  D +  R +H Q     T+K+    ++ +S++L+DMY K   +  A
Sbjct: 389 A-----------SLQDLRSGRKIHNQ-----TLKMACSNNVFVSSALIDMYCKCKQLPDA 432

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
           ++IF +LP++++V WN +I+GY     ++K +E                           
Sbjct: 433 QMIFYSLPQKNIVCWNSLISGYS---NNSKMVE--------------------------- 462

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
                  E+F  MP+ +V+SWN+++S Y+Q+    +A+K F  M   G  P   T + +L
Sbjct: 463 -----AEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVL 517

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
            +CA++  LE GK VHA  +K       +V + L  +Y+K    + ++RVF+ +P+ + V
Sbjct: 518 LACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDV 577

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            W +MI GL+ N    E+ + F+ M    + P + +F  +L +C+
Sbjct: 578 AWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACS 622



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 160/328 (48%), Gaps = 20/328 (6%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ +H   L+    ++ F+ + LI++Y KC     AQ +F  +P K+I  WN+++S   
Sbjct: 396 SGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYS 455

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +  +  A +LF +MP RNV SWN++IS   +N     AL  ++ M   G  P  IT +S
Sbjct: 456 NNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSS 515

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A  +L  +E G+  H  +IK+G+ ++I+V  AL  +YAK G    +  VF EM + N
Sbjct: 516 VLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRN 575

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +V +TAM+ GLA+     E++ +F  MI   ++ +  +  ++L  C+  G  VE      
Sbjct: 576 DVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGL-VE------ 628

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV- 304
                    H      +    G          ++D+ A+ G +  AE +   +  +S   
Sbjct: 629 ---------HAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEAN 679

Query: 305 SWNVMIAG---YGQKYQSTKAIELLQRM 329
           SW  +++    Y  K    +A + LQ +
Sbjct: 680 SWAALLSACNIYRNKEMGERAAKRLQEL 707



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 32/186 (17%)

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK---------- 595
           ++  + K GDI  AR+ FD M  ++ V++  M+    + G   +AV LY+          
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213

Query: 596 ---------------------DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
                                +M++ GV P++IT V+++ AC  +G  D+ + I      
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMK 273

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
            + ++  L     +I    R G    A  + DEM  + D V W  LL       ++  A+
Sbjct: 274 SNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVR-DVVSWTALLDVYAELGDLEGAR 332

Query: 695 RAAEEL 700
           R  +E+
Sbjct: 333 RVLDEM 338


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 196/644 (30%), Positives = 330/644 (51%), Gaps = 60/644 (9%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D+E  R+ H   I      N+++ N ++  Y KCG    A   F+ ++  N+ ++ +M++
Sbjct: 39  DLESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLT 97

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
             A+      AL++++   R  +  + V  ++VLG CA      E               
Sbjct: 98  AYAQNGHYRAALDLYK---RMDLQPNPVVYTTVLGACASIKALEE--------------- 139

Query: 255 HGQQVHC-LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
            G+ +H  ++   G + D+ L NSLL MYAK G ++ A+ +F  +  RSV SWN MIA Y
Sbjct: 140 -GKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAY 198

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------------- 360
            Q     +AI L + M     EP   T  ++L AC   G +  GR++             
Sbjct: 199 AQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDL 255

Query: 361 ----------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                                 F  +P   V SW+AM++++++++   EAI+ + +MQ  
Sbjct: 256 SLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLE 315

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           GV+P+  T A +L +CA++G L +G+ VH   L     I     + L+ +Y+     + A
Sbjct: 316 GVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEA 375

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP-TQFSFATVLSSCAK 517
             +F +I   D   W  +I G S           +++M+     P T+  ++ V+S+CA 
Sbjct: 376 RSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACAS 435

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           L +    RQ H+ IE DG ++D  + ++L+ MY + G++  ARQ FD M  ++T+ W  +
Sbjct: 436 LGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTL 495

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I GYA++G    A+ LYK+M   G +P ++TF+ +L ACSH+GL + G ++F S+Q D+ 
Sbjct: 496 IAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYA 555

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           + P + HY+C+ID L RAG   +AE LI+ MP + + V W  LL + R+H +V+ A  AA
Sbjct: 556 MHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAA 615

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
            ++ +LDP + A Y LL+N+++  G    + +VR  M    + K
Sbjct: 616 GQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKK 659



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 156/616 (25%), Positives = 279/616 (45%), Gaps = 104/616 (16%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           + FL N ++  Y KC +  SA+  FD +  K+ YSW ++L+A  +               
Sbjct: 57  NVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQ--------------- 101

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
                           NG    AL +Y +M      P  +   +V  A  ++  +E G+ 
Sbjct: 102 ----------------NGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIKALEEGKA 142

Query: 142 CHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
            H  +    GL  ++ + N+LL++YAKCG  + A  +FE MS  +  ++ AM++  A++ 
Sbjct: 143 IHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSG 202

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              EA+ ++  M    V     + +SVL  C+  G      +  Q          G+++H
Sbjct: 203 HFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLG------LLDQ----------GRKIH 243

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            L    G E DL L N+LL MYA+   +D A  IF  LP R VVSW+ MIA + +     
Sbjct: 244 ALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFD 303

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG----------------------- 357
           +AIE   +M+  G  P+  T  ++L+AC   GD++ G                       
Sbjct: 304 EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALV 363

Query: 358 ------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ-FRGVKPDR 404
                       R +FD + +     W  ++  YS+  +    ++L+REM+    V   +
Sbjct: 364 DLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATK 423

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV-ASGLIGIYSKCQRNELAERVFH 463
              + ++S+CA++G     +Q H + ++    I ++V A+ L+ +YS+    E A +VF 
Sbjct: 424 IIYSCVISACASLGAFADARQAH-SDIEADGMISDFVLATSLVNMYSRWGNLESARQVFD 482

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
           ++   D + W ++IAG + +     A   +K+M      P++ +F  VL +C+      Q
Sbjct: 483 KMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQ 542

Query: 524 GRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGY 581
           G+Q+   I+ D  ++ +I   S +I++  + G +  A +  + M  + N VTW+ ++   
Sbjct: 543 GKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLG-- 600

Query: 582 AQNGYGDEAVRLYKDM 597
                   A R++KD+
Sbjct: 601 --------ASRIHKDV 608



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 112/243 (46%), Gaps = 10/243 (4%)

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
            K+ +    + +   +   L  C  L S    RQ+H +I      N +F+G+ ++  Y K
Sbjct: 15  LKEEKAGSRFDSSGHYRDALRQCQDLESV---RQIHDRISGAASAN-VFLGNEIVRAYGK 70

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           CG +  AR  FD +  KN  +W  M+  YAQNG+   A+ LYK M    ++P+ + +  +
Sbjct: 71  CGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTV 127

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L AC+    ++ G  I + +    G++  +     ++    + G   +A+ L + M  + 
Sbjct: 128 LGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRS 187

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
               W  ++++     +   A R  E++  ++P      S+L+   S+LG  D  R +  
Sbjct: 188 VSS-WNAMIAAYAQSGHFEEAIRLYEDM-DVEPSVRTFTSVLSAC-SNLGLLDQGRKIHA 244

Query: 733 LMS 735
           L+S
Sbjct: 245 LIS 247


>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 787

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 201/623 (32%), Positives = 325/623 (52%), Gaps = 84/623 (13%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           ++++     ++    K G  + AV ++ +    +   FTAM++G    +   +AL +F  
Sbjct: 176 ERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHE 235

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EA 270
           M+   VS + ++L SV+  C   G   E D+                +  L +K    + 
Sbjct: 236 MLSCGVSPNEITLVSVIKACIGAG---EFDL-------------AMSIVGLAMKSNLLDK 279

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           +L + NSL+ +Y + GD D+A  +F  +  R VVSW  ++  Y +               
Sbjct: 280 NLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAEL-------------- 325

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                GD++  R + D MP  +  SW  +++ + Q  N KEA+ 
Sbjct: 326 ---------------------GDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVS 364

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           L+ +M   G +P+ +  + +L +CA++  L SG+++H  +LK A   + +V+S LI +Y 
Sbjct: 365 LYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYC 424

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-------------- 496
           KC++   A+ +F+ +P+ +IVCWNS+I+G S NS  +EA   FK+M              
Sbjct: 425 KCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISG 484

Query: 497 -RQNEMY----------------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
             QN  +                P + +F++VL +CA L S   G+ VHA+I K G    
Sbjct: 485 YAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKES 544

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           IFVG+AL +MY K GD+  +++ F  M  +N V W  MI G A+NG+ +E++ L++DMI+
Sbjct: 545 IFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMIS 604

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
           +G+ P++ TF+AIL ACSHSGLV+  +  F  MQ   G+ P   HYTCM+D L RAGH  
Sbjct: 605 AGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQ-ACGISPKAKHYTCMVDVLARAGHLA 663

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           EAE L+ ++  K +   W  LLS+C ++ N  + +RAA+ L  LD  N+A Y LL+N+Y+
Sbjct: 664 EAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYA 723

Query: 720 SLGRWDDLRAVRELMSENCIVKD 742
           S G+W D   +R LM    + KD
Sbjct: 724 SCGKWKDAAEMRILMKGINLKKD 746



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 250/525 (47%), Gaps = 83/525 (15%)

Query: 24  FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPER 83
           F  + ++  + K  +  SA+ LFD MP + + S+  ++ A  K   +  A +L+ + P  
Sbjct: 149 FAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLC 208

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           +V  +  +I+  V N L + AL V+++M + G  P  ITL SV KA     + +      
Sbjct: 209 SVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIV 268

Query: 144 GLVIKIG-LDKNIYVANALLSLYAKCG-------------------WT------------ 171
           GL +K   LDKN+ V N+L++LY + G                   WT            
Sbjct: 269 GLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDL 328

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
           + A  V +EM E NEV++  +++   +     EA+ ++  M+      +    SSVLG C
Sbjct: 329 EGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGAC 388

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A           +  D +  R +H Q     T+K+    ++ +S++L+DMY K   +  A
Sbjct: 389 A-----------SLQDLRSGRKIHNQ-----TLKMACSNNVFVSSALIDMYCKCKQLPDA 432

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
           ++IF +LP++++V WN +I+GY     ++K +E                           
Sbjct: 433 QMIFYSLPQKNIVCWNSLISGYS---NNSKMVE--------------------------- 462

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
                  E+F  MP+ +V+SWN+++S Y+Q+    +A+K F  M   G  P   T + +L
Sbjct: 463 -----AEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVL 517

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
            +CA++  LE GK VHA  +K       +V + L  +Y+K    + ++RVF+ +P+ + V
Sbjct: 518 LACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDV 577

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            W +MI GL+ N    E+ + F+ M    + P + +F  +L +C+
Sbjct: 578 AWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACS 622



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 172/362 (47%), Gaps = 30/362 (8%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ +H   L+    ++ F+ + LI++Y KC     AQ +F  +P K+I  WN+++S   
Sbjct: 396 SGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYS 455

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +  +  A +LF +MP RNV SWN++IS   +N     AL  ++ M   G  P  IT +S
Sbjct: 456 NNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSS 515

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A  +L  +E G+  H  +IK+G+ ++I+V  AL  +YAK G    +  VF EM + N
Sbjct: 516 VLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRN 575

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +V +TAM+ GLA+     E++ +F  MI   ++ +  +  ++L  C+  G  VE      
Sbjct: 576 DVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGL-VE------ 628

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV- 304
                    H      +    G          ++D+ A+ G +  AE +   +  +S   
Sbjct: 629 ---------HAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEAN 679

Query: 305 SWNVMIAG---YGQKYQSTKAIELLQRM---KSCGFEPDEVTSINMLVACVRSGDIKTGR 358
           SW  +++    Y  K    +A + LQ +    + G+    V   NM  +C   G  K   
Sbjct: 680 SWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGY----VLLSNMYASC---GKWKDAA 732

Query: 359 EM 360
           EM
Sbjct: 733 EM 734



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 32/186 (17%)

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK---------- 595
           ++  + K GDI  AR+ FD M  ++ V++  M+    + G   +AV LY+          
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213

Query: 596 ---------------------DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
                                +M++ GV P++IT V+++ AC  +G  D+ + I      
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMK 273

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
            + ++  L     +I    R G    A  + DEM  + D V W  LL       ++  A+
Sbjct: 274 SNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVR-DVVSWTALLDVYAELGDLEGAR 332

Query: 695 RAAEEL 700
           R  +E+
Sbjct: 333 RVLDEM 338


>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
          Length = 950

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 202/628 (32%), Positives = 323/628 (51%), Gaps = 94/628 (14%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           ++++     ++    K G  + AV ++ +    +   FTAM++G    +   +AL +F  
Sbjct: 176 ERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHE 235

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDV------FAQSDNKFSRNVHGQQVHCLTIK 265
           M+   VS + ++L SV+  C   G   E D+       A   N   +N            
Sbjct: 236 MLSCGVSPNEITLVSVIKACIGAG---EFDLAMSIVGLAMKSNLLDKN------------ 280

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
                 L + NSL+ +Y + GD D+A  +F  +  R VVSW  ++  Y +          
Sbjct: 281 ------LGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAEL--------- 325

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                     GD++  R + D MP  +  SW  +++ + Q  N 
Sbjct: 326 --------------------------GDLEGARRVLDEMPERNEVSWGTLVARHEQKGNA 359

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           KEA+ L+ +M   G +P+ +  + +L +CA++  L SG+++H  +LK A   + +V+S L
Sbjct: 360 KEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSAL 419

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM--------- 496
           I +Y KC++   A+ +F+ +P+ +IVCWNS+I+G S NS  +EA   FK+M         
Sbjct: 420 IDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWN 479

Query: 497 ------RQNEMY----------------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
                  QN  +                P + +F++VL +CA L S   G+ VHA+I K 
Sbjct: 480 SIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKL 539

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G    IFVG+AL +MY K GD+  +++ F  M  +N V W  MI G A+NG+ +E++ L+
Sbjct: 540 GIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLF 599

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           +DMI++G+ P++ TF+AIL ACSHSGLV+  +  F  MQ   G+ P   HYTCM+D L R
Sbjct: 600 EDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQ-ACGISPKAKHYTCMVDVLAR 658

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           AGH  EAE L+ ++  K +   W  LLS+C ++ N  + +RAA+ L  LD  N+A Y LL
Sbjct: 659 AGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLL 718

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKD 742
           +N+Y+S G+W D   +R LM    + KD
Sbjct: 719 SNMYASCGKWKDAAEMRILMKGINLKKD 746



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 250/525 (47%), Gaps = 83/525 (15%)

Query: 24  FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPER 83
           F  + ++  + K  +  SA+ LFD MP + + S+  ++ A  K   +  A +L+ + P  
Sbjct: 149 FAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLC 208

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           +V  +  +I+  V N L + AL V+++M + G  P  ITL SV KA     + +      
Sbjct: 209 SVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIV 268

Query: 144 GLVIKIG-LDKNIYVANALLSLYAKCG-------------------WT------------ 171
           GL +K   LDKN+ V N+L++LY + G                   WT            
Sbjct: 269 GLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDL 328

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
           + A  V +EM E NEV++  +++   +     EA+ ++  M+      +    SSVLG C
Sbjct: 329 EGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGAC 388

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A           +  D +  R +H Q     T+K+    ++ +S++L+DMY K   +  A
Sbjct: 389 A-----------SLQDLRSGRKIHNQ-----TLKMACSNNVFVSSALIDMYCKCKQLPDA 432

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
           ++IF +LP++++V WN +I+GY     ++K +E                           
Sbjct: 433 QMIFYSLPQKNIVCWNSLISGYS---NNSKMVE--------------------------- 462

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
                  E+F  MP+ +V+SWN+++S Y+Q+    +A+K F  M   G  P   T + +L
Sbjct: 463 -----AEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVL 517

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
            +CA++  LE GK VHA  +K       +V + L  +Y+K    + ++RVF+ +P+ + V
Sbjct: 518 LACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDV 577

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            W +MI GL+ N    E+ + F+ M    + P + +F  +L +C+
Sbjct: 578 AWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACS 622



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 160/328 (48%), Gaps = 20/328 (6%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ +H   L+    ++ F+ + LI++Y KC     AQ +F  +P K+I  WN+++S   
Sbjct: 396 SGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYS 455

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +  +  A +LF +MP RNV SWN++IS   +N     AL  ++ M   G  P  IT +S
Sbjct: 456 NNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSS 515

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A  +L  +E G+  H  +IK+G+ ++I+V  AL  +YAK G    +  VF EM + N
Sbjct: 516 VLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRN 575

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +V +TAM+ GLA+     E++ +F  MI   ++ +  +  ++L  C+  G  VE      
Sbjct: 576 DVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGL-VE------ 628

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV- 304
                    H      +    G          ++D+ A+ G +  AE +   +  +S   
Sbjct: 629 ---------HAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEAN 679

Query: 305 SWNVMIAG---YGQKYQSTKAIELLQRM 329
           SW  +++    Y  K    +A + LQ +
Sbjct: 680 SWAALLSACNIYRNKEMGERAAKRLQEL 707



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 32/186 (17%)

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK---------- 595
           ++  + K GDI  AR+ FD M  ++ V++  M+    + G   +AV LY+          
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213

Query: 596 ---------------------DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
                                +M++ GV P++IT V+++ AC  +G  D+ + I      
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMK 273

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
            + ++  L     +I    R G    A  + DEM  + D V W  LL       ++  A+
Sbjct: 274 SNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVR-DVVSWTALLDVYAELGDLEGAR 332

Query: 695 RAAEEL 700
           R  +E+
Sbjct: 333 RVLDEM 338


>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
          Length = 888

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 201/623 (32%), Positives = 325/623 (52%), Gaps = 84/623 (13%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           ++++     ++    K G  + AV ++ +    +   FTAM++G    +   +AL +F  
Sbjct: 176 ERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHE 235

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EA 270
           M+   VS + ++L SV+  C   G   E D+                +  L +K    + 
Sbjct: 236 MLSCGVSPNEITLVSVIKACIGAG---EFDL-------------AMSIVGLAMKSNLLDK 279

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           +L + NSL+ +Y + GD D+A  +F  +  R VVSW  ++  Y +               
Sbjct: 280 NLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAEL-------------- 325

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                GD++  R + D MP  +  SW  +++ + Q  N KEA+ 
Sbjct: 326 ---------------------GDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVS 364

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           L+ +M   G +P+ +  + +L +CA++  L SG+++H  +LK A   + +V+S LI +Y 
Sbjct: 365 LYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYC 424

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-------------- 496
           KC++   A+ +F+ +P+ +IVCWNS+I+G S NS  +EA   FK+M              
Sbjct: 425 KCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISG 484

Query: 497 -RQNEMY----------------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
             QN  +                P + +F++VL +CA L S   G+ VHA+I K G    
Sbjct: 485 YAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKES 544

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           IFVG+AL +MY K GD+  +++ F  M  +N V W  MI G A+NG+ +E++ L++DMI+
Sbjct: 545 IFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMIS 604

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
           +G+ P++ TF+AIL ACSHSGLV+  +  F  MQ   G+ P   HYTCM+D L RAGH  
Sbjct: 605 AGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQ-ACGISPKAKHYTCMVDVLARAGHLA 663

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           EAE L+ ++  K +   W  LLS+C ++ N  + +RAA+ L  LD  N+A Y LL+N+Y+
Sbjct: 664 EAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYA 723

Query: 720 SLGRWDDLRAVRELMSENCIVKD 742
           S G+W D   +R LM    + KD
Sbjct: 724 SCGKWKDAAEMRILMKGINLKKD 746



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 250/525 (47%), Gaps = 83/525 (15%)

Query: 24  FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPER 83
           F  + ++  + K  +  SA+ LFD MP + + S+  ++ A  K   +  A +L+ + P  
Sbjct: 149 FAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLC 208

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           +V  +  +I+  V N L + AL V+++M + G  P  ITL SV KA     + +      
Sbjct: 209 SVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIV 268

Query: 144 GLVIKIG-LDKNIYVANALLSLYAKCG-------------------WT------------ 171
           GL +K   LDKN+ V N+L++LY + G                   WT            
Sbjct: 269 GLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDL 328

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
           + A  V +EM E NEV++  +++   +     EA+ ++  M+      +    SSVLG C
Sbjct: 329 EGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGAC 388

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A           +  D +  R +H Q     T+K+    ++ +S++L+DMY K   +  A
Sbjct: 389 A-----------SLQDLRSGRKIHNQ-----TLKMACSNNVFVSSALIDMYCKCKQLPDA 432

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
           ++IF +LP++++V WN +I+GY     ++K +E                           
Sbjct: 433 QMIFYSLPQKNIVCWNSLISGYS---NNSKMVE--------------------------- 462

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
                  E+F  MP+ +V+SWN+++S Y+Q+    +A+K F  M   G  P   T + +L
Sbjct: 463 -----AEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVL 517

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
            +CA++  LE GK VHA  +K       +V + L  +Y+K    + ++RVF+ +P+ + V
Sbjct: 518 LACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDV 577

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            W +MI GL+ N    E+ + F+ M    + P + +F  +L +C+
Sbjct: 578 AWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACS 622



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 160/328 (48%), Gaps = 20/328 (6%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ +H   L+    ++ F+ + LI++Y KC     AQ +F  +P K+I  WN+++S   
Sbjct: 396 SGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYS 455

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +  +  A +LF +MP RNV SWN++IS   +N     AL  ++ M   G  P  IT +S
Sbjct: 456 NNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSS 515

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A  +L  +E G+  H  +IK+G+ ++I+V  AL  +YAK G    +  VF EM + N
Sbjct: 516 VLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRN 575

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +V +TAM+ GLA+     E++ +F  MI   ++ +  +  ++L  C+  G  VE      
Sbjct: 576 DVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGL-VE------ 628

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV- 304
                    H      +    G          ++D+ A+ G +  AE +   +  +S   
Sbjct: 629 ---------HAMHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEAN 679

Query: 305 SWNVMIAG---YGQKYQSTKAIELLQRM 329
           SW  +++    Y  K    +A + LQ +
Sbjct: 680 SWAALLSACNIYRNKEMGERAAKRLQEL 707



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 32/191 (16%)

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK----- 595
           F    ++  + K GDI  AR+ FD M  ++ V++  M+    + G   +AV LY+     
Sbjct: 149 FAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLC 208

Query: 596 --------------------------DMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
                                     +M++ GV P++IT V+++ AC  +G  D+ + I 
Sbjct: 209 SVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIV 268

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
                 + ++  L     +I    R G    A  + DEM  + D V W  LL       +
Sbjct: 269 GLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVR-DVVSWTALLDVYAELGD 327

Query: 690 VRLAKRAAEEL 700
           +  A+R  +E+
Sbjct: 328 LEGARRVLDEM 338


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 211/663 (31%), Positives = 339/663 (51%), Gaps = 76/663 (11%)

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           ++V WN  ISA +R G  E ALSV+N M     V  +  ++     S    D      C 
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYL--SNNKFD------CA 110

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
             V +   D+++   N +LS Y K G    A  +F +M E + V++ AM+SG A+   V 
Sbjct: 111 RKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           EA ++F  M+ K    + +S + +L    + G  +E D     D+K              
Sbjct: 171 EARKIFDQMLVK----NEISWNGLLSAYVQNG-RIE-DARRLFDSKM------------- 211

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
                + ++   N L+  Y +   +D A  +F  +P R  +SWN+MI GY Q    ++A 
Sbjct: 212 -----DWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEAR 266

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
            L + +       D      M+   V++G +     +F+ MP  +  SWNAM++ Y QS+
Sbjct: 267 RLFEELPI----RDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQ 322

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
             ++A +LF +M      P R T +                              N + +
Sbjct: 323 QIEKARELFDQM------PSRNTSSW-----------------------------NTMVT 347

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           G    Y++C   + A+ +F  +P+ D + W +MI+G + +    EA   F +M+++    
Sbjct: 348 G----YAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGIL 403

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            + + A  LSSCA++++   G+Q+H ++ K G+      G+AL+ MY KCG I  A   F
Sbjct: 404 NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVF 463

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           + +  K+ V+WN MI GYA++G+G EA+ L++ M  + +KPDD+T V +L+ACSH+GLVD
Sbjct: 464 EDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVD 522

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G+E FNSM  ++G+     HYTCMID LGRAG   EA  L+  MP   D   W  LL +
Sbjct: 523 KGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 582

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
            R+H +  L ++AAE++F ++P NS  Y LL+N+Y++ GRW ++R +R  M +  + K P
Sbjct: 583 SRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVP 642

Query: 744 AYS 746
            YS
Sbjct: 643 GYS 645



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 267/605 (44%), Gaps = 105/605 (17%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
           T   N +I  Y   N    A+ +F+KMP +D+ SWN +LS   K+ +L  A  LF++MPE
Sbjct: 91  TVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPE 150

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
           ++VVSWN ++S   +NG  E+A  ++++M     V   I+   +  A      +E  RR 
Sbjct: 151 KDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARR- 205

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
              +    +D  I   N L+  Y +      A  +F+ M   +++++  M++G A+   +
Sbjct: 206 ---LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLL 262

Query: 203 VEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
            EA  +F  L IR                          DVFA +               
Sbjct: 263 SEARRLFEELPIR--------------------------DVFAWT--------------- 281

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
                          +++  + +NG +D A  IF  +PE++ VSWN MIAGY Q  Q  K
Sbjct: 282 ---------------AMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEK 326

Query: 322 AIELLQRMKSCGFEPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
           A EL  +M S        +S N M+    + G+I   + +FD MP     SW AM+S Y+
Sbjct: 327 ARELFDQMPS-----RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYA 381

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           QS   +EA+ LF +M+  G   +R+ LA  LSSCA +  LE GKQ+H   +K        
Sbjct: 382 QSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYI 441

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
             + L+ +Y KC   E A  VF  I E DIV WN+MIAG + +    EA   F+ M+   
Sbjct: 442 AGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT- 500

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           + P   +   VLS+C+      +G +         Y N          MY   G    A+
Sbjct: 501 IKPDDVTLVGVLSACSHTGLVDKGME---------YFNS---------MYQNYGITANAK 542

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
            +              MI    + G  DEA+ L K M      PD  T+ A+L A    G
Sbjct: 543 HY------------TCMIDLLGRAGRLDEALNLMKSM---PFYPDAATWGALLGASRIHG 587

Query: 621 LVDVG 625
             ++G
Sbjct: 588 DTELG 592



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 201/417 (48%), Gaps = 69/417 (16%)

Query: 19  LFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           LFD     D    N +I  Y++      A+ LF+++P +D+++W A++S   ++  L+ A
Sbjct: 237 LFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEA 296

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
            ++F+EMPE+N VSWN +I+  V++   EKA  ++++M +                    
Sbjct: 297 TRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPS-------------------- 336

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
                              +N    N +++ YA+CG    A  +F+EM + + +++ AM+
Sbjct: 337 -------------------RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI 377

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           SG A++ +  EAL +F  M R    ++  +L+  L  CA E   +E              
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCA-EIAALE-------------- 422

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+Q+H   +K GF+      N+LL MY K G ++ A  +F ++ E+ +VSWN MIAGY
Sbjct: 423 -LGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGY 481

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-----PSPS 368
            +     +A+ L + MK    +PD+VT + +L AC  +G +  G E F+SM      + +
Sbjct: 482 ARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
              +  M+    ++    EA+ L + M F    PD  T   +L +    G  E G++
Sbjct: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFY---PDAATWGALLGASRIHGDTELGEK 594



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 171/378 (45%), Gaps = 53/378 (14%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N +I  Y +      A+ LFD+MP ++  SWN +++   +  +++ A  LFDEMP+R+ +
Sbjct: 312 NAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCI 371

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  +IS   ++G  E+AL ++ KM  +G +     LA    +   +  +E G++ HG +
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRL 431

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K G        NALL++Y KCG  + A  VFE+++E + V++  M++G A+     EAL
Sbjct: 432 VKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEAL 491

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            +F  M +  +  D V+L  VL  C+  G     D   +  N   +N             
Sbjct: 492 ALFESM-KMTIKPDDVTLVGVLSACSHTGL---VDKGMEYFNSMYQN------------Y 535

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           G  A+      ++D+  + G +D A                                  L
Sbjct: 536 GITANAKHYTCMIDLLGRAGRLDEA----------------------------------L 561

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM--PSPSVSSWNAMLSS-YSQSE 383
             MKS  F PD  T   +L A    GD + G +  + +    P  S    +LS+ Y+ S 
Sbjct: 562 NLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASG 621

Query: 384 NHKEAIKLFREMQFRGVK 401
             +E  ++  +M+ +GVK
Sbjct: 622 RWREVREMRSKMRDKGVK 639



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH  +++ G        N L+ +Y KC +   A  +F+ +  KDI SWN +++   +
Sbjct: 424 GKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYAR 483

Query: 67  SDDLEFAYKLFDEMP---ERNVVSWNNLISALVRNGLEEKALSVYNKM 111
               + A  LF+ M    + + V+   ++SA    GL +K +  +N M
Sbjct: 484 HGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSM 531


>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 210/751 (27%), Positives = 369/751 (49%), Gaps = 101/751 (13%)

Query: 75  KLFDEMPERNVVSWNNLISALV-RNGLEEKALSVYNKM-SNEGFVPTHITLASVFKASTA 132
           KLFD++   + V WN ++S     N  +   + V+  M S+   +P  +T+A+V      
Sbjct: 99  KLFDQLSHCDPVVWNIVLSGFSGSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCAR 158

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH-AVPVFEEMSEPNEVTFTA 191
           L D++ G+  HG VIK G D++    NAL+S+YAKCG   H A  VF+ ++  + V++ A
Sbjct: 159 LGDLDAGKCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNA 218

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           M++GLA+   V +A  +F  M++     +  +++++L VCA             S +K  
Sbjct: 219 MIAGLAENRLVEDAFLLFSSMVKGPTRPNYATVANILPVCA-------------SFDKSV 265

Query: 252 RNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
               G+Q+H   ++     AD+ + N+L+ +Y K G M  AE +F  +  R +V+WN  I
Sbjct: 266 AYYCGRQIHSYVLQWPELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFI 325

Query: 311 AGYGQKYQSTKAIELLQRMKSC-GFEPDEVTSINMLVACVRSGDIKTGREM--------- 360
           AGY    +  KA+ L   + S     PD VT +++L AC +  ++K G+++         
Sbjct: 326 AGYTSNGEWLKALHLFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPF 385

Query: 361 ---------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                      F  +    + SWN++  ++ +  +H   + L  
Sbjct: 386 LFYDTAVGNALVSFYAKCGYTEEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLH 445

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN---YVASGLIGIYS 450
            M    ++PD  T+  I+  CA++  +E  K++H+ S++T S + N    V + ++  YS
Sbjct: 446 CMLKLRIRPDSVTILAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYS 505

Query: 451 KCQRNELAERVFHRI--------------------------------PELDIVCWNSMIA 478
           KC   E A ++F  +                                 E D+  WN M+ 
Sbjct: 506 KCGNMEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVR 565

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV- 537
             + N    +A     +++   M P   +  ++L  C +++S      VH   +  GY+ 
Sbjct: 566 VYAENDCPEQALGLCHELQARGMKPDTVTIMSLLPVCTQMAS------VHLLSQCQGYII 619

Query: 538 ----NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
                D+ + +AL++ Y KCG I  A + F +   K+ V +  MI GYA +G  +EA+ +
Sbjct: 620 RSCFKDLHLEAALLDAYAKCGIIGRAYKIFQLSAEKDLVMFTAMIGGYAMHGMSEEALWI 679

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +  M+  G++PD I F +IL+ACSH+G VD G++IF S++  HG++P ++ Y C++D L 
Sbjct: 680 FSHMLKLGIQPDHIIFTSILSACSHAGRVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLA 739

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           R G   EA  L+  +P + +  +W  LL +C+ H  V L +  A +LF+++  +   Y +
Sbjct: 740 RGGRISEAYSLVTSLPIEANANLWGTLLGACKTHHEVELGRIVANQLFKIEANDIGNYIV 799

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           L+N+Y++  RWD +  VR +M  N  +K PA
Sbjct: 800 LSNLYAADARWDGVMEVRRMM-RNKDLKKPA 829



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 172/664 (25%), Positives = 294/664 (44%), Gaps = 107/664 (16%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITLASVFKASTALLDVE 137
           M  R+  +W ++I +L       +ALS+++     +E F P H  LA++ K+ +ALL   
Sbjct: 1   MLGRDFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPN 60

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
            GR  HG V+K G          LL++YAKCG     + +F+++S  + V +  ++SG +
Sbjct: 61  LGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFS 120

Query: 198 KTDRV-VEALEMFRLM--IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
            +++   + + +FR+M   R+A+  +SV++++VL VCAR G     D+ A          
Sbjct: 121 GSNKCDADVMRVFRMMHSSREALP-NSVTVATVLPVCARLG-----DLDA---------- 164

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD-SAEVIFSNLPERSVVSWNVMIAGY 313
            G+ VH   IK GF+ D    N+L+ MYAK G +   A  +F N+  + VVSWN MIAG 
Sbjct: 165 -GKCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGL 223

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------------- 348
            +      A  L   M      P+  T  N+L  C                         
Sbjct: 224 AENRLVEDAFLLFSSMVKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPEL 283

Query: 349 --------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                         ++ G ++    +F +M +  + +WNA ++ Y+ +    +A+ LF  
Sbjct: 284 SADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGN 343

Query: 395 M-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS-HIDNYVASGLIGIYSKC 452
           +     + PD  T+  IL +CA +  L+ GKQ+HA   +      D  V + L+  Y+KC
Sbjct: 344 LASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKC 403

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              E A   F  I   D++ WNS+                   M +  + P   +   ++
Sbjct: 404 GYTEEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILAII 463

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYV---NDIFVGSALIEMYCKCGDI-YGARQFFDMMHG 568
             CA L    + +++H+   + G +       VG+A+++ Y KCG++ Y  + F ++   
Sbjct: 464 RLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEK 523

Query: 569 KNTV-------------------------------TWNEMIHGYAQNGYGDEAVRLYKDM 597
           +N V                               TWN M+  YA+N   ++A+ L  ++
Sbjct: 524 RNLVTCNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHEL 583

Query: 598 IASGVKPDDITFVAILTACSHSGLVDV-----GVEIFNSMQLDHGVEPILDHYT-CMIDC 651
            A G+KPD +T +++L  C+    V +     G  I +  +  H    +LD Y  C I  
Sbjct: 584 QARGMKPDTVTIMSLLPVCTQMASVHLLSQCQGYIIRSCFKDLHLEAALLDAYAKCGI-- 641

Query: 652 LGRA 655
           +GRA
Sbjct: 642 IGRA 645



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/480 (22%), Positives = 204/480 (42%), Gaps = 87/480 (18%)

Query: 3   AHVAGKLLHAHILR-NGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           A+  G+ +H+++L+   L  D  +CN LI LY K      A+ LF  M  +D+ +WNA  
Sbjct: 266 AYYCGRQIHSYVLQWPELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNA-- 323

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFVPTH 120
                                         I+    NG   KAL ++  +++ E  +P  
Sbjct: 324 -----------------------------FIAGYTSNGEWLKALHLFGNLASLETLLPDS 354

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           +T+ S+  A   L +++ G++ H  + +   L  +  V NAL+S YAKCG+T+ A   F 
Sbjct: 355 VTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEEAYHTFS 414

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA------- 232
            +S  + +++ ++     +       L +   M++  +  DSV++ +++ +CA       
Sbjct: 415 MISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLCASLLRVEK 474

Query: 233 ---------REGCGVESDVFAQSD---NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
                    R G  + +      +   + +S+  + +  + +   L  + +L   NSL+ 
Sbjct: 475 VKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTCNSLIS 534

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
            Y   G    A +IFS + E  + +WN+M+  Y +     +A+ L   +++ G +PD VT
Sbjct: 535 GYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHELQARGMKPDTVT 594

Query: 341 SINMLVAC----------------VRS------------------GDIKTGREMFDSMPS 366
            +++L  C                +RS                  G I    ++F     
Sbjct: 595 IMSLLPVCTQMASVHLLSQCQGYIIRSCFKDLHLEAALLDAYAKCGIIGRAYKIFQLSAE 654

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
             +  + AM+  Y+     +EA+ +F  M   G++PD      ILS+C+  G ++ G ++
Sbjct: 655 KDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACSHAGRVDEGLKI 714



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 200/468 (42%), Gaps = 75/468 (16%)

Query: 7   GKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK +HA+I R+  LF DT + N L+  Y+KC  T                          
Sbjct: 373 GKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYT-------------------------- 406

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                E AY  F  +  ++++SWN++  A        + LS+ + M      P  +T+ +
Sbjct: 407 -----EEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILA 461

Query: 126 VFKASTALLDVEHGRRCHGLVIKIG-LDKNI--YVANALLSLYAKCGWTKHAVPVFEEMS 182
           + +   +LL VE  +  H   I+ G L  N    V NA+L  Y+KCG  ++A  +F+ +S
Sbjct: 462 IIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLS 521

Query: 183 EP-NEVTFTAMMSG----------------LAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
           E  N VT  +++SG                +++TD     L  + LM+R  V  ++    
Sbjct: 522 EKRNLVTCNSLISGYVGLGSHHDANMIFSGMSETD-----LTTWNLMVR--VYAENDCPE 574

Query: 226 SVLGVCAR-EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE-----ADLHLSNSLL 279
             LG+C   +  G++ D      +          VH L+   G+       DLHL  +LL
Sbjct: 575 QALGLCHELQARGMKPDTVTIM-SLLPVCTQMASVHLLSQCQGYIIRSCFKDLHLEAALL 633

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
           D YAK G +  A  IF    E+ +V +  MI GY     S +A+ +   M   G +PD +
Sbjct: 634 DAYAKCGIIGRAYKIFQLSAEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHI 693

Query: 340 TSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
              ++L AC  +G +  G ++F S+       P+V  +  ++   ++     EA  L   
Sbjct: 694 IFTSILSACSHAGRVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLARGGRISEAYSLVTS 753

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT-ASHIDNYV 441
           +    ++ +      +L +C     +E G+ V     K  A+ I NY+
Sbjct: 754 LP---IEANANLWGTLLGACKTHHEVELGRIVANQLFKIEANDIGNYI 798



 Score = 39.3 bits (90), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 14/124 (11%)

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS--GVKPDDITFVAILTACSHSGLVD 623
           M G++  TW  +I          EA+ L+   +      KPD     AIL +CS     +
Sbjct: 1   MLGRDFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPN 60

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD-----DPVIWE 678
           +G  +       HG      H +C +   G    + +  ML++ +   D     DPV+W 
Sbjct: 61  LGRTL-------HGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWN 113

Query: 679 VLLS 682
           ++LS
Sbjct: 114 IVLS 117


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 209/681 (30%), Positives = 339/681 (49%), Gaps = 67/681 (9%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P    L ++  A + L ++  GRR H  +     ++N  + NAL+S+Y+KCG    A   
Sbjct: 5   PNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQA 64

Query: 178 FEEM---SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAR 233
           F+ +   S+ + VT+ AM+S   +     EAL++FR M    A   +SV+  SVL  C  
Sbjct: 65  FDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVE 124

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
            G     DV         R +HG+      +  G E +  +  +L+D Y K G +D A  
Sbjct: 125 AGLLSLEDV---------RAIHGR-----IVGAGIEREAFVRTALVDSYGKLGSLDDAWE 170

Query: 294 IF----SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC- 348
           +F       P  S+V+ + MI+   Q     +++ L   M   G +P  VT +++L AC 
Sbjct: 171 VFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS 230

Query: 349 -----------------------------------VRSGDIKTGREMFDSMPSPSVSSWN 373
                                               RS D+   R  FD++ SP V SWN
Sbjct: 231 MLPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWN 290

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES---GKQVHAAS 430
           AM ++Y Q    +EA+ LF  M   GV+P   T    L++CAA     +   GK++ +  
Sbjct: 291 AMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLL 350

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL--DIVCWNSMIAGLSLNSLDIE 488
            +     D  VA+  + +Y+KC     A  VF RI     D + WNSM+A    + L  E
Sbjct: 351 EEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKE 410

Query: 489 AFMFFKQMRQNEMY-PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           AF  F+ M   ++  P + +F  VL +    +S  QGR++HA++  +G+ +D  + +AL+
Sbjct: 411 AFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALL 470

Query: 548 EMYCKCGDIYGARQFFDMM--HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
            MY KCG +  A+  FD    + ++ + W  ++ GYAQ G  + A++L+  M   GV+P+
Sbjct: 471 NMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPN 530

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            ITF++ LTAC+H G ++ G E+ + M  DHG+ P   H++C++D LGR G   EAE L+
Sbjct: 531 HITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLL 590

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
            E   + D + W  LL +C+    +   +R AE + +LDP+ ++ Y +LA++Y++ GRW+
Sbjct: 591 -ERTSQADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWN 649

Query: 726 DLRAVRELMSENCIVKDPAYS 746
           +   +R+ M +  I  DP  S
Sbjct: 650 EAATIRKTMLDKGIRADPGCS 670



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 167/686 (24%), Positives = 287/686 (41%), Gaps = 130/686 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H+ I      +++ L N LI +YSKC +   A+  FD++P               
Sbjct: 25  AGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRAS------------ 72

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH-ITLA 124
                           +R+VV+WN +ISA +RNG   +AL ++  M ++G  P + +T  
Sbjct: 73  ----------------KRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFV 116

Query: 125 SVFKA--STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           SV  +     LL +E  R  HG ++  G+++  +V  AL+  Y K G    A  VF   S
Sbjct: 117 SVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKS 176

Query: 183 --EPNE--VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
             EP+   VT +AM+S   +     E+L +F  M  +      V+L SVL  C+    G 
Sbjct: 177 DEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVG- 235

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                  S   F   V  Q +  ++       D  L  +LL  YA++ D+  A   F  +
Sbjct: 236 -------SATAF---VLEQAMEVVSAT----RDNVLGTTLLTTYARSNDLSRARATFDAI 281

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------- 348
               VVSWN M A Y Q ++  +A+ L +RM   G  P   T I  L AC          
Sbjct: 282 QSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASA 341

Query: 349 ----------------------------VRSGDIKTGREMFDSMPSPSVS---SWNAMLS 377
                                        + G +   R +F+ + SP+     +WN+ML+
Sbjct: 342 IGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERI-SPTRRDCITWNSMLA 400

Query: 378 SYSQSENHKEAIKLFREMQF-RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           +Y      KEA +LF+ M+  + VKP++ T   +L +  +   +  G+++HA  +     
Sbjct: 401 AYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFE 460

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIP--ELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
            D  + + L+ +Y+KC   + A+ +F +    + D++ W S++AG +       A   F 
Sbjct: 461 SDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFW 520

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKC 553
            M+Q  + P   +F + L++C       QG ++ + +  D G V      S ++++  +C
Sbjct: 521 TMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRC 580

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHG--------------------------------- 580
           G +  A +  +     + +TW  ++                                   
Sbjct: 581 GRLDEAEKLLERTSQADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLAS 640

Query: 581 -YAQNGYGDEAVRLYKDMIASGVKPD 605
            YA  G  +EA  + K M+  G++ D
Sbjct: 641 MYAAAGRWNEAATIRKTMLDKGIRAD 666



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 118/228 (51%), Gaps = 10/228 (4%)

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V+P+   L  ++++C+ +G L +G+++H+         ++ + + LI +YSKC     A+
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 460 RVFHRIP---ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP-TQFSFATVLSSC 515
           + F R+P   + D+V WN+MI+    N    EA   F+ M  +   P    +F +VL SC
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122

Query: 516 --AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF----DMMHGK 569
             A L S    R +H +I   G   + FV +AL++ Y K G +  A + F    D     
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
           + VT + MI    QNG+  E++RL+  M   G KP  +T V++L ACS
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS 230



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/419 (22%), Positives = 183/419 (43%), Gaps = 79/419 (18%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           + A   GK + + +   GL  DT + N  + +Y+KC +   A+ +F+++           
Sbjct: 337 QTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPT-------- 388

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PT 119
                                 R+ ++WN++++A   +GL ++A  ++  M  E  V P 
Sbjct: 389 ---------------------RRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPN 427

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
            +T  +V  AST+   +  GR  H  V+  G + +  + NALL++YAKCG    A  +F+
Sbjct: 428 KVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFD 487

Query: 180 EMSEPNE--VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC-----A 232
           + S   E  + +T++++G A+  +   AL++F  M ++ V  + ++  S L  C      
Sbjct: 488 KSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKL 547

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
            +GC + S +            HG             A  H S  ++D+  + G +D AE
Sbjct: 548 EQGCELLSGMTPD---------HGI----------VPASKHFS-CIVDLLGRCGRLDEAE 587

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-----FEPDEVTS----IN 343
            +     +  V++W  ++        + K  + L+R + C       +P+  +S     +
Sbjct: 588 KLLERTSQADVITWMALL-------DACKNSKELERGERCAERIMQLDPEVASSYIVLAS 640

Query: 344 MLVACVRSGDIKTGRE-MFD----SMPSPSVSSWNAMLSSYSQSE-NHKEAIKLFREMQ 396
           M  A  R  +  T R+ M D    + P  S    N  L S+S  + +H ++ +++ E++
Sbjct: 641 MYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELE 699



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 105/194 (54%), Gaps = 10/194 (5%)

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
           E+ P   +   ++++C+ L +   GR++H+QI    +  +  +G+ALI MY KCG +  A
Sbjct: 2   EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61

Query: 560 RQFFDMM---HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV-KPDDITFVAILTA 615
           +Q FD +     ++ VTWN MI  + +NG   EA++L++DM   G   P+ +TFV++L +
Sbjct: 62  KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121

Query: 616 CSHSGLVDV-GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA-EMLI---DEMPC 670
           C  +GL+ +  V   +   +  G+E      T ++D  G+ G   +A E+ +   DE P 
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEP- 180

Query: 671 KDDPVIWEVLLSSC 684
               V    ++S+C
Sbjct: 181 STSLVTCSAMISAC 194


>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 205/695 (29%), Positives = 346/695 (49%), Gaps = 54/695 (7%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S+N+L+S L   G   + L  Y  M          T  S+FKA T L    HG   H  V
Sbjct: 16  SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +  GL  + Y+ ++L+S YAK G       VF+ M + N V +T ++   ++   +  A 
Sbjct: 76  VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            MF+ M    +   SV+L S+L                      S+      +HCL I  
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLL-------------------PGISKLPLLLCLHCLIILH 176

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           GFE+DL LSNS+++MY K G +  A  +F ++  R +VSWN +++ Y +   + + ++LL
Sbjct: 177 GFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLL 236

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------------------- 358
           Q MK    +PD+ T  + L A    GD++ G+                            
Sbjct: 237 QAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRC 296

Query: 359 -------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
                  ++F S     V  W AM+S   Q++   +A+ +F +M    VKP   TLA  L
Sbjct: 297 RCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGL 356

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
           ++CA +G  + G  +H   L+    +D    + L+ +Y+KC + + +  +F+++ E D+V
Sbjct: 357 AACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLV 416

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
            WN+++AG + N    +   FF +MR++ + P   +  ++L +C    +  QG+ +H  +
Sbjct: 417 SWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFV 476

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
            +   +  I   +AL++MY KCG++  A++ FD M  ++ V W+ +I GY  NG G+ A+
Sbjct: 477 LRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIAL 536

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
           R Y + + +G++P+ + F+++L+ACSH GL+  G+ I+ SM  D  + P L+H  C++D 
Sbjct: 537 RKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDL 596

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           L RAG   EA      M  +   V+  +LL +CR++  V L K  A ++F L P +   +
Sbjct: 597 LSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNF 656

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             LAN Y+S+ RWD +      M    + K P +S
Sbjct: 657 VQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWS 691



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 146/637 (22%), Positives = 275/637 (43%), Gaps = 89/637 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH  ++ NGL  D+++ + LI  Y+K    H                          
Sbjct: 68  GLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIH-------------------------- 101

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+FD M +RNVV W  +I +  R G  + A S++ +M   G  PT +TL S+
Sbjct: 102 -----LGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSL 156

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               + L         H L+I  G + ++ ++N+++++Y KCG    A  +F+ +   + 
Sbjct: 157 LPGISKL---PLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDI 213

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +++S  +K     E L++ + M  + +  D  +  S L   A +G           
Sbjct: 214 VSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKG----------- 262

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D +  + VHG     L +K G   D H+ ++L+ +Y +   +D A  +F +  E+ VV W
Sbjct: 263 DLRLGKLVHG-----LMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMW 317

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
             MI+G  Q   + KA+ +  +M     +P   T  + L AC + G    G         
Sbjct: 318 TAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLR 377

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +F+ M    + SWNA+++ ++++    + I  
Sbjct: 378 QGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFF 437

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F EM+   ++PD  T+  +L +C + G L  GK +H   L+++        + L+ +Y K
Sbjct: 438 FNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFK 497

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E A++ F  + + D+V W+++I G   N     A   + +     M P    F +V
Sbjct: 498 CGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISV 557

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGK- 569
           LS+C+      +G  ++  + KD  ++ ++   + ++++  + G +  A  F+ MM  + 
Sbjct: 558 LSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEP 617

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           + V    ++     NG  +    + +DM    +KP D
Sbjct: 618 SIVVLGMLLDACRVNGRVELGKVIARDMFE--LKPVD 652



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 157/327 (48%), Gaps = 17/327 (5%)

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           +S+      S+N+++S  S    H + ++ +  MQ    + D  T   +  +C  + +  
Sbjct: 7   ESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFS 66

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G  +H + +      D+Y+ S LI  Y+K     L  +VF  + + ++V W ++I   S
Sbjct: 67  HGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYS 126

Query: 482 LNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
               DI+ AF  FKQMR++ + PT  +  ++L   +KL        +H  I   G+ +D+
Sbjct: 127 REG-DIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLL---LCLHCLIILHGFESDL 182

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            + ++++ MY KCG I  AR+ F  +  ++ V+WN ++  Y++ G  +E ++L + M   
Sbjct: 183 ALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIE 242

Query: 601 GVKPDDITFVAILTACSHSGLVDV-----GVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
            +KPD  TF + L+A +  G + +     G+ + + + +D  VE  L        CL  A
Sbjct: 243 DIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPA 302

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLS 682
               ++         + D V+W  ++S
Sbjct: 303 YKVFKSTT-------EKDVVMWTAMIS 322


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 201/702 (28%), Positives = 335/702 (47%), Gaps = 92/702 (13%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P ++T  +V  + ++  DV  GR  H  +     +++  V NAL+S+Y KC     A  V
Sbjct: 5   PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 178 FEEMS--EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           FE M   + N V++ AM++  A+     EAL ++  M  + +  D V+  SVLG C    
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---- 120

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                          S    G+++H      G ++   L+N+L+ MYA+ G +  A+ +F
Sbjct: 121 ---------------SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMF 165

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN------------ 343
            +L  R   SWN +I  + Q    + A+ + + MK C  +P+  T IN            
Sbjct: 166 QSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLP 224

Query: 344 -----------------MLVACV------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                            ++VA        + G     RE+FD M    + SWN M+  Y 
Sbjct: 225 EGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYV 284

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
            + +  EA++L++++   G K  + T   IL +C+++  L  G+ VH+  L+     +  
Sbjct: 285 LNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVA 344

Query: 441 VASGLIGIYSKCQRNELAERVFH----------------------------------RIP 466
           VA+ L+ +Y+KC   E A +VF+                                  R+ 
Sbjct: 345 VATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLG 404

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLSSSFQGR 525
             D + WN+MI     N   + A   F++M     + P   +F  VL +CA L    + +
Sbjct: 405 SRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVK 464

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
            +HAQI +    +++ V + LI MY +CG +  A + F     K  V+W  M+  ++Q G
Sbjct: 465 ALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYG 524

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
              EA+ L+++M   GVKPDD+T+ +IL  C+H G ++ G   F  M   H + P  DH+
Sbjct: 525 RYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHF 584

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
             M+D LGR+G   +A+ L++ MP + DPV W   L++CR+H  + L + AAE ++ LDP
Sbjct: 585 AAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDP 644

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            ++APY  ++NIY++ G W+ + +VR+ M E  + K P  S 
Sbjct: 645 SSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSF 686



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 166/694 (23%), Positives = 293/694 (42%), Gaps = 158/694 (22%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ LH  I  +    DT + N LI +Y KC++   A+ +F+ M       W       
Sbjct: 24  VEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM------DWR------ 71

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                            +RNVVSWN +I+A  +NG   +AL +Y +M+ +G    H+T  
Sbjct: 72  -----------------QRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFV 114

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV  A ++L     GR  H  V   GLD    +ANAL+++YA+ G    A  +F+ +   
Sbjct: 115 SVLGACSSL---AQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTR 171

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +E ++ A++   +++     AL +F+ M        +  ++ + G    E       V  
Sbjct: 172 DETSWNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPE-------VLP 224

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           +          G+++H   +  GF+ DL ++ +L++MY K G    A  +F  + +R +V
Sbjct: 225 E----------GRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMV 274

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
           SWNVMI  Y       +A+EL Q++   GF+  + T +++L AC                
Sbjct: 275 SWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHI 334

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSW----------------- 372
                               + G ++  R++F++M +    +W                 
Sbjct: 335 LERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDAR 394

Query: 373 -----------------NAMLSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLAIILSSC 414
                            NAM+++Y Q+     A+K+FREM    G+KPD  T   +L +C
Sbjct: 395 KARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEAC 454

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           A++G L   K +HA   ++    +  V + LI +Y++C   E AER+F    E  +V W 
Sbjct: 455 ASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWT 514

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH---AQI 531
           +M+A  S      EA   F++M    + P   ++ ++L  C    S  QG +     A++
Sbjct: 515 AMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAEL 574

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
                  D F  +A++++  + G ++ A++  + M                         
Sbjct: 575 HALAPTADHF--AAMVDLLGRSGRLFDAKELLESMP------------------------ 608

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
                      +PD + ++  LTAC   G +++G
Sbjct: 609 ----------FEPDPVAWMTFLTACRIHGKLELG 632



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 231/500 (46%), Gaps = 73/500 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA I+ NG   D  +   LI +Y KC ++H A+ +FDK                  
Sbjct: 226 GRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDK------------------ 267

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        M +R++VSWN +I   V NG   +AL +Y K+  EGF  T  T  S+
Sbjct: 268 -------------MKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSI 314

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A +++  +  GR  H  +++ GLD  + VA AL+++YAKCG  + A  VF  M   + 
Sbjct: 315 LGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDA 374

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
           V ++ ++   A      +A +  ++  R   S D++S ++++    + GC V +  +F +
Sbjct: 375 VAWSTLIGAYASNGYGKDARKARKVFDRLG-SRDTISWNAMITTYVQNGCAVAAMKIFRE 433

Query: 246 SDN-------------------KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
                                    R    + +H    +   E+++ ++N+L++MYA+ G
Sbjct: 434 MTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCG 493

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
            ++ AE +F+   E++VVSW  M+A + Q  +  +A++L Q M   G +PD+VT  ++L 
Sbjct: 494 SLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILF 553

Query: 347 ACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
            C   G ++ G   F  M      +P+   + AM+    +S    +A +L   M F   +
Sbjct: 554 VCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPF---E 610

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKT----ASHIDNYVASGLI----GIYSKCQ 453
           PD       L++C   G LE G+   AA+ +      S    Y+A   I    G++ K  
Sbjct: 611 PDPVAWMTFLTACRIHGKLELGE---AAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVA 667

Query: 454 --RNELAERVFHRIPELDIV 471
             R ++ ER   ++P L  +
Sbjct: 668 SVRKKMEERGLKKLPGLSFI 687



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 192/407 (47%), Gaps = 56/407 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+L+H+HIL  GL  +  +   L+ +Y+KC +   A+ +F+ M ++D  +W+ ++
Sbjct: 322 KALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLI 381

Query: 62  SAQCKS---DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFV 117
            A   +    D   A K+FD +  R+ +SWN +I+  V+NG    A+ ++ +M+   G  
Sbjct: 382 GAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLK 441

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  +T  +V +A  +L  +   +  H  + +  L+ N+ V N L+++YA+CG  + A  +
Sbjct: 442 PDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERL 501

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F    E   V++TAM++  ++  R  EAL++F+ M  + V  D V+ +S+L VC   G  
Sbjct: 502 FAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGS- 560

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                  Q    F+      ++H L       AD H + +++D+  ++G +  A+ +  +
Sbjct: 561 -----LEQGWRYFTDMA---ELHALAPT----AD-HFA-AMVDLLGRSGRLFDAKELLES 606

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +P                                  FEPD V  +  L AC   G ++ G
Sbjct: 607 MP----------------------------------FEPDPVAWMTFLTACRIHGKLELG 632

Query: 358 R---EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
               E    +   S + + AM + Y+     ++   + ++M+ RG+K
Sbjct: 633 EAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLK 679



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 147/283 (51%), Gaps = 8/283 (2%)

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           +PD  T   +L SC++ G +  G+ +H     +    D  V + LI +Y KC     A  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 461 VFHRIP--ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
           VF  +   + ++V WN+MIA  + N    EA + + +M    +     +F +VL +C+ L
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           +   QGR++H ++   G  +   + +AL+ MY + G +  A++ F  +  ++  +WN +I
Sbjct: 124 A---QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
             ++Q+G    A+R++K+M    VKP+  T++ +++  S   ++  G +I   + + +G 
Sbjct: 181 LAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEI-VANGF 238

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           +  L   T +I+  G+ G  HEA  + D+M  K D V W V++
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMK-KRDMVSWNVMI 280


>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 205/695 (29%), Positives = 346/695 (49%), Gaps = 54/695 (7%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S+N+L+S L   G   + L  Y  M          T  S+FKA T L    HG   H  V
Sbjct: 16  SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +  GL  + Y+ ++L+S YAK G       VF+ M + N V +T ++   ++   +  A 
Sbjct: 76  VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            MF+ M    +   SV+L S+L                      S+      +HCL I  
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLL-------------------PGISKLPLLLCLHCLIILH 176

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           GFE+DL LSNS+++MY K G +  A  +F ++  R +VSWN +++ Y +   + + ++LL
Sbjct: 177 GFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLL 236

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------------------- 358
           Q MK    +PD+ T  + L A    GD++ G+                            
Sbjct: 237 QAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRC 296

Query: 359 -------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
                  ++F S     V  W AM+S   Q++   +A+ +F +M    VKP   TLA  L
Sbjct: 297 RCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGL 356

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
           ++CA +G  + G  +H   L+    +D    + L+ +Y+KC + + +  +F+++ E D+V
Sbjct: 357 AACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLV 416

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
            WN+++AG + N    +   FF +MR++ + P   +  ++L +C    +  QG+ +H  +
Sbjct: 417 SWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFV 476

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
            +   +  I   +AL++MY KCG++  A++ FD M  ++ V W+ +I GY  NG G+ A+
Sbjct: 477 LRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIAL 536

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
           R Y + + +G++P+ + F+++L+ACSH GL+  G+ I+ SM  D  + P L+H  C++D 
Sbjct: 537 RKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDL 596

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           L RAG   EA      M  +   V+  +LL +CR++  V L K  A ++F L P +   +
Sbjct: 597 LSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNF 656

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             LAN Y+S+ RWD +      M    + K P +S
Sbjct: 657 VQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWS 691



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 142/637 (22%), Positives = 275/637 (43%), Gaps = 89/637 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH  ++ NGL  D+++ + LI  Y+K    H  + +FD M  +++  W  I+ +  +
Sbjct: 68  GLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSR 127

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D++ A+ +F +M E                                G  PT +TL S+
Sbjct: 128 EGDIDIAFSMFKQMRE-------------------------------SGIQPTSVTLLSL 156

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               + L         H L+I  G + ++ ++N+++++Y KCG    A  +FE +   + 
Sbjct: 157 LPGISKL---PLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDI 213

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +++S  +K     E L++ + M  + +  D  +  S L   A +G           
Sbjct: 214 VSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKG----------- 262

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D +  + VHG     L +K G   D H+ ++L+ +Y +   +D A  +F +  E+ VV W
Sbjct: 263 DLRLGKLVHG-----LMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMW 317

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
             MI+G  Q   + KA+ +  +M     +P   T  + L AC + G    G         
Sbjct: 318 TAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLR 377

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +F+ M    + SWNA+++ ++++    + I  
Sbjct: 378 QGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFF 437

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F EM+   ++PD  T+  +L +C + G L  GK +H   L+++        + L+ +Y K
Sbjct: 438 FNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFK 497

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E A++ F  + + D+V W+++I G   N     A   + +     M P    F +V
Sbjct: 498 CGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISV 557

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGK- 569
           LS+C+      +G  ++  + KD  ++ ++   + ++++  + G +  A  F+ MM  + 
Sbjct: 558 LSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEP 617

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           + V    ++     NG  +    + +DM    +KP D
Sbjct: 618 SIVVLGMLLDACRVNGRVELGKVIARDMFE--LKPVD 652



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 158/327 (48%), Gaps = 17/327 (5%)

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           +S+      S+N+++S  S    H + ++ +  MQ    + D  T   +  +C  + +  
Sbjct: 7   ESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFS 66

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G  +H + +      D+Y+ S LI  Y+K     L  +VF  + + ++V W ++I   S
Sbjct: 67  HGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYS 126

Query: 482 LNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
               DI+ AF  FKQMR++ + PT  +  ++L   +KL        +H  I   G+ +D+
Sbjct: 127 REG-DIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLL---LCLHCLIILHGFESDL 182

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            + ++++ MY KCG I  AR+ F+ +  ++ V+WN ++  Y++ G  +E ++L + M   
Sbjct: 183 ALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIE 242

Query: 601 GVKPDDITFVAILTACSHSGLVDV-----GVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
            +KPD  TF + L+A +  G + +     G+ + + + +D  VE  L        CL  A
Sbjct: 243 DIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPA 302

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLS 682
               ++         + D V+W  ++S
Sbjct: 303 YKVFKSTT-------EKDVVMWTAMIS 322


>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
          Length = 807

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 227/779 (29%), Positives = 362/779 (46%), Gaps = 116/779 (14%)

Query: 6   AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            G+ +HA IL+ G F   + ++  +L+  Y+KC                           
Sbjct: 64  TGQQIHAQILKKGDFYARNEYIETKLVIFYAKC--------------------------- 96

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
               D LE A  LF ++  RNV SW  +I    R GL E AL  + +M   G  P +  +
Sbjct: 97  ----DALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVV 152

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +V KA  AL     GR  HG V K GL   ++VA++L  +Y KCG    A  VF+ + +
Sbjct: 153 PNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPD 212

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V + A+M G  +     EA+ +   M ++ +    V++S+ L   A  G G+E    
Sbjct: 213 RNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMG-GIE---- 267

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q H + I  G E D  L  S+L+ Y K G ++ AE+IF  + E+ V
Sbjct: 268 -----------EGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDV 316

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           V+WN++I+GY Q+    +AI + Q M+    + D VT   ++ A   + ++K G+E+   
Sbjct: 317 VTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCY 376

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           FDS     +  WN +LS+Y+ S    EA
Sbjct: 377 CIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEA 436

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           ++LF EMQ   V P+  T  +I+ S    G +   K++    L+  S           GI
Sbjct: 437 LRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMF---LQMQSS----------GI 483

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           +                   +++ W +M+ GL  N    EA +F ++M+++ + P  F+ 
Sbjct: 484 FP------------------NLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTI 525

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDG-YVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              LS+C  L+S   GR +H  I ++  Y     + ++L++MY KCGDI  A + F    
Sbjct: 526 TVALSACVNLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKL 585

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
                 +N MI  YA  G   EA+ LY+ +   GVKPD+IT  ++L+AC++   V+  +E
Sbjct: 586 CSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSACNYGRDVNQAIE 645

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           +F  M   HG++P L+HY  M+D L  AG   +A  L++EMP K D  + + L  SC   
Sbjct: 646 VFRDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMVQSLFESCSKQ 705

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
               L +  ++ L   +P NS  Y +++N Y+  G WD++  +RE+M    + K P  S
Sbjct: 706 HKTELVEYLSKHLLESEPDNSGNYVMISNAYAVEGSWDEVAKMREMMKVKGLKKKPGCS 764



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 166/328 (50%), Gaps = 14/328 (4%)

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           D    P  +S+   +SS  ++   +EA+ L  EM +R ++        IL  C     L 
Sbjct: 4   DQARIPLSTSYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLC 63

Query: 422 SGKQVHAASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           +G+Q+HA  LK       + Y+ + L+  Y+KC   E+A+ +F ++   ++  W ++I  
Sbjct: 64  TGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGV 123

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
                L   A M F +M +N ++P  F    V  +C  L  S  GR VH  + K G  + 
Sbjct: 124 KCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHC 183

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           +FV S+L +MY KCG +  AR+ FD +  +N V WN ++ GY QNG  +EA+RL  +M  
Sbjct: 184 VFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRK 243

Query: 600 SGVKPDDITFVAILTACSHSGLVDVG-----VEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
            G++P  +T    L+A ++ G ++ G     + I N ++LD+ +   + ++ C      +
Sbjct: 244 EGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYC------K 297

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            G    AEM+ D M  + D V W +L+S
Sbjct: 298 VGLIEYAEMIFDGM-IEKDVVTWNLLIS 324


>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
 gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 692

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 204/690 (29%), Positives = 344/690 (49%), Gaps = 54/690 (7%)

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA-----LLDVE 137
           R++  +++L+ + +   +    ++++  +      P H T++   +A+T       L VE
Sbjct: 11  RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
              + H  + K GLD+ +YV  +LL+LY K G    A  +F+EM E + V + A++ G +
Sbjct: 71  Q-VQTH--LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
           +     +A ++F +M+++  S  + +L ++L  C +  CG  S               G+
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQ--CGFVS--------------QGR 171

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
            VH +  K G E D  + N+L+  Y+K  ++ SAEV+F  + ++S VSWN MI  Y Q  
Sbjct: 172 SVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 231

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------------------- 349
              +AI + + M     E   VT IN+L A V                            
Sbjct: 232 LQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAY 291

Query: 350 -RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
            R G + +   ++ S    S+    +++S Y++  +   A+  F + +   +K D   L 
Sbjct: 292 SRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALV 351

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
            IL  C     ++ G  +H  ++K+       V +GLI +YSK    E    +F ++ E 
Sbjct: 352 GILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQET 411

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMR-QNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            ++ WNS+I+G   +     AF  F QM     + P   + A++L+ C++L     G+++
Sbjct: 412 PLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKEL 471

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H    ++ + N+ FV +ALI+MY KCG+   A   F  +    T TWN MI GY+ +G  
Sbjct: 472 HGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQ 531

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
             A+  Y +M   G+KPD+ITF+ +L+AC+H G VD G   F +M  + G+ P L HY  
Sbjct: 532 HRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYAL 591

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
           M+  LGRA  F EA  LI +M  K D  +W  LLS+C +H  + + +  A ++F LD KN
Sbjct: 592 MVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKN 651

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
              Y L++N+Y++   WDD+  VR +M +N
Sbjct: 652 GGLYVLMSNLYATEAMWDDVVRVRNMMKDN 681



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 253/544 (46%), Gaps = 64/544 (11%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQ------HLFDKMPHKDIYSWNAILSAQCKS 67
           +LR+ L  + F  +  ++  +   N+   Q      HL      + +Y   ++L+   K 
Sbjct: 39  LLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKK 98

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
             +  A  LFDEMPER+ V WN LI    RNG E  A  ++  M  +GF P+  TL ++ 
Sbjct: 99  GCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLL 158

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
                   V  GR  HG+  K GL+ +  V NAL+S Y+KC     A  +F EM + + V
Sbjct: 159 PFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTV 218

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++  M+   +++    EA+ +F+ M  K V I  V++ ++L                   
Sbjct: 219 SWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL------------------- 259

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
              S +V  + +HCL +K G   D+ +  SL+  Y++ G + SAE ++++  + S+V   
Sbjct: 260 ---SAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLT 316

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VRS 351
            +++ Y +K     A+    + +    + D V  + +L  C                ++S
Sbjct: 317 SIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKS 376

Query: 352 G-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
           G                   D++T   +F+ +    + SWN+++S   QS     A ++F
Sbjct: 377 GLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVF 436

Query: 393 REMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
            +M    G+ PD  T+A +L+ C+ +  L  GK++H  +L+     +N+V + LI +Y+K
Sbjct: 437 HQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAK 496

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     AE VF  I       WNSMI+G SL+ L   A   + +MR+  + P + +F  V
Sbjct: 497 CGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGV 556

Query: 512 LSSC 515
           LS+C
Sbjct: 557 LSAC 560



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 220/490 (44%), Gaps = 89/490 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H    ++GL  D+ + N LI  YSKC    SA+ LF +M  K   SWN ++ A  +
Sbjct: 170 GRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQ 229

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALV-------------------------- 96
           S   E A  +F  M E+NV    V+  NL+SA V                          
Sbjct: 230 SGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVC 289

Query: 97  ---RNGLEEKALSVYNKMSNEGFVP-THIT----------LASVFKAST----------A 132
              R G    A  +Y     +  V  T I           +A V+ + T          A
Sbjct: 290 AYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVA 349

Query: 133 LLDVEHGRR----------CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L+ + HG +           HG  IK GL     V N L+++Y+K    +  + +FE++ 
Sbjct: 350 LVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ 409

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           E   +++ +++SG  ++ R   A E+F ++M+   +  D+++++S+L  C++  C     
Sbjct: 410 ETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC----- 464

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                      N+ G+++H  T++  FE +  +  +L+DMYAK G+   AE +F ++   
Sbjct: 465 ----------LNL-GKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAP 513

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
              +WN MI+GY       +A+     M+  G +PDE+T + +L AC   G +  G+  F
Sbjct: 514 CTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICF 573

Query: 362 DSM-----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            +M      SP++  +  M+    ++    EA+ L  +M    +KPD      +LS+C  
Sbjct: 574 RAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMD---IKPDSAVWGALLSACII 630

Query: 417 MGILESGKQV 426
              LE G+ V
Sbjct: 631 HRELEVGEYV 640



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 31/236 (13%)

Query: 1   KKAHV-AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           K +H+  G  LH + +++GL   T + N LI +YSK ++  +   LF+++    + SWN+
Sbjct: 359 KSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNS 418

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           ++S   +S     A+++F +M                              M   G +P 
Sbjct: 419 VISGCVQSGRASTAFEVFHQM------------------------------MLTGGLLPD 448

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
            IT+AS+    + L  +  G+  HG  ++   +   +V  AL+ +YAKCG    A  VF+
Sbjct: 449 AITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFK 508

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            +  P   T+ +M+SG + +     AL  +  M  K +  D ++   VL  C   G
Sbjct: 509 SIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGG 564


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 204/700 (29%), Positives = 347/700 (49%), Gaps = 62/700 (8%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S N  I+     G   + L+ Y  M          T  S+ KA + L     G   H  +
Sbjct: 28  SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +  GL  + Y+A++L++ YAK G+   A  VF+ M E N V +T ++   ++T RV EA 
Sbjct: 88  LVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAF 147

Query: 207 EMFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
            +F  M R+ +   SV++ S+L GV                    S   H Q +H   I 
Sbjct: 148 SLFDEMRRQGIQPSSVTVLSLLFGV--------------------SELAHVQCLHGCAIL 187

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
            GF +D++LSNS+L++Y K G+++ +  +F  +  R +VSWN +I+ Y Q     + + L
Sbjct: 188 YGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLL 247

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--------------------------- 358
           L+ M+  GFE    T  ++L      G++K GR                           
Sbjct: 248 LKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLK 307

Query: 359 --------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
                    MF+      V  W AM+S   Q+ +  +A+ +FR+M   GVKP   T+A +
Sbjct: 308 GGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASV 367

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           +++CA +G    G  +    L+    +D    + L+ +Y+KC   + +  VF  +   D+
Sbjct: 368 ITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDL 427

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           V WN+M+ G + N    EA   F +MR +   P   +  ++L  CA       G+ +H+ 
Sbjct: 428 VSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSF 487

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + ++G    I V ++L++MYCKCGD+  A++ F+ M   + V+W+ +I GY  +G G+ A
Sbjct: 488 VIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAA 547

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           +R Y   + SG+KP+ + F+++L++CSH+GLV+ G+ I+ SM  D G+ P L+H+ C++D
Sbjct: 548 LRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVD 607

Query: 651 CLGRAGHFHEA-EMLIDEMPCKDDPV--IWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
            L RAG   EA  +   + P   DPV  +  ++L +CR + N  L    A ++  L P +
Sbjct: 608 LLSRAGRVEEAYNVYKKKFP---DPVLDVLGIILDACRANGNNELGDTIANDILMLRPMD 664

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           +  +  LA+ Y+S+ +W+++      M    + K P +S 
Sbjct: 665 AGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSF 704



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 153/586 (26%), Positives = 264/586 (45%), Gaps = 86/586 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH  IL +GL  D ++ + LI  Y+K                               
Sbjct: 80  GLTLHQRILVSGLSLDAYIASSLINFYAKFGFA--------------------------- 112

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               + A K+FD MPERNVV W  +I    R G   +A S++++M  +G  P+ +T+ S+
Sbjct: 113 ----DVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSL 168

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               + L    H +  HG  I  G   +I ++N++L++Y KCG  +++  +F+ M   + 
Sbjct: 169 LFGVSEL---AHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDL 225

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +++S  A+   + E L + + M  +       +  SVL V A  G           
Sbjct: 226 VSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRG----------- 274

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           + K  R +HGQ      ++ GF  D H+  SL+ +Y K G +D A  +F    ++ VV W
Sbjct: 275 ELKLGRCLHGQ-----ILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLW 329

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
             MI+G  Q   + KA+ + ++M   G +P   T  +++ AC + G    G  +      
Sbjct: 330 TAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILR 389

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        FD M    + SWNAM++ Y+Q+    EA+ L
Sbjct: 390 QELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFL 449

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F EM+     PD  T+  +L  CA+ G L  GK +H+  ++        V + L+ +Y K
Sbjct: 450 FNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCK 509

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   + A+R F+++P  D+V W+++I G   +     A  F+ +  ++ M P    F +V
Sbjct: 510 CGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSV 569

Query: 512 LSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDI 556
           LSSC+      QG  ++  + KD G   D+   + ++++  + G +
Sbjct: 570 LSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRV 615



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 221/460 (48%), Gaps = 59/460 (12%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           DI   N++L+   K  ++E++ KLFD M  R++VSWN+LISA  + G   + L +   M 
Sbjct: 193 DINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMR 252

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            +GF     T  SV   + +  +++ GR  HG +++ G   + +V  +L+ +Y K G   
Sbjct: 253 LQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKID 312

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +FE  S+ + V +TAM+SGL +     +AL +FR M++  V   + +++SV+  CA
Sbjct: 313 IAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACA 372

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
           + G               S N+ G  +    ++     D+   NSL+ MYAK G +D + 
Sbjct: 373 QLG---------------SYNL-GTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSS 416

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--- 349
           ++F  +  R +VSWN M+ GY Q     +A+ L   M+S    PD +T +++L  C    
Sbjct: 417 IVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTG 476

Query: 350 --------------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                                           + GD+ T +  F+ MPS  + SW+A++ 
Sbjct: 477 QLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIV 536

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK---TA 434
            Y      + A++ + +    G+KP+      +LSSC+  G++E G  ++ +  K    A
Sbjct: 537 GYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIA 596

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRI---PELDIV 471
             ++++    ++ + S+  R E A  V+ +    P LD++
Sbjct: 597 PDLEHHAC--VVDLLSRAGRVEEAYNVYKKKFPDPVLDVL 634



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 204/426 (47%), Gaps = 57/426 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  ILR G + D  +   LI +Y                                K
Sbjct: 279 GRCLHGQILRAGFYLDAHVETSLIVVY-------------------------------LK 307

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              ++ A+++F+   +++VV W  +IS LV+NG  +KAL+V+ +M   G  P+  T+ASV
Sbjct: 308 GGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASV 367

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L     G    G +++  L  ++   N+L+++YAKCG    +  VF+ M+  + 
Sbjct: 368 ITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDL 427

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ AM++G A+   V EAL +F  M     + DS+++ S+L  CA  G           
Sbjct: 428 VSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTG----------- 476

Query: 247 DNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                  +H G+ +H   I+ G    + +  SL+DMY K GD+D+A+  F+ +P   +VS
Sbjct: 477 ------QLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVS 530

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W+ +I GYG   +   A+    +    G +P+ V  +++L +C  +G ++ G  +++SM 
Sbjct: 531 WSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMT 590

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                +P +     ++   S++   +EA  ++++   +   P    L IIL +C A G  
Sbjct: 591 KDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKK---KFPDPVLDVLGIILDACRANGNN 647

Query: 421 ESGKQV 426
           E G  +
Sbjct: 648 ELGDTI 653



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 4/264 (1%)

Query: 363 SMPSPSVS-SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           S+P P+ + S NA ++ +S    H + +  +  M    V  D  T   +L +C+ + +  
Sbjct: 19  SLPHPATTNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFS 78

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G  +H   L +   +D Y+AS LI  Y+K    ++A +VF  +PE ++V W ++I   S
Sbjct: 79  LGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYS 138

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
                 EAF  F +MR+  + P+     TVLS    +S     + +H      G+++DI 
Sbjct: 139 RTGRVPEAFSLFDEMRRQGIQPSS---VTVLSLLFGVSELAHVQCLHGCAILYGFMSDIN 195

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           + ++++ +Y KCG+I  +R+ FD M  ++ V+WN +I  YAQ G   E + L K M   G
Sbjct: 196 LSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQG 255

Query: 602 VKPDDITFVAILTACSHSGLVDVG 625
            +    TF ++L+  +  G + +G
Sbjct: 256 FEAGPQTFGSVLSVAASRGELKLG 279


>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
            [Brachypodium distachyon]
          Length = 1430

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 184/544 (33%), Positives = 283/544 (52%), Gaps = 73/544 (13%)

Query: 276  NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
            N+LL  +A+ G    A  +F  +P+    S+N +IA   Q  +   A+  L  M +  F 
Sbjct: 830  NALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFV 889

Query: 336  PDEVTSINMLVACVRSGDIKTG-----------------------------------REM 360
             +  +  + L AC    D +TG                                   R +
Sbjct: 890  LNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRV 949

Query: 361  FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
            F++MP  ++ SWN++++ Y Q+    EA+ LF  M   G  PD  TLA ++S+CA +   
Sbjct: 950  FEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAAD 1009

Query: 421  ESGKQVHAASLKTASHIDNYVAS-GLIGIYSKCQRN------------------------ 455
              G+QVHA  +K+    ++ V S  L+ +Y+KC R                         
Sbjct: 1010 REGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITG 1069

Query: 456  -------ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
                   E A+ VF ++ E +++ WN +IA  + N  + EA   F ++++  ++PT +++
Sbjct: 1070 YARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTY 1129

Query: 509  ATVLSSCAKLSSSFQGRQVHAQIEKDGYV------NDIFVGSALIEMYCKCGDIYGARQF 562
              VL++C  ++    G+Q H  + K+G+       +D+FVG++L++MY K G I    + 
Sbjct: 1130 GNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKV 1189

Query: 563  FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
            F+ M  ++ V+WN MI G+AQNG   +A+ L++ M+ S   PD +T + +L+AC HSGLV
Sbjct: 1190 FERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLV 1249

Query: 623  DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            + G   F SM  DHG+ P  DHYTCMID LGRAGH  E E LI EM  + D V+W  LL 
Sbjct: 1250 EEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLG 1309

Query: 683  SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
            SCRLH NV + + AA +LF LDP+NS PY LL+N+Y+ LG+W D+  VR  M    + K 
Sbjct: 1310 SCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQ 1369

Query: 743  PAYS 746
            P  S
Sbjct: 1370 PGCS 1373



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 188/647 (29%), Positives = 322/647 (49%), Gaps = 57/647 (8%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A +LFD MP R+  SWN +I+A  R G   +ALS+++ M++ G  P   T+ASV      
Sbjct: 104 ARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAE 163

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
            LD+   R+ HG + K     N+ +  AL+ +Y  C     A   F+++ EPN +++  +
Sbjct: 164 CLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVI 223

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           +           A++MF  M+   V     ++S  +  C R+   +E             
Sbjct: 224 VRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLAC-RDNNALE------------- 269

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G+ +H   ++ G+E  +H+ +S++DMYAK G MD+A+ +F+  P + +V    +++G
Sbjct: 270 --EGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSG 327

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSW 372
                                           L +C R  D K    +F+ M   ++ SW
Sbjct: 328 --------------------------------LASCGRIADAK---RVFEGMKERNLVSW 352

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           NAML+ Y +S +   A+ LF++M+    + D  TL  +LS+C  +  +  G++VHA ++K
Sbjct: 353 NAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIK 412

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERV--FHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
                   + + L+ +YSKC     AER+  F    E D   WNS+I+G   +S+   A 
Sbjct: 413 CGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAAL 472

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
               +M Q+E+ P Q +F++ L++CA +    QG Q+HA + + GY  D  + S LI+MY
Sbjct: 473 YALTKM-QSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMY 531

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
           CKC     + + F+    ++ + WN MI G A +G G+  + L+ +M   G+K D +TF+
Sbjct: 532 CKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFL 591

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
             L +C   G V +G   F ++ +D  + P ++HY CMI+ LG+ G   E E  ++ MP 
Sbjct: 592 GALVSCISEGHVRLGRSYF-TLMMDESIIPRIEHYECMIELLGKHGCMVELEDFVEHMPF 650

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
           +    +W  +   CR + N +L +RAA+ +   +P    P   +A +
Sbjct: 651 EPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLT--PVQFVATV 695



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 251/546 (45%), Gaps = 95/546 (17%)

Query: 15   LRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAY 74
            L++    +TFL N L+  Y++      A+ +FD++PH + +S+NA+LSA  +      A 
Sbjct: 787  LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846

Query: 75   KLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALL 134
             LF  +P+ +  S+N +I+AL ++     AL     M  + FV    + AS   A  A  
Sbjct: 847  ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906

Query: 135  DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
            D   G + H LV K    K++Y+ +ALL +YAKC W + A  VFE M E N V++ ++++
Sbjct: 907  DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLIT 966

Query: 195  GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
               +   V EAL +F  M++     D V+L+SV+  CA    G+ +D             
Sbjct: 967  CYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACA----GLAAD------------R 1010

Query: 255  HGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNG--------------------------- 286
             G+QVH   +K   F  D+ LSN+L+DMYAK G                           
Sbjct: 1011 EGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGY 1070

Query: 287  ----DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
                +++ A+++FS + E++V++WNV+IA Y Q  +  +A+ L  R+K     P   T  
Sbjct: 1071 ARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYG 1130

Query: 343  NMLVAC-----------------------------------------VRSGDIKTGREMF 361
            N+L AC                                         +++G I  G ++F
Sbjct: 1131 NVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVF 1190

Query: 362  DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
            + M +    SWNAM+  ++Q+   K+A+ LF  M      PD  T+  +LS+C   G++E
Sbjct: 1191 ERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVE 1250

Query: 422  SGKQVHAASLKTASHI---DNYVASGLIGIYSKC-QRNELAERVFHRIPELDIVCWNSMI 477
             G++   +  +    I   D+Y    +I +  +     E+ E +     E D V W S++
Sbjct: 1251 EGRRYFRSMTEDHGIIPSQDHYTC--MIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLL 1308

Query: 478  AGLSLN 483
                L+
Sbjct: 1309 GSCRLH 1314



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/412 (33%), Positives = 212/412 (51%), Gaps = 39/412 (9%)

Query: 45   LFDKMPH-KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
            L  K PH KD+Y  +A+L    K +  E A ++F+ MPERN+VSWN+LI+   +NG   +
Sbjct: 917  LVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGE 976

Query: 104  ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALL 162
            AL ++  M   GFVP  +TLASV  A   L     GR+ H  V+K     +++ ++NAL+
Sbjct: 977  ALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALV 1036

Query: 163  SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
             +YAKCG T+ A  VF+ M+  + V+ T++++G A++  V +A  +F  M+ K V    +
Sbjct: 1037 DMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNV----I 1092

Query: 223  SLSSVLGVCAREGCGVES-DVFAQSDNKFSRNVH------------------GQQVHCLT 263
            + + ++   A+ G   E+  +F +   +     H                  GQQ H   
Sbjct: 1093 AWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHV 1152

Query: 264  IKLGF------EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
            +K GF      E+D+ + NSL+DMY K G +D    +F  +  R  VSWN MI G+ Q  
Sbjct: 1153 LKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNG 1212

Query: 318  QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSW 372
            ++  A+ L +RM      PD VT I +L AC  SG ++ GR  F SM       PS   +
Sbjct: 1213 RAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHY 1272

Query: 373  NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
              M+    ++ + KE  +L +EM    ++PD    A +L SC     +E G+
Sbjct: 1273 TCMIDLLGRAGHLKEVEELIKEMS---MEPDAVLWASLLGSCRLHKNVEMGE 1321



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 164/670 (24%), Positives = 278/670 (41%), Gaps = 124/670 (18%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
           TFL NR IE  + C +   A+ LFD MP +D  SWNAI++A                   
Sbjct: 85  TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASS----------------- 127

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
                         R G   +ALS+++ M++ G  P   T+ASV       LD+   R+ 
Sbjct: 128 --------------RAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAECLDLCGARQL 173

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           HG + K     N+ +  AL+ +Y  C     A   F+++ EPN +++  ++         
Sbjct: 174 HGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMG 233

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
             A++MF  M+   V     ++S  +  C R+   +E                G+ +H  
Sbjct: 234 DMAVDMFFRMLSAGVRPLGYTVSHAVLAC-RDNNALE---------------EGRCIHAF 277

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP----------------------- 299
            ++ G+E  +H+ +S++DMYAK G MD+A+ +F+  P                       
Sbjct: 278 VLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADA 337

Query: 300 --------ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
                   ER++VSWN M+ GY +    T A+ L Q+M+    E D +T  ++L AC   
Sbjct: 338 KRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGI 397

Query: 352 GDIKTGRE-------------------------------------MFDSMPSPSVSSWNA 374
            DI  G E                                     +F+        SWN+
Sbjct: 398 LDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNS 457

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           ++S Y +    + A+    +MQ   V P+++T +  L++CA + +L+ G Q+HA  ++  
Sbjct: 458 LISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKG 516

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             ID+ + S LI +Y KC++ + + R+F   P  D++ WNSMI G + +         F 
Sbjct: 517 YEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFD 576

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           +M++  +     +F   L SC        GR     +  +  +  I     +IE+  K G
Sbjct: 577 EMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDESIIPRIEHYECMIELLGKHG 636

Query: 555 DIYGARQFFDMM-HGKNTVTWNEMI---HGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            +     F + M     T  W  +      Y     G+ A +   D  ++ + P  + FV
Sbjct: 637 CMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCIND--SNPLTP--VQFV 692

Query: 611 AILTACSHSG 620
           A +   S+ G
Sbjct: 693 ATVDYESNDG 702



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 180/365 (49%), Gaps = 19/365 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA +LR+G      + + ++++Y+KC    +AQ LF+  P KD+    +I+S    
Sbjct: 271 GRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLAS 330

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +  A ++F+ M ERN+VSWN +++  +R+     AL ++ +M  E      ITL SV
Sbjct: 331 CGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSV 390

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA--VPVFEEMSEP 184
             A T +LD+  G   H   IK G   +  + NAL+ +Y+KCG  + A  + +FE  SE 
Sbjct: 391 LSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSER 450

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +  ++ +++SG  +      AL     M +  V+ +  + SS L  CA        ++F 
Sbjct: 451 DSYSWNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACA--------NIFL 501

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G Q+H   I+ G+E D  L + L+DMY K    D +  IF   P R V+
Sbjct: 502 LK--------QGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVI 553

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
            WN MI G     +    ++L   M+  G + D VT +  LV+C+  G ++ GR  F  M
Sbjct: 554 LWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLM 613

Query: 365 PSPSV 369
              S+
Sbjct: 614 MDESI 618



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 138/236 (58%), Gaps = 7/236 (2%)

Query: 7    GKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ +HA ++++  F +D  L N L+++Y+KC  T +A+ +FD+M  + + S  ++++   
Sbjct: 1012 GRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYA 1071

Query: 66   KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +S ++E A  +F +M E+NV++WN LI+A  +NG EE+AL ++ ++  E   PTH T  +
Sbjct: 1072 RSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGN 1131

Query: 126  VFKASTALLDVEHGRRCHGLVIK------IGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
            V  A   + D++ G++ H  V+K       G + +++V N+L+ +Y K G       VFE
Sbjct: 1132 VLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFE 1191

Query: 180  EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
             M+  + V++ AM+ G A+  R  +AL +F  M+    S DSV++  VL  C   G
Sbjct: 1192 RMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSG 1247



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 181/384 (47%), Gaps = 44/384 (11%)

Query: 341 SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
           +I  L AC   G +   RE+FD MP     SWNA++++ S++ +  EA+ LF  M   G+
Sbjct: 91  AIESLAAC---GSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGI 147

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           +P   T+A +LS CA    L   +Q+H    K     +  + + L+ +Y  C     A R
Sbjct: 148 RPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARR 207

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSL-DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            F  I E + + WN ++    L  + D+   MFF+ +    + P  ++ +  + +C   +
Sbjct: 208 AFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAG-VRPLGYTVSHAVLACRDNN 266

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK--------------------------- 552
           +  +GR +HA + + GY + + V S++++MY K                           
Sbjct: 267 ALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVS 326

Query: 553 ----CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
               CG I  A++ F+ M  +N V+WN M+ GY ++     A+ L++ M     + D IT
Sbjct: 327 GLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAIT 386

Query: 609 FVAILTACSHSGLVDVGV-EIFNSMQLDHGV--EPILDHYTCMIDCLGRAGHFHEAE-ML 664
             ++L+AC  +G++D+G  E  ++  +  G    PIL +   ++    + G    AE +L
Sbjct: 387 LGSVLSAC--TGILDIGKGEEVHAFAIKCGFFSSPILKN--ALVRMYSKCGCLRSAERLL 442

Query: 665 IDEMPCKDDPVIWEVLLSSCRLHA 688
           + EM  + D   W  L+S    H+
Sbjct: 443 LFEMGSERDSYSWNSLISGYERHS 466



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 156/317 (49%), Gaps = 10/317 (3%)

Query: 407  LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
            L  ++S+ A +G L   ++V         H + +  + L+  +++  R   A  +FH IP
Sbjct: 798  LNTLVSAYARLGRLPDARRV----FDEIPHPNTFSYNALLSAHARLGRPADARALFHAIP 853

Query: 467  ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
            + D   +N++IA L+ +S   +A +F   M  ++     +SFA+ LS+CA    S  G Q
Sbjct: 854  DPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQ 913

Query: 527  VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
            VHA + K  +  D+++GSAL++MY KC     AR+ F+ M  +N V+WN +I  Y QNG 
Sbjct: 914  VHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGP 973

Query: 587  GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
              EA+ L+  M+ +G  PD++T  ++++AC+       G ++   +         +    
Sbjct: 974  VGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSN 1033

Query: 647  CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV-LLSSCRLHANVRLAKRAAEELFRLDP 705
             ++D   + G    A  + D M  +   V+ E  L++     ANV  A+    ++     
Sbjct: 1034 ALVDMYAKCGRTRAARCVFDRMASRS--VVSETSLITGYARSANVEDAQMVFSQMVE--- 1088

Query: 706  KNSAPYSLLANIYSSLG 722
            KN   +++L   Y+  G
Sbjct: 1089 KNVIAWNVLIAAYAQNG 1105



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 200/487 (41%), Gaps = 116/487 (23%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
             + LH HI +     +  L   L+++Y  C     A+  FD +   +  SWN I+    
Sbjct: 169 GARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVR--- 225

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                   Y L                      G+ + A+ ++ +M + G  P   T++ 
Sbjct: 226 -------RYHL---------------------AGMGDMAVDMFFRMLSAGVRPLGYTVSH 257

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA------VP--- 176
              A      +E GR  H  V++ G + +++V ++++ +YAKCG    A       P   
Sbjct: 258 AVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKD 317

Query: 177 ----------------------VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
                                 VFE M E N V++ AM++G  ++  +  AL +F+ M +
Sbjct: 318 MVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQ 377

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
           +    D+++L SVL  C     G+  D+             G++VH   IK GF +   L
Sbjct: 378 ETREFDAITLGSVLSACT----GI-LDIG-----------KGEEVHAFAIKCGFFSSPIL 421

Query: 275 SNSLLDMYAKNGDMDSAE--VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            N+L+ MY+K G + SAE  ++F    ER   SWN +I+GY +   S  A+  L +M+S 
Sbjct: 422 KNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQS- 480

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGRE--------------------------------- 359
              P++ T  + L AC     +K G +                                 
Sbjct: 481 EVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYS 540

Query: 360 --MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
             +F++ PS  V  WN+M+   + S   +  + LF EMQ +G+K D  T    L SC + 
Sbjct: 541 IRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISE 600

Query: 418 GILESGK 424
           G +  G+
Sbjct: 601 GHVRLGR 607



 Score = 39.7 bits (91), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVR 592
           K  +V + F+ + L+  Y + G +  AR+ FD +   NT ++N ++  +A+ G   +A  
Sbjct: 788 KSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARA 847

Query: 593 LYKDMIASGVKPDDITFVAILTA 615
           L+  +      PD  ++ A++ A
Sbjct: 848 LFHAI----PDPDQCSYNAVIAA 866


>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 679

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 210/691 (30%), Positives = 353/691 (51%), Gaps = 79/691 (11%)

Query: 49  MPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE-----RNVVSWNNLISALVRNGLEEK 103
           M    +  ++ ILS+  ++ +L     L    P+     R+  SW   +    R+ L  +
Sbjct: 1   MSSHALQPFSPILSSSAQTHELPTKKFLSHSPPKPISQSRSQASWIESLRFNTRSNLFRE 60

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALL 162
           A+S Y  M   G  P       V KA T L D+  G++ H  V+K G + + + +AN+L+
Sbjct: 61  AISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSLV 120

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
           + Y KC        VF+ ++E + V++ +++S   +      ALE FR M+ + +   S 
Sbjct: 121 NFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSF 180

Query: 223 SLSSVLGVCA--REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
           +L S +  C+  R+  G+                 G+Q+H    + G  +    +N+L+ 
Sbjct: 181 TLVSPVIACSNLRKHEGLRL---------------GKQIHGYCFRNGHWSTF-TNNALMT 224

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MYA  G +D A+ +F    +R+++SWN MI+ + Q  +  +A+  L+ M   G +PD VT
Sbjct: 225 MYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVT 284

Query: 341 SINMLVAC----------------VRSGD--------------------IKTGREMFDSM 364
             ++L AC                +RSGD                    + +GR +FD +
Sbjct: 285 LASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGI 344

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESG 423
                  WNAM++ Y+Q+E+ ++A+ LF EM    G+ P+ TT+A I+ + A      S 
Sbjct: 345 LERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSK 404

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           + +H   +K     D YV + L+ +YS+ ++ E+++ +F  +   DIV WN+MI G  ++
Sbjct: 405 ESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVIS 464

Query: 484 SLDIEAFMFFKQM-------------RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
               +A +   +M             +Q    P   +  TVL  CA L++  +G+++HA 
Sbjct: 465 GCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAY 524

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
             ++   +++ VGSAL++MY KCG +  +R+ FD M  KN +TWN ++  Y  +G G+EA
Sbjct: 525 AVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEA 584

Query: 591 VRLYKDMIASG-----VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
           + L+KDM+A G     VKP ++T +AIL ACSHSG+VD G+++F+ M+ DHG+EP  DHY
Sbjct: 585 LELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDHY 644

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
            C+ D LGRAG   +A   I+ MP   D + 
Sbjct: 645 ACVADLLGRAGKVEQAYDFINTMPSDFDKLF 675



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 243/500 (48%), Gaps = 59/500 (11%)

Query: 256 GQQVHCLTIKLGFEAD-LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           G+Q+H   +K G+E+  + ++NSL++ Y K  ++D    +F  + ER +VSWN +I+ + 
Sbjct: 96  GKQIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFC 155

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------------VRSGDIK 355
           +  +   A+E  + M +   EP   T ++ ++AC                    R+G   
Sbjct: 156 RAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWS 215

Query: 356 T------------------GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
           T                   + +F      ++ SWN M+SS+SQ+E   EA+   R M  
Sbjct: 216 TFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVL 275

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN-YVASGLIGIYSKCQRNE 456
            GVKPD  TLA +L +C+ + +L +GK++HA +L++   I+N +V S L+ +Y  C +  
Sbjct: 276 EGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVG 335

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQFSFATVLSSC 515
              RVF  I E     WN+MIAG + N  D +A M F +M     + P   + A+++ + 
Sbjct: 336 SGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPAS 395

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           A+  S F    +H  + K     D +V +AL++MY +   +  ++  FD M  ++ V+WN
Sbjct: 396 ARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWN 455

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASG-------------VKPDDITFVAILTACSHSGLV 622
            MI GY  +G  ++A+ +  +M  +               KP+ IT + +L  C+    +
Sbjct: 456 TMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAAL 515

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
             G EI ++  + + +   +   + ++D   + G  + +  + D+MP K + + W V++ 
Sbjct: 516 AKGKEI-HAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIK-NVITWNVIVM 573

Query: 683 SCRLHANVRLAKRAAEELFR 702
           +  +H N       A ELF+
Sbjct: 574 AYGMHGN----GEEALELFK 589



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 258/588 (43%), Gaps = 109/588 (18%)

Query: 7   GKLLHAHILRNGLFDDTF-LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK +HAH+++ G    +  + N L+  Y KC+       +FD++  +D+ SWN+++SA C
Sbjct: 96  GKQIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFC 155

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++ + E                                AL  +  M  E   P+  TL S
Sbjct: 156 RAQEWEL-------------------------------ALEAFRFMLAEDLEPSSFTLVS 184

Query: 126 VFKASTALLDVEH---GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
              A + L   E    G++ HG   + G   + +  NAL+++YA  G    A  +F+   
Sbjct: 185 PVIACSNLRKHEGLRLGKQIHGYCFRNG-HWSTFTNNALMTMYANLGRLDDAKFLFKLFE 243

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-EGCGVESD 241
           + N +++  M+S  ++ +R VEAL   R M+ + V  D V+L+SVL  C+  E  G    
Sbjct: 244 DRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGT--- 300

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                         G+++H   ++ G    +  + ++L+DMY   G + S   +F  + E
Sbjct: 301 --------------GKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILE 346

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSINMLVACVRSGD------ 353
           R    WN MIAGY Q     KA+ L   M +  G  P+  T  +++ A  R         
Sbjct: 347 RKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKES 406

Query: 354 -----------------------------IKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                        ++  + +FDSM    + SWN M++ Y  S  
Sbjct: 407 IHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGC 466

Query: 385 HKEAIKLFREMQF--RGV-----------KPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           + +A+ +  EMQ    G+           KP+  TL  +L  CA++  L  GK++HA ++
Sbjct: 467 YNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAV 526

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           + A   +  V S L+ +Y+KC    L+ RVF ++P  +++ WN ++    ++    EA  
Sbjct: 527 RNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALE 586

Query: 492 FFKQM-----RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
            FK M        E+ PT+ +   +L++C+      +G ++  +++ D
Sbjct: 587 LFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDD 634


>gi|242038427|ref|XP_002466608.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
 gi|241920462|gb|EER93606.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
          Length = 752

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 202/623 (32%), Positives = 325/623 (52%), Gaps = 84/623 (13%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           +K++     ++    K G  K AV ++E     +   FTAM++G  + +   +A  +FR 
Sbjct: 182 EKSVVSYTTMVDALMKRGSVKDAVKLYERCPLYSVAFFTAMIAGFVRNELHKDAFPVFRK 241

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEA 270
           M+R +V  + V+L  V+  C   G   E D+                V  L IK   FE 
Sbjct: 242 MLRCSVRPNVVTLICVIKACVGAG---EFDL-------------AMGVVGLAIKWNLFEK 285

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
            + + NSL+ +Y + GD  +A  +F ++  R VVSW  ++  Y +               
Sbjct: 286 SIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYAEL-------------- 331

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                GD++  R + D+MP  +  SW+ +++ + Q  +  EA+K
Sbjct: 332 ---------------------GDLEGARRVLDAMPERNEVSWSTLIARHEQKGDSAEALK 370

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           L+ +M   G +P+ +  + +LS+CA +  L  G ++HA +LK       +V+S LI +Y 
Sbjct: 371 LYSQMLAEGCRPNISCFSSVLSACATLHDLRGGTRIHANALKMGFSSSLFVSSSLIDMYC 430

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-------------- 496
           KC++   A+R+F+ +PE + VCWNS+I+G S N   +EA   FK+M              
Sbjct: 431 KCKQCTDAQRIFNSLPEKNTVCWNSLISGYSWNGKMVEAEELFKKMPARNAASWNTMISG 490

Query: 497 -RQNEMY----------------PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
             +N  +                P + + ++VL +CA L S   G+ VHA+I K G  ++
Sbjct: 491 YAENRRFGDALNYFCAMLASGQIPGEITLSSVLLACANLCSLEMGKMVHAEIVKLGIEDN 550

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           IF+G+AL +MY K GD+  +R+ F  M  KN +TW  M+ G A+NG+ +E++ L+++MIA
Sbjct: 551 IFMGTALSDMYAKSGDLDSSRRMFYQMPEKNNITWTAMVQGLAENGFAEESILLFENMIA 610

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
           + + P++ TF+AIL ACSH GLV+  +  F +MQ  HG+ P   HYTCM+D L RAG   
Sbjct: 611 NRIAPNEHTFLAILFACSHCGLVEQAIHYFETMQA-HGIPPKDKHYTCMVDVLARAGRLP 669

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           EAE L+ ++P K D   W  LLS+C  + N  + +RAA++L  L+  N+A Y LL+N+Y+
Sbjct: 670 EAEELLMKVPSKLDTSSWSSLLSACNTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYA 729

Query: 720 SLGRWDDLRAVRELMSENCIVKD 742
           S G+W D    R LM    + KD
Sbjct: 730 SCGKWKDAAETRILMQGPRLKKD 752



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 163/663 (24%), Positives = 286/663 (43%), Gaps = 141/663 (21%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYS----------------------------------K 35
           LHAH LR+GL  D  + + L+  Y+                                  K
Sbjct: 107 LHAHTLRSGLAADRSVASNLLTAYAAFARAADRDRAFRDCVSADAASSFTYDFMVSEHVK 166

Query: 36  CNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISAL 95
             +  SA+ LFD MP K + S+  ++ A  K   ++ A KL++  P  +V  +  +I+  
Sbjct: 167 AGDIASARRLFDGMPEKSVVSYTTMVDALMKRGSVKDAVKLYERCPLYSVAFFTAMIAGF 226

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL-DKN 154
           VRN L + A  V+ KM      P  +TL  V KA     + +      GL IK  L +K+
Sbjct: 227 VRNELHKDAFPVFRKMLRCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAIKWNLFEKS 286

Query: 155 IYVANALLSLYAKCG-------------------WT------------KHAVPVFEEMSE 183
           I V N+L++LY + G                   WT            + A  V + M E
Sbjct: 287 IEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYAELGDLEGARRVLDAMPE 346

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            NEV+++ +++   +     EAL+++  M+ +    +    SSVL  CA           
Sbjct: 347 RNEVSWSTLIARHEQKGDSAEALKLYSQMLAEGCRPNISCFSSVLSACA----------- 395

Query: 244 AQSDNKFSRNVH----GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                     +H    G ++H   +K+GF + L +S+SL+DMY K      A+ IF++LP
Sbjct: 396 ---------TLHDLRGGTRIHANALKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLP 446

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           E++ V WN +I+GY    +  +A EL ++M                              
Sbjct: 447 EKNTVCWNSLISGYSWNGKMVEAEELFKKM------------------------------ 476

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                P+ + +SWN M+S Y+++    +A+  F  M   G  P   TL+ +L +CA +  
Sbjct: 477 -----PARNAASWNTMISGYAENRRFGDALNYFCAMLASGQIPGEITLSSVLLACANLCS 531

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           LE GK VHA  +K     + ++ + L  +Y+K    + + R+F+++PE + + W +M+ G
Sbjct: 532 LEMGKMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRMFYQMPEKNNITWTAMVQG 591

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS------SSFQGRQVHAQIEK 533
           L+ N    E+ + F+ M  N + P + +F  +L +C+           F+  Q H    K
Sbjct: 592 LAENGFAEESILLFENMIANRIAPNEHTFLAILFACSHCGLVEQAIHYFETMQAHGIPPK 651

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHG---YAQNGYGDE 589
           D +       + ++++  + G +  A +    +  K +T +W+ ++     Y     G+ 
Sbjct: 652 DKHY------TCMVDVLARAGRLPEAEELLMKVPSKLDTSSWSSLLSACNTYRNKEIGER 705

Query: 590 AVR 592
           A +
Sbjct: 706 AAK 708



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 218/474 (45%), Gaps = 81/474 (17%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N LI LY +  +  +A  +FD M  +D+ SW A+L    +  DLE A ++ D MPERN V
Sbjct: 291 NSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYAELGDLEGARRVLDAMPERNEV 350

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW+ LI+   + G   +AL +Y++M  EG  P     +SV  A   L D+  G R H   
Sbjct: 351 SWSTLIARHEQKGDSAEALKLYSQMLAEGCRPNISCFSSVLSACATLHDLRGGTRIHANA 410

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K+G   +++V+++L+ +Y KC     A  +F  + E N V + +++SG +   ++VEA 
Sbjct: 411 LKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLPEKNTVCWNSLISGYSWNGKMVEAE 470

Query: 207 EMFRLM-IRKAVSIDS------------------------------VSLSSVLGVCAREG 235
           E+F+ M  R A S ++                              ++LSSVL  CA   
Sbjct: 471 ELFKKMPARNAASWNTMISGYAENRRFGDALNYFCAMLASGQIPGEITLSSVLLACANL- 529

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
           C +E                G+ VH   +KLG E ++ +  +L DMYAK+GD+DS+  +F
Sbjct: 530 CSLE---------------MGKMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRMF 574

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
             +PE++ ++W  M+ G  +   + ++I L + M +    P+E T + +L AC   G + 
Sbjct: 575 YQMPEKNNITWTAMVQGLAENGFAEESILLFENMIANRIAPNEHTFLAILFACSHCGLV- 633

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
                                         ++AI  F  MQ  G+ P       ++   A
Sbjct: 634 ------------------------------EQAIHYFETMQAHGIPPKDKHYTCMVDVLA 663

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
             G L   +++    +K  S +D    S L+   +  +  E+ ER   ++ EL+
Sbjct: 664 RAGRLPEAEEL---LMKVPSKLDTSSWSSLLSACNTYRNKEIGERAAKKLHELE 714



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 213/467 (45%), Gaps = 100/467 (21%)

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           ++  + K GD+ SA  +F  +PE+SVVS+  M+                           
Sbjct: 160 MVSEHVKAGDIASARRLFDGMPEKSVVSYTTMVD-------------------------- 193

Query: 338 EVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                    A ++ G +K   ++++  P  SV+ + AM++ + ++E HK+A  +FR+M  
Sbjct: 194 ---------ALMKRGSVKDAVKLYERCPLYSVAFFTAMIAGFVRNELHKDAFPVFRKMLR 244

Query: 398 RGVKPDRTTLAIILSSCA-------AMGIL---------ESGKQVHAASLK--------T 433
             V+P+  TL  ++ +C        AMG++         E   +VH + +          
Sbjct: 245 CSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAIKWNLFEKSIEVHNSLITLYLRMGDAA 304

Query: 434 ASH-------IDNYVA-SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           A+H       + + V+ + L+ +Y++    E A RV   +PE + V W+++IA       
Sbjct: 305 AAHRVFDDMEVRDVVSWTALLDVYAELGDLEGARRVLDAMPERNEVSWSTLIARHEQKGD 364

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             EA   + QM      P    F++VLS+CA L     G ++HA   K G+ + +FV S+
Sbjct: 365 SAEALKLYSQMLAEGCRPNISCFSSVLSACATLHDLRGGTRIHANALKMGFSSSLFVSSS 424

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD--------- 596
           LI+MYCKC     A++ F+ +  KNTV WN +I GY+ NG   EA  L+K          
Sbjct: 425 LIDMYCKCKQCTDAQRIFNSLPEKNTVCWNSLISGYSWNGKMVEAEELFKKMPARNAASW 484

Query: 597 ----------------------MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
                                 M+ASG  P +IT  ++L AC++   +++G ++ ++  +
Sbjct: 485 NTMISGYAENRRFGDALNYFCAMLASGQIPGEITLSSVLLACANLCSLEMG-KMVHAEIV 543

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
             G+E  +   T + D   ++G    +  +  +MP K++ + W  ++
Sbjct: 544 KLGIEDNIFMGTALSDMYAKSGDLDSSRRMFYQMPEKNN-ITWTAMV 589



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 178/360 (49%), Gaps = 27/360 (7%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G  +HA+ L+ G     F+ + LI++Y KC     AQ +F+ +P K+   WN+++S   
Sbjct: 402 GGTRIHANALKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLPEKNTVCWNSLISGYS 461

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +  +  A +LF +MP RN  SWN +IS    N     AL+ +  M   G +P  ITL+S
Sbjct: 462 WNGKMVEAEELFKKMPARNAASWNTMISGYAENRRFGDALNYFCAMLASGQIPGEITLSS 521

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   L  +E G+  H  ++K+G++ NI++  AL  +YAK G    +  +F +M E N
Sbjct: 522 VLLACANLCSLEMGKMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRMFYQMPEKN 581

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +T+TAM+ GLA+     E++ +F  MI   ++ +  +  ++L  C+   CG    +  Q
Sbjct: 582 NITWTAMVQGLAENGFAEESILLFENMIANRIAPNEHTFLAILFACSH--CG----LVEQ 635

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER-SVV 304
           + + F       Q H +  K     D H +  ++D+ A+ G +  AE +   +P +    
Sbjct: 636 AIHYF----ETMQAHGIPPK-----DKHYT-CMVDVLARAGRLPEAEELLMKVPSKLDTS 685

Query: 305 SWNVMIAG---YGQK---YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
           SW+ +++    Y  K    ++ K +  L++  + G+    V   NM  +C +  D    R
Sbjct: 686 SWSSLLSACNTYRNKEIGERAAKKLHELEKDNTAGY----VLLSNMYASCGKWKDAAETR 741


>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
          Length = 656

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 200/619 (32%), Positives = 321/619 (51%), Gaps = 50/619 (8%)

Query: 140 RRCHGLVIKIGLDK------NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
           R C GL      D       ++ +    L+   K G    A+ +F+ M   N V +T++M
Sbjct: 27  RVCDGLCSAAAADNGCAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVM 86

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           SG  +  R   AL MF  M+   V+ +  + ++ L  CA  G                  
Sbjct: 87  SGCTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRA-------------- 132

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+QVH L ++ GF  D  + + L++MY++ G + +A+ +F  +    VV +  +I+ +
Sbjct: 133 --GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAF 190

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD------SMPSP 367
            +  +   A E L +M   G +P+E T   +L AC R      G+++         + S 
Sbjct: 191 CRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQ 246

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           SV S  A++  YS++E               GV P+   L+I+L +C ++G+   G+Q+H
Sbjct: 247 SVYSSTALIDFYSRNE---------------GVDPNEFALSIVLGACGSIGL---GRQLH 288

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
            +++K     D  V++ L+ +Y +    E  E + ++I   D+V W + I+    N    
Sbjct: 289 CSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGE 348

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           +A     QM      P  ++F++VLSSCA ++S  QG Q H    K G  ++I  G+ALI
Sbjct: 349 KAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALI 408

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
            MY KCG +  AR  FD+MH  +  +WN +IHG+AQ+G  ++A+ ++  M ++G+KPDD 
Sbjct: 409 NMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDS 468

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           TF+ +L  C+HSG+V+ G   F  M   +   P   HY CMID LGR G F EA  +I++
Sbjct: 469 TFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMIND 528

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
           MP + D +IW+ LL+SC+LH N+ + K AA+ L  L  ++SA Y L++NIY+  G W+D 
Sbjct: 529 MPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDA 588

Query: 728 RAVRELMSENCIVKDPAYS 746
           R VR  M E  + KD   S
Sbjct: 589 RKVRRRMDETGVKKDAGCS 607



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 238/492 (48%), Gaps = 50/492 (10%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H+  +R G   D ++ + LIE+YS+C +  +A+ +FD+M   D+  + +++SA C
Sbjct: 132 AGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFC 191

Query: 66  KSDDLEFAYKLFDEMPER----NVVSWNNLISALVR-----------NGLEEKALSVYNK 110
           ++ + E A +   +M ++    N  +   +++A  R             +  ++ SVY+ 
Sbjct: 192 RNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSS 251

Query: 111 MS-------NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
            +       NEG  P    L+ V  A  +   +  GR+ H   IK  L  +I V+NALLS
Sbjct: 252 TALIDFYSRNEGVDPNEFALSIVLGACGS---IGLGRQLHCSAIKHDLITDIRVSNALLS 308

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y + G  +    +  ++  P+ V++T  +S   +     +A+ +   M  +  + +  +
Sbjct: 309 MYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYA 368

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
            SSVL  CA        DV +           G Q HCL +KLG ++++   N+L++MY+
Sbjct: 369 FSSVLSSCA--------DVASLD--------QGMQFHCLALKLGCDSEICTGNALINMYS 412

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K G M SA + F  +    V SWN +I G+ Q   + KA+E+  +M+S G +PD+ T + 
Sbjct: 413 KCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLG 472

Query: 344 MLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           +L+ C  SG ++ G   F  M      +P+ S +  M+    ++    EA+++  +M F 
Sbjct: 473 VLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPF- 531

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
             +PD      +L+SC     L+ GK + A  L   S  D+     +  IY+     E A
Sbjct: 532 --EPDALIWKTLLASCKLHRNLDIGK-LAADRLMELSDRDSASYVLMSNIYAMHGEWEDA 588

Query: 459 ERVFHRIPELDI 470
            +V  R+ E  +
Sbjct: 589 RKVRRRMDETGV 600



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 228/500 (45%), Gaps = 84/500 (16%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           KS  L  A  LFD MP +NVV+W +++S   RNG  E AL+++  M   G  P      +
Sbjct: 60  KSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDFACNA 119

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A   L  +  G + H L ++ G   + ++ + L+ +Y++CG    A  VF+ M  P+
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPD 179

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-----------E 234
            V +T+++S   +      A E    M+++ +  +  +++++L  C R           +
Sbjct: 180 VVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIK 239

Query: 235 GCGVES----------DVFAQSD----NKFSRNV---------HGQQVHCLTIKLGFEAD 271
             G+ S          D +++++    N+F+ ++          G+Q+HC  IK     D
Sbjct: 240 KIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITD 299

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + +SN+LL MY + G ++  E + + +    +VSW   I+   Q     KAI LL +M S
Sbjct: 300 IRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHS 359

Query: 332 CGFEPDEVTSINMLVACV-----------------------------------RSGDIKT 356
            GF P+     ++L +C                                    + G + +
Sbjct: 360 EGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGS 419

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R  FD M +  V+SWN+++  ++Q  +  +A+++F +M+  G+KPD +T   +L  C  
Sbjct: 420 ARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNH 479

Query: 417 MGILESGKQVHAASLKTASHIDNYVASG-------LIGIYSKCQRNELAERVFHRIP-EL 468
            G++E G+      L     ID Y  +        +I +  +  R + A R+ + +P E 
Sbjct: 480 SGMVEEGE------LFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEP 533

Query: 469 DIVCWNSMIAGLSLN-SLDI 487
           D + W +++A   L+ +LDI
Sbjct: 534 DALIWKTLLASCKLHRNLDI 553


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 187/614 (30%), Positives = 332/614 (54%), Gaps = 65/614 (10%)

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS----LSSVLG 229
           A+ +F+EM++ +   +  M+ G       +EA++ +  M+   V  D+ +    + SV G
Sbjct: 83  ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
           + + E                     G+++H + IKLGF +D+++ NSL+ +Y K G   
Sbjct: 143 ISSLE--------------------EGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC- 348
            AE +F  +PER +VSWN MI+GY        ++ L + M  CGF+PD  ++++ L AC 
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242

Query: 349 ---------------VRS--------------------GDIKTGREMFDSMPSPSVSSWN 373
                          VRS                    G++     +F+ M   ++ +WN
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302

Query: 374 AMLSSYSQSENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
            M+  Y+++    +A   F++M +  G++PD  T   +L + A   ILE G+ +H  +++
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA---ILE-GRTIHGYAMR 358

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                   + + LI +Y +C + + AE +F R+ E +++ WNS+IA    N  +  A   
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           F+++  + + P   + A++L + A+  S  +GR++HA I K  Y ++  + ++L+ MY  
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           CGD+  AR+ F+ +  K+ V+WN +I  YA +G+G  +V L+ +MIAS V P+  TF ++
Sbjct: 479 CGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASL 538

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L ACS SG+VD G E F SM+ ++G++P ++HY CM+D +GR G+F  A+  ++EMP   
Sbjct: 539 LAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVP 598

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
              IW  LL++ R H ++ +A+ AAE++F+++  N+  Y LL N+Y+  GRW+D+  ++ 
Sbjct: 599 TARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKL 658

Query: 733 LMSENCIVKDPAYS 746
           LM    I +  + S
Sbjct: 659 LMESKGISRTSSRS 672



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 149/531 (28%), Positives = 267/531 (50%), Gaps = 50/531 (9%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           +E A +LFDEM + +   WN +I      GL  +A+  Y++M   G      T   V K+
Sbjct: 80  MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              +  +E G++ H +VIK+G   ++YV N+L+SLY K G    A  VFEEM E + V++
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            +M+SG         +L +F+ M++     D  S  S LG C        S V++     
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC--------SHVYSPK--- 248

Query: 250 FSRNVHGQQVHCLTIKLGFE-ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                 G+++HC  ++   E  D+ +  S+LDMY+K G++  AE IF+ + +R++V+WNV
Sbjct: 249 -----MGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303

Query: 309 MIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACV------------------ 349
           MI  Y +  + T A    Q+M +  G +PD +TSIN+L A                    
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLP 363

Query: 350 -------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                          G +K+   +FD M   +V SWN+++++Y Q+  +  A++LF+E+ 
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
              + PD TT+A IL + A    L  G+++HA  +K+    +  + + L+ +Y+ C   E
Sbjct: 424 DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLE 483

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            A + F+ I   D+V WNS+I   +++     +   F +M  + + P + +FA++L++C+
Sbjct: 484 DARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACS 543

Query: 517 KLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
                 +G +    ++++ G    I     ++++  + G+   A++F + M
Sbjct: 544 ISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 211/469 (44%), Gaps = 89/469 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA +++ G   D ++CN LI LY K                             C 
Sbjct: 149 GKKIHAMVIKLGFVSDVYVCNSLISLYMKLG---------------------------CA 181

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D    A K+F+EMPER++VSWN++IS  +  G    +L ++ +M   GF P   +  S 
Sbjct: 182 WD----AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSA 237

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDK-NIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A + +   + G+  H   ++  ++  ++ V  ++L +Y+K G   +A  +F  M + N
Sbjct: 238 LGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRN 297

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +  M+   A+  RV +A   F+ M                     E  G++ DV   
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKM--------------------SEQNGLQPDVITS 337

Query: 246 SD-NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            +    S  + G+ +H   ++ GF   + L  +L+DMY + G + SAEVIF  + E++V+
Sbjct: 338 INLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVI 397

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------------- 351
           SWN +IA Y Q  ++  A+EL Q +      PD  T  ++L A   S             
Sbjct: 398 SWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI 457

Query: 352 ----------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                 GD++  R+ F+ +    V SWN+++ +Y+     + ++
Sbjct: 458 VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISV 517

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
            LF EM    V P+++T A +L++C+  G+++ G + +  S+K    ID
Sbjct: 518 WLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE-YFESMKREYGID 565



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 182/397 (45%), Gaps = 56/397 (14%)

Query: 7   GKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK +H H +R+ +   D  +   ++++YSK      A+ +F+ M  ++I +WN ++    
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++  +  A+  F +M E+N                              G  P  IT  +
Sbjct: 310 RNGRVTDAFLCFQKMSEQN------------------------------GLQPDVITSIN 339

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  AS  L     GR  HG  ++ G   ++ +  AL+ +Y +CG  K A  +F+ M+E N
Sbjct: 340 LLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKN 395

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++ ++++   +  +   ALE+F+ +   ++  DS +++S+L   A      ES   ++
Sbjct: 396 VISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA------ESLSLSE 449

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+++H   +K  + ++  + NSL+ MYA  GD++ A   F+++  + VVS
Sbjct: 450 ----------GREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN +I  Y        ++ L   M +    P++ T  ++L AC  SG +  G E F+SM 
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                 P +  +  ML    ++ N   A +   EM F
Sbjct: 560 REYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPF 596



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 136/269 (50%), Gaps = 11/269 (4%)

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
           GI +  + V     K    +++   +  +  ++  +  E A ++F  + + D   WN MI
Sbjct: 43  GISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMI 102

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            G +   L IEA  F+ +M    +    F++  V+ S A +SS  +G+++HA + K G+V
Sbjct: 103 KGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFV 162

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           +D++V ++LI +Y K G  + A + F+ M  ++ V+WN MI GY   G G  ++ L+K+M
Sbjct: 163 SDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEM 222

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH-----YTCMIDCL 652
           +  G KPD  + ++ L ACSH     +G EI       H V   ++       T ++D  
Sbjct: 223 LKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC-----HAVRSRIETGDVMVMTSILDMY 277

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            + G    AE + + M  + + V W V++
Sbjct: 278 SKYGEVSYAERIFNGM-IQRNIVAWNVMI 305



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 46/297 (15%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + G+ +H + +R G      L   LI++Y +C    SA+ +FD+M             
Sbjct: 345 AILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA------------ 392

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                              E+NV+SWN++I+A V+NG    AL ++ ++ +   VP   T
Sbjct: 393 -------------------EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           +AS+  A    L +  GR  H  ++K     N  + N+L+ +YA CG  + A   F  + 
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + V++ +++   A       ++ +F  MI   V+ +  + +S+L  C+  G   E   
Sbjct: 494 LKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           + +S  +               + G +  +     +LD+  + G+  +A+     +P
Sbjct: 554 YFESMKR---------------EYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 188/594 (31%), Positives = 311/594 (52%), Gaps = 53/594 (8%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
           N++  N LL  Y+K G        FE++ + + VT+  ++ G + +  V  A++ +  M+
Sbjct: 71  NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130

Query: 214 RK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
           R  + ++  V+L ++L + +  G                    G+Q+H   IKLGFE+ L
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNG----------------HVSLGKQIHGQVIKLGFESYL 174

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            + + LL MYA  G +  A+ +F  L +R+ V +N ++ G                    
Sbjct: 175 LVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG-------------------- 214

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                       L+AC   G I+   ++F  M   SVS W AM+   +Q+   KEAI+ F
Sbjct: 215 ------------LLAC---GMIEDALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEAIECF 258

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           REM+ +G+K D+     +L +C  +G +  GKQ+HA  ++T      YV S LI +Y KC
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
           +    A+ VF R+ + ++V W +M+ G        EA   F  M+++ + P  ++    +
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           S+CA +SS  +G Q H +    G ++ + V ++L+ +Y KCGDI  + + F+ M+ ++ V
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +W  M+  YAQ G   E ++L+  M+  G+KPD +T   +++ACS +GLV+ G   F  M
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
             ++G+ P + HY+CMID   R+G   EA   I+ MP   D + W  LLS+CR   N+ +
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEI 558

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            K AAE L  LDP + A Y+LL++IY+S G+WD +  +R  M E  + K+P  S
Sbjct: 559 GKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQS 612



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/580 (26%), Positives = 283/580 (48%), Gaps = 68/580 (11%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K++H +I+R   + +TFL N ++  Y+   ++  A+ +FD++P  +++SWN +L A  K+
Sbjct: 26  KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP-THITLASV 126
             +      F+++P+R+ V+WN LI     +GL   A+  YN M  +     T +TL ++
Sbjct: 86  GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K S++   V  G++ HG VIK+G +  + V + LL +YA  G    A  VF  + + N 
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-------CGVE 239
           V + ++M GL     + +AL++FR M +     DSVS ++++   A+ G       C  E
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFRE 260

Query: 240 SDVFAQSDNKFSRNV------------HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
             V     +++                 G+Q+H   I+  F+  +++ ++L+DMY K   
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           +  A+ +F  + +++VVSW  M+ GYGQ  ++ +A+++   M+  G +PD  T    + A
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380

Query: 348 CV-----------------------------------RSGDIKTGREMFDSMPSPSVSSW 372
           C                                    + GDI     +F+ M      SW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAA 429
            AM+S+Y+Q     E I+LF +M   G+KPD  TL  ++S+C+  G++E G+   ++  +
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGL-SLNSLDI 487
                  I +Y  S +I ++S+  R E A R  + +P   D + W ++++   +  +L+I
Sbjct: 501 EYGIVPSIGHY--SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEI 558

Query: 488 EAFMFFKQMRQNEMYPTQFS-FATVLSSCAKLSSSFQGRQ 526
             +     +  +  +P  ++  +++ +S  K  S  Q R+
Sbjct: 559 GKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRR 598



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 209/428 (48%), Gaps = 26/428 (6%)

Query: 3   AHVA-GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
            HV+ GK +H  +++ G      + + L+ +Y+       A+ +F  +  ++   +N+++
Sbjct: 153 GHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLM 212

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   +E A +LF  M E++ VSW  +I  L +NGL ++A+  + +M  +G      
Sbjct: 213 GGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 271

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
              SV  A   L  +  G++ H  +I+     +IYV +AL+ +Y KC    +A  VF+ M
Sbjct: 272 PFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM 331

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + N V++TAM+ G  +T R  EA+++F  M R  +  D  +L   +  CA         
Sbjct: 332 KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA--------- 382

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    S    G Q H   I  G    + +SNSL+ +Y K GD+D +  +F+ +  R
Sbjct: 383 -------NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
             VSW  M++ Y Q  ++ + I+L  +M   G +PD VT   ++ AC R+G ++ G+  F
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495

Query: 362 DSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
             M S     PS+  ++ M+  +S+S   +EA++    M F    PD      +LS+C  
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPF---PPDAIGWTTLLSACRN 552

Query: 417 MGILESGK 424
            G LE GK
Sbjct: 553 KGNLEIGK 560



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 212/472 (44%), Gaps = 75/472 (15%)

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
           A++ +++ + +HG  +  L     F     L N+++  YA       A  +F  +P+ ++
Sbjct: 18  ARNQSRYVKMIHGNIIRALPYPETF-----LYNNIVHAYALMKSSTYARRVFDRIPQPNL 72

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
            SWN                                   N+L+A  ++G I      F+ 
Sbjct: 73  FSWN-----------------------------------NLLLAYSKAGLISEMESTFEK 97

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD--RTTLAIILSSCAAMGILE 421
           +P     +WN ++  YS S     A+K +  M  R    +  R TL  +L   ++ G + 
Sbjct: 98  LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFSANLTRVTLMTMLKLSSSNGHVS 156

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH------------------ 463
            GKQ+H   +K        V S L+ +Y+       A++VF+                  
Sbjct: 157 LGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLL 216

Query: 464 ------------RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
                       R  E D V W +MI GL+ N L  EA   F++M+   +   Q+ F +V
Sbjct: 217 ACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L +C  L +  +G+Q+HA I +  + + I+VGSALI+MYCKC  ++ A+  FD M  KN 
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           V+W  M+ GY Q G  +EAV+++ DM  SG+ PD  T    ++AC++   ++ G + F+ 
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ-FHG 395

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             +  G+   +     ++   G+ G   ++  L +EM  + D V W  ++S+
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 174/528 (32%), Positives = 285/528 (53%), Gaps = 36/528 (6%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ VH      G   +   + +L +MYAK      A  +F  +P R  V+WN ++AGY +
Sbjct: 244 GRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYAR 303

Query: 316 KYQSTKAIELLQRMKS-CGFEPDEVTSINMLVACV------------------------- 349
              +  A+ ++ RM+   G  PD VT +++L AC                          
Sbjct: 304 NGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVN 363

Query: 350 ----------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                     + G + + R++FD M   +  SWNAM+  Y+++ +  EA+ LF+ M   G
Sbjct: 364 VSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEG 423

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V     ++   L +C  +G L+ G++VH   ++     +  V + LI +Y KC+R +LA 
Sbjct: 424 VDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAA 483

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           +VF  +     V WN+MI G + N    +A   F +M+   + P  F+  +++ + A +S
Sbjct: 484 QVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADIS 543

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
              Q R +H    +     D++V +ALI+MY KCG +  AR  F+    ++ +TWN MIH
Sbjct: 544 DPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIH 603

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GY  +G G  AV L+++M +SG  P++ TF+++L+ACSH+GLVD G E F+SM+ D+G+E
Sbjct: 604 GYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLE 663

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P ++HY  M+D LGRAG  HEA   I +MP +    ++  +L +C+LH NV LA+ +A+ 
Sbjct: 664 PGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQR 723

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           +F L+P+    + LLANIY++   W D+  VR  M +  + K P +S+
Sbjct: 724 IFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSI 771



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 203/455 (44%), Gaps = 83/455 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA +   GL  +      L  +Y+KC     A+                       
Sbjct: 244 GRAVHAQLAARGLSPEALAATALANMYAKCRRPGDAR----------------------- 280

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLAS 125
                   ++FD MP R+ V+WN L++   RNGL E A+ +  +M  E G  P  +TL S
Sbjct: 281 --------RVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVS 332

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A      +   R  H   ++ G D+ + V+ A+L +Y KCG    A  VF+ M + N
Sbjct: 333 VLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRN 392

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM+ G A+     EAL +F+ M+ + V +  VS+ + L  C   G   E      
Sbjct: 393 SVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDE------ 446

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G++VH L +++G E+++++ N+L+ MY K    D A  +F  L  ++ VS
Sbjct: 447 ----------GRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVS 496

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WN MI G  Q   S  A+ L  RM+    +PD  T ++++ A                  
Sbjct: 497 WNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSI 556

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G +   R +F+S     V +WNAM+  Y    + K A++
Sbjct: 557 RLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVE 616

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           LF EM+  G  P+ TT   +LS+C+  G+++ G++
Sbjct: 617 LFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQE 651



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 234/501 (46%), Gaps = 54/501 (10%)

Query: 104 ALSVYNKMSN-EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALL 162
           AL+ +  MS   G  P   T  S+ K   A  D+  GR  H  +   GL      A AL 
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDS 221
           ++YAKC     A  VF+ M   + V + A+++G A+      A+ M  R+        D+
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDM 281
           V+L SVL  CA           AQ+          ++VH   ++ GF+  +++S ++LD+
Sbjct: 328 VTLVSVLPACAD----------AQALGAC------REVHAFAVRGGFDEQVNVSTAILDV 371

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
           Y K G +DSA  +F  + +R+ VSWN MI GY +   +T+A+ L +RM   G +  +V+ 
Sbjct: 372 YCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSV 431

Query: 342 INMLVACVRSGDIKTGR-----------------------------------EMFDSMPS 366
           +  L AC   G +  GR                                   ++FD +  
Sbjct: 432 LAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGY 491

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
            +  SWNAM+   +Q+ + ++A++LF  MQ   VKPD  TL  I+ + A +      + +
Sbjct: 492 KTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWI 551

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H  S++     D YV + LI +Y+KC R  +A  +F+   +  ++ WN+MI G   +   
Sbjct: 552 HGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSG 611

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSA 545
             A   F++M+ +   P + +F +VLS+C+      +G++  + +++D G    +     
Sbjct: 612 KVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGT 671

Query: 546 LIEMYCKCGDIYGARQFFDMM 566
           ++++  + G ++ A  F   M
Sbjct: 672 MVDLLGRAGKLHEAWSFIQKM 692



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 191/362 (52%), Gaps = 24/362 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            AIL   CK   ++ A K+FD M +RN VSWN +I     NG   +AL+++ +M  EG  
Sbjct: 366 TAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVD 425

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
            T +++ +   A   L  ++ GRR H L+++IGL+ N+ V NAL+++Y KC  T  A  V
Sbjct: 426 VTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQV 485

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+E+     V++ AM+ G  +     +A+ +F  M  + V  DS +L S++   A     
Sbjct: 486 FDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALA----- 540

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
              D+   SD   +R +HG      +I+L  + D+++  +L+DMYAK G +  A  +F++
Sbjct: 541 ---DI---SDPLQARWIHG-----YSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNS 589

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
             +R V++WN MI GYG       A+EL + MKS G  P+E T +++L AC  +G +  G
Sbjct: 590 ARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEG 649

Query: 358 REMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           +E F SM       P +  +  M+    ++    EA    ++M    ++P  +    +L 
Sbjct: 650 QEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP---MEPGISVYGAMLG 706

Query: 413 SC 414
           +C
Sbjct: 707 AC 708



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 209/455 (45%), Gaps = 55/455 (12%)

Query: 317 YQSTKAIELLQRMKSCGF---------------EPDEVTSINMLVACVRSGDIKTGREMF 361
           Y    A+ELL  ++SC F               EP    + N+L+   +    KT RE+ 
Sbjct: 104 YNYLLAVELLASVESCWFCSGCSPRADEKALVAEPQMRQTGNILIELEKKK--KTSRELA 161

Query: 362 D-------------SMPSPSVSSWNAM-------LSSYSQSENHKEAIKLFREMQ-FRGV 400
           +             S+PSP  ++ +A        L + +   + + A+  F  M    G 
Sbjct: 162 ECVGMLCSAASASSSLPSPITAATHAAPDDHHARLRAAASRSDLRGALAAFAAMSPASGS 221

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
            P   T   +L  CAA   L +G+ VHA         +   A+ L  +Y+KC+R   A R
Sbjct: 222 GPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARR 281

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAF-MFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           VF R+P  D V WN+++AG + N L   A  M  +   ++   P   +  +VL +CA   
Sbjct: 282 VFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQ 341

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +    R+VHA   + G+   + V +A++++YCKCG +  AR+ FD M  +N+V+WN MI 
Sbjct: 342 ALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIK 401

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GYA+NG   EA+ L+K M+  GV   D++ +A L AC   G +D G  + + + +  G+E
Sbjct: 402 GYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRV-HELLVRIGLE 460

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
             ++    +I    +      A  + DE+  K   V W  ++  C  + +   A R    
Sbjct: 461 SNVNVMNALITMYCKCKRTDLAAQVFDELGYKTR-VSWNAMILGCTQNGSSEDAVR---- 515

Query: 700 LF-RLDPKNSAPYSL--------LANIYSSL-GRW 724
           LF R+  +N  P S         LA+I   L  RW
Sbjct: 516 LFSRMQLENVKPDSFTLVSIIPALADISDPLQARW 550



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 151/368 (41%), Gaps = 35/368 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA+++  CK    + A ++FDE+  +  VSWN +I    +NG  E A+ ++++M  E   
Sbjct: 467 NALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVK 526

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   TL S+  A   + D    R  HG  I++ LD+++YV  AL+ +YAKCG    A  +
Sbjct: 527 PDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSL 586

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F    + + +T+ AM+ G         A+E+F  M       +  +  SVL  C+  G  
Sbjct: 587 FNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLV 646

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
            E   +  S               +    G E  +    +++D+  + G +  A      
Sbjct: 647 DEGQEYFSS---------------MKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQK 691

Query: 298 LP-ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE----VTSINMLVACVRSG 352
           +P E  +  +  M+           A E  QR+     EP+E    V   N+        
Sbjct: 692 MPMEPGISVYGAMLGACKLHKNVELAEESAQRIFE--LEPEEGVYHVLLANIYANASLWK 749

Query: 353 DIKTGREMFDSMPSPSVSSW------NAMLSSYSQSENHKEA-------IKLFREMQFRG 399
           D+   R   +         W      N + + YS S NH++A        KL  E++  G
Sbjct: 750 DVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVG 809

Query: 400 VKPDRTTL 407
             PD  ++
Sbjct: 810 YVPDTDSI 817


>gi|302789718|ref|XP_002976627.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
 gi|300155665|gb|EFJ22296.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
          Length = 734

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 214/721 (29%), Positives = 344/721 (47%), Gaps = 87/721 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +  +G+  DT+L N LI++Y  C     A+ +FD                   
Sbjct: 22  GMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIFD------------------- 62

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   KL D    RNV SW  ++SA  +NG   +AL +  +M  EG  P  +T   +
Sbjct: 63  --------KLID----RNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWI 110

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + L DVE GR+ H  ++ +G D +  V+ A+L +Y+KC     A  +F+ +   + 
Sbjct: 111 LGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDV 170

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++TA+++  ++  R   ALE+F  M    V  +  +  ++L  C         D     
Sbjct: 171 VSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTY------MDALEDG 224

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D  + R           I  G+ AD+ + ++ + MY++ G++  A+  F +L E+S  SW
Sbjct: 225 DKLYKR----------AISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSW 274

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N ++  Y Q    ++A+ L + M   G EPD  T + +L AC   G ++ G  +      
Sbjct: 275 NAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHARMGD 334

Query: 361 --------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                     F  M S +V  WNA+++ Y Q E+ +EA+ L+  
Sbjct: 335 KPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHA 394

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M   G++ D  T + +L +C+    L  G+ VHA  +     +   + +GL+ +++KC  
Sbjct: 395 MNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSRGLEVVVPLQNGLVNMFAKCGS 454

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
             LA  +F  +   + V WNSM+     +     AF  FK+M      P + +F ++L+ 
Sbjct: 455 LTLALEMFRGMASRNTVSWNSMVTAFCQHGDGGGAFELFKEMLLEGGEPHEQTFTSILNF 514

Query: 515 CA--KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY-----CKCGDIYGARQFFDMMH 567
           C+    SS  QG+ +H +I   G  +D  V + L+ MY      KCG +  AR  FD + 
Sbjct: 515 CSHSACSSLDQGKALHQRITASGVDSDPTVATCLLTMYLLNALAKCGALDDARAVFDGIR 574

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
           GKN ++W  MI GYAQ+  GD A+ L+++M   G++ D+ITF +IL ACSH GLV VG E
Sbjct: 575 GKNVLSWTAMIVGYAQHARGDGALELFREMELDGIQADEITFTSILHACSHRGLVRVGRE 634

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F SM  DH + P  +HY  ++D L RAG   EAE +    P     V    L+SS ++H
Sbjct: 635 YFRSMVEDHAIAPSAEHYNVVMDMLARAGRVGEAEEVAKVFPAIKH-VALMTLVSSSQVH 693

Query: 688 A 688
            
Sbjct: 694 G 694



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 167/606 (27%), Positives = 289/606 (47%), Gaps = 67/606 (11%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           G   H  + + G+DK+ Y+ N L+ +Y  CG    A  +F+++ + N  ++T M+S  A+
Sbjct: 22  GMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIFDKLIDRNVYSWTIMLSAYAQ 81

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
               +EAL +   M  + +  +SV+   +LG C+  G  VE+               G++
Sbjct: 82  NGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLG-DVET---------------GRK 125

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +H   + LG++ D  +S ++L MY+K   +  A+ IF +L  + VVSW  +I  + Q  +
Sbjct: 126 IHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGR 185

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVACV----------------------------- 349
              A+EL   M   G +P+E T +N+L AC                              
Sbjct: 186 PRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGST 245

Query: 350 ------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                 R G++   +  FD +   S  SWNA++ +Y Q  +  +A+ L++EM   G +PD
Sbjct: 246 AVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPD 305

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             T   +L +C+++G LE G+++HA   +     D    S ++ +Y+KC   E A   F 
Sbjct: 306 TFTHVCLLGACSSLGALEEGERIHA---RMGDKPDGLAGSAIVAMYAKCGGIEHAMTAFT 362

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
           ++   ++V WN++IAG        EA   +  M    +    ++F++VL +C+      +
Sbjct: 363 KMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSE 422

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           GR VHA+I   G    + + + L+ M+ KCG +  A + F  M  +NTV+WN M+  + Q
Sbjct: 423 GRAVHARIVSRGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQ 482

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL--VDVGVEIFNSMQLDHGVEPI 641
           +G G  A  L+K+M+  G +P + TF +IL  CSHS    +D G  +   +    GV+  
Sbjct: 483 HGDGGGAFELFKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITAS-GVDSD 541

Query: 642 LDHYTC-----MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA 696
               TC     +++ L + G   +A  + D +  K + + W  ++     HA        
Sbjct: 542 PTVATCLLTMYLLNALAKCGALDDARAVFDGIRGK-NVLSWTAMIVGYAQHAR----GDG 596

Query: 697 AEELFR 702
           A ELFR
Sbjct: 597 ALELFR 602



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 191/363 (52%), Gaps = 5/363 (1%)

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
           +K +E+ +++   G + D     N++      G +   RE+FD +   +V SW  MLS+Y
Sbjct: 20  SKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIFDKLIDRNVYSWTIMLSAY 79

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           +Q+ ++ EA+ L  +M   G++P+  T   IL +C+ +G +E+G+++HA  +      D 
Sbjct: 80  AQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDT 139

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            V++ ++G+YSKC++   A+++F  +   D+V W ++I   S       A   F +M  +
Sbjct: 140 VVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLD 199

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
            + P + +F  +L++C  + +   G +++ +    GY  D+FVGS  + MY + G++  A
Sbjct: 200 GVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEA 259

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           +  FD +  K+T +WN ++  Y Q+G+  +A+ LYK+M   G +PD  T V +L ACS  
Sbjct: 260 KAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFTHVCLLGACSSL 319

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           G ++ G  I   M    G +P     + ++    + G    A     +M    + V+W  
Sbjct: 320 GALEEGERIHARM----GDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMS-SSNVVVWNA 374

Query: 680 LLS 682
           L++
Sbjct: 375 LIA 377



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 144/299 (48%), Gaps = 4/299 (1%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  +   +L  C     L  G ++H    ++    D Y+ + LI +Y  C     A  +F
Sbjct: 2   DSASYGRLLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIF 61

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
            ++ + ++  W  M++  + N   +EA +   QM    + P   +F  +L +C+ L    
Sbjct: 62  DKLIDRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVE 121

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            GR++HA++   G+  D  V +A++ MY KC  +  A++ FD +  K+ V+W  +I  ++
Sbjct: 122 TGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFS 181

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN-SMQLDHGVEPI 641
           Q G    A+ L+ +M   GVKP++ TFV IL AC++   ++ G +++  ++   +G +  
Sbjct: 182 QLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVF 241

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
           +   +  +    R G+  EA+   D +  K     W  ++ +   H ++  A    +E+
Sbjct: 242 VG--STAVTMYSRFGNLVEAKAAFDHLREKSTGS-WNAIVRAYIQHGHISQALSLYKEM 297


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 188/524 (35%), Positives = 285/524 (54%), Gaps = 34/524 (6%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYA--KNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           +Q+H   ++     D   ++ ++   A   +G +  A ++F+ +P  +  + N +I GY 
Sbjct: 57  KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------------------- 348
            K    +AI   Q M   G +PD  T  ++  +C                          
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCEGKQLHCHSTKLGFASDAYIQN 176

Query: 349 ------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                    G + + R++FD M + SV SW  M+ +Y+Q +   EAIKLFR M+   VKP
Sbjct: 177 TLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKP 236

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           +  TL  +L++CA    LE+ KQVH    +T       + S L+ +Y KC    LA  +F
Sbjct: 237 NEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLF 296

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
           +++PE ++ CWN MI G   +S   EA   F +M+ + +   + + A++L +C  L +  
Sbjct: 297 NKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALE 356

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G+ +H  IEK+    D+ +G+AL++MY KCG I  A + F  M  K+ +TW  +I G A
Sbjct: 357 LGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLA 416

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
             G G +A+ L+ +M  S VKPD ITFV +L ACSH+GLV+ G+  FNSM   +G++P +
Sbjct: 417 MCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSI 476

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           +HY CM+D LGRAG   EAE LI  MP   D  +   LLS+CR+H N+ +A+RAA++L  
Sbjct: 477 EHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIE 536

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LDPKN   Y LL+NIYSS+  W+  + +RELM E  I K P  S
Sbjct: 537 LDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCS 580



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 255/541 (47%), Gaps = 94/541 (17%)

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYA--KCGWTKHAVPV 177
           H  L S+ K +T    +   ++ H  +++  L  + + A+ +++  A    G   +A  V
Sbjct: 41  HPCLLSLEKCTT----MSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLV 96

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F ++  P   T  +++ G    +   +A+  ++LM+ + +  D  +  S+      + CG
Sbjct: 97  FNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF-----KSCG 151

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           V  +              G+Q+HC + KLGF +D ++ N+L++MY+  G + SA  +F  
Sbjct: 152 VLCE--------------GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDK 197

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT- 356
           +  +SVVSW  MI  Y Q     +AI+L +RM+    +P+E+T +N+L AC RS D++T 
Sbjct: 198 MVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETA 257

Query: 357 ----------------------------------GREMFDSMPSPSVSSWNAMLSSYSQS 382
                                              R++F+ MP  ++  WN M++ + + 
Sbjct: 258 KQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVED 317

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
            +++EA+ LF EMQ  GVK D+ T+A +L +C  +G LE GK +H    K    +D  + 
Sbjct: 318 SDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALG 377

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + L+ +Y+KC   E A RVF  +PE D++ W ++I GL++    ++A   F +M+ +E+ 
Sbjct: 378 TALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVK 437

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +F  VL++C+           HA +  +G           I  +    + YG +  
Sbjct: 438 PDAITFVGVLAACS-----------HAGLVNEG-----------IAYFNSMPNKYGIQPS 475

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS-HSGL 621
            +         +  M+    + G   EA  L ++M    + PD    V +L+AC  H  L
Sbjct: 476 IE--------HYGCMVDMLGRAGRIAEAEDLIQNM---PMAPDYFVLVGLLSACRIHGNL 524

Query: 622 V 622
           V
Sbjct: 525 V 525



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 191/419 (45%), Gaps = 55/419 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH H  + G   D ++ N L+ +YS C    SA+                       
Sbjct: 156 GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSAR----------------------- 192

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+FD+M  ++VVSW  +I A  +  L  +A+ ++ +M      P  ITL +V
Sbjct: 193 --------KVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNV 244

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A     D+E  ++ H  + + G+  +  + +AL+ +Y KCG    A  +F +M E N 
Sbjct: 245 LTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNL 304

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
             +  M++G  +     EAL +F  M    V  D V+++S+L  C   G  +E       
Sbjct: 305 FCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLG-ALEL------ 357

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ +H    K   E D+ L  +L+DMYAK G ++SA  +F  +PE+ V++W
Sbjct: 358 ---------GKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTW 408

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             +I G     Q  KA+EL   M+    +PD +T + +L AC  +G +  G   F+SMP+
Sbjct: 409 TALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPN 468

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                PS+  +  M+    ++    EA  L + M    + PD   L  +LS+C   G L
Sbjct: 469 KYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP---MAPDYFVLVGLLSACRIHGNL 524


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 185/511 (36%), Positives = 275/511 (53%), Gaps = 72/511 (14%)

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           D++  N+LL  YAK G +++  V+F  +P R  VS+N +IA +     S KA+++L RM+
Sbjct: 88  DVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQ 147

Query: 331 SCGFEPDEVTSINMLVAC-----------------------------------VRSGDIK 355
             GF+P + + +N L AC                                    + GDI 
Sbjct: 148 EDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDID 207

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
             R +FD M   +V SWN M+S Y +  N  E I LF EMQ  G+KPD  T++ +L++  
Sbjct: 208 KARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA-- 265

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
                                            Y +C R + A  +F ++P+ D +CW +
Sbjct: 266 ---------------------------------YFRCGRVDDARNLFIKLPKKDEICWTT 292

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MI G + N  + +A+M F  M +  + P  ++ ++++SSCAKL+S + G+ VH ++   G
Sbjct: 293 MIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMG 352

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
             N + V SAL++MYCKCG    AR  F+ M  +N +TWN MI GYAQNG   EA+ LY+
Sbjct: 353 IDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYE 412

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
            M     KPD+ITFV +L+AC ++ +V  G + F+S+  +HG+ P LDHY CMI  LGR+
Sbjct: 413 RMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSIS-EHGIAPTLDHYACMITLLGRS 471

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLA 715
           G   +A  LI  MP + +  IW  LLS C    +++ A+ AA  LF LDP+N+ PY +L+
Sbjct: 472 GSVDKAVDLIQGMPHEPNYRIWSTLLSVCA-KGDLKNAELAASHLFELDPRNAGPYIMLS 530

Query: 716 NIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           N+Y++ GRW D+  VR LM E    K  AYS
Sbjct: 531 NLYAACGRWKDVAVVRSLMKEKNAKKFAAYS 561



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 149/467 (31%), Positives = 239/467 (51%), Gaps = 60/467 (12%)

Query: 5   VAGKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           +  K L +H+  N LF   D+F+ N+L+ LY+K      AQ++FD M  +D+YSWN +LS
Sbjct: 39  IQAKRLQSHMELN-LFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLS 97

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
           A  K   +E  + +FD+MP R+ VS+N LI+    NG   KAL V  +M  +GF PT  +
Sbjct: 98  AYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYS 157

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
             +  +A + LLD+ HG++ HG ++   L +N +V NA+  +YAKCG    A  +F+ M 
Sbjct: 158 HVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMI 217

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV---CAR------ 233
           + N V++  M+SG  K     E + +F  M    +  D V++S+VL     C R      
Sbjct: 218 DKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARN 277

Query: 234 ---------EGC-----------GVESDVFAQSDNKFSRNV------------------- 254
                    E C           G E D +    +   RNV                   
Sbjct: 278 LFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLAS 337

Query: 255 --HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
             HGQ VH   + +G +  + +S++L+DMY K G    A VIF  +P R+V++WN MI G
Sbjct: 338 LYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILG 397

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP----SPS 368
           Y Q  Q  +A+ L +RM+   F+PD +T + +L AC+ +  +K G++ FDS+     +P+
Sbjct: 398 YAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPT 457

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
           +  +  M++   +S +  +A+ L + M     +P+    + +LS CA
Sbjct: 458 LDHYACMITLLGRSGSVDKAVDLIQGMPH---EPNYRIWSTLLSVCA 501



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 217/448 (48%), Gaps = 28/448 (6%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           K+ ++ N LL LYAK G    A  VF+ M++ +  ++  ++S  AK   V     +F  M
Sbjct: 56  KDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQM 115

Query: 213 IRKAVSIDSVSLSSVLGVCAREG---------CGVESDVFA----------QSDNKFSRN 253
             +    DSVS ++++   A  G           ++ D F           Q+ ++    
Sbjct: 116 PYR----DSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDL 171

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
            HG+Q+H   +      +  + N++ DMYAK GD+D A ++F  + +++VVSWN+MI+GY
Sbjct: 172 RHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGY 231

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
            +     + I L   M+  G +PD VT  N+L A  R G +   R +F  +P      W 
Sbjct: 232 VKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWT 291

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
            M+  Y+Q+   ++A  LF +M  R VKPD  T++ ++SSCA +  L  G+ VH   +  
Sbjct: 292 TMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVM 351

Query: 434 ASHIDN--YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
              IDN   V+S L+ +Y KC     A  +F  +P  +++ WN+MI G + N   +EA  
Sbjct: 352 G--IDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALT 409

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            +++M+Q    P   +F  VLS+C       +G++    I + G    +   + +I +  
Sbjct: 410 LYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLG 469

Query: 552 KCGDIYGARQFFD-MMHGKNTVTWNEMI 578
           + G +  A      M H  N   W+ ++
Sbjct: 470 RSGSVDKAVDLIQGMPHEPNYRIWSTLL 497



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 37/231 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H  ++  G+ +   + + L+++Y KC  T  A+                       
Sbjct: 341 GQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDAR----------------------- 377

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +F+ MP RNV++WN +I    +NG   +AL++Y +M  E F P +IT   V
Sbjct: 378 --------VIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGV 429

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EPN 185
             A      V+ G++    + + G+   +     +++L  + G    AV + + M  EPN
Sbjct: 430 LSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPN 489

Query: 186 EVTFTAMMSGLAKTD---RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
              ++ ++S  AK D     + A  +F L  R A     + LS++   C R
Sbjct: 490 YRIWSTLLSVCAKGDLKNAELAASHLFELDPRNAGPY--IMLSNLYAACGR 538



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 43/258 (16%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGY-VNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +  ++  CA+ +   Q +++ + +E + +   D F+ + L+ +Y K G +  A+  FD M
Sbjct: 25  YTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNM 84

Query: 567 HGKNTVTWNEMIHGYAQ-------------------------------NGYGDEAVRLYK 595
             ++  +WN ++  YA+                               NG+  +A+++  
Sbjct: 85  TKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLV 144

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDV--GVEIFNSMQL-DHGVEPILDHYTCMIDCL 652
            M   G +P   + V  L ACS   L+D+  G +I   + + D G    + +   M D  
Sbjct: 145 RMQEDGFQPTQYSHVNALQACSQ--LLDLRHGKQIHGRIVVADLGENTFVRN--AMTDMY 200

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE--LFRLDPKNSAP 710
            + G   +A +L D M  K + V W +++S      N         E  L  L P +   
Sbjct: 201 AKCGDIDKARLLFDGMIDK-NVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKP-DLVT 258

Query: 711 YSLLANIYSSLGRWDDLR 728
            S + N Y   GR DD R
Sbjct: 259 VSNVLNAYFRCGRVDDAR 276


>gi|302757275|ref|XP_002962061.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
 gi|300170720|gb|EFJ37321.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
          Length = 847

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 201/711 (28%), Positives = 361/711 (50%), Gaps = 64/711 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
            A++ A  ++  +E A ++F+ M     + ++++W  +++A  + G   +AL ++ KM  
Sbjct: 141 TAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTAYNQLGHAREALLLFRKMDL 200

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
           +G  P      +   A +++  +E G   H  ++   ++ +  V NALL+ YAK G    
Sbjct: 201 QGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGLVHE 260

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           +  +F  M   N VT++A+++  A+      A+E+FR M+   V+ + V+  S+L  C+ 
Sbjct: 261 SRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAPNKVTFVSLLFSCSH 320

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA-DLHLSNSLLDMYAKNGDMDSAE 292
              G+  D+             G+++H   +K    A D+ ++ +L++MY + G +  A+
Sbjct: 321 --AGLIKDL-----------ARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAK 367

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM--KSCGFEPDEVTSINMLVACVR 350
            +F  +  R++ SWN M+  Y    +S +A+   + M  +  G +PD +T ++   AC  
Sbjct: 368 TVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGM 427

Query: 351 SGDIKTGREM-------------------------------------FDSMPSPSVSSWN 373
            GD+    E+                                      D MP  +V SW 
Sbjct: 428 MGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRTNVISWT 487

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           +M+ +  Q+E+++ AI+++R MQ  G KPD  T+  ++ + A +  L+ G + HA +   
Sbjct: 488 SMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAF 547

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL---DIVCWNSMIAGLSLNSLDIEAF 490
                  V + L+ +Y      + AE VF  + +    D+V WNSM++  + N L  +A 
Sbjct: 548 GFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQAL 607

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEM 549
             F++M  +  +P + +F  +L++CA   S   QG ++HA     G  +DI V + L+ M
Sbjct: 608 GTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQGVKIHALAAACGLDSDIDVANTLLHM 667

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y +CG++  AR+ F  +  KN V+W+ M    A NG  D A++ ++ M+  G++P+ +TF
Sbjct: 668 YSRCGNLSRARKVFHALTQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVTF 727

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           ++IL+ CSH+GL+D  V    +M  DH ++P + HY C++D L RAG FH AE L   +P
Sbjct: 728 ISILSGCSHTGLMDEAVSYLYAMSSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHLP 787

Query: 670 CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
              +PV W  LL +C +H +   A RAA+   +L P + APY  L+N  S+
Sbjct: 788 ---NPVAWNSLLGACLVHGDAETAARAADTAAKLQPLDCAPYVSLSNAMST 835



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 184/737 (24%), Positives = 333/737 (45%), Gaps = 108/737 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H  ++ +G   D +LCN LI++Y +C + H A  +F  +  K++++W        
Sbjct: 13  AGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTI------ 66

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    LI A   NGL  +A+ ++ +M   G      T ++
Sbjct: 67  -------------------------LIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSA 101

Query: 126 VFKAST--ALLDVEHGRRCHGLVIKIGL----DKNIYVANALLSLYAKCGWTKHAVPVFE 179
           + +A +   L  +  G+  H  + + GL    +  +  + A++  YA+ G  + A  +FE
Sbjct: 102 ILEACSNLGLAFLSLGKTIHSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFE 161

Query: 180 EMS----EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            M     +P+ + +TAMM+   +     EAL +FR M  + +  D  +  + +  C+   
Sbjct: 162 RMQLQVLDPDLIAWTAMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACS--- 218

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                               G  +H   +    E D  + N+LL+ YAK G +  +  +F
Sbjct: 219 -------------SIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGLVHESRSLF 265

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG--- 352
           S++  ++VV+W+ ++A Y Q      A+EL + M   G  P++VT +++L +C  +G   
Sbjct: 266 SSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAPNKVTFVSLLFSCSHAGLIK 325

Query: 353 DIKTGREM------------------------------------FDSMPSPSVSSWNAML 376
           D+  GR++                                    FD M   +++SWNAML
Sbjct: 326 DLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAML 385

Query: 377 SSYSQSENHKEAIKLFREM--QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT- 433
            +YS ++   EA++ FR M  +  GVKPD  T      +C  MG L    ++H+   ++ 
Sbjct: 386 VTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSW 445

Query: 434 -ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
            ++  D  + S LI +Y  C+R   A +V  ++P  +++ W SMI     N  +  A   
Sbjct: 446 PSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRTNVISWTSMILACEQNEDNEAAIRV 505

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           ++ M+ +   P   +  TV+ + A L    +G + HAQ    G+     VG+AL+ +Y  
Sbjct: 506 YRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGT 565

Query: 553 CGDIYGARQFFDMMHGK---NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
            GD+  A   F  +  +   + VTWN M+  + QNG  ++A+  ++ M+  G  PD  TF
Sbjct: 566 SGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALGTFQRMLHHGRHPDKTTF 625

Query: 610 VAILTACSH--SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           V IL AC+   S L+  GV+I +++    G++  +D    ++    R G+   A  +   
Sbjct: 626 VNILNACAGDPSKLLQ-GVKI-HALAAACGLDSDIDVANTLLHMYSRCGNLSRARKVFHA 683

Query: 668 MPCKDDPVIWEVLLSSC 684
           +  K + V W  + ++C
Sbjct: 684 LTQK-NVVSWSAMAAAC 699



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 160/598 (26%), Positives = 282/598 (47%), Gaps = 60/598 (10%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           +++ GR  H  +I  G  ++ Y+ N L+ +Y +C     A+ VF  +S  N  T+T ++ 
Sbjct: 10  NLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILIV 69

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
                    EA+E+FR M    V  D  + S++L  C+  G    S           + +
Sbjct: 70  AHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLS---------LGKTI 120

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP----ERSVVSWNVMI 310
           H  ++H   +KL     +  S +++D YA+NG ++ A  IF  +     +  +++W  M+
Sbjct: 121 H-SRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMM 179

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------------- 348
             Y Q   + +A+ L ++M   G EPD    +  + AC                      
Sbjct: 180 TAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVE 239

Query: 349 -------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                         ++G +   R +F SM   +V +W+A++++Y+Q+ +H+ A++LFREM
Sbjct: 240 CDGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREM 299

Query: 396 QFRGVKPDRTTLAIILSSCAAMGI---LESGKQVHAASLK-TASHIDNYVASGLIGIYSK 451
              GV P++ T   +L SC+  G+   L  G+++HA  LK TA+  D  VA+ L+ +Y +
Sbjct: 300 LLDGVAPNKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGR 359

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM--RQNEMYPTQFSFA 509
           C     A+ VF  +   +I  WN+M+   SLN   +EA  FF+ M      + P   +F 
Sbjct: 360 CGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFV 419

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVN--DIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +   +C  +    +  ++H++I +    N  D+ +GSALI+MY  C  +  A Q  D M 
Sbjct: 420 SAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMP 479

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
             N ++W  MI    QN   + A+R+Y+ M   G KPD +T V ++ A ++   +  G+E
Sbjct: 480 RTNVISWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIE 539

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK--DDPVIWEVLLSS 683
            F++     G          ++   G +G    AE +  E+  +  +D V W  +LS+
Sbjct: 540 -FHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSA 596



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 196/392 (50%), Gaps = 24/392 (6%)

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSS 371
           G  +   + +A+ L  +M + G+  D      ++    R   +     +F ++   +V +
Sbjct: 6   GDAKNLDAGRAVHL--QMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFT 63

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI--LESGKQVHA- 428
           W  ++ +++ +    EA++LFREM   GV+ D  T + IL +C+ +G+  L  GK +H+ 
Sbjct: 64  WTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSR 123

Query: 429 ---ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR----IPELDIVCWNSMIAGLS 481
                LK  S+     ++ +I  Y++    E A  +F R    + + D++ W +M+   +
Sbjct: 124 IHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTAYN 183

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
                 EA + F++M    + P +F+F   + +C+ + S  QG  +H+++       D  
Sbjct: 184 QLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGV 243

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           VG+AL+  Y K G ++ +R  F  M  KN VTW+ ++  YAQNG+ + AV L+++M+  G
Sbjct: 244 VGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDG 303

Query: 602 VKPDDITFVAILTACSHSGLV-------DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           V P+ +TFV++L +CSH+GL+        +  EI  S      V       T +++  GR
Sbjct: 304 VAPNKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVA----TALVNMYGR 359

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
            G   +A+ + DEM  + +   W  +L +  L
Sbjct: 360 CGSVSDAKTVFDEMQHR-NITSWNAMLVTYSL 390



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 183/400 (45%), Gaps = 36/400 (9%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           +R +E++S+ + +  +          D+   +A++        L  A ++ D+MP  NV+
Sbjct: 432 SRAVEIHSRISQSWPSNQ-------TDVVLGSALIKMYGNCRRLADAAQVLDQMPRTNVI 484

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW ++I A  +N   E A+ VY  M   G  P  +T+ +V KA+  L D++ G   H   
Sbjct: 485 SWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQA 544

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM---SEPNEVTFTAMMSGLAKTDRVV 203
              G   +  V NAL++LY   G  + A  VF+E+   S  + VT+ +M+S   +     
Sbjct: 545 AAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPN 604

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           +AL  F+ M+      D  +  ++L  CA +                S+ + G ++H L 
Sbjct: 605 QALGTFQRMLHHGRHPDKTTFVNILNACAGDP---------------SKLLQGVKIHALA 649

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
              G ++D+ ++N+LL MY++ G++  A  +F  L +++VVSW+ M A       +  A+
Sbjct: 650 AACGLDSDIDVANTLLHMYSRCGNLSRARKVFHALTQKNVVSWSAMAAACAHNGDADGAL 709

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSS 378
           +  + M   G +P+ VT I++L  C  +G +        +M S     P+V  +  +L  
Sbjct: 710 QAFRGMLHGGIQPNAVTFISILSGCSHTGLMDEAVSYLYAMSSDHNLKPTVQHYACLLDL 769

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            ++      A K  R  +     P+      +L +C   G
Sbjct: 770 LAR------AGKFHRAEELATHLPNPVAWNSLLGACLVHG 803



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 162/341 (47%), Gaps = 25/341 (7%)

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L++G+ VH   + +  H D Y+ + LI +Y +C+    A  VFH +   ++  W  +I  
Sbjct: 11  LDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILIVA 70

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF--QGRQVHAQIEKDGYV 537
            + N L  EA   F++M  + +   +F+F+ +L +C+ L  +F   G+ +H++I + G  
Sbjct: 71  HTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQGLK 130

Query: 538 ----NDIFVGSALIEMYCKCGDIYGARQFFDMMH----GKNTVTWNEMIHGYAQNGYGDE 589
                 +   +A+I+ Y + G I  A + F+ M       + + W  M+  Y Q G+  E
Sbjct: 131 LTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTAYNQLGHARE 190

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+ L++ M   G++PD   FVA + ACS    ++ G  + +S  L   VE        ++
Sbjct: 191 ALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGT-VLHSRLLASSVECDGVVGNALL 249

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR---LD-- 704
           +   +AG  HE+  L   M  K + V W  ++++   + +       A ELFR   LD  
Sbjct: 250 NFYAKAGLVHESRSLFSSMKVK-NVVTWSAIVAAYAQNGH----HEPAVELFREMLLDGV 304

Query: 705 -PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
            P      SLL +  S  G   DL   R++ +E  I+K  A
Sbjct: 305 APNKVTFVSLLFSC-SHAGLIKDLARGRKIHAE--ILKSTA 342



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 58/313 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G   HA     G    T + N L+ LY    +  +A+++F ++  + +            
Sbjct: 537 GIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSV------------ 584

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                            +VV+WN+++SA  +NGL  +AL  + +M + G  P   T  ++
Sbjct: 585 ----------------EDVVTWNSMLSAWNQNGLPNQALGTFQRMLHHGRHPDKTTFVNI 628

Query: 127 FKA----STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
             A     + LL    G + H L    GLD +I VAN LL +Y++CG    A  VF  ++
Sbjct: 629 LNACAGDPSKLL---QGVKIHALAAACGLDSDIDVANTLLHMYSRCGNLSRARKVFHALT 685

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE--S 240
           + N V+++AM +  A       AL+ FR M+   +  ++V+  S+L  C+  G   E  S
Sbjct: 686 QKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVTFISILSGCSHTGLMDEAVS 745

Query: 241 DVFA-QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
            ++A  SD+     V  Q   C                LLD+ A+ G    AE + ++LP
Sbjct: 746 YLYAMSSDHNLKPTV--QHYAC----------------LLDLLARAGKFHRAEELATHLP 787

Query: 300 ERSVVSWNVMIAG 312
             + V+WN ++  
Sbjct: 788 --NPVAWNSLLGA 798


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 210/663 (31%), Positives = 338/663 (50%), Gaps = 76/663 (11%)

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           ++V WN  ISA +R G  E ALSV+N M     V  +  ++     S    D      C 
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYL--SNNKFD------CA 110

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
             V +   D+++   N +LS Y K G    A  +F +M E + V++ AM+SG A+   V 
Sbjct: 111 RKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           EA ++F  M+ K    + +S + +L    + G  +E D     D+K              
Sbjct: 171 EARKIFDQMLVK----NEISWNGLLSAYVQNG-RIE-DARRLFDSKM------------- 211

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
                + ++   N L+  Y +   +D A  +F  +P R  +SWN+MI GY Q    ++A 
Sbjct: 212 -----DWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEAR 266

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
            L + +       D      M+   V++G +     +F+ MP  +  SWNAM++ Y QS+
Sbjct: 267 RLFEELPI----RDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQ 322

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
             ++A +LF +M      P R T +                              N + +
Sbjct: 323 QIEKARELFDQM------PSRNTSSW-----------------------------NTMVT 347

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           G    Y++C   + A+ +F  +P+ D + W +MI+G + +    EA   F +M+++    
Sbjct: 348 G----YAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGIL 403

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            + + A  LSSCA++++   G+Q+H ++ K G+      G+AL+ MY KCG I  A   F
Sbjct: 404 NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVF 463

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           + +  K+ V+WN MI GYA++G+G EA+ L++ M  + +KPDD+T V +L+ACSH+G VD
Sbjct: 464 EDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVD 522

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G+E FNSM  ++G+     HYTCMID LGRAG   EA  L+  MP   D   W  LL +
Sbjct: 523 KGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 582

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
            R+H +  L ++AAE++F ++P NS  Y LL+N+Y++ GRW ++R +R  M +  + K P
Sbjct: 583 SRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVP 642

Query: 744 AYS 746
            YS
Sbjct: 643 GYS 645



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 176/610 (28%), Positives = 269/610 (44%), Gaps = 115/610 (18%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
           T   N +I  Y   N    A+ +F+KMP +D+ SWN +LS   K+ +L  A  LF++MPE
Sbjct: 91  TVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPE 150

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
           ++VVSWN ++S   +NG  E+A  ++++M     V   I+   +  A      +E  RR 
Sbjct: 151 KDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARR- 205

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
              +    +D  I   N L+  Y +      A  +F+ M   +++++  M++G A+   +
Sbjct: 206 ---LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLL 262

Query: 203 VEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
            EA  +F  L IR                          DVFA +               
Sbjct: 263 SEARRLFEELPIR--------------------------DVFAWT--------------- 281

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
                          +++  + +NG +D A  IF  +PE++ VSWN MIAGY Q  Q  K
Sbjct: 282 ---------------AMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEK 326

Query: 322 AIELLQRMKSCGFEPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
           A EL  +M S        +S N M+    + G+I   + +FD MP     SW AM+S Y+
Sbjct: 327 ARELFDQMPS-----RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYA 381

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           QS   +EA+ LF +M+  G   +R+ LA  LSSCA +  LE GKQ+H   +K        
Sbjct: 382 QSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYI 441

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
             + L+ +Y KC   E A  VF  I E DIV WN+MIAG + +    EA   F+ M+   
Sbjct: 442 AGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT- 500

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           + P   +   VLS+C+                  G+V+                      
Sbjct: 501 IKPDDVTLVGVLSACSHT----------------GFVDK-------------------GM 525

Query: 561 QFFDMMHGKNTVTWNE-----MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           ++F+ M+    +T N      MI    + G  DEA+ L K M      PD  T+ A+L A
Sbjct: 526 EYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSM---PFYPDAATWGALLGA 582

Query: 616 CSHSGLVDVG 625
               G  ++G
Sbjct: 583 SRIHGDTELG 592



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 201/417 (48%), Gaps = 69/417 (16%)

Query: 19  LFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           LFD     D    N +I  Y++      A+ LF+++P +D+++W A++S   ++  L+ A
Sbjct: 237 LFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEA 296

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
            ++F+EMPE+N VSWN +I+  V++   EKA  ++++M +                    
Sbjct: 297 TRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPS-------------------- 336

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
                              +N    N +++ YA+CG    A  +F+EM + + +++ AM+
Sbjct: 337 -------------------RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI 377

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           SG A++ +  EAL +F  M R    ++  +L+  L  CA E   +E              
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCA-EIAALE-------------- 422

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+Q+H   +K GF+      N+LL MY K G ++ A  +F ++ E+ +VSWN MIAGY
Sbjct: 423 -LGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGY 481

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-----PSPS 368
            +     +A+ L + MK    +PD+VT + +L AC  +G +  G E F+SM      + +
Sbjct: 482 ARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITAN 540

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
              +  M+    ++    EA+ L + M F    PD  T   +L +    G  E G++
Sbjct: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFY---PDAATWGALLGASRIHGDTELGEK 594



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 172/378 (45%), Gaps = 53/378 (14%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N +I  Y +      A+ LFD+MP ++  SWN +++   +  +++ A  LFDEMP+R+ +
Sbjct: 312 NAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCI 371

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  +IS   ++G  E+AL ++ KM  +G +     LA    +   +  +E G++ HG +
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRL 431

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K G        NALL++Y KCG  + A  VFE+++E + V++  M++G A+     EAL
Sbjct: 432 VKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEAL 491

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            +F  M +  +  D V+L  VL  C+  G       F     ++  +++           
Sbjct: 492 ALFESM-KMTIKPDDVTLVGVLSACSHTG-------FVDKGMEYFNSMYQN--------Y 535

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           G  A+      ++D+  + G +D A                                  L
Sbjct: 536 GITANAKHYTCMIDLLGRAGRLDEA----------------------------------L 561

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM--PSPSVSSWNAMLSS-YSQSE 383
             MKS  F PD  T   +L A    GD + G +  + +    P  S    +LS+ Y+ S 
Sbjct: 562 NLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASG 621

Query: 384 NHKEAIKLFREMQFRGVK 401
             +E  ++  +M+ +GVK
Sbjct: 622 RWREVREMRSKMRDKGVK 639



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 3/108 (2%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH  +++ G        N L+ +Y KC +   A  +F+ +  KDI SWN +++   +
Sbjct: 424 GKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYAR 483

Query: 67  SDDLEFAYKLFDEMP---ERNVVSWNNLISALVRNGLEEKALSVYNKM 111
               + A  LF+ M    + + V+   ++SA    G  +K +  +N M
Sbjct: 484 HGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSM 531


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 186/510 (36%), Positives = 279/510 (54%), Gaps = 39/510 (7%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+L++ YAK+  +  A  +F  +P+  +VS+N +IA Y  + +   A+ L   ++   F 
Sbjct: 79  NTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFG 138

Query: 336 PDEVTSINMLVAC---------------------------------VRSGDIKTGREMFD 362
            D  T   +++AC                                  R G +   R +F 
Sbjct: 139 LDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFR 198

Query: 363 SMPSPSVS---SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
            M         SWNAM+ +  Q     EA++LFREM  RG+K D  T+A +L++   +  
Sbjct: 199 EMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKD 258

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL-AERVFHRIPELDIVCWNSMIA 478
           L  G Q H   +K+  H +++V SGLI +YSKC    +   +VF  I   D+V WN+MI+
Sbjct: 259 LVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMIS 318

Query: 479 GLS-LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA-QIEKDGY 536
           G S    L  +    F++M+ N  +P   SF  V S+C+ LSS   G+QVHA  I+ D  
Sbjct: 319 GFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIP 378

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
            N + V +AL+ MY KCG+++ AR+ FD M   N V+ N MI GYAQ+G   E++RL++ 
Sbjct: 379 YNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFEL 438

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M+   + P+ ITF+A+L+AC H+G V+ G + FN M+    +EP  +HY+CMID LGRAG
Sbjct: 439 MLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAG 498

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              EAE +I+ MP     + W  LL +CR H NV LA +AA E  +L+P N+APY +L+N
Sbjct: 499 KLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSN 558

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +Y+S  RW++   V+ LM E  + K P  S
Sbjct: 559 MYASAARWEEAATVKRLMRERGVKKKPGCS 588



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 244/509 (47%), Gaps = 70/509 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GK LHA   ++ +   T+L N    LYSKC + H+AQ  FD   + +++S+N +++A 
Sbjct: 26  ITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYPNVFSYNTLINAY 85

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            K   +  A ++FDE+P+ ++VS+N LI+A    G    AL ++ ++    F     TL+
Sbjct: 86  AKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLS 145

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            V  A     DV   R+ H  V+  G D    V NA+L+ Y++ G+   A  VF EM E 
Sbjct: 146 GVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEG 203

Query: 185 ---NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG--VCAREGCGVE 239
              +EV++ AM+    +    +EA+E+FR M+R+ + +D  +++SVL    C ++  G  
Sbjct: 204 GGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVG-- 261

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK-NGDMDSAEVIFSNL 298
                           G Q H + IK GF  + H+ + L+D+Y+K  G M     +F  +
Sbjct: 262 ----------------GMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEI 305

Query: 299 PERSVVSWNVMIAGYGQKYQ--STKAIELLQRMKSCGFEPDEVTSINMLVAC-------- 348
               +V WN MI+G+ Q Y+  S   I   + M+  GF PD+ + + +  AC        
Sbjct: 306 AAPDLVLWNTMISGFSQ-YEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSV 364

Query: 349 ----------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                                        + G++   R +FD+MP  ++ S N+M++ Y+
Sbjct: 365 GKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYA 424

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---VHAASLKTASHI 437
           Q     E+++LF  M  + + P+  T   +LS+C   G +E G++   +     +     
Sbjct: 425 QHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEA 484

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIP 466
           ++Y  S +I +  +  + + AER+   +P
Sbjct: 485 EHY--SCMIDLLGRAGKLKEAERIIETMP 511



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 148/592 (25%), Positives = 252/592 (42%), Gaps = 134/592 (22%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG------------ 169
           T  ++ KA  A  D+  G+  H L  K  +  + Y++N    LY+KCG            
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 170 --------------WTKHAV-----PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
                         + KH++      VF+E+ +P+ V++  +++  A       AL +F 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            +      +D  +LS V+  C               D    R     Q+HC  +  G++ 
Sbjct: 131 EVRELRFGLDGFTLSGVIIACG-------------DDVGLVR-----QLHCFVVVCGYDC 172

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPE---RSVVSWNVMIAGYGQKYQSTKAIELLQ 327
              ++N++L  Y++ G ++ A  +F  + E   R  VSWN MI   GQ  +  +A+EL +
Sbjct: 173 YASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFR 232

Query: 328 RMKSCGFEPDEVTSINMLVA--CVR----------------------------------S 351
            M   G + D  T  ++L A  CV+                                  +
Sbjct: 233 EMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCA 292

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE-AIKLFREMQFRGVKPDRTTLAII 410
           G +   R++F+ + +P +  WN M+S +SQ E+  E  I  FREMQ  G  PD  +   +
Sbjct: 293 GGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCV 352

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELD 469
            S+C+ +     GKQVHA ++K+    +   V + L+ +YSKC     A RVF  +PE +
Sbjct: 353 TSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHN 412

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V  NSMIAG + + +++E+   F+ M Q ++ P   +F  VLS+C           VH 
Sbjct: 413 MVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSAC-----------VHT 461

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT-----WNEMIHGYAQN 584
                                   G +   +++F+MM  +  +      ++ MI    + 
Sbjct: 462 ------------------------GKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRA 497

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS-MQLD 635
           G   EA R+ + M      P  I +  +L AC   G V++ V+  N  +QL+
Sbjct: 498 GKLKEAERIIETM---PFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLE 546



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 192/432 (44%), Gaps = 64/432 (14%)

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
           + G+ +H L  K       +LSN    +Y+K G + +A+  F      +V S+N +I  Y
Sbjct: 26  ITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYPNVFSYNTLINAY 85

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
                                               +   I   R++FD +P P + S+N
Sbjct: 86  A-----------------------------------KHSLIHLARQVFDEIPQPDIVSYN 110

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA-AMGILESGKQVHAASLK 432
            ++++Y+     + A++LF E++      D  TL+ ++ +C   +G++   +Q+H   + 
Sbjct: 111 TLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLV---RQLHCFVVV 167

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE---LDIVCWNSMIAGLSLNSLDIEA 489
                   V + ++  YS+      A RVF  + E    D V WN+MI     +   +EA
Sbjct: 168 CGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEA 227

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
              F++M +  +    F+ A+VL++   +     G Q H  + K G+  +  VGS LI++
Sbjct: 228 VELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDL 287

Query: 550 YCKC-GDIYGARQFFDMMHGKNTVTWNEMIHGYAQ-NGYGDEAVRLYKDMIASGVKPDDI 607
           Y KC G +   R+ F+ +   + V WN MI G++Q     ++ +  +++M  +G  PDD 
Sbjct: 288 YSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDC 347

Query: 608 TFVAILTACSHSGLVDVGVEI----------FNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           +FV + +ACS+     VG ++          +N + +++           ++    + G+
Sbjct: 348 SFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNA----------LVAMYSKCGN 397

Query: 658 FHEAEMLIDEMP 669
            H+A  + D MP
Sbjct: 398 VHDARRVFDTMP 409



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 166/408 (40%), Gaps = 96/408 (23%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G   H  ++++G   ++ + + LI+LYSKC                           +
Sbjct: 260 VGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGG----------------------MVE 297

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVR-NGLEEKALSVYNKMSNEGFVPTHITL 123
           C+        K+F+E+   ++V WN +IS   +   L E  +  + +M + GF P   + 
Sbjct: 298 CR--------KVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSF 349

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEEMS 182
             V  A + L     G++ H L IK  +  N + V NAL+++Y+KCG    A  VF+ M 
Sbjct: 350 VCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP 409

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD- 241
           E N V+  +M++G A+    VE+L +F LM++K ++ ++++  +VL  C   G   E   
Sbjct: 410 EHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQK 469

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
            F     +F      +   C                ++D+  + G +  AE I   +P  
Sbjct: 470 YFNMMKERFRIEPEAEHYSC----------------MIDLLGRAGKLKEAERIIETMP-- 511

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD----IKTG 357
                                           F P  +    +L AC + G+    +K  
Sbjct: 512 --------------------------------FNPGSIEWATLLGACRKHGNVELAVKAA 539

Query: 358 REMFDSMP---SPSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGVK 401
            E     P   +P V     MLS+ Y+ +   +EA  + R M+ RGVK
Sbjct: 540 NEFLQLEPYNAAPYV-----MLSNMYASAARWEEAATVKRLMRERGVK 582



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 39/313 (12%)

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC------------- 452
           T   +L +C A   L +GK +HA   K+      Y+++    +YSKC             
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 453 ------------------QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
                                 LA +VF  IP+ DIV +N++IA  +       A   F 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           ++R+       F+ + V+ +C         RQ+H  +   GY     V +A++  Y + G
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGDDVGLV--RQLHCFVVVCGYDCYASVNNAVLACYSRKG 188

Query: 555 DIYGARQFFDMM---HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
            +  AR+ F  M    G++ V+WN MI    Q+  G EAV L+++M+  G+K D  T  +
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR-AGHFHEAEMLIDEMPC 670
           +LTA +    +  G++ F+ M +  G        + +ID   + AG   E   + +E+  
Sbjct: 249 VLTAFTCVKDLVGGMQ-FHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIA- 306

Query: 671 KDDPVIWEVLLSS 683
             D V+W  ++S 
Sbjct: 307 APDLVLWNTMISG 319



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 94/230 (40%), Gaps = 25/230 (10%)

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           +I G +L++L      +FK +     Y +   F  + S C  L ++          +   
Sbjct: 25  LITGKTLHAL------YFKSLIPPSTYLSN-HFTLLYSKCGSLHNA------QTSFDLTQ 71

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
           Y N +F  + LI  Y K   I+ ARQ FD +   + V++N +I  YA  G    A+RL+ 
Sbjct: 72  YPN-VFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVG-VEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           ++       D  T   ++ AC      DVG V   +   +  G +        ++ C  R
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGD----DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSR 186

Query: 655 AGHFHEAEMLIDEM--PCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
            G  +EA  +  EM      D V W  ++ +C  H         A ELFR
Sbjct: 187 KGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHRE----GLEAVELFR 232


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 200/637 (31%), Positives = 329/637 (51%), Gaps = 54/637 (8%)

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K    L    H +  HG +I+       ++ N ++  YA    + +A  VF+ + +PN 
Sbjct: 10  IKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNL 69

Query: 187 VTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVS----IDSVSLSSVLGVCAREGCGVESD 241
            ++  ++   +K+  + E    F +L  R  V+    I+  SLS ++G   +    +  D
Sbjct: 70  FSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKD 129

Query: 242 VFAQSDNKF---------SRNVH---GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            F+ +  +          S N H   G+Q+H   IKLGFE+ L + + LLDMY+K G + 
Sbjct: 130 -FSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCIS 188

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
            A+ +F  L +R+ V +N ++ G                                L+AC 
Sbjct: 189 DAKKVFYGLDDRNTVMYNTLMGG--------------------------------LLAC- 215

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
             G I+   ++F  M   SVS W+AM+   +Q+   KEAI+ FREM+  G+K D+     
Sbjct: 216 --GMIEDALQLFRGMEKDSVS-WSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGS 272

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L +C  +G +  G+Q+HA  ++T      YV S LI +Y KC+    A+ VF R+ + +
Sbjct: 273 VLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 332

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W +M+ G        EA   F  M+++ + P  ++    +S+CA +SS  +G Q H 
Sbjct: 333 VVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHG 392

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
           +    G ++ I V ++L+ +Y KCGDI  + + F+ M+ ++ V+W  M+  YAQ G   E
Sbjct: 393 KAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVE 452

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A++L+  M+  G+KPD +T   +++ACS +GLV+ G   F  M  ++G+ P   HY+CMI
Sbjct: 453 AIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMI 512

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
           D   R+G   EA   I+ MP + D + W  LLS+CR   N+ + K AAE L  LDP + A
Sbjct: 513 DLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPA 572

Query: 710 PYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            Y+LL++IY+S G+WD +  +R  M E  + K+P  S
Sbjct: 573 GYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQS 609



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 258/541 (47%), Gaps = 88/541 (16%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K++H +I+R     +TFL N ++  Y+   ++  A+ +FD +P  +++SWN +L A  KS
Sbjct: 23  KMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKS 82

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP--THITLAS 125
             L    + F+++P+R+ V+WN LI     +GL   A+  YN M  + F    T +TL +
Sbjct: 83  GHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKD-FSSNLTRVTLMT 141

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK------------------ 167
           + K S++   V  G++ HG VIK+G +  + V + LL +Y+K                  
Sbjct: 142 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRN 201

Query: 168 -------------CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
                        CG  + A+ +F  M E + V+++AM+ GLA+     EA+E FR M  
Sbjct: 202 TVMYNTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKI 260

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
           + + +D     SVL  C   G G  +D              G+Q+H   I+   +  +++
Sbjct: 261 EGLKMDQYPFGSVLPACG--GLGAIND--------------GRQIHACIIRTNLQDHIYV 304

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
            ++L+DMY K   +  A+ +F  + +++VVSW  M+ GYGQ  ++ +A+++   M+  G 
Sbjct: 305 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGI 364

Query: 335 EPDEVTSINMLVACV-----------------------------------RSGDIKTGRE 359
           +PD  T    + AC                                    + GDI     
Sbjct: 365 DPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTR 424

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F+ M      SW AM+S+Y+Q     EAI+LF +M   G+KPD  TL  ++S+C+  G+
Sbjct: 425 LFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGL 484

Query: 420 LESGKQVHAASLKTASHI-DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMI 477
           +E G++     +     +  N   S +I ++S+  R E A    + +P   D + W +++
Sbjct: 485 VEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLL 544

Query: 478 A 478
           +
Sbjct: 545 S 545



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 214/428 (50%), Gaps = 26/428 (6%)

Query: 3   AHVA-GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
            HV+ GK +H  +++ G      + + L+++YSK      A+ +F  +  ++   +N ++
Sbjct: 150 GHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLM 209

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   +E A +LF  M E++ VSW+ +I  L +NG+E++A+  + +M  EG      
Sbjct: 210 GGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQY 268

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
              SV  A   L  +  GR+ H  +I+  L  +IYV +AL+ +Y KC    +A  VF+ M
Sbjct: 269 PFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRM 328

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + N V++TAM+ G  +T R  EA+++F  M R  +  D  +L   +  CA         
Sbjct: 329 KQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACA--------- 379

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    S    G Q H   I  G    + +SNSL+ +Y K GD+D +  +F+ +  R
Sbjct: 380 -------NISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVR 432

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
             VSW  M++ Y Q  ++ +AI+L  +M   G +PD VT   ++ AC R+G ++ G+  F
Sbjct: 433 DEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYF 492

Query: 362 DSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           + M +     PS   ++ M+  +S+S   +EA+     M FR   PD      +LS+C  
Sbjct: 493 ELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFR---PDAIGWTTLLSACRN 549

Query: 417 MGILESGK 424
            G LE GK
Sbjct: 550 KGNLEIGK 557



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           ++  +  C  L +S   + +H  I +     + F+ + ++  Y        AR+ FD + 
Sbjct: 6   YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
             N  +WN ++  Y+++G+  E  R ++ +       D +T+  ++   S SGLV   V+
Sbjct: 66  QPNLFSWNNLLLAYSKSGHLSEMERTFEKL----PDRDGVTWNVLIEGYSLSGLVGAAVK 121

Query: 628 IFNSMQLD 635
            +N+M  D
Sbjct: 122 AYNTMMKD 129


>gi|297827565|ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327504|gb|EFH57924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 836

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 206/695 (29%), Positives = 357/695 (51%), Gaps = 54/695 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y   A++   CK+ DL  A ++FD+MP +++V+WN ++S L +NG   +AL ++  M 
Sbjct: 134 DVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEALRLFRDMH 193

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           +      H++L ++  A + L   +  R  HGLVIK G       ++ L+ +Y KC    
Sbjct: 194 SSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTSAF--SSGLIDMYCKCADLY 251

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VFEE+   +E ++  MM+  A      E LE+F +M    V ++ V+ +S L   A
Sbjct: 252 AAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAA 311

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G  +E                G  +H  T++ G  +D+ ++ SL++MY+K G+++ AE
Sbjct: 312 YVG-NLEK---------------GIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAE 355

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  + +R VVSW+ MIA + Q  Q  +A+ L + M    F+P+ VT  ++L  C    
Sbjct: 356 QLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVA 415

Query: 353 DIKTGREM-----------------------------------FDSMPSPSVSSWNAMLS 377
             + G+ +                                   F+ +P     ++NA+  
Sbjct: 416 ASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQ 475

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y+Q  +  +A  +++ M+  GV PD  T+  +L +CA       G  V+   +K     
Sbjct: 476 GYTQIGDASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDS 535

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
           + +VA  LI +++KC     A+ +F +   E   V WN M+ G  L+    EA   F+QM
Sbjct: 536 ECHVAHALIDMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQM 595

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           +  +  P   +F  ++ + A+L++   G  VH+ + + G+ +   VG++L++MY KCG I
Sbjct: 596 KVEKFQPNAVTFVNIVRAAAELAALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMI 655

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             +++ F  +  KN V+WN M+  YA +G  + AV L+  M  + +KPD ++F+++L+AC
Sbjct: 656 ESSKKCFIEIRNKNMVSWNTMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSAC 715

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
            H+GL + G  IF  M+  H +E  ++HY CM+D LG++G F EA  ++  M  K    +
Sbjct: 716 RHAGLAEEGKRIFKEMEERHKIEAKVEHYACMVDLLGKSGLFDEAVEMVRRMRVKASVGV 775

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           W  LL+S R+H N+ L+  A  +L +L+P N + Y
Sbjct: 776 WGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY 810



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 188/703 (26%), Positives = 324/703 (46%), Gaps = 63/703 (8%)

Query: 26  CNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNV 85
           C  L+ +  +C N      +   +    +   N +++A       + + K+ D +P   V
Sbjct: 5   CTTLLRMLRECKNFRLLLQIHGSLIVAGLKPHNQLINAYSLFQRPDLSRKIVDSVPYPGV 64

Query: 86  VSWNNLISALVRNGLEEKALSVYNKMSN-EGFVPTHITLASVFKASTALLDVEHGRRCHG 144
           V WN++I    R GL ++AL V+  MS  +G  P   T     KA    +D E G R H 
Sbjct: 65  VLWNSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHD 124

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
           L+ ++G + ++Y+  AL+ +Y K G    A  VF++M   + VT+  M+SGLA+     E
Sbjct: 125 LIAEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSE 184

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           AL +FR M    V ID VSL +++   ++              N   R +HG     L I
Sbjct: 185 ALRLFRDMHSSFVDIDHVSLYNLIPAVSK-----------LEKNDVCRCLHG-----LVI 228

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           K GF +    S+ L+DMY K  D+ +AE +F  +  +   SW  M+A Y       + +E
Sbjct: 229 KKGFTSA--FSSGLIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLE 286

Query: 325 LLQRMKSCGFEPDEVTS--------------------------------------INMLV 346
           L   M++     ++V +                                      INM  
Sbjct: 287 LFDVMRNYDVRMNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINMYS 346

Query: 347 ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
            C   G+++   ++F  +    V SW+AM++S+ Q+  H EA+ LFR+M     KP+  T
Sbjct: 347 KC---GELELAEQLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVT 403

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
           L  +L  CA +     GK +H  ++K     +   A+ +I +Y+KC       + F R+P
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLP 463

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
             D + +N++  G +      +AF  +K M+ + + P   +   +L +CA  S   +G  
Sbjct: 464 IKDAIAFNALAQGYTQIGDASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDYARGSC 523

Query: 527 VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNG 585
           V+ QI K G+ ++  V  ALI+M+ KC  +  A+  FD     K+TV+WN M++GY  +G
Sbjct: 524 VYGQIIKHGFDSECHVAHALIDMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMNGYLLHG 583

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
             +EA+  ++ M     +P+ +TFV I+ A +    + +G+ + +S+ +  G        
Sbjct: 584 QAEEAIATFRQMKVEKFQPNAVTFVNIVRAAAELAALSLGMSVHSSL-IQFGFCSHTPVG 642

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
             ++D   + G    ++    E+  K + V W  +LS+   H 
Sbjct: 643 NSLVDMYAKCGMIESSKKCFIEIRNK-NMVSWNTMLSAYAAHG 684



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 31/262 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  ++  I+++G   +  + + LI++++KC+   +A+ LFDK                  
Sbjct: 521 GSCVYGQIIKHGFDSECHVAHALIDMFTKCDALAAAKSLFDKCGF--------------- 565

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                          E++ VSWN +++  + +G  E+A++ + +M  E F P  +T  ++
Sbjct: 566 ---------------EKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNI 610

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A+  L  +  G   H  +I+ G   +  V N+L+ +YAKCG  + +   F E+   N 
Sbjct: 611 VRAAAELAALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKKCFIEIRNKNM 670

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD-VFAQ 245
           V++  M+S  A       A+ +F  M    +  DSVS  SVL  C   G   E   +F +
Sbjct: 671 VSWNTMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLAEEGKRIFKE 730

Query: 246 SDNKFSRNVHGQQVHCLTIKLG 267
            + +       +   C+   LG
Sbjct: 731 MEERHKIEAKVEHYACMVDLLG 752


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 207/629 (32%), Positives = 313/629 (49%), Gaps = 86/629 (13%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           K  +  N +LS +AK G    A  VF+E+ +P+ V++T M+ G         A+  F  M
Sbjct: 77  KTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRM 136

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
           +   +S    + ++VL  CA           AQ+ +       G++VH   +KLG    +
Sbjct: 137 VSSGISPTQFTFTNVLASCAA----------AQALDV------GKKVHSFVVKLGQSGVV 180

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            ++NSLL+MYAK GD   A+V+F  +  +   +WN MI+                 M+ C
Sbjct: 181 PVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMIS---------------MHMQFC 225

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
            F+                        +FD M  P + SWN++++ Y        A++ F
Sbjct: 226 QFD--------------------LALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETF 265

Query: 393 REM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
             M +   +KPD+ TL  +LS+CA    L+ GKQ+HA  ++    I   V + LI +Y+K
Sbjct: 266 SFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAK 325

Query: 452 CQRNELAERV---------------------------------FHRIPELDIVCWNSMIA 478
               E+A R+                                 F  +   D+V W +MI 
Sbjct: 326 SGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIV 385

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G + N L  +A + F+ M +    P  ++ A VLS  + L+S   G+Q+HA   +   V+
Sbjct: 386 GYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVS 445

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHG-KNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
            + VG+ALI MY + G I  AR+ F+ +   ++T+TW  MI   AQ+G G+EA+ L++ M
Sbjct: 446 SVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKM 505

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           +   +KPD IT+V +L+AC+H GLV+ G   FN M+  H +EP   HY CMID LGRAG 
Sbjct: 506 LRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGL 565

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
             EA   I  MP + D V W  LLSSCR+H  V LAK AAE+L  +DP NS  Y  LAN 
Sbjct: 566 LEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANT 625

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            S+ G+W+D   VR+ M +  + K+  +S
Sbjct: 626 LSACGKWEDAAKVRKSMKDKAVKKEQGFS 654



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 174/622 (27%), Positives = 287/622 (46%), Gaps = 114/622 (18%)

Query: 7   GKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ +HA I+++GL +   FL N L+ LY K  ++  A  LFD+MP K  +SWN ILSA  
Sbjct: 31  GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHA 90

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K+ +L+ A ++FDE+P+ + VSW  +I      GL + A+  + +M + G  PT  T  +
Sbjct: 91  KAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTN 150

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------------- 169
           V  +  A   ++ G++ H  V+K+G    + VAN+LL++YAKCG                
Sbjct: 151 VLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKD 210

Query: 170 ---WTKH------------AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              W               A+ +F++M++P+ V++ ++++G       + ALE F  M++
Sbjct: 211 TSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLK 270

Query: 215 -KAVSIDSVSLSSVLGVCA-REGCGVESDVFA---QSDNKFSRNVHGQQVHCLTIKLGFE 269
             ++  D  +L SVL  CA RE   +   + A   ++D   +  V G  +  +  K G  
Sbjct: 271 SSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAV-GNALISMYAKSGAV 329

Query: 270 ADLH--------------LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
              H                 SLLD Y K GD+D A  IF +L  R VV+W  MI GY Q
Sbjct: 330 EVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQ 389

Query: 316 KYQSTKAIELLQRMKSCGFEP-------------------------------DEVTSINM 344
               + A+ L + M   G +P                               +EV+S+++
Sbjct: 390 NGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSV 449

Query: 345 LVACV----RSGDIKTGREMFDSMPS-PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
             A +    RSG IK  R++F+ + S     +W +M+ S +Q     EAI+LF +M    
Sbjct: 450 GNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRIN 509

Query: 400 VKPDRTTLAIILSSCAAMGILESG-------KQVHAASLKTASHIDNYVASGLIGIYSKC 452
           +KPD  T   +LS+C  +G++E G       K VH     T+SH      + +I +  + 
Sbjct: 510 LKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIE-PTSSHY-----ACMIDLLGRA 563

Query: 453 QRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY---PTQ--- 505
              E A      +P E D+V W S+     L+S  +  ++   ++   ++    P     
Sbjct: 564 GLLEEAYNFIRNMPIEPDVVAWGSL-----LSSCRVHKYVDLAKVAAEKLLLIDPNNSGA 618

Query: 506 -FSFATVLSSCAKLSSSFQGRQ 526
             + A  LS+C K   + + R+
Sbjct: 619 YLALANTLSACGKWEDAAKVRK 640



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 128/276 (46%), Gaps = 49/276 (17%)

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA--IILSSCAAMGILESGKQVHAAS 430
           N +L+ Y ++ +  +A +LF EM      P +TT +   ILS+ A  G L+S        
Sbjct: 52  NNLLNLYVKTGSSSDAHRLFDEM------PLKTTFSWNTILSAHAKAGNLDS-------- 97

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
                                      A RVF  IP+ D V W +MI G +   L   A 
Sbjct: 98  ---------------------------ARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAV 130

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             F +M  + + PTQF+F  VL+SCA   +   G++VH+ + K G    + V ++L+ MY
Sbjct: 131 HAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMY 190

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            KCGD   A+  FD M  K+T TWN MI  + Q    D A+ L+  M      PD +++ 
Sbjct: 191 AKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQM----TDPDIVSWN 246

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
           +I+T   H G     +E F+ M     ++P  D +T
Sbjct: 247 SIITGYCHQGYDIRALETFSFMLKSSSLKP--DKFT 280



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 36/205 (17%)

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDG--YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           +L S  K    F GR +HA+I K G  Y+  +F+ + L+ +Y K G    A + FD M  
Sbjct: 18  LLQSAIKSRDPFIGRCIHARIIKHGLRYLG-VFLTNNLLNLYVKTGSSSDAHRLFDEMPL 76

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKD-------------------------------M 597
           K T +WN ++  +A+ G  D A R++ +                               M
Sbjct: 77  KTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRM 136

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           ++SG+ P   TF  +L +C+ +  +DVG ++ +S  +  G   ++     +++   + G 
Sbjct: 137 VSSGISPTQFTFTNVLASCAAAQALDVGKKV-HSFVVKLGQSGVVPVANSLLNMYAKCGD 195

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLS 682
              A+++ D M  KD    W  ++S
Sbjct: 196 SVMAKVVFDRMRLKDTST-WNTMIS 219


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 180/605 (29%), Positives = 325/605 (53%), Gaps = 51/605 (8%)

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VF+EM E N V+F  ++ G A++++ +EA E+F  +  +   ++    ++VL +      
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKL------ 55

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                + +    +  R VHG       +K+G+ ++  +  +L+D Y+ +G +  A  +F 
Sbjct: 56  -----LVSMEWAELGRIVHG-----CVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFD 105

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------- 349
            +  + +VSW  MIA Y +    ++A+E   +M+  GF+P+  T   +L AC+       
Sbjct: 106 EISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDA 165

Query: 350 ----------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                                       R GD       F  MP   V  W+ M+S ++Q
Sbjct: 166 GKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQ 225

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           S   ++A+++F +M+   V P++ T + +L + A +  L+  K +H  +LK     D +V
Sbjct: 226 SGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFV 285

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
           ++ L+  Y+KC   E +  +F  + + + V WN++I           A   F  M + ++
Sbjct: 286 SNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQV 345

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
             T+ +++++L +CA L++   G QVH    K  Y  D+ VG+ALI+MY KCG I  AR 
Sbjct: 346 QATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARF 405

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            FDM+  ++ V+WN +I GY+ +G G EA++++  M  +  KPD++TFV +L+ACS++G 
Sbjct: 406 MFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGR 465

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           +D G + F SM+ D+G+EP ++HYTCM+  +GR+G+  +A   I+++P +   +IW  LL
Sbjct: 466 LDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALL 525

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
            +C +H +V L + +A+ +  L+P++ A + LL+NIY+   RW ++  VR+ M    + K
Sbjct: 526 GACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKK 585

Query: 742 DPAYS 746
           +P  S
Sbjct: 586 EPGLS 590



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 240/494 (48%), Gaps = 51/494 (10%)

Query: 76  LFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD 135
           +FDEMPERN VS+  LI    ++    +A  ++ ++  EG         +V K   ++  
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
            E GR  HG V+K+G   N ++  AL+  Y+  G    A  VF+E+S  + V++T M++ 
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
            A+ D   EALE F  M       ++ + + VL  C     G+++         F     
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACL----GLQN---------FDA--- 165

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ VHC  +K  +E DL++   LL++Y + GD D A   F ++P+  V+ W+ MI+ + Q
Sbjct: 166 GKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQ 225

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVT--SI------------------------------- 342
             QS KA+E+  +M+     P++ T  S+                               
Sbjct: 226 SGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFV 285

Query: 343 -NMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
            N L+AC  + G I+   E+F+++   +  SWN ++ SY Q  + + A+ LF  M    V
Sbjct: 286 SNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQV 345

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           +    T + IL +CA +  LE G QVH  + KT    D  V + LI +Y+KC   + A  
Sbjct: 346 QATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARF 405

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           +F  +   D V WN++I G S++ L +EA   F  M++ +  P + +F  VLS+C+    
Sbjct: 406 MFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGR 465

Query: 521 SFQGRQVHAQIEKD 534
             +G+Q    +++D
Sbjct: 466 LDEGKQYFTSMKQD 479



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 222/432 (51%), Gaps = 39/432 (9%)

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE---VTSINMLVA-- 347
           ++F  +PER+ VS+  +I GY Q  +  +A EL  R+   G E +     T + +LV+  
Sbjct: 1   MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60

Query: 348 ----------CVR--------------------SGDIKTGREMFDSMPSPSVSSWNAMLS 377
                     CV                     SG +   RE+FD + S  + SW  M++
Sbjct: 61  WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
           SY++++   EA++ F +M+  G KP+  T A +L +C  +   ++GK VH + LKT    
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D YV  GL+ +Y++C  N+ A R F  +P+ D++ W+ MI+  + +    +A   F QMR
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           +  + P QF+F++VL + A + S    + +H    K G   D+FV +AL+  Y KCG I 
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            + + F+ +  +N V+WN +I  Y Q G G+ A+ L+ +M+   V+  ++T+ +IL AC+
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360

Query: 618 HSGLVDVGVEIFN-SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
               +++G+++   + +  +G +  + +   +ID   + G   +A  + D +  + D V 
Sbjct: 361 TLAALELGLQVHCLTAKTIYGQDVAVGN--ALIDMYAKCGSIKDARFMFDMLDLR-DKVS 417

Query: 677 WEVLLSSCRLHA 688
           W  ++    +H 
Sbjct: 418 WNAIICGYSMHG 429



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 206/424 (48%), Gaps = 55/424 (12%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AGK +H  +L+     D ++   L+ELY++C +                           
Sbjct: 165 AGKTVHCSVLKTNYERDLYVGVGLLELYTRCGD--------------------------- 197

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +DD   A++ F +MP+ +V+ W+ +IS   ++G  EKAL ++ +M     +P   T +S
Sbjct: 198 -NDD---AWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSS 253

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V +AS  +  ++  +  HG  +K GL  +++V+NAL++ YAKCG  + ++ +FE +S+ N
Sbjct: 254 VLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRN 313

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +V++  ++    +      AL +F  M+R  V    V+ SS+L  CA             
Sbjct: 314 DVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA------------- 360

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +    G QVHCLT K  +  D+ + N+L+DMYAK G +  A  +F  L  R  VS
Sbjct: 361 ---TLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVS 417

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN +I GY       +AI++   MK    +PDE+T + +L AC  +G +  G++ F SM 
Sbjct: 418 WNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMK 477

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P +  +  M+    +S N  +A+K   ++ F   +P       +L +C     +
Sbjct: 478 QDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPF---EPSVMIWRALLGACVIHNDV 534

Query: 421 ESGK 424
           E G+
Sbjct: 535 ELGR 538



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 233/520 (44%), Gaps = 87/520 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H  +L+ G   +TF+   LI+ YS                                
Sbjct: 65  GRIVHGCVLKVGYGSNTFIGTALIDAYSV------------------------------- 93

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S  +  A ++FDE+  +++VSW  +I++   N    +AL  +++M   GF P + T A V
Sbjct: 94  SGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGV 153

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L + + G+  H  V+K   ++++YV   LL LY +CG    A   F +M + + 
Sbjct: 154 LKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDV 213

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           + ++ M+S  A++ +  +ALE+F  M R  V  +  + SSVL   A     +ES      
Sbjct: 214 IPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASA----DIES------ 263

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S+ +HG       +K G   D+ +SN+L+  YAK G ++ +  +F  L +R+ VSW
Sbjct: 264 -LDLSKTIHGH-----ALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSW 317

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           N +I  Y Q     +A+ L   M     +  EVT  ++L AC                  
Sbjct: 318 NTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAK 377

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G IK  R MFD +      SWNA++  YS      EAIK+
Sbjct: 378 TIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKM 437

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIY 449
           F  M+    KPD  T   +LS+C+  G L+ GKQ +  S+K    I+  +   + ++ + 
Sbjct: 438 FNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ-YFTSMKQDYGIEPCMEHYTCMVWLM 496

Query: 450 SKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIE 488
            +    + A +    IP E  ++ W +++    +++ D+E
Sbjct: 497 GRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHN-DVE 535



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 17/243 (6%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D+   NA++    K   ++ A  +FD +  R+ VSWN +I     +GL  +A+ ++N M
Sbjct: 382 QDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLM 441

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCH-GLVIKIGLDKNIYVANALLSLYAKCGW 170
                 P  +T   V  A +    ++ G++    +    G++  +     ++ L  + G 
Sbjct: 442 KETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGN 501

Query: 171 TKHAVPVFEEMS-EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDS------VS 223
              AV   E++  EP+ + + A++      + V    E+ R+  ++ + ++       V 
Sbjct: 502 LDQAVKFIEDIPFEPSVMIWRALLGACVIHNDV----ELGRISAQRVLELEPRDEASHVL 557

Query: 224 LSSVLGVCAREG--CGVESDVFAQSDNK---FSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
           LS++     R G    V   +  +   K    S   +   VHC T+     ADL L N +
Sbjct: 558 LSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGM 617

Query: 279 LDM 281
           L+ 
Sbjct: 618 LEF 620


>gi|347954454|gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta]
          Length = 824

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 231/781 (29%), Positives = 366/781 (46%), Gaps = 118/781 (15%)

Query: 6   AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            G+ +HA IL+NG F   + ++  +L+  Y+KC                           
Sbjct: 80  TGQQIHARILKNGDFYARNEYIETKLVIFYAKC--------------------------- 112

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
               D LE A  LF ++  RNV SW  +I    R GL E AL  + +M   G  P +  +
Sbjct: 113 ----DALEVAEVLFSKLRVRNVFSWAAIIGVKCRIGLVEGALMGFVEMLENGIFPDNFVV 168

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +V KA  AL     GR  HG V K GL   ++VA++L  +Y KCG    A  VF+E+ E
Sbjct: 169 PNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPE 228

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V + A+M G  +     EA+ +   M ++ V    V++S+ L   A    G+E    
Sbjct: 229 RNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPTRVTVSTCLSASANMR-GIE---- 283

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q H + I  G E D  L  S+L+ Y K G +D AE+IF  + E+ V
Sbjct: 284 -----------EGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFDRMIEKDV 332

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---- 359
           V+WN++I+GY  +     AI + Q M+    + D VT   ++ A  R+ ++K G+E    
Sbjct: 333 VTWNLLISGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEVQCY 392

Query: 360 -------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                          +FDS     +  WN +L++Y++S    EA
Sbjct: 393 CIRHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEA 452

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           ++LF EMQ   V P+  T  +I+ S    G +   K++    ++++    N         
Sbjct: 453 LRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMF-LQMQSSGTFPN--------- 502

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
                                ++ W +M+ GL  N    EA +F ++M+++ M P  FS 
Sbjct: 503 ---------------------MISWTTMMNGLVQNGCSEEAILFLRKMQESGMRPNVFSI 541

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              LS+C  L+S   GR +H  I ++  + +   + ++L++MY KCGDI  A + F    
Sbjct: 542 TVALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDINKAERVFGSKL 601

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS-GVKPDDITFVAILTACSHSGLVDVGV 626
                 +N MI  YA  G   EAV LY+ +    G+KPD+IT   +L+AC+H+G ++  +
Sbjct: 602 YSELPLYNAMISAYALYGNVKEAVALYRSLEEDVGIKPDNITITNVLSACNHAGDINQAI 661

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           EIF  M   HG++P L+HY  M+D L  AG   +A  LI+EMP K D  + + L++SC+ 
Sbjct: 662 EIFTDMVSKHGMKPCLEHYGLMVDLLASAGETEKALSLIEEMPYKPDARMIQSLVASCKK 721

Query: 687 HAN-VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
             +   L    + +L   +P+NS  Y  ++N Y+  G WD++  +RE+M    + K P  
Sbjct: 722 QQHKSELMDYLSSQLLESEPENSGNYVRVSNAYAVEGSWDEVVKMREMMKVKGLKKKPGC 781

Query: 746 S 746
           S
Sbjct: 782 S 782



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 159/716 (22%), Positives = 293/716 (40%), Gaps = 123/716 (17%)

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           +S+ CK+ ++  A  L  EM  RN           +R G E                   
Sbjct: 34  VSSLCKNGEIREALSLVTEMDFRN-----------LRIGPE------------------- 63

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIG--LDKNIYVANALLSLYAKCGWTKHAVPVF 178
                + +      D+  G++ H  ++K G    +N Y+   L+  YAKC   + A  +F
Sbjct: 64  -IFGEILQGCVYXRDLRTGQQIHARILKNGDFYARNEYIETKLVIFYAKCDALEVAEVLF 122

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            ++   N  ++ A++    +   V  AL  F  M+   +  D+  + +V   C       
Sbjct: 123 SKLRVRNVFSWAAIIGVKCRIGLVEGALMGFVEMLENGIFPDNFVVPNVCKACG------ 176

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                A   ++F R VHG        K G    + +++SL DMY K G +D A  +F  +
Sbjct: 177 -----ALQWSRFGRGVHG-----YVAKAGLHDCVFVASSLADMYGKCGVLDDARKVFDEI 226

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
           PER+VV+WN ++ GY Q   + +AI LL  M+  G EP  VT    L A      I+ G+
Sbjct: 227 PERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPTRVTVSTCLSASANMRGIEEGK 286

Query: 359 E-----------------------------------MFDSMPSPSVSSWNAMLSSYSQSE 383
           +                                   +FD M    V +WN ++S Y    
Sbjct: 287 QSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFDRMIEKDVVTWNLLISGYVHQG 346

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
             + AI + + M+   +K D  TL+ ++S+ A    L+ GK+V    ++ +   D  +AS
Sbjct: 347 LVENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLAS 406

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
             + +Y+KC     A++VF    + D++ WN+++A  + + L  EA   F +M+   + P
Sbjct: 407 TAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPP 466

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              ++  ++ S  +     + +++  Q++  G                            
Sbjct: 467 NVITWNLIILSLLRNGQVNEAKEMFLQMQSSGTF-------------------------- 500

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
                 N ++W  M++G  QNG  +EA+   + M  SG++P+  +    L+AC +   + 
Sbjct: 501 -----PNMISWTTMMNGLVQNGCSEEAILFLRKMQESGMRPNVFSITVALSACVNLASLH 555

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G  I   +  +          T ++D   + G  ++AE +       + P ++  ++S+
Sbjct: 556 FGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDINKAERVFGSKLYSELP-LYNAMISA 614

Query: 684 CRLHANVRLA---KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
             L+ NV+ A    R+ EE   + P N      + N+ S+     D+    E+ ++
Sbjct: 615 YALYGNVKEAVALYRSLEEDVGIKPDNIT----ITNVLSACNHAGDINQAIEIFTD 666



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 166/324 (51%), Gaps = 14/324 (4%)

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           +PS +S+   +SS  ++   +EA+ L  EM FR ++        IL  C     L +G+Q
Sbjct: 24  NPSSTSYFHRVSSLCKNGEIREALSLVTEMDFRNLRIGPEIFGEILQGCVYXRDLRTGQQ 83

Query: 426 VHAASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           +HA  LK       + Y+ + L+  Y+KC   E+AE +F ++   ++  W ++I      
Sbjct: 84  IHARILKNGDFYARNEYIETKLVIFYAKCDALEVAEVLFSKLRVRNVFSWAAIIGVKCRI 143

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
            L   A M F +M +N ++P  F    V  +C  L  S  GR VH  + K G  + +FV 
Sbjct: 144 GLVEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVA 203

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           S+L +MY KCG +  AR+ FD +  +N V WN ++ GY QNG  +EA+RL  DM   GV+
Sbjct: 204 SSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVE 263

Query: 604 PDDITFVAILTACSHSGLVDVG-----VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
           P  +T    L+A ++   ++ G     + I N ++LD+ +   + ++ C      + G  
Sbjct: 264 PTRVTVSTCLSASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYC------KVGLI 317

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLS 682
             AEM+ D M  + D V W +L+S
Sbjct: 318 DYAEMIFDRM-IEKDVVTWNLLIS 340


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 219/739 (29%), Positives = 345/739 (46%), Gaps = 115/739 (15%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF-EEM 181
           LA   ++  A   +   R  H  +I +GL   +++ N LL  Y  CG    A  +  +E+
Sbjct: 28  LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSV------------------ 222
           +EPN +T   MM+G AK   + +A+E+F R+  R   S +++                  
Sbjct: 88  TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147

Query: 223 -------------SLSSVLGVCAREG--------CGVESDVFAQSDNKFSRNVHGQQVHC 261
                        +   V+  C   G         G+ S   +Q D      +    V C
Sbjct: 148 SMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRC 207

Query: 262 LTIKLGFE-------ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
             +    +         +   NS+L  YAK+  +D A  IF ++PER VVSWN++I+   
Sbjct: 208 GAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALS 267

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-------------- 360
           +  +  +A++++  M   G  PD  T  + L AC R   ++ G+++              
Sbjct: 268 KSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPY 327

Query: 361 ---------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                                F S+   +  SW  ++  + Q     E+++LF +M+   
Sbjct: 328 VASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAEL 387

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           +  D+  LA ++S C     +  G Q+H+  LK+       V++ LI +Y+KC   + AE
Sbjct: 388 MAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAE 447

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR---------------------- 497
            +F+ + E DIV W  MI   S      +A  FF  M                       
Sbjct: 448 LIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEED 507

Query: 498 ----------QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
                     + ++ P   ++ T+   CA + ++  G Q+     K G + D  V +A+I
Sbjct: 508 GLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVI 567

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
            MY KCG I  AR+ FD +  K+ V+WN MI GY+Q+G G +A+ ++ D++  G KPD I
Sbjct: 568 TMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYI 627

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           ++VA+L+ CSHSGLV+ G   F+ M+ DH + P L+H++CM+D LGRAGH  EA+ LIDE
Sbjct: 628 SYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDE 687

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
           MP K    +W  LLS+C+ H N  LA+ AA+ LF LD   S  Y LLA +Y+  G+ DD 
Sbjct: 688 MPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDS 747

Query: 728 RAVRELMSENCIVKDPAYS 746
             VR+LM +  I K P YS
Sbjct: 748 AQVRKLMRDKGIKKSPGYS 766



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 164/576 (28%), Positives = 274/576 (47%), Gaps = 60/576 (10%)

Query: 21  DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEM 80
           DD  +   L+++  +C     A   F ++ +  I   N++L    KS  ++ A ++F  M
Sbjct: 192 DDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSM 251

Query: 81  PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           PER+VVSWN +ISAL ++G   +AL +   M  +G  P   T  S   A   L  +E G+
Sbjct: 252 PERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGK 311

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           + H  VI+     + YVA+A++ LYAKCG  K A  VF  + + N V++T ++ G  +  
Sbjct: 312 QLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYG 371

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              E++E+F  M  + +++D  +L++++      GC    D+             G Q+H
Sbjct: 372 CFSESVELFNQMRAELMAVDQFALATLI-----SGCCNTMDI-----------CLGSQLH 415

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            L +K G    + +SNSL+ MYAK G++ +AE+IF+ + ER +VSW  MI  Y Q     
Sbjct: 416 SLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQ----- 470

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                                          G+I   RE FD M + +V +WNAML +Y 
Sbjct: 471 ------------------------------VGNIAKAREFFDDMSTRNVITWNAMLGAYI 500

Query: 381 QSENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           Q    ++ +K++ +M   + V PD  T   +   CA +G  + G Q+   ++K    +D 
Sbjct: 501 QHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDT 560

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            V + +I +YSKC R   A + F  +   D+V WN+MI G S + +  +A   F  +   
Sbjct: 561 SVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNK 620

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG----SALIEMYCKCGD 555
              P   S+  VLS C+      +G+     +++D   ++I  G    S ++++  + G 
Sbjct: 621 GAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRD---HNISPGLEHFSCMVDLLGRAGH 677

Query: 556 IYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEA 590
           +  A+   D M  K T   W  ++     +G  D A
Sbjct: 678 LIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLA 713



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 147/277 (53%), Gaps = 4/277 (1%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH+  L++G      + N LI +Y+KC N  +A+ +F+ M  +DI SW  +++A  +
Sbjct: 411 GSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQ 470

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLAS 125
             ++  A + FD+M  RNV++WN ++ A +++G EE  L +Y+ M  E   +P  +T  +
Sbjct: 471 VGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVT 530

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +F+    +   + G +  G  +K+GL  +  V NA++++Y+KCG    A   F+ +S  +
Sbjct: 531 LFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKD 590

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM++G ++     +A+E+F  ++ K    D +S  +VL  C+  G  VE   F  
Sbjct: 591 LVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGL-VEEGKFYF 649

Query: 246 SDNKFSRNVHGQQVH--CLTIKLGFEADLHLSNSLLD 280
              K   N+     H  C+   LG    L  + +L+D
Sbjct: 650 DMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLID 686



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 11/188 (5%)

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
           + M  TQ + A  L SC   S+    R +H+++   G  + +F+ + L+  Y  CG +  
Sbjct: 20  SHMAITQ-ALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSD 78

Query: 559 ARQFF-DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
           AR    D +   N +T N M++GYA+ G   +AV L+  M    V     ++  I++   
Sbjct: 79  ARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVA----SWNTIMSGYY 134

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM----LIDEMPCKDD 673
            SG     ++IF SM+      P    + C++   G  G +HE  +    L+ +   +DD
Sbjct: 135 QSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALG-WHEVALQLLGLLSKFDSQDD 193

Query: 674 PVIWEVLL 681
           P +   L+
Sbjct: 194 PDVQTALV 201



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 61/116 (52%), Gaps = 4/116 (3%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A+  G  +  H ++ GL  DT + N +I +YSKC     A+  FD +  KD+ SWNA+++
Sbjct: 540 ANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMIT 599

Query: 63  AQCKSDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
              +    + A ++FD++  +    + +S+  ++S    +GL E+    ++ M  +
Sbjct: 600 GYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRD 655


>gi|357518009|ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355523315|gb|AET03769.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 672

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 231/758 (30%), Positives = 357/758 (47%), Gaps = 131/758 (17%)

Query: 30  IELYSKCNNTHSAQHLFDKMP-----HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERN 84
           +EL+S C     A+ L   +      H  + + N +L    +   L  A KLFDEMP+ N
Sbjct: 1   MELHSVCRTIREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPN 60

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
             SWN LI A +  G   K+L +++ M ++    TH                        
Sbjct: 61  PFSWNTLIEAHINLGHRNKSLELFHAMPHK----TH------------------------ 92

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
                      Y  N ++S  +K G  + A  +F  M   N + + +M+ G ++      
Sbjct: 93  -----------YSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRN 141

Query: 205 ALEMFRLM---IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
           +L +F+ M     + V  D+  LS+V G CA        D+FA           G+QVH 
Sbjct: 142 SLLLFKEMNLDPLETVHRDAFVLSTVFGACA--------DLFALD--------CGKQVHA 185

Query: 262 LTIKLGFE--ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
                GFE   D  L +S+++ Y K GD+DSA  +   + E    S + +++GY      
Sbjct: 186 RVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYAN---- 241

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
                                          +G +   R++FD+   P    WN+++S Y
Sbjct: 242 -------------------------------AGRMSDARKVFDNKVDPCSVLWNSIISGY 270

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
             +    EA+ LF +M+  GV  D + +A ILS  +++  +E  KQ+H  + K  +  D 
Sbjct: 271 VSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGATHDI 330

Query: 440 YVASGLIGIYSKCQ-------------------------------RNELAERVFHRIPEL 468
            VAS L+  YSKCQ                               R E A+ VF+ +P  
Sbjct: 331 VVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNK 390

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
            ++ WNS++ GL+ N+   EA   F  M + ++   +FSFA+V+S+CA  SS   G Q+ 
Sbjct: 391 TLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLF 450

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
            +    G  +D  + ++L++ YCKCG +   R+ FD M   + V+WN M+ GYA NGYG 
Sbjct: 451 GKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGI 510

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
           EA+ L+ +M  SGV+P  ITF  IL+AC H GLV+ G ++F +M+ D+ + P ++HY+CM
Sbjct: 511 EALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCM 570

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           +D   R G F EA  LI+EMP + D  +W  +L  C  H N  + K AAE++ +LDP NS
Sbjct: 571 VDLFARVGCFGEAMYLIEEMPFQADANMWLSVLRGCVSHGNKTIGKMAAEKIIQLDPGNS 630

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             Y  L+NI ++   W+    VRELM    + K P  S
Sbjct: 631 GAYIQLSNILATSEDWEGSAEVRELMRNKNVQKIPGCS 668



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 208/456 (45%), Gaps = 57/456 (12%)

Query: 7   GKLLHAHILRNGL-FD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           GK +HA +  +G  F+ D  LC+ ++  Y KC +  SA  +   +   D +S +A++S  
Sbjct: 180 GKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGY 239

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
             +  +  A K+FD   +   V WN++IS  V NG E +AL+++NKM   G       +A
Sbjct: 240 ANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVA 299

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK----------------- 167
           ++   S++LL+VE  ++ H    KIG   +I VA+ LL  Y+K                 
Sbjct: 300 NILSISSSLLNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKVY 359

Query: 168 --------------CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
                         CG  + A  VF  M     +++ +++ GL +     EAL+ F +M 
Sbjct: 360 DAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMN 419

Query: 214 RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
           +  V +D  S +SV+  CA     ++S +             G+Q+    I LG E+D  
Sbjct: 420 KLDVKMDKFSFASVISACA-----IKSSLEL-----------GEQLFGKAITLGLESDQI 463

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           +  SL+D Y K G ++    +F  + +   VSWN M+ GY       +A+ L   M   G
Sbjct: 464 ICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSG 523

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEA 388
             P  +T   +L AC   G ++ GR++F +M      +P +  ++ M+  +++     EA
Sbjct: 524 VRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEA 583

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           + L  EM F+    D      +L  C + G    GK
Sbjct: 584 MYLIEEMPFQA---DANMWLSVLRGCVSHGNKTIGK 616



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 130/542 (23%), Positives = 227/542 (41%), Gaps = 126/542 (23%)

Query: 7   GKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMP--------------- 50
            + LH  +L+ G L       NRL++LYS+  + H A  LFD+MP               
Sbjct: 13  ARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLIEAHI 72

Query: 51  ----------------HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISA 94
                           HK  YSWN I+S   KS DL+ A  LF+ MP +N + WN++I  
Sbjct: 73  NLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIHG 132

Query: 95  LVRNGLEEKALSVYNKMSNEGFVPTH---ITLASVFKASTALLDVEHGRRCHGLVI---- 147
             R+G    +L ++ +M+ +     H     L++VF A   L  ++ G++ H  V     
Sbjct: 133 YSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGF 192

Query: 148 ---------------------------KIGLDKNI--YVANALLSLYAKCGWTKHAVPVF 178
                                       +G  K +  +  +AL+S YA  G    A  VF
Sbjct: 193 EFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVF 252

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE---- 234
           +   +P  V + +++SG       +EAL +F  M R  V  D  +++++L + +      
Sbjct: 253 DNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLNVE 312

Query: 235 ----------GCGVESDVFAQSD--NKFSRNVHGQQVHCLTIKLGFEADLH---LSNSLL 279
                       G   D+   S   + +S+  H       + KL  E  ++   L N+++
Sbjct: 313 LVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHD----SCKLFHELKVYDAILLNTMI 368

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK--------- 330
            +Y   G ++ A+ +F+++P ++++SWN ++ G  Q    ++A++    M          
Sbjct: 369 TVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKF 428

Query: 331 --------------------------SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
                                     + G E D++   +++    + G ++ GR++FD M
Sbjct: 429 SFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGM 488

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
                 SWN ML  Y+ +    EA+ LF EM + GV+P   T   ILS+C   G++E G+
Sbjct: 489 IKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGR 548

Query: 425 QV 426
            +
Sbjct: 549 DL 550


>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
          Length = 766

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 196/667 (29%), Positives = 348/667 (52%), Gaps = 60/667 (8%)

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIG-------LDKNIYVANALLSLYAKCGWTKHAVP 176
           A++  A + L  +  GRR H  ++          L  N  + N L+++Y +C     A  
Sbjct: 48  AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQ 107

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VF+EM   N V++ ++++   +  R  +AL +F  M+R   + D  +L S +  C   G 
Sbjct: 108 VFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG- 166

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
               DV             G+QVH   +K    +DL + N+L+ MY+KNG +D   ++F 
Sbjct: 167 ----DVGT-----------GRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFE 211

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-----------------KSCGF----- 334
            + ++ ++SW  +IAG+ Q+    +A+++ ++M                 ++CG      
Sbjct: 212 RIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWE 271

Query: 335 --EPDEVTSI------NMLVAC------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
             E     SI      ++ V C       R  ++ + R  F  + +P + SWN+++++YS
Sbjct: 272 YGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYS 331

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
                 EA+ LF EM+  G++PD  T+  +L +C     L  G+ +H+  +K     D  
Sbjct: 332 VEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVS 391

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           V + L+ +Y++C     A  VFH I + D+V WNS++   + ++   E    F  + ++E
Sbjct: 392 VCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSE 451

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
               + S   VLS+ A+L      +QVHA   K G V+D  + + LI+ Y KCG +  A 
Sbjct: 452 PSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAM 511

Query: 561 QFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           + F++M + ++  +W+ +I GYAQ GY  EA+ L+  M + G++P+ +TF+ +LTACS  
Sbjct: 512 RLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRV 571

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           G V+ G   ++ M+ ++G+ P  +H +C++D L RAG   EA   ID+MP + D ++W+ 
Sbjct: 572 GFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKT 631

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL++ ++H ++ + KRAAE +  +DP +SA Y LL NIY++ G W++   +++ M  + +
Sbjct: 632 LLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGV 691

Query: 740 VKDPAYS 746
            K P  S
Sbjct: 692 KKSPGKS 698



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 175/677 (25%), Positives = 295/677 (43%), Gaps = 127/677 (18%)

Query: 7   GKLLHAHILRNG-------LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           G+ +H H++ +        L  +T L N LI +Y +C    SA+                
Sbjct: 63  GRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR---------------- 106

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
                          ++FDEMP RN VSW ++I+A V+NG    AL +++ M   G    
Sbjct: 107 ---------------QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAAD 151

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
              L S  +A T L DV  GR+ H   +K     ++ V NAL+++Y+K G       +FE
Sbjct: 152 QFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFE 211

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGV 238
            + + + +++ ++++G A+    +EAL++FR MI +     +     S    C   G   
Sbjct: 212 RIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSW- 270

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                           +G+Q+H L+IK   + DL++  SL DMYA+  ++DSA V F  +
Sbjct: 271 ---------------EYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRI 315

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------- 349
               +VSWN ++  Y  +   ++A+ L   M+  G  PD +T   +L ACV         
Sbjct: 316 EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGR 375

Query: 350 --------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                     R  D+ +  ++F  +    V +WN++L++ +Q  
Sbjct: 376 LIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHN 435

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
           + +E +KLF  +       DR +L  +LS+ A +G  E  KQVHA + K     D  +++
Sbjct: 436 HPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSN 495

Query: 444 GLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
            LI  Y+KC   + A R+F  +    D+  W+S+I G +      EA   F +MR   + 
Sbjct: 496 TLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIR 555

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQ 561
           P   +F  VL++C+++    +G   ++ +E + G V      S ++++  + G +  A  
Sbjct: 556 PNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAAN 615

Query: 562 FFDMM-HGKNTVTW----------NEMIHG------------------------YAQNGY 586
           F D M    + + W          N+M  G                        YA +G 
Sbjct: 616 FIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGN 675

Query: 587 GDEAVRLYKDMIASGVK 603
            +E  RL K M  SGVK
Sbjct: 676 WNEFARLKKAMRTSGVK 692



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 10/173 (5%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDG-------YVNDIFVGSALIEMYCKCGDIYGAR 560
           +A ++S+C++L S  QGR+VH  +              +  +G+ LI MY +C     AR
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           Q FD M  +N V+W  +I  + QNG   +A+ L+  M+ SG   D     + + AC+  G
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166

Query: 621 LVDVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
            V  G ++  ++++ + G + I+ +   ++    + G   +  ML + +  KD
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQN--ALVTMYSKNGLVDDGFMLFERIKDKD 217


>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 201/692 (29%), Positives = 348/692 (50%), Gaps = 53/692 (7%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           +E A + FDEMP R+VVSW  ++SA ++N   E+AL +++ M   G  P   T +S+ ++
Sbjct: 70  VEHARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRS 129

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
             AL D  +G+R H   IK G + N  + ++L+ LY++   T+ A  +F  M   + V++
Sbjct: 130 CFALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSW 189

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           T +++   +  +   AL ++  M+   VS +  +   +L   A    G++          
Sbjct: 190 TTVIASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLA--ASSFIGLQ---------- 237

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                +G+ +H   I LG + +L L  +L++MY++   ++ A  +    PE  V+ W  +
Sbjct: 238 -----YGKLIHAHAIVLGVKLNLVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAI 292

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-----------RSGDIKTGR 358
           I+G  Q  +  +A+    +M+  G      T ++ML  C+            S  I+TG 
Sbjct: 293 ISGLAQNMKFQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGL 352

Query: 359 E-------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
           E                         MF  + SP+V SW ++++ +++    ++++ LF 
Sbjct: 353 EDDVPVGNALVDMYMKCSCIVEHGLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFM 412

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           EM+  GV+P+  TL+I+L  C+A+       ++H   +KT +  D  V + L+  Y+   
Sbjct: 413 EMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSG 472

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
           R + A RV   + + D + + S+   L+       A      M   ++    FS     S
Sbjct: 473 RVDDAWRVVKDMNQRDSITYTSLATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFFS 532

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           + A L     G+Q+H    K G    + V + LI++Y K G ++ AR+ F  +   + V+
Sbjct: 533 ASASLGRIETGKQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVVS 592

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN +I G A NG+   A+  + DM   G++PD ITF+ +L+ CSH GLVD+G++ F+SM+
Sbjct: 593 WNGLISGLASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMR 652

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
             H VEP  DHY C++D LGRAG   EA  +I+ MP + D  I++ LL++C +H N+ L 
Sbjct: 653 EMHDVEPQSDHYVCLVDILGRAGRLEEAMNIIETMPLEPDASIYKTLLAACSIHRNMNLG 712

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
           +  A     L+P + A + LL  +Y   GR+D
Sbjct: 713 EDVARRGLELNPLDPAFHLLLVKLYDDCGRYD 744



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 157/603 (26%), Positives = 281/603 (46%), Gaps = 53/603 (8%)

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           L  ++ G   H  +IK+GL  ++Y+ N LLSLY+KC   +HA   F+EM   + V++T +
Sbjct: 32  LKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVSWTGI 91

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           +S   K +R  EAL++F  M+      ++ + SS+L  C           FA  D  FS 
Sbjct: 92  LSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSC-----------FALGD--FS- 137

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
             +G+++H  +IK GFE++  L +SL+D+Y++    + A  +FS +     VSW  +IA 
Sbjct: 138 --YGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIAS 195

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------------ 348
             Q  + + A+ +   M       +E T + +L A                         
Sbjct: 196 CVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIGLQYGKLIHAHAIVLGVKLNL 255

Query: 349 ----------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                      R   I+   ++    P   V  W A++S  +Q+   +EA+  F +M+  
Sbjct: 256 VLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEIS 315

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ-RNEL 457
           GV     T   +LS C ++  L+ G+Q+H+  ++T    D  V + L+ +Y KC    E 
Sbjct: 316 GVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEH 375

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
             R+F  I   +++ W S+IAG + +    ++   F +MR   + P  F+ + VL  C+ 
Sbjct: 376 GLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSA 435

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           + S +Q  ++H  I K     D+ VG+AL++ Y   G +  A +    M+ ++++T+  +
Sbjct: 436 IKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSL 495

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
                Q GY + A+ +   M  + VK D  +     +A +  G ++ G ++ +   L  G
Sbjct: 496 ATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQL-HCYSLKSG 554

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           +   L     +ID  G+ G  HEA     E+  + D V W  L+S    + ++  A  A 
Sbjct: 555 LSCCLSVANGLIDLYGKYGLVHEARRAFTEIT-EPDVVSWNGLISGLASNGHISSALSAF 613

Query: 698 EEL 700
           +++
Sbjct: 614 DDM 616



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 120/518 (23%), Positives = 228/518 (44%), Gaps = 91/518 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKL+HAH +  G+  +  L   L+ +YS+C     A  +    P  D+  W AI      
Sbjct: 239 GKLIHAHAIVLGVKLNLVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAI------ 292

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    IS L +N   ++A++ ++KM   G   ++ T  S+
Sbjct: 293 -------------------------ISGLAQNMKFQEAVAAFHKMEISGVSASNFTYLSM 327

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW-TKHAVPVFEEMSEPN 185
                ++L ++ GR+ H  VI+ GL+ ++ V NAL+ +Y KC    +H + +F  +  PN
Sbjct: 328 LSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMFRGIKSPN 387

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++T++++G A+     ++L +F  M    V  +S +LS VL VC+           A 
Sbjct: 388 VISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCS-----------AI 436

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +  +HG       IK   + D+ + N+L+D YA +G +D A  +  ++ +R  ++
Sbjct: 437 KSPYQTLKLHGH-----IIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSIT 491

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
           +  +     Q      A+ ++  M +   + D  +      A    G I+TG+++     
Sbjct: 492 YTSLATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYSL 551

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         F  +  P V SWN ++S  + + +   A+ 
Sbjct: 552 KSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSALS 611

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI----DNYVASGLI 446
            F +M+ RG++PD  T  ++LS+C+  G+++ G Q +  S++    +    D+YV   L+
Sbjct: 612 AFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQ-YFHSMREMHDVEPQSDHYVC--LV 668

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
            I  +  R E A  +   +P E D   + +++A  S++
Sbjct: 669 DILGRAGRLEEAMNIIETMPLEPDASIYKTLLAACSIH 706



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 13/300 (4%)

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   E A + F  +P  D+V W  +++    N    EA   F  M  +  YP  F+F++
Sbjct: 66  KCFSVEHARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSS 125

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           +L SC  L     G+++HA   K G+ ++  +GS+LI++Y +      A + F  M   +
Sbjct: 126 ILRSCFALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGD 185

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           TV+W  +I    Q G    A+R+Y +M+ + V  ++ TFV +L A S  GL   G ++ +
Sbjct: 186 TVSWTTVIASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIGL-QYG-KLIH 243

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           +  +  GV+  L   T +++   R     +A + + ++  + D ++W  ++S   L  N+
Sbjct: 244 AHAIVLGVKLNLVLKTALVNMYSRCQRIEDA-IKVSKLTPEYDVILWTAIISG--LAQNM 300

Query: 691 RLAKRAAE----ELFRLDPKNSAPYSLLANIYS----SLGRWDDLRAVRELMSENCIVKD 742
           +  +  A     E+  +   N    S+L+   S     LGR    R +R  + ++  V +
Sbjct: 301 KFQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGN 360



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 3/176 (1%)

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           + V+S C  L S  +G  +H+ I K G  + +++ + L+ +Y KC  +  ARQFFD M  
Sbjct: 24  SKVVSLC-NLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPC 82

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           ++ V+W  ++  + +N   +EA+ ++  M+ SG  P+  TF +IL +C   G    G  I
Sbjct: 83  RDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRI 142

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
             S  + HG E      + +ID   R     +A  L   M    D V W  +++SC
Sbjct: 143 HAS-SIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMD-SGDTVSWTTVIASC 196



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 4/110 (3%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK LH + L++GL     + N LI+LY K    H A+  F ++   D+ SWN ++S   
Sbjct: 542 TGKQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLA 601

Query: 66  KSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
            +  +  A   FD+M  R +    +++  ++S     GL +  L  ++ M
Sbjct: 602 SNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSM 651


>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
 gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
          Length = 766

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 192/635 (30%), Positives = 330/635 (51%), Gaps = 56/635 (8%)

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           L  N  ++N L+++Y +CG    A  VF+ M + N V++ A+++  A+  R  +A+ +F 
Sbjct: 78  LAHNTILSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFS 137

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
            M+R     D  +L S +  C+  G  G+                 G+QVH   IK    
Sbjct: 138 SMLRSGTMPDQFALGSAICACSELGDLGL-----------------GRQVHAQAIKWESG 180

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           +DL + N+L+ MY+K+G +     +F  + ++ ++SW  +IAG  Q+ +   A+++ + M
Sbjct: 181 SDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREM 240

Query: 330 KSCGFE-PDEVTSINMLVAC------------------------------------VRSG 352
            + G   P+E    ++  AC                                     R  
Sbjct: 241 IAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCN 300

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           ++ + R++F  + SP + SWN++++++S      EA+ LF EM+  G++PD  T+  +L 
Sbjct: 301 ELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLC 360

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +C     L  G+ +H+  +K     D  V++ L+ +Y++C     A  VFH   + D+V 
Sbjct: 361 ACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVT 420

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           WNS++     +    + F  F  + ++     + S   VLS+ A+L      +QVHA   
Sbjct: 421 WNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAF 480

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAV 591
           K G V D  + + LI+ Y KCG +  A + F++M  G++  +W+ +I GYAQ GY  EA+
Sbjct: 481 KVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEAL 540

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
            L+  M   GVKP+ +TFV +LTACS  GLVD G   ++ M+ ++G+ P  +H +C++D 
Sbjct: 541 DLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDL 600

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           L RAG   EA   +D+MP + D ++W+ LL++ R H +V + KRAAE +  +DP +SA Y
Sbjct: 601 LARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAY 660

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LL NIY+S G W++   +++ M  + + K P  S
Sbjct: 661 VLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKS 695



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 166/675 (24%), Positives = 296/675 (43%), Gaps = 124/675 (18%)

Query: 7   GKLLHAHILRNGLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           G+L+H H+L +   D     +T L N LI +Y +C    SA+                  
Sbjct: 61  GRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSAR------------------ 102

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                         +FD M +RN VSW  +I+A  +N     A+ +++ M   G +P   
Sbjct: 103 -------------VVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQF 149

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            L S   A + L D+  GR+ H   IK     ++ V NAL+++Y+K G       +FE +
Sbjct: 150 ALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERI 209

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS-IDSVSLSSVLGVCAREGCGVES 240
            + + +++ ++++GLA+  R ++AL++FR MI + V   +     SV   C+     +E 
Sbjct: 210 RDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLE- 268

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                         +G+Q+H +++K   + + +   SL DMYA+  ++DSA  +F  +  
Sbjct: 269 --------------YGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIES 314

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------- 349
             +VSWN +I  +  K   ++A+ L   M+  G  PD +T + +L ACV           
Sbjct: 315 PDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSI 374

Query: 350 ------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   R  D  +  ++F       V +WN++L++  Q ++ 
Sbjct: 375 HSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHL 434

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++  KLF  +       DR +L  +LS+ A +G  E  KQVHA + K     D  +++GL
Sbjct: 435 EDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGL 494

Query: 446 IGIYSKCQRNELAERVFHRIPE-LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           I  Y+KC   + A ++F  +    D+  W+S+I G +      EA   F +MR   + P 
Sbjct: 495 IDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPN 554

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF 563
             +F  VL++C+++    +G   ++ ++ + G V      S ++++  + G +  A +F 
Sbjct: 555 HVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFV 614

Query: 564 DMM-HGKNTVTWNEMIHG----------------------------------YAQNGYGD 588
           D M    + + W  ++                                    YA +G  +
Sbjct: 615 DQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWN 674

Query: 589 EAVRLYKDMIASGVK 603
           E  RL KDM +SGV+
Sbjct: 675 EFARLKKDMRSSGVQ 689



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 112/211 (53%), Gaps = 8/211 (3%)

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASG------LIGIYSKCQRNELAERVFHRIPE 467
           C+ +  L  G+ VH   L +++  D ++A        LI +Y +C   + A  VF  + +
Sbjct: 52  CSRLRSLPQGRLVHRHLLASSAR-DRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLD 110

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            + V W ++IA  + NS   +A   F  M ++   P QF+  + + +C++L     GRQV
Sbjct: 111 RNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQV 170

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           HAQ  K    +D+ V +AL+ MY K G +      F+ +  K+ ++W  +I G AQ G  
Sbjct: 171 HAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGRE 230

Query: 588 DEAVRLYKDMIASGV-KPDDITFVAILTACS 617
            +A++++++MIA GV  P++  F ++  ACS
Sbjct: 231 MDALQIFREMIAEGVHHPNEFHFGSVFRACS 261



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)

Query: 515 CAKLSSSFQGRQVH----AQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           C++L S  QGR VH    A   +D ++ ++  + + LI MY +CG    AR  FD M  +
Sbjct: 52  CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           N V+W  +I  +AQN    +A+ L+  M+ SG  PD     + + ACS  G + +G ++
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQV 170


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 196/620 (31%), Positives = 323/620 (52%), Gaps = 65/620 (10%)

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSL---------SSVL 228
           F+ ++ PN++  T  + G  ++  +  AL+MF  M      I +V +            +
Sbjct: 50  FKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAI 109

Query: 229 GVCAREGC-GVESDVFA-----QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
               R  C G+ SD F      ++  +    + GQ+VH   IK+GF+ D+++ N L+DMY
Sbjct: 110 DFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMY 169

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
            K G ++ AE +F  +P R +VSWN M++GY        ++   + M   G + D    I
Sbjct: 170 LKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMI 229

Query: 343 NMLVAC----------------VRS-------------------GDIKTGREMFDSMPSP 367
           + L AC                +RS                   G +     +F+ + S 
Sbjct: 230 SALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSK 289

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           ++ +WNAM+    + +                V PD  T+  +L SC+  G L  GK +H
Sbjct: 290 NIVAWNAMIGGMQEDDK---------------VIPDVITMINLLPSCSQSGALLEGKSIH 334

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
             +++        + + L+ +Y KC   +LAE VF+++ E ++V WN+M+A    N    
Sbjct: 335 GFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYK 394

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           EA   F+ +    + P   + A+VL + A+L+S  +G+Q+H+ I K G  ++ F+ +A++
Sbjct: 395 EALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIV 454

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
            MY KCGD+  AR+FFD M  K+ V+WN MI  YA +G+G  +++ + +M   G KP+  
Sbjct: 455 YMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGS 514

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           TFV++LTACS SGL+D G   FNSM++++G++P ++HY CM+D LGR G+  EA+  I+E
Sbjct: 515 TFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEE 574

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
           MP      IW  LL++ R H +V LA+ AA  +  L   N+  Y LL+N+Y+  GRW+D+
Sbjct: 575 MPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDV 634

Query: 728 RAVRELMSENCIVKDPAYSL 747
             ++ LM E  +VK    S+
Sbjct: 635 DRIKYLMKEQGLVKTVGCSM 654



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 234/464 (50%), Gaps = 36/464 (7%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A  +F++M   +   WN +I     NGL ++A+  Y +M  EG    + T   V KA   
Sbjct: 77  ALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGE 136

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           LL +  G++ HG +IKIG D ++YV N L+ +Y K G+ + A  VF+EM   + V++ +M
Sbjct: 137 LLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSM 196

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           +SG       + +L  F+ M+R     D   + S LG C+ E C + S            
Sbjct: 197 VSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHC-LRS------------ 243

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G ++HC  I+   E D+ +  SL+DMY K G +D AE +F+ +  +++V+WN MI G
Sbjct: 244 ---GMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG 300

Query: 313 YGQKYQSTK-AIELLQRMKSCG-------------------FEPDEVTSINMLVACVRSG 352
             +  +     I ++  + SC                    F P  V    ++    + G
Sbjct: 301 MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCG 360

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           ++K    +F+ M   ++ SWN M+++Y Q+E +KEA+K+F+ +    +KPD  T+A +L 
Sbjct: 361 ELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLP 420

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           + A +     GKQ+H+  +K     + ++++ ++ +Y+KC   + A   F  +   D+V 
Sbjct: 421 AVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVS 480

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
           WN+MI   +++     +  FF +MR     P   +F ++L++C+
Sbjct: 481 WNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACS 524



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 206/456 (45%), Gaps = 97/456 (21%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + G+ +H  +++ G   D ++CN LI++Y K                           
Sbjct: 139 ALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGF------------------------ 174

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                  +E A K+FDEMP R++VSWN+++S    +G    +L  + +M   G       
Sbjct: 175 -------IELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFG 227

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + S   A +    +  G   H  VI+  L+ +I V  +L+ +Y KCG   +A  VF  + 
Sbjct: 228 MISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIY 287

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             N V + AM+ G+ + D+V+                D +++ ++L  C++ G  +E   
Sbjct: 288 SKNIVAWNAMIGGMQEDDKVIP---------------DVITMINLLPSCSQSGALLE--- 329

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+ +H   I+  F   L L  +L+DMY K G++  AE +F+ + E++
Sbjct: 330 -------------GKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKN 376

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------- 348
           +VSWN M+A Y Q  Q  +A+++ Q + +   +PD +T  ++L A               
Sbjct: 377 MVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHS 436

Query: 349 ---------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                 + GD++T RE FD M    V SWN M+ +Y+     + 
Sbjct: 437 YIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRT 496

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +I+ F EM+ +G KP+ +T   +L++C+  G+++ G
Sbjct: 497 SIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEG 532



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 46/297 (15%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + GK +H   +R        L   L+++Y KC     A+H+F+               
Sbjct: 326 ALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFN--------------- 370

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                           +M E+N+VSWN +++A V+N   ++AL ++  + NE   P  IT
Sbjct: 371 ----------------QMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAIT 414

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           +ASV  A   L     G++ H  ++K+GL  N +++NA++ +YAKCG  + A   F+ M 
Sbjct: 415 IASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMV 474

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + V++  M+   A       +++ F  M  K    +  +  S+L  C+  G   E   
Sbjct: 475 CKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWG 534

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           F  S               + ++ G +  +     +LD+  +NG++D A+     +P
Sbjct: 535 FFNS---------------MKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMP 576


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 224/725 (30%), Positives = 371/725 (51%), Gaps = 61/725 (8%)

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFVPT 119
           L  Q   +D   A + FDE+P RN +  ++ +    R G   +AL  +  +    G    
Sbjct: 45  LENQTNLNDATGARQAFDEIPHRNTL--DHALFDHARRGSVHQALDHFLDVHRCHGGRVG 102

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDK-NIYVANALLSLYAKCGWTKHAVPVF 178
              L  V K   ++ D   G++ HGL I+ G D+ ++ V  +L+ +Y K         VF
Sbjct: 103 GGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVF 162

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           E M + N VT+T++++G  +   + + +E+F  M  + V  +SV+ +SVL V A +G   
Sbjct: 163 EAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQG--- 219

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
             D+             G++VH  ++K G  + + + NSL++MYAK G ++ A V+F  +
Sbjct: 220 MVDL-------------GRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGM 266

Query: 299 PERSVVSWNVMIAGY--------------------GQKYQSTKA--IELLQRMKSCGFEP 336
             R +VSWN ++AG                         QST A  I+L   +K  G   
Sbjct: 267 ETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLAR 326

Query: 337 DEVTSI---------NMLVACV----RSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQS 382
              +S+         N++ A +    ++G +    ++F  M  S +V SW AM++   Q+
Sbjct: 327 QLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQN 386

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
            +   A  LF  M+  GV P+  T + IL++  A        Q+HA  +KT     + V 
Sbjct: 387 GDVPLAAALFSRMREDGVAPNDFTYSTILTASVA----SLPPQIHAQVIKTNYECTSIVG 442

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + L+  YSK    E A  +F  I + D+V W++M+   +       A   F +M  + + 
Sbjct: 443 TALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLK 502

Query: 503 PTQFSFATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
           P +F+ ++V+ +CA  ++    GRQ HA   K    + + V SAL+ MY + G I  A+ 
Sbjct: 503 PNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQC 562

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F+    ++ V+WN M+ GYAQ+GY  +A+ +++ M A G++ D +TF++++  C+H+GL
Sbjct: 563 IFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGL 622

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           V+ G   F+SM  D+G+ P ++HY CM+D   RAG   EA  LI+ M     P++W  LL
Sbjct: 623 VEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLL 682

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
            +C++H NV L K AAE+L  L+P +SA Y LL+NIYS+ G+W +   VR+LM    + K
Sbjct: 683 GACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKK 742

Query: 742 DPAYS 746
           +   S
Sbjct: 743 EAGCS 747



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 196/456 (42%), Gaps = 88/456 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA  ++ G     F+CN L+ +Y+KC                              
Sbjct: 224 GRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGL---------------------------- 255

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A  +F  M  R++VSWN L++ LV NG + +AL +++   +   + T  T A+V
Sbjct: 256 ---VEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATV 312

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EPN 185
            K    +  +   R+ H  V+K G      V  AL+  Y+K G   +A+ +F  MS   N
Sbjct: 313 IKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQN 372

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++TAM++G  +   V  A  +F  M    V+ +  + S++L                 
Sbjct: 373 VVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA--------------- 417

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                S      Q+H   IK  +E    +  +LL  Y+K  + + A  IF  + ++ VVS
Sbjct: 418 -----SVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVS 472

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           W+ M+  Y Q   S  A  +  +M   G +P+E T  +++ AC                 
Sbjct: 473 WSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAIS 532

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               R G I++ + +F+      + SWN+MLS Y+Q    ++A+
Sbjct: 533 IKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKAL 592

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
            +FR+M+  G++ D  T   ++  CA  G++E G++
Sbjct: 593 DVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQR 628



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 135/305 (44%), Gaps = 50/305 (16%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA +++      + +   L+  YSK  NT  A  +F  +  KD+ SW+A+L+   ++ D
Sbjct: 426 IHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGD 485

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                                           + A +++ KM+  G  P   T++SV  A
Sbjct: 486 -------------------------------SDGATNIFIKMTMHGLKPNEFTISSVIDA 514

Query: 130 -STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
            ++    V+ GR+ H + IK      + V++AL+S+YA+ G  + A  +FE  ++ + V+
Sbjct: 515 CASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVS 574

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           + +M+SG A+     +AL++FR M  + + +D V+  SV+  CA  G   E   +  S  
Sbjct: 575 WNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDS-- 632

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL--PERSVVSW 306
                        +    G    +     ++D+Y++ G +D A  +   +  P   +V W
Sbjct: 633 -------------MARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMV-W 678

Query: 307 NVMIA 311
             ++ 
Sbjct: 679 RTLLG 683



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 4/164 (2%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +A++S   +   +E A  +F+   +R++VSWN+++S   ++G  +KAL V+ +M  EG  
Sbjct: 545 SALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIE 604

Query: 118 PTHITLASVFKASTALLDVEHGRR-CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
              +T  SV         VE G+R    +    G+   +     ++ LY++ G    A+ 
Sbjct: 605 MDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMS 664

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           + E MS P        + G  K  + V   E+ +L   K +S++
Sbjct: 665 LIEGMSFPAGPMVWRTLLGACKVHKNV---ELGKLAAEKLLSLE 705


>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 217/747 (29%), Positives = 358/747 (47%), Gaps = 70/747 (9%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           HA I+ +G  ++ F+ ++LI LY+           F K                C ++  
Sbjct: 55  HAFIITSGYSNNIFIASKLISLYAS----------FHK--------------PSCSTE-- 88

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
                LFDE+P R+   WN++I A   NG   +AL  Y  M     +P H T+  +  + 
Sbjct: 89  -----LFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASC 143

Query: 131 TALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
             L  V +GR  HGLV K+GL   +  V ++ + +Y+KCG  + A  VF+E+   + V +
Sbjct: 144 AELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVAW 203

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           TA++ G  +       LE    M R     +  +  ++ G    + CG            
Sbjct: 204 TALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEG--GFQACG-----------N 250

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
               + G+ +H L +K G +    + + LL MY+K G+ + A   F  +  + ++SW  M
Sbjct: 251 LGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSM 310

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVT----------SINMLVACVRSGDIKTGRE 359
           I+ Y +   +T+ I++   M   G  PD +           S+ +  A    G I     
Sbjct: 311 ISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHY 370

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
             D M        NA+LS Y +    K A K F  +  +  +     ++         G 
Sbjct: 371 TLDQMVQ------NALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVS-------GYGA 417

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
               + +H   +K     +  V + LI +Y K     +A R+F RIP  DIV WN++I+ 
Sbjct: 418 THLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPR-DIVTWNTLISS 476

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
            +      EA   + +M   ++ P   +  +VLS+C+ L+S  +G +VH  I    +  +
Sbjct: 477 YAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFN 536

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           + + +ALI+MY KCG +  +R+ F+ MH ++ +TWN MI GY  +G    A+  ++ M  
Sbjct: 537 LSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEE 596

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
           S  KP+ +TF+A+L+AC+H+GLV  G  +F  MQ D+ V P L HY CM+D LGR+G+  
Sbjct: 597 SSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQ-DYSVAPNLKHYACMVDLLGRSGNLQ 655

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           EAE L+  MP   D  +W  LLSSC++H  + +  R A+     D +N   Y +++N+YS
Sbjct: 656 EAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMISNMYS 715

Query: 720 SLGRWDDLRAVRELMSENCIVKDPAYS 746
           S+G+W++    R +M E  + K   +S
Sbjct: 716 SIGKWEEAEKARGIMKERGVRKKTGWS 742



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 186/454 (40%), Gaps = 48/454 (10%)

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           Q H   I  G+  ++ +++ L+ +YA       +  +F  +P R    WN +I  +    
Sbjct: 53  QSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNG 112

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----------------- 360
           + ++A++  Q M++    P+  T   ++ +C     +  GR +                 
Sbjct: 113 EYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVG 172

Query: 361 -------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ---FR 398
                              FD +    V +W A++    Q+   K  ++   EM      
Sbjct: 173 SSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGD 232

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G +P+  TL     +C  +G L  G+ +H   +KT       V S L+ +YSKC   E A
Sbjct: 233 GERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEA 292

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            R F  +   DI+ W SMI+  S      E    F +M  + +YP     + +LSS +  
Sbjct: 293 HRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNS 352

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
              F+ +  H  I +  Y  D  V +AL+ MYCK G +  A +FF  ++ +N   WN M+
Sbjct: 353 MRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMV 412

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GY   G    A  ++  MI + +  +     +++     SG + +   IF  +  D   
Sbjct: 413 SGY---GATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPRD--- 466

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
              +  +  +I      GHF EA  L D+M  +D
Sbjct: 467 ---IVTWNTLISSYAHCGHFAEALSLYDKMVLED 497


>gi|297742233|emb|CBI34382.3| unnamed protein product [Vitis vinifera]
          Length = 705

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 200/625 (32%), Positives = 335/625 (53%), Gaps = 28/625 (4%)

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           +T   V  +  A  D+  G   H  ++K GL  N++VAN+L+ +YAKCG  + A  +F+ 
Sbjct: 43  LTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLFDH 102

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M +   V++T+MMSG  +     E + +F  M+ + +  +  +L+ +L  CA+       
Sbjct: 103 MPDKTVVSWTSMMSGHCQRGAFDEVISIFWRML-ETLQPNEYTLAVILQACAQ------- 154

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
               + D K       Q +HC  IK GF  D  L NSL+D Y K+G + +AE +   L  
Sbjct: 155 ----KRDLKLV-----QLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLIC 205

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           R VVSW  +I+G        KA+     M+  G  P+ VT +++L AC    + +  + +
Sbjct: 206 RDVVSWTSVISGCVLNGMVEKALLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWV 265

Query: 361 ----FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP--DRTTLAIILSSC 414
                 +    +V   N+++  YS +   KE  ++F    F G        T+A +L  C
Sbjct: 266 HGLVMKAEWRENVFVMNSLVEMYSINGYFKEGFQIFCNFCFEGDGQYLSTETIATLLQGC 325

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           +    L+ G+Q+H   +K        V + LI +Y++ +R++ A ++F ++   DIV WN
Sbjct: 326 SHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWN 385

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNE----MYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           +MI+ L   S   +A M   ++  N     +YP   +    + +C+ L+S   G+ +H  
Sbjct: 386 TMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGY 445

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           I + G + DIFV ++L++MY KCG ++ A +  + M  ++  +WN +I  Y  NG G  A
Sbjct: 446 ITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISA 505

Query: 591 VRLYKDMIASGV-KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           + ++K +  +G  +P+ ITF  IL+AC+H+GLV  G EIF SM+ ++ +EP ++H+ CM+
Sbjct: 506 LNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFEIFKSMKREYSLEPRIEHFACMV 565

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
           D LGRAG   EAE  I +MP +  P +W  LL  C L  N+ +A+R A++L+ L+PK+ A
Sbjct: 566 DLLGRAGRLEEAEAFIQKMPFEPGPEVWGALLGGCGLFGNLDIAERVAKKLYILEPKSRA 625

Query: 710 PYSLLANIYSSLGRWDDLRAVRELM 734
               L+N+Y+S+ +W+D   VR  M
Sbjct: 626 WRVALSNVYASVNKWEDAAKVRAEM 650



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 152/617 (24%), Positives = 272/617 (44%), Gaps = 87/617 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H +IL++GL  + F+ N L+++Y+KC                              
Sbjct: 61  GSCIHTNILKSGLHTNVFVANSLMDMYAKCGR---------------------------- 92

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A KLFD MP++ VVSW +++S   + G  ++ +S++ +M  E   P   TLA +
Sbjct: 93  ---IEDAAKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRML-ETLQPNEYTLAVI 148

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A     D++  +  H  +IK G   + ++ N+L+  Y K G    A  + + +   + 
Sbjct: 149 LQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDV 208

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T+++SG      V +AL  F  M    VS ++V++ S+L  C+      E  VF   
Sbjct: 209 VSWTSVISGCVLNGMVEKALLFFFEMQEDGVSPNTVTILSILQACSLIN---EWQVF--- 262

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                     Q VH L +K  +  ++ + NSL++MY+ NG       IF N         
Sbjct: 263 ----------QWVHGLVMKAEWRENVFVMNSLVEMYSINGYFKEGFQIFCNF-------- 304

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSC-------------------GFEPDEVTSINMLVA 347
                G GQ Y ST+ I  L  ++ C                   GF P  +   +++  
Sbjct: 305 --CFEGDGQ-YLSTETIATL--LQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYM 359

Query: 348 CVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG----VKPD 403
              +       ++F  M    + SWN M+SS  +  +  +A+ L  E+   G    + PD
Sbjct: 360 YAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPD 419

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             T+   + +C+++  L+ G+ +H    +     D +V + L+ +Y KC R  LAE+V  
Sbjct: 420 FVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSE 479

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY-PTQFSFATVLSSCAKLSSSF 522
            +P  D+  WNS+IA   +N   I A   FKQ++    + P   +F  +LS+CA      
Sbjct: 480 EMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVA 539

Query: 523 QGRQVHAQIEKDGYVND-IFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHG 580
           +G ++   ++++  +   I   + ++++  + G +  A  F   M        W  ++ G
Sbjct: 540 EGFEIFKSMKREYSLEPRIEHFACMVDLLGRAGRLEEAEAFIQKMPFEPGPEVWGALLGG 599

Query: 581 YAQNGYGDEAVRLYKDM 597
               G  D A R+ K +
Sbjct: 600 CGLFGNLDIAERVAKKL 616



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 116/215 (53%), Gaps = 1/215 (0%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  T   +LSSCAA   L  G  +H   LK+  H + +VA+ L+ +Y+KC R E A ++F
Sbjct: 41  DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLF 100

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             +P+  +V W SM++G        E    F +M +  + P +++ A +L +CA+     
Sbjct: 101 DHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLET-LQPNEYTLAVILQACAQKRDLK 159

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
             + +H  I K G+V D F+ ++LI+ Y K G +  A +    +  ++ V+W  +I G  
Sbjct: 160 LVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCV 219

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            NG  ++A+  + +M   GV P+ +T ++IL ACS
Sbjct: 220 LNGMVEKALLFFFEMQEDGVSPNTVTILSILQACS 254


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 180/492 (36%), Positives = 275/492 (55%), Gaps = 36/492 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G++VH  T    F   + +SN L+ MYAK G +  A+++F  +P++ + SWN MI+GY  
Sbjct: 82  GKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYAN 141

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                               G I+  R++FD MP     SWNA+
Sbjct: 142 -----------------------------------VGRIEQARKLFDEMPHRDNFSWNAV 166

Query: 376 LSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           +S Y     + EA+ LFR MQ       +  TL+  L++ AA+  L  GK++H   +++ 
Sbjct: 167 ISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSG 226

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             +D  V + L+ +Y KC     A  +F ++ + DIV W +MI     +    E F  F+
Sbjct: 227 LELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFR 286

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
            +  + + P +++FA VL++CA L++   G++VH  + + GY    F  SAL+ +Y KCG
Sbjct: 287 DLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCG 346

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
           +   AR+ F+ M   + V+W  +I GYAQNG  D A++ ++ ++ SG KPD+ITFV +L+
Sbjct: 347 NTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLS 406

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           AC+H+GLVD+G+E F+S++  HG+    DHY C+ID L R+G F EAE +ID MP K D 
Sbjct: 407 ACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDK 466

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
            +W  LL  CR+H N+ LA+RAA+ LF L+P+N A Y  L+NIY++ G W +   VR  M
Sbjct: 467 FLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDM 526

Query: 735 SENCIVKDPAYS 746
               IVK P  S
Sbjct: 527 DNRGIVKKPGKS 538



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 218/429 (50%), Gaps = 25/429 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HAH   +       + NRLI +Y+KC +   AQ LFD++P KD+ SWN ++S    
Sbjct: 82  GKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYAN 141

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITLAS 125
              +E A KLFDEMP R+  SWN +IS  V  G   +AL ++  M  NE       TL+S
Sbjct: 142 VGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSS 201

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A+ A+  +  G+  HG +I+ GL+ +  V  ALL LY KCG    A  +F++M++ +
Sbjct: 202 ALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKD 261

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T M+    +  R  E   +FR ++   V  +  + + VL  CA        D+ A+
Sbjct: 262 IVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACA--------DLAAE 313

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G++VH    ++G++     +++L+ +Y+K G+ ++A  +F+ +P   +VS
Sbjct: 314 Q--------MGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVS 365

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  +I GY Q  Q   A++  + +   G +PDE+T + +L AC  +G +  G E F S+ 
Sbjct: 366 WTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVK 425

Query: 366 SP-----SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                  +   +  ++   ++S   KEA  +   M    +KPD+   A +L  C   G +
Sbjct: 426 EKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMP---MKPDKFLWASLLGGCRIHGNI 482

Query: 421 ESGKQVHAA 429
           E  ++   A
Sbjct: 483 ELAERAAKA 491



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 185/424 (43%), Gaps = 63/424 (14%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P+    +++  A      +E G+R H           I ++N L+ +YAKCG    A  +
Sbjct: 61  PSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQML 120

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+E+ + +  ++  M+SG A   R+ +A ++F  M  +    D+ S ++V+     +G  
Sbjct: 121 FDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQGWY 176

Query: 238 VES-DVFAQSDNKFSRNVH-------------------GQQVHCLTIKLGFEADLHLSNS 277
           +E+ D+F       S N +                   G+++H   I+ G E D  +  +
Sbjct: 177 MEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTA 236

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           LLD+Y K G ++ A  IF  + ++ +VSW  MI    +  +  +   L + +   G  P+
Sbjct: 237 LLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPN 296

Query: 338 EVTSINMLVACV-----------------------------------RSGDIKTGREMFD 362
           E T   +L AC                                    + G+ +T R +F+
Sbjct: 297 EYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFN 356

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            MP P + SW +++  Y+Q+     A++ F  +   G KPD  T   +LS+C   G+++ 
Sbjct: 357 QMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDI 416

Query: 423 G-KQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           G +  H+   K    H  ++ A  +I + ++  R + AE +   +P + D   W S++ G
Sbjct: 417 GLEYFHSVKEKHGLVHTADHYAC-VIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGG 475

Query: 480 LSLN 483
             ++
Sbjct: 476 CRIH 479



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 178/376 (47%), Gaps = 45/376 (11%)

Query: 373 NAMLSSYSQSENHKEAIKLFREMQ---------FRGVKPDRTTLAIILSSCAAMGILESG 423
           +  LS +S+    +E I+LF +            R  +P     + ++++C     LE G
Sbjct: 23  DTTLSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELG 82

Query: 424 KQVHAASLKTASHIDNYVASG-LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG--- 479
           K+VHA + K ++ I   V S  LI +Y+KC     A+ +F  IP+ D+  WN+MI+G   
Sbjct: 83  KRVHAHT-KASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYAN 141

Query: 480 -------------------LSLNSL---------DIEAFMFFKQMRQNEMYP-TQFSFAT 510
                               S N++          +EA   F+ M++NE      F+ ++
Sbjct: 142 VGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSS 201

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
            L++ A +SS  +G+++H  + + G   D  V +AL+++Y KCG +  AR  FD M  K+
Sbjct: 202 ALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKD 261

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+W  MIH   ++G   E   L++D++ SGV+P++ TF  +L AC+      +G E+  
Sbjct: 262 IVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHG 321

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
            M    G +P     + ++    + G+   A  + ++MP + D V W  L+     +   
Sbjct: 322 YMT-RVGYDPFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLIVGYAQNGQP 379

Query: 691 RLAKRAAEELFRLDPK 706
            +A +  E L R   K
Sbjct: 380 DMALQFFESLLRSGTK 395



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 33/195 (16%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A   GK +H ++ R G    +F  + L+ +YSKC NT +A+ +F++MP  D+ SW +   
Sbjct: 312 AEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTS--- 368

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
                                       LI    +NG  + AL  +  +   G  P  IT
Sbjct: 369 ----------------------------LIVGYAQNGQPDMALQFFESLLRSGTKPDEIT 400

Query: 123 LASVFKASTALLDVEHG-RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
              V  A T    V+ G    H +  K GL         ++ L A+ G  K A  + + M
Sbjct: 401 FVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNM 460

Query: 182 S-EPNEVTFTAMMSG 195
             +P++  + +++ G
Sbjct: 461 PMKPDKFLWASLLGG 475


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 192/652 (29%), Positives = 337/652 (51%), Gaps = 59/652 (9%)

Query: 135 DVEHGRRCHGLVIKIG----LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
           D   GR  HG V++ G    LD  ++ AN LL++Y K G    A  +F+ M E N V+F 
Sbjct: 74  DARGGRAVHGHVVRRGGVGRLD--LFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFV 131

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC-AREGCGVESDVFAQSDNK 249
            ++   A+      A  +FR +  +   ++   L+++L +  A +  G+   V       
Sbjct: 132 TLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGV------- 184

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                     H    KLG + +  + + L+D Y+    +  AE +F+ +  +  V W  M
Sbjct: 185 ----------HSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------------- 349
           ++ Y +      A  +  +M+  G +P+     ++L A V                    
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294

Query: 350 ---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + GDIK  R  F+ +P   V   + M+S Y+QS  +++A +LF  
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +    V P+  +L+ +L +C  M  L+ GKQ+H  ++K     D +V + L+  Y+KC  
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + + ++F  + + + V WN+++ G S + L  EA   F +M+  +M  TQ ++++VL +
Sbjct: 415 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRA 474

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           CA  +S     Q+H  IEK  + ND  +G++LI+ Y KCG I  A + F  +  ++ ++W
Sbjct: 475 CASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISW 534

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I GYA +G   +A+ L+  M  S V+ +DITFVA+L+ CS +GLV+ G+ +F+SM++
Sbjct: 535 NAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRI 594

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           DHG++P ++HYTC++  LGRAG  ++A   I ++P     ++W  LLSSC +H NV L +
Sbjct: 595 DHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 654

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +AE++  ++P++   Y LL+N+Y++ G  D +  +R+ M    + K P  S
Sbjct: 655 FSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLS 706



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/614 (24%), Positives = 258/614 (42%), Gaps = 90/614 (14%)

Query: 6   AGKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            G+ +H H++R G     D F  N L+ +Y K     SA+ LFD+MP +++ S+  ++ A
Sbjct: 77  GGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQA 136

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             +  D E A  LF  +       W                         EG       L
Sbjct: 137 HAQRGDFEAAAALFRRL------RW-------------------------EGHEVNQFVL 165

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            ++ K + A+         H    K+G D N +V + L+  Y+ C     A  VF  +  
Sbjct: 166 TTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVR 225

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL--GVCAREGCGVESD 241
            + V +TAM+S  ++ D    A  +F  M       +  +L+SVL   VC          
Sbjct: 226 KDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVC---------- 275

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                       V G+ +H   IK   + + H+  +LLDMYAK GD+  A + F  +P  
Sbjct: 276 --------LPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYD 327

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VR 350
            V+  + MI+ Y Q  Q+ +A EL  R+      P+E +  ++L AC           + 
Sbjct: 328 DVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIH 387

Query: 351 SGDIKTGRE------------------------MFDSMPSPSVSSWNAMLSSYSQSENHK 386
           +  IK G E                        +F S+   +  SWN ++  +SQS   +
Sbjct: 388 NHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGE 447

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA+ +F EMQ   +   + T + +L +CA+   +    Q+H +  K+  + D  + + LI
Sbjct: 448 EALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLI 507

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
             Y+KC     A +VF  + E DI+ WN++I+G +L+    +A   F +M ++ +     
Sbjct: 508 DTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDI 567

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF-D 564
           +F  +LS C+       G  +   +  D G    +   + ++ +  + G +  A QF  D
Sbjct: 568 TFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGD 627

Query: 565 MMHGKNTVTWNEMI 578
           +    + + W  ++
Sbjct: 628 IPSAPSAMVWRALL 641



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 216/461 (46%), Gaps = 49/461 (10%)

Query: 45  LFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKA 104
           L D  PH       A+L    K  D++ A   F+ +P  +V+  + +IS   ++   E+A
Sbjct: 293 LNDTEPHVG----GALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQA 348

Query: 105 LSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL 164
             ++ ++     +P   +L+SV +A T ++ ++ G++ H   IKIG + +++V NAL+  
Sbjct: 349 FELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDF 408

Query: 165 YAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSL 224
           YAKC     ++ +F  + + NEV++  ++ G +++    EAL +F  M    +    V+ 
Sbjct: 409 YAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTY 468

Query: 225 SSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK 284
           SSVL  CA                  +   H  Q+HC   K  F  D  + NSL+D YAK
Sbjct: 469 SSVLRACAST----------------ASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAK 512

Query: 285 NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
            G +  A  +F +L ER ++SWN +I+GY    Q+  A+EL  RM     E +++T + +
Sbjct: 513 CGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVAL 572

Query: 345 LVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           L  C  +G +  G  +FDSM       PS+  +  ++    ++    +A      +QF G
Sbjct: 573 LSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDA------LQFIG 626

Query: 400 VKPDRTTLAI---ILSSC-----AAMGILESGKQVHAASLKTASHI---DNYVASG---L 445
             P   +  +   +LSSC      A+G   + K +        +++   + Y A+G    
Sbjct: 627 DIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQ 686

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           + +  K  RN +  R   ++P L  V     I   S+ S+D
Sbjct: 687 VALLRKSMRN-IGVR---KVPGLSWVEIKGEIHAFSVGSVD 723



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN--DIFVGSALIEMYCKCGDIYGARQFF 563
           F+ A  L  C     +  GR VH  + + G V   D+F  + L+ MY K G +  AR+ F
Sbjct: 60  FACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLF 119

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           D M  +N V++  ++  +AQ G  + A  L++ +   G + +      +L
Sbjct: 120 DRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTML 169


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 187/524 (35%), Positives = 289/524 (55%), Gaps = 42/524 (8%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G   H   +KLG   D  + N++LDMYAKNG +D A  +F  + ER++  WN MI+G  +
Sbjct: 114 GNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWK 173

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
               T+A+ L   M +     + +T  +M+    + GD+++ R  FD MP  SV SWNAM
Sbjct: 174 SGNETEAVVLFNMMPA----RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAM 229

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG-------ILESGKQVHA 428
            S+Y+Q E  KEA+ LF +M   G+ PD TT  + +SSC+++G       IL    Q H 
Sbjct: 230 QSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI 289

Query: 429 -----------------ASLKTASHIDNYVASG--------LIGIYSKCQRNELAERVFH 463
                             +L+ A +I + + S         +I  Y++  +  LA  +F 
Sbjct: 290 VLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFD 349

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQFSFATVLSSCAKLSSSF 522
            +P+ D+V WNSMIAG + N     +   FK+M    ++ P + + A+VLS+C  + +  
Sbjct: 350 NMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALK 409

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
               V   + +      I   ++LI MY KCG +  A + F  M  ++ V++N +I G+A
Sbjct: 410 LSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFA 469

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
            NG+G EA++L   M   G++PD +T++ +LTACSH+GL++ G  +F S+Q      P +
Sbjct: 470 ANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTV 524

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           DHY CM+D LGRAG   EA+MLI  MP K    ++  LL++ R+H  V L + AA +LF 
Sbjct: 525 DHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFE 584

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L+P+N   Y LL+NIY+S GRW+D++ VRE+M +  + K    S
Sbjct: 585 LEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMS 628



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 217/469 (46%), Gaps = 94/469 (20%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKM----------- 49
           K A  +G + HA++L+ G  DD F+ N ++++Y+K      A++LF++M           
Sbjct: 108 KLAGKSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSM 167

Query: 50  --------------------PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWN 89
                               P ++I +W ++++   K  DLE A + FDEMPER+VVSWN
Sbjct: 168 ISGCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWN 227

Query: 90  NLISALVRNGLEEKALSVYNKMSNEGFVP------------------------------T 119
            + SA  +    ++AL+++++M  EG  P                               
Sbjct: 228 AMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQK 287

Query: 120 HITLASVFKASTALLDVEHGRR-----CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           HI L S  K  TALLD+ H +         +  ++G  +N    N ++S Y + G    A
Sbjct: 288 HIVLNSFVK--TALLDM-HAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLA 344

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAR 233
             +F+ M + + V++ +M++G A+      ++E+F+ MI    +  D V+++SVL  C  
Sbjct: 345 RELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGH 404

Query: 234 EGCGVES----DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            G    S    D+  + +                IKLG        NSL+ MY+K G + 
Sbjct: 405 IGALKLSYWVLDIVREKN----------------IKLGISG----FNSLIFMYSKCGSVA 444

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
            A  IF  +  R VVS+N +I+G+       +AI+L+  M+  G EPD VT I +L AC 
Sbjct: 445 DAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACS 504

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
            +G +  G+ +F S+ +P+V  +  M+    ++    EA  L + M  +
Sbjct: 505 HAGLLNEGKNVFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMK 553



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 125/577 (21%), Positives = 225/577 (38%), Gaps = 133/577 (23%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYS---WNAILSAQCKSDDLEFAY--KLFDEMPER 83
           L+ L SK +N    +     + H  ++S   W ++L   C       AY   +F   P  
Sbjct: 4   LVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSP 63

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           +   ++ ++    R G   + +S++    +    P       + K     L  + G   H
Sbjct: 64  DASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIK-----LAGKSGNMFH 118

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
             V+K+G   + ++ NA+L +YAK G    A  +FE+M+E     + +M+SG  K+    
Sbjct: 119 AYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNET 178

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           EA+ +F +M  + +    ++ +S++   A+ G                            
Sbjct: 179 EAVVLFNMMPARNI----ITWTSMVTGYAKMG---------------------------- 206

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
                                  D++SA   F  +PERSVVSWN M + Y QK    +A+
Sbjct: 207 -----------------------DLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEAL 243

Query: 324 ELLQRMKSCGFEPDEVTSINMLVAC----------------------------------- 348
            L  +M   G  PD+ T +  + +C                                   
Sbjct: 244 NLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMH 303

Query: 349 VRSGDIKTGREMFDSMPSP--------------------------------SVSSWNAML 376
            + G+++  R +FD + S                                  V SWN+M+
Sbjct: 304 AKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMI 363

Query: 377 SSYSQSENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           + Y+Q+     +I+LF+EM     ++PD  T+A +LS+C  +G L+    V     +   
Sbjct: 364 AGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNI 423

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
            +     + LI +YSKC     A R+F  +   D+V +N++I+G + N    EA      
Sbjct: 424 KLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLT 483

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           M +  + P   ++  VL++C+      +G+ V   I+
Sbjct: 484 MEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ 520



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 160/350 (45%), Gaps = 55/350 (15%)

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F S PSP  S ++ ML  YS+   H + + LF+      ++P +  + I L   A    
Sbjct: 56  IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRP-QPFVYIYLIKLAG--- 111

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
            +SG   HA  LK     D+++ + ++ +Y+K  + +LA  +F ++ E  +  WNSMI+G
Sbjct: 112 -KSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
              +  + EA + F  M      P +                                 +
Sbjct: 171 CWKSGNETEAVVLFNMM------PAR---------------------------------N 191

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           I   ++++  Y K GD+  AR++FD M  ++ V+WN M   YAQ     EA+ L+  M+ 
Sbjct: 192 IITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLE 251

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGH 657
            G+ PDD T+V  +++CS  G   +   I   +   H    +L+ +  T ++D   + G+
Sbjct: 252 EGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKH---IVLNSFVKTALLDMHAKFGN 308

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA-AEELFRLDPK 706
              A  + DE+  + + V W +++S     A  R+ K + A ELF   PK
Sbjct: 309 LEIARNIFDELGSQRNAVTWNIMIS-----AYTRVGKLSLARELFDNMPK 353


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 204/611 (33%), Positives = 328/611 (53%), Gaps = 45/611 (7%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV--TFTAMMSGLA 197
           RRC  L +++    +   A   ++ YA+ G   HA  VF+E   P+    ++ AM++   
Sbjct: 10  RRCMMLQVRLQCTTSSSYA---IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYF 66

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD-VFAQSDNKFSRNVHG 256
           +  +  EAL +F  M ++    ++VS + ++    + G   E+  VF   D    RNV  
Sbjct: 67  EARQPREALLLFEKMPQR----NTVSWNGLISGHIKNGMLSEARRVF---DTMPDRNVVS 119

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
                               S++  Y +NGD+  AE +F ++P ++VVSW VM+ G  Q+
Sbjct: 120 W------------------TSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQE 161

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
            +   A +L   M     E D V   NM+      G +   R +FD MP  +V +W AM+
Sbjct: 162 GRVDDARKLFDMMP----EKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMV 217

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           S Y+++     A KLF  M      P+R  ++    +   +G   SG+   A+SL  A  
Sbjct: 218 SGYARNGKVDVARKLFEVM------PERNEVSW---TAMLLGYTHSGRMREASSLFDAMP 268

Query: 437 IDNYVA-SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
           +   V  + +I  +      + A RVF  + E D   W++MI        ++EA   F++
Sbjct: 269 VKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRR 328

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M++  +     S  +VLS C  L+S   G+QVHAQ+ +  +  D++V S LI MY KCG+
Sbjct: 329 MQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGN 388

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  A+Q F+    K+ V WN MI GY+Q+G G+EA+ ++ DM +SGV PDD+TF+ +L+A
Sbjct: 389 LVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSA 448

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           CS+SG V  G+E+F +M+  + VEP ++HY C++D LGRA   +EA  L+++MP + D +
Sbjct: 449 CSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAI 508

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMS 735
           +W  LL +CR H  + LA+ A E+L +L+PKN+ PY LL+N+Y+  GRW D+  +RE + 
Sbjct: 509 VWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIK 568

Query: 736 ENCIVKDPAYS 746
              + K P  S
Sbjct: 569 ARSVTKLPGCS 579



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 226/489 (46%), Gaps = 88/489 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNR-------LIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           G+L HA      +FD+T L +R       ++  Y +      A  LF+KMP ++  SWN 
Sbjct: 36  GQLDHA----RKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNG 91

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           ++S   K+  L  A ++FD MP+RNVVSW +++   VRNG   +A  ++  M ++  V  
Sbjct: 92  LISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSW 151

Query: 120 HITLASVFKA-----STALLDVEHGRRCHGLVIKIG-------LD-----------KNIY 156
            + L  + +      +  L D+   +    +   IG       LD           +N+ 
Sbjct: 152 TVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVV 211

Query: 157 VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
              A++S YA+ G    A  +FE M E NEV++TAM+ G   + R+ EA  +F  M  K 
Sbjct: 212 TWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKP 271

Query: 217 VSI---------------------------DSVSLSSVLGVCAREGCGVES-DVFAQSDN 248
           V +                           D+ + S+++ V  R+G  +E+  +F +   
Sbjct: 272 VVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQR 331

Query: 249 K------------------FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           +                   +   HG+QVH   ++  F+ DL++++ L+ MY K G++  
Sbjct: 332 EGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVR 391

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A+ +F+  P + VV WN MI GY Q     +A+ +   M S G  PD+VT I +L AC  
Sbjct: 392 AKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSY 451

Query: 351 SGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           SG +K G E+F++M       P +  +  ++    +++   EA+KL  +M    ++PD  
Sbjct: 452 SGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMP---MEPDAI 508

Query: 406 TLAIILSSC 414
               +L +C
Sbjct: 509 VWGALLGAC 517



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 6/267 (2%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K  VA KL      RN +     L       Y+       A  LFD MP K +   N ++
Sbjct: 225 KVDVARKLFEVMPERNEVSWTAMLLG-----YTHSGRMREASSLFDAMPVKPVVVCNEMI 279

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                + +++ A ++F  M ER+  +W+ +I    R G E +AL ++ +M  EG      
Sbjct: 280 MGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFP 339

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           +L SV     +L  ++HG++ H  +++   D+++YVA+ L+++Y KCG    A  VF   
Sbjct: 340 SLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRF 399

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES- 240
              + V + +M++G ++     EAL +F  M    V  D V+   VL  C+  G   E  
Sbjct: 400 PLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGL 459

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           ++F     K+      +   CL   LG
Sbjct: 460 ELFETMKCKYQVEPGIEHYACLVDLLG 486


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 192/652 (29%), Positives = 337/652 (51%), Gaps = 59/652 (9%)

Query: 135 DVEHGRRCHGLVIKIG----LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
           D   GR  HG V++ G    LD  ++ AN LL++Y K G    A  +F+ M E N V+F 
Sbjct: 74  DARGGRAVHGHVVRRGGVGRLD--LFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFV 131

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC-AREGCGVESDVFAQSDNK 249
            ++   A+      A  +FR +  +   ++   L+++L +  A +  G+   V       
Sbjct: 132 TLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGV------- 184

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                     H    KLG + +  + + L+D Y+    +  AE +F+ +  +  V W  M
Sbjct: 185 ----------HSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------------- 349
           ++ Y +      A  +  +M+  G +P+     ++L A V                    
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294

Query: 350 ---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + GDIK  R  F+ +P   V   + M+S Y+QS  +++A +LF  
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +    V P+  +L+ +L +C  M  L+ GKQ+H  ++K     D +V + L+  Y+KC  
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + + ++F  + + + V WN+++ G S + L  EA   F +M+  +M  TQ ++++VL +
Sbjct: 415 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRA 474

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           CA  +S     Q+H  IEK  + ND  +G++LI+ Y KCG I  A + F  +  ++ ++W
Sbjct: 475 CASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISW 534

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I GYA +G   +A+ L+  M  S V+ +DITFVA+L+ CS +GLV+ G+ +F+SM++
Sbjct: 535 NAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRI 594

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           DHG++P ++HYTC++  LGRAG  ++A   I ++P     ++W  LLSSC +H NV L +
Sbjct: 595 DHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 654

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +AE++  ++P++   Y LL+N+Y++ G  D +  +R+ M    + K P  S
Sbjct: 655 FSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLS 706



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 149/614 (24%), Positives = 258/614 (42%), Gaps = 90/614 (14%)

Query: 6   AGKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            G+ +H H++R G     D F  N L+ +Y K     SA+ LFD+MP +++ S+  ++ A
Sbjct: 77  GGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQA 136

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             +  D E A  LF  +       W                         EG       L
Sbjct: 137 HAQRGDFEAAAALFRRL------RW-------------------------EGHEVNQFVL 165

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            ++ K + A+         H    K+G D N +V + L+  Y+ C     A  VF  +  
Sbjct: 166 TTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVR 225

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL--GVCAREGCGVESD 241
            + V +TAM+S  ++ D    A  +F  M       +  +L+SVL   VC          
Sbjct: 226 KDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVC---------- 275

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                       V G+ +H   IK   + + H+  +LLDMYAK GD+  A + F  +P  
Sbjct: 276 --------LPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYD 327

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VR 350
            V+  + MI+ Y Q  Q+ +A EL  R+      P+E +  ++L AC           + 
Sbjct: 328 DVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIH 387

Query: 351 SGDIKTGRE------------------------MFDSMPSPSVSSWNAMLSSYSQSENHK 386
           +  IK G E                        +F S+   +  SWN ++  +SQS   +
Sbjct: 388 NHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGE 447

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA+ +F EMQ   +   + T + +L +CA+   +    Q+H +  K+  + D  + + LI
Sbjct: 448 EALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLI 507

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
             Y+KC     A +VF  + E DI+ WN++I+G +L+    +A   F +M ++ +     
Sbjct: 508 DTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDI 567

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF-D 564
           +F  +LS C+       G  +   +  D G    +   + ++ +  + G +  A QF  D
Sbjct: 568 TFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGD 627

Query: 565 MMHGKNTVTWNEMI 578
           +    + + W  ++
Sbjct: 628 IPSAPSAMVWRALL 641



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 214/458 (46%), Gaps = 43/458 (9%)

Query: 45  LFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKA 104
           L D  PH       A+L    K  D++ A   F+ +P  +V+  + +IS   ++   E+A
Sbjct: 293 LNDTEPHVG----GALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQA 348

Query: 105 LSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL 164
             ++ ++     +P   +L+SV +A T ++ ++ G++ H   IKIG + +++V NAL+  
Sbjct: 349 FELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDF 408

Query: 165 YAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSL 224
           YAKC     ++ +F  + + NEV++  ++ G +++    EAL +F  M    +    V+ 
Sbjct: 409 YAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTY 468

Query: 225 SSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK 284
           SSVL  CA                  +   H  Q+HC   K  F  D  + NSL+D YAK
Sbjct: 469 SSVLRACAST----------------ASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAK 512

Query: 285 NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
            G +  A  +F +L ER ++SWN +I+GY    Q+  A+EL  RM     E +++T + +
Sbjct: 513 CGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVAL 572

Query: 345 LVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           L  C  +G +  G  +FDSM       PS+  +  ++    ++    +A++   ++    
Sbjct: 573 LSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIP--- 629

Query: 400 VKPDRTTLAIILSSC-----AAMGILESGKQVHAASLKTASHI---DNYVASG---LIGI 448
             P       +LSSC      A+G   + K +        +++   + Y A+G    + +
Sbjct: 630 SAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVAL 689

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
             K  RN +  R   ++P L  V     I   S+ S+D
Sbjct: 690 LRKSMRN-IGVR---KVPGLSWVEIKGEIHAFSVGSVD 723



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN--DIFVGSALIEMYCKCGDIYGARQFF 563
           F+ A  L  C     +  GR VH  + + G V   D+F  + L+ MY K G +  AR+ F
Sbjct: 60  FACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLF 119

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           D M  +N V++  ++  +AQ G  + A  L++ +   G + +      +L
Sbjct: 120 DRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTML 169


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 206/590 (34%), Positives = 317/590 (53%), Gaps = 40/590 (6%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           N+ ++ YA+ G  + A  VF+EM +   V++ +M++G  + +R  EA  +F  M  +   
Sbjct: 20  NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER--- 76

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            ++VS + ++    +    + S+     D    RNV                      ++
Sbjct: 77  -NTVSWNGLISGYVKNR--MVSEARKAFDTMPERNVVSW------------------TAM 115

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +  Y + G +  AE +F  +PE++VVSW VM+ G  Q  +  +A  L   M       D 
Sbjct: 116 VRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPV----KDV 171

Query: 339 VTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           V   NM+    + G +   RE+FD MP  +V SW  M+S Y Q+     A KLF  M   
Sbjct: 172 VARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVM--- 228

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
              P++  ++    +   MG  + G+   A+ L  A  +   VA   + I    Q  E+A
Sbjct: 229 ---PEKNEVSW---TAMLMGYTQGGRIEEASELFDAMPVKAVVACNAM-ILGFGQNGEVA 281

Query: 459 E--RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
           +  +VF +I E D   W++MI        ++EA   F  M++  +     S  +VLS CA
Sbjct: 282 KARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCA 341

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
            L+S   GRQVHA++ K  + +D+FV S LI MY KCGD+  ARQ FD    K+ V WN 
Sbjct: 342 SLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNS 401

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDH 636
           +I GYAQ+G  +EA++++ +M +SG+  D +TFV +L+ACS++G V  G+EIF SM+  +
Sbjct: 402 IITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKY 461

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA 696
            VEP  +HY CM+D LGRAG  ++A  LI +MP + D +IW  LL +CR H N+ LA+ A
Sbjct: 462 LVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVA 521

Query: 697 AEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A++L +L+PKN+ PY LL+NIY+S GRW D+  +R  M    + K P  S
Sbjct: 522 AKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCS 571



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 234/474 (49%), Gaps = 40/474 (8%)

Query: 56  SWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG 115
           ++N+ ++   +   +E A ++FDEMP++ +VSWN++++   +N    +A  +++KM    
Sbjct: 18  AYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERN 77

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
            V  +  ++   K       V   R+    +     ++N+    A++  Y + G    A 
Sbjct: 78  TVSWNGLISGYVKNRM----VSEARKAFDTMP----ERNVVSWTAMVRGYVQEGLVSEAE 129

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            +F +M E N V++T M+ GL +  R+ EA  +F +M  K    D V+ ++++    +EG
Sbjct: 130 TLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVK----DVVARTNMISGYCQEG 185

Query: 236 CGVES-DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
              E+ ++F   D    RNV                      +++  Y +NG +D A  +
Sbjct: 186 RLAEARELF---DEMPRRNVISW------------------TTMISGYVQNGQVDVARKL 224

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN-MLVACVRSGD 353
           F  +PE++ VSW  M+ GY Q  +  +A EL   M         V + N M++   ++G+
Sbjct: 225 FEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPV-----KAVVACNAMILGFGQNGE 279

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           +   R++FD +      +W+AM+  Y +     EA+ LF  MQ  GV+ +  +L  +LS 
Sbjct: 280 VAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSV 339

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           CA++  L+ G+QVHA  +K+    D +VAS LI +Y KC     A ++F R    DIV W
Sbjct: 340 CASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMW 399

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
           NS+I G + + L  EA   F +M  + M     +F  VLS+C+      +G ++
Sbjct: 400 NSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEI 453



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 211/462 (45%), Gaps = 77/462 (16%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N ++  Y + N    A++LFDKMP ++  SWN ++S   K+  +  A K FD MPERNVV
Sbjct: 51  NSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVV 110

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA-----STALLDV----- 136
           SW  ++   V+ GL  +A +++ +M  +  V   + L  + +      +  L D+     
Sbjct: 111 SWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKD 170

Query: 137 ------------EHGRRCHGLVIKIGLDK-NIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
                       + GR      +   + + N+     ++S Y + G    A  +FE M E
Sbjct: 171 VVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPE 230

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-------------------------- 217
            NEV++TAM+ G  +  R+ EA E+F  M  KAV                          
Sbjct: 231 KNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQI 290

Query: 218 -SIDSVSLSSVLGVCAREGCGVES-DVFA-------QSDNKFSRNV-----------HGQ 257
              D  + S+++ V  R+G  VE+ ++FA       QS+     +V           HG+
Sbjct: 291 REKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGR 350

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           QVH   +K  F++D+ +++ L+ MY K GD+  A  IF     + +V WN +I GY Q  
Sbjct: 351 QVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHG 410

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSW 372
              +A+++   M S G   D VT + +L AC  +G +K G E+F+SM S     P    +
Sbjct: 411 LVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHY 470

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
             M+    ++    +A+ L ++M    V+ D      +L +C
Sbjct: 471 ACMVDLLGRAGLVNDAMDLIQKMP---VEADAIIWGALLGAC 509



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 62/115 (53%), Gaps = 4/115 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA ++++    D F+ + LI +Y KC +   A+ +FD+   KDI  WN+I++   +
Sbjct: 349 GRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQ 408

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
              +E A ++F EM    +    V++  ++SA    G  ++ L ++  M ++  V
Sbjct: 409 HGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLV 463


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 196/667 (29%), Positives = 346/667 (51%), Gaps = 60/667 (8%)

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIG-------LDKNIYVANALLSLYAKCGWTKHAVP 176
           A++  A + L  +  GRR H  ++          L  N  + N L+++Y +C     A  
Sbjct: 48  AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQ 107

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VF+EM   N V++ ++++   +  R  +AL +F  M+R   + D  +L S +  C   G 
Sbjct: 108 VFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG- 166

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
               DV             G+QVH   +K    +DL + N+L+ MY+KNG +D   ++F 
Sbjct: 167 ----DVGT-----------GRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFE 211

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-----------------KSCGF----- 334
            + ++ ++SW  +IAG+ Q+    +A+++ + M                 ++CG      
Sbjct: 212 RIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWE 271

Query: 335 --EPDEVTSI------NMLVAC------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
             E     SI      ++ V C       R  ++ + R  F  + +P + SWN+++++YS
Sbjct: 272 YGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYS 331

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
                 EA+ LF EM+  G++PD  T+  +L +C     L  G+ +H+  +K     D  
Sbjct: 332 VEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVS 391

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           V + L+ +Y++C     A  VFH I + D+V WNS++   + ++   E    F  + ++E
Sbjct: 392 VCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSE 451

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
               + S   VLS+ A+L      +QVHA   K G V+D  + + LI+ Y KCG +  A 
Sbjct: 452 PSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAM 511

Query: 561 QFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           + F++M + ++  +W+ +I GYAQ GY  EA  L+  M + G++P+ +TF+ +LTACS  
Sbjct: 512 RLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRV 571

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           G V+ G   ++ M+ ++G+ P  +H +C++D L RAG   EA   ID+MP + D ++W+ 
Sbjct: 572 GFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKT 631

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL++ ++H ++ + KRAAE +  +DP +SA Y LL NIY++ G W++   +++ M  + +
Sbjct: 632 LLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGV 691

Query: 740 VKDPAYS 746
            K P  S
Sbjct: 692 KKSPGKS 698



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 176/677 (25%), Positives = 296/677 (43%), Gaps = 127/677 (18%)

Query: 7   GKLLHAHILRNG-------LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           G+ +H H++ +        L  +T L N LI +Y +C    SA+                
Sbjct: 63  GRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR---------------- 106

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
                          ++FDEMP RN VSW ++I+A V+NG    AL +++ M   G    
Sbjct: 107 ---------------QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAAD 151

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
              L S  +A T L DV  GR+ H   +K     ++ V NAL+++Y+K G       +FE
Sbjct: 152 QFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFE 211

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGV 238
            + + + +++ ++++G A+    +EAL++FR MI +     +     S    C   G   
Sbjct: 212 RIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSW- 270

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                           +G+Q+H L+IK   + DL++  SL DMYA+  ++DSA V F  +
Sbjct: 271 ---------------EYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRI 315

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------- 349
               +VSWN ++  Y  +   ++A+ L   M+  G  PD +T   +L ACV         
Sbjct: 316 EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGR 375

Query: 350 --------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                     R  D+ +  ++F  +    V +WN++L++ +Q  
Sbjct: 376 LIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHN 435

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
           + +E +KLF  +       DR +L  +LS+ A +G  E  KQVHA + K     D  +++
Sbjct: 436 HPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSN 495

Query: 444 GLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
            LI  Y+KC   + A R+F  +    D+  W+S+I G +      EAF  F +MR   + 
Sbjct: 496 TLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIR 555

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQ 561
           P   +F  VL++C+++    +G   ++ +E + G V      S ++++  + G +  A  
Sbjct: 556 PNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAAN 615

Query: 562 FFDMM-HGKNTVTW----------NEMIHG------------------------YAQNGY 586
           F D M    + + W          N+M  G                        YA +G 
Sbjct: 616 FIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGN 675

Query: 587 GDEAVRLYKDMIASGVK 603
            +E  RL K M  SGVK
Sbjct: 676 WNEFARLKKAMRTSGVK 692



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 10/173 (5%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDG-------YVNDIFVGSALIEMYCKCGDIYGAR 560
           +A ++S+C++L S  QGR+VH  +              +  +G+ LI MY +C     AR
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           Q FD M  +N V+W  +I  + QNG   +A+ L+  M+ SG   D     + + AC+  G
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166

Query: 621 LVDVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
            V  G ++  ++++ + G + I+ +   ++    + G   +  ML + +  KD
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQN--ALVTMYSKNGLVDDGFMLFERIKDKD 217


>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
 gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
          Length = 606

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 183/540 (33%), Positives = 293/540 (54%), Gaps = 43/540 (7%)

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG-DMDSAEVIFSNLPERSV 303
           Q+  K     HG Q H   IK G + D  + NSLL +Y K G ++  A  +F  L  + +
Sbjct: 68  QTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDL 127

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----- 358
           +SW  MI GY +  +  K++EL   M   G EP+  T   ++ AC   GD++ G+     
Sbjct: 128 ISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGV 187

Query: 359 ------------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                          +F  +P P    W +++S++++++ + +A
Sbjct: 188 VMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKA 247

Query: 389 IKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           +  F  M +  G+ PD  T   +L++C  +G L+ GK+VHA  + +    + +V S L+ 
Sbjct: 248 LGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVD 307

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM-FFKQMRQNEMYPTQF 506
           +Y KC+    ++ VF R+   ++V W +++ G   N  D E+ +  F++ ++ + Y    
Sbjct: 308 MYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNG-DFESVIRIFREGKKVDTY---- 362

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           SF TVL +CA L++  QG++VH Q  K     D+   SAL+++Y KCG I  A + F  M
Sbjct: 363 SFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRM 422

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             +N +TWN MI+G+AQNG G E  +L+ +MI  G++PD I+FV +L ACSH+GLVD G 
Sbjct: 423 SVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGK 482

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           + F +M   + ++P ++HY CMID LGRAG   EAE LI+   C+D+P +W VLL +C  
Sbjct: 483 KYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAA 542

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             +   A+R A++   L P +   Y  LAN+Y ++GRWDD   +R LM++  + K P  S
Sbjct: 543 SPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMPGTS 602



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 204/457 (44%), Gaps = 82/457 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCN-NTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G   H+H +++GL  D F+ N L+ LY K   N   A+ +FD + +KD+           
Sbjct: 79  GIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDL----------- 127

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                               +SW ++I+  V+    +K+L ++ +M   G  P   TL++
Sbjct: 128 --------------------ISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSA 167

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA + L D+  G+  HG+V+  G D N  ++ AL+ +Y +      A+ VF E+ +P+
Sbjct: 168 VIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPD 227

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFA 244
            + +T+++S   + D   +AL  F  M RK  +S D  +  +VL  C   G         
Sbjct: 228 AICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLG--------- 278

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                  R   G++VH   I  G   ++ + +SL+DMY K   ++ ++ +F  +  +++V
Sbjct: 279 -------RLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLV 331

Query: 305 SWNVMIAGYGQKYQSTKAIELL--------------------------------QRMKSC 332
           SW  ++ GY Q       I +                                 Q +K C
Sbjct: 332 SWTALLGGYCQNGDFESVIRIFREGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRC 391

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
            +  D VT   ++    + G I     +F  M   ++ +WN+M+  ++Q+    E  +LF
Sbjct: 392 CWR-DVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLF 450

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
            EM   G++PD  +   +L +C+  G+++ GK+  AA
Sbjct: 451 DEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAA 487



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GF 116
            A++    ++  ++ A  +F E+P+ + + W ++ISA  RN + +KAL  +  M  + G 
Sbjct: 201 TALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGL 260

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
            P   T  +V  A   L  ++ G+  H  VI  GL  N++V ++L+ +Y KC     +  
Sbjct: 261 SPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQC 320

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VF+ MS  N V++TA++ G  +       + +FR    +   +D+ S  +VL  CA    
Sbjct: 321 VFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFR----EGKKVDTYSFGTVLRACA---- 372

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                         +    G++VHC  +K     D+   ++L+D+YAK G +D A  IF 
Sbjct: 373 ------------GLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFV 420

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            +  R++++WN MI G+ Q  +  +  +L   M   G  PD ++ + +L AC  +G +  
Sbjct: 421 RMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQ 480

Query: 357 GREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL-AII 410
           G++ F +M       P +  +N M+    ++   +EA  L      R    D  +L  ++
Sbjct: 481 GKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCR----DEPSLWTVL 536

Query: 411 LSSCAA 416
           L +CAA
Sbjct: 537 LGACAA 542



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 142/308 (46%), Gaps = 6/308 (1%)

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           Y +S +  EAI +   + +  +       A +L +C        G Q H+ ++K+    D
Sbjct: 35  YCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTD 94

Query: 439 NYVASGLIGIYSKCQRNEL-AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
            +V + L+ +Y K   N   A RVF  +   D++ W SMI G        ++   F +M 
Sbjct: 95  RFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEML 154

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY-VNDIFVGSALIEMYCKCGDI 556
              + P  F+ + V+ +C+ L     G+  H  +   G+ +ND+ + +ALI+MY +   +
Sbjct: 155 GLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDV-ISTALIDMYGRNSAV 213

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS-GVKPDDITFVAILTA 615
             A   F  +   + + W  +I  + +N   D+A+  +  M    G+ PD  TF  +LTA
Sbjct: 214 DDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTA 273

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           C + G +  G E+ ++  +  G+   +   + ++D  G+    ++++ + D M  K + V
Sbjct: 274 CGNLGRLKQGKEV-HAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVK-NLV 331

Query: 676 IWEVLLSS 683
            W  LL  
Sbjct: 332 SWTALLGG 339



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 73/145 (50%), Gaps = 1/145 (0%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D+ + +A++    K   ++FAY++F  M  RN+++WN++I    +NG   +   ++++M
Sbjct: 394 RDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEM 453

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI-GLDKNIYVANALLSLYAKCGW 170
             EG  P +I+   V  A +    V+ G++    + ++  +   I   N ++ L  + G 
Sbjct: 454 IEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGL 513

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSG 195
            + A  + E  +  +E +   ++ G
Sbjct: 514 LEEAENLIENANCRDEPSLWTVLLG 538



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/110 (22%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   ++   + D    + L++LY+KC     A  +F +M  +++ +WN+++    +
Sbjct: 380 GKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQ 439

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMS 112
           +      ++LFDEM E  +    +S+  ++ A    GL ++    +  M+
Sbjct: 440 NGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMT 489


>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
 gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
          Length = 749

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 211/689 (30%), Positives = 341/689 (49%), Gaps = 56/689 (8%)

Query: 98  NGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYV 157
           NG  ++ +S Y+++   G     +++      + + L   HG+  H  +IK G D    +
Sbjct: 25  NGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACLIKQGFDSFTSI 84

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
            N+++  Y +CG    AV VF  M    + V++  ++ G      +V  L  F    R A
Sbjct: 85  GNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFT-NARVA 143

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
               ++S + VL + A    G + D              G  +H   IK GF A   + N
Sbjct: 144 GFEPNIS-TMVLVIQACRILGTKHD--------------GLILHGYLIKSGFWAISSVQN 188

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC-GFE 335
           SLL MY  + DM+ A  +F  + E+ V++W+VMI GY Q  +    +++ ++M    G E
Sbjct: 189 SLLSMYV-DADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIE 247

Query: 336 PDEVTSINMLVACVRSGDIKTGR-----------------------------------EM 360
           PD V  +++L AC  S D+ TGR                                   ++
Sbjct: 248 PDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKV 307

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F+ +   +  SWN+MLS +  +EN+ EA  L   M+   V+ D  TL  IL  C      
Sbjct: 308 FNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHP 367

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
              K +H   ++  S  +  V S LI  Y+KC   E+A  VF R+   D+V W++MI+G 
Sbjct: 368 FHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGF 427

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           +      EA   +++M ++ + P   +   +L +C+  +   + +  H    + G+ +++
Sbjct: 428 AHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEV 487

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            VG+A+++MY KCG+I  +R+ FD +  KN VTW+ MI  Y  NG   EA+ L+ +M   
Sbjct: 488 TVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRH 547

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G+KP+ +T +++L ACSH GLV+ G+ +F SM  + G+EP  +HY+CM+D LGRAG    
Sbjct: 548 GLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDT 607

Query: 661 AEMLIDEMP--CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
           A  +I  MP   K+   IW  LLS+CR +    L K A   +  L+P NSA Y + +++Y
Sbjct: 608 AIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMY 667

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           ++ G WDD   +R L  E  +     YSL
Sbjct: 668 AADGLWDDAARIRVLAKEKGVKVVAGYSL 696



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 246/552 (44%), Gaps = 87/552 (15%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           +H  GK LHA +++ G    T + N ++  Y +C                          
Sbjct: 62  SHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCG------------------------- 96

Query: 63  AQCKSDDLEFAYKLFDEMPE-RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                 D + A  +F+ M   R+ VSWN LI   + NG     L  +      GF P   
Sbjct: 97  ------DFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNIS 150

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+  V +A   L     G   HG +IK G      V N+LLS+Y      + A  +F+EM
Sbjct: 151 TMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVDAD-MECARELFDEM 209

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVES 240
            E + + ++ M+ G  + +     L+MFR M+    +  D V + SVL  CA        
Sbjct: 210 HEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACAS------- 262

Query: 241 DVFAQSDNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                     SR+V  G+ VH L I  GF+ DL + NSL+DMY+K  D  SA  +F+ + 
Sbjct: 263 ----------SRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEIS 312

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------- 348
           +R+ VSWN M++G+      ++A  L+  M+    E DEVT +N+L  C           
Sbjct: 313 QRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKS 372

Query: 349 -----VRSGD-------------------IKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                +R G                    I+   E+F  M    V SW+ M+S ++    
Sbjct: 373 IHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGK 432

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
             EAI +++EM    VKP+  T+  +L +C+    L+  K  H  +++     +  V + 
Sbjct: 433 PDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTA 492

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           ++ +YSKC     + R F ++   +IV W++MIA   +N L  EA   F +M+++ + P 
Sbjct: 493 VVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPN 552

Query: 505 QFSFATVLSSCA 516
             +  +VL++C+
Sbjct: 553 PVTTLSVLAACS 564



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 203/402 (50%), Gaps = 53/402 (13%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGF 116
           N++LS    +D +E A +LFDEM E++V++W+ +I   ++    +  L ++ KM    G 
Sbjct: 188 NSLLSMYVDAD-MECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGI 246

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
            P  + + SV KA  +  DV  GR  HGLVI  G D +++V N+L+ +Y+KC     A  
Sbjct: 247 EPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFK 306

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VF E+S+ N V++ +M+SG    +   EA  +   M ++ V  D V+L ++L +C     
Sbjct: 307 VFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQIC----- 361

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                        F    H + +HC+ I+ G EA+  + ++L+D YAK   ++ A  +F+
Sbjct: 362 -----------KYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFA 410

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------- 348
            +  R VVSW+ MI+G+    +  +AI + Q M     +P+ +T IN+L AC        
Sbjct: 411 RMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKR 470

Query: 349 ---------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                                       + G+I   R  FD +   ++ +W+AM+++Y  
Sbjct: 471 SKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGM 530

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +    EA+ LF EM+  G+KP+  T   +L++C+  G++E G
Sbjct: 531 NGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEG 572



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 251/536 (46%), Gaps = 68/536 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+H  ++  G   D F+ N LI++YSKC +  SA                        
Sbjct: 269 GRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSA------------------------ 304

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  +K+F+E+ +RN VSWN+++S  V N    +A S+ + M  E      +TL ++
Sbjct: 305 -------FKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNI 357

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +     +   H +  H ++I+ G + N  V +AL+  YAKC   + A  VF  M   + 
Sbjct: 358 LQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDV 417

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++ M+SG A   +  EA+ +++ M R  V  + +++ ++L     E C V +++    
Sbjct: 418 VSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLL-----EACSVTAEL---- 468

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             K S+  HG     + I+ GF +++ +  +++DMY+K G++ ++   F  L  +++V+W
Sbjct: 469 --KRSKWAHG-----VAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTW 521

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           + MIA YG    + +A+ L   MK  G +P+ VT++++L AC   G ++ G  +F SM  
Sbjct: 522 SAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQ 581

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    ++ M+    ++     AI++ + M    +K   +    +LS+C + G+ E
Sbjct: 582 ELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMP-HNLKNGASIWGSLLSACRSYGLTE 640

Query: 422 SGKQV--HAASLKTASHIDNYVASGLI---GIYSKCQRNELAERVFHRIPELDIVCWNSM 476
            GK+       L+ ++     VAS +    G++    R     RV  +   + +V     
Sbjct: 641 LGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARI----RVLAKEKGVKVV----- 691

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
            AG SL  +D +A  F      +      FS A  L  C K+    +G    A IE
Sbjct: 692 -AGYSLVHIDNKACRFVAGDGSHPRSDEIFSMAQQLHDCIKIDEKKEGNTWLAVIE 746



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 153/333 (45%), Gaps = 8/333 (2%)

Query: 361 FDSMPSPS-VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP-DRTTLAIILSSCAAMG 418
           F ++ S S + +W   +   S +   +E +  + E++  G++  D +    IL + + + 
Sbjct: 3   FSAIVSGSKLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLS 62

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE-LDIVCWNSMI 477
               GK +HA  +K        + + ++G Y +C   ++A  VF+ +    D V WN +I
Sbjct: 63  -HRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILI 121

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            G   N   +    +F   R     P   +   V+ +C  L +   G  +H  + K G+ 
Sbjct: 122 HGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFW 181

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
               V ++L+ MY    D+  AR+ FD MH K+ + W+ MI GY Q       +++++ M
Sbjct: 182 AISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKM 240

Query: 598 I-ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           +   G++PD +  V++L AC+ S  V  G  + + + +  G +  L     +ID   +  
Sbjct: 241 VLVPGIEPDGVVMVSVLKACASSRDVCTG-RLVHGLVIHRGFDCDLFVENSLIDMYSKCK 299

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
               A  + +E+  +++ V W  +LS   L+ N
Sbjct: 300 DAGSAFKVFNEISQRNN-VSWNSMLSGFVLNEN 331


>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 211/689 (30%), Positives = 341/689 (49%), Gaps = 56/689 (8%)

Query: 98  NGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYV 157
           NG  ++ +S Y+++   G     +++      + + L   HG+  H  +IK G D    +
Sbjct: 25  NGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACLIKQGFDSFTSI 84

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
            N+++  Y +CG    AV VF  M    + V++  ++ G      +V  L  F    R A
Sbjct: 85  GNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFT-NARVA 143

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
               ++S + VL + A    G + D              G  +H   IK GF A   + N
Sbjct: 144 GFEPNIS-TMVLVIQACRILGTKHD--------------GLILHGYLIKSGFWAISSVQN 188

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC-GFE 335
           SLL MY  + DM+ A  +F  + E+ V++W+VMI GY Q  +    +++ ++M    G E
Sbjct: 189 SLLSMYV-DADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIE 247

Query: 336 PDEVTSINMLVACVRSGDIKTGR-----------------------------------EM 360
           PD V  +++L AC  S D+ TGR                                   ++
Sbjct: 248 PDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKV 307

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F+ +   +  SWN+MLS +  +EN+ EA  L   M+   V+ D  TL  IL  C      
Sbjct: 308 FNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHP 367

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
              K +H   ++  S  +  V S LI  Y+KC   E+A  VF R+   D+V W++MI+G 
Sbjct: 368 FHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGF 427

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           +      EA   +++M ++ + P   +   +L +C+  +   + +  H    + G+ +++
Sbjct: 428 AHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEV 487

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            VG+A+++MY KCG+I  +R+ FD +  KN VTW+ MI  Y  NG   EA+ L+ +M   
Sbjct: 488 TVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRH 547

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G+KP+ +T +++L ACSH GLV+ G+ +F SM  + G+EP  +HY+CM+D LGRAG    
Sbjct: 548 GLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDT 607

Query: 661 AEMLIDEMP--CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
           A  +I  MP   K+   IW  LLS+CR +    L K A   +  L+P NSA Y + +++Y
Sbjct: 608 AIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMY 667

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           ++ G WDD   +R L  E  +     YSL
Sbjct: 668 AADGLWDDAARIRVLAKEKGVKVVAGYSL 696



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 246/552 (44%), Gaps = 87/552 (15%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           +H  GK LHA +++ G    T + N ++  Y +C                          
Sbjct: 62  SHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCG------------------------- 96

Query: 63  AQCKSDDLEFAYKLFDEMPE-RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                 D + A  +F+ M   R+ VSWN LI   + NG     L  +      GF P   
Sbjct: 97  ------DFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNIS 150

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+  V +A   L     G   HG +IK G      V N+LLS+Y      + A  +F+EM
Sbjct: 151 TMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVDAD-MECARELFDEM 209

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVES 240
            E + + ++ M+ G  + +     L+MFR M+    +  D V + SVL  CA        
Sbjct: 210 HEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACAS------- 262

Query: 241 DVFAQSDNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                     SR+V  G+ VH L I  GF+ DL + NSL+DMY+K  D  SA  +F+ + 
Sbjct: 263 ----------SRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEIS 312

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------- 348
           +R+ VSWN M++G+      ++A  L+  M+    E DEVT +N+L  C           
Sbjct: 313 QRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKS 372

Query: 349 -----VRSGD-------------------IKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                +R G                    I+   E+F  M    V SW+ M+S ++    
Sbjct: 373 IHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGK 432

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
             EAI +++EM    VKP+  T+  +L +C+    L+  K  H  +++     +  V + 
Sbjct: 433 PDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTA 492

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           ++ +YSKC     + R F ++   +IV W++MIA   +N L  EA   F +M+++ + P 
Sbjct: 493 VVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPN 552

Query: 505 QFSFATVLSSCA 516
             +  +VL++C+
Sbjct: 553 PVTTLSVLAACS 564



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 203/402 (50%), Gaps = 53/402 (13%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGF 116
           N++LS    +D +E A +LFDEM E++V++W+ +I   ++    +  L ++ KM    G 
Sbjct: 188 NSLLSMYVDAD-MECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGI 246

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
            P  + + SV KA  +  DV  GR  HGLVI  G D +++V N+L+ +Y+KC     A  
Sbjct: 247 EPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFK 306

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VF E+S+ N V++ +M+SG    +   EA  +   M ++ V  D V+L ++L +C     
Sbjct: 307 VFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQIC----- 361

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                        F    H + +HC+ I+ G EA+  + ++L+D YAK   ++ A  +F+
Sbjct: 362 -----------KYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFA 410

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------- 348
            +  R VVSW+ MI+G+    +  +AI + Q M     +P+ +T IN+L AC        
Sbjct: 411 RMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKR 470

Query: 349 ---------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                                       + G+I   R  FD +   ++ +W+AM+++Y  
Sbjct: 471 SKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGM 530

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +    EA+ LF EM+  G+KP+  T   +L++C+  G++E G
Sbjct: 531 NGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEG 572



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 251/536 (46%), Gaps = 68/536 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+H  ++  G   D F+ N LI++YSKC +  SA                        
Sbjct: 269 GRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSA------------------------ 304

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  +K+F+E+ +RN VSWN+++S  V N    +A S+ + M  E      +TL ++
Sbjct: 305 -------FKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNI 357

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +     +   H +  H ++I+ G + N  V +AL+  YAKC   + A  VF  M   + 
Sbjct: 358 LQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDV 417

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++ M+SG A   +  EA+ +++ M R  V  + +++ ++L     E C V +++    
Sbjct: 418 VSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLL-----EACSVTAEL---- 468

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             K S+  HG     + I+ GF +++ +  +++DMY+K G++ ++   F  L  +++V+W
Sbjct: 469 --KRSKWAHG-----VAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTW 521

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           + MIA YG    + +A+ L   MK  G +P+ VT++++L AC   G ++ G  +F SM  
Sbjct: 522 SAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQ 581

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    ++ M+    ++     AI++ + M    +K   +    +LS+C + G+ E
Sbjct: 582 ELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMP-DNLKNGASIWGSLLSACRSYGLTE 640

Query: 422 SGKQV--HAASLKTASHIDNYVASGLI---GIYSKCQRNELAERVFHRIPELDIVCWNSM 476
            GK+       L+ ++     VAS +    G++    R     RV  +   + +V     
Sbjct: 641 LGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARI----RVLAKEKGVKVV----- 691

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
            AG SL  +D +A  F      +      FS A  L  C K+    +G    A IE
Sbjct: 692 -AGYSLVHIDNKACRFVAGDGSHPRSDEIFSMAQQLHDCIKIDEKKEGNTWLAVIE 746



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 153/333 (45%), Gaps = 8/333 (2%)

Query: 361 FDSMPSPS-VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP-DRTTLAIILSSCAAMG 418
           F ++ S S + +W   +   S +   +E +  + E++  G++  D +    IL + + + 
Sbjct: 3   FSAIVSGSKLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLS 62

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE-LDIVCWNSMI 477
               GK +HA  +K        + + ++G Y +C   ++A  VF+ +    D V WN +I
Sbjct: 63  -HRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILI 121

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            G   N   +    +F   R     P   +   V+ +C  L +   G  +H  + K G+ 
Sbjct: 122 HGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFW 181

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
               V ++L+ MY    D+  AR+ FD MH K+ + W+ MI GY Q       +++++ M
Sbjct: 182 AISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKM 240

Query: 598 I-ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           +   G++PD +  V++L AC+ S  V  G  + + + +  G +  L     +ID   +  
Sbjct: 241 VLVPGIEPDGVVMVSVLKACASSRDVCTG-RLVHGLVIHRGFDCDLFVENSLIDMYSKCK 299

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
               A  + +E+  +++ V W  +LS   L+ N
Sbjct: 300 DAGSAFKVFNEISQRNN-VSWNSMLSGFVLNEN 331


>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 175/528 (33%), Positives = 295/528 (55%), Gaps = 39/528 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G  +H   +K G ++D+ +SN +L+MYAK G    A  +F  + E+++VSW+ MI+GY Q
Sbjct: 22  GLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQ 81

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGDIKTGRE----- 359
             +   AI+L  +M      P+E    +++ AC           + S  +K G E     
Sbjct: 82  AGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFV 138

Query: 360 -------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                              +F + P P+  S+NA+++ + +++  +  ++ F+ M+ +G+
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL 198

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
            PDR     +L  C     L+ G ++H  ++K       ++ + +I +YS+    + AE+
Sbjct: 199 IPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEK 258

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLS 519
            F  I E D++ WN++IA  S      +    FK M  +  + P  F+F + L++CA L+
Sbjct: 259 AFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLA 318

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S   G+Q+HA + +     D+ VG+AL+ MY KCG I  A   F  M   N V+WN +I 
Sbjct: 319 SMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIA 378

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G+  +G G+ AV L++ M ASG++PD +TF+ +LTAC+H+GLVD G   FNSM+  +G+ 
Sbjct: 379 GFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIA 438

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P ++H++C+ID LGRAG  +EAE  + + P  +DPV+   LLS+ RLH +V + +R A+ 
Sbjct: 439 PDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKW 498

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           L +L P  ++PY LL+N+Y+S G WD +   R+ +  + + K+P +SL
Sbjct: 499 LLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSL 546



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 228/478 (47%), Gaps = 56/478 (11%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           TL+S+    +    +  G   H  V+K G   +++++N +L++YAKCG T  A  VF+EM
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E N V+++AM+SG  +      A++++  M    +  +    +SV+  CA         
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACA--------- 112

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    S    GQ++H  ++K G+E+   +SNSL+ MY K      A  +F+N PE 
Sbjct: 113 -------SLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEP 165

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
           + VS+N +I G+ +  Q  + +E  + M+  G  PD    + +L  C  + ++K G E+ 
Sbjct: 166 NCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELH 225

Query: 361 -------FDSMP---------------------------SPSVSSWNAMLSSYSQSENHK 386
                   DS P                              V SWN ++++ S  ++H 
Sbjct: 226 CQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHA 285

Query: 387 EAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           + +++F+ M +   V+PD  T    L++CA +  +  GKQ+HA  ++T  + D  V + L
Sbjct: 286 KGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNAL 345

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC     A  +F ++   ++V WN++IAG   + L   A   F+QM  + + P  
Sbjct: 346 VNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDS 405

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQF 562
            +F  +L++C       +G+     +E+  G   DI   S LI+M  + G +  A ++
Sbjct: 406 VTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEY 463



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 233/523 (44%), Gaps = 98/523 (18%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G  LHA +L+ G   D F+ N ++ +Y+KC +T                      
Sbjct: 17  KALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHT---------------------- 54

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                     FA ++FDEM E+N+VSW+ +IS   + G  + A+ +Y++M     VP   
Sbjct: 55  ---------TFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEY 102

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
             ASV  A  +L  V  G++ H   +K G +   +V+N+L+S+Y KC     A+ VF   
Sbjct: 103 VFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNT 162

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            EPN V++ A+++G  +  ++   LE F+LM ++ +  D  +   VLG+C          
Sbjct: 163 PEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICT--------- 213

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
               +     R   G ++HC T+KL  ++   + N ++ MY++   +  AE  F  + E+
Sbjct: 214 ----TTENLKR---GAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEK 266

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVAC------------ 348
            V+SWN +IA         K + + + M +     PD+ T  + L AC            
Sbjct: 267 DVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQI 326

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G I    ++F  M   ++ SWN +++ +      
Sbjct: 327 HAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLG 386

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK----TASHIDNYV 441
           + A++LF +M   G++PD  T   +L++C   G+++ G Q++  S++     A  I+++ 
Sbjct: 387 ERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKG-QLYFNSMEETYGIAPDIEHF- 444

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
            S LI +  +  R   AE    + P      WN  +  +SL S
Sbjct: 445 -SCLIDMLGRAGRLNEAEEYMRKFP-----FWNDPVVLVSLLS 481



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 195/432 (45%), Gaps = 56/432 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+  L+ G    +F+ N LI +Y KCN                          QC 
Sbjct: 120 GQKIHSRSLKFGYESISFVSNSLISMYMKCN--------------------------QC- 152

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           SD    A  +F   PE N VS+N LI+  V N   E+ L  +  M  +G +P       V
Sbjct: 153 SD----ALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGV 208

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               T   +++ G   H   +K+ LD   ++ N ++++Y++    + A   F  + E + 
Sbjct: 209 LGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDV 268

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +++  +++  +  D   + L +F+ M  +  V  D  + +S L  CA             
Sbjct: 269 ISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACA------------- 315

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +   HG+Q+H   ++     DL + N+L++MYAK G +  A  IFS +   ++VS
Sbjct: 316 ---GLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVS 372

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN +IAG+G      +A+EL ++M + G  PD VT I +L AC  +G +  G+  F+SM 
Sbjct: 373 WNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSME 432

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                +P +  ++ ++    ++    EA +  R+  F     D   L  +LS+    G +
Sbjct: 433 ETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWN---DPVVLVSLLSASRLHGDV 489

Query: 421 ESGKQVHAASLK 432
             G+++    LK
Sbjct: 490 VIGERLAKWLLK 501



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 152/302 (50%), Gaps = 17/302 (5%)

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           TL+ +L  C+    L  G  +HAA LKT +  D ++++ ++ +Y+KC     A +VF  +
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
            E ++V W++MI+G         A   + QM    + P ++ FA+V+S+CA LS+   G+
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           ++H++  K GY +  FV ++LI MY KC     A   F      N V++N +I G+ +N 
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF-NSMQLDHGVEPILDH 644
             +  +  +K M   G+ PD   F+ +L  C+ +  +  G E+   +++L+    P + +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241

Query: 645 YTCMIDCLGRAGHFHEAE---MLIDEMPCKDDPVIWEVLLSSCRL---HA-NVRLAKRAA 697
              +I          EAE    LI+E     D + W  L+++C     HA  +R+ K   
Sbjct: 242 --VIITMYSELNLIQEAEKAFRLIEE----KDVISWNTLIAACSHCDDHAKGLRVFKHMT 295

Query: 698 EE 699
           EE
Sbjct: 296 EE 297


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 187/524 (35%), Positives = 289/524 (55%), Gaps = 42/524 (8%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G   H   +KLG   D  + N++LDMYAKNG +D A  +F  + ER++  WN MI+G  +
Sbjct: 114 GNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWK 173

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
               T+A+ L   M +     + +T  +M+    + GD+++ R  FD MP  SV SWNAM
Sbjct: 174 SGNETEAVVLFNMMPA----RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAM 229

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG-------ILESGKQVHA 428
            S+Y+Q E  KEA+ LF +M   G+ PD TT  + +SSC+++G       IL    Q H 
Sbjct: 230 QSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI 289

Query: 429 -----------------ASLKTASHIDNYVASG--------LIGIYSKCQRNELAERVFH 463
                             +L+ A +I + + S         +I  Y++  +  LA  +F 
Sbjct: 290 VLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFD 349

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQFSFATVLSSCAKLSSSF 522
            +P+ D+V WNSMIAG + N     +   FK+M    ++ P + + A+VLS+C  + +  
Sbjct: 350 NMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALK 409

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
               V   + +      I   ++LI MY KCG +  A + F  M  ++ V++N +I G+A
Sbjct: 410 LSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFA 469

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
            NG+G EA++L   M   G++PD +T++ +LTACSH+GL++ G  +F S+Q      P +
Sbjct: 470 ANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTV 524

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           DHY CM+D LGRAG   EA+MLI  MP K    ++  LL++ R+H  V L + AA +LF 
Sbjct: 525 DHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFE 584

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L+P+N   Y LL+NIY+S GRW+D++ VRE+M +  + K    S
Sbjct: 585 LEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMS 628



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 217/469 (46%), Gaps = 94/469 (20%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKM----------- 49
           K A  +G L HA++L+ G  DD F+ N ++++Y+K      A++LF++M           
Sbjct: 108 KLAGKSGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSM 167

Query: 50  --------------------PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWN 89
                               P ++I +W ++++   K  DLE A + FDEMPER+VVSWN
Sbjct: 168 ISGCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWN 227

Query: 90  NLISALVRNGLEEKALSVYNKMSNEGFVP------------------------------T 119
            + SA  +    ++AL+++++M  EG  P                               
Sbjct: 228 AMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQK 287

Query: 120 HITLASVFKASTALLDVEHGRR-----CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           HI L S  K  TALLD+ H +         +  ++G  +N    N ++S Y + G    A
Sbjct: 288 HIVLNSFVK--TALLDM-HAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLA 344

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAR 233
             +F+ M + + V++ +M++G A+      ++E+F+ MI    +  D V+++SVL  C  
Sbjct: 345 RELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGH 404

Query: 234 EGCGVES----DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            G    S    D+  + +                IKLG        NSL+ MY+K G + 
Sbjct: 405 IGALKLSYWVLDIVREKN----------------IKLGISG----FNSLIFMYSKCGSVA 444

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
            A  IF  +  R VVS+N +I+G+       +AI+L+  M+  G EPD VT I +L AC 
Sbjct: 445 DAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACS 504

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
            +G +  G+ +F S+ +P+V  +  M+    ++    EA  L + M  +
Sbjct: 505 HAGLLNEGKNVFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMK 553



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 125/577 (21%), Positives = 225/577 (38%), Gaps = 133/577 (23%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYS---WNAILSAQCKSDDLEFAY--KLFDEMPER 83
           L+ L SK +N    +     + H  ++S   W ++L   C       AY   +F   P  
Sbjct: 4   LVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSP 63

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           +   ++ ++    R G   + +S++    +    P       + K     L  + G   H
Sbjct: 64  DASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIK-----LAGKSGNLFH 118

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
             V+K+G   + ++ NA+L +YAK G    A  +FE+M+E     + +M+SG  K+    
Sbjct: 119 AYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNET 178

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           EA+ +F +M  + +    ++ +S++   A+ G                            
Sbjct: 179 EAVVLFNMMPARNI----ITWTSMVTGYAKMG---------------------------- 206

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
                                  D++SA   F  +PERSVVSWN M + Y QK    +A+
Sbjct: 207 -----------------------DLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEAL 243

Query: 324 ELLQRMKSCGFEPDEVTSINMLVAC----------------------------------- 348
            L  +M   G  PD+ T +  + +C                                   
Sbjct: 244 NLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMH 303

Query: 349 VRSGDIKTGREMFDSMPSP--------------------------------SVSSWNAML 376
            + G+++  R +FD + S                                  V SWN+M+
Sbjct: 304 AKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMI 363

Query: 377 SSYSQSENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           + Y+Q+     +I+LF+EM     ++PD  T+A +LS+C  +G L+    V     +   
Sbjct: 364 AGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNI 423

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
            +     + LI +YSKC     A R+F  +   D+V +N++I+G + N    EA      
Sbjct: 424 KLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLT 483

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           M +  + P   ++  VL++C+      +G+ V   I+
Sbjct: 484 MEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ 520



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 160/350 (45%), Gaps = 55/350 (15%)

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F S PSP  S ++ ML  YS+   H + + LF+      ++P +  + I L   A    
Sbjct: 56  IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRP-QPFVYIYLIKLAG--- 111

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
            +SG   HA  LK     D+++ + ++ +Y+K  + +LA  +F ++ E  +  WNSMI+G
Sbjct: 112 -KSGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
              +  + EA + F  M      P +                                 +
Sbjct: 171 CWKSGNETEAVVLFNMM------PAR---------------------------------N 191

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           I   ++++  Y K GD+  AR++FD M  ++ V+WN M   YAQ     EA+ L+  M+ 
Sbjct: 192 IITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLE 251

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGH 657
            G+ PDD T+V  +++CS  G   +   I   +   H    +L+ +  T ++D   + G+
Sbjct: 252 EGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKH---IVLNSFVKTALLDMHAKFGN 308

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA-AEELFRLDPK 706
              A  + DE+  + + V W +++S     A  R+ K + A ELF   PK
Sbjct: 309 LEIARNIFDELGSQRNAVTWNIMIS-----AYTRVGKLSLARELFDNMPK 353


>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 757

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 213/705 (30%), Positives = 348/705 (49%), Gaps = 61/705 (8%)

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF----KASTALLDVEHGR 140
           ++SW   I  L  N    + +S Y +++N G +  H+   ++F    KA + L  ++ G+
Sbjct: 27  LLSWTLRIKELSSNEKWHEVISQYYEITNAG-ISHHLLDVTLFPPVLKACSYLSYID-GK 84

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
             H  +IK   D    + N++L+ Y KCG    AV VF+ M   + V++  ++ G     
Sbjct: 85  CLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYG 144

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
            +VE L  F   I   V+    ++S+++             +  Q+         G Q+H
Sbjct: 145 ALVEGLWQF---INARVAGFEPNISTLV-------------LLVQACRSLRAKQEGLQLH 188

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
              I+ G  A   + NS L MYA + DMD A ++F  +PE+ V+SW+ MI GY Q  +  
Sbjct: 189 GYLIQSGLWASWSVQNSFLCMYA-DVDMDCARILFDEMPEKDVISWSAMIGGYVQYLEDQ 247

Query: 321 KAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGR--------------------- 358
             +++ Q+M S     PD V  +++L AC  S +I  GR                     
Sbjct: 248 IGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSL 307

Query: 359 --------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
                         E+F  MP  +  SWN++LS    ++ + EA+ L   M+  G++ D 
Sbjct: 308 IDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADE 367

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
            TL   L  C         K VH A+++     +  V + LI  Y+KC   ELA  VF R
Sbjct: 368 VTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSR 427

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
               D+V W++MIAG +      EA   F++M +    P   +   +L +C+  +   + 
Sbjct: 428 TRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRS 487

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
              H    + G   ++ VG+A+++MY KCG+I  +R+ F+ +  KN +TW+ MI  Y  N
Sbjct: 488 MWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMN 547

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G   EA+ L   M +  +KP+ +T++++LTACSH GLV++G+ +F SM  DHGV+P  +H
Sbjct: 548 GLAHEALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEH 607

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMP--CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           Y+CM+D L RAG   +A  LI  MP   +    +W  LLS+CR + +  L ++A  ++  
Sbjct: 608 YSCMVDMLSRAGKLDDAMELIRMMPETFRAGASVWGALLSACRTYRSSTLGEKAVYQVLE 667

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           L+P N A Y L +++Y+S G WD+   ++ L  E  +     YS+
Sbjct: 668 LEPLNLAGYLLASSMYASDGLWDNAARMKLLARERGVRAVAGYSI 712



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 163/593 (27%), Positives = 277/593 (46%), Gaps = 61/593 (10%)

Query: 13  HILRNGLFDDTF-LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLE 71
           H+L   LF      C+ L  +  KC +    +  FD          N+IL+   K  +L+
Sbjct: 61  HLLDVTLFPPVLKACSYLSYIDGKCLHACLIKTAFDSFTSIG----NSILNFYIKCGELD 116

Query: 72  FAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
            A  +FD M  R+ VSWN LI   +  G   + L  +      GF P   TL  + +A  
Sbjct: 117 TAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACR 176

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
           +L   + G + HG +I+ GL  +  V N+ L +YA       A  +F+EM E + ++++A
Sbjct: 177 SLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYADVD-MDCARILFDEMPEKDVISWSA 235

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           M+ G  +       L++F+ M+  + ++ D V L SVL  CA                  
Sbjct: 236 MIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACAN----------------- 278

Query: 251 SRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
           S N+  G+ VH LTI  G ++DL + NSL+DMY+K  D  SA  +FS +P R+ VSWN +
Sbjct: 279 SVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSL 338

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VRSGD 353
           ++G     + ++A+ L+  M++ G E DEVT +N L  C                +R G 
Sbjct: 339 LSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGC 398

Query: 354 -------------------IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                              I+   E+F       V  W+ M++ ++      EAI +F++
Sbjct: 399 ESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQK 458

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M      P+  T+  +L +C+    L+     H A+++     +  V + ++ +YSKC  
Sbjct: 459 MNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGE 518

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E + + F++IP+ +I+ W++MIA   +N L  EA     QM+ +E+ P   ++ +VL++
Sbjct: 519 IEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTA 578

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDIYGARQFFDMM 566
           C+       G  V   + +D  V+  F   S +++M  + G +  A +   MM
Sbjct: 579 CSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMM 631



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 200/413 (48%), Gaps = 53/413 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+H   +  GL  D F+ N LI++YSKC +  SA                        
Sbjct: 285 GRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSA------------------------ 320

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  +++F EMP RN VSWN+L+S L+ N    +AL +   M  EG     +TL + 
Sbjct: 321 -------FEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNC 373

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +         H +  H   I+ G + N  V N+L+  YAKC   + A  VF      + 
Sbjct: 374 LQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDV 433

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V ++ M++G A   +  EA+ +F+ M       ++V++ ++L     + C V +++    
Sbjct: 434 VLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLL-----QACSVSAEL---- 484

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             K S   HG       I+ G  A++ +  +++DMY+K G+++++   F+ +P++++++W
Sbjct: 485 --KRSMWAHGA-----AIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITW 537

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           + MIA YG    + +A+ LL +MKS   +P+ +T +++L AC   G ++ G  +F SM  
Sbjct: 538 STMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQ 597

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                P    ++ M+   S++    +A++L R M     +   +    +LS+C
Sbjct: 598 DHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMMP-ETFRAGASVWGALLSAC 649



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 86/406 (21%), Positives = 160/406 (39%), Gaps = 98/406 (24%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H   +R G   +  + N LI+ Y+KCN                              
Sbjct: 387 KAVHCATIRRGCESNEIVLNSLIDAYAKCNL----------------------------- 417

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF-VPTHITLASV 126
             +E A+++F     R+VV W+ +I+     G  ++A++V+ KM NEG  VP  +T+ ++
Sbjct: 418 --IELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKM-NEGIEVPNAVTIINL 474

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE--- 183
            +A +   +++     HG  I+ GL   + V  A++ +Y+KCG  + +   F ++ +   
Sbjct: 475 LQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNI 534

Query: 184 --------------------------------PNEVTFTAMMSGLAKTDRVVEALEMFRL 211
                                           PN +T+ ++++  +    V   L +F+ 
Sbjct: 535 ITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKS 594

Query: 212 MI--------------------RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           MI                    R     D++ L  ++    R G  V   + +      S
Sbjct: 595 MIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMMPETFRAGASVWGALLSACRTYRS 654

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLL--DMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
             +  + V+ +   L  E  L+L+  LL   MYA +G  D+A  +     ER V +    
Sbjct: 655 STLGEKAVYQV---LELEP-LNLAGYLLASSMYASDGLWDNAARMKLLARERGVRA---- 706

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
           +AGY   +  +KA + +   KSC    +    +N L  C++   I+
Sbjct: 707 VAGYSIVHVDSKAHKFVAGDKSCSQAGNIHHMLNQLHFCMKIDQIE 752


>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 175/528 (33%), Positives = 295/528 (55%), Gaps = 39/528 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G  +H   +K G ++D+ +SN +L+MYAK G    A  +F  + E+++VSW+ MI+GY Q
Sbjct: 22  GLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQ 81

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGDIKTGRE----- 359
             +   AI+L  +M      P+E    +++ AC           + S  +K G E     
Sbjct: 82  AGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFV 138

Query: 360 -------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                              +F + P P+  S+NA+++ + +++  +  ++ F+ M+ +G+
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL 198

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
            PDR     +L  C     L+ G ++H  ++K       ++ + +I +YS+    + AE+
Sbjct: 199 IPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEK 258

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLS 519
            F  I E D++ WN++IA  S      +    FK M  +  + P  F+F + L++CA L+
Sbjct: 259 AFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLA 318

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S   G+Q+HA + +     D+ VG+AL+ MY KCG I  A   F  M   N V+WN +I 
Sbjct: 319 SMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIA 378

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G+  +G G+ AV L++ M ASG++PD +TF+ +LTAC+H+GLVD G   FNSM+  +G+ 
Sbjct: 379 GFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIA 438

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P ++H++C+ID LGRAG  +EAE  + + P  +DPV+   LLS+ RLH +V + +R A+ 
Sbjct: 439 PDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKW 498

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           L +L P  ++PY LL+N+Y+S G WD +   R+ +  + + K+P +SL
Sbjct: 499 LLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSL 546



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 228/478 (47%), Gaps = 56/478 (11%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           TL+S+    +    +  G   H  V+K G   +++++N +L++YAKCG T  A  VF+EM
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E N V+++AM+SG  +      A++++  M    +  +    +SV+  CA         
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACA--------- 112

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    S    GQ++H  ++K G+E+   +SNSL+ MY K      A  +F+N PE 
Sbjct: 113 -------SLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEP 165

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
           + VS+N +I G+ +  Q  + +E  + M+  G  PD    + +L  C  + ++K G E+ 
Sbjct: 166 NCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELH 225

Query: 361 -------FDSMP---------------------------SPSVSSWNAMLSSYSQSENHK 386
                   DS P                              V SWN ++++ S  ++H 
Sbjct: 226 CQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHA 285

Query: 387 EAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           + +++F+ M +   V+PD  T    L++CA +  +  GKQ+HA  ++T  + D  V + L
Sbjct: 286 KGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNAL 345

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC     A  +F ++   ++V WN++IAG   + L   A   F+QM  + + P  
Sbjct: 346 VNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDS 405

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQF 562
            +F  +L++C       +G+     +E+  G   DI   S LI+M  + G +  A ++
Sbjct: 406 VTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEY 463



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 233/523 (44%), Gaps = 98/523 (18%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G  LHA +L+ G   D F+ N ++ +Y+KC +T                      
Sbjct: 17  KALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHT---------------------- 54

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                     FA ++FDEM E+N+VSW+ +IS   + G  + A+ +Y++M     VP   
Sbjct: 55  ---------TFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEY 102

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
             ASV  A  +L  V  G++ H   +K G +   +V+N+L+S+Y KC     A+ VF   
Sbjct: 103 VFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNT 162

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            EPN V++ A+++G  +  ++   LE F+LM ++ +  D  +   VLG+C          
Sbjct: 163 PEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICT--------- 213

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
               +     R   G ++HC T+KL  ++   + N ++ MY++   +  AE  F  + E+
Sbjct: 214 ----TTENLKR---GAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEK 266

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVAC------------ 348
            V+SWN +IA         K + + + M +     PD+ T  + L AC            
Sbjct: 267 DVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQI 326

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G I    ++F  M   ++ SWN +++ +      
Sbjct: 327 HAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLG 386

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK----TASHIDNYV 441
           + A++LF +M   G++PD  T   +L++C   G+++ G Q++  S++     A  I+++ 
Sbjct: 387 ERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKG-QLYFNSMEETYGIAPDIEHF- 444

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
            S LI +  +  R   AE    + P      WN  +  +SL S
Sbjct: 445 -SCLIDMLGRAGRLNEAEEYMRKFP-----FWNDPVVLVSLLS 481



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 195/432 (45%), Gaps = 56/432 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+  L+ G    +F+ N LI +Y KCN                          QC 
Sbjct: 120 GQKIHSRSLKFGYESISFVSNSLISMYMKCN--------------------------QC- 152

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           SD    A  +F   PE N VS+N LI+  V N   E+ L  +  M  +G +P       V
Sbjct: 153 SD----ALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGV 208

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               T   +++ G   H   +K+ LD   ++ N ++++Y++    + A   F  + E + 
Sbjct: 209 LGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDV 268

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +++  +++  +  D   + L +F+ M  +  V  D  + +S L  CA             
Sbjct: 269 ISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACA------------- 315

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +   HG+Q+H   ++     DL + N+L++MYAK G +  A  IFS +   ++VS
Sbjct: 316 ---GLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVS 372

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN +IAG+G      +A+EL ++M + G  PD VT I +L AC  +G +  G+  F+SM 
Sbjct: 373 WNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSME 432

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                +P +  ++ ++    ++    EA +  R+  F     D   L  +LS+    G +
Sbjct: 433 ETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWN---DPVVLVSLLSASRLHGDV 489

Query: 421 ESGKQVHAASLK 432
             G+++    LK
Sbjct: 490 VIGERLAKWLLK 501



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 152/302 (50%), Gaps = 17/302 (5%)

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           TL+ +L  C+    L  G  +HAA LKT +  D ++++ ++ +Y+KC     A +VF  +
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
            E ++V W++MI+G         A   + QM    + P ++ FA+V+S+CA LS+   G+
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           ++H++  K GY +  FV ++LI MY KC     A   F      N V++N +I G+ +N 
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF-NSMQLDHGVEPILDH 644
             +  +  +K M   G+ PD   F+ +L  C+ +  +  G E+   +++L+    P + +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241

Query: 645 YTCMIDCLGRAGHFHEAE---MLIDEMPCKDDPVIWEVLLSSCRL---HA-NVRLAKRAA 697
              +I          EAE    LI+E     D + W  L+++C     HA  +R+ K   
Sbjct: 242 --VIITMYSELNLIQEAEKAFRLIEE----KDVISWNTLIAACSHCDDHAKGLRVFKHMT 295

Query: 698 EE 699
           EE
Sbjct: 296 EE 297


>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Glycine max]
          Length = 722

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 216/716 (30%), Positives = 378/716 (52%), Gaps = 64/716 (8%)

Query: 86  VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGL 145
           +  N++++AL R+    ++L ++   ++  F P H  L++   A+        G + H L
Sbjct: 12  IKLNHMLAALARSNQHTQSLKLFVH-AHSSFTPDHYILSTAITAAANARRAAFGAQLHAL 70

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPV-FEEMSEPNEVTFTAMMSGLAKTDRVVE 204
            ++ GL  + +VAN+LLSLYAK      +V + F+E+  P+  ++T ++S  AK D V  
Sbjct: 71  AVRTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLDSVEH 130

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREG--------------CGVESD--VFAQSDN 248
           AL++F  + +  +++     ++V+  CA +G               GV++D   FA   +
Sbjct: 131 ALKVFDGIPKGHIAV----WNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATMLS 186

Query: 249 KFSRNV--HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE---RSV 303
             S  +  +G+ VH + IK GF     + NSL+ MY K G +  A  +F    E   R  
Sbjct: 187 LCSLELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDY 246

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--VRSG------DIK 355
           VS+N MI G+    +S  A  + + M+   F+P EVT ++++ +C  +R+G       IK
Sbjct: 247 VSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSSLRAGCQAQSQAIK 306

Query: 356 TG------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
            G                        + +F+ M    V SWN M+S + Q    +EA+  
Sbjct: 307 MGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLS 366

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           + +M+  G++PD  T   +L++  ++ ++E    +H+   K+   +   V + L+  Y +
Sbjct: 367 YLKMRREGIEPDEFTYGSLLAATDSLQVVE---MIHSLLCKSGL-VKIEVLNALVSAYCR 422

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
             + + A ++F  +P   ++ WNS+I+G  +N   ++    F  +   ++ P  +S + V
Sbjct: 423 HGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLV 482

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS C+ +S+   G+QVH  I + G+ +++ +G+AL+ MY KCG +  A + FD M  ++T
Sbjct: 483 LSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDT 542

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIAS-GVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           +TWN +I  YAQ+G G+EAV  ++ M  S G+KPD  TF ++L+ACSH+GLVD G+ IF+
Sbjct: 543 ITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFD 602

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           +M   +G  P +DH++C++D LGR+G+  EAE +I          I   L S+C  H N+
Sbjct: 603 TMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKSGYFGAHSNICWSLFSACAAHGNL 662

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            L +  A  +   D  N + Y LL+NI ++ G+W++   +RE+M E   +K P  S
Sbjct: 663 GLGRTVARLILERDHNNPSVYVLLSNICAAAGQWEEAANLREMMREFGTIKQPGCS 718



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 157/546 (28%), Positives = 267/546 (48%), Gaps = 62/546 (11%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCN-NTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           LHA  +R GL   + + N L+ LY+K + +  S +  F ++   D YSW  +LSA  K D
Sbjct: 67  LHALAVRTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLD 126

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
            +E A K+FD +P+ ++  WN +I+     G  + A  ++  M+  G      T A++  
Sbjct: 127 SVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATMLS 186

Query: 129 -ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE- 186
             S  L D  +GR  H +VIK G      V N+L+++Y KCG    A  VFEE  E    
Sbjct: 187 LCSLELFD--YGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSR 244

Query: 187 --VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA--REGCGVESDV 242
             V++ AM+ G A  +R  +A  +FR M +       V+  SV+  C+  R GC  +S  
Sbjct: 245 DYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSSLRAGCQAQSQ- 303

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                                IK+GF   + ++N+++ MY+  G++   + IF  + ER 
Sbjct: 304 --------------------AIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERD 343

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------- 348
           VVSWN+M++ + Q+    +A+    +M+  G EPDE T  ++L A               
Sbjct: 344 VVSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAATDSLQVVEMIHSLLC 403

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             R G IK   ++F  +P  S+ SWN+++S +  + +  + ++ 
Sbjct: 404 KSGLVKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQ 463

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F  +    VKP+  +L+++LS C++M  +  GKQVH   L+     +  + + L+ +Y+K
Sbjct: 464 FSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAK 523

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFAT 510
           C   + A RVF  + E D + WN++I+  + +    EA   F+ M+ +  + P Q +F +
Sbjct: 524 CGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTS 583

Query: 511 VLSSCA 516
           VLS+C+
Sbjct: 584 VLSACS 589



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 143/300 (47%), Gaps = 20/300 (6%)

Query: 16  RNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYK 75
           R G+  D F    L+              L  K     I   NA++SA C+   ++ A++
Sbjct: 372 REGIEPDEFTYGSLLAATDSLQVVEMIHSLLCKSGLVKIEVLNALVSAYCRHGKIKRAFQ 431

Query: 76  LFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD 135
           +F  +P ++++SWN++IS  + NG   + L  ++ + +    P   +L+ V    +++  
Sbjct: 432 IFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMSA 491

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           + HG++ HG +++ G    + + NAL+++YAKCG    A+ VF+ M E + +T+ A++S 
Sbjct: 492 MSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISA 551

Query: 196 LAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
            A+  R  EA+  F  M     +  D  + +SVL  C+    G+  D             
Sbjct: 552 YAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHA--GLVDD------------- 596

Query: 255 HGQQVHCLTIKL-GFEADLHLSNSLLDMYAKNGDMDSAEVIFSN--LPERSVVSWNVMIA 311
            G ++    +K+ GF   +   + ++D+  ++G +D AE +  +      S + W++  A
Sbjct: 597 -GIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKSGYFGAHSNICWSLFSA 655



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 6/119 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +ILR+G   +  L N L+ +Y+KC +   A  +FD M  +D  +WNAI+SA  +
Sbjct: 495 GKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQ 554

Query: 67  SDDLEFAYKLFDEMP-----ERNVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFVPT 119
               E A   F+ M      + +  ++ +++SA    GL +  + +++ M    GFVP+
Sbjct: 555 HGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPS 613


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 190/634 (29%), Positives = 330/634 (52%), Gaps = 56/634 (8%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEP----NEVTFTAMMSGLAKTD--RVVEALE 207
           N +  N +LS Y++ G    A  +F  +S P    + VT+T M+   A     R  +A+ 
Sbjct: 65  NAFSLNRMLSGYSRSGQLSAAHHLF--LSSPPHLRDAVTWTVMIGAFASAPGARASDAVS 122

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +FR M+R+ V+ D V++++VL +    G    + + A              +H   +KLG
Sbjct: 123 LFRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIAS-------------LHPFALKLG 169

Query: 268 F-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
              +++ + N+LLD Y K+G + +A  +F  +P R  V++N M+ G  ++    +A++L 
Sbjct: 170 LLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLF 229

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--------------------------- 359
             M+  G      T   +L      GD+  GR+                           
Sbjct: 230 AAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSSNVFVNNSLLDFYSKCD 289

Query: 360 -------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                  +F  M      S+N M++ Y+ +      ++LFREMQ           A +LS
Sbjct: 290 CLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLS 349

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
              ++  +  GKQ+HA  +      ++ V + LI +YSKC   + A+  F    +   V 
Sbjct: 350 VAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVS 409

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           W +MI G   N    EA   F  MR+  + P + +F++ + + + L+    GRQ+H+ + 
Sbjct: 410 WTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLI 469

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVR 592
           + G+++ +F GSAL++MY KCG +  A Q FD M  +N+++WN +I  YA  G    A++
Sbjct: 470 RSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIK 529

Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
           +++ M+  G KPD +TF+++L+ACSH+GL +  ++ F  M+ ++G+ P  +HY+C+ID L
Sbjct: 530 MFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTL 589

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYS 712
           GR G F + + ++ EMP +DDP+IW  +L SCR H N  LA+ AAE+LF +   ++ PY 
Sbjct: 590 GRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYV 649

Query: 713 LLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +L+NI++  G+W+D   V+++M +  + K+  YS
Sbjct: 650 ILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYS 683



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/551 (26%), Positives = 248/551 (45%), Gaps = 61/551 (11%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK-DIYSWNAILSAQCKSD 68
           L A +++ G    T+  N L+           A+ LFD+MPH+ + +S N +LS   +S 
Sbjct: 21  LDARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSG 80

Query: 69  DLEFAYKLFDEMPE--RNVVSWNNLISALVR--NGLEEKALSVYNKMSNEGFVPTHITLA 124
            L  A+ LF   P   R+ V+W  +I A           A+S++  M  EG  P  +T+A
Sbjct: 81  QLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVA 140

Query: 125 SVFKASTALLDVEHG---RRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           +V     A             H   +K+G L  N+ V N LL  Y K G    A  VF+E
Sbjct: 141 TVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQE 200

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M   + VT+ AMM G +K     EAL++F  M RK ++    + S+VL V    G     
Sbjct: 201 MPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVG----- 255

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                 D    R VHG       +     +++ ++NSLLD Y+K   +D  + +F  + E
Sbjct: 256 ------DLCLGRQVHG------LVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIE 303

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE- 359
           R  VS+NVMIAGY     ++  + L + M+S  F+   +   ++L        I  G++ 
Sbjct: 304 RDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQI 363

Query: 360 ---------------------------MFDSMPSPSVS-------SWNAMLSSYSQSENH 385
                                      M D+  +  ++       SW AM++   Q+   
Sbjct: 364 HAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQ 423

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +EA++LF  M+  G+ PDR T +  + + + + ++  G+Q+H+  +++      +  S L
Sbjct: 424 EEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSAL 483

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC   + A + F  +PE + + WN++I+  +       A   F+ M      P  
Sbjct: 484 LDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDS 543

Query: 506 FSFATVLSSCA 516
            +F +VLS+C+
Sbjct: 544 VTFLSVLSACS 554



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 203/456 (44%), Gaps = 70/456 (15%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMP--------HKDIYSWNAILSAQC 65
           +LR G+  D      ++ L      T +A  +    P        H ++   N +L A C
Sbjct: 127 MLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYC 186

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   L  A ++F EMP R+ V++N ++    + G   +AL ++  M  +G   T  T ++
Sbjct: 187 KHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFST 246

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V   +T + D+  GR+ HGLV +     N++V N+LL  Y+KC        +F EM E +
Sbjct: 247 VLTVATGVGDLCLGRQVHGLVAR-ATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERD 305

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDS-----VSLSSVLGVCAREGCGVES 240
            V++  M++G A        L +FR M  +++S D       SL SV G     G     
Sbjct: 306 NVSYNVMIAGYAWNRCASIVLRLFREM--QSLSFDRQALPYASLLSVAGSVPHIGI---- 359

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                          G+Q+H   + LG  ++  + N+L+DMY+K G +D+A+  F N  +
Sbjct: 360 ---------------GKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKND 404

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           ++ VSW  MI G  Q  Q  +A++L   M+  G  PD  T  + + A      I  GR++
Sbjct: 405 KTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQL 464

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              FD MP  +  SWNA++S+Y+     
Sbjct: 465 HSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQA 524

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           K AIK+F  M   G KPD  T   +LS+C+  G+ E
Sbjct: 525 KNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAE 560



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 199/424 (46%), Gaps = 27/424 (6%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNT---HSAQHLFDKMPHKDIYSWNA 59
           +H     L A + R GL    F  + ++ + +   +         L  +    +++  N+
Sbjct: 221 SHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSSNVFVNNS 280

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           +L    K D L+   KLF EM ER+ VS+N +I+    N      L ++ +M +  F   
Sbjct: 281 LLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQ 340

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
            +  AS+   + ++  +  G++ H  ++ +GL     V NAL+ +Y+KCG    A   F 
Sbjct: 341 ALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFI 400

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
             ++   V++TAM++G  +  +  EAL++F  M R  +S D  + SS +           
Sbjct: 401 NKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTI----------- 449

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                ++ +  +    G+Q+H   I+ G  + +   ++LLDMY K G +D A   F  +P
Sbjct: 450 -----KASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMP 504

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           ER+ +SWN +I+ Y    Q+  AI++ + M   GF+PD VT +++L AC  +G  +   +
Sbjct: 505 ERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMK 564

Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
            F+ M      SP    ++ ++ +  +     +  ++  EM F   + D    + IL SC
Sbjct: 565 YFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPF---EDDPIIWSSILHSC 621

Query: 415 AAMG 418
              G
Sbjct: 622 RTHG 625



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 174/417 (41%), Gaps = 66/417 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA ++  GL  +  + N LI++YSKC                              
Sbjct: 360 GKQIHAQLVLLGLSSEDLVGNALIDMYSKCGM---------------------------- 391

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A   F    ++  VSW  +I+  V+NG +E+AL ++  M   G  P   T +S 
Sbjct: 392 ---LDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSST 448

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KAS+ L  +  GR+ H  +I+ G   +++  +ALL +Y KCG    A+  F+EM E N 
Sbjct: 449 IKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNS 508

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
           +++ A++S  A   +   A++MF  M+      DSV+  SVL  C+  G   E    F  
Sbjct: 509 ISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFEL 568

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVV 304
            + ++  +   +   C                ++D   + G  D  + +   +P E   +
Sbjct: 569 MEYEYGISPWKEHYSC----------------VIDTLGRVGRFDKVQEMLGEMPFEDDPI 612

Query: 305 SWNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
            W+ ++     +G +  +  A E L  M S    P  + S N+     +  D    +++ 
Sbjct: 613 IWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILS-NIFAKAGKWEDAAGVKKIM 671

Query: 362 --DSMPSPSVSSW-NAMLSSYSQSENHK----------EAIKLFREMQFRGVKPDRT 405
               +   +  SW       YS S N +          E  +L++EM  +G KPD +
Sbjct: 672 RDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTS 728


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 189/563 (33%), Positives = 302/563 (53%), Gaps = 56/563 (9%)

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N   F   +  L + +R+ EAL++   + + + S+ S  + S           ++S +  
Sbjct: 38  NHKRFDEAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSC----------IKSRLLQ 87

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           Q          G++VH      GF   L + N LL+MYAK   +  ++ +F  +PER + 
Sbjct: 88  Q----------GKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLC 137

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SWN++I+GY +       + LLQ  KS                            +FD M
Sbjct: 138 SWNILISGYAK-------MGLLQEAKS----------------------------LFDKM 162

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGILESG 423
           P     SW AM+S Y + +   EA++LFR M+     K ++ T++  L++ AA+  L  G
Sbjct: 163 PERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIG 222

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           K++H   ++T    D  V S L  +Y KC   E A  +F ++ + DIV W +MI     +
Sbjct: 223 KEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQD 282

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               E F  F  + ++ + P +F+F+ VL++CA  +S   G++VH  + + G+    F  
Sbjct: 283 GRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAA 342

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           SAL+ MY KCG++  A + F      +  +W  +I GYAQNG  DEA+R ++ ++ SG +
Sbjct: 343 SALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQ 402

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           PD ITFV +L+AC+H+GLVD G++ F+S++  +G+    DHY C+ID L R+G F EAE 
Sbjct: 403 PDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAEN 462

Query: 664 LIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGR 723
           +I +M  K D  +W  LL  CR+H N++LA+RAAE LF ++P+N A Y  LANIY++ G 
Sbjct: 463 IISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGM 522

Query: 724 WDDLRAVRELMSENCIVKDPAYS 746
           W ++  +R+ M +  +VK P  S
Sbjct: 523 WSEVAKIRKTMDDRGVVKKPGLS 545



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 225/429 (52%), Gaps = 25/429 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H HI  +G     F+ NRL+E+Y+KC++   +Q LFD+MP +D+ SWN ++S   K
Sbjct: 89  GKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAK 148

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITLAS 125
              L+ A  LFD+MPER+  SW  +IS  VR+    +AL ++  M  ++       T++S
Sbjct: 149 MGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSS 208

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A+ A+  +  G+  HG +++ GLD +  V +AL  +Y KCG  + A  +F++M + +
Sbjct: 209 ALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRD 268

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+TAM+    +  R  E  ++F  ++R  +  +  + S VL  CA             
Sbjct: 269 IVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACA------------- 315

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
             N+ S  + G++VH    ++GF+     +++L+ MY+K G+M SAE +F   P+  + S
Sbjct: 316 --NQTSEEL-GKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFS 372

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  +IAGY Q  Q  +AI   + +   G +PD +T + +L AC  +G +  G + F S+ 
Sbjct: 373 WTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIK 432

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                + +   +  ++   ++S    EA  +  +M    +KPD+   A +L  C   G L
Sbjct: 433 EQYGLTHTADHYACIIDLLARSGQFDEAENIISKM---SMKPDKFLWASLLGGCRIHGNL 489

Query: 421 ESGKQVHAA 429
           +  ++   A
Sbjct: 490 KLAQRAAEA 498



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 178/423 (42%), Gaps = 97/423 (22%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC--------------------------- 168
           ++ G++ H  +   G    +++ N LL +YAKC                           
Sbjct: 86  LQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISG 145

Query: 169 ----GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR------KAVS 218
               G  + A  +F++M E +  ++TAM+SG  + DR  EALE+FR+M R         +
Sbjct: 146 YAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFT 205

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
           + S   ++    C R                      G+++H   ++ G ++D  + ++L
Sbjct: 206 VSSALAAAAAVPCLRI---------------------GKEIHGYIMRTGLDSDEVVWSAL 244

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
            DMY K G ++ A  IF  + +R +V+W  MI  Y Q  +  +  +L   +   G  P+E
Sbjct: 245 SDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNE 304

Query: 339 VTSINMLVACV-----------------------------------RSGDIKTGREMFDS 363
            T   +L AC                                    + G++ +   +F  
Sbjct: 305 FTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKE 364

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            P P + SW ++++ Y+Q+    EAI+ F  +   G +PD  T   +LS+CA  G+++ G
Sbjct: 365 TPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKG 424

Query: 424 -KQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGL 480
               H+   +   +H  ++ A  +I + ++  + + AE +  ++  + D   W S++ G 
Sbjct: 425 LDYFHSIKEQYGLTHTADHYAC-IIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGC 483

Query: 481 SLN 483
            ++
Sbjct: 484 RIH 486


>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 214/717 (29%), Positives = 363/717 (50%), Gaps = 75/717 (10%)

Query: 74  YKLFDEMPERNVVSWNN-LISALVRNGLEEKALSVYNKMSNEGF--VPTHITLASVFKAS 130
           + LFD+ P  N  S+N  L++ L R+G   ++L  +      G        TL    KA 
Sbjct: 27  HNLFDQSPPPNAASFNRVLLNYLPRDG-AFQSLRFFKNNFRWGLDGNADEFTLVLALKAC 85

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
                +  GR+ HG VI  G   +I V+N+L+++Y K G  + A  VF+ + +P+ V++ 
Sbjct: 86  CGFPKL--GRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWN 143

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
            ++SG  K++    AL     M    V  DSV+ ++ L  C      ++ + F       
Sbjct: 144 TILSGFEKSEN---ALSFALRMNLNGVKFDSVTYTTALSFC------LDGEEF------- 187

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
              + G Q+H L +K GF+ D+ + N+L+ MY++   +  A  +F  +P R  VSW+ MI
Sbjct: 188 ---LFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMI 244

Query: 311 AGYGQKYQS-TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD-----------IKTGR 358
            GY Q+  +  +AI +  +M   G + D V     L  C    +           +KTG 
Sbjct: 245 TGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGH 304

Query: 359 E------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           E                        +F+ +   +V SW  M+S Y +      A+ LF +
Sbjct: 305 ETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEG-----AVSLFNK 359

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+  GV P+  T   +L +     ++E G  VH   +K     +  V + LI +Y+K + 
Sbjct: 360 MRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEF 419

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSL---DIEAFMFFKQMRQNEMYPTQFSFATV 511
            + A RVF  +P  +I+ WN++I+G + N+L    +EAF++       E  P +++F +V
Sbjct: 420 MQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAIM----EYKPNEYTFGSV 475

Query: 512 LS--SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           L+  S  +  S   G++ H+ + K G   D  +  AL++MY K G I  +++ F+    +
Sbjct: 476 LNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQ 535

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           +   W  +I GYAQ+G  +  ++L+++M    +KPD + F+++LTACS + +VD+G + F
Sbjct: 536 SQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFF 595

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           N M  DH +EP  +HY+CM+D LGRAG   EAE ++  +P        + LL +CR H N
Sbjct: 596 NMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHGN 655

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           V +A+R A +L + +P  S PY L++N+Y+  G W+ +  VR+ M E  ++K+  +S
Sbjct: 656 VEMAERIANDLMKKEPLESGPYVLMSNLYAQKGDWEKVAKVRKEMRERGVMKEIGFS 712



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 255/518 (49%), Gaps = 69/518 (13%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N++++  CKS  LE A+ +F  + + ++VSWN ++S   ++   E ALS   +M+  G  
Sbjct: 112 NSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKS---ENALSFALRMNLNGVK 168

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
              +T  +         +   G + H L +K G   +++V NAL+++Y++      A  V
Sbjct: 169 FDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKV 228

Query: 178 FEEMSEPNEVTFTAMMSGLAKT-DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           F+EM   + V+++AM++G A+  D  ++A+ +F  M+R+ V  D+V ++  L VC  E  
Sbjct: 229 FDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHE-- 286

Query: 237 GVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                          RN+  G+Q+HCL +K G E    + N L+  Y+K   ++ A+ +F
Sbjct: 287 ---------------RNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVF 331

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-------- 347
             + +R+V+SW  MI+ Y +      A+ L  +M+  G  P++VT I +L A        
Sbjct: 332 ELINDRNVISWTTMISLYEE-----GAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVE 386

Query: 348 --------CVRS---GDIKTGREM----------------FDSMPSPSVSSWNAMLSSYS 380
                   C+++    ++  G  +                F  +P   + SWNA++S Y+
Sbjct: 387 QGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYA 446

Query: 381 QSENHKEAIK--LFREMQFRGVKPDRTTLAIILSSCAAMG--ILESGKQVHAASLKTASH 436
           Q+   +EA++  L+  M++   KP+  T   +L++ +A     L+ G++ H+  +K   +
Sbjct: 447 QNALCQEALEAFLYAIMEY---KPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLN 503

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
           +D  ++  L+ +Y+K    + ++RVF+   +     W ++I+G + +         F++M
Sbjct: 504 VDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEM 563

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
            +  + P    F +VL++C++      GRQ    + KD
Sbjct: 564 EKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKD 601



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 211/492 (42%), Gaps = 91/492 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH   L+ G   D F+ N L+ +YS+  +   A+ +FD+MP +D  SW+A+++   +
Sbjct: 190 GWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQ 249

Query: 67  SDD------LEFAYKL-----FDEMP----------ERNV-------------------V 86
             D      L F   +     FD +P          ERN+                    
Sbjct: 250 EGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTS 309

Query: 87  SWNNLISALVRNGLEEKALSV--------------------------YNKMSNEGFVPTH 120
             N LIS   +  + E A +V                          +NKM  +G  P  
Sbjct: 310 VGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMRLDGVYPND 369

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           +T   +  A T    VE G   HGL IK      + V N+L+++YAK  + + A  VF E
Sbjct: 370 VTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIE 429

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVE 239
           +     +++ A++SG A+     EALE F   I +    +  +  SVL  + A E   ++
Sbjct: 430 LPYREIISWNALISGYAQNALCQEALEAFLYAIME-YKPNEYTFGSVLNAISAGEDISLK 488

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                          HGQ+ H   IK+G   D  +S +LLDMYAK G +  ++ +F+   
Sbjct: 489 ---------------HGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETS 533

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           ++S  +W  +I+GY Q       I+L + M+    +PD V  +++L AC R+  +  GR+
Sbjct: 534 KQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQ 593

Query: 360 MF-----DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
            F     D M  P    ++ M+    ++   +EA ++   +      P  + L  +L +C
Sbjct: 594 FFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIP---GGPGVSALQSLLGAC 650

Query: 415 AAMGILESGKQV 426
              G +E  +++
Sbjct: 651 RTHGNVEMAERI 662


>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
          Length = 1007

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 212/659 (32%), Positives = 328/659 (49%), Gaps = 57/659 (8%)

Query: 103 KALSVYNKMSNEGFVPTHITLA-SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANAL 161
           +A S Y++M   G   T  TL  S+ KA ++L  V HG+  H  ++K G D      N+ 
Sbjct: 32  EACSRYHQMKKAGAQLTDPTLVHSILKACSSL-PVRHGKSIHASLLKQGFDSLTSTGNSX 90

Query: 162 LSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDS 221
              Y K G    A+ VF+ M   + V++  M+ G          L  FR     A   + 
Sbjct: 91  XDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNV 150

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDM 281
            +L   +  C   G   E                G ++H   I+ GF     + NSLL M
Sbjct: 151 STLVLAIHACRSLGAMEE----------------GLKMHGYIIRSGFLDIPSVQNSLLSM 194

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVT 340
           YA N DM+ AE +F  + ER V+SW+VMI GY Q  ++  A++L   M S    E D +T
Sbjct: 195 YADN-DMERAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGIT 253

Query: 341 SINMLVACVRSGDIKTGREM-----------------------------------FDSMP 365
            +++L AC  +GDI  GR +                                   F+ MP
Sbjct: 254 MVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAFNEMP 313

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
             +  SWN+++S   ++E H EA+ LF  M   G + D  TL  +L SC         K 
Sbjct: 314 CRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF 373

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +H+  ++    ++ +V + LI  YSKC   ELA ++F R+   D V W++MIAG +    
Sbjct: 374 IHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGK 433

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             EA   F++M Q +  P   +  ++L + +  +   + +  H    + G   ++ VG+A
Sbjct: 434 PDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTA 493

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           +++MY KCG+I  +R+ FD +  KN V+W  MI     NG   +A+ L  +M   G+KP+
Sbjct: 494 ILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPN 553

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            +T +++L+ACSH GLV+ G+  F +M  DHGVEP L+HY+CM+D L RAG  + A  LI
Sbjct: 554 XVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLI 613

Query: 666 DEMP--CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
           ++MP   +D   +W  LLS+CR   N RL   AA  +  L+P++SA Y L +++Y++ G
Sbjct: 614 EKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAXRVLXLEPQSSAGYFLASSMYAASG 672



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/538 (27%), Positives = 252/538 (46%), Gaps = 54/538 (10%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K+  L+ A  +FD M  R+ VSWN +I   +  G  +  L  + +     F P   TL  
Sbjct: 96  KTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVL 155

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A  +L  +E G + HG +I+ G      V N+LLS+YA     + A  +F+EM E +
Sbjct: 156 AIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEMCERD 214

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFA 244
            ++++ M+ G  +T     AL++F  M   A + +D +++ SVL  CA  G         
Sbjct: 215 VISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTG--------- 265

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
             D    R+VHG     + I  G + DL + NS++DMY+K  D +SA   F+ +P R+ V
Sbjct: 266 --DISMGRSVHG-----VVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAFNEMPCRNTV 318

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGD 353
           SWN +I+G  +  + ++A+ L   M   GF  DEVT +N+L +C           + S  
Sbjct: 319 SWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIV 378

Query: 354 IKTGRE------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
           I+ G E                        +FD + +    SW+AM++ ++      EAI
Sbjct: 379 IRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAI 438

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF+EM     KP+  T+  +L + +    L+  K  H   ++     +  V + ++ +Y
Sbjct: 439 ALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMY 498

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC    L+ + F +IPE +IV W +MIA   +N L  +A     +M+ + + P   +  
Sbjct: 499 AKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTL 558

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +VLS+C+      +G      + +D G    +   S +++M  + G +  A    + M
Sbjct: 559 SVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLIEKM 616



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 213/453 (47%), Gaps = 84/453 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H +I+R+G  D   + N L+ +Y+                                
Sbjct: 169 GLKMHGYIIRSGFLDIPSVQNSLLSMYA-------------------------------- 196

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLAS 125
            +D+E A +LFDEM ER+V+SW+ +I   V+ G    AL ++ +M SN       IT+ S
Sbjct: 197 DNDMERAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGITMVS 256

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA     D+  GR  HG+VI  GLD +++V N+++ +Y+K    + A   F EM   N
Sbjct: 257 VLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAFNEMPCRN 316

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ +++SGL +T++  EAL +F  M +     D V+L ++L                Q
Sbjct: 317 TVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLL----------------Q 360

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S   F      + +H + I+ G+E +  + NSL+D Y+K   ++ A  +F  L  +  VS
Sbjct: 361 SCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVS 420

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT--------- 356
           W+ MIAG+    +  +AI L Q M     +P+ VT +++L A   S D+K          
Sbjct: 421 WSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXI 480

Query: 357 --------------------------GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                      R+ FD +P  ++ SW AM+++   +   ++A+ 
Sbjct: 481 RRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALA 540

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           L  EM+  G+KP+  T   +LS+C+  G++E G
Sbjct: 541 LLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEG 573



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 211/415 (50%), Gaps = 30/415 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D++  N+I+    K DD E A+K F+EMP RN VSWN++IS LVR     +ALS++  M 
Sbjct: 285 DLFVGNSIIDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMG 344

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             GF    +TL ++ ++    +D    +  H +VI+ G + N +V N+L+  Y+KC   +
Sbjct: 345 KAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIE 404

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +F+ +   + V+++AM++G     +  EA+ +F+ M +     + V++ S+L    
Sbjct: 405 LAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLL---- 460

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
            E   V +D+      K S+  HG     + I+ G  A++ +  ++LDMYAK G++  + 
Sbjct: 461 -EAFSVSADL------KRSKWAHG-----IXIRRGLAAEVAVGTAILDMYAKCGEIGLSR 508

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
             F  +PE+++VSW  MIA  G    +  A+ LL  MK  G +P+ VT++++L AC   G
Sbjct: 509 KAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGG 568

Query: 353 DIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
            ++ G   F++M       P +  ++ M+    ++     A+ L  +M  R ++      
Sbjct: 569 LVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLIEKMPER-MRDGAGLW 627

Query: 408 AIILSSCAAMG--ILESGKQVHAASLKTASHI------DNYVASGLIGIYSKCQR 454
             +LS+C + G   L +G       L+  S          Y ASGL+ +  K  R
Sbjct: 628 GALLSACRSSGNSRLGAGAAXRVLXLEPQSSAGYFLASSMYAASGLVHVEDKAWR 682



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 128/294 (43%), Gaps = 46/294 (15%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H+ ++R G   + F+ N LI+ YSKC+    A  LFD++  KD  SW+A        
Sbjct: 372 KFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSA-------- 423

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                                  +I+     G  ++A++++ +M+     P  +T+ S+ 
Sbjct: 424 -----------------------MIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLL 460

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           +A +   D++  +  HG+ I+ GL   + V  A+L +YAKCG    +   F+++ E N V
Sbjct: 461 EAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIV 520

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++ AM++         +AL +   M    +  + V+  SVL  C+  G   E   F    
Sbjct: 521 SWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSF---- 576

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
             F   V            G E  L   + ++DM  + G ++ A  +   +PER
Sbjct: 577 --FENMVQDH---------GVEPGLEHYSCMVDMLXRAGKLNXAMNLIEKMPER 619


>gi|356495279|ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Glycine max]
          Length = 944

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 220/786 (27%), Positives = 378/786 (48%), Gaps = 102/786 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   +++G+  D  L N L+++Y+KC +                     + S++C 
Sbjct: 211 GRAIHCVSIKSGMLVDISLGNALVDMYAKCGD---------------------LSSSEC- 248

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    L++E+  ++ VSWN+++   + N   EKAL  + +MS       +++L   
Sbjct: 249 ---------LYEEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEETADNVSLCCA 299

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             AS++L ++  G+  HGL IK+G   ++ VAN+L+SLY++C   K A  +F E++  + 
Sbjct: 300 ISASSSLGELSFGQSVHGLGIKLGYKSHVSVANSLISLYSQCEDIKAAETLFREIALKDI 359

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCA-----REGCGVES 240
           V++ AMM G A   ++ E  ++   M +      D V+L ++L +CA     REG     
Sbjct: 360 VSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREG----- 414

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                      R +HG  +     +      + L NSL+ MY+K   ++ AE++F++  E
Sbjct: 415 -----------RTIHGYAIR----RQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAE 459

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------ 348
           +  VSWN MI+GY     S +A  L   M   G      T   +L +C            
Sbjct: 460 KDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINSIHFGK 519

Query: 349 -------------------------VRSGDIKTGREMF-DSMPSPSVSSWNAMLSSYSQS 382
                                    +  GD+     +  ++     ++SWN ++    + 
Sbjct: 520 SVHCWQLKSGFLNHILLINILMHMYINCGDLTASFSILHENSALADIASWNTLIVGCVRC 579

Query: 383 ENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           ++ +EA++ F  M Q   +  D  TL   LS+CA + +   GK +H  ++K+    D  V
Sbjct: 580 DHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRV 639

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + LI +Y +C+    A+ VF      ++  WN MI+ LS N    EA   F  +   + 
Sbjct: 640 QNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALELFLNL---QF 696

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P + +   VLS+C ++     G+QVHA + +    ++ F+ +ALI++Y  CG +  A Q
Sbjct: 697 EPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYSNCGRLDTALQ 756

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F     K+   WN MI  Y  +G G++A++L+ +M  SG +    TFV++L+ACSHSGL
Sbjct: 757 VFRHAKEKSESAWNSMISAYGYHGKGEKAIKLFHEMCESGARVSKSTFVSLLSACSHSGL 816

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           V+ G+  +  M   +GV+P  +H   ++D LGR+G   EA          D   +W  LL
Sbjct: 817 VNQGLWFYECMLERYGVQPETEHQVYVVDMLGRSGRLDEAYEFAKGC---DSSGVWGALL 873

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           S+C  H  ++L K+ A+ LF+L+P+N   Y  L+N+Y + G W D   +R+ + +  + K
Sbjct: 874 SACNYHGELKLGKKIAQYLFQLEPQNVGHYISLSNMYVAAGSWKDATELRQSIQDLGLRK 933

Query: 742 DPAYSL 747
              YSL
Sbjct: 934 TAGYSL 939



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 173/616 (28%), Positives = 289/616 (46%), Gaps = 68/616 (11%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEG 115
            ++L+   K+ D   +  LFDE+  R+ ++WN +++A + N     A+  ++KM  +  G
Sbjct: 130 TSLLTIYSKAGDFTSSKGLFDEIQNRDAIAWNAIVAASLENKCYRIAMDFFDKMIKAQTG 189

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
           F  T  TL  +  AS  + + + GR  H + IK G+  +I + NAL+ +YAKCG    + 
Sbjct: 190 FDST--TLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSE 247

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            ++EE+   + V++ ++M G        +AL  F+ M     + D+VSL   +   +  G
Sbjct: 248 CLYEEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEETADNVSLCCAISASSSLG 307

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                      +  F     GQ VH L IKLG+++ + ++NSL+ +Y++  D+ +AE +F
Sbjct: 308 -----------ELSF-----GQSVHGLGIKLGYKSHVSVANSLISLYSQCEDIKAAETLF 351

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDI 354
             +  + +VSWN M+ G+    +  +  +LL +M+  G F+PD VT I +L  C      
Sbjct: 352 REIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLS 411

Query: 355 KTGRE------------------------------------MFDSMPSPSVSSWNAMLSS 378
           + GR                                     +F+S       SWNAM+S 
Sbjct: 412 REGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSWNAMISG 471

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI--LESGKQVHAASLKTASH 436
           YS +   +EA  LF EM   G     +T+  ILSSC ++ I  +  GK VH   LK+   
Sbjct: 472 YSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINSIHFGKSVHCWQLKSGFL 531

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
               + + L+ +Y  C     +  + H    L DI  WN++I G        EA   F  
Sbjct: 532 NHILLINILMHMYINCGDLTASFSILHENSALADIASWNTLIVGCVRCDHFREALETFNL 591

Query: 496 MRQNEMYPTQF---SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           MRQ    P  +   +  + LS+CA L     G+ +H    K    +D  V ++LI MY +
Sbjct: 592 MRQEP--PLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDR 649

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           C DI  A+  F      N  +WN MI   + N    EA+ L+ ++     +P++IT + +
Sbjct: 650 CRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALELFLNL---QFEPNEITIIGV 706

Query: 613 LTACSHSGLVDVGVEI 628
           L+AC+  G++  G ++
Sbjct: 707 LSACTQIGVLRHGKQV 722



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 178/726 (24%), Positives = 304/726 (41%), Gaps = 123/726 (16%)

Query: 75  KLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALL 134
           +LFDEMP+R +            +G E                  H  L    K      
Sbjct: 75  QLFDEMPQRYI------------HGRE-----------------IHFELVDYIKLCLKKP 105

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
            +      H   +KIG   ++  + +LL++Y+K G    +  +F+E+   + + + A+++
Sbjct: 106 KIVTATVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFDEIQNRDAIAWNAIVA 165

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
              +      A++ F  MI+     DS +L  ++         +    F Q         
Sbjct: 166 ASLENKCYRIAMDFFDKMIKAQTGFDSTTLLLIVSA------SLHMKNFDQ--------- 210

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+ +HC++IK G   D+ L N+L+DMYAK GD+ S+E ++  +  +  VSWN ++ G  
Sbjct: 211 -GRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSL 269

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG---------------------- 352
                 KA+   +RM       D V+    + A    G                      
Sbjct: 270 YNRHPEKALCYFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVS 329

Query: 353 -------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                        DIK    +F  +    + SWNAM+  ++ +   KE   L  +MQ  G
Sbjct: 330 VANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVG 389

Query: 400 -VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNEL 457
             +PD  TL  +L  CA + +   G+ +H  +++     D+  + + LIG+YSKC   E 
Sbjct: 390 FFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEK 449

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           AE +F+   E D V WN+MI+G S N    EA   F +M +     +  +   +LSSC  
Sbjct: 450 AELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNS 509

Query: 518 L--SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV--- 572
           L  +S   G+ VH    K G++N I + + L+ MY  CGD+  +   F ++H  + +   
Sbjct: 510 LNINSIHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDLTAS---FSILHENSALADI 566

Query: 573 -TWNEMIHGYAQNGYGDEAVRLYKDMIAS-GVKPDDITFVAILTACSHSGLVDV-----G 625
            +WN +I G  +  +  EA+  +  M     +  D IT V+ L+AC++  L ++     G
Sbjct: 567 ASWNTLIVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHG 626

Query: 626 VEIFNSMQLDHGVE-------------------------PILDHYTCMIDCLGRAGHFHE 660
           + + + +  D  V+                         P L  + CMI  L       E
Sbjct: 627 LTVKSPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESRE 686

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK-NSAPYSLLANIYS 719
           A  L   +  + + +    +LS+C     +R  K+    +FR   + NS   + L ++YS
Sbjct: 687 ALELFLNLQFEPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYS 746

Query: 720 SLGRWD 725
           + GR D
Sbjct: 747 NCGRLD 752



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 135/295 (45%), Gaps = 4/295 (1%)

Query: 389 IKLFREMQFRGVKPDRTTLAII--LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           I+LF EM  R +        ++  +  C     + +    H A+LK  +      ++ L+
Sbjct: 74  IQLFDEMPQRYIHGREIHFELVDYIKLCLKKPKIVTATVAHCAALKIGALAHLPTSTSLL 133

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            IYSK      ++ +F  I   D + WN+++A    N     A  FF +M + +      
Sbjct: 134 TIYSKAGDFTSSKGLFDEIQNRDAIAWNAIVAASLENKCYRIAMDFFDKMIKAQTGFDST 193

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +   ++S+   + +  QGR +H    K G + DI +G+AL++MY KCGD+  +   ++ +
Sbjct: 194 TLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEI 253

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             K+ V+WN ++ G   N + ++A+  +K M  S    D+++    ++A S  G +  G 
Sbjct: 254 ECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEETADNVSLCCAISASSSLGELSFGQ 313

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            + + + +  G +  +     +I    +      AE L  E+  K D V W  ++
Sbjct: 314 SV-HGLGIKLGYKSHVSVANSLISLYSQCEDIKAAETLFREIALK-DIVSWNAMM 366


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 205/643 (31%), Positives = 324/643 (50%), Gaps = 56/643 (8%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H L +K+G   ++Y  N +L+ Y KC   + A  +F+EM   + V++  M++G      +
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHC 261
             + ++ R M      +D  +  S+L   A                 F+   H GQQVH 
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIA-----------------FAGMFHLGQQVHS 123

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
           + IK+G+  +++  ++LLDMYAK   ++ A + F ++ + + VSWN MI GY Q      
Sbjct: 124 IIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRET 183

Query: 322 AIELLQRMKSCGFEPDEVTSINM-----------LVACVRSGDIKTGREMFDSMPSPSVS 370
           A  LL  M+  G + D+ T   +           L + +    IK G E+ ++M +  ++
Sbjct: 184 AFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALIT 243

Query: 371 S-------------------------WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           S                         WN++L++Y        A KL  +MQ  G +PD  
Sbjct: 244 SYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLY 303

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER--VFH 463
           +   I+S+C    I  +G+ +H   +K        +++ LI +Y K     + E   +F 
Sbjct: 304 SYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFE 363

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            +   D V WNS++ GLS      +A   F  MR   M    +SF+ VL SC+ L++   
Sbjct: 364 SLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQL 423

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           G+Q+H    K G  ++ FV S+LI MY KCG I  AR+ F+     +++TWN ++ GYAQ
Sbjct: 424 GQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQ 483

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
           +G  + A+ L+  M    VK D ITFVA+LTACSH GLV+ G +    M+ D+GV P ++
Sbjct: 484 HGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRME 543

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
           HY C +D  GR+G   EA+ LI+EMP K D  +W+  L +CR   N+ LA + A  L  +
Sbjct: 544 HYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEM 603

Query: 704 DPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +P+    Y LL+N+Y +L RWD+   V+ LM E  + K P +S
Sbjct: 604 EPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWS 646



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 159/615 (25%), Positives = 271/615 (44%), Gaps = 89/615 (14%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y+ N IL+   K  +L  A  LFDEMP R+ VSWN +I+  +  G  E +  V   M 
Sbjct: 32  DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMR 91

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           + GF     T  S+ K          G++ H ++IK+G  +N+Y  +ALL +YAKC   +
Sbjct: 92  SCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE 151

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC- 231
            A   F  +S+ N V++ AM++G A+      A  +   M ++   +D  + + +L +  
Sbjct: 152 DAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLD 211

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
             + C + S                 Q+H   IK G E    + N+L+  Y+K G +D A
Sbjct: 212 DADFCNLTS-----------------QLHGKIIKHGLELVNTMCNALITSYSKCGSLDDA 254

Query: 292 EVIF-SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           + IF S+   R +V+WN ++A Y  + Q   A +LL  M+  GFEPD  +  +++ AC  
Sbjct: 255 KRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFN 314

Query: 351 SGDIKTGREM-------------------------------------FDSMPSPSVSSWN 373
                 GR +                                     F+S+      SWN
Sbjct: 315 ENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWN 374

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           ++L+  SQ+ + ++A+K F  M+   +  D  + + +L SC+ +   + G+Q+H  +LK 
Sbjct: 375 SILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKY 434

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               + +V+S LI +YSKC   E A R F    +   + WN+++ G + +     A   F
Sbjct: 435 GLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLF 494

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
             M   ++     +F  VL++C+ +    QG +    +E D  V         +E Y   
Sbjct: 495 FLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGV------PPRMEHYACA 548

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
            D+YG                        ++G  +EA  L ++M     KPD   +   L
Sbjct: 549 VDLYG------------------------RSGRLEEAKALIEEM---PFKPDTTVWKTFL 581

Query: 614 TACSHSGLVDVGVEI 628
            AC   G +++  ++
Sbjct: 582 GACRSCGNIELACQV 596



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 209/448 (46%), Gaps = 60/448 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH  I+++GL     +CN LI  YSKC +                               
Sbjct: 222 LHGKIIKHGLELVNTMCNALITSYSKCGS------------------------------- 250

Query: 70  LEFAYKLFDEMPE-RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
           L+ A ++FD     R++V+WN+L++A +    E+ A  +   M   GF P   +  S+  
Sbjct: 251 LDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIIS 310

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC--GWTKHAVPVFEEMSEPNE 186
           A        +GR  HGLVIK G ++++ ++NAL+S+Y K   G  K A+ +FE +   + 
Sbjct: 311 ACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDR 370

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ ++++GL++T    +A++ F  M   A+ ID  S S+VL  C+              
Sbjct: 371 VSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCS-------------- 416

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    GQQ+H L +K G E++  +S+SL+ MY+K G ++ A   F    + S ++W
Sbjct: 417 --DLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITW 474

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N ++ GY Q  Q   A++L   M+    + D +T + +L AC   G ++ G +    M S
Sbjct: 475 NALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMES 534

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +   +  Y +S   +EA  L  EM F   KPD T     L +C + G +E
Sbjct: 535 DYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPF---KPDTTVWKTFLGACRSCGNIE 591

Query: 422 SGKQV--HAASLKTASHIDNYVASGLIG 447
              QV  H   ++   H    + S + G
Sbjct: 592 LACQVAGHLLEMEPEEHCTYVLLSNMYG 619



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 85/221 (38%), Gaps = 15/221 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   L+ GL  + F+ + LI +YSKC     A+  F++       +WNA++    +
Sbjct: 424 GQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQ 483

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT--- 119
                 A  LF  M  + V    +++  +++A    GL E+       M ++  VP    
Sbjct: 484 HGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRME 543

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV-- 177
           H   A      +  L+         L+ ++    +  V    L     CG  + A  V  
Sbjct: 544 HYACAVDLYGRSGRLE-----EAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAG 598

Query: 178 -FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
              EM      T+  + +      R  E  ++ RLM  + V
Sbjct: 599 HLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGV 639


>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 201/666 (30%), Positives = 333/666 (50%), Gaps = 50/666 (7%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           PT ++ A    A++  + +  G + H  +IK+G   +I+  N L+ +Y KCG+    + V
Sbjct: 76  PTALSTALTHSANSKCILL--GSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKV 133

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-EGC 236
           F EM   N V++T ++SG  +       L ++  MIR  +  +  +L  V   CA   GC
Sbjct: 134 FGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGC 193

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
            V  ++       F R +HG  +     ++GF   +   NSL+DMY KNG    A  +F 
Sbjct: 194 LVVGNL------NFGRQIHGLIIQS---EVGFSTAVM--NSLMDMYFKNGGGLYALKVFD 242

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            L ++ ++SWN + AG  Q   + +      ++   G +P+ VT   +   C  + D+ +
Sbjct: 243 RLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVS 302

Query: 357 GRE-----------------------------------MFDSMPSPSVSSWNAMLSSYSQ 381
           G +                                   +FDS P  S+ + N M+S Y+ 
Sbjct: 303 GLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNL 362

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           + ++ EA+ LF  +   G++ D  T +  L +C      + G+Q+H   +K+      YV
Sbjct: 363 NCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYV 422

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            S L+  Y      + +   F+ +  LD+V W +MI+ L       EA     ++++   
Sbjct: 423 CSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGG 482

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P +F F ++ + CA +++  Q + VH+ + K GY   +FV SA+I+ Y KCGDI  AR+
Sbjct: 483 KPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARR 542

Query: 562 FFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
            FD     ++ + +N M+  YA +G   EAV  ++ M  + ++P   TFV++++ACSH G
Sbjct: 543 VFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLG 602

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           LV+ G   F SM LD+G++P  D+Y C++D   R G   +A+ +I+ MP    P IW  L
Sbjct: 603 LVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSL 662

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           L+ CR+H N  L + AA++L +L P+N A Y LL+ +YS  G W D   VR+ M E  + 
Sbjct: 663 LNGCRIHGNKELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLW 722

Query: 741 KDPAYS 746
           KDP  S
Sbjct: 723 KDPGCS 728



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 254/565 (44%), Gaps = 89/565 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K  + G  +HA I++ G  +D F  N LI +Y+KC                         
Sbjct: 90  KCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGF----------------------- 126

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   L    K+F EMP +N+VSW  ++S  V+NG  E  L VY +M   G VP   
Sbjct: 127 --------LAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEF 178

Query: 122 TLASVFKASTAL------LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
            L  V KA  AL       ++  GR+ HGL+I+  +  +  V N+L+ +Y K G   +A+
Sbjct: 179 ALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYAL 238

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            VF+ + + + +++  + +GL++ D   E    F  ++   +  + V+ S +        
Sbjct: 239 KVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILF-----RF 293

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
           CG   D+           V G Q HCL  + G   +  +++SL++M+++ G M  A ++F
Sbjct: 294 CGEALDL-----------VSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVF 342

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
            + P +S+ + N MI+GY     + +A+ L   +   G E DE T  + L AC R+ + K
Sbjct: 343 DSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQK 402

Query: 356 TGREM-----------------------------------FDSMPSPSVSSWNAMLSSYS 380
            GR+M                                   F+ +    + SW AM+S+  
Sbjct: 403 LGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALV 462

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
                 EAI L   ++  G KPD      I + CA +      K VH+  +K       +
Sbjct: 463 HKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVF 522

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           VAS +I  Y+KC   E A RVF +     D++ +N+M+   + + L  EA   F++M+  
Sbjct: 523 VASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLA 582

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQG 524
            + P+Q +F +V+S+C+ L    QG
Sbjct: 583 TLEPSQATFVSVISACSHLGLVEQG 607



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 128/294 (43%), Gaps = 47/294 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  I+++G     ++C+ L++ Y           L D                   
Sbjct: 404 GRQMHGTIVKSGFASQGYVCSSLLKCYV-------GFGLLD------------------- 437

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D  EF    F+ +   ++VSW  +ISALV  G   +A+ + N++   G  P      S+
Sbjct: 438 -DSFEF----FNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSI 492

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F     +      +  H LV+K+G + +++VA+A++  YAKCG  ++A  VF++ S   +
Sbjct: 493 FNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRD 552

Query: 187 VT-FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           V  F  M+   A    V EA+E F  M    +     +  SV+  C+  G   + D+F +
Sbjct: 553 VILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFK 612

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           S N               +  G +        L+D++++NG ++ A+ I   +P
Sbjct: 613 SMN---------------LDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMP 651



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 7/277 (2%)

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           + D T L+  L+  A    +  G Q+HA  +K     D +  + LI +Y+KC       +
Sbjct: 73  RNDPTALSTALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLK 132

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           VF  +P  ++V W  +++G   N         + +M +  + P +F+   V  +CA L  
Sbjct: 133 VFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGG 192

Query: 521 SFQ------GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
                    GRQ+H  I +        V ++L++MY K G    A + FD +  K+ ++W
Sbjct: 193 CLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISW 252

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +  G +Q     E  R +  ++ +G+KP+ +TF  +   C  +  +  G++ F+ +  
Sbjct: 253 NTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQ-FHCLAF 311

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
             G+       + +I+   R G    A ++ D  P K
Sbjct: 312 RFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFK 348


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 188/609 (30%), Positives = 311/609 (51%), Gaps = 57/609 (9%)

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y KCG    A+ VF  +  PN V++T +++  A+     EAL  +R M+ + +  D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMY 282
               +GVC+           +  D K      GQ +H + ++    E D+ L  +L+ MY
Sbjct: 61  FVVAIGVCS-----------SSKDLK-----QGQLLHAMILETRLLEFDIILGTALITMY 104

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC---GFEPDEV 339
           A+  D++ A   F  + ++++V+WN +IAGY +      A+++ Q M S    G +PD +
Sbjct: 105 ARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAI 164

Query: 340 TSINMLVACVRSGDIKTGREM-----------------------------------FDSM 364
           T  + L AC   GDI  GRE+                                   FD +
Sbjct: 165 TFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
            +  V +WN M+S Y++     +A++LF+ M     KP+  T   +L++C  +  LE G+
Sbjct: 225 KNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGR 284

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRN-ELAERVFHRIPELDIVCWNSMIAGLSLN 483
            +H    +     D  + + L+ +Y+KC  + E A +VF R+   D++ WN +I      
Sbjct: 285 AIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQY 344

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               +A   FKQM+   + P + + + VLS+CA L +  QG+ VHA I       D+ + 
Sbjct: 345 GQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLE 404

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           ++L+ MY +CG +      F  +  K+ V+W+ +I  YAQ+G+    +  + +++  G+ 
Sbjct: 405 NSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLA 464

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
            DD+T V+ L+ACSH G++  GV+ F SM  DHG+ P   H+ CM+D L RAG    AE 
Sbjct: 465 ADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAEN 524

Query: 664 LIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS-APYSLLANIYSSLG 722
           LI +MP   D V W  LLS C+LH + + A R A++LF L+ ++  +  +LL+N+Y+  G
Sbjct: 525 LIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAG 584

Query: 723 RWDDLRAVR 731
           RWDD+R  R
Sbjct: 585 RWDDVRKTR 593



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 259/550 (47%), Gaps = 58/550 (10%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A  +F  +   N VSW  +++A  RNG   +AL  Y +M  EG  P            ++
Sbjct: 11  ALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSS 70

Query: 133 LLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
             D++ G+  H ++++  L + +I +  AL+++YA+C   + A   F+EM +   VT+ A
Sbjct: 71  SKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNA 130

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKA---VSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           +++G ++      AL++++ M+ K+   +  D+++ SS L  C      V  D+      
Sbjct: 131 LIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACT-----VVGDI------ 179

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                  G+++   T+  G+ +D  + N+L++MY+K G ++SA  +F  L  R V++WN 
Sbjct: 180 -----SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNT 234

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG----------- 357
           MI+GY ++  +T+A+EL QRM     +P+ VT I +L AC    D++ G           
Sbjct: 235 MISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDG 294

Query: 358 -------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                    R++F+ M +  V +WN ++ +Y Q    K+A+ +F
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIF 354

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           ++MQ   V P+  TL+ +LS+CA +G    GK VHA         D  + + L+ +Y++C
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              +    VF  I +  +V W+++IA  + +         F ++ Q  +     +  + L
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTL 474

Query: 513 SSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKN 570
           S+C+      +G Q    +  D G   D      ++++  + G +  A     DM    +
Sbjct: 475 SACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPD 534

Query: 571 TVTWNEMIHG 580
            V W  ++ G
Sbjct: 535 AVAWTSLLSG 544



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 234/520 (45%), Gaps = 89/520 (17%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+LLHA IL   L + D  L   LI +Y++C                             
Sbjct: 77  GQLLHAMILETRLLEFDIILGTALITMYARCR---------------------------- 108

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM---SNEGFVPTHIT 122
              DLE A K FDEM ++ +V+WN LI+   RNG    AL +Y  M   S EG  P  IT
Sbjct: 109 ---DLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAIT 165

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            +S   A T + D+  GR      +  G   +  V NAL+++Y+KCG  + A  VF+ + 
Sbjct: 166 FSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK 225

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + + +  M+SG AK     +ALE+F+ M       + V+   +L  C           
Sbjct: 226 NRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTAC----------- 274

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK-NGDMDSAEVIFSNLPER 301
                        G+ +H    + G+E+DL + N LL+MY K +  ++ A  +F  +  R
Sbjct: 275 -----TNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTR 329

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-- 359
            V++WN++I  Y Q  Q+  A+++ ++M+     P+E+T  N+L AC   G  + G+   
Sbjct: 330 DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVH 389

Query: 360 ---------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                            +F ++   S+ SW+ ++++Y+Q  + +
Sbjct: 390 ALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSR 449

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS-GL 445
             ++ F E+   G+  D  T+   LS+C+  G+L+ G Q   + +       +Y     +
Sbjct: 450 TGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCM 509

Query: 446 IGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNS 484
           + + S+  R E AE + H +P L D V W S+++G  L++
Sbjct: 510 VDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHN 549



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 207/395 (52%), Gaps = 14/395 (3%)

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           + G +     +F ++  P+  SW  ++++++++ +++EA+  +R M   G++PD     +
Sbjct: 4   KCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVV 63

Query: 410 ILSSCAAMGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
            +  C++   L+ G+ +HA  L+T     D  + + LI +Y++C+  ELA + F  + + 
Sbjct: 64  AIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKK 123

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE---MYPTQFSFATVLSSCAKLSSSFQGR 525
            +V WN++IAG S N     A   ++ M       M P   +F++ L +C  +    QGR
Sbjct: 124 TLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGR 183

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           ++ A+    GY +D  V +ALI MY KCG +  AR+ FD +  ++ + WN MI GYA+ G
Sbjct: 184 EIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQG 243

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
              +A+ L++ M  +  KP+ +TF+ +LTAC++   ++ G  I   ++ D G E  L   
Sbjct: 244 AATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVRED-GYESDLVIG 302

Query: 646 TCMIDCLGR-AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
             +++   + +    EA  + + M  + D + W +L+ +   +     AK A +   ++ 
Sbjct: 303 NVLLNMYTKCSSSLEEARQVFERMRTR-DVITWNILIVA---YVQYGQAKDALDIFKQMQ 358

Query: 705 PKNSAPYSL-LANIYSS---LGRWDDLRAVRELMS 735
            +N AP  + L+N+ S+   LG     +AV  L++
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQGKAVHALIA 393



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 205/454 (45%), Gaps = 56/454 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ + A  + +G   D+ + N LI +YSKC +                            
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGS---------------------------- 213

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              LE A K+FD +  R+V++WN +IS   + G   +AL ++ +M      P  +T   +
Sbjct: 214 ---LESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGL 270

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT-KHAVPVFEEMSEPN 185
             A T L D+E GR  H  V + G + ++ + N LL++Y KC  + + A  VFE M   +
Sbjct: 271 LTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRD 330

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +T+  ++    +  +  +AL++F+ M  + V+ + ++LS+VL  CA  G          
Sbjct: 331 VITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGA--------- 381

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+ VH L      +AD+ L NSL++MY + G +D    +F+ + ++S+VS
Sbjct: 382 -------KRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVS 434

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W+ +IA Y Q   S   +E    +   G   D+VT ++ L AC   G +K G + F SM 
Sbjct: 435 WSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMV 494

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                +P    +  M+   S++   + A  L  +M F    PD      +LS C      
Sbjct: 495 GDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFL---PDAVAWTSLLSGCKLHNDT 551

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +   +V     +  S  ++   + L  +Y++  R
Sbjct: 552 KRAARVADKLFELESEDEHSTVTLLSNVYAEAGR 585


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 232/749 (30%), Positives = 364/749 (48%), Gaps = 86/749 (11%)

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT- 119
           LS  C+      A  LFD +P    V WN +I   + N +   AL  Y +M      P+ 
Sbjct: 44  LSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRAS---PSP 100

Query: 120 ---HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
                T +S  KA      ++ G+  H  V++     +  V N+LL++Y+ C      VP
Sbjct: 101 KFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTC---LTEVP 157

Query: 177 ----------------VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
                           VF+ M + N V +  M+S   KT+R++EA +MFR M+R  +   
Sbjct: 158 YLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPT 217

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG--FEADLHLSNSL 278
            VS  +V              V+  SD   +  ++G     L +KLG  F  D  + +S 
Sbjct: 218 PVSFVNVF-----------PAVWRMSDYDNANVLYG-----LVVKLGSDFVDDFFVVSSA 261

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL-LQRMKSCGFEPD 337
           + MYA+ G +D A  IF    ER+   WN MI GY Q     +AI+L +Q M+S  F  D
Sbjct: 262 IFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLD 321

Query: 338 EVTSINMLVACV-----------------------------------RSGDIKTGREMFD 362
           +VT ++ L A                                     R G I T  ++F 
Sbjct: 322 DVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFS 381

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
           +M    V +WN M+S++ Q+    E + L   MQ +G   D  TL  +LS  + +   E 
Sbjct: 382 NMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEI 441

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI--VCWNSMIAGL 480
           GKQ HA  ++     +  + S LI +Y+K      A+++F +  + D     WN+MIAG 
Sbjct: 442 GKQAHAYLIRHGIQFEG-MDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGY 500

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           + N L  E F  F++M +  + P   + A++L +C  + +   G+Q+H    +     ++
Sbjct: 501 TQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNV 560

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
           FVG+AL++MY K G I  A   F     KN+VT+  MI  Y Q+G G+ A+ L+  M+ S
Sbjct: 561 FVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGS 620

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G+KPD +TFVAIL+ACS++GLVD G+ IF SM+ ++ ++P  +HY C+ D LGR G   E
Sbjct: 621 GIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVE 680

Query: 661 AEMLIDEMPCKDDPV-IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP--YSLLANI 717
           A   +  +  + +   IW  LL +CR+H    L K  A +L  ++  +S    + LL+NI
Sbjct: 681 AYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNI 740

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y++ G WD++  VR+ M +  ++K+   S
Sbjct: 741 YAAEGNWDNVDRVRKEMRQKGLMKEAGCS 769



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 145/604 (24%), Positives = 271/604 (44%), Gaps = 105/604 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKC-------------NNTHSAQHLFDKMPHKD 53
           GK LH H+LR+       + N L+ +YS C             NN    + +FD M  ++
Sbjct: 123 GKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRN 182

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           + +WN ++S   K++ L  A+K+F  M               +R G+             
Sbjct: 183 VVAWNTMISWYVKTERLIEAFKMFRTM---------------MRMGIR------------ 215

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLD--KNIYVANALLSLYAKCGWT 171
               PT ++  +VF A   + D ++    +GLV+K+G D   + +V ++ + +YA+ G  
Sbjct: 216 ----PTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCV 271

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGV 230
             A  +F+   E N   +  M+ G  + +  +EA+++F ++M  +   +D V+  S L  
Sbjct: 272 DFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSAL-- 329

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
                          + ++      G+Q+H   +K      + + N+++ MY++ G + +
Sbjct: 330 --------------TAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGT 375

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-- 348
           +  +FSN+ ER VV+WN M++ + Q     + + L+  M+  GF  D VT   +L     
Sbjct: 376 SFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASN 435

Query: 349 --------------------------------VRSGDIKTGREMFD--SMPSPSVSSWNA 374
                                            +SG I T +++F+  S      ++WNA
Sbjct: 436 LRSQEIGKQAHAYLIRHGIQFEGMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNA 495

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M++ Y+Q+   +E   +FR+M  + V+P+  TLA IL +C  MG +  GKQ+H  +++  
Sbjct: 496 MIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCF 555

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
            + + +V + L+ +YSK      AE VF    E + V + +MI+    + +   A   F 
Sbjct: 556 LNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFH 615

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
            M  + + P   +F  +LS+C+      +G ++   +E++  +      SA  E YC   
Sbjct: 616 AMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQP----SA--EHYCCVA 669

Query: 555 DIYG 558
           D+ G
Sbjct: 670 DMLG 673



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 202/430 (46%), Gaps = 63/430 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA+IL++       + N +I +YS+C +  ++                        
Sbjct: 341 GRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTS------------------------ 376

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  +K+F  M ER+VV+WN ++SA V+NGL+++ L +   M  +GF+   +TL ++
Sbjct: 377 -------FKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTAL 429

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS--EP 184
              ++ L   E G++ H  +I+ G+     + + L+ +YAK G    A  +FE+ S  + 
Sbjct: 430 LSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLITTAQQLFEKNSDYDR 488

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +E T+ AM++G  +     E   +FR MI + V  ++V+L+S+L  C             
Sbjct: 489 DEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPAC------------- 535

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
              N       G+Q+H   I+     ++ +  +LLDMY+K+G +  AE +F+   E++ V
Sbjct: 536 ---NPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSV 592

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           ++  MI+ YGQ     +A+ L   M   G +PD VT + +L AC  +G +  G  +F SM
Sbjct: 593 TYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSM 652

Query: 365 P-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI---ILSSCAA 416
                  PS   +  +     +     EA +       +G+  +  T  I   +L +C  
Sbjct: 653 EREYKIQPSAEHYCCVADMLGRVGRVVEAYEF-----VKGLGEEGNTFGIWGSLLGACRI 707

Query: 417 MGILESGKQV 426
            G  E GK V
Sbjct: 708 HGEFELGKVV 717


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 205/643 (31%), Positives = 324/643 (50%), Gaps = 56/643 (8%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H L +K+G   ++Y  N +L+ Y KC   + A  +F+EM   + V++  M++G      +
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHC 261
             + ++ R M      +D  +  S+L   A                 F+   H GQQVH 
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIA-----------------FAGMFHLGQQVHS 123

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
           + IK+G+  +++  ++LLDMYAK   ++ A + F ++ + + VSWN MI GY Q      
Sbjct: 124 IIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRET 183

Query: 322 AIELLQRMKSCGFEPDEVTSINM-----------LVACVRSGDIKTGREMFDSMPSPSVS 370
           A  LL  M+  G + D+ T   +           L + +    IK G E+ ++M +  ++
Sbjct: 184 AFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALIT 243

Query: 371 S-------------------------WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           S                         WN++L++Y        A KL  +MQ  G +PD  
Sbjct: 244 SYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLY 303

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER--VFH 463
           +   I+S+C    I  +G+ +H   +K        +++ LI +Y K     + E   +F 
Sbjct: 304 SYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFE 363

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            +   D V WNS++ GLS      +A   F  MR   M    +SF+ VL SC+ L++   
Sbjct: 364 SLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQL 423

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           G+Q+H    K G  ++ FV S+LI MY KCG I  AR+ F+     +++TWN ++ GYAQ
Sbjct: 424 GQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQ 483

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
           +G  + A+ L+  M    VK D ITFVA+LTACSH GLV+ G +    M+ D+GV P ++
Sbjct: 484 HGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRME 543

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
           HY C +D  GR+G   EA+ LI+EMP K D  +W+  L +CR   N+ LA + A  L  +
Sbjct: 544 HYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEM 603

Query: 704 DPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +P+    Y LL+N+Y +L RWD+   V+ LM E  + K P +S
Sbjct: 604 EPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWS 646



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 159/615 (25%), Positives = 272/615 (44%), Gaps = 89/615 (14%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y+ N IL+   K  +L  A  LFDEMP R+ VSWN +I+  +  G  E +  V   M 
Sbjct: 32  DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMR 91

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           + GF     T  S+ K          G++ H ++IK+G  +N+Y  +ALL +YAKC   +
Sbjct: 92  SCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE 151

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC- 231
            A   F  +S+ N V++ AM++G A+      A  +   M ++   +D  + + +L +  
Sbjct: 152 DAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLD 211

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
             + C + S                 Q+H   IK G E    + N+L+  Y+K G +D A
Sbjct: 212 DADFCNLTS-----------------QLHGKIIKHGLELVNTMCNALITSYSKCGSLDDA 254

Query: 292 EVIF-SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           + IF S+   R +V+WN ++A Y  + Q   A +LL  M+  GFEPD  +  +++ AC  
Sbjct: 255 KRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFN 314

Query: 351 SGDIKTGREM-------------------------------------FDSMPSPSVSSWN 373
                 GR +                                     F+S+      SWN
Sbjct: 315 ENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWN 374

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           ++L+  SQ+ + ++A+K F  M+   +  D  + + +L SC+ +   + G+Q+H  +LK 
Sbjct: 375 SILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKY 434

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               + +V+S LI +YSKC   E A R F    +   + WN+++ G + +     A   F
Sbjct: 435 GLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLF 494

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
             M + ++     +F  VL++C+ +    QG +    +E D  V         +E Y   
Sbjct: 495 FLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGV------PPRMEHYACA 548

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
            D+YG                        ++G  +EA  L ++M     KPD   +   L
Sbjct: 549 VDLYG------------------------RSGRLEEAKALIEEM---PFKPDTTVWKTFL 581

Query: 614 TACSHSGLVDVGVEI 628
            AC   G +++  ++
Sbjct: 582 GACRSCGNIELACQV 596



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 209/448 (46%), Gaps = 60/448 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH  I+++GL     +CN LI  YSKC +                               
Sbjct: 222 LHGKIIKHGLELVNTMCNALITSYSKCGS------------------------------- 250

Query: 70  LEFAYKLFDEMPE-RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
           L+ A ++FD     R++V+WN+L++A +    E+ A  +   M   GF P   +  S+  
Sbjct: 251 LDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIIS 310

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC--GWTKHAVPVFEEMSEPNE 186
           A        +GR  HGLVIK G ++++ ++NAL+S+Y K   G  K A+ +FE +   + 
Sbjct: 311 ACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDR 370

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ ++++GL++T    +A++ F  M   A+ ID  S S+VL  C+              
Sbjct: 371 VSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCS-------------- 416

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    GQQ+H L +K G E++  +S+SL+ MY+K G ++ A   F    + S ++W
Sbjct: 417 --DLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITW 474

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N ++ GY Q  Q   A++L   M+    + D +T + +L AC   G ++ G +    M S
Sbjct: 475 NALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMES 534

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +   +  Y +S   +EA  L  EM F   KPD T     L +C + G +E
Sbjct: 535 DYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPF---KPDTTVWKTFLGACRSCGNIE 591

Query: 422 SGKQV--HAASLKTASHIDNYVASGLIG 447
              QV  H   ++   H    + S + G
Sbjct: 592 LACQVAGHLLEMEPEEHCTYVLLSNMYG 619



 Score = 45.8 bits (107), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 86/221 (38%), Gaps = 15/221 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   L+ GL  + F+ + LI +YSKC     A+  F++       +WNA++    +
Sbjct: 424 GQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQ 483

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT--- 119
                 A  LF  M E+ V    +++  +++A    GL E+       M ++  VP    
Sbjct: 484 HGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRME 543

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV-- 177
           H   A      +  L+         L+ ++    +  V    L     CG  + A  V  
Sbjct: 544 HYACAVDLYGRSGRLE-----EAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAG 598

Query: 178 -FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
              EM      T+  + +      R  E  ++ RLM  + V
Sbjct: 599 HLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGV 639


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 196/661 (29%), Positives = 338/661 (51%), Gaps = 55/661 (8%)

Query: 124  ASVFKASTALLDVEHGRRCHGLVIKIG--LDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            A + +   A  D   GR  HG V++ G     +++ AN LL++Y K G    A  VF+ +
Sbjct: 432  ARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGL 491

Query: 182  SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG-VCAREGCGVES 240
             E N V+F  ++ G A      EA  +F+ +  +   ++   L++VL  V A +  G+  
Sbjct: 492  PERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGL-- 549

Query: 241  DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                              VH    KLG + +  + ++L+D Y+  G +  A  +F  +  
Sbjct: 550  ---------------AWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVG 594

Query: 301  RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC--GFEPDEVTSINMLVACVRS------- 351
            +  V+W  M++ Y +       +++  +M+       P  +TS+     C+ S       
Sbjct: 595  KDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGI 654

Query: 352  --------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                      G+I+  R  F+ + +  V  W+ M+S Y+Q   +
Sbjct: 655  HACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQN 714

Query: 386  KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            ++A +LF  M    V P+  +L+ +L +CA M +L+ GKQ+H  ++K     + +V + L
Sbjct: 715  EQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNAL 774

Query: 446  IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
            I +Y+KC   E +  +F  + +++ V WN++I G S +     A   F++MR   +  TQ
Sbjct: 775  IDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQ 834

Query: 506  FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
             ++++VL +CA  +S     QVH  IEK  + +D  V ++LI+ Y KCG I  AR+ F+ 
Sbjct: 835  VTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFET 894

Query: 566  MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
            +   + V+WN +I GYA +G    A  L+  M  + +K +DITFVA+L+ C  +GLV  G
Sbjct: 895  LKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQG 954

Query: 626  VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            + +F+SM+LDHG+EP ++HYTC++  LGRAG  ++A   I ++P     ++W  LLSSC 
Sbjct: 955  LSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCI 1014

Query: 686  LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
            +H NV L + +AE++  ++P++   Y LL+N+YS+ G  D +   R+ M    + K+P  
Sbjct: 1015 VHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGL 1074

Query: 746  S 746
            S
Sbjct: 1075 S 1075



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 261/566 (46%), Gaps = 59/566 (10%)

Query: 53   DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
            D++  N +L+   K      A+++FD +PERN+VS+  L+      G  E+A +++ ++ 
Sbjct: 464  DLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLR 523

Query: 113  NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             EG       L +V K   A+  +      H    K+G D+N +V +AL+  Y+ CG   
Sbjct: 524  WEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVS 583

Query: 173  HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS-IDSVSLSSVL--G 229
             A  VF+ +   + V +TAM+S  ++ D     L++F  M R AVS ++  +L+SVL   
Sbjct: 584  DARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKM-RVAVSKLNPFALTSVLRAA 642

Query: 230  VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            VC                   S  V G+ +H  ++K  ++ + H+  +LLDMYAK G+++
Sbjct: 643  VC------------------LSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIE 684

Query: 290  SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC- 348
             A + F  +    V+ W++MI+ Y Q  Q+ +A EL  RM      P+E +  ++L AC 
Sbjct: 685  DARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACA 744

Query: 349  ----------------------------------VRSGDIKTGREMFDSMPSPSVSSWNA 374
                                               +  D+++  E+F S+   +  SWN 
Sbjct: 745  NMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNT 804

Query: 375  MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
            ++  YS+S   + A+ +FREM+   V   + T + +L +CA+   +    QVH    K+ 
Sbjct: 805  IIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKST 864

Query: 435  SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             + D  V++ LI  Y+KC     A  +F  + E D+V WN++I+G +++     A   F 
Sbjct: 865  FNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFD 924

Query: 495  QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKC 553
             M +N +     +F  +LS C       QG  +   +  D G    +   + ++ +  + 
Sbjct: 925  MMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRA 984

Query: 554  GDIYGARQFF-DMMHGKNTVTWNEMI 578
            G +  A  F  D+    + + W  ++
Sbjct: 985  GRLNDALNFIGDIPSAPSAMVWRALL 1010



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 206/449 (45%), Gaps = 82/449 (18%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +HA   + G   + F+ + LI+ YS C     A+ +FD +  KD  +W A++S   ++D 
Sbjct: 553 VHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDC 612

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
            E   ++F +M                       A+S  N  +          L SV +A
Sbjct: 613 PENTLQIFSKM---------------------RVAVSKLNPFA----------LTSVLRA 641

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
           +  L  V  G+  H   +K   D   +V  ALL +YAKCG  + A   FE ++  + + +
Sbjct: 642 AVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILW 701

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           + M+S  A+ ++  +A E+F  M+R +VS +  SLSSVL  CA               N 
Sbjct: 702 SLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACA---------------NM 746

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
              ++ G+Q+H   IK+G E++L + N+L+D+YAK  DM+S+  IFS+L + + VSWN +
Sbjct: 747 PLLDL-GKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTI 805

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------- 348
           I GY +      A+ + + M++      +VT  ++L AC                     
Sbjct: 806 IVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTF 865

Query: 349 --------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + G I+  RE+F+++    + SWNA++S Y+       A +LF  
Sbjct: 866 NSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDM 925

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M    +K +  T   +LS C + G++  G
Sbjct: 926 MSKNSIKANDITFVALLSVCGSTGLVSQG 954



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 186/389 (47%), Gaps = 28/389 (7%)

Query: 41   SAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGL 100
            S + L+D   H     + A+L    K  ++E A   F+ +   +V+ W+ +IS   +   
Sbjct: 658  SVKTLYDTERH----VYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQ 713

Query: 101  EEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANA 160
             E+A  ++ +M      P   +L+SV +A   +  ++ G++ H   IKIG +  ++V NA
Sbjct: 714  NEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNA 773

Query: 161  LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
            L+ LYAKC   + ++ +F  + + NEV++  ++ G +K+     AL +FR M   +V   
Sbjct: 774  LIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPST 833

Query: 221  SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
             V+ SSVL  CA             S N      H  QVHCL  K  F +D  +SNSL+D
Sbjct: 834  QVTYSSVLRACASTA----------SIN------HVGQVHCLIEKSTFNSDTIVSNSLID 877

Query: 281  MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
             YAK G +  A  IF  L E  +VSWN +I+GY    Q+  A EL   M     + +++T
Sbjct: 878  SYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDIT 937

Query: 341  SINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
             + +L  C  +G +  G  +FDSM       PS+  +  ++    ++    +A+    ++
Sbjct: 938  FVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDI 997

Query: 396  QFRGVKPDRTTLAIILSSCAAMGILESGK 424
                  P       +LSSC     +E G+
Sbjct: 998  P---SAPSAMVWRALLSSCIVHKNVELGR 1023



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 147/312 (47%), Gaps = 11/312 (3%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTA--SHIDNYVASGLIGIYSKCQRNELAER 460
           D    A +L  C A G    G+ VH   +++   + +D + A+ L+ +Y+K      A R
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           VF  +PE ++V + +++ G +L     EA   F+++R       QF   TVL     + +
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
                 VHA   K G+  + FVGSALI+ Y  CG +  AR+ FD + GK+ V W  M+  
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA--CSHSGLVDVGVEIFNSMQLDHGV 638
           Y++N   +  ++++  M  +  K +     ++L A  C  S ++  G+   +   L    
Sbjct: 607 YSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTE 666

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
             +   Y  ++D   + G+  +A +   EM   DD ++W +++S    +A     ++A E
Sbjct: 667 RHV---YGALLDMYAKCGNIEDARLAF-EMVTNDDVILWSLMISR---YAQCNQNEQAFE 719

Query: 699 ELFRLDPKNSAP 710
              R+   + +P
Sbjct: 720 LFIRMMRSSVSP 731



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 31/229 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H H ++ G   + F+ N LI+LY+KC++  S+  +F  +   +  SWN I+    K
Sbjct: 752 GKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSK 811

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S                               G  E ALSV+ +M       T +T +SV
Sbjct: 812 S-------------------------------GFGEAALSVFREMRAASVPSTQVTYSSV 840

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A  +   + H  + H L+ K   + +  V+N+L+  YAKCG  + A  +FE + E + 
Sbjct: 841 LRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDL 900

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           V++ A++SG A   +   A E+F +M + ++  + ++  ++L VC   G
Sbjct: 901 VSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTG 949



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 5/115 (4%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H  I ++    DT + N LI+ Y+KC     A+ +F+ +   D+ SWNAI+S       
Sbjct: 856 VHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQ 915

Query: 70  LEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPT 119
              A +LFD M + ++    +++  L+S     GL  + LS+++ M  + G  P+
Sbjct: 916 AAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPS 970


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 198/649 (30%), Positives = 330/649 (50%), Gaps = 69/649 (10%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D+E  R+ H   I      N+++ N ++  Y KCG    A   F+ ++  N+ ++ +M++
Sbjct: 39  DLESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLT 97

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA-----REGCGVESDVFAQSDNK 249
             A+      AL++++   R  +  + V  ++VLG CA      EG  + S +   S  K
Sbjct: 98  AYAQNGHYRAALDLYK---RMDLQPNPVVYTTVLGACASIEALEEGKAIHSRI---SGTK 151

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVSWNV 308
                            G + D+ L NSLL MYAK G ++ A+ +F  +   RSV SWN 
Sbjct: 152 -----------------GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNA 194

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-------- 360
           MIA Y Q     +AI L + M     EP   T  ++L AC   G +  GR++        
Sbjct: 195 MIAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRG 251

Query: 361 ---------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                      F  +P   V SW+AM++++++++   EAI+ + 
Sbjct: 252 TELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYS 311

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           +MQ  GV+P+  T A +L +CA++G L +G+ VH   L     I     + L+ +Y+   
Sbjct: 312 KMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYG 371

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP-TQFSFATVL 512
             + A  +F +I   D   W  +I G S           +++M+     P T+  ++ V+
Sbjct: 372 SLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVI 431

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           S+CA L +    RQ H+ IE DG ++D  + ++L+ MY + G++  ARQ FD M  ++T+
Sbjct: 432 SACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTL 491

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
            W  +I GYA++G    A+ LYK+M   G +P ++TF+ +L ACSH+GL + G ++F S+
Sbjct: 492 AWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISI 551

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
           Q D+ + P + HY+C+ID L RAG   +AE LI+ MP + + V W  LL + R+H +V+ 
Sbjct: 552 QSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKR 611

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           A  AA ++ +LDP + A Y LL+N+++  G    + +VR  M    + K
Sbjct: 612 ATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKK 660



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 157/617 (25%), Positives = 279/617 (45%), Gaps = 105/617 (17%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           + FL N ++  Y KC +  SA+  FD +  K+ YSW ++L+A  +               
Sbjct: 57  NVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQ--------------- 101

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
                           NG    AL +Y +M      P  +   +V  A  ++  +E G+ 
Sbjct: 102 ----------------NGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIEALEEGKA 142

Query: 142 CHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV-TFTAMMSGLAKT 199
            H  +    GL  ++ + N+LL++YAKCG  + A  +FE MS    V ++ AM++  A++
Sbjct: 143 IHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQS 202

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
               EA+ ++  M    V     + +SVL  C+  G      +  Q          G+++
Sbjct: 203 GHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLG------LLDQ----------GRKI 243

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H L    G E DL L N+LL MYA+   +D A  IF  LP R VVSW+ MIA + +    
Sbjct: 244 HALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLF 303

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG---------------------- 357
            +AIE   +M+  G  P+  T  ++L+AC   GD++ G                      
Sbjct: 304 DEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTAL 363

Query: 358 -------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ-FRGVKPD 403
                        R +FD + +     W  ++  YS+  +    ++L+REM+    V   
Sbjct: 364 VDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPAT 423

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV-ASGLIGIYSKCQRNELAERVF 462
           +   + ++S+CA++G     +Q H + ++    I ++V A+ L+ +YS+    E A +VF
Sbjct: 424 KIIYSCVISACASLGAFADARQAH-SDIEADGMISDFVLATSLVNMYSRWGNLESARQVF 482

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
            ++   D + W ++IAG + +     A   +K+M      P++ +F  VL +C+      
Sbjct: 483 DKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQE 542

Query: 523 QGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHG 580
           QG+Q+   I+ D  ++ +I   S +I++  + G +  A +  + M  + N VTW+ ++  
Sbjct: 543 QGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLG- 601

Query: 581 YAQNGYGDEAVRLYKDM 597
                    A R++KD+
Sbjct: 602 ---------ASRIHKDV 609



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 39/188 (20%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           H+ I  +G+  D  L   L+ +YS+  N  SA+ +FDKM  +D  +W             
Sbjct: 447 HSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAW------------- 493

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
                               LI+   ++G    AL +Y +M  EG  P+ +T   V  A 
Sbjct: 494 ------------------TTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYAC 535

Query: 131 TALLDVEHGRRCHGLVIKIGLD----KNIYVANALLSLYAKCGWTKHAVPVFEEMS-EPN 185
           +     E G++   L I I  D     NI   + ++ L ++ G    A  +   M  EPN
Sbjct: 536 SHAGLQEQGKQ---LFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPN 592

Query: 186 EVTFTAMM 193
           +VT+++++
Sbjct: 593 DVTWSSLL 600


>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
          Length = 794

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 227/779 (29%), Positives = 363/779 (46%), Gaps = 117/779 (15%)

Query: 6   AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            G+ +HA IL+ G F   + ++  +L+  Y+KC                           
Sbjct: 52  TGQQIHAQILKKGDFYARNEYIETKLVIFYAKC--------------------------- 84

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
               D LE A  LF ++  RNV SW  +I    R GL E AL  + +M   G  P +  +
Sbjct: 85  ----DALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVV 140

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +V KA  AL     GR  HG V K GL   ++VA++L  +Y KCG    A  VF+ + +
Sbjct: 141 PNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPD 200

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V + A+M G  +     EA+ +   M ++ +    V++S+ L   A  G G+E    
Sbjct: 201 RNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMG-GIE---- 255

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q H + I  G E D  L  S+L+ Y K G ++ AE+IF  + E+ V
Sbjct: 256 -----------EGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDV 304

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           V+WN++I+GY Q+    +AI + Q M+    + D VT   ++ A   + ++K G+E+   
Sbjct: 305 VTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCY 364

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           FDS     +  WN +LS+Y+ S    EA
Sbjct: 365 CIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEA 424

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           ++LF EMQ   V P+  T  +I+ S    G +   K++    L+  S           GI
Sbjct: 425 LRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMF---LQMQSS----------GI 471

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           +                   +++ W +M+ GL  N    EA +F ++M+++ + P  F+ 
Sbjct: 472 FP------------------NLISWTTMMNGLVQNGCSEEAILFLRKMQESRLRPNAFTI 513

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              LS+CA L+S   GR +H  I ++  Y     + ++L++MY KCGDI  A + F    
Sbjct: 514 TVALSACANLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKL 573

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
                 +N MI  YA  G   EA+ LY+ +   GVKPD+IT  ++L+ C++   V+  +E
Sbjct: 574 CSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLS-CNYGRDVNQAIE 632

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           +F+ M   HG++P L+HY  M+D L  AG   +A  L++EMP K D  + + L  SC   
Sbjct: 633 VFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMVQSLFESCSKQ 692

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
               L +  ++ L   +P NS  Y +++N Y+  G WD++  +RE+M    + K P  S
Sbjct: 693 HKTELVEYLSKHLLESEPDNSGNYVMISNAYAVEGSWDEVAKMREMMKVKGLKKKPGCS 751



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 161/314 (51%), Gaps = 14/314 (4%)

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +SS  ++   +EA+ L  EM +R ++        IL  C     L +G+Q+HA  LK   
Sbjct: 6   VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGD 65

Query: 436 HI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               + Y+ + L+  Y+KC   E+A+ +F ++   ++  W ++I       L   A M F
Sbjct: 66  FYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGF 125

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
            +M +N ++P  F    V  +C  L  S  GR VH  + K G  + +FV S+L +MY KC
Sbjct: 126 VEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKC 185

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +  AR+ FD +  +N V WN ++ GY QNG  +EA+RL  +M   G++P  +T    L
Sbjct: 186 GVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCL 245

Query: 614 TACSHSGLVDVG-----VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           +A ++ G ++ G     + I N ++LD+ +   + ++ C      + G    AEM+ D M
Sbjct: 246 SASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYC------KVGLIEYAEMIFDGM 299

Query: 669 PCKDDPVIWEVLLS 682
             + D V W +L+S
Sbjct: 300 -IEKDVVTWNLLIS 312


>gi|302793458|ref|XP_002978494.1| hypothetical protein SELMODRAFT_108969 [Selaginella moellendorffii]
 gi|300153843|gb|EFJ20480.1| hypothetical protein SELMODRAFT_108969 [Selaginella moellendorffii]
          Length = 644

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 207/662 (31%), Positives = 351/662 (53%), Gaps = 42/662 (6%)

Query: 73  AYKLFDEMPER-NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
           A ++FD +  R NV SW+ +ISA  +NG   +AL ++  M  EG  P   TL+SV  A +
Sbjct: 11  ARQVFDALGWRKNVFSWSIIISAYAQNGHFREALQLFQAMDLEGMQPNSFTLSSVVAACS 70

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC-GWTKHAVPVFEEMSEPNEVTFT 190
            L D    R  H  ++  G   + +VA A+++++++C G    A  VF+ M+  + V++ 
Sbjct: 71  GLEDPLQARAIHSRIVGAGFGSDEFVATAMVAMFSRCDGCWIDAKAVFDGMASRSVVSWN 130

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           A++SG  +     +AL +   M  +    D  SL+++L  C              S  + 
Sbjct: 131 AVISGAIRGGEKDQALRLLWRMDNEGTKPDQFSLTTILSAC--------------SSVRE 176

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
            R  H +         GF+A L + NSL+D Y K G +  A+++F  + ER V+SW  +I
Sbjct: 177 CREFHAR-----IQASGFQAMLAVQNSLMDCYGKCGSLRDAKMVFDEMVERDVISWTCLI 231

Query: 311 AGYGQKYQSTKAIELLQRMKSCG------FEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           A Y    +S +AI + + M+          +P+  T   +  AC   G ++ GR ++  +
Sbjct: 232 ASYVHNDESREAIAIYELMEESARRSLSSLQPNVCTFTAVAEACSIVGALEQGRALYSRI 291

Query: 365 PSPSVSSWNAMLSSYSQSENHKE--AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
              +V++WN +++S +Q+++      ++LF EM   G K D  T A  L  C     ++ 
Sbjct: 292 ---NVAAWNFVIASIAQADSSAAADVLELFGEMALEGTKADGVTFAAALGVCTNH--VDR 346

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           GK +H+ +       +N V + LI +YS+  R + A   F +I E  +V W+S++ G + 
Sbjct: 347 GKSLHSFARDAGLDRENAVGAALIAMYSRSGRLDEAWTAFEKIREKSVVAWSSLMTGYAQ 406

Query: 483 NSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ-IEKDGYVNDI 540
              +  A   +++M  ++E+ P +F+F+T+L  CA+L ++ +GR+VH+Q +   G+  D 
Sbjct: 407 QGKNWRALQLYEEMILESEVLPDKFTFSTILGVCAELGAAEEGRRVHSQMLACLGFERDA 466

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            +G++LI+M+ KCG+I  A+  FD M  +N  TW  ++ G A++G G++AV   + M   
Sbjct: 467 VLGTSLIDMFAKCGNIDAAKLVFDGMLERNVQTWTTLVAGLARHGRGEQAVWWLRRMSME 526

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G   D  T   IL  C+H GL+D G   F     ++G++   +HY C++D LGRAG   +
Sbjct: 527 GFCADQATVTTILHGCNHGGLIDAGRCCFRLAGGEYGIQASCEHYDCVVDLLGRAGRLKD 586

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           AE L   M   DD   W +LL +CR+HA++ +AKRAA    R+  ++ +   LL+NIYS 
Sbjct: 587 AESLAAAM---DDQAPWRILLGACRIHADLAVAKRAAP---RVVEESHSHAMLLSNIYSD 640

Query: 721 LG 722
            G
Sbjct: 641 GG 642



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 184/393 (46%), Gaps = 58/393 (14%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
            HA I  +G      + N L++ Y KC +   A+ +FD+M  +D+ SW  ++++   +D+
Sbjct: 180 FHARIQASGFQAMLAVQNSLMDCYGKCGSLRDAKMVFDEMVERDVISWTCLIASYVHNDE 239

Query: 70  LEFA---YKLFDEMPER-----------------------------------NVVSWNNL 91
              A   Y+L +E   R                                   NV +WN +
Sbjct: 240 SREAIAIYELMEESARRSLSSLQPNVCTFTAVAEACSIVGALEQGRALYSRINVAAWNFV 299

Query: 92  I--SALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI 149
           I   A   +      L ++ +M+ EG     +T A+     T    V+ G+  H      
Sbjct: 300 IASIAQADSSAAADVLELFGEMALEGTKADGVTFAAALGVCTN--HVDRGKSLHSFARDA 357

Query: 150 GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
           GLD+   V  AL+++Y++ G    A   FE++ E + V ++++M+G A+  +   AL+++
Sbjct: 358 GLDRENAVGAALIAMYSRSGRLDEAWTAFEKIREKSVVAWSSLMTGYAQQGKNWRALQLY 417

Query: 210 RLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
             MI ++ V  D  + S++LGVCA  G   E            R VH Q + C    LGF
Sbjct: 418 EEMILESEVLPDKFTFSTILGVCAELGAAEE-----------GRRVHSQMLAC----LGF 462

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           E D  L  SL+DM+AK G++D+A+++F  + ER+V +W  ++AG  +  +  +A+  L+R
Sbjct: 463 ERDAVLGTSLIDMFAKCGNIDAAKLVFDGMLERNVQTWTTLVAGLARHGRGEQAVWWLRR 522

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
           M   GF  D+ T   +L  C   G I  GR  F
Sbjct: 523 MSMEGFCADQATVTTILHGCNHGGLIDAGRCCF 555



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/508 (21%), Positives = 210/508 (41%), Gaps = 125/508 (24%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTH-SAQHLFDKMPHKDIYSWNAILSAQCK 66
           + +H+ I+  G   D F+   ++ ++S+C+     A+ +FD M  + + SWNA+      
Sbjct: 79  RAIHSRIVGAGFGSDEFVATAMVAMFSRCDGCWIDAKAVFDGMASRSVVSWNAV------ 132

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    IS  +R G +++AL +  +M NEG  P   +L ++
Sbjct: 133 -------------------------ISGAIRGGEKDQALRLLWRMDNEGTKPDQFSLTTI 167

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++   V   R  H  +   G    + V N+L+  Y KCG  + A  VF+EM E + 
Sbjct: 168 LSACSS---VRECREFHARIQASGFQAMLAVQNSLMDCYGKCGSLRDAKMVFDEMVERDV 224

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLM---IRKAVS------------IDSVSLSSVL--- 228
           +++T +++     D   EA+ ++ LM    R+++S             ++ S+   L   
Sbjct: 225 ISWTCLIASYVHNDESREAIAIYELMEESARRSLSSLQPNVCTFTAVAEACSIVGALEQG 284

Query: 229 ----------------------------------GVCAREGCGVESDVFAQSDNKFSRNV 254
                                             G  A EG   +   FA +    + +V
Sbjct: 285 RALYSRINVAAWNFVIASIAQADSSAAADVLELFGEMALEGTKADGVTFAAALGVCTNHV 344

Query: 255 -HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
             G+ +H      G + +  +  +L+ MY+++G +D A   F  + E+SVV+W+ ++ GY
Sbjct: 345 DRGKSLHSFARDAGLDRENAVGAALIAMYSRSGRLDEAWTAFEKIREKSVVAWSSLMTGY 404

Query: 314 GQKYQSTKAIELLQ------------------------------------RMKSC-GFEP 336
            Q+ ++ +A++L +                                    +M +C GFE 
Sbjct: 405 AQQGKNWRALQLYEEMILESEVLPDKFTFSTILGVCAELGAAEEGRRVHSQMLACLGFER 464

Query: 337 DEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
           D V   +++    + G+I   + +FD M   +V +W  +++  ++    ++A+   R M 
Sbjct: 465 DAVLGTSLIDMFAKCGNIDAAKLVFDGMLERNVQTWTTLVAGLARHGRGEQAVWWLRRMS 524

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGK 424
             G   D+ T+  IL  C   G++++G+
Sbjct: 525 MEGFCADQATVTTILHGCNHGGLIDAGR 552



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 13/167 (7%)

Query: 549 MYCKCGDIYGARQFFDMMHG-KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
           MY KC  +  ARQ FD +   KN  +W+ +I  YAQNG+  EA++L++ M   G++P+  
Sbjct: 1   MYGKCRSVVEARQVFDALGWRKNVFSWSIIISAYAQNGHFREALQLFQAMDLEGMQPNSF 60

Query: 608 TFVAILTACSHSGLVD-VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA-GHFHEAEMLI 665
           T  +++ AC  SGL D +     +S  +  G        T M+    R  G + +A+ + 
Sbjct: 61  TLSSVVAAC--SGLEDPLQARAIHSRIVGAGFGSDEFVATAMVAMFSRCDGCWIDAKAVF 118

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKR--AAEELFRLDPKNSAP 710
           D M  +   V W  ++S       +R  ++  A   L+R+D + + P
Sbjct: 119 DGMASR-SVVSWNAVISGA-----IRGGEKDQALRLLWRMDNEGTKP 159



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 32/140 (22%)

Query: 7   GKLLHAHILRN-GLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ +H+ +L   G   D  L   LI++++KC N  +A+ +FD M                
Sbjct: 449 GRRVHSQMLACLGFERDAVLGTSLIDMFAKCGNIDAAKLVFDGML--------------- 493

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                           ERNV +W  L++ L R+G  E+A+    +MS EGF     T+ +
Sbjct: 494 ----------------ERNVQTWTTLVAGLARHGRGEQAVWWLRRMSMEGFCADQATVTT 537

Query: 126 VFKASTALLDVEHGRRCHGL 145
           +         ++ GR C  L
Sbjct: 538 ILHGCNHGGLIDAGRCCFRL 557


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 184/511 (36%), Positives = 277/511 (54%), Gaps = 70/511 (13%)

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           D+   N++L  Y+K+G+++    +F  +     VS+N +IAG+     S++A+E   RM+
Sbjct: 88  DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGRE------------------------------- 359
             GFE  + T +++L AC +  DIK G++                               
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207

Query: 360 ----MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
               +FD M + +V SWN+M+S Y Q+   +   KLF EMQ  G+ PD+ T++ ILS+  
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA-- 265

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
                                            Y +C   + A + F  I E D VCW +
Sbjct: 266 ---------------------------------YFQCGYIDEACKTFREIKEKDKVCWTT 292

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           M+ G + N  + +A + F++M    + P  F+ ++V+SSCA+L+S  QG+ VH +    G
Sbjct: 293 MMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFG 352

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
             +D+ V SAL++MY KCG+   A   F  M  +N ++WN MI GYAQNG   EA+ LY+
Sbjct: 353 VDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYE 412

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
           +M+   +KPD+ITFV +L+AC H+GLV+ G   F S+   HG+ P  DHY+CMI+ LGRA
Sbjct: 413 EMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRA 472

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLA 715
           G+  +A  LI  M  + + +IW  LLS CR++ +V   + AA  LF LDP N+ PY +L+
Sbjct: 473 GYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLS 532

Query: 716 NIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           NIY++ GRW D+ AVR LM  N I K  AYS
Sbjct: 533 NIYAACGRWKDVAAVRSLMKNNKIKKFAAYS 563



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 228/448 (50%), Gaps = 58/448 (12%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           DTFL NRL+ LY+K  N   A+ LFDKM  +D++SWNA+LSA  KS ++E    +FD+M 
Sbjct: 57  DTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMS 116

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
             + VS+N +I+    NG   +AL  + +M  EGF  T  T  SV  A + LLD++ G++
Sbjct: 117 VHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQ 176

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
            HG ++   L ++++V NAL ++YAKCG    A  +F+ M   N V++ +M+SG  +  +
Sbjct: 177 IHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQ 236

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGV---CA---------RE--------------G 235
                ++F  M    +  D V++S++L     C          RE              G
Sbjct: 237 PETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVG 296

Query: 236 C---GVESDVF----------AQSDN-----------KFSRNVHGQQVHCLTIKLGFEAD 271
           C   G E D             + DN           + +    GQ VH   +  G + D
Sbjct: 297 CAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHD 356

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L +S++L+DMY+K G+   A ++F  +  R+V+SWN MI GY Q  +  +A+ L + M  
Sbjct: 357 LLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLH 416

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHK 386
              +PD +T + +L AC+ +G ++ G+  F S+      +P+   ++ M++   ++    
Sbjct: 417 ENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMD 476

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +A+ L + M F   +P+    + +LS C
Sbjct: 477 KAVDLIKSMTF---EPNCLIWSTLLSVC 501



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 224/482 (46%), Gaps = 56/482 (11%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
           + ++ N LL LYAK G    A  +F++MS  +  ++ AM+S  +K+  V    E  R + 
Sbjct: 57  DTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNV----EDLRAVF 112

Query: 214 RKAVSIDSVSLSSVLGVCAREGCG---------VESDVFAQSDNKFSRNVH--------- 255
            +    D+VS ++V+   +  GC          ++ + F  +D      +H         
Sbjct: 113 DQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIK 172

Query: 256 -GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+Q+H   +       + + N+L +MYAK G +D A  +F  +  ++VVSWN MI+GY 
Sbjct: 173 RGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYL 232

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNA 374
           Q  Q     +L   M+S G  PD+VT  N+L A  + G I    + F  +       W  
Sbjct: 233 QNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTT 292

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+   +Q+   ++A+ LFREM    V+PD  T++ ++SSCA +  L  G+ VH  ++   
Sbjct: 293 MMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFG 352

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V+S L+ +YSKC     A  VF R+   +++ WNSMI G + N  D+EA   ++
Sbjct: 353 VDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYE 412

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           +M    + P   +F  VLS+C       +G+     I K                     
Sbjct: 413 EMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISK--------------------- 451

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
            I+G    FD         ++ MI+   + GY D+AV L K M     +P+ + +  +L+
Sbjct: 452 -IHGMNPTFD--------HYSCMINLLGRAGYMDKAVDLIKSMT---FEPNCLIWSTLLS 499

Query: 615 AC 616
            C
Sbjct: 500 VC 501



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 181/408 (44%), Gaps = 58/408 (14%)

Query: 344 MLVACVRSGDIKTGREMFDSM------PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
           +L+ CVRS D+   + +   M      P+ +    N +L  Y++S N  +A  LF +M  
Sbjct: 28  LLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQ-NRLLHLYAKSGNLSDARDLFDKMSR 86

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
           R V                                       +  + ++  YSK    E 
Sbjct: 87  RDV---------------------------------------FSWNAMLSAYSKSGNVED 107

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
              VF ++   D V +N++IAG S N    +A  FF +M++     T ++  +VL +C++
Sbjct: 108 LRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQ 167

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           L    +G+Q+H +I        +FV +AL  MY KCG +  AR  FD M  KN V+WN M
Sbjct: 168 LLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSM 227

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I GY QNG  +   +L+ +M +SG+ PD +T   IL+A    G +D   + F  ++    
Sbjct: 228 ISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDK 287

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK----DDPVIWEVLLSSCRLHANVR-L 692
           V      +T M+    + G   +A +L  EM  +    D+  I  V+ S  RL +  +  
Sbjct: 288 V-----CWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQ 342

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV-RELMSENCI 739
           A      +F +D  +    S L ++YS  G   D   V + +++ N I
Sbjct: 343 AVHGKAVIFGVD-HDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVI 389



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 129/264 (48%), Gaps = 35/264 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  I+   L +  F+ N L  +Y+KC     A+ LFD+M +K++ SWN+++S   +
Sbjct: 174 GKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQ 233

Query: 67  SDDLEFAYKLFDEM-----------------------------------PERNVVSWNNL 91
           +   E   KLF EM                                    E++ V W  +
Sbjct: 234 NGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTM 293

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           +    +NG EE AL ++ +M  E   P + T++SV  +   L  +  G+  HG  +  G+
Sbjct: 294 MVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGV 353

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D ++ V++AL+ +Y+KCG T  A  VF+ M   N +++ +M+ G A+  + +EAL ++  
Sbjct: 354 DHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEE 413

Query: 212 MIRKAVSIDSVSLSSVLGVCAREG 235
           M+ + +  D+++   VL  C   G
Sbjct: 414 MLHENLKPDNITFVGVLSACMHAG 437



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 33/190 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   +  G+  D  + + L+++YSKC  T  A  +F +M  +++ SWN+       
Sbjct: 341 GQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNS------- 393

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I    +NG + +AL++Y +M +E   P +IT   V
Sbjct: 394 ------------------------MILGYAQNGKDLEALALYEEMLHENLKPDNITFVGV 429

Query: 127 FKASTALLDVEHGRRCHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EP 184
             A      VE G+     + KI G++      + +++L  + G+   AV + + M+ EP
Sbjct: 430 LSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEP 489

Query: 185 NEVTFTAMMS 194
           N + ++ ++S
Sbjct: 490 NCLIWSTLLS 499


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 221/699 (31%), Positives = 341/699 (48%), Gaps = 88/699 (12%)

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCGWTKHAVPV 177
           H  L    K++ AL D    R  HG  ++  L       V+NALL+ YA+CG    A   
Sbjct: 48  HFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCG-DLDAALA 106

Query: 178 FEEMSEPN---EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
               + P+    V++ +++S L    R   AL+  R M+     + S +L SVL  C+  
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADH-EVSSFTLVSVLLACSH- 164

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF---EADLHLSNSLLDMYAKNGDMDSA 291
                    A   ++      G++ H   +K GF     +    N+LL MYA+ G +D A
Sbjct: 165 --------LADQGHRL-----GREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDA 211

Query: 292 EVIF--SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
           + +F  S      +V+WN MI+   Q  +  +A+++L  M + G  PD VT  + L AC 
Sbjct: 212 QRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACS 271

Query: 350 RSGDIKTGREM------------------------------------FDSMP--SPSVSS 371
           R   +  GRE+                                    FD +P     +  
Sbjct: 272 RLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGM 331

Query: 372 WNAMLSSYSQSEN-HKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
           WNAM+  Y+Q     +EAI+LF  M+   G  P  TT+A +L +CA   +    + VH  
Sbjct: 332 WNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGY 391

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
            +K     + +V + L+ +Y++  R + A  +F  I   DIV WN++I G  +  L  EA
Sbjct: 392 VVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEA 451

Query: 490 FMFFKQMR--------------------QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           F   ++M+                         P   +  T+L  CA L++  +G+++H 
Sbjct: 452 FQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHG 511

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
              +    +D+ VGSAL++MY KCG +  AR  FD +  +N +TWN +I  Y  +G GDE
Sbjct: 512 YAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDE 571

Query: 590 AVRLYKDMIASG-VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
           A+ L+  M+A+G   P+++TF+A L ACSHSGLVD G+E+F  M+ D+G EP    + C+
Sbjct: 572 ALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACV 631

Query: 649 IDCLGRAGHFHEAEMLIDEM-PCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
           +D LGRAG   EA  +I  M P +     W  +L +CRLH NV+L + AAE LF L+P  
Sbjct: 632 VDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDE 691

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++ Y LL NIYS+ G W++   VR +M +  + K+P  S
Sbjct: 692 ASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCS 730



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 167/596 (28%), Positives = 266/596 (44%), Gaps = 94/596 (15%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPE--RNVVSWNNLISALVRNGLEEKALSVYNKMSNEG 115
           NA+L+A  +  DL+ A  LF   P   R+ VS+N+LISAL        AL     M  + 
Sbjct: 89  NALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADH 148

Query: 116 FVPTHITLASVFKASTALLDVEH--GRRCHGLVIKIG-LDKNI--YVANALLSLYAKCGW 170
            V +  TL SV  A + L D  H  GR  H   +K G LDK    +  NALLS+YA+ G 
Sbjct: 149 EVSS-FTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGL 207

Query: 171 TKHAVPVF--EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
              A  +F        + VT+  M+S L +  R  EA+++   M+   V  D V+ +S L
Sbjct: 208 VDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASAL 267

Query: 229 GVCAR-EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNG 286
             C+R E  GV                 G++VH   +K     A+  ++++L+DMYA N 
Sbjct: 268 PACSRLELLGV-----------------GREVHAFVLKDDDLAANSFVASALVDMYASNE 310

Query: 287 DMDSAEVIFSNLPE--RSVVSWNVMIAGYGQKY-QSTKAIELLQRMKS-CGFEPDEVTSI 342
            +  A  +F  +PE  R +  WN MI GY Q      +AIEL  RM++  G  P E T  
Sbjct: 311 QVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMA 370

Query: 343 NMLVACVRSGDIKTGRE------------------------------------MFDSMPS 366
            +L AC RS ++ TG+E                                    +F  +  
Sbjct: 371 GVLPACARS-EVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDL 429

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQF--------------------RGVKPDRTT 406
             + SWN +++         EA +L REMQ                     +   P+  T
Sbjct: 430 RDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNIT 489

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
           L  +L  CA +     GK++H  +++ A   D  V S L+ +Y+KC    LA  VF R+P
Sbjct: 490 LMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLP 549

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN-EMYPTQFSFATVLSSCAKLSSSFQGR 525
             +++ WN +I    ++ L  EA   F +M  N E  P + +F   L++C+      +G 
Sbjct: 550 RRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGL 609

Query: 526 QVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVT-WNEMI 578
           ++   +++D G+    ++ + ++++  + G +  A      M  G++ V+ W+ M+
Sbjct: 610 ELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTML 665



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 203/489 (41%), Gaps = 109/489 (22%)

Query: 2   KAHVAGKLLHAHILRNGLFD---DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           + H  G+  HA  L++G  D   + F  N L+ +Y++      AQ LF            
Sbjct: 168 QGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLF------------ 215

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
              S+     DL               V+WN +IS LV+ G  E+A+ V   M   G  P
Sbjct: 216 --FSSGAGVGDL---------------VTWNTMISLLVQGGRCEEAVQVLYDMVALGVRP 258

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHAVPV 177
             +T AS   A + L  +  GR  H  V+K   L  N +VA+AL+ +YA      HA  V
Sbjct: 259 DGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRV 318

Query: 178 FEEMSEPNEV--TFTAMMSGLAKTDRV-VEALEMF-RLMIRKAVSIDSVSLSSVLGVCAR 233
           F+ + E       + AM+ G A+   +  EA+E+F R+      +    +++ VL  CAR
Sbjct: 319 FDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACAR 378

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
                 S+VF             + VH   +K    ++  + N+L+DMYA+ G MD A  
Sbjct: 379 ------SEVFTGK----------EAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHT 422

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK----SCGFE-------------- 335
           IF+ +  R +VSWN +I G   +   ++A +L++ M+    +   E              
Sbjct: 423 IFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQR 482

Query: 336 --PDEVTSINMLVAC-----------------------------------VRSGDIKTGR 358
             P+ +T + +L  C                                    + G +   R
Sbjct: 483 CMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALAR 542

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAM 417
            +FD +P  +V +WN ++ +Y       EA+ LF  M   G   P+  T    L++C+  
Sbjct: 543 AVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHS 602

Query: 418 GILESGKQV 426
           G+++ G ++
Sbjct: 603 GLVDRGLEL 611



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 133/276 (48%), Gaps = 16/276 (5%)

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP-DRTTLAIILSSCAAMGILESG 423
           P P  SS    + S + + +H  A++    +        D   L   + S AA+    S 
Sbjct: 11  PQPPTSS---SIRSLTAAGHHAAALRALSSLAASPSSALDHFALPPAIKSAAALRDSRST 67

Query: 424 KQVHAASLKTA--SHIDNYVASGLIGIYSKCQRNELAERVFHRIPE--LDIVCWNSMIAG 479
           + +H ASL+ A        V++ L+  Y++C   + A  +F   P    D V +NS+I+ 
Sbjct: 68  RAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISA 127

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ--GRQVHAQIEKDGYV 537
           L L      A    + M  +    + F+  +VL +C+ L+      GR+ HA   K G++
Sbjct: 128 LCLFRRWGHALDALRDMLADHEV-SSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFL 186

Query: 538 N---DIFVGSALIEMYCKCGDIYGA-RQFFDMMHG-KNTVTWNEMIHGYAQNGYGDEAVR 592
           +   + F  +AL+ MY + G +  A R FF    G  + VTWN MI    Q G  +EAV+
Sbjct: 187 DKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQ 246

Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           +  DM+A GV+PD +TF + L ACS   L+ VG E+
Sbjct: 247 VLYDMVALGVRPDGVTFASALPACSRLELLGVGREV 282



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/342 (21%), Positives = 151/342 (44%), Gaps = 37/342 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H ++++  +  + F+ N L+++Y++      A  +F  +  +DI SWN +++       
Sbjct: 388 VHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGL 447

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           +  A++L  EM   +  +    +       LE    SV      +  +P +ITL ++   
Sbjct: 448 ISEAFQLVREMQLPSSAASGETM-------LEGDDTSV----DGQRCMPNNITLMTLLPG 496

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              L     G+  HG  ++  L+ ++ V +AL+ +YAKCG    A  VF+ +   N +T+
Sbjct: 497 CAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITW 556

Query: 190 TAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGC---GVESDVFAQ 245
             ++          EAL +F R++     + + V+  + L  C+  G    G+E  +F  
Sbjct: 557 NVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLE--LFQG 614

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ERSV 303
               +                GFE   +L   ++D+  + G +D A  I S++   E  V
Sbjct: 615 MKRDY----------------GFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQV 658

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
            +W+ M+ G  + +++ K +  +   +    EPDE +   +L
Sbjct: 659 SAWSTML-GACRLHRNVK-LGRIAAERLFELEPDEASHYVLL 698



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 6/119 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H + +R+ L  D  + + L+++Y+KC     A+ +FD++P +++ +WN ++ A   
Sbjct: 506 GKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGM 565

Query: 67  SDDLEFAYKLFDEM-----PERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPT 119
               + A  LFD M        N V++   ++A   +GL ++ L ++  M  + GF PT
Sbjct: 566 HGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPT 624


>gi|347954476|gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
          Length = 784

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 225/779 (28%), Positives = 361/779 (46%), Gaps = 116/779 (14%)

Query: 6   AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            G+ +HA IL+ G F   + ++  +L+  Y+KC                           
Sbjct: 65  TGQQIHAQILKKGDFYARNEYIETKLVIFYAKC--------------------------- 97

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
               D LE A  LF ++  RNV SW  +I    R GL E AL  + +M   G  P +  +
Sbjct: 98  ----DALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVV 153

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +V KA  AL     GR  HG V K GL   ++VA++L  +Y KCG    A  VF+ + +
Sbjct: 154 PNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPD 213

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V + A+M G  +     EA+ +   M ++ +    V++S+ L   A  G G+E    
Sbjct: 214 RNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMG-GIE---- 268

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q H   I  G   D  L  S+L+ Y   G ++ AE+IF  + E+  
Sbjct: 269 -----------EGKQSHAXXIVNGLXLDNILGTSILNFYCXVGLIEYAEMIFDGMIEKXX 317

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           V+WN++I+GY Q+    +AI + Q M+    + D VT   ++ A   + ++K G+E+   
Sbjct: 318 VTWNLLISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCY 377

Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                           FDS     +  WN +LS+Y+ S    EA
Sbjct: 378 CIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEA 437

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           ++LF EMQ   V P+  T  +I+ S    G +   K++    L+  S           GI
Sbjct: 438 LRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMF---LQMQSS----------GI 484

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           +                   +++ W +M+ GL  N    EA +F ++M+++ + P  F+ 
Sbjct: 485 FP------------------NLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTI 526

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDG-YVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              LS+CA L+S   GR +H  I ++  Y    ++ ++L++MY KCGDI  A + F    
Sbjct: 527 TVALSACANLASLHFGRSIHGYIIRNQQYSFSAWIETSLVDMYAKCGDINKAERVFGSKL 586

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
                 +N MI  YA  G   EA+ LY+ +   GVKPD+IT  ++L+AC++   V+  +E
Sbjct: 587 CSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSACNYGRDVNQAIE 646

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           +F+ M   HG++P L+HY  M+D L  AG   +A  L++EMP K D  + + L  SC   
Sbjct: 647 VFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMVQSLFESCSKQ 706

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
               L +  ++ L   +P NS  Y +++N Y+  G WD++  +RE+M    + K P  S
Sbjct: 707 HKTELVEYLSKHLLESEPDNSGNYVMISNAYAVEGSWDEVAKMREMMKVKGLKKKPGCS 765



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 164/328 (50%), Gaps = 14/328 (4%)

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           D    P  +S+   +SS  ++   +EA+ L  EM +R ++        IL  C     L 
Sbjct: 5   DQARIPLSTSYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLC 64

Query: 422 SGKQVHAASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           +G+Q+HA  LK       + Y+ + L+  Y+KC   E+A+ +F ++   ++  W ++I  
Sbjct: 65  TGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGV 124

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
                L   A M F +M +N ++P  F    V  +C  L  S  GR VH  + K G  + 
Sbjct: 125 KCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHC 184

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           +FV S+L +MY KCG +  AR+ FD +  +N V WN ++ GY QNG  +EA+RL  +M  
Sbjct: 185 VFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRK 244

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVE-----IFNSMQLDHGVEPILDHYTCMIDCLGR 654
            G++P  +T    L+A ++ G ++ G +     I N + LD+ +   + ++ C +     
Sbjct: 245 EGIEPTRVTVSTCLSASANMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCXV----- 299

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            G    AEM+ D M  +   V W +L+S
Sbjct: 300 -GLIEYAEMIFDGM-IEKXXVTWNLLIS 325


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 219/786 (27%), Positives = 362/786 (46%), Gaps = 98/786 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  ILRNG+    FL  RL+ +Y KC +   A+                       
Sbjct: 59  GRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEAR----------------------- 95

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +F  + +++VV+W +LI    R+G  ++A  ++ +M  +G +P  +T  +V
Sbjct: 96  --------AVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAV 147

Query: 127 FKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A     +V+  R     V   G L+ ++ VA A+++ Y KCG    A  VF+ +   +
Sbjct: 148 LGACGHPWEVDTIR---ARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRD 204

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
              + AM+S L   ++  EALE+FR M    V+ +  +  + L  C              
Sbjct: 205 AAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCH------------ 252

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
               FS  +   ++H    +L  +AD  +  +L++MY K G +D AE IF  + ER VVS
Sbjct: 253 -SRDFSEAL---RIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVS 308

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG-------- 357
           WN M+          KA +  + M   G  P  +T + +L AC  +  +K G        
Sbjct: 309 WNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAV 368

Query: 358 ---------------------------REMFDS-------MPSPSVSSWNAMLSSYSQSE 383
                                      +  F S          PS+  WN +LS Y ++E
Sbjct: 369 EGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENE 428

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY--V 441
             +EA  +FR M   GV  D  +L  + ++C +   LE GK +H  SL T S +     V
Sbjct: 429 QFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIH--SLLTESELTRKTPV 486

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + L+ +Y++    E A  +F  +   +++ W +M+   S   L+ EA   F+ +    +
Sbjct: 487 QNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGV 546

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P + +F  VL++C  L+S    + V A + + G+  ++ V + L+    KCG +     
Sbjct: 547 APNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVAN 606

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
           FF +M  KN V+WN  I   AQ+G G   V L++ M   G+    +T + +L++CSH+GL
Sbjct: 607 FFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGL 666

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI-WEVL 680
           V  G   F +M +D+G     +HY+C+ID L RAG    AE  +  +P  D  V  W  L
Sbjct: 667 VAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITL 726

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           L  C+LH ++    RA + +  L+P ++ PY ++ N+Y+  G+W +  AVR+ M E    
Sbjct: 727 LCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPK 786

Query: 741 KDPAYS 746
           K+P  S
Sbjct: 787 KEPGLS 792



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/610 (25%), Positives = 282/610 (46%), Gaps = 62/610 (10%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T A++      L D+  GRR HGL+++ G++   ++   LL++Y KCG  + A  VF+ +
Sbjct: 42  TFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGI 101

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + + V +T+++   A++    EA  +FR M  + V  + V+  +VLG C   G   E D
Sbjct: 102 QDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGAC---GHPWEVD 158

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                       +  +   C +++L    D+ ++ ++++ Y K GD+DSA  +F  +  R
Sbjct: 159 -----------TIRARVEACGSLEL----DVIVATAVMNAYGKCGDLDSAWGVFDGILVR 203

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS---------- 351
               WN MI+      Q  +A+EL ++M+  G  P++ T +  L AC  S          
Sbjct: 204 DAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIH 263

Query: 352 -------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                    G +    E+F+ +    V SWNAML++ + +  H 
Sbjct: 264 AFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHD 323

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI---DNYVAS 443
           +A K FREM   G  P R T   IL++C     L+ G  V   +++    I   D  + +
Sbjct: 324 KAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGT 383

Query: 444 GLIGIYSKCQRNELAER----VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            ++ +YS+C+  + A      +     +  I+ WN++++    N    EAF  F+ M   
Sbjct: 384 AIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLG 443

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
            +     S  TV ++C   +S  +G+ +H+ + +        V +AL+ MY + G +  A
Sbjct: 444 GVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDA 503

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           R+ FD M  +N ++W  M+  ++Q G   EA+R+++ ++  GV P+++TF A+L AC + 
Sbjct: 504 REIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNL 563

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
             +    ++  +   + G    ++    ++  LG+ G   E       M  K+  V W  
Sbjct: 564 ASIPA-AKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQ-VSWNT 621

Query: 680 LLSSCRLHAN 689
            +++   H N
Sbjct: 622 AIAANAQHGN 631



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 141/283 (49%), Gaps = 8/283 (2%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D +T A ++  CA +  L  G+++H   L+    + +++ + L+ +Y KC   E A  VF
Sbjct: 39  DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             I +  +V W S+I   + +    EAF  F++M+   + P   ++  VL +C      +
Sbjct: 99  QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGH---PW 155

Query: 523 QGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
           +   + A++E  G +  D+ V +A++  Y KCGD+  A   FD +  ++   WN MI   
Sbjct: 156 EVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLL 215

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN-SMQLDHGVEP 640
             +  GDEA+ L++ M   GV P+  T VA L AC HS      + I   + +L    + 
Sbjct: 216 VAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADT 275

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           ++   T +++  G+ G   +AE + + +  + D V W  +L++
Sbjct: 276 VVQ--TALVNMYGKFGKVDDAEEIFERIQ-ERDVVSWNAMLTA 315



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 14/199 (7%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +FA ++  CA+L    QGR++H  I ++G     F+G+ L+ MYCKCG    AR  F  +
Sbjct: 42  TFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGI 101

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV-- 624
             K+ V W  +I   A++G+  EA  L+++M   GV P+D+T+VA+L AC H   VD   
Sbjct: 102 QDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIR 161

Query: 625 -GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             VE   S++LD  V       T +++  G+ G    A  + D +  + D  +W  ++S 
Sbjct: 162 ARVEACGSLELDVIVA------TAVMNAYGKCGDLDSAWGVFDGILVR-DAAVWNAMISL 214

Query: 684 CRLHANVRLAKRAAEELFR 702
              H         A ELFR
Sbjct: 215 LVAHEQ----GDEALELFR 229


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 213/664 (32%), Positives = 331/664 (49%), Gaps = 77/664 (11%)

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           ++V+WN  IS+ +RNG  + AL V+N M     V  +  ++                   
Sbjct: 45  DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISG------------------ 86

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
                       Y+ NA  SL         A  +F++M E +  ++  M++G  +  R+ 
Sbjct: 87  ------------YLRNAKFSL---------ARDLFDKMPERDLFSWNVMLTGYVRNRRLG 125

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           EA ++F LM +K    D VS +++L   A+ G   E+           R V  +  H  +
Sbjct: 126 EAHKLFDLMPKK----DVVSWNAMLSGYAQNGFVDEA-----------REVFNKMPHRNS 170

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
           I           N LL  Y  NG +  A  +F +     ++SWN ++ GY ++     A 
Sbjct: 171 ISW---------NGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDAR 221

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
           +L  RM       D ++   M+    + GD+   + +F+  P   V +W AM+S Y Q+ 
Sbjct: 222 QLFDRMPV----RDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNG 277

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA- 442
              EA K F EM  +        LA         G ++  K V A  L  A    N  + 
Sbjct: 278 MVDEARKYFDEMPVKNEISYNAMLA---------GYVQYKKMVIAGELFEAMPCRNISSW 328

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + +I  Y +      A ++F  +P+ D V W ++I+G + N    EA   F +M+++   
Sbjct: 329 NTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGES 388

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
             + +F+  LS+CA +++   G+QVH Q+ K G+    FVG+AL+ MY KCG    A   
Sbjct: 389 SNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDV 448

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F+ +  K+ V+WN MI GYA++G+G +A+ L++ M  +GVKPD+IT V +L+ACSHSGL+
Sbjct: 449 FEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLI 508

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D G E F SM  D+ V+P   HYTCMID LGRAG   EAE L+  MP       W  LL 
Sbjct: 509 DRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLG 568

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           + R+H N  L ++AAE +F+++P+NS  Y LL+N+Y++ GRW D+  +R  M E  + K 
Sbjct: 569 ASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKV 628

Query: 743 PAYS 746
             YS
Sbjct: 629 TGYS 632



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 254/515 (49%), Gaps = 40/515 (7%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           D    N+ I  + +  +  SA  +F+ MP +   S+NA++S   ++     A  LFD+MP
Sbjct: 45  DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
           ER++ SWN +++  VRN    +A  +++ M  +  V  +  L+    A    +D      
Sbjct: 105 ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGY--AQNGFVDEARE-- 160

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
               V      +N    N LL+ Y   G  K A  +FE  S    +++  +M G  K + 
Sbjct: 161 ----VFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNM 216

Query: 202 VVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
           + +A ++F R+ +R     D +S ++++   A+ G        +Q+   F+ +       
Sbjct: 217 LGDARQLFDRMPVR-----DVISWNTMISGYAQVG------DLSQAKRLFNES------- 258

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
              I+     D+    +++  Y +NG +D A   F  +P ++ +S+N M+AGY Q  +  
Sbjct: 259 --PIR-----DVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMV 311

Query: 321 KAIELLQRMKSCGFEPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
            A EL + M         ++S N M+    ++G I   R++FD MP     SW A++S Y
Sbjct: 312 IAGELFEAMPC-----RNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGY 366

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           +Q+ +++EA+ +F EM+  G   +R+T +  LS+CA +  LE GKQVH   +K       
Sbjct: 367 AQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGC 426

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           +V + L+G+Y KC   + A  VF  I E D+V WN+MIAG + +    +A + F+ M++ 
Sbjct: 427 FVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKA 486

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
            + P + +   VLS+C+      +G +    +++D
Sbjct: 487 GVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRD 521



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 224/507 (44%), Gaps = 91/507 (17%)

Query: 3   AHVAGKLLHAHI-LRNGLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYS 56
           A ++G L +A   L   LFD     D F  N ++  Y +      A  LFD MP KD+ S
Sbjct: 82  AMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVS 141

Query: 57  WNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN--- 113
           WNA+LS   ++  ++ A ++F++MP RN +SWN L++A V NG  ++A  ++   SN   
Sbjct: 142 WNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWEL 201

Query: 114 -------EGFVPTH-----------------ITLASVFKASTALLDVEHGRRCHGLVIKI 149
                   G+V  +                 I+  ++      + D+   +R    +   
Sbjct: 202 ISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKR----LFNE 257

Query: 150 GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
              ++++   A++S Y + G    A   F+EM   NE+++ AM++G  +  ++V A E+F
Sbjct: 258 SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELF 317

Query: 210 RLMIRKAVSI---------------------------DSVSLSSVLGVCAREG------- 235
             M  + +S                            D VS ++++   A+ G       
Sbjct: 318 EAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALN 377

Query: 236 CGVESDVFAQSDNKFSRNVH------------GQQVHCLTIKLGFEADLHLSNSLLDMYA 283
             VE     +S N+ + +              G+QVH   +K GFE    + N+LL MY 
Sbjct: 378 MFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYF 437

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K G  D A  +F  + E+ VVSWN MIAGY +     +A+ L + MK  G +PDE+T + 
Sbjct: 438 KCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVG 497

Query: 344 MLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           +L AC  SG I  G E F SM       P+   +  M+    ++   +EA  L R M F 
Sbjct: 498 VLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPF- 556

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQ 425
              P   +   +L +    G  E G++
Sbjct: 557 --DPGAASWGALLGASRIHGNTELGEK 581



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 150/309 (48%), Gaps = 21/309 (6%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N ++  Y +      A  LF+ MP ++I SWN +++   ++  +  A KLFD MP+R+ V
Sbjct: 298 NAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCV 357

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  +IS   +NG  E+AL+++ +M  +G      T +        +  +E G++ HG V
Sbjct: 358 SWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQV 417

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K G +   +V NALL +Y KCG T  A  VFE + E + V++  M++G A+     +AL
Sbjct: 418 VKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQAL 477

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
            +F  M +  V  D +++  VL  C+  G     ++ F   D  ++     +   C    
Sbjct: 478 VLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTC---- 533

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVSWNVMIAG---YGQKYQSTK 321
                       ++D+  + G ++ AE +  N+P +    SW  ++     +G      K
Sbjct: 534 ------------MIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEK 581

Query: 322 AIELLQRMK 330
           A E++ +M+
Sbjct: 582 AAEMVFKME 590



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 214/452 (47%), Gaps = 45/452 (9%)

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           + D+   N  +  + +NG  DSA  +F+++P RS VS+N MI+GY +  + + A +L  +
Sbjct: 43  DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDK 102

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
           M     E D  +   ML   VR+  +    ++FD MP   V SWNAMLS Y+Q+    EA
Sbjct: 103 MP----ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEA 158

Query: 389 IKLFREMQFRGVKPDRTTLAI--ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
            ++F +M      P R +++   +L++    G L+  +++     ++ S+ +    + L+
Sbjct: 159 REVFNKM------PHRNSISWNGLLAAYVHNGRLKEARRL----FESQSNWELISWNCLM 208

Query: 447 GIYSKCQRNEL--AERVFHRIPELDIVCWNSMIAGLS-----------LNSLDIEAFMFF 493
           G Y K  RN L  A ++F R+P  D++ WN+MI+G +            N   I     +
Sbjct: 209 GGYVK--RNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTW 266

Query: 494 KQM----RQNEM------YPTQFSFATVLSSCAKLSSSFQGRQ--VHAQIEKDGYVNDIF 541
             M     QN M      Y  +      +S  A L+   Q ++  +  ++ +     +I 
Sbjct: 267 TAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNIS 326

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
             + +I  Y + G I  AR+ FDMM  ++ V+W  +I GYAQNG+ +EA+ ++ +M   G
Sbjct: 327 SWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDG 386

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
              +  TF   L+ C+    +++G ++   + +  G E        ++    + G   EA
Sbjct: 387 ESSNRSTFSCALSTCADIAALELGKQVHGQV-VKAGFETGCFVGNALLGMYFKCGSTDEA 445

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
             + + +  K D V W  +++    H   R A
Sbjct: 446 NDVFEGIEEK-DVVSWNTMIAGYARHGFGRQA 476


>gi|347954482|gb|AEP33741.1| chlororespiratory reduction 21, partial [Thlaspi arvense]
          Length = 732

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 226/747 (30%), Positives = 352/747 (47%), Gaps = 116/747 (15%)

Query: 1   KKAHVAGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           K+    GK +HA IL+ G F   + ++  +L+  Y+KC                      
Sbjct: 63  KRNLCTGKQIHARILKKGDFYARNEYIETKLVIFYAKC---------------------- 100

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
                    D LE A  LF ++  RNV SW  +I    R GL E AL  + +M   G  P
Sbjct: 101 ---------DALEIAELLFSKLRVRNVFSWAAIIGVKCRIGLVEGALMGFVEMLENGIFP 151

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
            +  + +V KA  AL     GR  HG V+K G    ++VA++L  +Y KCG    A  VF
Sbjct: 152 DNFVVPNVCKACGALQWSRFGRGVHGYVVKAGFHDCVFVASSLADMYGKCGVLDEARKVF 211

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           +E+ E N V + A+M G  +     EA+ +F  M ++ V    V++S+ L   A  G G+
Sbjct: 212 DEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMG-GI 270

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
           E                G+Q H + +  G E D  L  S+L+ Y K G ++ AE+IF  +
Sbjct: 271 E---------------EGKQSHAIAVVNGLELDNILGTSILNFYCKVGLIECAEMIFDRM 315

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
            E+ VV+WN++I+GY Q+     AI + Q M+    + D VT   ++ A  R+ D K G+
Sbjct: 316 VEKDVVTWNLLISGYVQQGLVEDAIRMCQSMRLENLKFDCVTLSTLMSAAARTQDSKLGK 375

Query: 359 EM-----------------------------------FDSMPSPSVSSWNAMLSSYSQSE 383
           E+                                   FDS     +  WN +L +Y++S 
Sbjct: 376 EVQSYCIRHSLESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLGAYAESG 435

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
              EA++LF EMQ   V P+  T  +I+ S    G +   K++    L+  S       S
Sbjct: 436 LSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMF---LQMQS-------S 485

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           G+I                   P L  V W +M+ GL  N    EA +F ++M+++ + P
Sbjct: 486 GII-------------------PNL--VSWTTMMNGLVQNGCSEEAILFLRKMQESGLRP 524

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG-YVNDIFVGSALIEMYCKCGDIYGARQF 562
             FS    LS+CA L+S   GR +H  I ++  + + + + ++L++MY KCGDI  A + 
Sbjct: 525 NVFSITVALSACANLASLHYGRSIHGYIIRNQRHCSSVSIETSLVDMYAKCGDINKAERV 584

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F          +N MI G+A  G   EA+ LY+ +   G+KPD ITF ++L+AC+H+G +
Sbjct: 585 FRSKLYSELPLYNAMISGFAVYGNVKEAIGLYRSLEDMGIKPDSITFTSLLSACNHAGDI 644

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           +   EIF  M   HG++P L+HY  M+D L  AG   +A  L++EMP K D  + + L +
Sbjct: 645 NQAFEIFTDMVSKHGLKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMVQSLFA 704

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSA 709
           +C+      L +  + +L   +P NS 
Sbjct: 705 TCKKQHKDELVEYLSRQLLESEPDNSG 731



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 245/514 (47%), Gaps = 56/514 (10%)

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           +S L K+  + EAL +   M  + + I       +L     +GC             + R
Sbjct: 22  VSSLCKSGEIREALSLVTEMDFRKIRIGPEIYGEIL-----QGC------------VYKR 64

Query: 253 NV-HGQQVHCLTIKLG--FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
           N+  G+Q+H   +K G  +  + ++   L+  YAK   ++ AE++FS L  R+V SW  +
Sbjct: 65  NLCTGKQIHARILKKGDFYARNEYIETKLVIFYAKCDALEIAELLFSKLRVRNVFSWAAI 124

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------------- 349
           I    +      A+     M   G  PD     N+  AC                     
Sbjct: 125 IGVKCRIGLVEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGF 184

Query: 350 ---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + G +   R++FD +P  +V +WNA++  Y Q+  ++EAI+LF +
Sbjct: 185 HDCVFVASSLADMYGKCGVLDEARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSD 244

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+  GV+P R T++  LS+ A MG +E GKQ HA ++     +DN + + ++  Y K   
Sbjct: 245 MRKEGVEPTRVTVSTCLSASANMGGIEEGKQSHAIAVVNGLELDNILGTSILNFYCKVGL 304

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E AE +F R+ E D+V WN +I+G     L  +A    + MR   +     + +T++S+
Sbjct: 305 IECAEMIFDRMVEKDVVTWNLLISGYVQQGLVEDAIRMCQSMRLENLKFDCVTLSTLMSA 364

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
            A+   S  G++V +   +    +DI + S  ++MY KCG I  A++ FD    K+ + W
Sbjct: 365 AARTQDSKLGKEVQSYCIRHSLESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILW 424

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N ++  YA++G   EA+RL+ +M    V P+ IT+  I+ +   +G V+   E+F  MQ 
Sbjct: 425 NTLLGAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQ- 483

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
             G+ P L  +T M++ L + G   EA + + +M
Sbjct: 484 SSGIIPNLVSWTTMMNGLVQNGCSEEAILFLRKM 517



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 190/381 (49%), Gaps = 16/381 (4%)

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           D   + S +S+   +SS  +S   +EA+ L  EM FR ++        IL  C     L 
Sbjct: 8   DQARNRSSTSYFHRVSSLCKSGEIREALSLVTEMDFRKIRIGPEIYGEILQGCVYKRNLC 67

Query: 422 SGKQVHAASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           +GKQ+HA  LK       + Y+ + L+  Y+KC   E+AE +F ++   ++  W ++I  
Sbjct: 68  TGKQIHARILKKGDFYARNEYIETKLVIFYAKCDALEIAELLFSKLRVRNVFSWAAIIGV 127

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
                L   A M F +M +N ++P  F    V  +C  L  S  GR VH  + K G+ + 
Sbjct: 128 KCRIGLVEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGFHDC 187

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           +FV S+L +MY KCG +  AR+ FD +  +N V WN ++ GY QNG  +EA+RL+ DM  
Sbjct: 188 VFVASSLADMYGKCGVLDEARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRK 247

Query: 600 SGVKPDDITFVAILTACSHSGLVDVG-----VEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
            GV+P  +T    L+A ++ G ++ G     + + N ++LD+ +   + ++ C      +
Sbjct: 248 EGVEPTRVTVSTCLSASANMGGIEEGKQSHAIAVVNGLELDNILGTSILNFYC------K 301

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
            G    AEM+ D M  + D V W +L+S       V  A R  + + RL+       + L
Sbjct: 302 VGLIECAEMIFDRM-VEKDVVTWNLLISGYVQQGLVEDAIRMCQSM-RLENLKFDCVT-L 358

Query: 715 ANIYSSLGRWDDLRAVRELMS 735
           + + S+  R  D +  +E+ S
Sbjct: 359 STLMSAAARTQDSKLGKEVQS 379



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 193/401 (48%), Gaps = 6/401 (1%)

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
           +  +E     +++   +   ++    +F  +   +V SW A++    +    + A+  F 
Sbjct: 83  YARNEYIETKLVIFYAKCDALEIAELLFSKLRVRNVFSWAAIIGVKCRIGLVEGALMGFV 142

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           EM   G+ PD   +  +  +C A+     G+ VH   +K   H   +VAS L  +Y KC 
Sbjct: 143 EMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGFHDCVFVASSLADMYGKCG 202

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
             + A +VF  IPE ++V WN+++ G   N ++ EA   F  MR+  + PT+ + +T LS
Sbjct: 203 VLDEARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLS 262

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           + A +    +G+Q HA    +G   D  +G++++  YCK G I  A   FD M  K+ VT
Sbjct: 263 ASANMGGIEEGKQSHAIAVVNGLELDNILGTSILNFYCKVGLIECAEMIFDRMVEKDVVT 322

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN +I GY Q G  ++A+R+ + M    +K D +T   +++A + +    +G E+  S  
Sbjct: 323 WNLLISGYVQQGLVEDAIRMCQSMRLENLKFDCVTLSTLMSAAARTQDSKLGKEV-QSYC 381

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
           + H +E  +   +  +D   + G   +A+ + D    + D ++W  LL +   +A   L+
Sbjct: 382 IRHSLESDIVLASTAVDMYAKCGSIVDAKKVFDS-TVQKDLILWNTLLGA---YAESGLS 437

Query: 694 KRAAEELFRLDPKNSAPYSLLAN-IYSSLGRWDDLRAVREL 733
             A    + +  ++  P  +  N I  SL R   +   +E+
Sbjct: 438 GEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEM 478


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 198/608 (32%), Positives = 302/608 (49%), Gaps = 58/608 (9%)

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M + N V++ +++SG  +     E + +F+      + +D  + S+ L VC R       
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR------- 53

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                 D +      G+ +H L    G    + L+NSL+DMY K G +D A ++F +  E
Sbjct: 54  ----TLDLRL-----GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADE 104

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRM----------------KSCG----------- 333
              VSWN +IAGY +   + + + LL +M                K+CG           
Sbjct: 105 LDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGK 164

Query: 334 ----------FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                      + D V    +L    + GD++   ++F  MP P+V  +NAM++ + Q E
Sbjct: 165 MLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQME 224

Query: 384 NH-----KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
                   EA+ LF EMQ RG+KP   T + IL +C+ +   E GKQ+HA   K     D
Sbjct: 225 TMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSD 284

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
            ++ + L+ +YS     E   + FH  P+LD+V W S+I G   N         F ++  
Sbjct: 285 EFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLF 344

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
           +   P +F+ + +LS+CA L++   G Q+HA   K G  N   + ++ I MY KCGDI  
Sbjct: 345 SGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDS 404

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A   F      + V+W+ MI   AQ+G   EAV L++ M  SG+ P+ ITF+ +L ACSH
Sbjct: 405 ANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSH 464

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
            GLV+ G+  F  M+ DHG+ P + H  C++D LGRAG   EAE  I +   + DPV+W 
Sbjct: 465 GGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWR 524

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC 738
            LLS+CR+H      KR AE +  L+P+ +A Y LL NIY+  G       +R LM +  
Sbjct: 525 SLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRG 584

Query: 739 IVKDPAYS 746
           + K+P  S
Sbjct: 585 VKKEPGLS 592



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 162/609 (26%), Positives = 286/609 (46%), Gaps = 64/609 (10%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           MP+RNVVSWN+LIS   + G   + ++++ +           T ++        LD+  G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           R  H L+   GL   + + N+L+ +Y KCG    A  VFE   E + V++ ++++G  + 
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQ 258
               E L +   M+R  ++++S +L S L  C                + FS ++  G+ 
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACG---------------SNFSSSIECGKM 165

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +H   +KLG + D+ +  +LLD YAK GD++ A  IF  +P+ +VV +N MIAG+ Q   
Sbjct: 166 LHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMET 225

Query: 319 -----STKAIELLQRMKSCGFEPDEVTSINMLVACVR----------------------- 350
                + +A+ L   M+S G +P E T  ++L AC                         
Sbjct: 226 MADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDE 285

Query: 351 ------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                       SG I+ G + F S P   V SW +++  + Q+   +  + LF E+ F 
Sbjct: 286 FIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFS 345

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G KPD  T++I+LS+CA +  ++SG+Q+HA ++KT       + +  I +Y+KC   + A
Sbjct: 346 GRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA 405

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
              F      DIV W+ MI+  + +    EA   F+ M+ + + P   +F  VL +C+  
Sbjct: 406 NMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHG 465

Query: 519 SSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNE 576
               +G +    ++KD G   ++   + ++++  + G +  A  F  D     + V W  
Sbjct: 466 GLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRS 525

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPD-DITFVAILTACSHSGLVDVGVEIFNSMQLD 635
           ++     +   D   R+ + +I   ++P+   ++V +    + +G+     EI N M+ D
Sbjct: 526 LLSACRVHKATDTGKRVAERVIE--LEPEAAASYVLLYNIYNDAGIQMPATEIRNLMK-D 582

Query: 636 HGV--EPIL 642
            GV  EP L
Sbjct: 583 RGVKKEPGL 591



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 199/459 (43%), Gaps = 89/459 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+HA I  +GL     L N LI++Y KC                              
Sbjct: 60  GRLIHALITVSGLGGPVLLTNSLIDMYCKCGR---------------------------- 91

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +++A  +F+   E + VSWN+LI+  VR G  ++ L +  KM   G       L S 
Sbjct: 92  ---IDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSA 148

Query: 127 FKA--STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            KA  S     +E G+  HG  +K+GLD ++ V  ALL  YAK G  + A  +F+ M +P
Sbjct: 149 LKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDP 208

Query: 185 NEVTFTAMMSGLAKTDRVV-----EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           N V + AM++G  + + +      EA+ +F  M  + +     + SS+L  C+       
Sbjct: 209 NVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACS------T 262

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
            + F            G+Q+H    K   ++D  + N+L+++Y+ +G ++     F + P
Sbjct: 263 IEAFEC----------GKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP 312

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------- 348
           +  VVSW  +I G+ Q  Q    + L   +   G +PDE T   ML AC           
Sbjct: 313 KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQ 372

Query: 349 ------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                    + GDI +    F    +P + SW+ M+SS +Q   
Sbjct: 373 IHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGC 432

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            KEA+ LF  M+  G+ P+  T   +L +C+  G++E G
Sbjct: 433 AKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEG 471



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 36/289 (12%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   GK +HA I +  L  D F+ N L+ELYS   +       F   P  D+ SW +  
Sbjct: 264 EAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTS-- 321

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                        LI   V+NG  E  L++++++   G  P   
Sbjct: 322 -----------------------------LIVGHVQNGQFEGGLTLFHELLFSGRKPDEF 352

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T++ +  A   L  V+ G + H   IK G+     + N+ + +YAKCG    A   F+E 
Sbjct: 353 TISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKET 412

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC---GV 238
             P+ V+++ M+S  A+     EA+++F LM    ++ + ++   VL  C+  G    G+
Sbjct: 413 KNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGL 472

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
                 + D+  + NV  +   C+   LG    L  + S +      GD
Sbjct: 473 RYFEIMKKDHGITPNV--KHSACIVDLLGRAGRLAEAESFIMDSGFEGD 519


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 213/693 (30%), Positives = 344/693 (49%), Gaps = 105/693 (15%)

Query: 118 PTHITLASVFKASTALL----DVEHGR----RCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           P  ++L+++ +  T LL    +  +GR      H  VIK GL  ++Y+ N L+++Y+K G
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS--- 226
           +  HA  +F+EM      ++  ++S  +K   +    E F  + ++    DSVS ++   
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR----DSVSWTTMIV 119

Query: 227 -------------VLGVCAREGCGVESDVFAQSDNKFSRNVH-----GQQVHCLTIKLGF 268
                        V+G   +EG  +E   F  ++   S         G++VH   +KLG 
Sbjct: 120 GYKNIGQYHKAIRVMGDMVKEG--IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGL 177

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
             ++ +SNSLL+MYAK GD   A+ +F  +  R + SWN MIA + Q             
Sbjct: 178 RGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQ------------- 224

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                  G +      F+ M    + +WN+M+S ++Q      A
Sbjct: 225 ----------------------VGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262

Query: 389 IKLFREMQFRGV-KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           + +F +M    +  PDR TLA +LS+CA +  L  GKQ+H+  + T   I   V + LI 
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322

Query: 448 IYSKCQRNELAER---------------------------------VFHRIPELDIVCWN 474
           +YS+C   E A R                                 +F  + + D+V W 
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           +MI G   +    EA   F+ M      P  ++ A +LS  + L+S   G+Q+H    K 
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH-GKNTVTWNEMIHGYAQNGYGDEAVRL 593
           G +  + V +ALI MY K G+I  A + FD++   ++TV+W  MI   AQ+G+ +EA+ L
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           ++ M+  G++PD IT+V + +AC+H+GLV+ G + F+ M+    + P L HY CM+D  G
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           RAG   EA+  I++MP + D V W  LLS+CR+H N+ L K AAE L  L+P+NS  YS 
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LAN+YS+ G+W++   +R+ M +  + K+  +S
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 265/563 (47%), Gaps = 91/563 (16%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
             +L+H  ++++GL    +L N L+ +YSK      A+ LFD+MP +  +SWN +LSA  
Sbjct: 32  TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K  D++   + FD++P+R+ VSW  +I      G   KA+ V   M  EG  PT  TL +
Sbjct: 92  KRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------------- 169
           V  +  A   +E G++ H  ++K+GL  N+ V+N+LL++YAKCG                
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211

Query: 170 ---WTKH------------AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              W               A+  FE+M+E + VT+ +M+SG  +    + AL++F  M+R
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271

Query: 215 KA-VSIDSVSLSSVLGVCAR----------------EGCGVESDVFAQSDNKFSRNVHGQ 257
            + +S D  +L+SVL  CA                  G  +   V     + +SR    +
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331

Query: 258 QVHCLTIKLGFEADLHLS--NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
               L  + G + DL +    +LLD Y K GDM+ A+ IF +L +R VV+W  MI GY Q
Sbjct: 332 TARRLIEQRGTK-DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390

Query: 316 KYQSTKAIELLQRMKSCGFEPD-------------------------------EVTSINM 344
                +AI L + M   G  P+                               E+ S+++
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 450

Query: 345 LVACV----RSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
             A +    ++G+I +    FD +       SW +M+ + +Q  + +EA++LF  M   G
Sbjct: 451 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQRNEL 457
           ++PD  T   + S+C   G++  G+Q +   +K    I   ++  + ++ ++ +    + 
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQ-YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569

Query: 458 AERVFHRIP-ELDIVCWNSMIAG 479
           A+    ++P E D+V W S+++ 
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSA 592


>gi|296085462|emb|CBI29194.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 222/769 (28%), Positives = 377/769 (49%), Gaps = 88/769 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G++LH    + GL  D+FLCN LI++Y+KC    S++ +F  M +               
Sbjct: 133 GRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEY--------------- 177

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                           R+++SWN+++     N   +K+L  + KM+       +++L   
Sbjct: 178 ----------------RDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCA 221

Query: 127 FKASTALLDVEHGRRCHGLVIKIG---LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
             AS  L ++  G+  HG  IK+G   +  N +  N+L+SLY++C   + A  +F+EM  
Sbjct: 222 VSASALLGELSFGQVIHGWGIKLGYKDISHNSF-ENSLISLYSQCRDIQAAEILFKEMKY 280

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCA-----REGCG 237
            + V++ AM+ GLA   R+ EA ++   M +   V  DSV++  ++ +CA     REG  
Sbjct: 281 KDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREG-- 338

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---------NGDM 288
                         R VHG     LT++     D  ++NSL+DMY+K         NG  
Sbjct: 339 --------------RAVHG-----LTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHNGHS 379

Query: 289 DSAEVIFSNLPER-SVVSWNVMIAGYGQKYQSTKAIELLQRMKSC-------GFEPDEVT 340
             A+ +F  L +  S  S + ++A       S  + E LQ  +S        GF  + + 
Sbjct: 380 REAQHLFRQLLQSYSQCSLSTLLA----ILPSCDSSEFLQFGESIHCWQLKLGFANNPLA 435

Query: 341 SINMLVACVRSGDIKTGREMFDSMPSPS-VSSWNAMLSSYSQSENHKEAIKLFREM-QFR 398
             ++++  +  GD+     +  ++ + + +  WN +++  +Q+ +  EA+K F  M Q  
Sbjct: 436 VNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDP 495

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
            V  D   L  ++S+C  + +L +G  +H  +LKT    D  V + LI +Y +C   E A
Sbjct: 496 DVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENA 555

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
             +F      ++  WN MI+  S N     A   F  +   E  P + +   +LS+C +L
Sbjct: 556 RIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHI---EFEPNEITIVGILSACTQL 612

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
                G+Q+H  + +     + FV +AL +MY  CG +  A Q F     ++   WN MI
Sbjct: 613 GVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMI 672

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
             +  +  G +A+ L+ +M   G +P   TF+++L+ACSHSGLV+ G+  +++M     V
Sbjct: 673 SAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNV 732

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
           E   +H+ CM+D LGRAG   EA   I +MP + +P +W  LLS+C  H ++++ +  AE
Sbjct: 733 EADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGREVAE 792

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            LF L+P+N   Y  L+N+Y + GRW D   +R ++ +  + K  AYSL
Sbjct: 793 LLFELEPENVGYYISLSNMYVAAGRWKDAVELRRIIQDKGLKKPAAYSL 841



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 171/589 (29%), Positives = 290/589 (49%), Gaps = 37/589 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            ++L+A  ++ D   ++ LFDE+  R+V+ WN +I+A V N     A++++ ++  EG  
Sbjct: 52  TSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGVG 111

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
               TL  V  AS+ + ++  GR  HG+  K GL  + ++ NAL+ +YAKCG    +  V
Sbjct: 112 LDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECV 171

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  M   + +++ +MM G A  +   ++L  F+ M   +   D+VSL+  +   A  G  
Sbjct: 172 FGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLG-- 229

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH--LSNSLLDMYAKNGDMDSAEVIF 295
                    +  F     GQ +H   IKLG++   H    NSL+ +Y++  D+ +AE++F
Sbjct: 230 ---------ELSF-----GQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILF 275

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDI 354
             +  + +VSWN M+ G     +  +A +LL  M+  G  +PD VT + ++  C     +
Sbjct: 276 KEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLL 335

Query: 355 KTGREM----FDSMPSPSVSSWNAMLSSYSQSENHK---------EAIKLFREMQFRGVK 401
           + GR +             S  N+++  YS+ ++ K         EA  LFR++     +
Sbjct: 336 REGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHNGHSREAQHLFRQLLQSYSQ 395

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
              +TL  IL SC +   L+ G+ +H   LK     +    + L+ +Y  C        +
Sbjct: 396 CSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSL 455

Query: 462 FHRI-PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN-EMYPTQFSFATVLSSCAKLS 519
              +    DIVCWN+++AG + N    EA   F  MRQ+ ++     +   V+S+C  L 
Sbjct: 456 LQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLE 515

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
             F G  +H    K    +DI V +ALI MY +CG+I  AR  F     +N  +WN MI 
Sbjct: 516 LLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMIS 575

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            ++QN  G  A+ L+  +     +P++IT V IL+AC+  G++  G +I
Sbjct: 576 AFSQNKDGRRALELFCHI---EFEPNEITIVGILSACTQLGVLRHGKQI 621



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 171/342 (50%), Gaps = 15/342 (4%)

Query: 340 TSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           TS ++L A  R+ D  +   +FD +    V  WNAM+++  +++    A+ LF E+   G
Sbjct: 50  TSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEG 109

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V  D TTL I++S+ + MG L  G+ +H  S KT    D+++ + LI +Y+KC     +E
Sbjct: 110 VGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSE 169

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            VF  +   DI+ WNSM+ G + N+   ++  +FK+M  +       S    +S+ A L 
Sbjct: 170 CVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLG 229

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGS---ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
               G+ +H    K GY  DI   S   +LI +Y +C DI  A   F  M  K+ V+WN 
Sbjct: 230 ELSFGQVIHGWGIKLGY-KDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNA 288

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASG-VKPDDITFVAILTACS-----HSGLVDVGVEIFN 630
           M+ G A N    EA  L  +M   G V+PD +T V I+  C+       G    G+ +  
Sbjct: 289 MLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRR 348

Query: 631 SMQLDHGV-EPILDHYTCMIDCLGRA---GHFHEAEMLIDEM 668
            M LD  V   ++D Y+   D + RA   GH  EA+ L  ++
Sbjct: 349 EMGLDFSVTNSLIDMYSKCKD-VKRAEHNGHSREAQHLFRQL 389



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 217/534 (40%), Gaps = 80/534 (14%)

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
           F +S      NV     HCL  K+G  A L  S SLL  Y++  D  S+  +F  +  R 
Sbjct: 19  FIKSFAARPTNVTASIAHCLAFKMGALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRD 78

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-- 360
           V+ WN MI    +      A+ L   +   G   D  T + ++ A    G++  GR +  
Sbjct: 79  VILWNAMITASVENQCFGVAVNLFVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHG 138

Query: 361 ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                            F  M    + SWN+M+   + +   K+
Sbjct: 139 ISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKK 198

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA----SHIDNYVAS 443
           ++  F++M +   + D  +L   +S+ A +G L  G+ +H   +K      SH  N   +
Sbjct: 199 SLWYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDISH--NSFEN 256

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR-QNEMY 502
            LI +YS+C+  + AE +F  +   DIV WN+M+ GL+LN    EAF    +M+    + 
Sbjct: 257 SLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQ 316

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +   ++  CA+L    +GR VH    +     D  V ++LI+MY KC D+  A   
Sbjct: 317 PDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAE-- 374

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
                                NG+  EA  L++ ++ S  +    T +AIL +C  S  +
Sbjct: 375 --------------------HNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFL 414

Query: 623 DVGVEIFNSMQLDHG-------VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
             G E  +  QL  G       V  ++  Y   I+C    G       L+  +    D V
Sbjct: 415 QFG-ESIHCWQLKLGFANNPLAVNSLMLMY---INC----GDLVACFSLLQTVSAAADIV 466

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRA 729
            W  +++ C  + +   A +A   L R DP        L N+ S+ G  + L A
Sbjct: 467 CWNTVMAGCTQNGHFWEALKAF-NLMRQDPDVCHDSVALFNVISACGNLELLFA 519



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 161/400 (40%), Gaps = 88/400 (22%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG  LH   L+  +  D  + N LI +Y +C    +A+ +F    ++++ SWN ++SA  
Sbjct: 519 AGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFS 578

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++ D   A +LF  +                                   F P  IT+  
Sbjct: 579 QNKDGRRALELFCHIE----------------------------------FEPNEITIVG 604

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A T L  + HG++ HG VI+  L  N +V+ AL  +Y+ CG    A  +F+   E +
Sbjct: 605 ILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERS 664

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
              + +M+S         +A+E+F  M          +  S+L  C+  G  V   ++  
Sbjct: 665 VAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGL-VNEGLWYY 723

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S+     NV              EAD      ++DM  + G +                 
Sbjct: 724 SNMLELFNV--------------EADTEHHVCMVDMLGRAGRL----------------- 752

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----MF 361
                   G+ Y      E +++M +   +P+      +L AC   GD+K GRE    +F
Sbjct: 753 --------GEAY------EFIRQMPT---QPEPGVWGALLSACSYHGDLKMGREVAELLF 795

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           +  P  +V  + ++ + Y  +   K+A++L R +Q +G+K
Sbjct: 796 ELEPE-NVGYYISLSNMYVAAGRWKDAVELRRIIQDKGLK 834


>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g25970
 gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 701

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 205/644 (31%), Positives = 334/644 (51%), Gaps = 56/644 (8%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H   IK G   +IYV+N +L  Y K G+  +A  +F+EM + + V++  M+SG     ++
Sbjct: 23  HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            +A  +F  M R    +D  S S +L        G+ S           R   G+QVH L
Sbjct: 83  EDAWCLFTCMKRSGSDVDGYSFSRLLK-------GIAS---------VKRFDLGEQVHGL 126

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            IK G+E ++++ +SL+DMYAK   ++ A   F  + E + VSWN +IAG+ Q      A
Sbjct: 127 VIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTA 186

Query: 323 IELLQRMK--------SCGFEP---------------------------DEVTSIN-MLV 346
             LL  M+        +  F P                            E+T  N M+ 
Sbjct: 187 FWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMIS 246

Query: 347 ACVRSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           +    G +   + +FD +  S  + SWN+M++ +S+ E  + A +LF +MQ   V+ D  
Sbjct: 247 SYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIY 306

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL--AERVFH 463
           T   +LS+C+       GK +H   +K          + LI +Y +     +  A  +F 
Sbjct: 307 TYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE 366

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            +   D++ WNS+I G +   L  +A  FF  +R +E+    ++F+ +L SC+ L++   
Sbjct: 367 SLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQL 426

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYA 582
           G+Q+HA   K G+V++ FV S+LI MY KCG I  AR+ F  +  K +TV WN MI GYA
Sbjct: 427 GQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYA 486

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           Q+G G  ++ L+  M    VK D +TF AILTACSH+GL+  G+E+ N M+  + ++P +
Sbjct: 487 QHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRM 546

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           +HY   +D LGRAG  ++A+ LI+ MP   DP++ +  L  CR    + +A + A  L  
Sbjct: 547 EHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLE 606

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++P++   Y  L+++YS L +W++  +V+++M E  + K P +S
Sbjct: 607 IEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWS 650



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 166/636 (26%), Positives = 291/636 (45%), Gaps = 97/636 (15%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           DIY  N IL +  K   L +A  LFDEMP+R+ VSWN +IS     G  E A  ++  M 
Sbjct: 34  DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             G      + + + K   ++   + G + HGLVIK G + N+YV ++L+ +YAKC   +
Sbjct: 94  RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVC 231
            A   F+E+SEPN V++ A+++G  +   +  A  +  LM ++ AV++D+ + + +L + 
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLL 213

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
                          D  F   +  +QVH   +KLG + ++ + N+++  YA  G +  A
Sbjct: 214 --------------DDPMFCNLL--KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDA 257

Query: 292 EVIFSNL-PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           + +F  L   + ++SWN MIAG+ +      A EL  +M+    E D  T   +L AC  
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC-- 315

Query: 351 SGD-------------IKTGRE--------------------------MFDSMPSPSVSS 371
           SG+             IK G E                          +F+S+ S  + S
Sbjct: 316 SGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLIS 375

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           WN++++ ++Q    ++A+K F  ++   +K D    + +L SC+ +  L+ G+Q+HA + 
Sbjct: 376 WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALAT 435

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRI-PELDIVCWNSMIAGLSLNSLDIEAF 490
           K+    + +V S LI +YSKC   E A + F +I  +   V WN+MI G + + L   + 
Sbjct: 436 KSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSL 495

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             F QM    +     +F  +L++C+      +G ++   +E       ++     +E Y
Sbjct: 496 DLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEP------VYKIQPRMEHY 549

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
               D+ G                        + G  ++A  L + M    + PD +   
Sbjct: 550 AAAVDLLG------------------------RAGLVNKAKELIESM---PLNPDPMVLK 582

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
             L  C   G +++  ++ N +     +EP  DH+T
Sbjct: 583 TFLGVCRACGEIEMATQVANHLL---EIEP-EDHFT 614



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/463 (23%), Positives = 201/463 (43%), Gaps = 93/463 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +++ G   + ++ + L+++Y+KC     A   F ++   +  SWNA+++   +
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D++ A+ L   M  +  V+ +                                  A  
Sbjct: 180 VRDIKTAFWLLGLMEMKAAVTMD----------------------------------AGT 205

Query: 127 FKASTALLD----VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           F     LLD        ++ H  V+K+GL   I + NA++S YA CG    A  VF+ + 
Sbjct: 206 FAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLG 265

Query: 183 EPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + +++ +M++G +K +    A E+F  M R  V  D  + + +L  C+    G E  
Sbjct: 266 GSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS----GEEHQ 321

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK--NGDMDSAEVIFSNLP 299
           +F            G+ +H + IK G E     +N+L+ MY +   G M+ A  +F +L 
Sbjct: 322 IF------------GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK 369

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS---------------------------- 331
            + ++SWN +I G+ QK  S  A++    ++S                            
Sbjct: 370 SKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ 429

Query: 332 -------CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSP-SVSSWNAMLSSYSQSE 383
                   GF  +E    +++V   + G I++ R+ F  + S  S  +WNAM+  Y+Q  
Sbjct: 430 IHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
             + ++ LF +M  + VK D  T   IL++C+  G+++ G ++
Sbjct: 490 LGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 6/277 (2%)

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
            H  ++K  S  D YV++ ++  Y K      A  +F  +P+ D V WN+MI+G +    
Sbjct: 22  THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             +A+  F  M+++      +SF+ +L   A +     G QVH  + K GY  +++VGS+
Sbjct: 82  LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKP 604
           L++MY KC  +  A + F  +   N+V+WN +I G+ Q      A  L   M + + V  
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201

Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEML 664
           D  TF  +LT        ++  ++ ++  L  G++  +     MI      G   +A+ +
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQV-HAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260

Query: 665 IDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
            D +    D + W  +++    H      K +A ELF
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHE----LKESAFELF 293


>gi|356509887|ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Glycine max]
          Length = 750

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 222/781 (28%), Positives = 365/781 (46%), Gaps = 100/781 (12%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
            HA  + +G   + F+ ++LI LY   NN  S+                      C +  
Sbjct: 26  FHALTVTSGHSTNLFMASKLISLYDSLNNDPSS----------------------CST-- 61

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                 LF  +P ++   +N+ + +L    L  + LS+++ M      P H TL  V  A
Sbjct: 62  ------LFHSLPSKDTFLYNSFLKSLFSRSLFPRVLSLFSHMRASNLSPNHFTLPIVVSA 115

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
           +  L  + HG   H L  K GL    + + + +SLY++CG  + A  VF+E+ + + V +
Sbjct: 116 AAHLTLLPHGASLHALASKTGL---FHSSASFVSLYSRCGRMELARKVFDEIPKRDVVAW 172

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL--GVCAREGCGVESDVFAQSD 247
           TA++ G        + L   R  +   V  D    +     G  A    G  S+      
Sbjct: 173 TALIIGHVHNGEPEKGLRCLR-HVHGVVEDDEKPNAKTWEGGFLACGNLGAVSE------ 225

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G  +H + +K G  +   + +S+LDMY+K G    A   F  +  + ++ W 
Sbjct: 226 --------GSCLHGVVVKNGVAS--FIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWT 275

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG-----DIKTGR---- 358
            +I  Y +     + + L + M+     PD V     +V CV SG     D+  G+    
Sbjct: 276 SVIGVYARIGMMGECLRLFREMQENEIRPDGV-----VVGCVLSGFGNSMDVFQGKAFHG 330

Query: 359 ------------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                         E    +   S   WN M+  Y +   + + 
Sbjct: 331 VIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIFPLCQGSGDGWNFMVFGYGKVGENVKC 390

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY-VASGLIG 447
           ++LFREMQ+ G+  +   +A  ++SCA +G +  G+ +H   +K      N  V + L+ 
Sbjct: 391 VELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNISVTNSLVE 450

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y KC +   A R+F+   E D+V WN++I+         EA   F +M + +  P   +
Sbjct: 451 MYGKCGKMTFAWRIFN-TSETDVVSWNTLISSHVHIKQHEEAVNLFSKMVREDQKPNTAT 509

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
              VLS+C+ L+S  +G +VH  I + G+  ++ +G+ALI+MY KCG +  +R  FD M 
Sbjct: 510 LVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMM 569

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            K+ + WN MI GY  NGY + A+ +++ M  S V P+ ITF+++L+AC+H+GLV+ G  
Sbjct: 570 EKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHAGLVEEGKY 629

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           +F  M+  + V P L HYTCM+D LGR G+  EAE ++  MP   D  +W  LL  C+ H
Sbjct: 630 MFARMK-SYSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLSMPISPDGGVWGALLGHCKTH 688

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC-IVKDPAYS 746
             + +  R A+    L+P+N   Y ++AN+YS +GRW++   VR  M E C + K   +S
Sbjct: 689 NQIEMGIRIAKYAIDLEPENDGYYIIMANMYSFIGRWEEAENVRRTMKERCSMGKKAGWS 748

Query: 747 L 747
           L
Sbjct: 749 L 749



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 145/639 (22%), Positives = 266/639 (41%), Gaps = 84/639 (13%)

Query: 123 LASVFKASTALLDVEHGR------RCHGLVIKIGLDKNIYVANALLSLY-------AKCG 169
           ++  + A   +L  +H R      R H L +  G   N+++A+ L+SLY       + C 
Sbjct: 1   MSKAYDAGELILVSKHIRTLDSLLRFHALTVTSGHSTNLFMASKLISLYDSLNNDPSSCS 60

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
              H++P        +   + + +  L         L +F  M    +S +  +L  V+ 
Sbjct: 61  TLFHSLP------SKDTFLYNSFLKSLFSRSLFPRVLSLFSHMRASNLSPNHFTLPIVVS 114

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
             A                  +   HG  +H L  K G     H S S + +Y++ G M+
Sbjct: 115 AAAH----------------LTLLPHGASLHALASKTGL---FHSSASFVSLYSRCGRME 155

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC---GFEPDEVTSINMLV 346
            A  +F  +P+R VV+W  +I G+    +  K +  L+ +        +P+  T     +
Sbjct: 156 LARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLRCLRHVHGVVEDDEKPNAKTWEGGFL 215

Query: 347 ACVRSGDIKTGREMFDSMPSPSVSS---------------------------------WN 373
           AC   G +  G  +   +    V+S                                 W 
Sbjct: 216 ACGNLGAVSEGSCLHGVVVKNGVASFIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWT 275

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           +++  Y++     E ++LFREMQ   ++PD   +  +LS       +  GK  H   ++ 
Sbjct: 276 SVIGVYARIGMMGECLRLFREMQENEIRPDGVVVGCVLSGFGNSMDVFQGKAFHGVIIRR 335

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               D  V   L+ +Y K     LAER+F  + +     WN M+ G      +++    F
Sbjct: 336 YYVDDEKVNDSLLFMYCKFGMLSLAERIF-PLCQGSGDGWNFMVFGYGKVGENVKCVELF 394

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN--DIFVGSALIEMYC 551
           ++M+   ++      A+ ++SCA+L +   GR +H  + K G+++  +I V ++L+EMY 
Sbjct: 395 REMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIK-GFLDGKNISVTNSLVEMYG 453

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCG +  A + F+     + V+WN +I  +      +EAV L+  M+    KP+  T V 
Sbjct: 454 KCGKMTFAWRIFNTSE-TDVVSWNTLISSHVHIKQHEEAVNLFSKMVREDQKPNTATLVV 512

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +L+ACSH   ++ G  +   +  + G    L   T +ID   + G   ++ M+ D M  +
Sbjct: 513 VLSACSHLASLEKGERVHCYIN-ESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSM-ME 570

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            D + W  ++S   ++     A+ A E    ++  N  P
Sbjct: 571 KDVICWNAMISGYGMNG---YAESALEIFQHMEESNVMP 606



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 4/116 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H +I  +G   +  L   LI++Y+KC     ++ +FD M  KD+  WNA++S    
Sbjct: 526 GERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMMEKDVICWNAMISGYGM 585

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
           +   E A ++F  M E NV    +++ +L+SA    GL E+   ++ +M +    P
Sbjct: 586 NGYAESALEIFQHMEESNVMPNGITFLSLLSACAHAGLVEEGKYMFARMKSYSVNP 641


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 178/529 (33%), Positives = 293/529 (55%), Gaps = 37/529 (6%)

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G QVH   + +GF  DL ++N L+DMY K   +D A  +F  + ER+VVSW  ++ GY 
Sbjct: 22  QGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYL 81

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VRSG------ 352
           Q+  +  ++ LL  M   G +P+E T    L AC                V+SG      
Sbjct: 82  QEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSV 141

Query: 353 ------DI--KTGR-----EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                 D+  K GR     ++F+ MP  ++ SWNAM++ ++   N ++++ LF+ MQ +G
Sbjct: 142 VGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQG 201

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID--NYVASGLIGIYSKCQRNEL 457
             PD  T    L +C A+G +  G Q+HA+ +     I   N +AS ++ +Y+KC     
Sbjct: 202 EVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFE 261

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A++VF RI + +++ W+++I G +     +EA   F+Q+R++      F  + ++   A 
Sbjct: 262 AQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFAD 321

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           L+   QG+Q+H  I K     DI V +++I+MY KCG    A + F  M  +N V+W  M
Sbjct: 322 LALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVM 381

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I GY ++G G++A+ L+  M   G++ D++ ++A+L+ACSHSGL+    E F+ +  +H 
Sbjct: 382 ITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQ 441

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           ++P ++HY CM+D LGRAG   EA+ LI+ M  K +  IW+ LLS+CR+H N+ + +   
Sbjct: 442 MKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVG 501

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           E LFR+D  N   Y +++NIY+  G W +   VR+L+    + K+   S
Sbjct: 502 EILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQS 550



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 223/460 (48%), Gaps = 62/460 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H   +++G    + + N  I++YSKC     A+ +F+KMP +++ SWNA       
Sbjct: 124 GMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNA------- 176

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I+     G   K+L ++ +M  +G VP   T  S 
Sbjct: 177 ------------------------MIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTST 212

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNI--YVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            KA  AL  +  G + H  +I  G   +I   +A+A++ LYAKCG+   A  VF+ + + 
Sbjct: 213 LKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQK 272

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N ++++A++ G A+   ++EA+++FR +     ++D   LS ++GV A            
Sbjct: 273 NLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFA------------ 320

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 +    G+Q+HC  +K+    D+ ++NS++DMY K G  + AE +FS +  R+VV
Sbjct: 321 ----DLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVV 376

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SW VMI GYG+     KAI L  RM+  G E DEV  + +L AC  SG I+  +E F  +
Sbjct: 377 SWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRL 436

Query: 365 PS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
            +     P++  +  M+    ++   KEA  L   M+   +KP+      +LS+C   G 
Sbjct: 437 CNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMK---LKPNEGIWQTLLSACRVHGN 493

Query: 420 LESGKQVHAASLKT-ASHIDNYVASGLI----GIYSKCQR 454
           LE G++V     +    +  NYV    I    G + +C+R
Sbjct: 494 LEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECER 533



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 254/566 (44%), Gaps = 94/566 (16%)

Query: 137 EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
           + G + H   + +G   ++ + N L+ +Y KC     A  VF+ M E N V++TA+M G 
Sbjct: 21  DQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGY 80

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
            +      +L +   M    V  +  + S+ L  C   G  VE+               G
Sbjct: 81  LQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGV-VEN---------------G 124

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
            Q+H + +K GFE    + N+ +DMY+K G +  AE +F+ +P R++VSWN MIAG+  +
Sbjct: 125 MQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHE 184

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------------- 357
               K++ L QRM+  G  PDE T  + L AC   G I+ G                   
Sbjct: 185 GNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI 244

Query: 358 ------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                             +++FD +   ++ SW+A++  ++Q  N  EA+ LFR+++   
Sbjct: 245 IASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESV 304

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
              D   L+I++   A + ++E GKQ+H   LK  S +D  VA+ +I +Y KC   E AE
Sbjct: 305 SNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAE 364

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           R+F  +   ++V W  MI G   + L  +A   F +M+ + +   + ++  +LS+C+   
Sbjct: 365 RLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSG 424

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
              + ++  +++  +  +         IE Y    DI G                     
Sbjct: 425 LIRESQEYFSRLCNNHQM------KPNIEHYACMVDILG--------------------- 457

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV---EIFNSMQLDH 636
              + G   EA  L ++M    +KP++  +  +L+AC   G +++G    EI   M  D+
Sbjct: 458 ---RAGQLKEAKNLIENM---KLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDN 511

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAE 662
            V     +Y  M +    AG++ E E
Sbjct: 512 PV-----NYVMMSNIYAEAGYWKECE 532



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 152/302 (50%), Gaps = 8/302 (2%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           +R  LA +L +C+  G+ + G QVHAA++      D  + + LI +Y KC R +LA  VF
Sbjct: 3   ERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVF 62

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
            R+ E ++V W +++ G         +     +M  + + P +F+F+T L +C  L    
Sbjct: 63  DRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVE 122

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G Q+H    K G+     VG+A I+MY KCG I  A Q F+ M  +N V+WN MI G+ 
Sbjct: 123 NGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHT 182

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
             G G +++ L++ M   G  PD+ TF + L AC   G +  G +I  S+ +  G    +
Sbjct: 183 HEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASL-ITRGFPISI 241

Query: 643 DHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
            +   + ++D   + G+  EA+ + D +  K + + W  L+       N+      A +L
Sbjct: 242 RNIIASAIVDLYAKCGYLFEAQKVFDRIEQK-NLISWSALIQGFAQEGNL----LEAMDL 296

Query: 701 FR 702
           FR
Sbjct: 297 FR 298



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 147/637 (23%), Positives = 258/637 (40%), Gaps = 151/637 (23%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA  +  G   D  + N LI++Y KC+                             
Sbjct: 23  GLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSR---------------------------- 54

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              ++ A  +FD M ERNVVSW  L+   ++ G  + +L++  +M   G  P   T ++ 
Sbjct: 55  ---VDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTS 111

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA  AL  VE+G + HG+ +K G +    V NA + +Y+KCG    A  VF +M   N 
Sbjct: 112 LKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNL 171

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ AM++G        ++L +F+ M  +    D  + +S L  C   G           
Sbjct: 172 VSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGA---------- 221

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLH--LSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                R   G Q+H   I  GF   +   ++++++D+YAK G +  A+ +F  + +++++
Sbjct: 222 ----IRG--GTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLI 275

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE-VTSINMLV----ACVRSGD------ 353
           SW+ +I G+ Q+    +A++L ++++      D  V SI M V    A V  G       
Sbjct: 276 SWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYI 335

Query: 354 -------------------IKTG-----REMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                              +K G       +F  M   +V SW  M++ Y +    ++AI
Sbjct: 336 LKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAI 395

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF  MQ  G++ D      +LS+C+  G++   ++                       +
Sbjct: 396 HLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEY----------------------F 433

Query: 450 SK-CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           S+ C  +++   + H    +DI+     +          EA    + M+   + P +  +
Sbjct: 434 SRLCNNHQMKPNIEHYACMVDILGRAGQLK---------EAKNLIENMK---LKPNEGIW 481

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
            T+LS+C          +VH  +E    V +I                         M  
Sbjct: 482 QTLLSAC----------RVHGNLEIGREVGEILF----------------------RMDT 509

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
            N V +  M + YA+ GY  E  R+ K + A G+K +
Sbjct: 510 DNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKE 546


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 179/538 (33%), Positives = 292/538 (54%), Gaps = 36/538 (6%)

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           Q+  K  R   G+Q+H L I  G+     L+N L++MY+K G++D A  +F  +P+R++V
Sbjct: 13  QTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLV 72

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           SW  MI+G  Q  + ++AI     M+ CG  P +    + + AC   G I+ G++M    
Sbjct: 73  SWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLA 132

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          F+ MP     SW AM+  YS+    +EA+
Sbjct: 133 LKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEAL 192

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
             F++M    V  D+  L   L +C A+   + G+ VH++ +K     D +V + L  +Y
Sbjct: 193 LAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMY 252

Query: 450 SKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           SK    E A  VF    E  ++V +  +I G        +    F ++R+  + P +F+F
Sbjct: 253 SKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF 312

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           ++++ +CA  ++  QG Q+HAQ+ K  +  D FV S L++MY KCG +  A Q FD +  
Sbjct: 313 SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGD 372

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
              + WN ++  + Q+G G +A+++++ M+  GVKP+ ITF+++LT CSH+GLV+ G++ 
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 432

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F SM   +GV P  +HY+C+ID LGRAG   EA+  I+ MP + +   W   L +CR+H 
Sbjct: 433 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +  + K AAE+L +L+PKNS    LL+NIY++  +W+D+R+VR  M +  + K P YS
Sbjct: 493 DKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYS 550



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 159/518 (30%), Positives = 249/518 (48%), Gaps = 91/518 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA ++  G    TFL N L+ +YSKC                              
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCG----------------------------- 54

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             +L+ A KLFD MP+RN+VSW  +IS L +N    +A+  +  M   G VPT    +S 
Sbjct: 55  --ELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSA 112

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A  +L  +E G++ H L +K G+   ++V + L  +Y+KCG    A  VFEEM   +E
Sbjct: 113 IRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDE 172

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC-AREGCGVESDVFAQ 245
           V++TAM+ G +K     EAL  F+ MI + V+ID   L S LG C A + C         
Sbjct: 173 VSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKAC--------- 223

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE-RSVV 304
              KF R+VH        +KLGFE+D+ + N+L DMY+K GDM+SA  +F    E R+VV
Sbjct: 224 ---KFGRSVHSS-----VVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVV 275

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           S+  +I GY +  Q  K + +   ++  G EP+E T  +++ AC     ++ G ++    
Sbjct: 276 SYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQV 335

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          FD +  P+  +WN+++S + Q    K+AI
Sbjct: 336 MKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAI 395

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI---DNYVASGLI 446
           K+F  M  RGVKP+  T   +L+ C+  G++E G     +  KT   +   ++Y  S +I
Sbjct: 396 KIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHY--SCVI 453

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
            +  +  R + A+   +R+P E +   W S +    ++
Sbjct: 454 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIH 491



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 235/507 (46%), Gaps = 61/507 (12%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           LA V +       +  G++ H L+I  G     ++ N L+++Y+KCG   HA+ +F+ M 
Sbjct: 8   LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           + N V++TAM+SGL++  +  EA+  F  M          + SS +  CA  G  +E   
Sbjct: 68  QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG-SIE--- 123

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+Q+HCL +K G  ++L + ++L DMY+K G M  A  +F  +P + 
Sbjct: 124 ------------MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKD 171

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRM----------------------KSC-------- 332
            VSW  MI GY +  +  +A+   ++M                      K+C        
Sbjct: 172 EVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHS 231

Query: 333 -----GFEPDEVTSINMLVACVRSGDIKTGREMF--DSMPSPSVSSWNAMLSSYSQSENH 385
                GFE D      +     ++GD+++   +F  DS    +V S+  ++  Y ++E  
Sbjct: 232 SVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDS-ECRNVVSYTCLIDGYVETEQI 290

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++ + +F E++ +G++P+  T + ++ +CA    LE G Q+HA  +K     D +V+S L
Sbjct: 291 EKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSIL 350

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y KC   E A + F  I +   + WNS+++    + L  +A   F++M    + P  
Sbjct: 351 VDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNA 410

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            +F ++L+ C+      +G      ++K  G V      S +I++  + G +  A++F +
Sbjct: 411 ITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFIN 470

Query: 565 MM-HGKNTVTWNEM-----IHGYAQNG 585
            M    N   W        IHG  + G
Sbjct: 471 RMPFEPNAFGWCSFLGACRIHGDKEMG 497



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 200/424 (47%), Gaps = 56/424 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   L+ G+  + F+ + L ++YSKC        +FD                   
Sbjct: 125 GKQMHCLALKFGIGSELFVGSNLEDMYSKCGA------MFD------------------- 159

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A K+F+EMP ++ VSW  +I    + G  E+AL  + KM +E        L S 
Sbjct: 160 ------ACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCST 213

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
             A  AL   + GR  H  V+K+G + +I+V NAL  +Y+K G  + A  VF   SE  N
Sbjct: 214 LGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRN 273

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T ++ G  +T+++ + L +F  + R+ +  +  + SS++  CA +   +E      
Sbjct: 274 VVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQA-ALE------ 326

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G Q+H   +K+ F+ D  +S+ L+DMY K G ++ A   F  + + + ++
Sbjct: 327 ---------QGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIA 377

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN +++ +GQ      AI++ +RM   G +P+ +T I++L  C  +G ++ G + F SM 
Sbjct: 378 WNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMD 437

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P    ++ ++    ++   KEA +    M F   +P+       L +C   G  
Sbjct: 438 KTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF---EPNAFGWCSFLGACRIHGDK 494

Query: 421 ESGK 424
           E GK
Sbjct: 495 EMGK 498



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 126/236 (53%), Gaps = 11/236 (4%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D   LA ++ + A    L  GKQ+HA  +        ++ + L+ +YSKC   + A ++F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             +P+ ++V W +MI+GLS NS   EA   F  MR     PTQF+F++ + +CA L S  
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G+Q+H    K G  +++FVGS L +MY KCG ++ A + F+ M  K+ V+W  MI GY+
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS-----------HSGLVDVGVE 627
           + G  +EA+  +K MI   V  D     + L AC            HS +V +G E
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFE 239



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 153/333 (45%), Gaps = 49/333 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H+ +++ G   D F+ N L ++YSK  +  SA ++F              +
Sbjct: 221 KACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFG-------------I 267

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
            ++C                 RNVVS+  LI   V     EK LSV+ ++  +G  P   
Sbjct: 268 DSEC-----------------RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T +S+ KA      +E G + H  V+KI  D++ +V++ L+ +Y KCG  + A+  F+E+
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEI 370

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            +P E+ + +++S   +     +A+++F  M+ + V  ++++  S+L  C+  G   E  
Sbjct: 371 GDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL 430

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-E 300
            +  S +K    V G++              H S  ++D+  + G +  A+   + +P E
Sbjct: 431 DYFYSMDKTYGVVPGEE--------------HYS-CVIDLLGRAGRLKEAKEFINRMPFE 475

Query: 301 RSVVSWNVMIAG---YGQKYQSTKAIELLQRMK 330
            +   W   +     +G K     A E L +++
Sbjct: 476 PNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLE 508



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 2/175 (1%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           + A V+ + AK     +G+Q+HA +   GY    F+ + L+ MY KCG++  A + FD M
Sbjct: 7   ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             +N V+W  MI G +QN    EA+R +  M   G  P    F + + AC+  G +++G 
Sbjct: 67  PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           ++ + + L  G+   L   + + D   + G   +A  + +EMPCKD+ V W  ++
Sbjct: 127 QM-HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDE-VSWTAMI 179


>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 580

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 184/528 (34%), Positives = 282/528 (53%), Gaps = 72/528 (13%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ +H   IK        L+N L+D Y+K   + SA  +F  LP ++  SWN++I+ Y  
Sbjct: 33  GKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYS- 91

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                             RSG       + D MP P++ S+N++
Sbjct: 92  ----------------------------------RSGLFNEAHNLLDQMPKPNLVSYNSL 117

Query: 376 LSSYSQSENHKEAIKLFREM--QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           +S        KE++ +F+ M  Q   V  D  TL  ++ SCA++G  E  +QVH A++  
Sbjct: 118 ISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIII 177

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM----------------- 476
             + +  + + LI  Y KC   +++  +F R+PE D+V W SM                 
Sbjct: 178 GLNSNIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLF 237

Query: 477 --------------IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
                         IAG + N    EA   F+QMR+  + P+ F+FA+VLS+CA L+   
Sbjct: 238 SQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIA 297

Query: 523 QGRQVHAQIEKDG---YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +G+++H  I +     Y  +IF+ +ALI+MYCKCG +  A   F  MH K+ V+WN +I 
Sbjct: 298 RGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLIT 357

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G+AQNG+G+E++ +++ MI + ++P+ +TF+ +L+AC H+GLV  G+ I +SM+ D+GV 
Sbjct: 358 GFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVC 417

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV-IWEVLLSSCRLHANVRLAKRAAE 698
           P  DHY  MID LGR     EA  LI   P   D V +W  LL +CR+H N+ LA+RAAE
Sbjct: 418 PRSDHYAIMIDLLGRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAE 477

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LF+L+P N+A Y ++ NIY++  RWD+ R VR LM E  + K+ A S
Sbjct: 478 VLFQLEPGNAARYVMVYNIYAAASRWDEARQVRRLMMERGLRKEAACS 525



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 216/426 (50%), Gaps = 51/426 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKLLH+H ++  L   TFL NRLI+ YSKC++  SA  +F  +P K+ +SWN I+SA  +
Sbjct: 33  GKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYSR 92

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE--GFVPTHITLA 124
           S     A+ L D+MP+ N+VS+N+LIS L  +G  +++L+V+  M  +    +    TL 
Sbjct: 93  SGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLV 152

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG--------------- 169
           S+  +  +L   E  R+ HG  I IGL+ NI + NAL+  Y KCG               
Sbjct: 153 SLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFSRMPER 212

Query: 170 ----WT------------KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
               WT            + A  +F +M E N V++TA+++G A+  R  EAL +F  M 
Sbjct: 213 DVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMR 272

Query: 214 RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
            + +   + + +SVL  CA      +  + A+      + +HG  +    I   +  ++ 
Sbjct: 273 EEGIPPSAFTFASVLSACA------DLALIAR-----GKEIHGHIIRSTCID--YFCNIF 319

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           + N+L+DMY K G M SA  +F  + E+ +VSWN +I G+ Q     +++ + +RM    
Sbjct: 320 ILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEAD 379

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEA 388
             P+ VT + +L AC  +G +  G  + DSM       P    +  M+    ++   +EA
Sbjct: 380 IRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEA 439

Query: 389 IKLFRE 394
           + L + 
Sbjct: 440 MGLIKR 445



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 188/388 (48%), Gaps = 58/388 (14%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           KN +  N ++S Y++ G    A  + ++M +PN V++ +++SGL       E+L +F+ M
Sbjct: 78  KNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTM 137

Query: 213 IRKA--VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
           +++   V  D  +L S++G CA  G             +  R VHG       I +G  +
Sbjct: 138 LKQCSNVLFDEFTLVSLVGSCASLGA-----------PELLRQVHGA-----AIIIGLNS 181

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           ++ + N+L+D Y K G+ D +  IFS +PER VVSW  M+A Y Q               
Sbjct: 182 NIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQ--------------- 226

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                               +  ++    +F  M   +  SW A+++ ++Q+    EA+ 
Sbjct: 227 --------------------ASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALH 266

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN----YVASGLI 446
           LF +M+  G+ P   T A +LS+CA + ++  GK++H   +++   ID     ++ + LI
Sbjct: 267 LFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTC-IDYFCNIFILNALI 325

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y KC +   A  +F  + E DIV WNS+I G + N    E+   F++M + ++ P   
Sbjct: 326 DMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHV 385

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           +F  +LS+C       +G ++   +EKD
Sbjct: 386 TFLGLLSACCHTGLVSEGLRILDSMEKD 413



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 6/162 (3%)

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P    +++++S C        G+ +H+   K   +   F+ + LI+ Y KC  I  A + 
Sbjct: 12  PAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKV 71

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F ++  KNT +WN +I  Y+++G  +EA  L   M     KP+ +++ ++++   H G  
Sbjct: 72  FHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQM----PKPNLVSYNSLISGLGHHGFR 127

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEML 664
              + +F +M L      + D +T ++  +G        E+L
Sbjct: 128 KESLNVFKTM-LKQCSNVLFDEFT-LVSLVGSCASLGAPELL 167


>gi|15225505|ref|NP_181492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099847|sp|O80647.1|PP195_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g39620
 gi|3355489|gb|AAC27851.1| hypothetical protein [Arabidopsis thaliana]
 gi|330254604|gb|AEC09698.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 218/697 (31%), Positives = 356/697 (51%), Gaps = 56/697 (8%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y   A++   CK+ DL  A ++FD+M  ++VV+WN ++S L +NG    AL +++ M 
Sbjct: 134 DVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMR 193

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYV-ANALLSLYAKCGWT 171
           +      H++L ++  A + L   +  R  HGLVIK G    I+  ++ L+ +Y  C   
Sbjct: 194 SCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADL 250

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A  VFEE+   +E ++  MM+  A      E LE+F LM    V ++ V+ +S L   
Sbjct: 251 YAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAA 310

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A  G     D+           V G  +H   ++ G   D+ ++ SL+ MY+K G+++ A
Sbjct: 311 AYVG-----DL-----------VKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIA 354

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-- 349
           E +F N+ +R VVSW+ MIA Y Q  Q  +AI L + M     +P+ VT  ++L  C   
Sbjct: 355 EQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGV 414

Query: 350 ---RSG----------DI---------------KTGR-----EMFDSMPSPSVSSWNAML 376
              R G          DI               K GR     + F+ +P     ++NA+ 
Sbjct: 415 AASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALA 474

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
             Y+Q  +  +A  +++ M+  GV PD  T+  +L +CA       G  V+   +K    
Sbjct: 475 QGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFD 534

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
            + +VA  LI +++KC     A  +F +   E   V WN M+ G  L+    EA   F+Q
Sbjct: 535 SECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQ 594

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M+  +  P   +F  ++ + A+LS+   G  VH+ + + G+ +   VG++L++MY KCG 
Sbjct: 595 MKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGM 654

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           I  + + F  +  K  V+WN M+  YA +G    AV L+  M  + +KPD ++F+++L+A
Sbjct: 655 IESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSA 714

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           C H+GLV+ G  IF  M   H +E  ++HY CM+D LG+AG F EA  ++  M  K    
Sbjct: 715 CRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVG 774

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYS 712
           +W  LL+S R+H N+ L+  A  +L +L+P N + YS
Sbjct: 775 VWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYS 811



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 187/697 (26%), Positives = 319/697 (45%), Gaps = 57/697 (8%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSW 88
           L+ +  +C N      +   +    +   N +++A       + +  +FD + +  VV W
Sbjct: 8   LLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLW 67

Query: 89  NNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           N++I    R GL  +AL  +  MS E G  P   +     KA    +D + G R H L+ 
Sbjct: 68  NSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIA 127

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
           ++GL+ ++Y+  AL+ +Y K      A  VF++M   + VT+  M+SGLA+      AL 
Sbjct: 128 EMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALL 187

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +F  M    V ID VSL +++   ++           +SD    R +HG     L IK G
Sbjct: 188 LFHDMRSCCVDIDHVSLYNLIPAVSK---------LEKSD--VCRCLHG-----LVIKKG 231

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F      S+ L+DMY    D+ +AE +F  +  +   SW  M+A Y       + +EL  
Sbjct: 232 F--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289

Query: 328 RMKSC-----------------------------------GFEPDEVTSINMLVACVRSG 352
            M++                                    G   D   + +++    + G
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCG 349

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           +++   ++F ++    V SW+AM++SY Q+  H EAI LFR+M    +KP+  TL  +L 
Sbjct: 350 ELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQ 409

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
            CA +     GK +H  ++K     +   A+ +I +Y+KC R   A + F R+P  D V 
Sbjct: 410 GCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVA 469

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           +N++  G +      +AF  +K M+ + + P   +   +L +CA  S   +G  V+ QI 
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII 529

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAV 591
           K G+ ++  V  ALI M+ KC  +  A   FD     K+TV+WN M++GY  +G  +EAV
Sbjct: 530 KHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAV 589

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
             ++ M     +P+ +TFV I+ A +    + VG+ + +S+ +  G          ++D 
Sbjct: 590 ATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSL-IQCGFCSQTPVGNSLVDM 648

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
             + G    +E    E+  K   V W  +LS+   H 
Sbjct: 649 YAKCGMIESSEKCFIEISNK-YIVSWNTMLSAYAAHG 684



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 152/585 (25%), Positives = 268/585 (45%), Gaps = 55/585 (9%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           HG +I  GL  +  + NA  SL+ +   ++    +F+ + +P  V + +M+ G  +    
Sbjct: 25  HGSLIVSGLKPHNQLINAY-SLFQRQDLSR---VIFDSVRDPGVVLWNSMIRGYTRAGLH 80

Query: 203 VEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
            EAL  F  M   K +  D  S +  L  CA              D K      G ++H 
Sbjct: 81  REALGFFGYMSEEKGIDPDKYSFTFALKACA-----------GSMDFK-----KGLRIHD 124

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
           L  ++G E+D+++  +L++MY K  D+ SA  +F  +  + VV+WN M++G  Q   S+ 
Sbjct: 125 LIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA 184

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVA-----------CVRSGDIKTG------------- 357
           A+ L   M+SC  + D V+  N++ A           C+    IK G             
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMY 244

Query: 358 ---------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
                      +F+ +     SSW  M+++Y+ +   +E ++LF  M+   V+ ++   A
Sbjct: 245 CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAA 304

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
             L + A +G L  G  +H  +++     D  VA+ L+ +YSKC   E+AE++F  I + 
Sbjct: 305 SALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDR 364

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           D+V W++MIA         EA   F+ M +  + P   +  +VL  CA +++S  G+ +H
Sbjct: 365 DVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIH 424

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
               K    +++   +A+I MY KCG    A + F+ +  K+ V +N +  GY Q G  +
Sbjct: 425 CYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDAN 484

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
           +A  +YK+M   GV PD  T V +L  C+       G  ++  + + HG +        +
Sbjct: 485 KAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQI-IKHGFDSECHVAHAL 543

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
           I+   +      A +L D+   +   V W ++++   LH     A
Sbjct: 544 INMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEA 588



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 206/458 (44%), Gaps = 83/458 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G  +H + ++ GL  D  +   L+ +YSKC     A+ LF  +  +D+ SW+A     
Sbjct: 317 VKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSA----- 371

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +I++  + G  ++A+S++  M      P  +TL 
Sbjct: 372 --------------------------MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLT 405

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV +    +     G+  H   IK  ++  +  A A++S+YAKCG    A+  FE +   
Sbjct: 406 SVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V F A+  G  +     +A ++++ M    V  DS ++  +L  CA          F 
Sbjct: 466 DAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA----------FC 515

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSV 303
            SD      V+GQ      IK GF+++ H++++L++M+ K   + +A V+F     E+S 
Sbjct: 516 -SDYARGSCVYGQ-----IIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKST 569

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM------------------- 344
           VSWN+M+ GY    Q+ +A+   ++MK   F+P+ VT +N+                   
Sbjct: 570 VSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSS 629

Query: 345 LVAC----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
           L+ C                 + G I++  + F  + +  + SWN MLS+Y+       A
Sbjct: 630 LIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCA 689

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           + LF  MQ   +KPD  +   +LS+C   G++E GK++
Sbjct: 690 VSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 140/280 (50%), Gaps = 12/280 (4%)

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
           T L ++L  C     L    QVH + + +     N     LI  YS  QR +L+  +F  
Sbjct: 6   TNLLLMLRECKNFRCL---LQVHGSLIVSGLKPHNQ----LINAYSLFQRQDLSRVIFDS 58

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLSSSFQ 523
           + +  +V WNSMI G +   L  EA  FF  M + + + P ++SF   L +CA      +
Sbjct: 59  VRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKK 118

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           G ++H  I + G  +D+++G+AL+EMYCK  D+  ARQ FD MH K+ VTWN M+ G AQ
Sbjct: 119 GLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQ 178

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
           NG    A+ L+ DM +  V  D ++   ++ A S     DV     + + +  G   I  
Sbjct: 179 NGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDV-CRCLHGLVIKKGF--IFA 235

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             + +ID        + AE + +E+  KD+   W  ++++
Sbjct: 236 FSSGLIDMYCNCADLYAAESVFEEVWRKDESS-WGTMMAA 274


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 192/578 (33%), Positives = 298/578 (51%), Gaps = 54/578 (9%)

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
            LE++  M+R  V  D  +   VL  CA        D F            G++VH   +
Sbjct: 25  GLEVYNQMVRIGVRPDDHTFPFVLKACA--------DAFEVRK--------GREVHGSVV 68

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG-QKYQSTKAI 323
           KLGFE+D+ + N+LL  Y   G +  A  +F  +PE+ +VSWN MI  +    +    A+
Sbjct: 69  KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----------------------- 360
           ++ + M   G +P+ +T  + L   V     K GRE+                       
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMY 188

Query: 361 ------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
                       F  + + +V SWNAM+++++Q+     A+ L R+MQ  G  P+  T  
Sbjct: 189 AKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFT 248

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
            +L +CA MG++  GK++HA S+      D +V++ L  +Y+K    +LA  VF      
Sbjct: 249 NVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLR- 307

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           D V +N +I G S  S   E+   F +M+   +     SF   LS+CA L++  QG+++H
Sbjct: 308 DEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIH 367

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
             + +  +   +FV ++L++ Y KCG I  AR  FD M  K+  +WN MI GY   G  D
Sbjct: 368 GFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELD 427

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
            A+ L+++M    V+ D ++F+A+L+ACSH GL++ G + F+ ++   G+EP   HY CM
Sbjct: 428 TAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKA-RGIEPTQMHYACM 486

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           +D LGRAG   EA  LI  +P   D  IW  LL +CR++ N+ LA  AAE LF L P++S
Sbjct: 487 VDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHS 546

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             Y+LL+N+Y+  GRWD+   +RELM    + K P  S
Sbjct: 547 GYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCS 584



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 249/484 (51%), Gaps = 54/484 (11%)

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           WN LI      G+    L VYN+M   G  P   T   V KA     +V  GR  HG V+
Sbjct: 10  WNTLIRGYSIAGVG-GGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD-RVVEAL 206
           K+G + +++V N LLS Y  CG  + A  VF+EM E + V++  M+   +       +AL
Sbjct: 69  KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
           +MFRLMI + +  +S+++SS L V       VE + F            G++VH  +I++
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVL------VELEFFKA----------GREVHGSSIRM 172

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           G E+D+ ++NSL+DMYAK+G    A  +F  L  ++VVSWN MIA + Q      A+ L+
Sbjct: 173 GLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLV 232

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----------FDSMPSPSVS------ 370
           ++M+  G  P+ VT  N+L AC R G ++ G+E+          FD   S +++      
Sbjct: 233 RQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKS 292

Query: 371 ------------------SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                             S+N ++  +SQ+ +  E++ LF EMQ  G+K D  +    LS
Sbjct: 293 GHLKLARNVFDTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALS 352

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +CA +  ++ GK++H   L+   HI  +VA+ L+  Y+KC R  LA  +F R+   D+  
Sbjct: 353 ACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVAS 412

Query: 473 WNSMIAGLS-LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
           WN+MI G   L  LD  A   F+ MR++++     SF  VLS+C+      +GR+   ++
Sbjct: 413 WNTMILGYGMLGELDT-AIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDEL 471

Query: 532 EKDG 535
           +  G
Sbjct: 472 KARG 475



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 205/455 (45%), Gaps = 84/455 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +++ G   D F+ N L+  Y  C     A  +FD+MP KD+            
Sbjct: 60  GREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDL------------ 107

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK-ALSVYNKMSNEGFVPTHITLAS 125
                              VSWN +I     NG   + AL ++  M +EG  P  IT++S
Sbjct: 108 -------------------VSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISS 148

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                  L   + GR  HG  I++GL+ +I++AN+L+ +YAK G +  A  VF ++   N
Sbjct: 149 FLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKN 208

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM++  A+    + A+ + R M       +SV+ ++VL  CAR G          
Sbjct: 209 VVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRP------ 262

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+++H  +I +G   DL +SN+L DMYAK+G +  A  +F +   R  VS
Sbjct: 263 ----------GKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVF-DTSLRDEVS 311

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
           +N++I G+ Q    ++++ L   M+  G + D V+ +  L AC     IK G+E      
Sbjct: 312 YNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLL 371

Query: 360 -----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +FD M +  V+SWN M+  Y        AI 
Sbjct: 372 RKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAID 431

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           LF  M+   V+ D  +   +LS+C+  G+LE G++
Sbjct: 432 LFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRK 466



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 193/420 (45%), Gaps = 55/420 (13%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H   +R GL  D F+ N LI++Y+K  ++  A ++F K+  K             
Sbjct: 161 AGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAK------------- 207

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                             NVVSWN +I+   +N  E  A+ +  +M + G +P  +T  +
Sbjct: 208 ------------------NVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTN 249

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   +  V  G+  H   I +G   +++V+NAL  +YAK G  K A  VF+  S  +
Sbjct: 250 VLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT-SLRD 308

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           EV++  ++ G ++T    E+L +F  M    +  D+VS    L  CA             
Sbjct: 309 EVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACA------------- 355

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                +    G+++H   ++  F   L ++NSLLD Y K G +  A  IF  +  + V S
Sbjct: 356 ---NLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVAS 412

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN MI GYG   +   AI+L + M+    E D V+ I +L AC   G ++ GR+ FD + 
Sbjct: 413 WNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELK 472

Query: 366 S----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           +    P+   +  M+    ++   +EA +L + +    + PD      +L +C   G LE
Sbjct: 473 ARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLP---IVPDANIWGALLGACRIYGNLE 529



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 145/296 (48%), Gaps = 3/296 (1%)

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           WN ++  YS +      ++++ +M   GV+PD  T   +L +CA    +  G++VH + +
Sbjct: 10  WNTLIRGYSIA-GVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI-EAF 490
           K     D +V + L+  Y  C     A RVF  +PE D+V WN+MI   S+N     +A 
Sbjct: 69  KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             F+ M    + P   + ++ L    +L     GR+VH    + G  +DIF+ ++LI+MY
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMY 188

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            K G    A   F  +  KN V+WN MI  +AQN +   AV L + M   G  P+ +TF 
Sbjct: 189 AKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFT 248

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
            +L AC+  GLV  G EI ++  +  G    L     + D   ++GH   A  + D
Sbjct: 249 NVLPACARMGLVRPGKEI-HARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFD 303



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           WN++I G S+  +       + QM +  + P   +F  VL +CA      +GR+VH  + 
Sbjct: 10  WNTLIRGYSIAGVG-GGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG-DEAV 591
           K G+ +D+FVG+ L+  Y  CG +  A + FD M  K+ V+WN MI  ++ NG+   +A+
Sbjct: 69  KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
            +++ MI  G+KP+ IT  + L           G E+  S  +  G+E  +     +ID 
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGS-SIRMGLESDIFIANSLIDM 187

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             ++GH  EA  +  ++  K + V W  ++++
Sbjct: 188 YAKSGHSTEASNVFYKLDAK-NVVSWNAMIAN 218



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 12/219 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  +LR       F+ N L++ Y+KC     A+++FD+M +KD+ SWN ++     
Sbjct: 363 GKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGM 422

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
             +L+ A  LF+ M + +V    VS+  ++SA    GL EK    ++++   G  PT + 
Sbjct: 423 LGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMH 482

Query: 123 LASVFK-ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS---LYAKCGWTKHAVPVF 178
            A +      A L  E      GL I    D NI+   ALL    +Y        A    
Sbjct: 483 YACMVDLLGRAGLMEEAAELIKGLPIVP--DANIW--GALLGACRIYGNLELAAWAAEHL 538

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
            E+   +   +T + +  A+T R  EA  +  LM  + V
Sbjct: 539 FELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGV 577



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 6/139 (4%)

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
           M H      WN +I GY+  G G   + +Y  M+  GV+PDD TF  +L AC+ +  V  
Sbjct: 1   MHHRTTAFLWNTLIRGYSIAGVGG-GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRK 59

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G E+  S+ +  G E  +     ++   G  G   +A  + DEMP K D V W  ++   
Sbjct: 60  GREVHGSV-VKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEK-DLVSWNTMIGVF 117

Query: 685 RLHANVRLAKRAAEELFRL 703
            ++       R A ++FRL
Sbjct: 118 SVNG---WHYRDALDMFRL 133


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 183/517 (35%), Positives = 290/517 (56%), Gaps = 27/517 (5%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAK------NGDMD-SAEVIFSNLPER--SVVSW 306
           G+ +H   I++G + DL+  N+L++MY+K      +G     A  +   + ER  SV + 
Sbjct: 127 GESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTA 186

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM--------LVACVRSGDIK--- 355
           +V++   G+K    +A       +S  FE  +V  I+         + AC     IK   
Sbjct: 187 SVLVGNQGRKVSDIEAFNYDVSCRSREFEA-QVLEIDYKPRSEYREMEACNLGQQIKDIS 245

Query: 356 ------TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
                 + R++F+ MP   + SWN +++  +++  + E + + REM    +KPD  TL+ 
Sbjct: 246 HSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSS 305

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L   A    +  GK++H  S++     + YVAS LI +Y+KC R   + RVF  + E D
Sbjct: 306 VLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERD 365

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
            + WNS+IAG   N L  E   FF+QM   ++ P  +SF++++ +CA L++   G+Q+H 
Sbjct: 366 GISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHG 425

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            I ++G+  +IF+ S+L++MY KCG+I  ARQ FD M  ++ V+W  MI G A +G+  +
Sbjct: 426 YITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALD 485

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+ L++ M   G++P+ + F+A+LTACSH+GLVD   + FNSM LD G+ P ++HY  + 
Sbjct: 486 AIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVS 545

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
           D LGRAG   EA   I  MP      +W  LLS+CR+H NV +A++ A  +  +DPKN+ 
Sbjct: 546 DLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTG 605

Query: 710 PYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            Y LLANIYS+  RW +    R  +    I K PA S
Sbjct: 606 AYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACS 642



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 218/476 (45%), Gaps = 90/476 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCN-------NTHSAQHLFDKMPHK------- 52
           G+ LH +I+R GL  D +  N L+ +YSK             A  + D+M  +       
Sbjct: 127 GESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTA 186

Query: 53  ------------DIYSWNAILSAQCKSDD-----LEFAYK-------------------- 75
                       DI ++N  +S  C+S +     LE  YK                    
Sbjct: 187 SVLVGNQGRKVSDIEAFNYDVS--CRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDI 244

Query: 76  -----------LFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                      +F+ MPE+++VSWN +I+   RNGL  + L++  +M      P   TL+
Sbjct: 245 SHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLS 304

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV       +D+  G+  HG  I+ GLD  +YVA++L+ +YAKC     +  VF  ++E 
Sbjct: 305 SVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTER 364

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + +++ ++++G  +     E L+ FR M+   +   S S SS++  CA            
Sbjct: 365 DGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAH----------- 413

Query: 245 QSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                    +H G+Q+H    + GF+ ++ +++SL+DMYAK G++ +A  IF  +  R +
Sbjct: 414 ------LTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDM 467

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           VSW  MI G      +  AIEL ++MK+ G EP+ V  + +L AC  +G +    + F+S
Sbjct: 468 VSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNS 527

Query: 364 MP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           M      +P V  + A+     ++   +EA      M    + P  +  A +LS+C
Sbjct: 528 MTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMP---IGPTGSVWATLLSAC 580



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 214/485 (44%), Gaps = 77/485 (15%)

Query: 75  KLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALL 134
           +LF+ +     ++W ++I     +GL  K+L  +  M   G  P H    SV KA   L+
Sbjct: 63  RLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLM 122

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH-------AVPVFEEMSEPNEV 187
           D+  G   HG +I++GLD ++Y  NAL+++Y+K  + K        A  V +EM+E    
Sbjct: 123 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRS 182

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
             TA +  +    R V  +E F       VS  S    + +         +E D   +S+
Sbjct: 183 VRTASVL-VGNQGRKVSDIEAFNY----DVSCRSREFEAQV---------LEIDYKPRSE 228

Query: 248 NKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            +     + GQQ+              +S+S+         +DS   IF  +PE+ +VSW
Sbjct: 229 YREMEACNLGQQIK------------DISHSM--------SVDSVRKIFEMMPEKDLVSW 268

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N +IAG  +     + + +++ M     +PD  T  ++L     + DI  G+E+      
Sbjct: 269 NTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIR 328

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        F  +      SWN++++   Q+    E +K 
Sbjct: 329 QGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKF 388

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           FR+M    +KP   + + I+ +CA +  L  GKQ+H    +     + ++AS L+ +Y+K
Sbjct: 389 FRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAK 448

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     A ++F R+   D+V W +MI G +L+   ++A   F+QM+   + P   +F  V
Sbjct: 449 CGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAV 508

Query: 512 LSSCA 516
           L++C+
Sbjct: 509 LTACS 513


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 188/609 (30%), Positives = 311/609 (51%), Gaps = 57/609 (9%)

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y KCG    A+ VF  +  PN V++T +++  A+     EAL  +R M+ + +  D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMY 282
               +GVC+           +  D K      GQ +H + ++    E D+ L  +L+ MY
Sbjct: 61  FVVAIGVCS-----------SSKDLK-----QGQLLHAMILETQLLEFDIILGTALITMY 104

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC---GFEPDEV 339
           A+  D++ A   F  + ++++V+WN +IAGY +      A+++ Q M S    G +PD +
Sbjct: 105 ARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAI 164

Query: 340 TSINMLVACVRSGDIKTGREM-----------------------------------FDSM 364
           T  + L AC   GDI  GRE+                                   FD +
Sbjct: 165 TFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
            +  V +WN M+S Y++     +A++LF+ M     KP+  T   +L++C  +  LE G+
Sbjct: 225 KNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGR 284

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRN-ELAERVFHRIPELDIVCWNSMIAGLSLN 483
            +H    +     D  + + L+ +Y+KC  + E A +VF R+   D++ WN +I      
Sbjct: 285 AIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQY 344

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               +A   FKQM+   + P + + + VLS+CA L +  QG+ VHA I       D+ + 
Sbjct: 345 GQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLE 404

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           ++L+ MY +CG +      F  +  K+ V+W+ +I  YAQ+G+    +  + +++  G+ 
Sbjct: 405 NSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLA 464

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
            DD+T V+ L+ACSH G++  GV+ F SM  DHG+ P   H+ CM+D L RAG    AE 
Sbjct: 465 ADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAEN 524

Query: 664 LIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS-APYSLLANIYSSLG 722
           LI +MP   D V W  LLS C+LH + + A R A++LF L+ ++  +  +LL+N+Y+  G
Sbjct: 525 LIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAG 584

Query: 723 RWDDLRAVR 731
           RWDD+R  R
Sbjct: 585 RWDDVRKTR 593



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/550 (25%), Positives = 260/550 (47%), Gaps = 58/550 (10%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A  +F  +   N VSW  +++A  RNG   +AL  Y +M  EG  P            ++
Sbjct: 11  ALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSS 70

Query: 133 LLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
             D++ G+  H ++++  L + +I +  AL+++YA+C   + A   F+EM +   VT+ A
Sbjct: 71  SKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNA 130

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKA---VSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           +++G ++      AL++++ M+ K+   +  D+++ SS L  C+     V  D+      
Sbjct: 131 LIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACS-----VVGDI------ 179

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                  G+++   T+  G+ +D  + N+L++MY+K G ++SA  +F  L  R V++WN 
Sbjct: 180 -----SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNT 234

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG----------- 357
           MI+GY ++  +T+A+EL QRM     +P+ VT I +L AC    D++ G           
Sbjct: 235 MISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHG 294

Query: 358 -------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                    R++F+ + +  V +WN ++ +Y Q    K+A+ +F
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIF 354

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           ++MQ   V P+  TL+ +LS+CA +G    GK VHA         D  + + L+ +Y++C
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              +    VF  I +  +V W+++IA  + +         F ++ Q  +     +  + L
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTL 474

Query: 513 SSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKN 570
           S+C+      +G Q    +  D G   D      ++++  + G +  A     DM    +
Sbjct: 475 SACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPD 534

Query: 571 TVTWNEMIHG 580
            V W  ++ G
Sbjct: 535 AVAWTSLLSG 544



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 234/520 (45%), Gaps = 89/520 (17%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+LLHA IL   L + D  L   LI +Y++C                             
Sbjct: 77  GQLLHAMILETQLLEFDIILGTALITMYARCR---------------------------- 108

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM---SNEGFVPTHIT 122
              DLE A K FDEM ++ +V+WN LI+   RNG    AL +Y  M   S EG  P  IT
Sbjct: 109 ---DLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAIT 165

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            +S   A + + D+  GR      +  G   +  V NAL+++Y+KCG  + A  VF+ + 
Sbjct: 166 FSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK 225

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + + +  M+SG AK     +ALE+F+ M       + V+   +L  C           
Sbjct: 226 NRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTAC----------- 274

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK-NGDMDSAEVIFSNLPER 301
                        G+ +H    + G+E+DL + N LL+MY K +  ++ A  +F  L  R
Sbjct: 275 -----TNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTR 329

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-- 359
            V++WN++I  Y Q  Q+  A+++ ++M+     P+E+T  N+L AC   G  + G+   
Sbjct: 330 DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVH 389

Query: 360 ---------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                            +F ++   S+ SW+ ++++Y+Q  + +
Sbjct: 390 ALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSR 449

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS-GL 445
             ++ F E+   G+  D  T+   LS+C+  G+L+ G Q   + +       +Y     +
Sbjct: 450 TGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCM 509

Query: 446 IGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNS 484
           + + S+  R E AE + H +P L D V W S+++G  L++
Sbjct: 510 VDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHN 549



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 209/395 (52%), Gaps = 14/395 (3%)

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           + G +     +F ++  P+  SW  ++++++++ +++EA+  +R M   G++PD     +
Sbjct: 4   KCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVV 63

Query: 410 ILSSCAAMGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
            +  C++   L+ G+ +HA  L+T     D  + + LI +Y++C+  ELA + F  + + 
Sbjct: 64  AIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKK 123

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE---MYPTQFSFATVLSSCAKLSSSFQGR 525
            +V WN++IAG S N     A   ++ M       M P   +F++ L +C+ +    QGR
Sbjct: 124 TLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGR 183

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           ++ A+    GY +D  V +ALI MY KCG +  AR+ FD +  ++ + WN MI GYA+ G
Sbjct: 184 EIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQG 243

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
              +A+ L++ M  +  KP+ +TF+ +LTAC++   ++ G  I   ++ +HG E  L   
Sbjct: 244 AATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVK-EHGYESDLVIG 302

Query: 646 TCMIDCLGR-AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
             +++   + +    EA  + + +  + D + W +L+ +   +     AK A +   ++ 
Sbjct: 303 NVLLNMYTKCSSSLEEARQVFERLRTR-DVITWNILIVA---YVQYGQAKDALDIFKQMQ 358

Query: 705 PKNSAPYSL-LANIYSS---LGRWDDLRAVRELMS 735
            +N AP  + L+N+ S+   LG     +AV  L++
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQGKAVHALIA 393



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/415 (21%), Positives = 179/415 (43%), Gaps = 67/415 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +  +G   D  + N L+ +Y+KC                              
Sbjct: 283 GRAIHRKVKEHGYESDLVIGNVLLNMYTKC------------------------------ 312

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S  LE A ++F+ +  R+V++WN LI A V+ G  + AL ++ +M  E   P  ITL++V
Sbjct: 313 SSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNV 372

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L     G+  H L+       ++ + N+L+++Y +CG     V VF  + + + 
Sbjct: 373 LSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSL 432

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC---GVESDVF 243
           V+++ +++  A+       LE F  ++++ ++ D V++ S L  C+  G    GV+S + 
Sbjct: 433 VSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLS 492

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERS 302
              D+                  G   D      ++D+ ++ G +++AE +  ++P    
Sbjct: 493 MVGDH------------------GLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPD 534

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML----VACVRSGDIKTGR 358
            V+W  +++G      + +A  +  ++     E DE +++ +L        R  D++  R
Sbjct: 535 AVAWTSLLSGCKLHNDTKRAARVADKLFELESE-DEHSTVTLLSNVYAEAGRWDDVRKTR 593

Query: 359 EMFDSMPSP---------SVSSWNAMLSSYSQSENHKEAIK-LFREMQFRGVKPD 403
               +  +P         +V  + A   S+ + E     IK L ++M+  G  PD
Sbjct: 594 NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPD 648


>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 197/585 (33%), Positives = 310/585 (52%), Gaps = 86/585 (14%)

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
           L K +++ EA+     + R+ + +DS +L+S+L  CA              D++  R   
Sbjct: 34  LCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCA--------------DSRALR--E 77

Query: 256 GQQVHCLTIKL-GFE-ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
           G++VH L +KL G +     LSN L++MYAK G    A  +F  +  R++ SWN M++GY
Sbjct: 78  GKRVH-LHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGY 136

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
                                               + G IK  R++FD MP   V SWN
Sbjct: 137 A-----------------------------------KLGMIKPARKLFDKMPEKDVVSWN 161

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK- 432
            M+ +++Q     EA++ + E +  G++ +  + A +L+ C  +  +   +QVH   L  
Sbjct: 162 TMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVA 221

Query: 433 --------TASHIDNYVASGLIGI----------------------YSKCQRNELAERVF 462
                   ++S +D YV  GL+G                       Y+K    + A  +F
Sbjct: 222 GFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELF 281

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             +PE + V W ++I+G + N +  +A   F +M    + P QF+F++ L +CA ++S  
Sbjct: 282 VEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLK 341

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGY 581
            G+Q+HA + +  +  +  V SALI+MY KCG +   R+ FD+M  K + V WN +I   
Sbjct: 342 HGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISAL 401

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           AQ+G G+EA+++  DM+ SG KPD ITFV IL ACSHSGLV  G+  F SM  D+G+ P 
Sbjct: 402 AQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPS 461

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
            +HY C+ID LGRAG F E    +++MP K D  +W  LL  CR+H ++ L ++AAE L 
Sbjct: 462 QEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLI 521

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            L+P++S  Y LL++IY+ LGRW+ ++ VR+LM+E  + K+ A S
Sbjct: 522 ELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAIS 566



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 224/450 (49%), Gaps = 33/450 (7%)

Query: 2   KAHVAGKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           +A   GK +H H+   GL    TFL N LI +Y+KC     A+ +FDKM  +++YSWN +
Sbjct: 73  RALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNM 132

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           LS   K   ++ A KLFD+MPE++VVSWN ++ A  + G  ++AL  Y++    G     
Sbjct: 133 LSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNG 192

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            + A V      L +V   R+ HG ++  G   N+ +++++L  Y KCG    A  +F+E
Sbjct: 193 FSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDE 252

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG--- 237
           MS  + + +T M+SG AK   +  A E+F  M  K    + VS ++++   AR G G   
Sbjct: 253 MSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEK----NPVSWTALISGYARNGMGHKA 308

Query: 238 -----------VESDVFAQSD-----NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDM 281
                      V  D F  S         +   HG+Q+H   +++ F+ +  + ++L+DM
Sbjct: 309 LELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDM 368

Query: 282 YAKNGDMDSAEVIFSNLPER-SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           Y+K G +     +F  +  +  VV WN +I+   Q     +AI++L  M   G +PD++T
Sbjct: 369 YSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKIT 428

Query: 341 SINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREM 395
            + +L AC  SG ++ G   F+SM       PS   +  ++    ++   +E +    +M
Sbjct: 429 FVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKM 488

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
            +   KPD      +L  C   G +E G++
Sbjct: 489 PY---KPDDRVWNALLGVCRIHGHIELGRK 515


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 196/624 (31%), Positives = 313/624 (50%), Gaps = 52/624 (8%)

Query: 160 ALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           +L+  +   G    A   F  ++ P       M+ G A  D  ++AL  +R M+      
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           D  +   VL  CAR G   E                G+  H   IKLG  AD++ +NSL+
Sbjct: 119 DRFTFPVVLKCCARAGALGE----------------GRAAHAAVIKLGLGADVYTANSLV 162

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK-SCGFEPDE 338
            +YAK G +  AE +F  +P R +VSWN M+ GY        A+   + M  +     D 
Sbjct: 163 ALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDS 222

Query: 339 VTSINMLVAC----------------VRSG---DIKTGREMFD----------------S 363
           V  I  L AC                +R G   D+K G  + D                 
Sbjct: 223 VGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAK 282

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           MP  +V +WN M+  Y+ +E   +A   F +M+  G + +  T   +L++CA       G
Sbjct: 283 MPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFG 342

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           + VHA  ++        + + L+ +Y K  + E +E++F +I +  +V WN+MIA     
Sbjct: 343 RSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYM 402

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
            +  EA   F ++    +YP  F+  TV+ +   L S  Q +Q+H+ I K GY +   + 
Sbjct: 403 EMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIM 462

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           +A++ MY +CG+I  +R+ FD M GK+ ++WN +I GYA +G G  A+ ++ +M  SG++
Sbjct: 463 NAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGME 522

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           P++ TFV++LTACS SGL   G + FNSMQ ++G+ P ++HY CM D LGRAG   E   
Sbjct: 523 PNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLR 582

Query: 664 LIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGR 723
            I+ MP      IW  LL++ R   ++ +A+ AAE +F+L+  N+  Y +L+++Y+  GR
Sbjct: 583 FIENMPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGR 642

Query: 724 WDDLRAVRELMSENCIVKDPAYSL 747
           W+D+  +R LM E  + +  A SL
Sbjct: 643 WEDVERIRSLMKEKGLRRTEARSL 666



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 241/515 (46%), Gaps = 53/515 (10%)

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           N +I       L   AL+ Y  M + G  P   T   V K       +  GR  H  VIK
Sbjct: 89  NVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIK 148

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
           +GL  ++Y AN+L++LYAK G    A  VF+ M   + V++  M+ G         AL  
Sbjct: 149 LGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALAC 208

Query: 209 FRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           FR M     V  DSV + + L  C  E                S    G+++H   I+ G
Sbjct: 209 FREMNDALQVGHDSVGVIAALAACCLE----------------SALALGREIHGYAIRHG 252

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
            E D+ +  SL+DMY K G++  AE +F+ +P R+VV+WN MI GY    +   A +   
Sbjct: 253 LEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFM 312

Query: 328 RMKSCGFEPDEVTSINMLVACVRS-----------------------------------G 352
           +M+  GF+ + VT+IN+L AC ++                                   G
Sbjct: 313 QMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVG 372

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            +++  ++F  +   ++ SWN M+++Y   E ++EAI LF E+  + + PD  T+  ++ 
Sbjct: 373 KVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVP 432

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +   +G +   KQ+H+  +K        + + ++ +Y++C     +  +F ++P  D++ 
Sbjct: 433 AFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVIS 492

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHAQI 531
           WN++I G +++     A   F +M+ + M P + +F +VL++C+      +G ++ ++  
Sbjct: 493 WNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQ 552

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++ G +  I     + ++  + G++    +F + M
Sbjct: 553 QEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENM 587



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 202/454 (44%), Gaps = 85/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  HA +++ GL  D +  N L+ LY+K      A+ +FD MP +DI SW         
Sbjct: 139 GRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSW--------- 189

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                 N ++   V NG+   AL+ + +M N+     H ++  +
Sbjct: 190 ----------------------NTMVDGYVSNGMGALALACFREM-NDALQVGHDSVGVI 226

Query: 127 FKASTALLD--VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
              +   L+  +  GR  HG  I+ GL++++ V  +L+ +Y KCG    A  VF +M   
Sbjct: 227 AALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLR 286

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
             VT+  M+ G A  +R V+A + F  M      ++ V+  ++L  CA+     ES +F 
Sbjct: 287 TVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQ----TESSLF- 341

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+ VH   ++  F   + L  +LL+MY K G ++S+E IF  + ++++V
Sbjct: 342 -----------GRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLV 390

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------- 349
           SWN MIA Y       +AI L   + +    PD  T   ++ A V               
Sbjct: 391 SWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYI 450

Query: 350 --------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               R G+I   RE+FD MP   V SWN ++  Y+     K A+
Sbjct: 451 VKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIAL 510

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           ++F EM+  G++P+ +T   +L++C+  G+   G
Sbjct: 511 EMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEG 544



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 174/394 (44%), Gaps = 52/394 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H + +R+GL  D  +   L+++Y KC N                            
Sbjct: 241 GREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVF-------------------------- 274

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                FA  +F +MP R VV+WN +I     N     A   + +M  +GF    +T  ++
Sbjct: 275 -----FAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINL 329

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A         GR  H  V++     ++ +  ALL +Y K G  + +  +F ++++   
Sbjct: 330 LTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTL 389

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M++     +   EA+ +F  ++ + +  D  ++++V          V + V   S
Sbjct: 390 VSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTV----------VPAFVLLGS 439

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             +       +Q+H   +KLG+     + N+++ MYA+ G++ ++  IF  +P + V+SW
Sbjct: 440 IRQC------KQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISW 493

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N +I GY    Q   A+E+   MK  G EP+E T +++L AC  SG    G + F+SM  
Sbjct: 494 NTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQ 553

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                P +  +  M     ++   +E ++    M
Sbjct: 554 EYGMIPQIEHYGCMTDLLGRAGELREVLRFIENM 587


>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
          Length = 818

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 212/710 (29%), Positives = 340/710 (47%), Gaps = 82/710 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  HA +L NG+  +  L  +L+ +Y  C     A+++F                    
Sbjct: 65  GRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIF-------------------- 104

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                +  +L+   P      WN +I      G  + AL  Y KM   G +P   T   V
Sbjct: 105 -----YQLRLWCSEP------WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYV 153

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L  V  GR  H  +  +G + +++V ++L+  Y++ G    A  +F+ M   + 
Sbjct: 154 IKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDG 213

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V +  M++G  K      A  +F  M R   + +SV+ + VL VCA       S++    
Sbjct: 214 VLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA-------SEIMIN- 265

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q+H L +  G E D  ++N+LL MYAK G +  A  +F  +P+  +V+W
Sbjct: 266 --------FGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTW 317

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML--------------VAC--VR 350
           N MI+GY Q     +A  L   M S G +PD +T  + L              + C  +R
Sbjct: 318 NGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIR 377

Query: 351 SG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
           +G                   D++   ++FD      +    AM+S Y  +  +  A+++
Sbjct: 378 NGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEI 437

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           FR +    ++ +  TLA +L +CA +  L  GK++H   LK       YV S ++ +Y+K
Sbjct: 438 FRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAK 497

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C + +LA + F  I   D VCWNSMI   S N    EA   F+QM          S +  
Sbjct: 498 CGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAA 557

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS+CA L +   G+++HA + +  + +D+F  SALI+MY KCG++  A + FDMM  KN 
Sbjct: 558 LSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNE 617

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           V+WN +I  Y  +G   +++ L+  M+  G++PD +TF+AI++AC H+G VD G+  F  
Sbjct: 618 VSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRC 677

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           M  + G+   ++HY CM+D  GRAG  +EA  +I+ MP   D  +W + L
Sbjct: 678 MTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGLYL 727



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 166/608 (27%), Positives = 278/608 (45%), Gaps = 61/608 (10%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM- 181
           L S+ +  T    + HGR+ H  ++  G+  N  +   LL +Y  CG    A  +F ++ 
Sbjct: 49  LVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 182 ---SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
              SEP    +  M+ G     +   AL  +  M+      D  +   V+  C     G+
Sbjct: 109 LWCSEP----WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACG----GL 160

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
            S               G+ VH     +GFE D+ + +SL+  Y++NG +  A  +F  +
Sbjct: 161 NSVAL------------GRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------- 349
           P +  V WNVM+ GY +      A  +   M+     P+ VT   +L  C          
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268

Query: 350 --------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                     + G +   R +FD MP   + +WN M+S Y Q+ 
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNG 328

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
              EA  LF EM   G+KPD  T +  L   +    L  GK++H   ++    +D ++ S
Sbjct: 329 FMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKS 388

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
            LI IY KC+  E+A ++F +   +DIV   +MI+G  LN ++  A   F+ + Q  M  
Sbjct: 389 ALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRA 448

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
              + A+VL +CA L++   G+++H  I K+G+    +VGSA+++MY KCG +  A Q F
Sbjct: 449 NSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTF 508

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
             +  K+ V WN MI   +QNG  +EA+ L++ M  +G K D ++  A L+AC++   + 
Sbjct: 509 IGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALH 568

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G EI ++  +       L   + +ID   + G+   A  + D M  K++ V W  ++++
Sbjct: 569 YGKEI-HAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNE-VSWNSIIAA 626

Query: 684 CRLHANVR 691
              H  ++
Sbjct: 627 YGNHGRLK 634


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 179/538 (33%), Positives = 291/538 (54%), Gaps = 36/538 (6%)

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           Q+  K  R   G+Q+H L I  G+     L+N L++MY+K G++D A  +F  +P+R++V
Sbjct: 13  QTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLV 72

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           SW  MI+G  Q  + ++AI     M+ CG  P +    + + AC   G I+ G++M    
Sbjct: 73  SWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLA 132

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          F+ MP     SW AM+  YS+    +EA+
Sbjct: 133 LKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEAL 192

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
             F++M    V  D+  L   L +C A+   + G+ VH++ +K     D +V + L  +Y
Sbjct: 193 LAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMY 252

Query: 450 SKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           SK    E A  VF    E  ++V +  +I G        +    F ++R+  + P +F+F
Sbjct: 253 SKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF 312

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           ++++ +CA  ++  QG Q+HAQ+ K  +  D FV S L++MY KCG +  A Q FD +  
Sbjct: 313 SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGD 372

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
              + WN ++  + Q+G G +A++ ++ M+  GVKP+ ITF+++LT CSH+GLV+ G++ 
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 432

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F SM   +GV P  +HY+C+ID LGRAG   EA+  I+ MP + +   W   L +CR+H 
Sbjct: 433 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +  + K AAE+L +L+PKNS    LL+NIY++  +W+D+R+VR  M +  + K P YS
Sbjct: 493 DKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYS 550



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 159/518 (30%), Positives = 248/518 (47%), Gaps = 91/518 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA ++  G    TFL N L+ +YSKC                              
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCG----------------------------- 54

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             +L+ A KLFD MP+RN+VSW  +IS L +N    +A+  +  M   G VPT    +S 
Sbjct: 55  --ELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSA 112

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A  +L  +E G++ H L +K G+   ++V + L  +Y+KCG    A  VFEEM   +E
Sbjct: 113 IRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDE 172

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC-AREGCGVESDVFAQ 245
           V++TAM+ G +K     EAL  F+ MI + V+ID   L S LG C A + C         
Sbjct: 173 VSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKAC--------- 223

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE-RSVV 304
              KF R+VH        +KLGFE+D+ + N+L DMY+K GDM+SA  +F    E R+VV
Sbjct: 224 ---KFGRSVHSS-----VVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVV 275

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           S+  +I GY +  Q  K + +   ++  G EP+E T  +++ AC     ++ G ++    
Sbjct: 276 SYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQV 335

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          FD +  P+  +WN+++S + Q    K+AI
Sbjct: 336 MKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAI 395

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI---DNYVASGLI 446
           K F  M  RGVKP+  T   +L+ C+  G++E G     +  KT   +   ++Y  S +I
Sbjct: 396 KFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHY--SCVI 453

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
            +  +  R + A+   +R+P E +   W S +    ++
Sbjct: 454 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIH 491



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 236/507 (46%), Gaps = 61/507 (12%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           LA V +       +  G++ H L+I  G     ++ N L+++Y+KCG   HA+ +F+ M 
Sbjct: 8   LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           + N V++TAM+SGL++  +  EA+  F  M          + SS +  CA  G  +E   
Sbjct: 68  QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG-SIE--- 123

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+Q+HCL +K G  ++L + ++L DMY+K G M  A  +F  +P + 
Sbjct: 124 ------------MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKD 171

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRM----------------------KSC-------- 332
            VSW  MI GY +  +  +A+   ++M                      K+C        
Sbjct: 172 EVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHS 231

Query: 333 -----GFEPDEVTSINMLVACVRSGDIKTGREMF--DSMPSPSVSSWNAMLSSYSQSENH 385
                GFE D      +     ++GD+++   +F  DS    +V S+  ++  Y ++E  
Sbjct: 232 SVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDS-ECRNVVSYTCLIDGYVETEQI 290

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++ + +F E++ +G++P+  T + ++ +CA    LE G Q+HA  +K     D +V+S L
Sbjct: 291 EKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSIL 350

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y KC   E A + F  I +   + WNS+++    + L  +A  FF++M    + P  
Sbjct: 351 VDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNA 410

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            +F ++L+ C+      +G      ++K  G V      S +I++  + G +  A++F +
Sbjct: 411 ITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFIN 470

Query: 565 MM-HGKNTVTWNEM-----IHGYAQNG 585
            M    N   W        IHG  + G
Sbjct: 471 RMPFEPNAFGWCSFLGACRIHGDKEMG 497



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 199/424 (46%), Gaps = 56/424 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   L+ G+  + F+ + L ++YSKC        +FD                   
Sbjct: 125 GKQMHCLALKFGIGSELFVGSNLEDMYSKCGA------MFD------------------- 159

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A K+F+EMP ++ VSW  +I    + G  E+AL  + KM +E        L S 
Sbjct: 160 ------ACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCST 213

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
             A  AL   + GR  H  V+K+G + +I+V NAL  +Y+K G  + A  VF   SE  N
Sbjct: 214 LGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRN 273

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++T ++ G  +T+++ + L +F  + R+ +  +  + SS++  CA +   +E      
Sbjct: 274 VVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQA-ALE------ 326

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G Q+H   +K+ F+ D  +S+ L+DMY K G ++ A   F  + + + ++
Sbjct: 327 ---------QGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIA 377

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN +++ +GQ      AI+  +RM   G +P+ +T I++L  C  +G ++ G + F SM 
Sbjct: 378 WNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMD 437

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P    ++ ++    ++   KEA +    M F   +P+       L +C   G  
Sbjct: 438 KTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF---EPNAFGWCSFLGACRIHGDK 494

Query: 421 ESGK 424
           E GK
Sbjct: 495 EMGK 498



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 126/236 (53%), Gaps = 11/236 (4%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D   LA ++ + A    L  GKQ+HA  +        ++ + L+ +YSKC   + A ++F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             +P+ ++V W +MI+GLS NS   EA   F  MR     PTQF+F++ + +CA L S  
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G+Q+H    K G  +++FVGS L +MY KCG ++ A + F+ M  K+ V+W  MI GY+
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS-----------HSGLVDVGVE 627
           + G  +EA+  +K MI   V  D     + L AC            HS +V +G E
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFE 239



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 153/333 (45%), Gaps = 49/333 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +H+ +++ G   D F+ N L ++YSK  +  SA ++F              +
Sbjct: 221 KACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFG-------------I 267

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
            ++C                 RNVVS+  LI   V     EK LSV+ ++  +G  P   
Sbjct: 268 DSEC-----------------RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T +S+ KA      +E G + H  V+KI  D++ +V++ L+ +Y KCG  +HA+  F+E+
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEI 370

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            +P E+ + +++S   +     +A++ F  M+ + V  ++++  S+L  C+  G   E  
Sbjct: 371 GDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL 430

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-E 300
            +  S +K    V G++              H S  ++D+  + G +  A+   + +P E
Sbjct: 431 DYFYSMDKTYGVVPGEE--------------HYS-CVIDLLGRAGRLKEAKEFINRMPFE 475

Query: 301 RSVVSWNVMIAG---YGQKYQSTKAIELLQRMK 330
            +   W   +     +G K     A E L +++
Sbjct: 476 PNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLE 508



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 2/175 (1%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           + A V+ + AK     +G+Q+HA +   GY    F+ + L+ MY KCG++  A + FD M
Sbjct: 7   ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             +N V+W  MI G +QN    EA+R +  M   G  P    F + + AC+  G +++G 
Sbjct: 67  PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           ++ + + L  G+   L   + + D   + G   +A  + +EMPCKD+ V W  ++
Sbjct: 127 QM-HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDE-VSWTAMI 179


>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
 gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 196/642 (30%), Positives = 329/642 (51%), Gaps = 54/642 (8%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV-TFTAMMSGLAKTDR 201
           H  ++ +GL +++ +  +L+++Y  C     A  VFE     ++V  + ++MSG +K   
Sbjct: 27  HQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSM 86

Query: 202 VVEALEMFRLMIRKAVSI-DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
             + LE+F+ ++  ++ + DS +  +V+                ++     R   G+ +H
Sbjct: 87  FHDTLEVFKRLLNCSICVPDSFTFPNVI----------------KAYGALGREFLGRMIH 130

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            L +K G+  D+ +++SL+ MYAK    +++  +F  +PER V SWN +I+ + Q  ++ 
Sbjct: 131 TLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAE 190

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG----------------------- 357
           KA+EL  RM+S GFEP+ V+    + AC R   ++ G                       
Sbjct: 191 KALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALV 250

Query: 358 ------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                       RE+F  MP  S+ +WN+M+  Y    + K  +++   M   G +P +T
Sbjct: 251 DMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQT 310

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           TL  IL +C+    L  GK +H   +++  + D YV   LI +Y KC    LAE VF + 
Sbjct: 311 TLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT 370

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
            +     WN MI+         +A   + QM    + P   +F +VL +C++L++  +G+
Sbjct: 371 QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGK 430

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           Q+H  I +     D  + SAL++MY KCG+   A + F+ +  K+ V+W  MI  Y  +G
Sbjct: 431 QIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHG 490

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
              EA+  + +M   G+KPD +T +A+L+AC H+GL+D G++ F+ M+  +G+EPI++HY
Sbjct: 491 QPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHY 550

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMP-CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           +CMID LGRAG   EA  +I + P   D+  +   L S+C LH    L  R A  L    
Sbjct: 551 SCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENY 610

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           P +++ Y +L N+Y+S   WD  R VR  M E  + K P  S
Sbjct: 611 PDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCS 652



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 166/587 (28%), Positives = 267/587 (45%), Gaps = 88/587 (14%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           KL+H  IL  GL  D  LC  LI +Y  C +  SA+H+F+     DI S           
Sbjct: 24  KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF---DIRS----------- 69

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF-VPTHITLASV 126
                           +V  WN+L+S   +N +    L V+ ++ N    VP   T  +V
Sbjct: 70  ----------------DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNV 113

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA  AL     GR  H LV+K G   ++ VA++L+ +YAK    ++++ VF+EM E + 
Sbjct: 114 IKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDV 173

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++  ++S   ++    +ALE+F  M       +SVSL+  +  C+R             
Sbjct: 174 ASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSR------------- 220

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+++H   +K GFE D +++++L+DMY K   ++ A  +F  +P +S+V+W
Sbjct: 221 ---LLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAW 277

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS--------------- 351
           N MI GY  K  S   +E+L RM   G  P + T  ++L+AC RS               
Sbjct: 278 NSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR 337

Query: 352 --------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                               G+      +F         SWN M+SSY    N  +A+++
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           + +M   GVKPD  T   +L +C+ +  LE GKQ+H +  ++    D  + S L+ +YSK
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   + A R+F+ IP+ D+V W  MI+    +    EA   F +M++  + P   +   V
Sbjct: 458 CGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAV 517

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
           LS+C       +G +  +Q+     +  I      IE Y    DI G
Sbjct: 518 LSACGHAGLIDEGLKFFSQMRSKYGIEPI------IEHYSCMIDILG 558



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 236/499 (47%), Gaps = 87/499 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H  ++++G   D  + + L+ +Y+K N       LF                    
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFN-------LF-------------------- 158

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               E + ++FDEMPER+V SWN +IS   ++G  EKAL ++ +M + GF P  ++L   
Sbjct: 159 ----ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVA 214

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + LL +E G+  H   +K G + + YV +AL+ +Y KC   + A  VF++M   + 
Sbjct: 215 ISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL 274

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + +M+ G          +E+   MI +       +L+S+L  C+R             
Sbjct: 275 VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR------------- 321

Query: 247 DNKFSRN-VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
               SRN +HG+ +H   I+    AD++++ SL+D+Y K G+ + AE +FS   +    S
Sbjct: 322 ----SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES 377

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
           WNVMI+ Y       KA+E+  +M S G +PD VT  ++L AC +   ++ G++      
Sbjct: 378 WNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437

Query: 360 -----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +F+S+P   V SW  M+S+Y      +EA+ 
Sbjct: 438 ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGI 448
            F EMQ  G+KPD  TL  +LS+C   G+++ G +   + +++   I+  +   S +I I
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFF-SQMRSKYGIEPIIEHYSCMIDI 556

Query: 449 YSKCQRNELAERVFHRIPE 467
             +  R   A  +  + PE
Sbjct: 557 LGRAGRLLEAYEIIQQTPE 575



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 48/297 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +++R+ +  D ++   LI+LY KC   + A+ +F K   KD+            
Sbjct: 328 GKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAE---------- 376

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                               SWN +IS+ +  G   KA+ VY++M + G  P  +T  SV
Sbjct: 377 --------------------SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSV 416

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + L  +E G++ H  + +  L+ +  + +ALL +Y+KCG  K A  +F  + + + 
Sbjct: 417 LPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDV 476

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
           V++T M+S      +  EAL  F  M +  +  D V+L +VL  C   G   E    F+Q
Sbjct: 477 VSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ 536

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
             +K+                G E  +   + ++D+  + G +  A  I    PE S
Sbjct: 537 MRSKY----------------GIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETS 577



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 8/207 (3%)

Query: 510 TVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           ++L  C   + S +  + VH +I   G   D+ +  +LI +Y  C D   AR  F+    
Sbjct: 8   SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67

Query: 569 KNTV-TWNEMIHGYAQNGYGDEAVRLYKDMIASGV-KPDDITFVAILTACSHSGLVDVGV 626
           ++ V  WN ++ GY++N    + + ++K ++   +  PD  TF  ++ A    G   +G 
Sbjct: 68  RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG- 126

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
            + +++ +  G    +   + ++    +   F  +  + DEMP + D   W  ++ SC  
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVI-SCFY 184

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSL 713
            +    A++A E   R++     P S+
Sbjct: 185 QSGE--AEKALELFGRMESSGFEPNSV 209


>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 640

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 187/588 (31%), Positives = 312/588 (53%), Gaps = 28/588 (4%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           N LL LY+K G   +A  +F+E  EPN   +TA++ G  + ++   A   F  M R+ + 
Sbjct: 40  NKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIV 99

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
             + +++SVL   +R G                R   G  V+ L ++ G+E DL + N +
Sbjct: 100 PLNFTIASVLKAVSRLG----------------RIKDGDLVYGLAVRCGYEFDLVVKNVM 143

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           ++++ + G+M SA  +F  + ER  VSWN MI GYG   +   A +L  RM+    E + 
Sbjct: 144 IELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRME----ERNV 199

Query: 339 VTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           ++  +M+   V++GD+   R +F+ MP   ++SW  M+S+Y    N   A  LF  M   
Sbjct: 200 ISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPIH 259

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
               D  T  +++S C   G +++ K+          ++ ++V   +I  Y K    + A
Sbjct: 260 ----DVGTWNLMISGCCKAGEMDAAKEFF--DRMQERNVASWVM--IIDGYIKVGDVDAA 311

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
             VF ++PE ++V W++MI G +       +   +K  ++  + P +     ++S+C++L
Sbjct: 312 RSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQL 371

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
                   V           ++ V ++LI+MY KCG+I  A Q F+M+  K+   ++ +I
Sbjct: 372 GVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVI 431

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
             +A +G  ++A+ L+ +M  + +KPD + F+ +LTAC+H GLV  G  +F  M  ++G+
Sbjct: 432 TAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGI 491

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
           +P   HY CM+D LGRAG   EA  LI  MP   +  +W  LLS+CR+H NV+LA+ AA 
Sbjct: 492 QPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQLAEAAAT 551

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ELF+++P NS  Y LL NIY+  G+WDD   VR ++ EN + K+   S
Sbjct: 552 ELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGSS 599



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 239/474 (50%), Gaps = 28/474 (5%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +L    K   + +A+KLFDE PE N   W  LI     N   E A + + KM  E  V
Sbjct: 40  NKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIV 99

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P + T+ASV KA + L  ++ G   +GL ++ G + ++ V N ++ L+ +CG    A  +
Sbjct: 100 PLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQM 159

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+EM E + V++ +M++G     RV  A ++F  M  + V    +S +S++    + G  
Sbjct: 160 FDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNV----ISWTSMIQGYVKAGDL 215

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           +E+ V       F R                E DL     ++  Y   G++ +A  +F  
Sbjct: 216 LEARVL------FERMP--------------EKDLASWKVMVSAYMSVGNLVAARNLFEL 255

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +P   V +WN+MI+G  +  +   A E   RM+    E +  + + ++   ++ GD+   
Sbjct: 256 MPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQ----ERNVASWVMIIDGYIKVGDVDAA 311

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R +FD MP  ++ +W+ M+  Y+++ +   ++KL++  + +G+KPD T    I+S+C+ +
Sbjct: 312 RSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQL 371

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
           G+ ++ + V    +  +   +  V + LI +Y+KC   E A +VF  + + D+ C++++I
Sbjct: 372 GVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVI 431

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
              + + L  +A   F +M++  + P   +F  VL++C       +GR++  Q+
Sbjct: 432 TAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQM 485



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 194/436 (44%), Gaps = 47/436 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G L++   +R G   D  + N +IEL+ +C    SA+ +FD+M  +D  SWN++++    
Sbjct: 121 GDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGN 180

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +  ++ A KLFD M ERNV+SW ++I   V+ G   +A  ++ +M  +      + +++ 
Sbjct: 181 NGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSAY 240

Query: 127 FK-----ASTALLDVE--HGRRCHGLVI----KIG------------LDKNIYVANALLS 163
                  A+  L ++   H      L+I    K G             ++N+     ++ 
Sbjct: 241 MSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIID 300

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
            Y K G    A  VF++M E N V ++ M+ G AKT     +L++++    + +  D   
Sbjct: 301 GYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETF 360

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
              ++  C++ G    +                + V C  +      +L +  SL+DMYA
Sbjct: 361 ALGIISACSQLGVPDTA----------------ESVICDFVGPSLFPNLQVVTSLIDMYA 404

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K G+++ A  +F  + ++ +  ++ +I  +     S  AI L   M+    +PD V  + 
Sbjct: 405 KCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLG 464

Query: 344 MLVACVRSGDIKTGREMFDSM-----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           +L AC   G +  GR +F  M       PS   +  M+    ++   +EA  L   M   
Sbjct: 465 VLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMP-- 522

Query: 399 GVKPDRTTLAIILSSC 414
            V P+ T    +LS+C
Sbjct: 523 -VAPNATVWGALLSAC 537


>gi|224146493|ref|XP_002326026.1| predicted protein [Populus trichocarpa]
 gi|222862901|gb|EEF00408.1| predicted protein [Populus trichocarpa]
          Length = 737

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 208/741 (28%), Positives = 348/741 (46%), Gaps = 102/741 (13%)

Query: 28  RLIELYSKCNNT---------HSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFD 78
           RL++L   C+           H+        P +  + +N I+S     + +  A+K+FD
Sbjct: 13  RLLQLLQSCSKLRALDTTKPLHALTITIGPNPEQSTFVYNNIISFYASFNQVPMAHKVFD 72

Query: 79  EMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEH 138
            MP RN VS+N++IS   + G  E+A   + +M + GF P + TL+ +   S A +DV  
Sbjct: 73  NMPHRNKVSYNSIISCFSKYGYLEEAWRTFCEMIDCGFRPNNFTLSGLL--SCASMDVGR 130

Query: 139 GRRCHGLVIKIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
           G     L IK GL   +++V  ALL L+ +CGW   A  VFE+M + + VT+ +M+S L 
Sbjct: 131 GIMLQALAIKNGLFCSDVFVGTALLGLFGRCGWLDEAFHVFEDMPDKSLVTWNSMISLLG 190

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
               V + + +FR ++RK  S+   S   VL           S +  + D +F     G 
Sbjct: 191 HHGFVEDCVVLFRKLVRKEGSLSKCSFEGVL-----------SGLVCEEDLEF-----GG 234

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           Q+H L IK G + ++ +SNSL++MYA+   M   E +F  +  R VV+WN +I+ + +  
Sbjct: 235 QIHGLVIKSGLDCEVLVSNSLINMYARRSSMSQVEKLFEEVDGRDVVTWNTIISAFSKSK 294

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------------------- 349
              KA+E+  +M   G  P++ T ++++ +C                             
Sbjct: 295 NPGKALEVFLKMSEDGIMPNQTTFVSVINSCTSLLVPMCGEYVHGKIVKTALETDVYLGS 354

Query: 350 -------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                  + G +      F  +   +V SWN+++  Y+   +   ++ L  EM   G +P
Sbjct: 355 ALVDYYAKCGKLDNAHYCFREIHQKNVVSWNSLILGYANKCSFA-SVSLLLEMLKLGFRP 413

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI---------------- 446
           +  + + +L S   + +    KQ+H+ +++     + YV + LI                
Sbjct: 414 NEFSFSAVLKSSLVLEL----KQIHSLTIRLGYENNEYVLTSLITSYGRNGLITDALIFV 469

Query: 447 ----------------GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
                           GIY++  +     +   ++ E D V WN +IA  + N    E F
Sbjct: 470 KASETLLAVVPANSIAGIYNRSGQYFETLKFLSQLEEPDTVSWNIVIAACARNGNYNEVF 529

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY-VNDIFVGSALIEM 549
             FK MR  +M P  +++ ++L   +K+ +   G  +H  + K  +   DI V + LI+M
Sbjct: 530 ELFKHMRVAQMLPDNYTYTSLLCVSSKVCNLALGSSIHGLLIKTNFSYFDIVVRNVLIDM 589

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y KCG++  + + FD M  +N +TW  +I     NG   EA+  + DM   G +PD + F
Sbjct: 590 YGKCGNLESSAKIFDSMTERNLITWTALISALGINGCAQEALERFNDMEFLGSRPDKVAF 649

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           +A+LTAC H  LV  G+++F  M  ++ +EP +DHY C++D L R GH  EAE +I  MP
Sbjct: 650 IAVLTACRHGALVREGMQLFGKMN-NYHIEPDMDHYHCLVDLLARNGHLEEAEKVISCMP 708

Query: 670 CKDDPVIWEVLLSSCRLHANV 690
              D  IW   L  C+   N 
Sbjct: 709 FPPDAQIWRSFLEGCKKRRNT 729



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 148/640 (23%), Positives = 268/640 (41%), Gaps = 114/640 (17%)

Query: 7   GKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G +L A  ++NGLF  D F+   L+ L+ +C     A H+F+ MP K + +WN+      
Sbjct: 131 GIMLQALAIKNGLFCSDVFVGTALLGLFGRCGWLDEAFHVFEDMPDKSLVTWNS------ 184

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    +IS L  +G  E  + ++ K+  +    +  +   
Sbjct: 185 -------------------------MISLLGHHGFVEDCVVLFRKLVRKEGSLSKCSFEG 219

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V        D+E G + HGLVIK GLD  + V+N+L+++YA+         +FEE+   +
Sbjct: 220 VLSGLVCEEDLEFGGQIHGLVIKSGLDCEVLVSNSLINMYARRSSMSQVEKLFEEVDGRD 279

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+  ++S  +K+    +ALE+F  M    +  +  +  SV+  C              
Sbjct: 280 VVTWNTIISAFSKSKNPGKALEVFLKMSEDGIMPNQTTFVSVINSCT------------- 326

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                   + G+ VH   +K   E D++L ++L+D YAK G +D+A   F  + +++VVS
Sbjct: 327 ---SLLVPMCGEYVHGKIVKTALETDVYLGSALVDYYAKCGKLDNAHYCFREIHQKNVVS 383

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV-------TSINMLVACVRSGDIKTGR 358
           WN +I GY  K  S  ++ LL  M   GF P+E        +S+ + +  + S  I+ G 
Sbjct: 384 WNSLILGYANKC-SFASVSLLLEMLKLGFRPNEFSFSAVLKSSLVLELKQIHSLTIRLGY 442

Query: 359 EMFDSMPSPSVSSW-------------------------NAMLSSYSQSENHKEAIK--- 390
           E  + + +  ++S+                         N++   Y++S  + E +K   
Sbjct: 443 ENNEYVLTSLITSYGRNGLITDALIFVKASETLLAVVPANSIAGIYNRSGQYFETLKFLS 502

Query: 391 ----------------------------LFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
                                       LF+ M+   + PD  T   +L   + +  L  
Sbjct: 503 QLEEPDTVSWNIVIAACARNGNYNEVFELFKHMRVAQMLPDNYTYTSLLCVSSKVCNLAL 562

Query: 423 GKQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           G  +H   +KT  S+ D  V + LI +Y KC   E + ++F  + E +++ W ++I+ L 
Sbjct: 563 GSSIHGLLIKTNFSYFDIVVRNVLIDMYGKCGNLESSAKIFDSMTERNLITWTALISALG 622

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
           +N    EA   F  M      P + +F  VL++C   +   +G Q+  ++       D+ 
Sbjct: 623 INGCAQEALERFNDMEFLGSRPDKVAFIAVLTACRHGALVREGMQLFGKMNNYHIEPDMD 682

Query: 542 VGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHG 580
               L+++  + G +  A +    M    +   W   + G
Sbjct: 683 HYHCLVDLLARNGHLEEAEKVISCMPFPPDAQIWRSFLEG 722



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/447 (22%), Positives = 194/447 (43%), Gaps = 92/447 (20%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G+ +H  I++  L  D +L + L++ Y+KC    +A + F ++  K++ SWN+++   
Sbjct: 332 MCGEYVHGKIVKTALETDVYLGSALVDYYAKCGKLDNAHYCFREIHQKNVVSWNSLI--- 388

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                L +A                        N     ++S+  +M   GF P   + +
Sbjct: 389 -----LGYA------------------------NKCSFASVSLLLEMLKLGFRPNEFSFS 419

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA---------- 174
           +V K+S  L      ++ H L I++G + N YV  +L++ Y + G    A          
Sbjct: 420 AVLKSSLVL----ELKQIHSLTIRLGYENNEYVLTSLITSYGRNGLITDALIFVKASETL 475

Query: 175 ---VPV-------------FE------EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
              VP              FE      ++ EP+ V++  +++  A+     E  E+F+ M
Sbjct: 476 LAVVPANSIAGIYNRSGQYFETLKFLSQLEEPDTVSWNIVIAACARNGNYNEVFELFKHM 535

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA-D 271
               +  D+ + +S+L V                 +K      G  +H L IK  F   D
Sbjct: 536 RVAQMLPDNYTYTSLLCV----------------SSKVCNLALGSSIHGLLIKTNFSYFD 579

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + + N L+DMY K G+++S+  IF ++ ER++++W  +I+  G    + +A+E    M+ 
Sbjct: 580 IVVRNVLIDMYGKCGNLESSAKIFDSMTERNLITWTALISALGINGCAQEALERFNDMEF 639

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS----PSVSSWNAMLSSYSQSENHKE 387
            G  PD+V  I +L AC     ++ G ++F  M +    P +  ++ ++   +++ + +E
Sbjct: 640 LGSRPDKVAFIAVLTACRHGALVREGMQLFGKMNNYHIEPDMDHYHCLVDLLARNGHLEE 699

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSC 414
           A K+   M F    PD       L  C
Sbjct: 700 AEKVISCMPF---PPDAQIWRSFLEGC 723


>gi|449451906|ref|XP_004143701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 759

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 214/781 (27%), Positives = 381/781 (48%), Gaps = 87/781 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+ + G  +H H+ + G   DTF  N L+++Y +C                         
Sbjct: 26  KSLILGAQVHGHMCKLGFDYDTFSMNNLLKMYFRCG------------------------ 61

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
              C+       +K+F+EMP+RNVVSW+ +IS+L  NG  E  L  + +M  +G +PT  
Sbjct: 62  -FMCE------GFKVFEEMPQRNVVSWSLIISSLSENGEFELCLESFLEMMRDGLMPTEF 114

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
              SV KA   +     G   H L  KIG+++N++V  + LS+YA+ G    A  VFE M
Sbjct: 115 AFGSVMKACADVEAYGFGSGVHCLSWKIGMEQNVFVGGSTLSMYARLGDITSAELVFEWM 174

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + +   + AM+ G       +EAL    L+  + + +D+ ++     V A + C +  D
Sbjct: 175 EKVDVGCWNAMIGGYTHCGLGLEALNAVSLLNSEGIKMDNFTI-----VSAVKACSLIQD 229

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           + +           G+++H   ++ G  +   + N+L+DMY  +   +S   IF+++  R
Sbjct: 230 LDS-----------GKELHGFILRRGLISTAAM-NALMDMYLISDRKNSVLKIFNSMQTR 277

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-- 359
            ++SWN +   +G      + ++L  +    G +P+ +T   +   C    D + G +  
Sbjct: 278 DIISWNTV---FGGSSNEKEIVDLFGKFVIEGMKPNHITFSVLFRQCGVLLDSRLGFQFF 334

Query: 360 ---------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                            +FDS+    VS+WN  + +YS +    
Sbjct: 335 SLAVHLGFLDETRVLSSIISMFSQFGLMEMVHSVFDSLVFKPVSAWNQFILAYSSNSFEM 394

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA + F  +   GV  +  T +II+ +          +Q+H AS+K       YV+  LI
Sbjct: 395 EAFRTFSSLLRYGVVANEYTFSIIIETACKFENPWMCRQLHCASMKAGFGSHKYVSCSLI 454

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
             Y      E +  +F+++  +D+  + ++I+ L   +   EA MF   + ++   P +F
Sbjct: 455 KCYILIGSLESSFEIFNQLEIVDMATYGAVISTLVHQNYMYEAIMFLNFLMESGKKPDEF 514

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM- 565
           +F ++L+ C+  ++  Q + +H+ +EK G+   + V SA+I+ Y KCGDI  A+  F+  
Sbjct: 515 TFGSILNGCSSRAAYHQTKAIHSLVEKMGFGFHVHVASAIIDAYAKCGDIGSAQGAFEQS 574

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
               + + +N M+  YA +G   EA++ ++ M  + V+P   +FV++++AC H GLV+ G
Sbjct: 575 CQSNDVIVYNSMMMAYAHHGLAWEAIQTFEKMRIAKVQPSQASFVSVISACRHMGLVEQG 634

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
             +F +M+ D+ + P  D+Y C++D L R G  ++A  +I+ MP    P I   LLS CR
Sbjct: 635 RSLFQTMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARYIIESMPFSPWPAILRSLLSGCR 694

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
           ++ NV L +  AE+L  L P+N A + LL+ +YS    W+D   +R+ M++  ++KDP Y
Sbjct: 695 IYGNVELGQWTAEKLLSLAPQNLATHVLLSKVYSEGNSWEDAANIRKEMTDRGVLKDPGY 754

Query: 746 S 746
           S
Sbjct: 755 S 755



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 241/530 (45%), Gaps = 53/530 (10%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+A+    S     +  G + HG + K+G D + +  N LL +Y +CG+      VFEEM
Sbjct: 14  TIATALSLSENTKSLILGAQVHGHMCKLGFDYDTFSMNNLLKMYFRCGFMCEGFKVFEEM 73

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + N V+++ ++S L++       LE F  M+R  +     +  SV+  CA     VE+ 
Sbjct: 74  PQRNVVSWSLIISSLSENGEFELCLESFLEMMRDGLMPTEFAFGSVMKACAD----VEAY 129

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
            F            G  VHCL+ K+G E ++ +  S L MYA+ GD+ SAE++F  + + 
Sbjct: 130 GF------------GSGVHCLSWKIGMEQNVFVGGSTLSMYARLGDITSAELVFEWMEKV 177

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM- 360
            V  WN MI GY       +A+  +  + S G + D  T ++ + AC    D+ +G+E+ 
Sbjct: 178 DVGCWNAMIGGYTHCGLGLEALNAVSLLNSEGIKMDNFTIVSAVKACSLIQDLDSGKELH 237

Query: 361 ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                            F+SM +  + SWN +   +  S N KE
Sbjct: 238 GFILRRGLISTAAMNALMDMYLISDRKNSVLKIFNSMQTRDIISWNTV---FGGSSNEKE 294

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
            + LF +    G+KP+  T +++   C  +     G Q  + ++      +  V S +I 
Sbjct: 295 IVDLFGKFVIEGMKPNHITFSVLFRQCGVLLDSRLGFQFFSLAVHLGFLDETRVLSSIIS 354

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           ++S+    E+   VF  +    +  WN  I   S NS ++EAF  F  + +  +   +++
Sbjct: 355 MFSQFGLMEMVHSVFDSLVFKPVSAWNQFILAYSSNSFEMEAFRTFSSLLRYGVVANEYT 414

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           F+ ++ +  K  + +  RQ+H    K G+ +  +V  +LI+ Y   G +  + + F+ + 
Sbjct: 415 FSIIIETACKFENPWMCRQLHCASMKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQLE 474

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
             +  T+  +I       Y  EA+     ++ SG KPD+ TF +IL  CS
Sbjct: 475 IVDMATYGAVISTLVHQNYMYEAIMFLNFLMESGKKPDEFTFGSILNGCS 524



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 116/229 (50%), Gaps = 6/229 (2%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  T+A  LS       L  G QVH    K     D +  + L+ +Y +C       +VF
Sbjct: 11  DPKTIATALSLSENTKSLILGAQVHGHMCKLGFDYDTFSMNNLLKMYFRCGFMCEGFKVF 70

Query: 463 HRIPELDIVCWNSMIAGLSLNS---LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
             +P+ ++V W+ +I+ LS N    L +E+F+   +M ++ + PT+F+F +V+ +CA + 
Sbjct: 71  EEMPQRNVVSWSLIISSLSENGEFELCLESFL---EMMRDGLMPTEFAFGSVMKACADVE 127

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +   G  VH    K G   ++FVG + + MY + GDI  A   F+ M   +   WN MI 
Sbjct: 128 AYGFGSGVHCLSWKIGMEQNVFVGGSTLSMYARLGDITSAELVFEWMEKVDVGCWNAMIG 187

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           GY   G G EA+     + + G+K D+ T V+ + ACS    +D G E+
Sbjct: 188 GYTHCGLGLEALNAVSLLNSEGIKMDNFTIVSAVKACSLIQDLDSGKEL 236



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 2/175 (1%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           + AT LS      S   G QVH  + K G+  D F  + L++MY +CG +    + F+ M
Sbjct: 14  TIATALSLSENTKSLILGAQVHGHMCKLGFDYDTFSMNNLLKMYFRCGFMCEGFKVFEEM 73

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             +N V+W+ +I   ++NG  +  +  + +M+  G+ P +  F +++ AC+       G 
Sbjct: 74  PQRNVVSWSLIISSLSENGEFELCLESFLEMMRDGLMPTEFAFGSVMKACADVEAYGFGS 133

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            + + +    G+E  +      +    R G    AE++ + M  K D   W  ++
Sbjct: 134 GV-HCLSWKIGMEQNVFVGGSTLSMYARLGDITSAELVFEWME-KVDVGCWNAMI 186



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 47/231 (20%), Positives = 96/231 (41%), Gaps = 42/231 (18%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           + A+   K +H+ + + G      + + +I+ Y+KC +  SAQ  F++            
Sbjct: 526 RAAYHQTKAIHSLVEKMGFGFHVHVASAIIDAYAKCGDIGSAQGAFEQ------------ 573

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
               C+S+D               V+ +N+++ A   +GL  +A+  + KM      P+ 
Sbjct: 574 ---SCQSND---------------VIVYNSMMMAYAHHGLAWEAIQTFEKMRIAKVQPSQ 615

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVA----NALLSLYAKCGWTKHAVP 176
            +  SV  A   +  VE GR    L   +  D N+  +      L+ + ++ G+   A  
Sbjct: 616 ASFVSVISACRHMGLVEQGRS---LFQTMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARY 672

Query: 177 VFEEMS-EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS 226
           + E M   P      +++SG     R+   +E+ +    K +S+   +L++
Sbjct: 673 IIESMPFSPWPAILRSLLSGC----RIYGNVELGQWTAEKLLSLAPQNLAT 719


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 184/508 (36%), Positives = 280/508 (55%), Gaps = 37/508 (7%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+++  YAK      A  +F  +PE  +VS+N +I+ Y    ++  A+ L   M+  G +
Sbjct: 78  NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137

Query: 336 PDEVTSINMLVACV---------------------------------RSGDIKTGREMFD 362
            D  T   ++ AC                                  ++GD+   + +F 
Sbjct: 138 MDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFY 197

Query: 363 SMPS-PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
            M       SWN+M+ +Y Q +   +A+ LF+EM  RG+  D  TLA +L++   +  L 
Sbjct: 198 GMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLS 257

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN-ELAERVFHRIPELDIVCWNSMIAGL 480
            G Q H   +KT  H +++V SGLI +YSKC        +VF  I E D+V WN+M++G 
Sbjct: 258 GGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGY 317

Query: 481 SLNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA-QIEKDGYVN 538
           S N   +E A   F+QM+     P   SF  V+S+C+ LSS  QG+Q+H+  ++ D   N
Sbjct: 318 SQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSN 377

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
            I V +ALI MY KCG++  AR+ FD M   NTV+ N MI GYAQ+G   E++ L++ M+
Sbjct: 378 RISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWML 437

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
              + P  ITF+++L+AC+H+G V+ G   FN M+    +EP  +HY+CMID LGRAG  
Sbjct: 438 ERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKL 497

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
            EAE LI  MP     + W  LL +CR H N+ LA +AA ++ +L+P N+APY +L+N+Y
Sbjct: 498 SEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMY 557

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +S GRW+++  VR+ M +  + K P  S
Sbjct: 558 ASAGRWEEVATVRKFMRDRGVKKKPGCS 585



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 159/586 (27%), Positives = 261/586 (44%), Gaps = 132/586 (22%)

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           + K   A  D+  G+  H L IK  +  + Y +N  + LY+KCG    A   F+++S+PN
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 186 EVTFTAMMSGLAKTDR-------------------------------VVEALEMFRLMIR 214
             +F A+++  AK  R                                  AL +F  M  
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
             + +D  +LS+V+  C         DV           + G Q+H + +  GF++ + +
Sbjct: 134 MGLDMDXFTLSAVITACC-------DDV----------GLIG-QLHSVAVSSGFDSYVSV 175

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           +N+LL  Y KNGD+D A+ +F  +   R  VSWN MI  YGQ  + +KA+ L Q M   G
Sbjct: 176 NNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRG 235

Query: 334 FEPDEVTSINMLVA--CVR--SGD-------IKTG------------------------- 357
              D  T  ++L A  C+   SG        IKTG                         
Sbjct: 236 LNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDC 295

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKE-AIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           R++F+ +  P +  WN M+S YSQ+E   E A++ FR+MQ  G +P+  +   ++S+C+ 
Sbjct: 296 RKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSN 355

Query: 417 MGILESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
           +     GKQ+H+ +LK+    +   V + LI +YSKC   + A R+F R+ E + V  NS
Sbjct: 356 LSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNS 415

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MIAG + + +++E+   F+ M + ++ PT  +F +VLS+CA           H    ++G
Sbjct: 416 MIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACA-----------HTGRVEEG 464

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT-----WNEMIHGYAQNGYGDEA 590
           +                         +F+MM  K  +      ++ MI    + G   EA
Sbjct: 465 W------------------------NYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEA 500

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS-MQLD 635
             L   M      P  I + ++L AC   G +++ V+  N  +QL+
Sbjct: 501 ENLIARM---PFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLE 543



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 217/458 (47%), Gaps = 61/458 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH+  +++ +   T+  N  I LYSKC     A+  F  +   +++S+NAI++A  K
Sbjct: 27  GKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAK 86

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A++LFD++PE ++VS+N LISA    G    AL +++ M   G      TL++V
Sbjct: 87  ESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAV 146

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
             A     DV    + H + +  G D  + V NALL+ Y K G    A  VF  M    +
Sbjct: 147 ITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRD 204

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG--VCAREGCGVESDVF 243
           EV++ +M+    +     +AL +F+ M+R+ +++D  +L+SVL    C  +  G      
Sbjct: 205 EVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSG------ 258

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK-NGDMDSAEVIFSNLPERS 302
                       G Q H   IK GF  + H+ + L+D+Y+K  G M     +F  + E  
Sbjct: 259 ------------GLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPD 306

Query: 303 VVSWNVMIAGYGQKYQSTK-AIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
           +V WN M++GY Q  +  + A+E  ++M+  G+ P++ + + ++ AC             
Sbjct: 307 LVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIH 366

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G+++  R +FD M   +  S N+M++ Y+Q    
Sbjct: 367 SLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIE 426

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            E++ LF+ M  R + P   T   +LS+CA  G +E G
Sbjct: 427 MESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG 464



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 202/420 (48%), Gaps = 48/420 (11%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ +H L IK       + SN  + +Y+K G +  A   F ++ + +V S+N +IA Y +
Sbjct: 27  GKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAK 86

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
           + +   A                                    ++FD +P P + S+N +
Sbjct: 87  ESRPLIA-----------------------------------HQLFDQIPEPDLVSYNTL 111

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTL-AIILSSCAAMGILESGKQVHAASLKTA 434
           +S+Y+       A+ LF  M+  G+  D  TL A+I + C  +G++    Q+H  S+  +
Sbjct: 112 ISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLI---GQLH--SVAVS 166

Query: 435 SHIDNYVA--SGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFM 491
           S  D+YV+  + L+  Y K    + A+RVF+ +  + D V WNSMI     +    +A  
Sbjct: 167 SGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALG 226

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            F++M +  +    F+ A+VL++   L     G Q H Q+ K G+  +  VGS LI++Y 
Sbjct: 227 LFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYS 286

Query: 552 KC-GDIYGARQFFDMMHGKNTVTWNEMIHGYAQN-GYGDEAVRLYKDMIASGVKPDDITF 609
           KC G +   R+ F+ +   + V WN M+ GY+QN  + ++A+  ++ M   G +P+D +F
Sbjct: 287 KCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSF 346

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEP-ILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           V +++ACS+      G +I +S+ L   +    +     +I    + G+  +A  L D M
Sbjct: 347 VCVISACSNLSSPSQGKQI-HSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM 405



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 159/362 (43%), Gaps = 54/362 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G   H  +++ G   ++ + + LI+LYSKC    S                       C
Sbjct: 258 GGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMS----------------------DC 295

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNG-LEEKALSVYNKMSNEGFVPTHITLA 124
           +        K+F+E+ E ++V WN ++S   +N    E AL  + +M   G+ P   +  
Sbjct: 296 R--------KVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFV 347

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            V  A + L     G++ H L +K  +  N I V NAL+++Y+KCG  + A  +F+ M+E
Sbjct: 348 CVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE 407

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DV 242
            N V+  +M++G A+    +E+L +F+ M+ + ++  S++  SVL  CA  G   E  + 
Sbjct: 408 HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNY 467

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
           F     KF+     +   C                ++D+  + G +  AE + + +P   
Sbjct: 468 FNMMKEKFNIEPEAEHYSC----------------MIDLLGRAGKLSEAENLIARMPFNP 511

Query: 302 SVVSWNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
             + W  ++     +G    + KA   + +++     P  V S NM  +  R  ++ T R
Sbjct: 512 GSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLS-NMYASAGRWEEVATVR 570

Query: 359 EM 360
           + 
Sbjct: 571 KF 572



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 140/316 (44%), Gaps = 57/316 (18%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC----------------- 452
           +L +C A   L +GK +H+  +K+      Y ++  I +YSKC                 
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 453 --------------QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
                          R  +A ++F +IPE D+V +N++I+  +       A   F  MR+
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
             +    F+ + V+++C        G Q+H+     G+ + + V +AL+  Y K GD+  
Sbjct: 134 MGLDMDXFTLSAVITACCD-DVGLIG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191

Query: 559 ARQFFDMMHG-KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
           A++ F  M G ++ V+WN MI  Y Q+  G +A+ L+++M+  G+  D  T  ++LTA +
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251

Query: 618 -----------HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
                      H  L+  G       Q  H    ++D Y+    C    G   +   + +
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFH-----QNSHVGSGLIDLYS---KC---GGGMSDCRKVFE 300

Query: 667 EMPCKDDPVIWEVLLS 682
           E+  + D V+W  ++S
Sbjct: 301 EIT-EPDLVLWNTMVS 315



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 88/236 (37%), Gaps = 36/236 (15%)

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
           N++  T   F  +L +C        G+ +H+   K       +  +  I +Y KCG +  
Sbjct: 2   NQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAW 61

Query: 559 AR-------------------------------QFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           AR                               Q FD +   + V++N +I  YA  G  
Sbjct: 62  ARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGET 121

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG-VEIFNSMQLDHGVEPILDHYT 646
             A+ L+  M   G+  D  T  A++TAC      DVG +   +S+ +  G +  +    
Sbjct: 122 APALGLFSGMREMGLDMDXFTLSAVITACCD----DVGLIGQLHSVAVSSGFDSYVSVNN 177

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
            ++   G+ G   +A+ +   M    D V W  ++ +   H     A    +E+ R
Sbjct: 178 ALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR 233


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 208/699 (29%), Positives = 336/699 (48%), Gaps = 106/699 (15%)

Query: 48  KMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSV 107
           ++   DI  WN  +S   ++   + A  +F+ MP R+ VS+N +IS  +RN     A ++
Sbjct: 43  RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102

Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
           +++M                                        +++++  N +L+ Y +
Sbjct: 103 FDQMP---------------------------------------ERDLFSWNVMLTGYVR 123

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
                 A  +F+ M E + V++ +++SG A+   V EA E+F  M  K    +S+S + +
Sbjct: 124 NCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGL 179

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           L      G   E+                    CL  +   + DL   N L+  + +   
Sbjct: 180 LAAYVHNGRIEEA--------------------CLLFESKSDWDLISWNCLMGGFVRKKK 219

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           +  A  +F  +P R  +SWN MI+GY Q    ++A  L     +     D  T   M+  
Sbjct: 220 LGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPT----RDVFTWTAMVSG 275

Query: 348 CVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
            V++G +   +  FD MP  +  S+NAM++ Y Q++    A +LF  M  R +    T +
Sbjct: 276 YVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMI 335

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
                                               G IG  ++      A + F  +P+
Sbjct: 336 ---------------------------------TGYGQIGDIAQ------ARKFFDMMPQ 356

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            D V W ++IAG + +    EA   F +++Q+     + +F   LS+CA +++   G+Q+
Sbjct: 357 RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQI 416

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H Q  K GY    FVG+AL+ MY KCG I  A   F+ +  K+ V+WN M+ GYA++G+G
Sbjct: 417 HGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFG 476

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
            +A+ +++ M  +GVKPD+IT V +L+ACSH+GL+D G E F SM  D+GV P   HYTC
Sbjct: 477 RQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTC 536

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
           MID LGRAG   EA+ LI  MP +     W  LL + R+H N  L ++AAE +F+++P+N
Sbjct: 537 MIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQN 596

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           S  Y LL+N+Y++ GRW D   +R  M +  + K P YS
Sbjct: 597 SGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYS 635



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 270/573 (47%), Gaps = 47/573 (8%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           D    N+ I  + +  +  SA H+F+ MP +   S+NA++S   ++     A  LFD+MP
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
           ER++ SWN +++  VRN     A  +++ M  +  V  +  L+   +       V+  R 
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGY----VDEARE 163

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
               V     +KN    N LL+ Y   G  + A  +FE  S+ + +++  +M G  +  +
Sbjct: 164 ----VFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKK 219

Query: 202 VVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
           + +A  +F ++ +R A+S +++    + G     G      +F +S  +           
Sbjct: 220 LGDARWLFDKMPVRDAISWNTM----ISGYAQGGGLSQARRLFDESPTR----------- 264

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
                     D+    +++  Y +NG +D A+  F  +PE++ VS+N MIAGY Q  +  
Sbjct: 265 ----------DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMD 314

Query: 321 KAIELLQRMKSCGFEPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
            A EL + M         ++S N M+    + GDI   R+ FD MP     SW A+++ Y
Sbjct: 315 IARELFESMPC-----RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGY 369

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           +QS +++EA+ +F E++  G   +R T    LS+CA +  LE GKQ+H  ++K       
Sbjct: 370 AQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGC 429

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           +V + L+ +Y KC   + A   F  I E D+V WN+M+AG + +    +A   F+ M+  
Sbjct: 430 FVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTA 489

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYG 558
            + P + +   VLS+C+      +G +    + KD G +      + +I++  + G +  
Sbjct: 490 GVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEE 549

Query: 559 ARQFF-DMMHGKNTVTWNEM-----IHGYAQNG 585
           A+    +M       +W  +     IHG  + G
Sbjct: 550 AQDLIRNMPFQPGAASWGALLGASRIHGNTELG 582



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 225/503 (44%), Gaps = 83/503 (16%)

Query: 3   AHVAGKLLHAHI-LRNGLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYS 56
           A ++G L ++   L   LFD     D F  N ++  Y +      A+ LFD MP KD+ S
Sbjct: 85  AMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVS 144

Query: 57  WNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
           WN++LS   ++  ++ A ++FD MPE+N +SWN L++A V NG  E+A  ++   S+   
Sbjct: 145 WNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL 204

Query: 117 VPTHITLASVFKA-----STALLD-------VEHGRRCHGLVIKIGLD-----------K 153
           +  +  +    +      +  L D       +       G     GL            +
Sbjct: 205 ISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR 264

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
           +++   A++S Y + G    A   F+EM E NEV++ AM++G  +T ++  A E+F  M 
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMP 324

Query: 214 RKAVSI---------------------------DSVSLSSVLGVCAREGCGVES-DVFA- 244
            + +S                            D VS ++++   A+ G   E+ ++F  
Sbjct: 325 CRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE 384

Query: 245 --QSDNKFSRNVH---------------GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
             Q     +R                  G+Q+H   +K+G+     + N+LL MY K G 
Sbjct: 385 IKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGS 444

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           +D A   F  + E+ VVSWN M+AGY +     +A+ + + MK+ G +PDE+T + +L A
Sbjct: 445 IDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSA 504

Query: 348 CVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
           C  +G +  G E F SM       P+   +  M+    ++   +EA  L R M F   +P
Sbjct: 505 CSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF---QP 561

Query: 403 DRTTLAIILSSCAAMGILESGKQ 425
              +   +L +    G  E G++
Sbjct: 562 GAASWGALLGASRIHGNTELGEK 584



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 153/332 (46%), Gaps = 31/332 (9%)

Query: 15  LRNGLFDD--TFL----------CNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           ++NG+ D+  TF            N +I  Y +      A+ LF+ MP ++I SWN +++
Sbjct: 277 VQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMIT 336

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              +  D+  A K FD MP+R+ VSW  +I+   ++G  E+AL+++ ++  +G      T
Sbjct: 337 GYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRAT 396

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
                     +  +E G++ HG  +K+G     +V NALL++Y KCG    A   FE + 
Sbjct: 397 FGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIE 456

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           E + V++  M++G A+     +AL +F  M    V  D +++  VL  C+  G       
Sbjct: 457 EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGL------ 510

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
                    R    +  + +T   G          ++D+  + G ++ A+ +  N+P + 
Sbjct: 511 -------LDRGT--EYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQP 561

Query: 302 SVVSWNVMIAG---YGQKYQSTKAIELLQRMK 330
              SW  ++     +G      KA E++ +M+
Sbjct: 562 GAASWGALLGASRIHGNTELGEKAAEMVFKME 593



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 17/92 (18%)

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           ++GL+D G E F  M  ++ V P   HYTCMID LGR     E                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
             LL + R+H N  L ++AA+  F++ P+NS 
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQNSG 850


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 184/508 (36%), Positives = 280/508 (55%), Gaps = 37/508 (7%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+++  YAK      A  +F  +PE  +VS+N +I+ Y    ++  A+ L   M+  G +
Sbjct: 78  NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137

Query: 336 PDEVTSINMLVACV---------------------------------RSGDIKTGREMFD 362
            D  T   ++ AC                                  ++GD+   + +F 
Sbjct: 138 MDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFY 197

Query: 363 SMPS-PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
            M       SWN+M+ +Y Q +   +A+ LF+EM  RG+  D  TLA +L++   +  L 
Sbjct: 198 GMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLS 257

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN-ELAERVFHRIPELDIVCWNSMIAGL 480
            G Q H   +KT  H +++V SGLI +YSKC        +VF  I E D+V WN+M++G 
Sbjct: 258 GGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGY 317

Query: 481 SLNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA-QIEKDGYVN 538
           S N   +E A   F+QM+     P   SF  V+S+C+ LSS  QG+Q+H+  ++ D   N
Sbjct: 318 SQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSN 377

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
            I V +ALI MY KCG++  AR+ FD M   NTV+ N MI GYAQ+G   E++ L++ M+
Sbjct: 378 RISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWML 437

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
              + P  ITF+++L+AC+H+G V+ G   FN M+    +EP  +HY+CMID LGRAG  
Sbjct: 438 ERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKL 497

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
            EAE LI  MP     + W  LL +CR H N+ LA +AA ++ +L+P N+APY +L+N+Y
Sbjct: 498 SEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMY 557

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +S GRW+++  VR+ M +  + K P  S
Sbjct: 558 ASAGRWEEVATVRKFMRDRGVKKKPGCS 585



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 159/586 (27%), Positives = 261/586 (44%), Gaps = 132/586 (22%)

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           + K   A  D+  G+  H L IK  +  + Y +N  + LY+KCG    A   F+++S+PN
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 186 EVTFTAMMSGLAKTDR-------------------------------VVEALEMFRLMIR 214
             +F A+++  AK  R                                  AL +F  M  
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
             + +D  +LS+V+  C         DV           + G Q+H + +  GF++ + +
Sbjct: 134 MGLDMDGFTLSAVITACC-------DDV----------GLIG-QLHSVAVSSGFDSYVSV 175

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           +N+LL  Y KNGD+D A+ +F  +   R  VSWN MI  YGQ  + +KA+ L Q M   G
Sbjct: 176 NNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRG 235

Query: 334 FEPDEVTSINMLVA--CVR--SGD-------IKTG------------------------- 357
              D  T  ++L A  C+   SG        IKTG                         
Sbjct: 236 LNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDC 295

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKE-AIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           R++F+ +  P +  WN M+S YSQ+E   E A++ FR+MQ  G +P+  +   ++S+C+ 
Sbjct: 296 RKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSN 355

Query: 417 MGILESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
           +     GKQ+H+ +LK+    +   V + LI +YSKC   + A R+F R+ E + V  NS
Sbjct: 356 LSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNS 415

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MIAG + + +++E+   F+ M + ++ PT  +F +VLS+CA           H    ++G
Sbjct: 416 MIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACA-----------HTGRVEEG 464

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT-----WNEMIHGYAQNGYGDEA 590
           +                         +F+MM  K  +      ++ MI    + G   EA
Sbjct: 465 W------------------------NYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEA 500

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS-MQLD 635
             L   M      P  I + ++L AC   G +++ V+  N  +QL+
Sbjct: 501 ENLIARM---PFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLE 543



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 217/458 (47%), Gaps = 61/458 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH+  +++ +   T+  N  I LYSKC     A+  F  +   +++S+NAI++A  K
Sbjct: 27  GKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAK 86

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                 A++LFD++PE ++VS+N LISA    G    AL +++ M   G      TL++V
Sbjct: 87  ESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAV 146

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
             A     DV    + H + +  G D  + V NALL+ Y K G    A  VF  M    +
Sbjct: 147 ITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRD 204

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG--VCAREGCGVESDVF 243
           EV++ +M+    +     +AL +F+ M+R+ +++D  +L+SVL    C  +  G      
Sbjct: 205 EVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSG------ 258

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK-NGDMDSAEVIFSNLPERS 302
                       G Q H   IK GF  + H+ + L+D+Y+K  G M     +F  + E  
Sbjct: 259 ------------GLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPD 306

Query: 303 VVSWNVMIAGYGQKYQSTK-AIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
           +V WN M++GY Q  +  + A+E  ++M+  G+ P++ + + ++ AC             
Sbjct: 307 LVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIH 366

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G+++  R +FD M   +  S N+M++ Y+Q    
Sbjct: 367 SLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIE 426

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            E++ LF+ M  R + P   T   +LS+CA  G +E G
Sbjct: 427 MESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG 464



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 202/420 (48%), Gaps = 48/420 (11%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ +H L IK       + SN  + +Y+K G +  A   F ++ + +V S+N +IA Y +
Sbjct: 27  GKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAK 86

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
           + +   A                                    ++FD +P P + S+N +
Sbjct: 87  ESRPLIA-----------------------------------HQLFDQIPEPDLVSYNTL 111

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTL-AIILSSCAAMGILESGKQVHAASLKTA 434
           +S+Y+       A+ LF  M+  G+  D  TL A+I + C  +G++    Q+H  S+  +
Sbjct: 112 ISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLI---GQLH--SVAVS 166

Query: 435 SHIDNYVA--SGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFM 491
           S  D+YV+  + L+  Y K    + A+RVF+ +  + D V WNSMI     +    +A  
Sbjct: 167 SGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALG 226

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            F++M +  +    F+ A+VL++   L     G Q H Q+ K G+  +  VGS LI++Y 
Sbjct: 227 LFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYS 286

Query: 552 KC-GDIYGARQFFDMMHGKNTVTWNEMIHGYAQN-GYGDEAVRLYKDMIASGVKPDDITF 609
           KC G +   R+ F+ +   + V WN M+ GY+QN  + ++A+  ++ M   G +P+D +F
Sbjct: 287 KCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSF 346

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEP-ILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           V +++ACS+      G +I +S+ L   +    +     +I    + G+  +A  L D M
Sbjct: 347 VCVISACSNLSSPSQGKQI-HSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM 405



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 159/362 (43%), Gaps = 54/362 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G   H  +++ G   ++ + + LI+LYSKC    S                       C
Sbjct: 258 GGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMS----------------------DC 295

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNG-LEEKALSVYNKMSNEGFVPTHITLA 124
           +        K+F+E+ E ++V WN ++S   +N    E AL  + +M   G+ P   +  
Sbjct: 296 R--------KVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFV 347

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            V  A + L     G++ H L +K  +  N I V NAL+++Y+KCG  + A  +F+ M+E
Sbjct: 348 CVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE 407

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DV 242
            N V+  +M++G A+    +E+L +F+ M+ + ++  S++  SVL  CA  G   E  + 
Sbjct: 408 HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNY 467

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
           F     KF+     +   C                ++D+  + G +  AE + + +P   
Sbjct: 468 FNMMKEKFNIEPEAEHYSC----------------MIDLLGRAGKLSEAENLIARMPFNP 511

Query: 302 SVVSWNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
             + W  ++     +G    + KA   + +++     P  V S NM  +  R  ++ T R
Sbjct: 512 GSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLS-NMYASAGRWEEVATVR 570

Query: 359 EM 360
           + 
Sbjct: 571 KF 572



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 140/316 (44%), Gaps = 57/316 (18%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC----------------- 452
           +L +C A   L +GK +H+  +K+      Y ++  I +YSKC                 
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 453 --------------QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
                          R  +A ++F +IPE D+V +N++I+  +       A   F  MR+
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
             +    F+ + V+++C        G Q+H+     G+ + + V +AL+  Y K GD+  
Sbjct: 134 MGLDMDGFTLSAVITACCD-DVGLIG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191

Query: 559 ARQFFDMMHG-KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
           A++ F  M G ++ V+WN MI  Y Q+  G +A+ L+++M+  G+  D  T  ++LTA +
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251

Query: 618 -----------HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
                      H  L+  G       Q  H    ++D Y+    C    G   +   + +
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFH-----QNSHVGSGLIDLYS---KC---GGGMSDCRKVFE 300

Query: 667 EMPCKDDPVIWEVLLS 682
           E+  + D V+W  ++S
Sbjct: 301 EIT-EPDLVLWNTMVS 315



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 88/236 (37%), Gaps = 36/236 (15%)

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
           N++  T   F  +L +C        G+ +H+   K       +  +  I +Y KCG +  
Sbjct: 2   NQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAW 61

Query: 559 AR-------------------------------QFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           AR                               Q FD +   + V++N +I  YA  G  
Sbjct: 62  ARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGET 121

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG-VEIFNSMQLDHGVEPILDHYT 646
             A+ L+  M   G+  D  T  A++TAC      DVG +   +S+ +  G +  +    
Sbjct: 122 APALGLFSGMREMGLDMDGFTLSAVITACCD----DVGLIGQLHSVAVSSGFDSYVSVNN 177

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
            ++   G+ G   +A+ +   M    D V W  ++ +   H     A    +E+ R
Sbjct: 178 ALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR 233


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 208/699 (29%), Positives = 336/699 (48%), Gaps = 106/699 (15%)

Query: 48  KMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSV 107
           ++   DI  WN  +S   ++   + A  +F+ MP R+ VS+N +IS  +RN     A ++
Sbjct: 43  RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102

Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
           +++M                                        +++++  N +L+ Y +
Sbjct: 103 FDQMP---------------------------------------ERDLFSWNVMLTGYVR 123

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
                 A  +F+ M E + V++ +++SG A+   V EA E+F  M  K    +S+S + +
Sbjct: 124 NCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGL 179

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           L      G   E+                    CL  +   + DL   N L+  + +   
Sbjct: 180 LAAYVHNGRIEEA--------------------CLLFESKSDWDLISWNCLMGGFVRKKK 219

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           +  A  +F  +P R  +SWN MI+GY Q    ++A  L     +     D  T   M+  
Sbjct: 220 LGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPT----RDVFTWTAMVSG 275

Query: 348 CVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
            V++G +   +  FD MP  +  S+NAM++ Y Q++    A +LF  M  R +    T +
Sbjct: 276 YVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMI 335

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
                                               G IG  ++      A + F  +P+
Sbjct: 336 ---------------------------------TGYGQIGDIAQ------ARKFFDMMPQ 356

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            D V W ++IAG + +    EA   F +++Q+     + +F   LS+CA +++   G+Q+
Sbjct: 357 RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQI 416

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H Q  K GY    FVG+AL+ MY KCG I  A   F+ +  K+ V+WN M+ GYA++G+G
Sbjct: 417 HGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFG 476

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
            +A+ +++ M  +GVKPD+IT V +L+ACSH+GL+D G E F SM  D+GV P   HYTC
Sbjct: 477 RQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTC 536

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
           MID LGRAG   EA+ LI  MP +     W  LL + R+H N  L ++AAE +F+++P+N
Sbjct: 537 MIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQN 596

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           S  Y LL+N+Y++ GRW D   +R  M +  + K P YS
Sbjct: 597 SGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYS 635



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 270/573 (47%), Gaps = 47/573 (8%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           D    N+ I  + +  +  SA H+F+ MP +   S+NA++S   ++     A  LFD+MP
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
           ER++ SWN +++  VRN     A  +++ M  +  V  +  L+   +       V+  R 
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGY----VDEARE 163

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
               V     +KN    N LL+ Y   G  + A  +FE  S+ + +++  +M G  +  +
Sbjct: 164 ----VFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKK 219

Query: 202 VVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
           + +A  +F ++ +R A+S +++    + G     G      +F +S  +           
Sbjct: 220 LGDARWLFDKMPVRDAISWNTM----ISGYAQGGGLSQARRLFDESPTR----------- 264

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
                     D+    +++  Y +NG +D A+  F  +PE++ VS+N MIAGY Q  +  
Sbjct: 265 ----------DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMD 314

Query: 321 KAIELLQRMKSCGFEPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
            A EL + M         ++S N M+    + GDI   R+ FD MP     SW A+++ Y
Sbjct: 315 IARELFESMPC-----RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGY 369

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           +QS +++EA+ +F E++  G   +R T    LS+CA +  LE GKQ+H  ++K       
Sbjct: 370 AQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGC 429

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           +V + L+ +Y KC   + A   F  I E D+V WN+M+AG + +    +A   F+ M+  
Sbjct: 430 FVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTA 489

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYG 558
            + P + +   VLS+C+      +G +    + KD G +      + +I++  + G +  
Sbjct: 490 GVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEE 549

Query: 559 ARQFF-DMMHGKNTVTWNEM-----IHGYAQNG 585
           A+    +M       +W  +     IHG  + G
Sbjct: 550 AQDLIRNMPFQPGAASWGALLGASRIHGNTELG 582



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 225/503 (44%), Gaps = 83/503 (16%)

Query: 3   AHVAGKLLHAHI-LRNGLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYS 56
           A ++G L ++   L   LFD     D F  N ++  Y +      A+ LFD MP KD+ S
Sbjct: 85  AMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVS 144

Query: 57  WNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
           WN++LS   ++  ++ A ++FD MPE+N +SWN L++A V NG  E+A  ++   S+   
Sbjct: 145 WNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL 204

Query: 117 VPTHITLASVFKA-----STALLD-------VEHGRRCHGLVIKIGLD-----------K 153
           +  +  +    +      +  L D       +       G     GL            +
Sbjct: 205 ISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR 264

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
           +++   A++S Y + G    A   F+EM E NEV++ AM++G  +T ++  A E+F  M 
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMP 324

Query: 214 RKAVSI---------------------------DSVSLSSVLGVCAREGCGVES-DVFA- 244
            + +S                            D VS ++++   A+ G   E+ ++F  
Sbjct: 325 CRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE 384

Query: 245 --QSDNKFSRNVH---------------GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
             Q     +R                  G+Q+H   +K+G+     + N+LL MY K G 
Sbjct: 385 IKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGS 444

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           +D A   F  + E+ VVSWN M+AGY +     +A+ + + MK+ G +PDE+T + +L A
Sbjct: 445 IDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSA 504

Query: 348 CVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
           C  +G +  G E F SM       P+   +  M+    ++   +EA  L R M F   +P
Sbjct: 505 CSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF---QP 561

Query: 403 DRTTLAIILSSCAAMGILESGKQ 425
              +   +L +    G  E G++
Sbjct: 562 GAASWGALLGASRIHGNTELGEK 584



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 153/332 (46%), Gaps = 31/332 (9%)

Query: 15  LRNGLFDD--TFL----------CNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           ++NG+ D+  TF            N +I  Y +      A+ LF+ MP ++I SWN +++
Sbjct: 277 VQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMIT 336

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              +  D+  A K FD MP+R+ VSW  +I+   ++G  E+AL+++ ++  +G      T
Sbjct: 337 GYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRAT 396

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
                     +  +E G++ HG  +K+G     +V NALL++Y KCG    A   FE + 
Sbjct: 397 FGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIE 456

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           E + V++  M++G A+     +AL +F  M    V  D +++  VL  C+  G       
Sbjct: 457 EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGL------ 510

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
                    R    +  + +T   G          ++D+  + G ++ A+ +  N+P + 
Sbjct: 511 -------LDRGT--EYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQP 561

Query: 302 SVVSWNVMIAG---YGQKYQSTKAIELLQRMK 330
              SW  ++     +G      KA E++ +M+
Sbjct: 562 GAASWGALLGASRIHGNTELGEKAAEMVFKME 593


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 190/610 (31%), Positives = 321/610 (52%), Gaps = 55/610 (9%)

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM-SEPNEVTFTAMMSGL 196
             ++ H  +++  L  +  + + +LS+Y+       ++ +F  + S P  + + +++   
Sbjct: 23  QAKQLHAQILRTSL-PSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCY 81

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
                 + +L  F  M+      D     SVL  C               D +F  +VHG
Sbjct: 82  TSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCT-----------LMKDLRFGESVHG 130

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
               C+ I+LG   DL+  N+L++MY+K          F +L E         +  Y + 
Sbjct: 131 ----CI-IRLGMGFDLYTCNALMNMYSK----------FWSLEE---------VNTYKKV 166

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
           +   K  ++  + +                    S  + + R++F+ MP   + SWN ++
Sbjct: 167 FDEGKTSDVYSKKEK------------------ESYYLGSLRKVFEMMPKRDIVSWNTVI 208

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           S  +Q+  H++A+ + REM    ++PD  TL+ +L   A    L  GK++H  +++    
Sbjct: 209 SGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYD 268

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D ++ S LI +Y+KC R + + RVF+ +P+ D + WNS+IAG   N +  E   FF+QM
Sbjct: 269 ADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQM 328

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
              ++ P   SF++++ +CA L++   G+Q+H  I +  +  ++F+ SAL++MY KCG+I
Sbjct: 329 LIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNI 388

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             AR  FD M   + V+W  MI GYA +G+  +A+ L+K M   GVKP+ + F+A+LTAC
Sbjct: 389 RTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTAC 448

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH+GLVD   + FNSM  D+ + P L+HY  + D LGR G   EA   I +M  +    +
Sbjct: 449 SHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSV 508

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W  LL++CR+H N+ LA++ +++LF +DP+N   Y LL+NIYS+ GRW D R +R  M +
Sbjct: 509 WSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRD 568

Query: 737 NCIVKDPAYS 746
             + K PA S
Sbjct: 569 KGMKKKPACS 578



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 230/465 (49%), Gaps = 37/465 (7%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSK---CNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           G+ +H  I+R G+  D + CN L+ +YSK       ++ + +FD+    D+YS       
Sbjct: 125 GESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYS-----KK 179

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
           + +S  L    K+F+ MP+R++VSWN +IS   +NG+ E AL +  +M N    P   TL
Sbjct: 180 EKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTL 239

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +SV       +++  G+  HG  I+ G D ++++ ++L+ +YAKC     +  VF  + +
Sbjct: 240 SSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQ 299

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + +++ ++++G  +     E L+ F+ M+   +  + VS SS++  CA           
Sbjct: 300 HDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAH---------- 349

Query: 244 AQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                     +H G+Q+H   I+  F+ ++ ++++L+DMYAK G++ +A  IF  +    
Sbjct: 350 -------LTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYD 402

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           +VSW  MI GY     +  AI L +RM+  G +P+ V  + +L AC  +G +    + F+
Sbjct: 403 MVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFN 462

Query: 363 SMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           SM       P +  + A+     +    +EA +   +M    ++P  +  + +L++C   
Sbjct: 463 SMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH---IEPTGSVWSTLLAACRVH 519

Query: 418 GILESGKQVHAASLKT-ASHIDNYVASGLIGIYSKCQRNELAERV 461
             +E  ++V          +I  YV   L  IYS   R + A ++
Sbjct: 520 KNIELAEKVSKKLFTVDPQNIGAYVL--LSNIYSAAGRWKDARKL 562



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 212/485 (43%), Gaps = 113/485 (23%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+    K LHA ILR  L   + L + ++ +YS  N  H +  +F+ +P           
Sbjct: 19  KSKSQAKQLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSLLIFNSLPSPP-------- 69

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                   ++W ++I     +GL   +LS + +M   G  P H 
Sbjct: 70  ----------------------TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHN 107

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV------ 175
              SV K+ T + D+  G   HG +I++G+  ++Y  NAL+++Y+K  W+   V      
Sbjct: 108 VFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKF-WSLEEVNTYKKV 166

Query: 176 ------------------------PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
                                    VFE M + + V++  ++SG A+     +AL M R 
Sbjct: 167 FDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVRE 226

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M    +  DS +LSSVL             +FA+  N       G+++H   I+ G++AD
Sbjct: 227 MGNADLRPDSFTLSSVL------------PIFAEYVNLLK----GKEIHGYAIRNGYDAD 270

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + + +SL+DMYAK   +D +  +F  LP+   +SWN +IAG  Q     + ++  Q+M  
Sbjct: 271 VFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLI 330

Query: 332 CGFEPDEVTSINMLVAC----------------VRS-------------------GDIKT 356
              +P+ V+  +++ AC                +RS                   G+I+T
Sbjct: 331 AKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRT 390

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R +FD M    + SW AM+  Y+   +  +AI LF+ M+  GVKP+      +L++C+ 
Sbjct: 391 ARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSH 450

Query: 417 MGILE 421
            G+++
Sbjct: 451 AGLVD 455



 Score = 45.8 bits (107), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           M  TQ    T+L + + + S  Q +Q+HAQI +    +   + S ++ +Y     ++ + 
Sbjct: 1   MNTTQNLCKTLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSL 59

Query: 561 QFFDMMHG-KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
             F+ +     T+ W  +I  Y  +G    ++  +  M+ASG  PD   F ++L +C+
Sbjct: 60  LIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCT 117


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 228/718 (31%), Positives = 362/718 (50%), Gaps = 66/718 (9%)

Query: 73  AYKLFDEMPERNVV--SWNNLISALVRNGLEEK----ALSVYNKMSNEGFVPTHITLASV 126
           A +  D MP R+    S +N + A+V  G   K    AL  +  +   G V     ++ V
Sbjct: 48  ARQALDGMPSRDAAAGSSSNPV-AIVDYGRRGKGRGEALDHFVDVHRCGRV-QGAAVSRV 105

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDK-NIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
            K    + D   G + H L +K G D+  + V  AL+ +Y KCG  +    VFE M + N
Sbjct: 106 LKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRN 165

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+T++++G  +     + + +F  M  + V  +  + +SVL   A +G     D+   
Sbjct: 166 VVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQG---AVDL--- 219

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G++VH  ++K G  + + + NSL++MY+K G ++ A+ +F  +  R +VS
Sbjct: 220 ----------GRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVS 269

Query: 306 WNVMIAGY--------------------GQKYQST-----------KAIELLQRMKSC-- 332
           WN ++AG                      +  QST           K + L +++ SC  
Sbjct: 270 WNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVL 329

Query: 333 --GFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSENHKEAI 389
             GF  D      ++ A  + G++     +F  MP S +V SW AM+    Q+ +   A 
Sbjct: 330 KHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAA 389

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF  M+   VKP+  T + +L+  A++ IL    Q+HA  +KT       V + L+  Y
Sbjct: 390 ALFSRMREDNVKPNEFTYSTVLT--ASIPILL--PQIHAQIIKTNYQHAPSVGTALLASY 445

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           SK    E A  +F  I   D+V W++M++  S       A   F +M    M P +F+ +
Sbjct: 446 SKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTIS 505

Query: 510 TVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           + + +CA  ++   QGRQ HA   K  Y + I VGSAL+ MY + G I  AR  F+    
Sbjct: 506 SAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTD 565

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           ++ V+WN MI GYAQ+GY  EA+  ++ M   G++ D  TF+A++  C+H+GLV  G + 
Sbjct: 566 RDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQY 625

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F+SM +DH + P ++HY+CM+D   RAG   E   LI+ MP     ++W  LL +CR+H 
Sbjct: 626 FDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHK 685

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           NV L K AA++L  L+P +SA Y LL+NIY++ GRW +   VR+LM    + K+   S
Sbjct: 686 NVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCS 743



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 273/591 (46%), Gaps = 65/591 (10%)

Query: 4   HVAGKLLHAHILR----NGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           H  G++  A + R     GL  D     +L  L  KC         FD+    ++    A
Sbjct: 92  HRCGRVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCG--------FDR---AEVGVGTA 140

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           ++    K   +E    +F+ MP+RNVV+W +L++  V+       ++++ +M  EG  P 
Sbjct: 141 LVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPN 200

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             T  SV  A  +   V+ GRR H   +K G    ++V N+L+++Y+KCG  + A  VF 
Sbjct: 201 PFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFR 260

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           +M   + V++  +M+GL   +  +EAL++F         +   + S+V+ +CA       
Sbjct: 261 QMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCA------- 313

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                       +    +Q+H   +K GF +D ++  +++D Y+K G++D A  IF  +P
Sbjct: 314 ---------NLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMP 364

Query: 300 -ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT-------SINMLVACVRS 351
             ++VVSW  MI G  Q      A  L  RM+    +P+E T       SI +L+  + +
Sbjct: 365 GSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHA 424

Query: 352 GDIKTGRE------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
             IKT  +                        +F  +    V +W+AMLS YSQ+ +   
Sbjct: 425 QIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDG 484

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAA-MGILESGKQVHAASLKTASHIDNYVASGLI 446
           A  +F +M  +G+KP+  T++  + +CA+    ++ G+Q HA S+K        V S L+
Sbjct: 485 ATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALV 544

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y++    + A  VF R  + D+V WNSMI+G + +    EA   F+QM    +     
Sbjct: 545 TMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGA 604

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDI 556
           +F  V+  C       +G+Q    +  D  ++      S ++++Y + G +
Sbjct: 605 TFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKL 655


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 193/647 (29%), Positives = 339/647 (52%), Gaps = 46/647 (7%)

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIG----LDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           A   +   A  D   GR  HG V++ G    LD  ++ AN LL++Y K G    A  +F+
Sbjct: 63  ARQLQGCIARGDARGGRAVHGHVVRRGGVGRLD--LFCANVLLNMYGKLGPLASARRLFD 120

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC-AREGCGV 238
            M E N V+F  ++   A+      A  +FR +  +   ++   L+++L +  A +  G+
Sbjct: 121 RMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGL 180

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
              V                 H    KLG + +  + + L+D Y+    +  AE +F+ +
Sbjct: 181 AGGV-----------------HSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGI 223

Query: 299 PERSVVSWNVMIAGYGQK------YQSTKAIELL------QRMKSCGFEPDEVTS----- 341
             +  V W  M++ Y +       ++  ++  LL      Q +  C  +    T      
Sbjct: 224 VRKDAVVWTAMVSCYSENDCPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGG 283

Query: 342 --INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
             ++M   C   GDIK  R  F+ +P   V   + M+S Y+QS  +++A +LF  +    
Sbjct: 284 ALLDMYAKC---GDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 340

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V P+  +L+ +L +C  M  L+ GKQ+H  ++K     D +V + L+  Y+KC   + + 
Sbjct: 341 VLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSL 400

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           ++F  + + + V WN+++ G S + L  EA   F +M+  +M  TQ ++++VL +CA  +
Sbjct: 401 KIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTA 460

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S     Q+H  IEK  + ND  +G++LI+ Y KCG I  A + F  +  ++ ++WN +I 
Sbjct: 461 SIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIIS 520

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GYA +G   +A+ L+  M  S V+ +DITFVA+L+ C  +GLV+ G+ +F+SM++DHG++
Sbjct: 521 GYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIK 580

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P ++HYTC++  LGRAG  ++A   I ++P     ++W  LLSSC +H NV L + +AE+
Sbjct: 581 PSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEK 640

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +  ++P++   Y LL+N+Y++ G  D +  +R+ M    + K P  S
Sbjct: 641 ILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLS 687



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 142/563 (25%), Positives = 247/563 (43%), Gaps = 72/563 (12%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D++  N +L+   K   L  A +LFD MPERN+VS+  L+ A  + G  E A +++ ++ 
Sbjct: 95  DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            EG       L ++ K + A+         H    K+G D N +V + L+  Y+ C    
Sbjct: 155 WEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVS 214

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF  +   + V +TAM+S  ++ D    A        R A S   +++S     CA
Sbjct: 215 DAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAF-------RCAQSCSLLAIS-----CA 262

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
           R+G                       +H   IK   + + H+  +LLDMYAK GD+  A 
Sbjct: 263 RQG-----------------------IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDAR 299

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---- 348
           + F  +P   V+  + MI+ Y Q  Q+ +A EL  R+      P+E +  ++L AC    
Sbjct: 300 LAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMV 359

Query: 349 -------VRSGDIKTGRE------------------------MFDSMPSPSVSSWNAMLS 377
                  + +  IK G E                        +F S+   +  SWN ++ 
Sbjct: 360 QLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVV 419

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            +SQS   +EA+ +F EMQ   +   + T + +L +CA+   +    Q+H +  K+  + 
Sbjct: 420 GFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNN 479

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D  + + LI  Y+KC     A +VF  + E DI+ WN++I+G +L+    +A   F +M 
Sbjct: 480 DTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMN 539

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDI 556
           ++ +     +F  +LS C        G  +   +  D G    +   + ++ +  + G +
Sbjct: 540 KSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRL 599

Query: 557 YGARQFF-DMMHGKNTVTWNEMI 578
             A QF  D+    + + W  ++
Sbjct: 600 NDALQFIGDIPSAPSAMVWRALL 622



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 237/548 (43%), Gaps = 98/548 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           A KL H H        + F+ + LI+ YS C+    A+H+F+ +  KD   W A++S   
Sbjct: 188 AWKLGHDH--------NAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYS 239

Query: 66  KSDDLEFAYKL------------------------------------------------- 76
           ++D  E A++                                                  
Sbjct: 240 ENDCPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDAR 299

Query: 77  --FDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALL 134
             F+ +P  +V+  + +IS   ++   E+A  ++ ++     +P   +L+SV +A T ++
Sbjct: 300 LAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMV 359

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
            ++ G++ H   IKIG + +++V NAL+  YAKC     ++ +F  + + NEV++  ++ 
Sbjct: 360 QLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVV 419

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G +++    EAL +F  M    +    V+ SSVL  CA                  +   
Sbjct: 420 GFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAST----------------ASIR 463

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           H  Q+HC   K  F  D  + NSL+D YAK G +  A  +F +L ER ++SWN +I+GY 
Sbjct: 464 HAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 523

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSV 369
              Q+  A+EL  RM     E +++T + +L  C  +G +  G  +FDSM       PS+
Sbjct: 524 LHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSM 583

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC-----AAMGILESGK 424
             +  ++    ++    +A++   ++      P       +LSSC      A+G   + K
Sbjct: 584 EHYTCIVRLLGRAGRLNDALQFIGDIP---SAPSAMVWRALLSSCIIHKNVALGRFSAEK 640

Query: 425 QVHAASLKTASHI---DNYVASG---LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            +        +++   + Y A+G    + +  K  RN    +V    P L  V     I 
Sbjct: 641 ILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKV----PGLSWVEIKGEIH 696

Query: 479 GLSLNSLD 486
             S+ S+D
Sbjct: 697 AFSVGSVD 704



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 215/509 (42%), Gaps = 110/509 (21%)

Query: 6   AGKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            G+ +H H++R G     D F  N L+ +Y K     SA+ LFD+MP +++ S+  ++ A
Sbjct: 77  GGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQA 136

Query: 64  QCKSDDLEFAYKLFDEMP---------------------------------------ERN 84
             +  D E A  LF  +                                        + N
Sbjct: 137 HAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHN 196

Query: 85  VVSWNNLISAL-----------VRNGLEEKALSVYNKMS---NEGFVPTHITLASVFKAS 130
               + LI A            V NG+  K   V+  M    +E   P +   A     S
Sbjct: 197 AFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPEN---AFRCAQS 253

Query: 131 TALLDVEHGRR-CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            +LL +   R+  HG  IK   D   +V  ALL +YAKCG  K A   FE +   + +  
Sbjct: 254 CSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILL 313

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           + M+S  A++++  +A E+F  ++R +V  +  SLSSVL  C             Q D  
Sbjct: 314 SFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTN---------MVQLD-- 362

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+Q+H   IK+G E+DL + N+L+D YAK  DMDS+  IFS+L + + VSWN +
Sbjct: 363 -----FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTI 417

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------- 348
           + G+ Q     +A+ +   M++      +VT  ++L AC                     
Sbjct: 418 VVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTF 477

Query: 349 --------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + G I+   ++F  +    + SWNA++S Y+      +A++LF  
Sbjct: 478 NNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDR 537

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M    V+ +  T   +LS C + G++  G
Sbjct: 538 MNKSNVESNDITFVALLSVCCSTGLVNHG 566


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 199/617 (32%), Positives = 329/617 (53%), Gaps = 47/617 (7%)

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           L+  +  +N  ++ + + G    A  +F  M   +  T+ AM++G +   R+  A  +FR
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 211 LMIRKAVSIDSVSLSSVLGVCA-----REGCGVESDVFAQSDNKFSRNVHGQQVHCLT-- 263
            + R     D+ S +++L   A      +  G+  ++  +    ++  +     H L   
Sbjct: 94  AIPRP----DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149

Query: 264 ----IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
                 L  E D    N +L  Y +NG ++ A  +F++  E  V+SWN +++GY Q  + 
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
           ++A EL  RM        +V S N++V+   R GD+   R +FD+ P   V +W A++S 
Sbjct: 210 SEARELFDRMPG-----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSG 264

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLA--IILSSCAAMGILESGKQV-------HAA 429
           Y+Q+   +EA ++F  M      P+R  ++   ++++     +++  K++       + A
Sbjct: 265 YAQNGMLEEARRVFDAM------PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA 318

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
           S  T   +  Y  +G++         E A+ VF  +P+ D V W +M+A  S      E 
Sbjct: 319 SWNTM--LTGYAQAGML---------EEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
              F +M +   +  + +FA VLS+CA +++   G Q+H ++ + GY    FVG+AL+ M
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y KCG++  AR  F+ M  ++ V+WN MI GYA++G+G EA+ ++  M  +  KPDDIT 
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           V +L ACSHSGLV+ G+  F SM  D GV    +HYTCMID LGRAG   EA  L+ +MP
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547

Query: 670 CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRA 729
            + D  +W  LL + R+H N  L + AAE++F L+P+N+  Y LL+NIY+S G+W D R 
Sbjct: 548 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARK 607

Query: 730 VRELMSENCIVKDPAYS 746
           +R +M E  + K P +S
Sbjct: 608 MRVMMEERGVKKVPGFS 624



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 233/497 (46%), Gaps = 50/497 (10%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N+ I  + +      A+ LF  MP +   ++NA+L+    +  L  A  LF  +P  +  
Sbjct: 42  NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNY 101

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S+N L+ AL  +     A  ++++M     V  ++ ++S            H    HGLV
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS------------HAN--HGLV 147

Query: 147 ------IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
                   +  +K+    N +L+ Y + G  + A  +F   +E + +++ A+MSG  +  
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWG 207

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
           ++ EA E+F  M  +    D VS + ++   AR G  VE+           R      V 
Sbjct: 208 KMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEA----------RRLFDAAPVR 253

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
                     D+    +++  YA+NG ++ A  +F  +PER+ VSWN M+A Y Q+    
Sbjct: 254 ----------DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMD 303

Query: 321 KAIELLQRMKSCGFEPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
           +A EL   M  C      V S N ML    ++G ++  + +FD+MP     SW AML++Y
Sbjct: 304 EAKELFN-MMPC----RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAY 358

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           SQ    +E ++LF EM   G   +R+  A +LS+CA +  LE G Q+H   ++    +  
Sbjct: 359 SQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGC 418

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           +V + L+ +Y KC   E A   F  + E D+V WN+MIAG + +    EA   F  MR  
Sbjct: 419 FVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTT 478

Query: 500 EMYPTQFSFATVLSSCA 516
              P   +   VL++C+
Sbjct: 479 STKPDDITLVGVLAACS 495



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 195/406 (48%), Gaps = 37/406 (9%)

Query: 18  GLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEF 72
           GLF+     D    N L+  Y +      A+ LFD+MP +D+ SWN ++S   +  D+  
Sbjct: 183 GLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVE 242

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A +LFD  P R+V +W  ++S   +NG+ E+A  V++ M     V  +  +A+  +    
Sbjct: 243 ARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRR-- 300

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           ++D          +  +   +N+   N +L+ YA+ G  + A  VF+ M + + V++ AM
Sbjct: 301 MMDEAKE------LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAM 354

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           ++  ++     E L++F  M R    ++  + + VL  CA        D+ A        
Sbjct: 355 LAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCA--------DIAALE------ 400

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G Q+H   I+ G+     + N+LL MY K G+M+ A   F  + ER VVSWN MIAG
Sbjct: 401 --CGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAG 458

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SP 367
           Y +     +A+E+   M++   +PD++T + +L AC  SG ++ G   F SM      + 
Sbjct: 459 YARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTA 518

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
               +  M+    ++    EA  L ++M F   +PD T    +L +
Sbjct: 519 KPEHYTCMIDLLGRAGRLAEAHDLMKDMPF---EPDSTMWGALLGA 561



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 7/123 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH  ++R G     F+ N L+ +Y KC N   A++ F++M  +D+ SWN +++   +
Sbjct: 402 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR 461

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFV---PT 119
               + A ++FD M   +     ++   +++A   +GL EK +S +  M ++  V   P 
Sbjct: 462 HGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPE 521

Query: 120 HIT 122
           H T
Sbjct: 522 HYT 524


>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 752

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 195/648 (30%), Positives = 329/648 (50%), Gaps = 53/648 (8%)

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           + K S    D   G+  H  ++K G   + +  N +L+LY K      A  VF+ M   N
Sbjct: 73  LIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRN 132

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +T+T+++ G  + +    A  +   M +   + +  + + +L  C+             
Sbjct: 133 TITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACS------------S 180

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D++    + G+Q+HC  IK GF+ ++ +  SL+ MY K+G  D AE +F ++  + +  
Sbjct: 181 PDDR----ILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRC 236

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
            N MI  YG+     KAIE+ + + + GFEP + T  N++  C                 
Sbjct: 237 LNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAF 296

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                               SG  K    MF SM   ++ SW A++S YS+S   K+A+ 
Sbjct: 297 KYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVD 356

Query: 391 LFREMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            F  +    G+  D T L  IL  C+    LE G Q+H   +K     D  VA+ L+ +Y
Sbjct: 357 AFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLY 416

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQFSF 508
           +KC++ + A  VF  +    I  +N+++AG   +S D E   + F Q+R   + P   +F
Sbjct: 417 AKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTF 476

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           + +LS  A  +S  +GR  HA   K G+  +I V +++I MY KCG I  A Q F++M+ 
Sbjct: 477 SRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNC 536

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           +++++WN +I  YA +G   +++ L+++M   G  PD+ T +AIL AC++SGL   G+ +
Sbjct: 537 RDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICL 596

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           FN M+  +G++P+L+HY CM D LGRAG+  EA  +I   P     ++W  L++ C+LH 
Sbjct: 597 FNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHG 656

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           N+   K A++ L  L P  +  Y L++N+Y+S    D+   VR++M++
Sbjct: 657 NLNFGKLASKHLLDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMND 704



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/547 (23%), Positives = 253/547 (46%), Gaps = 84/547 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+++++ G  DDTF  N ++ LY K N                             
Sbjct: 86  GQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNR---------------------------- 117

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A K+FD M  RN ++W +LI   + +   + A S+   M   G      T   +
Sbjct: 118 ---LDLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVI 174

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A ++  D   G + H  VIK G D+N++V  +L+++Y K G+   A  VF+ M   + 
Sbjct: 175 LQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDI 234

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
                M+    +     +A+E+F+ ++         + ++++  C  +  GVE       
Sbjct: 235 RCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGD-LGVE------- 286

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+Q+  L  K GF ++  + N+++ MY  +G    AE +FS++ E++++SW
Sbjct: 287 --------EGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISW 338

Query: 307 NVMIAGYGQKYQSTKAIE----------------LLQRMKSCGFEPDEVT---------- 340
             +I+GY +     KA++                LL  +  C  + + +           
Sbjct: 339 TALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVM 398

Query: 341 ------SINMLVACV----RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE-AI 389
                  +N+  A V    +   +++ R +FD + +  ++S+NA+L+ + +S   +E  +
Sbjct: 399 KLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPM 458

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF +++  GVKPD  T + +LS  A    LE G+  HA ++KT    +  VA+ +I +Y
Sbjct: 459 ILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMY 518

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +KC   E A ++F+ +   D + WN++I+  +L+    ++   F++M++    P +F+  
Sbjct: 519 AKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTIL 578

Query: 510 TVLSSCA 516
            +L +C 
Sbjct: 579 AILQACT 585



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 205/458 (44%), Gaps = 86/458 (18%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            + G+ +H  ++++G  ++ F+   LI +Y+K                            
Sbjct: 184 RILGEQIHCFVIKSGFDENVFVGTSLIAMYTK---------------------------- 215

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
              S   + A K+FD M  +++   N +I    R G   KA+ V+  + N+GF PT  T 
Sbjct: 216 ---SGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTF 272

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            ++       L VE G++  GL  K G      V NA++++Y   G  K A  +F  MSE
Sbjct: 273 TNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSE 332

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
            N +++TA++SG +++    +A++ F  L     ++ DS  L+++L  C+          
Sbjct: 333 KNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSD--------- 383

Query: 243 FAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                     N+  G Q+H   +KLG   D++++ +L+D+YAK   + SA ++F +L  +
Sbjct: 384 --------CNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNK 435

Query: 302 SVVSWNVMIAGYGQKYQSTK-AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-- 358
            + S+N ++AG+ +     +  + L  +++  G +PD VT   +L        ++ GR  
Sbjct: 436 GIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSF 495

Query: 359 ---------------------------------EMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                            +MF+ M      SWNA++S+Y+     
Sbjct: 496 HAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQA 555

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           ++++ LF EM+ +G  PD  T+  IL +C   G+ + G
Sbjct: 556 QKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDG 593



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 8/240 (3%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK----DIYS 56
           KKA  A   LH  +  N  FD T L   +++  S CNN      +   +       D+  
Sbjct: 352 KKAVDAFLGLHDELGIN--FDSTLL-TAILDCCSDCNNLELGLQIHGFVMKLGCACDVNV 408

Query: 57  WNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRN-GLEEKALSVYNKMSNEG 115
             A++    K + L+ A  +FD +  + + S+N +++  + + G EE  + ++N++   G
Sbjct: 409 ATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAG 468

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
             P  +T + +         +E GR  H   +K G D NI VAN+++S+YAKCG  + A 
Sbjct: 469 VKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAH 528

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            +F  M+  + +++ A++S  A   +  ++L +F  M RK    D  ++ ++L  C   G
Sbjct: 529 QMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSG 588


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 185/641 (28%), Positives = 321/641 (50%), Gaps = 82/641 (12%)

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           + H  ++K G   + Y++  L++ Y+       A  + + + +P   +F++++  L K  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              +++ +F  M    +  D+  L ++  VCA                + S    G+Q+H
Sbjct: 96  LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCA----------------ELSAFKAGKQIH 139

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
           C+    G + D  +  SL  MY + G M  A  +F  + E+ VV+ + ++ GY +K    
Sbjct: 140 CVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLE 199

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
           + + +L  M+  G EP+                               + SWN +LS ++
Sbjct: 200 EVVRILSEMEKSGIEPN-------------------------------IVSWNGILSGFN 228

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           +S  HKEA+ +F++M   G  PD+ T++ +L S      L  G+Q+H   +K     D  
Sbjct: 229 RSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKC 288

Query: 441 VASGLIGIYSKC----------------------------QRNELAERVFHRIP------ 466
           V S ++ +Y K                              RN L ++            
Sbjct: 289 VISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQK 348

Query: 467 -ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
            EL++V W S+IAG + N  DIEA   F++M+   + P + +  ++L +C  +++   GR
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGR 408

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
             H    +   ++D+ VGSALI+MY KCG I  ++  F+MM  KN V WN +++GY+ +G
Sbjct: 409 STHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHG 468

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
              E + +++ ++ + +KPD I+F ++L+AC   GL D G + FN M  ++G++P L+HY
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHY 528

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
           +CM++ LGRAG   EA  LI E+P + D  +W  LL+SCRL  NV LA+ AA++LF L+P
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEP 588

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +N   Y L++NIY++ G W ++ ++R  M    + K+P  S
Sbjct: 589 ENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 226/440 (51%), Gaps = 31/440 (7%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A  AGK +H     +GL  D F+   L  +Y +C     A+ +FD+M  KD+ + +A+L 
Sbjct: 131 AFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLC 190

Query: 63  AQCKSDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
              +   LE   ++  EM     E N+VSWN ++S   R+G  ++A+ ++ KM + GF P
Sbjct: 191 GYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCP 250

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
             +T++SV  +     ++  GR+ HG VIK GL K+  V +A+L +Y K G     + +F
Sbjct: 251 DQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLF 310

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           +E          A ++GL++   V +ALEMF L   + + ++ VS +S++  CA+ G  +
Sbjct: 311 DEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDI 370

Query: 239 ES-------DVFAQSDNKFS--------RNV----HGQQVHCLTIKLGFEADLHLSNSLL 279
           E+        V     N+ +         N+    HG+  H   +++    D+H+ ++L+
Sbjct: 371 EALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALI 430

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
           DMYAK G +  ++++F+ +P +++V WN ++ GY    ++ + + + + +     +PD +
Sbjct: 431 DMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFI 490

Query: 340 TSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           +  ++L AC + G    G + F+ M       P +  ++ M++   ++   +EA  L +E
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550

Query: 395 MQFRGVKPDRTTLAIILSSC 414
           + F   +PD      +L+SC
Sbjct: 551 IPF---EPDSCVWGALLNSC 567



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 130/571 (22%), Positives = 241/571 (42%), Gaps = 127/571 (22%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           HA IL++G  +D ++  +LI  YS  N  + A  +   +P   +YS+++           
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSS----------- 86

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
                               LI AL +  L  +++ V+++M + G +P    L ++FK  
Sbjct: 87  --------------------LIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVC 126

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
             L   + G++ H +    GLD + +V  +L  +Y +CG    A  VF+ MSE + VT +
Sbjct: 127 AELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCS 186

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           A++ G A+   + E + +   M +  +  + VS + +L    R G   E+ +  Q  +  
Sbjct: 187 ALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHL 246

Query: 251 ------------------SRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAK------- 284
                             S N++ G+Q+H   IK G   D  + +++LDMY K       
Sbjct: 247 GFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGI 306

Query: 285 ------------------------NGDMDSAEVIFSNLPER----SVVSWNVMIAGYGQK 316
                                   NG +D A  +F    E+    +VVSW  +IAG  Q 
Sbjct: 307 IKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQN 366

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------------------- 348
            +  +A+EL + M+  G +P+ VT  +ML AC                            
Sbjct: 367 GKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVG 426

Query: 349 -------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                   + G IK  + +F+ MP+ ++  WN++++ YS     KE + +F  +    +K
Sbjct: 427 SALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLK 486

Query: 402 PDRTTLAIILSSCAAMGILESGKQ---VHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           PD  +   +LS+C  +G+ + G +   + +        +++Y  S ++ +  +  + + A
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHY--SCMVNLLGRAGKLQEA 544

Query: 459 ERVFHRIP-ELDIVCWNSMIAGLSL-NSLDI 487
             +   IP E D   W +++    L N++D+
Sbjct: 545 YDLIKEIPFEPDSCVWGALLNSCRLQNNVDL 575



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 181/377 (48%), Gaps = 33/377 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H ++++ GL  D  + + ++++Y K  + +    LFD+    +    NA ++   +
Sbjct: 271 GRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSR 330

Query: 67  SDDLEFAYKLF----DEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
           +  ++ A ++F    ++  E NVVSW ++I+   +NG + +AL ++ +M   G  P  +T
Sbjct: 331 NGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVT 390

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + S+  A   +  + HGR  HG  +++ L  +++V +AL+ +YAKCG  K +  VF  M 
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMP 450

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-- 240
             N V + ++M+G +   +  E + +F  ++R  +  D +S +S+L  C + G   E   
Sbjct: 451 TKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510

Query: 241 ---------------DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
                          + ++   N   R    Q+ + L  ++ FE D  +  +LL+     
Sbjct: 511 YFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQ 570

Query: 286 GDMDSAEV----IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS 341
            ++D AE+    +F   PE    ++ +M   Y  K   T+   +  +M+S G + +   S
Sbjct: 571 NNVDLAEIAAQKLFHLEPENP-GTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629

Query: 342 -------INMLVACVRS 351
                  +  L+AC +S
Sbjct: 630 WIQVKNKVYTLLACDKS 646


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 211/684 (30%), Positives = 347/684 (50%), Gaps = 62/684 (9%)

Query: 104 ALSVYNKMSNEGFVPT-HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALL 162
           A+S  + M+ +G  P   +T +S+ K+         G+  H  +I+  ++ +  + N+L+
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLI 104

Query: 163 SLYAKCGWTKHAVPVFEEMS---EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           SLY+K G    A  VFE M    + + V+++AMM+      R  +A+++F   +   +  
Sbjct: 105 SLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVP 164

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSL 278
           +    ++V+  C+       SD              G+ +    +K G FE+D+ +  SL
Sbjct: 165 NDYCYTAVIRACS------NSDFVGV----------GRVILGFLMKTGHFESDVCVGCSL 208

Query: 279 LDMYAKN-GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           +DM+ K     ++A  +F  + E +VV+W +MI    Q     +AI     M   GFE D
Sbjct: 209 IDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268

Query: 338 ------------------------------------EVTSINMLVACVRSGDIKTGREMF 361
                                               E + ++M   C   G +   R++F
Sbjct: 269 KFTLSSVFSACAELENLSLGRQLHSWAIRSGLADDVECSLVDMYAKCSADGSVDDCRKVF 328

Query: 362 DSMPSPSVSSWNAMLSSYSQSEN-HKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGI 419
           D M   SV SW A+++ Y Q+ N   EAI LF EM  +G V+P+  T +    +C  +  
Sbjct: 329 DRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSD 388

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
              GKQV   + K     ++ V++ +I ++ KC R E A   F  + E ++V +N+ + G
Sbjct: 389 PRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDG 448

Query: 480 LSLNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
              N LD E AF    ++ + E+  + F+FA++LS  A + S  +G Q+H+Q+ K G   
Sbjct: 449 TCRN-LDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSC 507

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           +  V +ALI MY KCG I  A + F +M  +N ++W  MI G+A++G+ +  +  +  M 
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMT 567

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
             GVKP+++T+VAIL+ACSH GLV  G   FNSM  DH ++P ++HY CM+D L RAG  
Sbjct: 568 KEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLL 627

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
            +A   I+ MP + D ++W   L +CR+H+N  L K AA ++   DP   A Y  L+NIY
Sbjct: 628 TDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIY 687

Query: 719 SSLGRWDDLRAVRELMSENCIVKD 742
           +S G+W++   +R  M E  +VK+
Sbjct: 688 ASAGKWEESTEMRRKMKERNLVKE 711



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 265/603 (43%), Gaps = 89/603 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKL+HA ++   +  D+ L N LI LYSK  +   A+ +F+ M                 
Sbjct: 81  GKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETM----------------- 123

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                          +R+VVSW+ +++    NG E  A+ ++ +    G VP      +V
Sbjct: 124 -----------GRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAV 172

Query: 127 FKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWT-KHAVPVFEEMSEP 184
            +A +    V  GR   G ++K G  + ++ V  +L+ ++ K   + ++A  VF++MSE 
Sbjct: 173 IRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL 232

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N VT+T M++   +     EA+  F  M+      D  +LSSV   CA            
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA------------ 280

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIFSNLPER 301
               +      G+Q+H   I+ G   D+    SL+DMYAK   +G +D    +F  + + 
Sbjct: 281 ----ELENLSLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQDH 334

Query: 302 SVVSWNVMIAGYGQKYQ-STKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGRE 359
           SV+SW  +I GY Q    +T+AI L   M + G  EP+  T  +   AC    D + G++
Sbjct: 335 SVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQ 394

Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
           +                                   F+S+   ++ S+N  L    ++ +
Sbjct: 395 VLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLD 454

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            + A +L  E+  R +     T A +LS  A +G L  G+Q+H+  LK     +  V + 
Sbjct: 455 FEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNA 514

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI +YSKC   + A RVF  +   +++ W SMI G + +         F QM +  + P 
Sbjct: 515 LISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPN 574

Query: 505 QFSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
           + ++  +LS+C+ +    +G R  ++  E       +   + ++++ C+ G +  A +F 
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634

Query: 564 DMM 566
           + M
Sbjct: 635 NTM 637



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 200/425 (47%), Gaps = 56/425 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH+  +R+GL DD   C+ L+++Y+KC                         SA   
Sbjct: 288 GRQLHSWAIRSGLADDV-ECS-LVDMYAKC-------------------------SADGS 320

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRN-GLEEKALSVYNKMSNEGFV-PTHITLA 124
            DD     K+FD M + +V+SW  LI+  ++N  L  +A++++++M  +G V P H T +
Sbjct: 321 VDDCR---KVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFS 377

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S FKA   + D   G++  G   K GL  N  V+N+++S++ KC   + A   FE +SE 
Sbjct: 378 SAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEK 437

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++   + G  +      A E+   +  + + + + + +S+L   A  G         
Sbjct: 438 NLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVG--------- 488

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            S  K      G+Q+H   +KLG   +  + N+L+ MY+K G +D+A  +FS +  R+V+
Sbjct: 489 -SLRK------GEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVI 541

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SW  MI G+ +   + + +E   +M   G +P+EVT + +L AC   G +  G   F+SM
Sbjct: 542 SWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601

Query: 365 -----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                  P +  +  M+    ++    +A +    M F+    D       L +C     
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA---DVLVWRTFLGACRVHSN 658

Query: 420 LESGK 424
            E GK
Sbjct: 659 TELGK 663



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 25/371 (6%)

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
            DL  + S LD+ A++G      V FS+L +  + + +  +     K    + IE     
Sbjct: 40  GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLG----KLVHARLIEF---- 91

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP---SPSVSSWNAMLSSYSQSENHK 386
                EPD V   +++    +SGD+   +++F++M       V SW+AM++ +  +    
Sbjct: 92  ---EIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREF 148

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG-- 444
           +AIKLF E    G+ P+      ++ +C+    +  G+ +    +KT  H ++ V  G  
Sbjct: 149 DAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTG-HFESDVCVGCS 207

Query: 445 LIGIYSKCQRN-ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
           LI ++ K + + E A +VF ++ EL++V W  MI          EA  FF  M  +    
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC---GDIYGAR 560
            +F+ ++V S+CA+L +   GRQ+H+   + G  +D  V  +L++MY KC   G +   R
Sbjct: 268 DKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCR 325

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQN-GYGDEAVRLYKDMIASG-VKPDDITFVAILTACSH 618
           + FD M   + ++W  +I GY QN     EA+ L+ +MI  G V+P+  TF +   AC +
Sbjct: 326 KVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385

Query: 619 SGLVDVGVEIF 629
                VG ++ 
Sbjct: 386 VSDPRVGKQVL 396


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 227/772 (29%), Positives = 379/772 (49%), Gaps = 107/772 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H  + +     +T +CN LI +Y  C+     Q                          
Sbjct: 184 VHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQ-------------------------- 217

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM----------SNEGFVPT 119
              A ++FD  P R++++WN L+S   + G      +++  M           NE    +
Sbjct: 218 ---AQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGS 274

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
            IT  S+   S+ +LD    R     V+K G   ++YV +AL+S +A+ G    A  +F 
Sbjct: 275 LITATSLSSCSSGVLDQVFAR-----VLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFI 329

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            + E N VT   ++ GL K     EA+ +F +  R +  +++ +   +L   A       
Sbjct: 330 NLKERNAVTLNGLIVGLVKQHCSEEAVGIF-MGTRDSFVVNTDTFVVLLSAVAE------ 382

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
              F+  ++   R   G++VH   ++ G  +  + LSN L++MYAK G +D A  +F  L
Sbjct: 383 ---FSIPEDGLMR---GREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLL 436

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
             R  VSWN +I+   Q      A+     M+     P    +I+ L +C     +  G+
Sbjct: 437 CARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQ 496

Query: 359 -----------------------------------EMFDSMPSPSVSSWNA----MLSSY 379
                                              E+F+SM    + SWN+    M+SS+
Sbjct: 497 QVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSH 556

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           + +    E++++F  M   G+ P++ T   +LS+ + + +LE GKQVHA  LK  +  DN
Sbjct: 557 APT---AESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDN 613

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAF-MFFKQMR 497
            V + L+  Y+K    +  E++F  +    D V WNSMI+G   N    E     +  M 
Sbjct: 614 AVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMH 673

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
            N+M     +F+ VL++CA +++  +G ++HA   +    +D+ V SAL++MY KCG I 
Sbjct: 674 SNQMLDC-CTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRID 732

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A + F+ M  KN  +WN MI GYA++G G++A+ ++++M  +G  PD +TFV++L+ACS
Sbjct: 733 YASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACS 792

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           H+GLVD G++ F  M+ DHG+ P ++HY+C+ID LGRAG   + +  I+ MP K + +IW
Sbjct: 793 HAGLVDRGLDYFEMME-DHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIW 851

Query: 678 EVLLSSCRLHAN---VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDD 726
             +L +CR   +   + L K A+  L  L+P+N   Y L +N Y++ GRW+D
Sbjct: 852 RTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWED 903



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 200/754 (26%), Positives = 331/754 (43%), Gaps = 110/754 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           A + LH  +++ GL  D FL N L+ LY+K                              
Sbjct: 74  APERLHLELVKRGLTHDLFLSNHLVNLYAK------------------------------ 103

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG---FVPTHIT 122
               L  A ++FD M ERN VSW  L+S  V +G+ ++A  V+  M  EG     PT  T
Sbjct: 104 -GSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFT 162

Query: 123 LASVFKA-STALLD-VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC--GWTKHAVPVF 178
             SV +A   A  D +    + HGLV K     N  V NAL+S+Y  C  G    A  VF
Sbjct: 163 FGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVF 222

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID----SVSLSSVLGVCARE 234
           +     + +T+ A+MS  AK   VV    +F  M+    +I+      +  S++   +  
Sbjct: 223 DTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLS 282

Query: 235 GC--GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
            C  GV   VFA+                  +K G  +DL++ ++L+  +A++G +D A+
Sbjct: 283 SCSSGVLDQVFAR-----------------VLKSGSSSDLYVGSALVSAFARHGMLDEAK 325

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE------------------LLQRMKSCGF 334
            IF NL ER+ V+ N +I G  +++ S +A+                   LL  +     
Sbjct: 326 DIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFVVLLSAVAEFSI 385

Query: 335 EPDEVTS------------------------INMLVACVRSGDIKTGREMFDSMPSPSVS 370
             D +                          +NM   C   G I     +F  + +    
Sbjct: 386 PEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKC---GAIDKASRVFRLLCARDRV 442

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           SWN ++S   Q+   + A+  +  M+   + P        LSSCA++ +L +G+QVH  +
Sbjct: 443 SWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDA 502

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL-SLNSLDIEA 489
           +K    +D  V++ L+ +Y  C     +  +F+ + E DIV WNS++  + S ++   E+
Sbjct: 503 VKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAES 562

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
              F  M ++ + P + +F  +LS+ + LS    G+QVHA + K G + D  V +AL+  
Sbjct: 563 VEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSC 622

Query: 550 YCKCGDIYGARQFFDMMHG-KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           Y K GD+    Q F  M G ++ V+WN MI GY  NG+  E +     M+ S    D  T
Sbjct: 623 YAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCT 682

Query: 609 FVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           F  +L AC+    ++ G+E+ ++  +   +E  +   + ++D   + G    A  + + M
Sbjct: 683 FSIVLNACASVAALERGMEM-HAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSM 741

Query: 669 PCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
             K++   W  ++S    H     A    EE+ R
Sbjct: 742 SQKNE-FSWNSMISGYARHGLGEKALEIFEEMQR 774



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 67/120 (55%), Gaps = 7/120 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA  +R+ L  D  + + L+++YSKC     A  +F+ M  K+ +SWN+++S   +
Sbjct: 699 GMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYAR 758

Query: 67  SDDLEFAYKLFDEMPERNV-----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
               E A ++F+EM +RN      V++ +++SA    GL ++ L  +  M + G +P HI
Sbjct: 759 HGLGEKALEIFEEM-QRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGILP-HI 816


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 217/720 (30%), Positives = 339/720 (47%), Gaps = 117/720 (16%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE-EMSEPNEVTFTAMMSGLAKTDR 201
           HG ++ +GL   +++ N LL  Y  CG    A  +   +++EPN +T   MM+G AK   
Sbjct: 51  HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110

Query: 202 VVEALEMFRLMIRKAV----------------------------SIDSVSLSSVLGVCAR 233
           + +A E+F  M R+ V                            S DS+  +   G CA 
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFG-CAM 169

Query: 234 EGCG-------------VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE-------ADLH 273
           + CG             + +    Q D   +  +    V C  +    +         + 
Sbjct: 170 KSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVF 229

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
             NS+L  YAK+  +D A  +F ++PER VVSWN+M++   Q  ++ +A+ +   M + G
Sbjct: 230 CRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRG 289

Query: 334 FEPDEVTSINMLVAC----------------VRS-------------------GDIKTGR 358
              D  T  + L AC                +RS                   G  K  R
Sbjct: 290 VRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEAR 349

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            +F S+   +  SW  ++  + Q     E+++LF +M+   +  D+  LA I+S C+   
Sbjct: 350 RVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRM 409

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            +   +Q+H+ SLK+       +++ LI +Y+KC   + AE +F  + E DIV W  M+ 
Sbjct: 410 DMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLT 469

Query: 479 GLSLNSLDIEAFMFFKQMR--------------------------------QNEMYPTQF 506
             S      +A  FF  M                                 + ++ P   
Sbjct: 470 AYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWV 529

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++ T+   CA + ++  G Q+     K G + D  V +A+I MY KCG I  AR+ FD +
Sbjct: 530 TYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFL 589

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             K+ V+WN MI GY+Q+G G +A+ ++ DM+  G KPD I++VA+L++CSHSGLV  G 
Sbjct: 590 SRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGK 649

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
             F+ ++ DH V P L+H++CM+D L RAG+  EA+ LIDEMP K    +W  LLS+C+ 
Sbjct: 650 FYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKT 709

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           H N  LA+ AA+ LF LD  +S  Y LLA IY+  G+  D   VR+LM +  I K+P YS
Sbjct: 710 HGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYS 769



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 13/182 (7%)

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
           + M  TQ + A  L SC    +    R +H ++   G  + +F+ + L+  Y  CG +  
Sbjct: 23  SHMAVTQ-ALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPD 81

Query: 559 ARQFF--DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
           AR     D+    N +T N M++GYA+ G   +A  L+  M     + D  ++  +++  
Sbjct: 82  ARGLLRGDITE-PNVITHNIMMNGYAKLGSLSDAEELFGRM----PRRDVTSWNTLMSGY 136

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM----LIDEMPCKD 672
             SG     +E F SM+      P    + C +   G  G +HE  +    L+ +   + 
Sbjct: 137 YQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALG-WHEVALQLLGLLTKFGFQG 195

Query: 673 DP 674
           DP
Sbjct: 196 DP 197


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 223/684 (32%), Positives = 342/684 (50%), Gaps = 74/684 (10%)

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCGWTKHAVPV 177
           H  L    K++ AL D    R  H   ++ GL    +  VANALL+ YA+CG    A+ V
Sbjct: 57  HSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEV 116

Query: 178 FEEMSEP--NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL------- 228
           F  +S+   + V+F +++S L    R   AL   R M+     + S +L SVL       
Sbjct: 117 FGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLP 176

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
              A    G E+  FA  +       HG Q      +  F       N+LL MYA+ G +
Sbjct: 177 AAAAAVRLGREAHAFALKNGLL----HGHQ------RFAF-------NALLSMYARLGLV 219

Query: 289 DSAEVIFSN-LPERS-VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
             A+ +F+   P R  VV+WN M++   Q     +A++ L  M + G  PD VT  + L 
Sbjct: 220 ADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALP 279

Query: 347 ACVRSGDIKTGREM------------------------------------FDSMP--SPS 368
           AC R   +  GREM                                    FD +P     
Sbjct: 280 ACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQ 339

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +  WNAM+  Y+Q+   +EA++LF  M+   G  P  TT+A +L +CA        + VH
Sbjct: 340 LGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVH 399

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
              +K     + +V + L+ +Y++  + ++A R+F  +   D+V WN++I G  +     
Sbjct: 400 GYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVA 459

Query: 488 EAFMFFKQMRQNE---MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
           +AF   ++M+Q E   + P   +  T+L  CA L++  +G+++H    +     D+ VGS
Sbjct: 460 DAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 519

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VK 603
           AL++MY KCG +  +R  FD +  +NT+TWN +I  Y  +G G EA  L+  M ASG  +
Sbjct: 520 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 579

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           P+++TF+A L ACSHSG+VD G+++F++M+ DHGVEP  D   C++D LGRAG   EA  
Sbjct: 580 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYA 639

Query: 664 LIDEMPCKDDPV-IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
           ++  M   +  V  W  +L +CRLH NV L + A E L  L+P+ ++ Y LL NIYS+ G
Sbjct: 640 MVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAG 699

Query: 723 RWDDLRAVRELMSENCIVKDPAYS 746
           +W     VR  M    + K+P  S
Sbjct: 700 QWTRAAEVRSRMRRRGVAKEPGCS 723



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 261/580 (45%), Gaps = 78/580 (13%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPE--RNVVSWNNLISALVRNGLEEKALSVYNKMSNEG 115
           NA+L+A  +   L  A ++F  + +   + VS+N+LISAL      + AL+    M   G
Sbjct: 98  NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 157

Query: 116 FVPTHITLASVFKA----STALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCG 169
              T  TL SV +A      A   V  GR  H   +K GL      +  NALLS+YA+ G
Sbjct: 158 HPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLG 217

Query: 170 WTKHAVPVFEEMS--EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
               A  +F   +    + VT+  M+S L ++    EA++    M+   V  D V+ +S 
Sbjct: 218 LVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASA 277

Query: 228 LGVCAREGCGVE-SDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKN 285
           L  C+R    +E  DV             G+++H   IK     A+  ++++L+DMYA +
Sbjct: 278 LPACSR----LELLDV-------------GREMHAYVIKDDELAANSFVASALVDMYATH 320

Query: 286 GDMDSAEVIFSNLPE--RSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSI 342
             +  A  +F  +P+  + +  WN MI GY Q     +A+ L  RM++  GF P E T  
Sbjct: 321 EQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMA 380

Query: 343 NMLVACVRS-----------------------------------GDIKTGREMFDSMPSP 367
           ++L AC RS                                   G     R +F  +  P
Sbjct: 381 SVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLP 440

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQF---RGVKPDRTTLAIILSSCAAMGILESGK 424
            V SWN +++      +  +A +L REMQ     GV P+  TL  +L  CA +     GK
Sbjct: 441 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK 500

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           ++H  +++ A   D  V S L+ +Y+KC    L+  VF R+P  + + WN +I    ++ 
Sbjct: 501 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHG 560

Query: 485 LDIEAFMFFKQMR-QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN---DI 540
           L  EA + F +M    E  P + +F   L++C+      +G Q+   +E+D  V    DI
Sbjct: 561 LGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDI 620

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMH-GKNTVT-WNEMI 578
              + ++++  + G +  A      M  G+  V+ W+ M+
Sbjct: 621 L--ACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 658



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 180/378 (47%), Gaps = 62/378 (16%)

Query: 7   GKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH--KDIYSWNAILSA 63
           G+ +HA+++++  L  ++F+ + L+++Y+       A+ +FD +P   K +  WNA    
Sbjct: 290 GREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNA---- 345

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHIT 122
                                      +I    + G++E+AL ++ +M  E GFVP   T
Sbjct: 346 ---------------------------MICGYAQAGMDEEALRLFARMEAEAGFVPCETT 378

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           +ASV  A             HG V+K G+  N +V NAL+ +YA+ G T  A  +F  + 
Sbjct: 379 MASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVD 438

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR---KAVSIDSVSLSSVLGVCAREGCGVE 239
            P+ V++  +++G      V +A ++ R M +     V  ++++L ++L      GC + 
Sbjct: 439 LPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLL-----PGCAI- 492

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                      +    G+++H   ++   + D+ + ++L+DMYAK G +  +  +F  LP
Sbjct: 493 ----------LAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP 542

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGR 358
            R+ ++WNV+I  YG      +A  L  RM + G   P+EVT +  L AC  SG +  G 
Sbjct: 543 RRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGL 602

Query: 359 EMFDSM-------PSPSV 369
           ++F +M       P+P +
Sbjct: 603 QLFHAMERDHGVEPTPDI 620



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 190/417 (45%), Gaps = 61/417 (14%)

Query: 55  YSWNAILSAQCKSDDLEFAYKLF-DEMPER-NVVSWNNLISALVRNGLEEKALSVYNKMS 112
           +++NA+LS   +   +  A +LF    P R +VV+WN ++S LV++G+ ++A+     M 
Sbjct: 204 FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMV 263

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWT 171
             G  P  +T AS   A + L  ++ GR  H  VIK   L  N +VA+AL+ +YA     
Sbjct: 264 ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQV 323

Query: 172 KHAVPVFEEMSEPNEV--TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID-SVSLSSVL 228
             A  VF+ + +  +    + AM+ G A+     EAL +F  M  +A  +    +++SVL
Sbjct: 324 GKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVL 383

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
             CAR      S+ FA            + VH   +K G   +  + N+L+DMYA+ G  
Sbjct: 384 PACAR------SEAFAGK----------EAVHGYVVKRGMAGNRFVQNALMDMYARLGKT 427

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL---LQRMKSCGFEPDEVTSINML 345
           D A  IF+ +    VVSWN +I G   +     A +L   +Q+++  G  P+ +T + +L
Sbjct: 428 DVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLL 487

Query: 346 VAC-----------------------------------VRSGDIKTGREMFDSMPSPSVS 370
             C                                    + G +   R +FD +P  +  
Sbjct: 488 PGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTI 547

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGILESGKQV 426
           +WN ++ +Y       EA  LF  M   G  +P+  T    L++C+  G+++ G Q+
Sbjct: 548 TWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQL 604



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 131/309 (42%), Gaps = 47/309 (15%)

Query: 6   AGK-LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           AGK  +H ++++ G+  + F+ N L+++Y++   T  A+ +F  +   D+ SWN +++  
Sbjct: 393 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGC 452

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                +  A++L  EM +                 LEE            G VP  ITL 
Sbjct: 453 VVQGHVADAFQLAREMQQ-----------------LEEG-----------GVVPNAITLM 484

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++      L     G+  HG  ++  LD ++ V +AL+ +YAKCG    +  VF+ +   
Sbjct: 485 TLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRR 544

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
           N +T+  ++          EA  +F R+        + V+  + L  C+  G        
Sbjct: 545 NTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSG-------- 596

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ER 301
                   R +  Q  H +    G E    +   ++D+  + G +D A  + +++   E+
Sbjct: 597 -----MVDRGL--QLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQ 649

Query: 302 SVVSWNVMI 310
            V +W+ M+
Sbjct: 650 QVSAWSTML 658


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 197/669 (29%), Positives = 328/669 (49%), Gaps = 58/669 (8%)

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
            G +  +  LA + KA T      H    H  +I+ G   ++     L       G T+H
Sbjct: 3   RGDISRNTLLALISKACT----FPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRH 58

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           A  +F  + +P+   F  ++ G + +           L+    +S D+ + +  +     
Sbjct: 59  ARALFFSVPKPDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAIS---- 114

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
                     A  D+       G  +H   +  GF+++L ++++L+D+Y K   +  A  
Sbjct: 115 ----------ASPDDNL-----GMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARK 159

Query: 294 IFSNLPERSVVSWNVMIAGY-------------------GQKYQSTK------AIELLQR 328
           +F  +P+R  V WN MI G                    G +  ST       A+  +Q 
Sbjct: 160 VFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQE 219

Query: 329 MK----------SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
           +K            GF  D+     ++    +  D+ T R +F  +  P + S+NA++S 
Sbjct: 220 VKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISG 279

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           +S +   + A+K FRE+   G +   +T+  ++   +  G L     +    +K+ + + 
Sbjct: 280 FSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQ 339

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
             V++ L  IYS+    +LA ++F    E  +  WN+MI+G + + L   A   F++M  
Sbjct: 340 PSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMT 399

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
            E  P   +  ++LS+CA+L +   G+ VH  I+      +I+V +ALI+MY KCG+I  
Sbjct: 400 TEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISE 459

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A Q FD+   KNTVTWN MI GY  +GYGDEA++L+ +M+  G +P  +TF+++L ACSH
Sbjct: 460 ASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSH 519

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
           +GLV  G EIF++M   + +EP+ +HY CM+D LGRAG   +A   I +MP +  P +W 
Sbjct: 520 AGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWG 579

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC 738
            LL +C +H +  LA+ A+E LF LDP N   Y LL+NIYS    +    +VRE + +  
Sbjct: 580 TLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRN 639

Query: 739 IVKDPAYSL 747
           + K P  +L
Sbjct: 640 LSKTPGCTL 648



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 144/559 (25%), Positives = 251/559 (44%), Gaps = 86/559 (15%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           HA ++RNG   D     +L +       T  A+ LF  +P  DI+ +N ++         
Sbjct: 28  HAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLI--------- 78

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
               K F   P+ + +S+   +                  + N    P + T A    AS
Sbjct: 79  ----KGFSFSPDASSISFYTHL------------------LKNTTLSPDNFTYAFAISAS 116

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
               D   G   H   +  G D N++VA+AL+ LY K     +A  VF++M + + V + 
Sbjct: 117 P---DDNLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWN 173

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
            M++GL +     +++++F+ M+ + V +DS ++++VL   A      E  V        
Sbjct: 174 TMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQ---EVKV-------- 222

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
                G  + CL +KLGF  D ++   L+ +++K  D+D+A ++F  + +  +VS+N +I
Sbjct: 223 -----GMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALI 277

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----------------CVRSG-- 352
           +G+    ++  A++  + +   G      T + ++                  CV+SG  
Sbjct: 278 SGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTI 337

Query: 353 -----------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                            +I   R++FD     +V++WNAM+S Y+QS   + AI LF+EM
Sbjct: 338 LQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEM 397

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
                 P+  T+  ILS+CA +G L  GK VH          + YV++ LI +Y+KC   
Sbjct: 398 MTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNI 457

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
             A ++F    E + V WN+MI G  L+    EA   F +M      P+  +F +VL +C
Sbjct: 458 SEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYAC 517

Query: 516 AKLSSSFQGRQV-HAQIEK 533
           +      +G ++ HA + K
Sbjct: 518 SHAGLVREGDEIFHAMVNK 536



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 195/461 (42%), Gaps = 88/461 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LHAH + +G   + F+ + L++LY K +    A+ +FDKMP +D             
Sbjct: 122 GMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRD------------- 168

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                              V WN +I+ LVRN   + ++ V+  M  +G      T+A+V
Sbjct: 169 ------------------TVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATV 210

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   + +V+ G     L +K+G   + YV   L+S+++KC     A  +F  + +P+ 
Sbjct: 211 LPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDL 270

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A++SG +       A++ FR ++     + S ++  ++ V +  G           
Sbjct: 271 VSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFG----------- 319

Query: 247 DNKFSRNVHGQQVHCLT---IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                   H     C+    +K G      +S +L  +Y++  ++D A  +F    E++V
Sbjct: 320 --------HLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTV 371

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------- 348
            +WN MI+GY Q   +  AI L Q M +  F P+ VT  ++L AC               
Sbjct: 372 AAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQL 431

Query: 349 --------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + G+I    ++FD     +  +WN M+  Y       EA
Sbjct: 432 IKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEA 491

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
           +KLF EM   G +P   T   +L +C+  G++  G ++  A
Sbjct: 492 LKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHA 532



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 110/216 (50%), Gaps = 1/216 (0%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            A+ +   + ++++ A +LFDE  E+ V +WN +IS   ++GL E A+S++ +M    F 
Sbjct: 344 TALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFT 403

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  +T+ S+  A   L  +  G+  H L+    L++NIYV+ AL+ +YAKCG    A  +
Sbjct: 404 PNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQL 463

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+  SE N VT+  M+ G        EAL++F  M+       SV+  SVL  C+  G  
Sbjct: 464 FDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLV 523

Query: 238 VESD-VFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
            E D +F    NK+      +   C+   LG    L
Sbjct: 524 REGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQL 559



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 2/146 (1%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           ++IY   A++    K  ++  A +LFD   E+N V+WN +I     +G  ++AL ++N+M
Sbjct: 439 QNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEM 498

Query: 112 SNEGFVPTHITLASVFKA-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
            + GF P+ +T  SV  A S A L  E     H +V K  ++        ++ +  + G 
Sbjct: 499 LHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQ 558

Query: 171 TKHAVPVFEEMS-EPNEVTFTAMMSG 195
            + A+    +M  EP    +  ++  
Sbjct: 559 LEKALEFIRKMPVEPGPAVWGTLLGA 584


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 184/614 (29%), Positives = 313/614 (50%), Gaps = 51/614 (8%)

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           G   H   +F ++S+P+   F  ++ G +       ++ ++   +RK  ++   + +   
Sbjct: 60  GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYT-HLRKKTNLRPDNFTYAF 118

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
            + A               ++      G  +H  +I  G  ++L + ++++D+Y K    
Sbjct: 119 AISAA--------------SRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA 164

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA- 347
           + A  +F  +PER  V WN MI+G+ +      +I +   M   G   D  T   +L A 
Sbjct: 165 ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV 224

Query: 348 -------------CVRS---------------------GDIKTGREMFDSMPSPSVSSWN 373
                        C+ S                     G    GR +FD +  P + S+N
Sbjct: 225 AELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYN 284

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           AM+S Y+ +   + A+ LFRE+   G + + +TL  ++        L+  + +   SLK 
Sbjct: 285 AMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKI 344

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
              +   V++ L  +Y +    + A ++F   PE  +  WN+MI+G + N L   A   F
Sbjct: 345 GIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLF 404

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
           ++M   ++ P   +  ++LS+CA+L +   G+ VH  I+ +   ++++V +AL++MY KC
Sbjct: 405 QEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKC 463

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G I  ARQ FD+M  KN VTWN MI GY  +G+G EA++L+ +M+ SG+ P  +TF++IL
Sbjct: 464 GSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSIL 523

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
            ACSHSGLV  G EIF+SM  ++G +P+ +HY CM+D LGRAG    A   I+ MP +  
Sbjct: 524 YACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPG 583

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
           P +W  LL +C +H N  +A  A++ LF+LDP+N   Y LL+NIYS+   +    +VR++
Sbjct: 584 PAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQV 643

Query: 734 MSENCIVKDPAYSL 747
           + +  + K P  +L
Sbjct: 644 VKKRKLAKTPGCTL 657



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 137/595 (23%), Positives = 262/595 (44%), Gaps = 87/595 (14%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           + A ++ +G+  D     +L   +         + LF+K+   D++ +N           
Sbjct: 33  IQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNV---------- 82

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLASVFK 128
                                LI     NGL + ++ +Y  +  +    P + T A    
Sbjct: 83  ---------------------LIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAIS 121

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           A++ L D   G   H   I  G+  N++V +A++ LY K    + A  VF+ M E + V 
Sbjct: 122 AASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVL 181

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           +  M+SG ++     +++ +F  M+   +S DS +L++VL   A                
Sbjct: 182 WNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVA---------------- 225

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
           +      G  + CL  K G  +D+++   L+ +Y+K G      ++F  + +  ++S+N 
Sbjct: 226 ELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNA 285

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML----------------------- 345
           MI+GY   +++  A+ L + + + G   +  T + ++                       
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345

Query: 346 -------------VACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                        V C R  +++  R++FD  P  S++SWNAM+S Y+Q+     AI LF
Sbjct: 346 IILQPSVSTALTTVYC-RLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLF 404

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           +EM  + + P+  T+  ILS+CA +G L  GK VH          + YV++ L+ +Y+KC
Sbjct: 405 QEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKC 463

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
                A ++F  + + ++V WN+MI G  L+    EA   F +M Q+ + PT  +F ++L
Sbjct: 464 GSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSIL 523

Query: 513 SSCAKLSSSFQGRQV-HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
            +C+      +G ++ H+     G+       + ++++  + G +  A +F + M
Sbjct: 524 YACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERM 578



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 202/455 (44%), Gaps = 83/455 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G LLHAH + +G+  + F+ + +++LY K                               
Sbjct: 132 GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA--------------------------- 164

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               E A K+FD MPER+ V WN +IS   RN   E ++ V+  M + G      TLA+V
Sbjct: 165 ----ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATV 220

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L +   G     L  K GL  ++YV   L+SLY+KCG +     +F+++ +P+ 
Sbjct: 221 LTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDL 280

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ AM+SG         A+ +FR ++     ++S +L  ++ V                
Sbjct: 281 ISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYL-------------- 326

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
              F+     + +  L++K+G      +S +L  +Y +  ++  A  +F   PE+S+ SW
Sbjct: 327 --PFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASW 384

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG--------- 357
           N MI+GY Q   + +AI L Q M      P+ VT  ++L AC + G +  G         
Sbjct: 385 NAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKS 443

Query: 358 --------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                     R++FD M   +V +WNAM++ Y    + KEA+KL
Sbjct: 444 ERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKL 503

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           F EM   G+ P   T   IL +C+  G++  G ++
Sbjct: 504 FYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 6/179 (3%)

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           Q  F T+L++   LS   Q  Q+ AQ+   G   D+   + L   +   G +   RQ F+
Sbjct: 14  QRFFLTLLNNATTLS---QLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFN 70

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVD 623
            +   +   +N +I G++ NG    ++ LY  +   + ++PD+ T+   ++A S      
Sbjct: 71  KVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDER 130

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           VGV + ++  +  GV   L   + ++D   +      A  + D MP + D V+W  ++S
Sbjct: 131 VGV-LLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMIS 187


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 184/614 (29%), Positives = 313/614 (50%), Gaps = 51/614 (8%)

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           G   H   +F ++S+P+   F  ++ G +       ++ ++   +RK  ++   + +   
Sbjct: 60  GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYT-HLRKXTNLRPDNFTYAF 118

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
            + A               ++      G  +H  +I  G  ++L + ++++D+Y K    
Sbjct: 119 AISAA--------------SRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA 164

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA- 347
           + A  +F  +PER  V WN MI+G+ +      +I +   M   G   D  T   +L A 
Sbjct: 165 ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV 224

Query: 348 -------------CVRS---------------------GDIKTGREMFDSMPSPSVSSWN 373
                        C+ S                     G    GR +FD +  P + S+N
Sbjct: 225 AELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYN 284

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           AM+S Y+ +   + A+ LFRE+   G + + +TL  ++        L+  + +   SLK 
Sbjct: 285 AMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKI 344

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
              +   V++ L  +Y +    + A ++F   PE  +  WN+MI+G + N L   A   F
Sbjct: 345 GIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLF 404

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
           ++M   ++ P   +  ++LS+CA+L +   G+ VH  I+ +   ++++V +AL++MY KC
Sbjct: 405 QEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKC 463

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G I  ARQ FD+M  KN VTWN MI GY  +G+G EA++L+ +M+ SG+ P  +TF++IL
Sbjct: 464 GSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSIL 523

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
            ACSHSGLV  G EIF+SM  ++G +P+ +HY CM+D LGRAG    A   I+ MP +  
Sbjct: 524 YACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPG 583

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
           P +W  LL +C +H N  +A  A++ LF+LDP+N   Y LL+NIYS+   +    +VR++
Sbjct: 584 PAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQV 643

Query: 734 MSENCIVKDPAYSL 747
           + +  + K P  +L
Sbjct: 644 VKKRKLAKTPGCTL 657



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/595 (23%), Positives = 261/595 (43%), Gaps = 87/595 (14%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           + A ++ +G+  D     +L   +         + LF+K+   D++ +N           
Sbjct: 33  IQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNV---------- 82

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFVPTHITLASVFK 128
                                LI     NGL + ++ +Y  +       P + T A    
Sbjct: 83  ---------------------LIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAIS 121

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           A++ L D   G   H   I  G+  N++V +A++ LY K    + A  VF+ M E + V 
Sbjct: 122 AASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVL 181

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           +  M+SG ++     +++ +F  M+   +S DS +L++VL   A                
Sbjct: 182 WNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVA---------------- 225

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
           +      G  + CL  K G  +D+++   L+ +Y+K G      ++F  + +  ++S+N 
Sbjct: 226 ELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNA 285

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML----------------------- 345
           MI+GY   +++  A+ L + + + G   +  T + ++                       
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345

Query: 346 -------------VACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                        V C R  +++  R++FD  P  S++SWNAM+S Y+Q+     AI LF
Sbjct: 346 IILQPSVSTALTTVYC-RLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLF 404

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           +EM  + + P+  T+  ILS+CA +G L  GK VH          + YV++ L+ +Y+KC
Sbjct: 405 QEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKC 463

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
                A ++F  + + ++V WN+MI G  L+    EA   F +M Q+ + PT  +F ++L
Sbjct: 464 GSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSIL 523

Query: 513 SSCAKLSSSFQGRQV-HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
            +C+      +G ++ H+     G+       + ++++  + G +  A +F + M
Sbjct: 524 YACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERM 578



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 202/455 (44%), Gaps = 83/455 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G LLHAH + +G+  + F+ + +++LY K                               
Sbjct: 132 GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA--------------------------- 164

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               E A K+FD MPER+ V WN +IS   RN   E ++ V+  M + G      TLA+V
Sbjct: 165 ----ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATV 220

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L +   G     L  K GL  ++YV   L+SLY+KCG +     +F+++ +P+ 
Sbjct: 221 LTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDL 280

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++ AM+SG         A+ +FR ++     ++S +L  ++ V                
Sbjct: 281 ISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYL-------------- 326

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
              F+     + +  L++K+G      +S +L  +Y +  ++  A  +F   PE+S+ SW
Sbjct: 327 --PFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASW 384

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG--------- 357
           N MI+GY Q   + +AI L Q M      P+ VT  ++L AC + G +  G         
Sbjct: 385 NAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKS 443

Query: 358 --------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                     R++FD M   +V +WNAM++ Y    + KEA+KL
Sbjct: 444 ERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKL 503

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           F EM   G+ P   T   IL +C+  G++  G ++
Sbjct: 504 FYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 6/179 (3%)

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           Q  F T+L++   LS   Q  Q+ AQ+   G   D+   + L   +   G +   RQ F+
Sbjct: 14  QRFFLTLLNNATTLS---QLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFN 70

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVD 623
            +   +   +N +I G++ NG    ++ LY  +   + ++PD+ T+   ++A S      
Sbjct: 71  KVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDER 130

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           VGV + ++  +  GV   L   + ++D   +      A  + D MP + D V+W  ++S
Sbjct: 131 VGV-LLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMIS 187


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 199/617 (32%), Positives = 329/617 (53%), Gaps = 47/617 (7%)

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           L+  +  +N  ++ + + G    A  +F  M   +  T+ AM++G +   R+  A  +FR
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 211 LMIRKAVSIDSVSLSSVLGVCA-----REGCGVESDVFAQSDNKFSRNVHGQQVHCLT-- 263
            + R     D+ S +++L   A      +  G+  ++  +    ++  +     H L   
Sbjct: 94  AIPRP----DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149

Query: 264 ----IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
                 L  E D    N +L  Y +NG ++ A  +F++  E  V+SWN +++GY Q  + 
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
           ++A EL  RM        +V S N++V+   R GD+   R +FD+ P   V +W A++S 
Sbjct: 210 SEARELFDRMPG-----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSG 264

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLA--IILSSCAAMGILESGKQV-------HAA 429
           Y+Q+   +EA ++F  M      P+R  ++   ++++     +++  K++       + A
Sbjct: 265 YAQNGMLEEARRVFDAM------PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA 318

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
           S  T   +  Y  +G++         E A+ VF  +P+ D V W +M+A  S      E 
Sbjct: 319 SWNTM--LTGYAQAGML---------EEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
              F +M +   +  + +FA VLS+CA +++   G Q+H ++ + GY    FVG+AL+ M
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y KCG++  AR  F+ M  ++ V+WN MI GYA++G+G EA+ ++  M  +  KPDDIT 
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           V +L ACSHSGLV+ G+  F SM  D GV    +HYTCMID LGRAG   EA  L+ +MP
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547

Query: 670 CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRA 729
            + D  +W  LL + R+H N  L + AAE++F L+P+N+  Y LL+NIY+S G+W D R 
Sbjct: 548 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARK 607

Query: 730 VRELMSENCIVKDPAYS 746
           +R +M E  + K P +S
Sbjct: 608 MRVMMEERGVKKVPGFS 624



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 233/497 (46%), Gaps = 50/497 (10%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N+ I  + +      A+ LF  MP +   ++NA+L+    +  L  A  LF  +P  +  
Sbjct: 42  NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNY 101

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S+N L+ AL  +     A  ++++M     V  ++ ++S            H    HGLV
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS------------HAN--HGLV 147

Query: 147 ------IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
                   +  +K+    N +L+ Y + G  + A  +F   +E + +++ A+MSG  +  
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWG 207

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
           ++ EA E+F  M  +    D VS + ++   AR G  VE+           R      V 
Sbjct: 208 KMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEA----------RRLFDAAPVR 253

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
                     D+    +++  YA+NG ++ A  +F  +PER+ VSWN M+A Y Q+    
Sbjct: 254 ----------DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMD 303

Query: 321 KAIELLQRMKSCGFEPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
           +A EL   M  C      V S N ML    ++G ++  + +FD+MP     SW AML++Y
Sbjct: 304 EAKELFN-MMPC----RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAY 358

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           SQ    +E ++LF EM   G   +R+  A +LS+CA +  LE G Q+H   ++    +  
Sbjct: 359 SQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGC 418

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           +V + L+ +Y KC   E A   F  + E D+V WN+MIAG + +    EA   F  MR  
Sbjct: 419 FVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTT 478

Query: 500 EMYPTQFSFATVLSSCA 516
              P   +   VL++C+
Sbjct: 479 STKPDDITLVGVLAACS 495



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 195/406 (48%), Gaps = 37/406 (9%)

Query: 18  GLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEF 72
           GLF+     D    N L+  Y +      A+ LFD+MP +D+ SWN ++S   +  D+  
Sbjct: 183 GLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVE 242

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A +LFD  P R+V +W  ++S   +NG+ E+A  V++ M     V  +  +A+  +    
Sbjct: 243 ARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRM- 301

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
              ++  +    ++      +N+   N +L+ YA+ G  + A  VF+ M + + V++ AM
Sbjct: 302 ---MDEAKELFNMMPC----RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAM 354

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           ++  ++     E L++F  M R    ++  + + VL  CA        D+ A        
Sbjct: 355 LAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCA--------DIAALE------ 400

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G Q+H   I+ G+     + N+LL MY K G+M+ A   F  + ER VVSWN MIAG
Sbjct: 401 --CGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAG 458

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-----PSP 367
           Y +     +A+E+   M++   +PD++T + +L AC  SG ++ G   F SM      + 
Sbjct: 459 YARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTA 518

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
               +  M+    ++    EA  L ++M F   +PD T    +L +
Sbjct: 519 KPEHYTCMIDLLGRAGRLAEAHDLMKDMPF---EPDSTMWGALLGA 561



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 7/123 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH  ++R G     F+ N L+ +Y KC N   A++ F++M  +D+ SWN +++   +
Sbjct: 402 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR 461

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFV---PT 119
               + A ++FD M   +     ++   +++A   +GL EK +S +  M ++  V   P 
Sbjct: 462 HGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPE 521

Query: 120 HIT 122
           H T
Sbjct: 522 HYT 524


>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 768

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 192/635 (30%), Positives = 324/635 (51%), Gaps = 56/635 (8%)

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           L +N  ++N L+++Y +C     A  VF+ M + N V++ A+++  A+  R  +A+ +F 
Sbjct: 76  LARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFS 135

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
            M+R   + D  +L S +  CA  G  G+                 G+QVH   IK    
Sbjct: 136 SMLRLGTAPDEFALGSAVRACAELGDLGL-----------------GRQVHAQAIKSDNG 178

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
             L + N+L+ MY+K+G +     +F  + ++ + SW  +IAG  Q+ +   A+ + + M
Sbjct: 179 GHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREM 238

Query: 330 KSCGFE-PDEVTSINMLVAC------------------------------------VRSG 352
            + G   P+E    ++  AC                                     R  
Sbjct: 239 IAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCN 298

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            + +  ++F  + SP + SWN++++++S      EA+ LF EM++  +KPD  T+  +L 
Sbjct: 299 KLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLC 358

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +C     L  G+ +H+  +K     D  V + LI +Y++C     A  VFH   + D+V 
Sbjct: 359 ACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVT 418

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           WNS++     +    + F  F+ +  +     + S   VLS+ A+L      +QVHA   
Sbjct: 419 WNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAF 478

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAV 591
           K G V+D  + +ALI+ Y KCG +  A + F++M  G++  +W+ +I GYAQ GY  EA+
Sbjct: 479 KVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEAL 538

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
            L+  M   GVKP+ +TFV +L ACS  GLVD G   ++ M+ ++G+ P  +H +C+ID 
Sbjct: 539 DLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDL 598

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           L RAG   EA   +D+MP + D ++W  LL++ R H +V + KRAAE +  +DP +SA Y
Sbjct: 599 LARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAY 658

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LL NIY+S G W++   +++ M  + + K P  S
Sbjct: 659 VLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKS 693



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 167/675 (24%), Positives = 290/675 (42%), Gaps = 124/675 (18%)

Query: 7   GKLLHAHILRNG-----LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           G+L+H H+L +      L  +T L N LI +Y +C    SA+ +FD M            
Sbjct: 59  GRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGML----------- 107

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                               +RN VSW  +I+A  +N     A+ +++ M   G  P   
Sbjct: 108 --------------------DRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEF 147

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
            L S  +A   L D+  GR+ H   IK     ++ V NAL+++Y+K G       +FE +
Sbjct: 148 ALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERI 207

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVES 240
            + +  ++ ++++GLA+  R ++AL +FR MI + +   +     SV   C+     +E 
Sbjct: 208 RDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLE- 266

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                         +G+Q+H L +K   + + +   SL DMYA+   +DSA  +F  +  
Sbjct: 267 --------------YGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIES 312

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-- 358
             +VSWN +I  +      ++A+ L   M+    +PD +T + +L ACV    ++ GR  
Sbjct: 313 PDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSI 372

Query: 359 ---------------------------------EMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                            ++F       V +WN++L++  Q  + 
Sbjct: 373 HSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHM 432

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++  KLFR +       DR +L  +LS+ A +G  E  KQVHA + K     D  +++ L
Sbjct: 433 EDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNAL 492

Query: 446 IGIYSKCQRNELAERVFHRIPE-LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           I  Y+KC   + A ++F  +    D+  W+S+I G +      EA   F +MR   + P 
Sbjct: 493 IDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPN 552

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF 563
             +F  VL +C+++    +G   ++ +E + G V      S +I++  + G +  A +F 
Sbjct: 553 HVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFV 612

Query: 564 DMM-HGKNTVTWNEMIHG----------------------------------YAQNGYGD 588
           D M    + + WN ++                                    YA +G  +
Sbjct: 613 DQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWN 672

Query: 589 EAVRLYKDMIASGVK 603
           E  RL KDM +SGV+
Sbjct: 673 EFARLKKDMRSSGVQ 687



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 6/210 (2%)

Query: 414 CAAMGILESGKQVH----AASLKTASHIDNYVASG-LIGIYSKCQRNELAERVFHRIPEL 468
           C+ +     G+ VH    A+S   A    N + S  LI +Y +C   + A  VF  + + 
Sbjct: 50  CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           + V W ++IA  + NS   +A   F  M +    P +F+  + + +CA+L     GRQVH
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
           AQ  K      + V +AL+ MY K G +      F+ +  K+  +W  +I G AQ G   
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREM 229

Query: 589 EAVRLYKDMIASGV-KPDDITFVAILTACS 617
           +A+ ++++MIA G+  P++  F ++  ACS
Sbjct: 230 DALHIFREMIAEGMHHPNEFHFGSVFRACS 259



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 8/164 (4%)

Query: 515 CAKLSSSFQGRQVHAQIEKDG-----YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           C++L S  QGR VH  +            +  + + LI MY +C     AR  FD M  +
Sbjct: 50  CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           N V+W  +I  +AQN    +A+ L+  M+  G  PD+    + + AC+  G + +G ++ 
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169

Query: 630 -NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
             +++ D+G   I+ +   ++    ++G   +   L + +  KD
Sbjct: 170 AQAIKSDNGGHLIVQN--ALVTMYSKSGSVGDGFALFERIRDKD 211


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 189/508 (37%), Positives = 278/508 (54%), Gaps = 37/508 (7%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+L+  YAK   ++ A  +F  +P+   VS+N +IA Y ++  +  A +L   M+    +
Sbjct: 78  NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLD 137

Query: 336 PDEVTSINMLVAC---------------------------------VRSGDIKTGREMFD 362
            D  T   ++ AC                                  ++G +K  R +F 
Sbjct: 138 MDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFH 197

Query: 363 SMPSPSVS-SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
            +       SWN+M+ +Y Q     +A++L+ EM  RG+  D  TLA +L++   +  L 
Sbjct: 198 WLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLL 257

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL-AERVFHRIPELDIVCWNSMIAGL 480
            G Q HA  +K+  H +++V SGLI +YSKC    L   +VF  I   D+V WN+MI+G 
Sbjct: 258 GGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGY 317

Query: 481 SL-NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA-QIEKDGYVN 538
           SL   L  EA   F+Q++     P   S   V+S+C+ +SS  QGRQVH   ++ D   N
Sbjct: 318 SLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSN 377

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
            I V +ALI MY KCG++  A+  FD M   NTV++N MI GYAQ+G G +++ L++ M+
Sbjct: 378 RISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRML 437

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
             G  P +ITF+++L AC+H+G V+ G   FN M+   G+EP   H++CMID LGRAG  
Sbjct: 438 EMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKL 497

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
            EAE LI+ +P       W  LL +CR+H NV LA +AA  L +LDP N+APY +LANIY
Sbjct: 498 SEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIY 557

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYS 746
           S  GR  D  +VR+LM +  + K P  S
Sbjct: 558 SDNGRLQDAASVRKLMRDRGVKKKPGCS 585



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 248/516 (48%), Gaps = 61/516 (11%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK LHA  +++ +   T+L N  + LYSKC    +A+ +FD     +++S+N ++SA  
Sbjct: 26  TGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYA 85

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   +E A++LFDEMP+ + VS+N LI+A  R G  + A  ++ +M          TL+ 
Sbjct: 86  KESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSG 145

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP- 184
           +  A    ++V   R+ H L +  GLD  + V NAL++ Y+K G+ K A  +F  +SE  
Sbjct: 146 IITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDR 203

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +EV++ +M+    +     +ALE++  M  + + +D  +L+SVL              F 
Sbjct: 204 DEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL------------TAFT 251

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK-NGDMDSAEVIFSNLPERSV 303
              +       G Q H   IK G+  + H+ + L+D+Y+K  G M     +F  +    +
Sbjct: 252 NVQDLLG----GLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307

Query: 304 VSWNVMIAGYG-QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------- 348
           V WN MI+GY   +  S +A+E  ++++  G  PD+ + + ++ AC              
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHG 367

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G+++  + +FD+MP  +  S+N+M++ Y+Q     
Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGF 427

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SG 444
           +++ LF+ M   G  P   T   +L++CA  G +E GK ++   +K    I+      S 
Sbjct: 428 QSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSC 486

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           +I +  +  +   AER+   IP +     W++++  
Sbjct: 487 MIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGA 522



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 256/573 (44%), Gaps = 108/573 (18%)

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K   A  D+  G+  H L IK  +  + Y++N  L LY+KC     A  VF+   + N 
Sbjct: 15  LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG----------- 235
            +F  ++S  AK   V  A ++F  M +     DSVS ++++   AR G           
Sbjct: 75  FSFNTLISAYAKESYVEVAHQLFDEMPQP----DSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 236 ---CGVESDVFAQSDNKFSRNVHG---QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
                ++ D F  S    +  ++    +Q+H L++  G ++ + + N+L+  Y+KNG + 
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190

Query: 290 SAEVIFSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
            A  IF  L E R  VSWN M+  Y Q  + +KA+EL   M   G   D  T  ++L A 
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 349 VRSGD-----------IKTG-------------------------REMFDSMPSPSVSSW 372
               D           IK+G                         R++FD + +P +  W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310

Query: 373 NAMLSSYSQSEN-HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           N M+S YS  E+   EA++ FR++Q  G +PD  +L  ++S+C+ M     G+QVH  +L
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370

Query: 432 K---TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
           K    ++ I   V + LI +YSKC     A+ +F  +PE + V +NSMIAG + + +  +
Sbjct: 371 KLDIPSNRIS--VNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQ 428

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIE 548
           +   F++M +    PT  +F +VL++CA                  G V D         
Sbjct: 429 SLHLFQRMLEMGFTPTNITFISVLAACA----------------HTGRVED--------- 463

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVT-----WNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
                G IY     F+MM  K  +      ++ MI    + G   EA RL + +      
Sbjct: 464 -----GKIY-----FNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETI---PFD 510

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNS-MQLD 635
           P    + A+L AC   G V++ ++  N  +QLD
Sbjct: 511 PGFFFWSALLGACRIHGNVELAIKAANRLLQLD 543



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 192/373 (51%), Gaps = 28/373 (7%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPE-RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
           NA++++  K+  L+ A ++F  + E R+ VSWN+++ A +++    KAL +Y +M+  G 
Sbjct: 177 NALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGL 236

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK-HAV 175
           +    TLASV  A T + D+  G + H  +IK G  +N +V + L+ LY+KCG       
Sbjct: 237 IVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCR 296

Query: 176 PVFEEMSEPNEVTFTAMMSGLA-KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
            VF+E+S P+ V +  M+SG +   D   EALE FR +       D  SL  V+  C+  
Sbjct: 297 KVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACS-- 354

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD-LHLSNSLLDMYAKNGDMDSAEV 293
                           S    G+QVH L +KL   ++ + ++N+L+ MY+K G++  A+ 
Sbjct: 355 --------------NMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKT 400

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +F  +PE + VS+N MIAGY Q     +++ L QRM   GF P  +T I++L AC  +G 
Sbjct: 401 LFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGR 460

Query: 354 IKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
           ++ G+  F+ M       P    ++ M+    ++    EA +L   + F    P     +
Sbjct: 461 VEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPF---DPGFFFWS 517

Query: 409 IILSSCAAMGILE 421
            +L +C   G +E
Sbjct: 518 ALLGACRIHGNVE 530



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 236/492 (47%), Gaps = 56/492 (11%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ +H L IK       +LSN  L +Y+K   + +A  +F +  + +V S+N +I+ Y +
Sbjct: 27  GKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAK 86

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
           +                                     ++   ++FD MP P   S+N +
Sbjct: 87  E-----------------------------------SYVEVAHQLFDEMPQPDSVSYNTL 111

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA-MGILESGKQVHAASLKTA 434
           +++Y++  + + A +LF EM+   +  D  TL+ I+++C   +G++   +Q+HA S+ T 
Sbjct: 112 IAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLI---RQLHALSVVTG 168

Query: 435 SHIDNYVASG--LIGIYSKCQRNELAERVFHRIPE-LDIVCWNSMIAGLSLNSLDIEAFM 491
             +D+YV+ G  LI  YSK    + A R+FH + E  D V WNSM+     +    +A  
Sbjct: 169 --LDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALE 226

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            + +M    +    F+ A+VL++   +     G Q HA++ K GY  +  VGS LI++Y 
Sbjct: 227 LYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYS 286

Query: 552 KCGD-IYGARQFFDMMHGKNTVTWNEMIHGYA-QNGYGDEAVRLYKDMIASGVKPDDITF 609
           KCG  +   R+ FD +   + V WN MI GY+      DEA+  ++ +   G +PDD + 
Sbjct: 287 KCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSL 346

Query: 610 VAILTACSHSGLVDVGVEIFN-SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           V +++ACS+      G ++   +++LD     I  +   +I    + G+  +A+ L D M
Sbjct: 347 VCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVN-NALIAMYSKCGNLRDAKTLFDTM 405

Query: 669 PCKDDPVIWEVLLSSCRLHA----NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRW 724
           P + + V +  +++    H     ++ L +R  E  F   P N    S+LA   +  GR 
Sbjct: 406 P-EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGF--TPTNITFISVLAAC-AHTGRV 461

Query: 725 DDLRAVRELMSE 736
           +D +    +M +
Sbjct: 462 EDGKIYFNMMKQ 473



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 143/311 (45%), Gaps = 48/311 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTH-SAQHLFDKMPHKDIYSWNAILSA 63
           + G   HA ++++G   ++ + + LI+LYSKC       + +FD++ + D+  WN ++S 
Sbjct: 257 LGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMIS- 315

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                     Y L+++                    L ++AL  + ++   G  P   +L
Sbjct: 316 ---------GYSLYED--------------------LSDEALECFRQLQVVGHRPDDCSL 346

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEEMS 182
             V  A + +     GR+ HGL +K+ +  N I V NAL+++Y+KCG  + A  +F+ M 
Sbjct: 347 VCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP 406

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           E N V++ +M++G A+     ++L +F+ M+    +  +++  SVL  CA  G       
Sbjct: 407 EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTG------- 459

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
               D K   N+  Q       K G E +    + ++D+  + G +  AE +   +P + 
Sbjct: 460 -RVEDGKIYFNMMKQ-------KFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDP 511

Query: 302 SVVSWNVMIAG 312
               W+ ++  
Sbjct: 512 GFFFWSALLGA 522



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 4/127 (3%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +F   L +C        G+ +HA   K       ++ +  + +Y KC  +  AR+ FD  
Sbjct: 10  NFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
           H  N  ++N +I  YA+  Y + A +L+ +M     +PD +++  ++ A +  G      
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEM----PQPDSVSYNTLIAAYARRGDTQPAF 125

Query: 627 EIFNSMQ 633
           ++F  M+
Sbjct: 126 QLFLEMR 132


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 197/653 (30%), Positives = 333/653 (50%), Gaps = 58/653 (8%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           +  GR  H  ++  G   +  +AN+L++LYAKC     A  VF+ ++  + V++  +++ 
Sbjct: 26  LRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINA 85

Query: 196 LAKTDRVVEALE---MFR--LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
            ++      +L    +FR  +M  K +  ++ +L+ V                  + +  
Sbjct: 86  FSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVF----------------TAASTL 129

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
           S +  G+Q H L +K     D+  ++SLL+MY K G +  A  +F  +PER+ VSW  MI
Sbjct: 130 SDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMI 189

Query: 311 AGYGQKYQSTKAIEL--LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF------- 361
           +GY  +  + +A EL  L R +  G   +E    ++L A      + TGR++        
Sbjct: 190 SGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNG 249

Query: 362 ----------------------DSMPSPSVS------SWNAMLSSYSQSENHKEAIKLFR 393
                                 D++ +  +S      +W+AM++ ++Q  +  +A+KLF 
Sbjct: 250 LVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFY 309

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           +M   G  P   TL  ++++C+    +  G+Q+H  SLK    +  YV S L+ +Y+KC 
Sbjct: 310 DMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCG 369

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
               A + F  I + D+V W S+I G   N     A   + +M+   + P   + A+VL 
Sbjct: 370 SIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLK 429

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           +C+ L++  QG+Q+HA I K  +  +I +GSAL  MY KCG +    + F  M  ++ ++
Sbjct: 430 ACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVIS 489

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN MI G +QNG G+E + L++ M   G KPD++TFV +L+ACSH GLVD G   F  M 
Sbjct: 490 WNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMF 549

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
            +  + P ++HY CM+D L RAG  HEA+  I+         +W +LL++ + H +  L 
Sbjct: 550 DEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLG 609

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             A E+L  L    S+ Y LL++IY++LG+W+D+  VR +M    + K+P  S
Sbjct: 610 AYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCS 662



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 164/602 (27%), Positives = 284/602 (47%), Gaps = 92/602 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA IL  G F  T + N LI LY+KC++   A  +FD + +KD             
Sbjct: 29  GRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKD------------- 75

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN-----KMSNEGFVPTHI 121
                             VVSWN LI+A  +      +L V +      M+++  VP   
Sbjct: 76  ------------------VVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAH 117

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           TL  VF A++ L D   GR+ H L +K     +++ A++LL++Y K G    A  +F+EM
Sbjct: 118 TLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEM 177

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI--RKAVSIDSVSLSSVLGVCAREGCGVE 239
            E N V++  M+SG A  +   EA E+F+LM    K  + +    +SVL       C + 
Sbjct: 178 PERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALT---CYML 234

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
            +              G+QVH L +K G    + ++N+L+ MY K G ++ A   F    
Sbjct: 235 VNT-------------GRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSG 281

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            ++ ++W+ M+ G+ Q   S KA++L   M   G  P E T + ++ AC  +  I  GR+
Sbjct: 282 NKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQ 341

Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
           M                                   F+ +  P V  W ++++ Y Q+ +
Sbjct: 342 MHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGD 401

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
           ++ A+ L+ +MQ  GV P+  T+A +L +C+ +  L+ GKQ+HA  +K    ++  + S 
Sbjct: 402 YEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSA 461

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           L  +Y+KC   +   R+F R+P  D++ WN+MI+GLS N    E    F++M      P 
Sbjct: 462 LSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPD 521

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY--VNDIFVGSALIEMYCKCGDIYGARQF 562
             +F  +LS+C+ +    +G  V+ ++  D +     +   + ++++  + G ++ A++F
Sbjct: 522 NVTFVNLLSACSHMGLVDRG-WVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEF 580

Query: 563 FD 564
            +
Sbjct: 581 IE 582



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 133/279 (47%), Gaps = 9/279 (3%)

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           L  C     L  G+ +HA  L T S     +A+ LI +Y+KC     A  VF  I   D+
Sbjct: 17  LVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDV 76

Query: 471 VCWNSMIAGLS---LNSLDIEAFMFFKQ--MRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
           V WN +I   S    ++  +     F+Q  M    + P   +   V ++ + LS S  GR
Sbjct: 77  VSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGR 136

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           Q HA   K    +D+F  S+L+ MYCK G ++ AR  FD M  +N V+W  MI GYA   
Sbjct: 137 QAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQE 196

Query: 586 YGDEAVRLYKDMI--ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
             DEA  L+K M     G   ++  F ++L+A +   LV+ G ++ +S+ + +G+  I+ 
Sbjct: 197 LADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQV-HSLAMKNGLVCIVS 255

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
               ++    + G   +A +   E+    + + W  +++
Sbjct: 256 VANALVTMYVKCGSLEDA-LKTFELSGNKNSITWSAMVT 293



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 112/233 (48%), Gaps = 31/233 (13%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V G+ +H + L+ G     ++ + L+++Y+KC +   A+  F+ +   D+  W +I++
Sbjct: 335 AIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIIT 394

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              ++ D                                E AL++Y KM   G +P  +T
Sbjct: 395 GYVQNGDY-------------------------------EGALNLYGKMQLGGVIPNDLT 423

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           +ASV KA + L  ++ G++ H  +IK      I + +AL ++YAKCG       +F  M 
Sbjct: 424 MASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMP 483

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
             + +++ AM+SGL++  R  E LE+F  M  +    D+V+  ++L  C+  G
Sbjct: 484 ARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMG 536


>gi|357167647|ref|XP_003581265.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g08490-like [Brachypodium
           distachyon]
          Length = 929

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 221/810 (27%), Positives = 378/810 (46%), Gaps = 112/810 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  ++R G      +   ++++Y +C     A+ +FD+M   D   WN +++   +
Sbjct: 105 GRCLHGFVVRTGHAAGVAVAKAVMDMYGRCGTLADARLVFDEMSCPDTVCWNILITGSSR 164

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +   +  + LF  M               V  G +E              +PT +T+A V
Sbjct: 165 AGYFDDVFDLFRSM---------------VACGADES-------------MPTAVTVAVV 196

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT---KHAVPVFEEMSE 183
                 L  +  G   HG V+K GL+ +    NAL+SLYAKCG +     A   F  +  
Sbjct: 197 IPVCAKLRVLRAGMSIHGYVVKTGLESDTLCGNALISLYAKCGGSGTMDDAHRAFSSIGC 256

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            + V++ ++++G ++     EAL +F  M       +  +++++L VC+          F
Sbjct: 257 KDVVSWNSIIAGHSENGLFKEALALFGQMTSDKCLPNYSTVANILPVCS----------F 306

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
            +    + + VHG        ++G   D+ + N+L+  Y+K  +M +AE IF ++  R +
Sbjct: 307 MEHGKYYGKEVHG-----FVFRVGLYVDISVCNALMTHYSKVYEMRAAESIFRSMNTRDI 361

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
           ++WN +I+GY      ++ ++L  R+ S G  PD V+ I++L AC + GD K G  +   
Sbjct: 362 ITWNTIISGYLMNGYHSRVLDLFHRLLSTGMTPDSVSLISLLTACAQVGDAKGGMGVHGY 421

Query: 361 ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENH-K 386
                                            F  + S    SWNA+LS+ ++   H +
Sbjct: 422 IFRHPVLHQETSLMNSLVSFYSQCNRFDDALHAFADILSKDSISWNAILSACAKRGKHIE 481

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           E  KLF EM     + D  T+  ++      G  +  ++ H  SL+     +  VA+ ++
Sbjct: 482 EFFKLFNEMCHEVTRWDSVTILNVVRVSNLCGSTKMVREAHGYSLRVGYIGETSVANAIL 541

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR--------- 497
             Y+KC   + A+ +F  +   +IV +N+MI+    NS   EA + F QM          
Sbjct: 542 DAYAKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKNSSVEEAEIIFNQMSKKDQTTWNL 601

Query: 498 ------QNEM------------YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
                 QN M             P   S   +L +C  LS     RQ H  + +   + D
Sbjct: 602 MIQVYAQNGMCDQAFSLFRQLQCPDTISITNILLACIHLSLVQLVRQCHGYMLR-ASLED 660

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           I +  +L++ Y KCG+I  A   F +   K+ VT+  MI GYA +G  +EAV L+ +M+ 
Sbjct: 661 IHLEGSLLDAYSKCGNITDAYNLFQVSPTKDLVTFTAMIGGYAMHGMAEEAVELFSEMLT 720

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
            G+ PD +   A+L+ACSH+GLVD G++IF S++  + +EP  +HYTCM+D L R G   
Sbjct: 721 LGIGPDHVVLTALLSACSHAGLVDAGIKIFKSVREIYRIEPTAEHYTCMVDLLSRGGRLQ 780

Query: 660 EA-EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
           +A    +D  P   +   W  L+ +C++H +VR+ + AA++LF ++  +   Y  ++NIY
Sbjct: 781 DAYNFALDMPPHLVNANAWGSLIGACKVHGDVRIGQLAADQLFSMEFGDIGNYVTVSNIY 840

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYSLG 748
           ++   WD +  VR+LM    + K    S G
Sbjct: 841 AAGEEWDGVEHVRKLMKSKDMKKPAGCSXG 870



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 196/768 (25%), Positives = 324/768 (42%), Gaps = 138/768 (17%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A+ LFD +P  +    + L+ A   NG    ++S+   M   G  P  + LA+  K+++A
Sbjct: 38  AHSLFDAVPATDHRHCSELLRARTANGDHSGSISLLRGMLGRGLRPDRLALAAAIKSASA 97

Query: 133 LLDVEHGRRC-HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
           L D E   RC HG V++ G    + VA A++ +Y +CG    A  VF+EMS P+ V +  
Sbjct: 98  LRDGESLGRCLHGFVVRTGHAAGVAVAKAVMDMYGRCGTLADARLVFDEMSCPDTVCWNI 157

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSID-----SVSLSSVLGVCAREGCGVESDVFAQS 246
           +++G ++     +  ++FR M+  A   D     +V+++ V+ VCA              
Sbjct: 158 LITGSSRAGYFDDVFDLFRSMV--ACGADESMPTAVTVAVVIPVCA-------------- 201

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIFSNLPERSV 303
             K      G  +H   +K G E+D    N+L+ +YAK   +G MD A   FS++  + V
Sbjct: 202 --KLRVLRAGMSIHGYVVKTGLESDTLCGNALISLYAKCGGSGTMDDAHRAFSSIGCKDV 259

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------- 348
           VSWN +IAG+ +     +A+ L  +M S    P+  T  N+L  C               
Sbjct: 260 VSWNSIIAGHSENGLFKEALALFGQMTSDKCLPNYSTVANILPVCSFMEHGKYYGKEVHG 319

Query: 349 --VRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
              R G                   +++    +F SM +  + +WN ++S Y  +  H  
Sbjct: 320 FVFRVGLYVDISVCNALMTHYSKVYEMRAAESIFRSMNTRDIITWNTIISGYLMNGYHSR 379

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK-TASHIDNYVASGLI 446
            + LF  +   G+ PD  +L  +L++CA +G  + G  VH    +    H +  + + L+
Sbjct: 380 VLDLFHRLLSTGMTPDSVSLISLLTACAQVGDAKGGMGVHGYIFRHPVLHQETSLMNSLV 439

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM-FFKQMRQNEMYPTQ 505
             YS+C R + A   F  I   D + WN++++  +     IE F   F +M         
Sbjct: 440 SFYSQCNRFDDALHAFADILSKDSISWNAILSACAKRGKHIEEFFKLFNEMCHEVTRWDS 499

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG----------- 554
            +   V+       S+   R+ H    + GY+ +  V +A+++ Y KCG           
Sbjct: 500 VTILNVVRVSNLCGSTKMVREAHGYSLRVGYIGETSVANAILDAYAKCGYPQDADVLFRN 559

Query: 555 --------------------DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
                                +  A   F+ M  K+  TWN MI  YAQNG  D+A  L+
Sbjct: 560 LAVRNIVTYNTMISCYLKNSSVEEAEIIFNQMSKKDQTTWNLMIQVYAQNGMCDQAFSLF 619

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDV-----GVEIFNSMQLDHGVEPILDHY---- 645
           + +      PD I+   IL AC H  LV +     G  +  S++  H    +LD Y    
Sbjct: 620 RQLQC----PDTISITNILLACIHLSLVQLVRQCHGYMLRASLEDIHLEGSLLDAYSKCG 675

Query: 646 --------------------TCMIDCLGRAGHFHEAEMLIDEM---PCKDDPVIWEVLLS 682
                               T MI      G   EA  L  EM       D V+   LLS
Sbjct: 676 NITDAYNLFQVSPTKDLVTFTAMIGGYAMHGMAEEAVELFSEMLTLGIGPDHVVLTALLS 735

Query: 683 SCR----LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDD 726
           +C     + A +++ K +  E++R++P  +  Y+ + ++ S  GR  D
Sbjct: 736 ACSHAGLVDAGIKIFK-SVREIYRIEP-TAEHYTCMVDLLSRGGRLQD 781



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 133/585 (22%), Positives = 250/585 (42%), Gaps = 128/585 (21%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHS---AQHLFDKMPHKDIYSWNAILS 62
           AG  +H ++++ GL  DT   N LI LY+KC  + +   A   F  +  KD+ SWN+I++
Sbjct: 208 AGMSIHGYVVKTGLESDTLCGNALISLYAKCGGSGTMDDAHRAFSSIGCKDVVSWNSIIA 267

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              +                               NGL ++AL+++ +M+++  +P + T
Sbjct: 268 GHSE-------------------------------NGLFKEALALFGQMTSDKCLPNYST 296

Query: 123 LASVFKASTALLDVEH----GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
           +A++    + +   EH    G+  HG V ++GL  +I V NAL++ Y+K    + A  +F
Sbjct: 297 VANILPVCSFM---EHGKYYGKEVHGFVFRVGLYVDISVCNALMTHYSKVYEMRAAESIF 353

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
             M+  + +T+  ++SG          L++F  ++   ++ DSVSL S+L  CA+ G   
Sbjct: 354 RSMNTRDIITWNTIISGYLMNGYHSRVLDLFHRLLSTGMTPDSVSLISLLTACAQVG--- 410

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                   D K    VHG       +      +  L NSL+  Y++    D A   F+++
Sbjct: 411 --------DAKGGMGVHGYIFRHPVL----HQETSLMNSLVSFYSQCNRFDDALHAFADI 458

Query: 299 PERSVVSWNVMIAGYGQKYQ-----------------------------------STKAI 323
             +  +SWN +++   ++ +                                   STK +
Sbjct: 459 LSKDSISWNAILSACAKRGKHIEEFFKLFNEMCHEVTRWDSVTILNVVRVSNLCGSTKMV 518

Query: 324 E--------------------LLQRMKSCGFEPD-----------EVTSINMLVAC-VRS 351
                                +L     CG+  D            + + N +++C +++
Sbjct: 519 REAHGYSLRVGYIGETSVANAILDAYAKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKN 578

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
             ++    +F+ M     ++WN M+  Y+Q+    +A  LFR++Q     PD  ++  IL
Sbjct: 579 SSVEEAEIIFNQMSKKDQTTWNLMIQVYAQNGMCDQAFSLFRQLQC----PDTISITNIL 634

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
            +C  + +++  +Q H   L+ AS  D ++   L+  YSKC     A  +F   P  D+V
Sbjct: 635 LACIHLSLVQLVRQCHGYMLR-ASLEDIHLEGSLLDAYSKCGNITDAYNLFQVSPTKDLV 693

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            + +MI G +++ +  EA   F +M    + P       +LS+C+
Sbjct: 694 TFTAMIGGYAMHGMAEEAVELFSEMLTLGIGPDHVVLTALLSACS 738


>gi|255560453|ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539509|gb|EEF41097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 662

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 225/738 (30%), Positives = 354/738 (47%), Gaps = 141/738 (19%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMP 81
           + +  N+ I  +++    + A+ LFDK+  ++  +WN+++S   K  ++  A KLFDEMP
Sbjct: 46  NLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMP 105

Query: 82  ERNVVSWNNLISALVR---NGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEH 138
           ER+VVSWN +IS  V        E+  ++++KM                           
Sbjct: 106 ERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMP-------------------------- 139

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
             RC                N ++S YAK G    A+ +F  M E N V++ AM+SG  +
Sbjct: 140 -ERC------------CVSWNTMISGYAKNGRMDEALGLFNTMPEKNSVSWNAMVSGFLQ 186

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
              VV A+E F+ M  +    D  SLS+                                
Sbjct: 187 NGDVVRAIEFFKRMPER----DVTSLSA-------------------------------- 210

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
              L   L   ++L  +  +L  Y  NG   S E +        V ++N +IAGYGQ+ +
Sbjct: 211 ---LVSGLIQNSELDQAERILLDYGNNGG--SKEYL--------VHAYNTLIAGYGQRGR 257

Query: 319 STKAIELLQRM---------KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSV 369
             +A  L  ++         ++  FE + V+   M++  V++GD+ + R++FD MP    
Sbjct: 258 VDEAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDS 317

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
            SWN M+S Y    + +EA  LF +M      PD  +  +++S  A  G LE        
Sbjct: 318 FSWNTMISGYVHVLDMEEASNLFHKMP----SPDTLSWNLMISGYAQSGSLE-------- 365

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
                                      LA   F R+P+ ++V WNS+IAG   N   I A
Sbjct: 366 ---------------------------LAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGA 398

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
              F QM+       + + +++LS  + +     G Q+H  + K   + D+ + +ALI M
Sbjct: 399 INLFIQMQVEGEKSDRHTLSSLLSVSSGIVDLQLGMQIHQLVSKT-VIPDVPLNNALITM 457

Query: 550 YCKCGDIYGARQ-FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           Y +CG I+ AR  F++M   K  ++WN MI GYA +GY  EA+ L+K M +  V+P  IT
Sbjct: 458 YSRCGAIFEARTIFYEMKLQKEVISWNAMIGGYASHGYATEALELFKLMRSFKVQPTYIT 517

Query: 609 FVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           F+++L AC+H+GLV+ G  IF SM  D+GVEP ++H+  ++D +GR G   EA  LI+ M
Sbjct: 518 FISVLNACAHAGLVEEGRRIFESMVSDYGVEPRVEHFASLVDIVGRQGQLEEALDLINSM 577

Query: 669 PCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLR 728
             + D  +W  LL + R+H NV +A+ AAE L +L+P +S PY LL N+Y  +G+WD+  
Sbjct: 578 TIEPDKAVWGALLGASRVHNNVEMARVAAEALMKLEPDSSVPYILLYNMYVDVGQWDNAA 637

Query: 729 AVRELMSENCIVKDPAYS 746
            +R +M  N I K+ A S
Sbjct: 638 EIRSMMERNNIKKEAAIS 655



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 178/685 (25%), Positives = 303/685 (44%), Gaps = 105/685 (15%)

Query: 12  AHILRNG-------LFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           +H  R G       LFD     +T   N +I  Y K      A+ LFD+MP +D+ SWN 
Sbjct: 55  SHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMPERDVVSWNL 114

Query: 60  ILSA--QCKSDD-LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
           I+S    C+    +E    LFD+MPER  VSWN +IS   +NG  ++AL ++N M     
Sbjct: 115 IISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEALGLFNTMP---- 170

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
                                              +KN    NA++S + + G    A+ 
Sbjct: 171 -----------------------------------EKNSVSWNAMVSGFLQNGDVVRAIE 195

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
            F+ M E +  + +A++SGL +   + +A    R+++    +  S             G 
Sbjct: 196 FFKRMPERDVTSLSALVSGLIQNSELDQAE---RILLDYGNNGGSKEYLVHAYNTLIAGY 252

Query: 237 GVESDVFAQSDNKFSR-NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
           G    V  ++ N F +   +  Q    T +  FE ++   N+++  Y K GD+ SA  +F
Sbjct: 253 GQRGRV-DEAQNLFDKIPFYNDQGKGRTGR--FERNVVSWNTMIMCYVKAGDVISARKLF 309

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
             +P+R   SWN MI+GY       +A  L  +M S    PD ++   M+    +SG ++
Sbjct: 310 DQMPDRDSFSWNTMISGYVHVLDMEEASNLFHKMPS----PDTLSWNLMISGYAQSGSLE 365

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
              + F+ MP  ++ SWN++++ Y ++ ++  AI LF +MQ  G K DR TL+ +LS  +
Sbjct: 366 LAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSDRHTLSSLLSVSS 425

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWN 474
            +  L+ G Q+H    KT    D  + + LI +YS+C     A  +F+ +  + +++ WN
Sbjct: 426 GIVDLQLGMQIHQLVSKTVIP-DVPLNNALITMYSRCGAIFEARTIFYEMKLQKEVISWN 484

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           +MI G + +    EA   FK MR  ++ PT  +F +VL++CA      +GR++   +  D
Sbjct: 485 AMIGGYASHGYATEALELFKLMRSFKVQPTYITFISVLNACAHAGLVEEGRRIFESMVSD 544

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
             V         +E +    DI G                        + G  +EA+ L 
Sbjct: 545 YGV------EPRVEHFASLVDIVG------------------------RQGQLEEALDLI 574

Query: 595 KDMIASGVKPDDITFVAILTAC---SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
             M    ++PD   + A+L A    ++  +  V  E    ++ D  V P +  Y   +D 
Sbjct: 575 NSMT---IEPDKAVWGALLGASRVHNNVEMARVAAEALMKLEPDSSV-PYILLYNMYVD- 629

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVI 676
           +G+  +  E   +++    K +  I
Sbjct: 630 VGQWDNAAEIRSMMERNNIKKEAAI 654



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 204/485 (42%), Gaps = 73/485 (15%)

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           +++L+ SN  +  + + G ++ A  +F  L  R+ V+WN MI+GY ++ + TKA +L   
Sbjct: 44  DSNLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDE 103

Query: 329 MKSCGFEPDEVTSINML----VACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
           M        +V S N++    V+C     I+ GR +FD MP     SWN M+S Y+++  
Sbjct: 104 MPE-----RDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGR 158

Query: 385 HKEAIKLF-------------------------REMQFRGVKPDR--TTLAIILSSCAAM 417
             EA+ LF                         R ++F    P+R  T+L+ ++S     
Sbjct: 159 MDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSGLIQN 218

Query: 418 GILESGKQV------HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP----- 466
             L+  +++      +  S +   H  N + +G    Y +  R + A+ +F +IP     
Sbjct: 219 SELDQAERILLDYGNNGGSKEYLVHAYNTLIAG----YGQRGRVDEAQNLFDKIPFYNDQ 274

Query: 467 --------ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
                   E ++V WN+MI         I A   F QM   +     FS+ T++S    +
Sbjct: 275 GKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRD----SFSWNTMISGYVHV 330

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
               +   +  ++       D    + +I  Y + G +  A  FF+ M  KN V+WN +I
Sbjct: 331 LDMEEASNLFHKMPSP----DTLSWNLMISGYAQSGSLELAHDFFERMPQKNLVSWNSVI 386

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GY +NG    A+ L+  M   G K D  T          SG+VD+ + +     +   V
Sbjct: 387 AGYEKNGDYIGAINLFIQMQVEGEKSDRHT--LSSLLSVSSGIVDLQLGMQIHQLVSKTV 444

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
            P +     +I    R G   EA  +  EM  + + + W  ++     H         A 
Sbjct: 445 IPDVPLNNALITMYSRCGAIFEARTIFYEMKLQKEVISWNAMIGGYASHGYA----TEAL 500

Query: 699 ELFRL 703
           ELF+L
Sbjct: 501 ELFKL 505



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 159/312 (50%), Gaps = 23/312 (7%)

Query: 6   AGKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           AG ++ A  L + + D D+F  N +I  Y    +   A +LF KMP  D  SWN ++S  
Sbjct: 299 AGDVISARKLFDQMPDRDSFSWNTMISGYVHVLDMEEASNLFHKMPSPDTLSWNLMISGY 358

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +S  LE A+  F+ MP++N+VSWN++I+   +NG    A++++ +M  EG      TL+
Sbjct: 359 AQSGSLELAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSDRHTLS 418

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+   S+ ++D++ G + H LV K  +  ++ + NAL+++Y++CG    A  +F EM   
Sbjct: 419 SLLSVSSGIVDLQLGMQIHQLVSKTVI-PDVPLNNALITMYSRCGAIFEARTIFYEMKLQ 477

Query: 185 NEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            EV ++ AM+ G A      EALE+F+LM    V    ++  SVL  CA  G   E    
Sbjct: 478 KEVISWNAMIGGYASHGYATEALELFKLMRSFKVQPTYITFISVLNACAHAGLVEEGRRI 537

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL---PE 300
            +S               +    G E  +    SL+D+  + G ++ A  + +++   P+
Sbjct: 538 FES---------------MVSDYGVEPRVEHFASLVDIVGRQGQLEEALDLINSMTIEPD 582

Query: 301 RSVVSWNVMIAG 312
           ++V  W  ++  
Sbjct: 583 KAV--WGALLGA 592


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 223/684 (32%), Positives = 342/684 (50%), Gaps = 74/684 (10%)

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCGWTKHAVPV 177
           H  L    K++ AL D    R  H   ++ GL    +  VANALL+ YA+CG    A+ V
Sbjct: 57  HSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEV 116

Query: 178 FEEMSEP--NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL------- 228
           F  +S+   + V+F +++S L    R   AL   R M+     + S +L SVL       
Sbjct: 117 FGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLP 176

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
              A    G E+  FA  +       HG Q      +  F       N+LL MYA+ G +
Sbjct: 177 AAAAAVRLGREAHAFALKNGLL----HGHQ------RFAF-------NALLSMYARLGLV 219

Query: 289 DSAEVIFSN-LPERS-VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
             A+ +F+   P R  VV+WN M++   Q     +A++ L  M + G  PD VT  + L 
Sbjct: 220 ADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALP 279

Query: 347 ACVRSGDIKTGREM------------------------------------FDSMP--SPS 368
           AC R   +  GREM                                    FD +P     
Sbjct: 280 ACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQ 339

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +  WNAM+  Y+Q+   +EA++LF  M+   G  P  TT+A +L +CA        + VH
Sbjct: 340 LGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVH 399

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
              +K     + +V + L+ +Y++  + ++A R+F  +   D+V WN++I G  +     
Sbjct: 400 GYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVA 459

Query: 488 EAFMFFKQMRQNE---MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
           +AF   ++M+Q E   + P   +  T+L  CA L++  +G+++H    +     D+ VGS
Sbjct: 460 DAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 519

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VK 603
           AL++MY KCG +  +R  FD +  +NT+TWN +I  Y  +G G EA  L+  M ASG  +
Sbjct: 520 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 579

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           P+++TF+A L ACSHSG+VD G+++F++M+ DHGVEP  D   C++D LGRAG   EA  
Sbjct: 580 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYA 639

Query: 664 LIDEMPCKDDPV-IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
           ++  M   +  V  W  +L +CRLH NV L + A E L  L+P+ ++ Y LL NIYS+ G
Sbjct: 640 MVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAG 699

Query: 723 RWDDLRAVRELMSENCIVKDPAYS 746
           +W     VR  M    + K+P  S
Sbjct: 700 QWTRAAEVRSRMRRRGVAKEPGCS 723



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 261/580 (45%), Gaps = 78/580 (13%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPE--RNVVSWNNLISALVRNGLEEKALSVYNKMSNEG 115
           NA+L+A  +   L  A ++F  + +   + VS+N+LISAL      + AL+    M   G
Sbjct: 98  NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 157

Query: 116 FVPTHITLASVFKA----STALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCG 169
              T  TL SV +A      A   V  GR  H   +K GL      +  NALLS+YA+ G
Sbjct: 158 HPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLG 217

Query: 170 WTKHAVPVFEEMS--EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
               A  +F   +    + VT+  M+S L ++    EA++    M+   V  D V+ +S 
Sbjct: 218 LVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASA 277

Query: 228 LGVCAREGCGVE-SDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKN 285
           L  C+R    +E  DV             G+++H   IK     A+  ++++L+DMYA +
Sbjct: 278 LPACSR----LELLDV-------------GREMHAYVIKDDELAANSFVASALVDMYATH 320

Query: 286 GDMDSAEVIFSNLPE--RSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSI 342
             +  A  +F  +P+  + +  WN MI GY Q     +A+ L  RM++  GF P E T  
Sbjct: 321 EQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMA 380

Query: 343 NMLVACVRS-----------------------------------GDIKTGREMFDSMPSP 367
           ++L AC RS                                   G     R +F  +  P
Sbjct: 381 SVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLP 440

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQF---RGVKPDRTTLAIILSSCAAMGILESGK 424
            V SWN +++      +  +A +L REMQ     GV P+  TL  +L  CA +     GK
Sbjct: 441 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK 500

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           ++H  +++ A   D  V S L+ +Y+KC    L+  VF R+P  + + WN +I    ++ 
Sbjct: 501 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHG 560

Query: 485 LDIEAFMFFKQMR-QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN---DI 540
           L  EA + F +M    E  P + +F   L++C+      +G Q+   +E+D  V    DI
Sbjct: 561 LGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDI 620

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMH-GKNTVT-WNEMI 578
              + ++++  + G +  A      M  G+  V+ W+ M+
Sbjct: 621 L--ACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTML 658



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 180/378 (47%), Gaps = 62/378 (16%)

Query: 7   GKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH--KDIYSWNAILSA 63
           G+ +HA+++++  L  ++F+ + L+++Y+       A+ +FD +P   K +  WNA    
Sbjct: 290 GREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNA---- 345

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHIT 122
                                      +I    + G++E+AL ++ +M  E GFVP   T
Sbjct: 346 ---------------------------MICGYAQAGMDEEALRLFARMEAEAGFVPCETT 378

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           +ASV  A             HG V+K G+  N +V NAL+ +YA+ G T  A  +F  + 
Sbjct: 379 MASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVD 438

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR---KAVSIDSVSLSSVLGVCAREGCGVE 239
            P+ V++  +++G      V +A ++ R M +     V  ++++L ++L      GC + 
Sbjct: 439 LPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLL-----PGCAI- 492

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                      +    G+++H   ++   + D+ + ++L+DMYAK G +  +  +F  LP
Sbjct: 493 ----------LAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP 542

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGR 358
            R+ ++WNV+I  YG      +A  L  RM + G   P+EVT +  L AC  SG +  G 
Sbjct: 543 RRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGL 602

Query: 359 EMFDSM-------PSPSV 369
           ++F +M       P+P +
Sbjct: 603 QLFHAMERDHGVEPTPDI 620



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 190/417 (45%), Gaps = 61/417 (14%)

Query: 55  YSWNAILSAQCKSDDLEFAYKLF-DEMPER-NVVSWNNLISALVRNGLEEKALSVYNKMS 112
           +++NA+LS   +   +  A +LF    P R +VV+WN ++S LV++G+ ++A+     M 
Sbjct: 204 FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMV 263

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWT 171
             G  P  +T AS   A + L  ++ GR  H  VIK   L  N +VA+AL+ +YA     
Sbjct: 264 ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQV 323

Query: 172 KHAVPVFEEMSEPNEV--TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID-SVSLSSVL 228
             A  VF+ + +  +    + AM+ G A+     EAL +F  M  +A  +    +++SVL
Sbjct: 324 GKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVL 383

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
             CAR      S+ FA            + VH   +K G   +  + N+L+DMYA+ G  
Sbjct: 384 PACAR------SEAFAGK----------EAVHGYVVKRGMAGNRFVQNALMDMYARLGKT 427

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL---LQRMKSCGFEPDEVTSINML 345
           D A  IF+ +    VVSWN +I G   +     A +L   +Q+++  G  P+ +T + +L
Sbjct: 428 DVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLL 487

Query: 346 VAC-----------------------------------VRSGDIKTGREMFDSMPSPSVS 370
             C                                    + G +   R +FD +P  +  
Sbjct: 488 PGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTI 547

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGILESGKQV 426
           +WN ++ +Y       EA  LF  M   G  +P+  T    L++C+  G+++ G Q+
Sbjct: 548 TWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQL 604



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 131/309 (42%), Gaps = 47/309 (15%)

Query: 6   AGK-LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           AGK  +H ++++ G+  + F+ N L+++Y++   T  A+ +F  +   D+ SWN +++  
Sbjct: 393 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGC 452

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                +  A++L  EM +                 LEE            G VP  ITL 
Sbjct: 453 VVQGHVADAFQLAREMQQ-----------------LEEG-----------GVVPNAITLM 484

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++      L     G+  HG  ++  LD ++ V +AL+ +YAKCG    +  VF+ +   
Sbjct: 485 TLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRR 544

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
           N +T+  ++          EA  +F R+        + V+  + L  C+  G        
Sbjct: 545 NTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSG-------- 596

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ER 301
                   R +  Q  H +    G E    +   ++D+  + G +D A  + +++   E+
Sbjct: 597 -----MVDRGL--QLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQ 649

Query: 302 SVVSWNVMI 310
            V +W+ M+
Sbjct: 650 QVSAWSTML 658


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 223/684 (32%), Positives = 342/684 (50%), Gaps = 74/684 (10%)

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCGWTKHAVPV 177
           H  L    K++ AL D    R  H   ++ GL    +  VANALL+ YA+CG    A+ V
Sbjct: 59  HSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEV 118

Query: 178 FEEMSEP--NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL------- 228
           F  +S+   + V+F +++S L    R   AL   R M+     + S +L SVL       
Sbjct: 119 FGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLP 178

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
              A    G E+  FA  +       HG Q      +  F       N+LL MYA+ G +
Sbjct: 179 AAAAAVRLGREAHAFALKNGLL----HGHQ------RFAF-------NALLSMYARLGLV 221

Query: 289 DSAEVIFSN-LPERS-VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
             A+ +F+   P R  VV+WN M++   Q     +A++ L  M + G  PD VT  + L 
Sbjct: 222 ADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALP 281

Query: 347 ACVRSGDIKTGREM------------------------------------FDSMP--SPS 368
           AC R   +  GREM                                    FD +P     
Sbjct: 282 ACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQ 341

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVH 427
           +  WNAM+  Y+Q+   +EA++LF  M+   G  P  TT+A +L +CA        + VH
Sbjct: 342 LGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVH 401

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
              +K     + +V + L+ +Y++  + ++A R+F  +   D+V WN++I G  +     
Sbjct: 402 GYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVA 461

Query: 488 EAFMFFKQMRQNE---MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
           +AF   ++M+Q E   + P   +  T+L  CA L++  +G+++H    +     D+ VGS
Sbjct: 462 DAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 521

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VK 603
           AL++MY KCG +  +R  FD +  +NT+TWN +I  Y  +G G EA  L+  M ASG  +
Sbjct: 522 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 581

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           P+++TF+A L ACSHSG+VD G+++F++M+ DHGVEP  D   C++D LGRAG   EA  
Sbjct: 582 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYA 641

Query: 664 LIDEMPCKDDPV-IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
           ++  M   +  V  W  +L +CRLH NV L + A E L  L+P+ ++ Y LL NIYS+ G
Sbjct: 642 MVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAG 701

Query: 723 RWDDLRAVRELMSENCIVKDPAYS 746
           +W     VR  M    + K+P  S
Sbjct: 702 QWTRAAEVRSRMRRRGVAKEPGCS 725



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 261/580 (45%), Gaps = 78/580 (13%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPE--RNVVSWNNLISALVRNGLEEKALSVYNKMSNEG 115
           NA+L+A  +   L  A ++F  + +   + VS+N+LISAL      + AL+    M   G
Sbjct: 100 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 159

Query: 116 FVPTHITLASVFKA----STALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCG 169
              T  TL SV +A      A   V  GR  H   +K GL      +  NALLS+YA+ G
Sbjct: 160 HPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLG 219

Query: 170 WTKHAVPVFEEMS--EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
               A  +F   +    + VT+  M+S L ++    EA++    M+   V  D V+ +S 
Sbjct: 220 LVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASA 279

Query: 228 LGVCAREGCGVE-SDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKN 285
           L  C+R    +E  DV             G+++H   IK     A+  ++++L+DMYA +
Sbjct: 280 LPACSR----LELLDV-------------GREMHAYVIKDDELAANSFVASALVDMYATH 322

Query: 286 GDMDSAEVIFSNLPE--RSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSI 342
             +  A  +F  +P+  + +  WN MI GY Q     +A+ L  RM++  GF P E T  
Sbjct: 323 EQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMA 382

Query: 343 NMLVACVRS-----------------------------------GDIKTGREMFDSMPSP 367
           ++L AC RS                                   G     R +F  +  P
Sbjct: 383 SVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLP 442

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQF---RGVKPDRTTLAIILSSCAAMGILESGK 424
            V SWN +++      +  +A +L REMQ     GV P+  TL  +L  CA +     GK
Sbjct: 443 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK 502

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           ++H  +++ A   D  V S L+ +Y+KC    L+  VF R+P  + + WN +I    ++ 
Sbjct: 503 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHG 562

Query: 485 LDIEAFMFFKQMR-QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN---DI 540
           L  EA + F +M    E  P + +F   L++C+      +G Q+   +E+D  V    DI
Sbjct: 563 LGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDI 622

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMH-GKNTVT-WNEMI 578
              + ++++  + G +  A      M  G+  V+ W+ M+
Sbjct: 623 L--ACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTML 660



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 180/378 (47%), Gaps = 62/378 (16%)

Query: 7   GKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH--KDIYSWNAILSA 63
           G+ +HA+++++  L  ++F+ + L+++Y+       A+ +FD +P   K +  WNA    
Sbjct: 292 GREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNA---- 347

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHIT 122
                                      +I    + G++E+AL ++ +M  E GFVP   T
Sbjct: 348 ---------------------------MICGYAQAGMDEEALRLFARMEAEAGFVPCETT 380

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           +ASV  A             HG V+K G+  N +V NAL+ +YA+ G T  A  +F  + 
Sbjct: 381 MASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVD 440

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR---KAVSIDSVSLSSVLGVCAREGCGVE 239
            P+ V++  +++G      V +A ++ R M +     V  ++++L ++L      GC + 
Sbjct: 441 LPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLL-----PGCAI- 494

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                      +    G+++H   ++   + D+ + ++L+DMYAK G +  +  +F  LP
Sbjct: 495 ----------LAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP 544

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGR 358
            R+ ++WNV+I  YG      +A  L  RM + G   P+EVT +  L AC  SG +  G 
Sbjct: 545 RRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGL 604

Query: 359 EMFDSM-------PSPSV 369
           ++F +M       P+P +
Sbjct: 605 QLFHAMERDHGVEPTPDI 622



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 190/417 (45%), Gaps = 61/417 (14%)

Query: 55  YSWNAILSAQCKSDDLEFAYKLF-DEMPER-NVVSWNNLISALVRNGLEEKALSVYNKMS 112
           +++NA+LS   +   +  A +LF    P R +VV+WN ++S LV++G+ ++A+     M 
Sbjct: 206 FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMV 265

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWT 171
             G  P  +T AS   A + L  ++ GR  H  VIK   L  N +VA+AL+ +YA     
Sbjct: 266 ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQV 325

Query: 172 KHAVPVFEEMSEPNEV--TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID-SVSLSSVL 228
             A  VF+ + +  +    + AM+ G A+     EAL +F  M  +A  +    +++SVL
Sbjct: 326 GKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVL 385

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
             CAR      S+ FA            + VH   +K G   +  + N+L+DMYA+ G  
Sbjct: 386 PACAR------SEAFAGK----------EAVHGYVVKRGMAGNRFVQNALMDMYARLGKT 429

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL---LQRMKSCGFEPDEVTSINML 345
           D A  IF+ +    VVSWN +I G   +     A +L   +Q+++  G  P+ +T + +L
Sbjct: 430 DVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLL 489

Query: 346 VAC-----------------------------------VRSGDIKTGREMFDSMPSPSVS 370
             C                                    + G +   R +FD +P  +  
Sbjct: 490 PGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTI 549

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGILESGKQV 426
           +WN ++ +Y       EA  LF  M   G  +P+  T    L++C+  G+++ G Q+
Sbjct: 550 TWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQL 606



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 131/309 (42%), Gaps = 47/309 (15%)

Query: 6   AGK-LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           AGK  +H ++++ G+  + F+ N L+++Y++   T  A+ +F  +   D+ SWN +++  
Sbjct: 395 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGC 454

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                +  A++L  EM +                 LEE            G VP  ITL 
Sbjct: 455 VVQGHVADAFQLAREMQQ-----------------LEEG-----------GVVPNAITLM 486

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++      L     G+  HG  ++  LD ++ V +AL+ +YAKCG    +  VF+ +   
Sbjct: 487 TLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRR 546

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
           N +T+  ++          EA  +F R+        + V+  + L  C+  G        
Sbjct: 547 NTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSG-------- 598

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ER 301
                   R +  Q  H +    G E    +   ++D+  + G +D A  + +++   E+
Sbjct: 599 -----MVDRGL--QLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQ 651

Query: 302 SVVSWNVMI 310
            V +W+ M+
Sbjct: 652 QVSAWSTML 660


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 201/616 (32%), Positives = 310/616 (50%), Gaps = 82/616 (13%)

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           ++AK G    A  VF EM E + V++T M+ GL +  R  EA++    M     +    +
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
           L++VL  CA    G                  G++VH   +KLG  + + ++NS+L+MY 
Sbjct: 61  LTNVLSSCAVTQAGAV----------------GRKVHSFVVKLGLGSCVPVANSVLNMYG 104

Query: 284 KNGD-------------------------------MDSAEVIFSNLPERSVVSWNVMIAG 312
           K GD                               MD AE +F ++P+RS+VSWN MIAG
Sbjct: 105 KCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAG 164

Query: 313 YGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSS 371
           Y Q     KA++L  RM       PDE T  ++L AC   G+++ G+++           
Sbjct: 165 YNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQV----------- 213

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
                           A  L  EM +      + T A+I S+ A  G +E+ +++   S+
Sbjct: 214 ---------------HAYILRTEMAYN----SQVTNALI-STYAKSGSVENARRIMDQSM 253

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           +T  ++ ++ A  L+  Y K    E A  +F  +   D+V W +MI G   N  + EA  
Sbjct: 254 ETDLNVISFTA--LLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAID 311

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            F+ M      P  ++ A VLS CA L+    G+Q+H +  +        V +A+I MY 
Sbjct: 312 LFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYA 371

Query: 552 KCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
           + G    AR+ FD +   K T+TW  MI   AQ+G G+EAV L+++M+ +GV+PD IT+V
Sbjct: 372 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYV 431

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
            +L+ACSH+G V+ G   ++ ++ +H + P + HY CM+D L RAG F EA+  I  MP 
Sbjct: 432 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPV 491

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
           + D + W  LLS+CR+H N  LA+ AAE+L  +DP NS  YS +AN+YS+ GRW D   +
Sbjct: 492 EPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARI 551

Query: 731 RELMSENCIVKDPAYS 746
            +   E  + K+  +S
Sbjct: 552 WKARKEKAVRKETGFS 567



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 242/501 (48%), Gaps = 60/501 (11%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   G+ +H+ +++ GL     + N ++ +Y KC ++ +A  +F++MP + + SWNA++
Sbjct: 72  QAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMV 131

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTH 120
           S       ++ A  LF+ MP+R++VSWN +I+   +NGL+ KAL ++++M +E    P  
Sbjct: 132 SLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDE 191

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T+ SV  A   L +V  G++ H  +++  +  N  V NAL+S YAK G  ++A  + ++
Sbjct: 192 FTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQ 251

Query: 181 ---------------------------------MSEPNEVTFTAMMSGLAKTDRVVEALE 207
                                            M+  + V +TAM+ G  +  R  EA++
Sbjct: 252 SMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAID 311

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +FR MI      +S +L++VL VCA   C                  +G+Q+HC  I+  
Sbjct: 312 LFRSMITCGPEPNSYTLAAVLSVCASLAC----------------LDYGKQIHCRAIRSL 355

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVSWNVMIAGYGQKYQSTKAIELL 326
            E    +SN+++ MYA++G    A  +F  +  R   ++W  MI    Q  Q  +A+ L 
Sbjct: 356 LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 415

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQ 381
           + M   G EPD +T + +L AC  +G +  G+  +D +      +P +S +  M+   ++
Sbjct: 416 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLAR 475

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
           +    EA +  R M    V+PD      +LS+C      E   ++ A  L +    ++  
Sbjct: 476 AGLFSEAQEFIRRMP---VEPDAIAWGSLLSACRVHKNAELA-ELAAEKLLSIDPNNSGA 531

Query: 442 ASGLIGIYSKCQRNELAERVF 462
            S +  +YS C R   A R++
Sbjct: 532 YSAIANVYSACGRWSDAARIW 552



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 223/520 (42%), Gaps = 125/520 (24%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           KS  L  A  +F EMPER+ VSW  ++  L R G   +A+     M+ +GF PT  TL +
Sbjct: 4   KSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTN 63

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM---- 181
           V  +         GR+ H  V+K+GL   + VAN++L++Y KCG ++ A  VFE M    
Sbjct: 64  VLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRS 123

Query: 182 -------------------------SEPNE--VTFTAMMSGLAKTDRVVEALEMF-RLMI 213
                                    S P+   V++ AM++G  +     +AL++F R++ 
Sbjct: 124 VSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLH 183

Query: 214 RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADL 272
             +++ D  +++SVL  CA  G                 NV  G+QVH   ++     + 
Sbjct: 184 ESSMAPDEFTITSVLSACANLG-----------------NVRIGKQVHAYILRTEMAYNS 226

Query: 273 HLSNSLLDMYAKN---------------------------------GDMDSAEVIFSNLP 299
            ++N+L+  YAK+                                 GDM+SA  +F  + 
Sbjct: 227 QVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMN 286

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------- 348
            R VV+W  MI GY Q  ++ +AI+L + M +CG EP+  T   +L  C           
Sbjct: 287 NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ 346

Query: 349 ------------------------VRSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSE 383
                                    RSG     R MFD +       +W +M+ + +Q  
Sbjct: 347 IHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHG 406

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH---AASLKTASHIDNY 440
             +EA+ LF EM   GV+PDR T   +LS+C+  G +  GK+ +       + A  + +Y
Sbjct: 407 QGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY 466

Query: 441 VASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
               ++ + ++      A+    R+P E D + W S+++ 
Sbjct: 467 AC--MVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSA 504


>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 578

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 173/528 (32%), Positives = 286/528 (54%), Gaps = 37/528 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G Q++ + +K G ++D  + NS +  YAK+   +SA  +F  +P +  +SWN +I GY Q
Sbjct: 45  GIQLYSIVLKSGLDSDFVICNSFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQ 104

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----------------- 358
               T+   + + M  CG  P      +++  CVR GD+K GR                 
Sbjct: 105 NGYFTQGFIMFKEMYECGIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIF 164

Query: 359 -------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                               +FD +   +V SW A++S  S + ++  A+  FR MQ  G
Sbjct: 165 VLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQING 224

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN-ELA 458
           V+P+R TL  IL + A +G  ++GK++H  + +    +D++  S LI IY + +   +LA
Sbjct: 225 VRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLA 284

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
           +  F R    D+V W+S+I     ++  IEA   F+ MR +   P   +   V+++C  L
Sbjct: 285 KLTFERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTL 344

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           +S   G   H  I K G   D ++G+ALI MY KCG +  + Q F  MH K++V+W+ +I
Sbjct: 345 TSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLI 404

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
             Y  +G+G EA+ L+ +M   GV+PD +TF+A+L+AC+HSGLV  G +IF++++ D  V
Sbjct: 405 TAYGLHGHGKEALCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKV 464

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
              ++HY C++D LG++G   +A  ++  MP K    IW  L+S+C++H  + +A+R A+
Sbjct: 465 SLTVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQ 524

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           EL + +P N+A ++LL+ IY+  G W  +  VR LM    + K   +S
Sbjct: 525 ELIKSEPSNAANHTLLSMIYAESGNWFAVEDVRRLMRVQGLSKCYGFS 572



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 245/544 (45%), Gaps = 53/544 (9%)

Query: 95  LVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKN 154
           +V  GL  + L  Y ++ +         + SV KA +       G + + +V+K GLD +
Sbjct: 1   MVSKGLNHQILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSD 60

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
             + N+ +S YAK   T+ A+ VF+ M   + +++  +++G  +     +   MF+ M  
Sbjct: 61  FVICNSFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYE 120

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
             +      ++SV+ VC R G           D K  R +H      + I      ++ +
Sbjct: 121 CGIVPKPELVASVVSVCVRLG-----------DMKLGRAIHA----LVLIDGRIAKEIFV 165

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
             SL+D Y K+GD   A  +F  +  ++VVSW  +++G         A++  + M+  G 
Sbjct: 166 LTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGV 225

Query: 335 EPDEVTSINMLVACVRSGDIKTGREM---------------------------------- 360
            P+ VT I +L A    G  KTG+E+                                  
Sbjct: 226 RPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAK 285

Query: 361 --FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
             F+      V  W++++ SY +S +  EA+KLFR M+  G +P+  TL  ++++C  + 
Sbjct: 286 LTFERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLT 345

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            L++G   H   +K   + D Y+ + LI +YSKC     + ++F  +   D V W+++I 
Sbjct: 346 SLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLIT 405

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
              L+    EA   F +M+   + P   +F  VLS+C       +G+Q+   ++KDG V+
Sbjct: 406 AYGLHGHGKEALCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVS 465

Query: 539 -DIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKD 596
             +   + L+++  K G +  A      M  K +T  W+ ++     +G  + A RL ++
Sbjct: 466 LTVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQE 525

Query: 597 MIAS 600
           +I S
Sbjct: 526 LIKS 529



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 209/460 (45%), Gaps = 84/460 (18%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H  G  L++ +L++GL  D  +CN  I  Y+K + T SA  +FD MP KD  SWN I   
Sbjct: 42  HHFGIQLYSIVLKSGLDSDFVICNSFISFYAKSSCTESALKVFDTMPLKDPISWNCI--- 98

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                                       I+   +NG   +   ++ +M   G VP    +
Sbjct: 99  ----------------------------INGYFQNGYFTQGFIMFKEMYECGIVPKPELV 130

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           ASV      L D++ GR  H LV+  G + K I+V  +L+  Y K G +  A+ VF+++ 
Sbjct: 131 ASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIE 190

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             N V++TA++SG +       AL+ FR M    V  + V+L ++L   A  GC      
Sbjct: 191 VKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKT--- 247

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD-MDSAEVIFSNLPER 301
                        G+++H    + GF+ D H  +SL+ +Y ++ + +  A++ F     +
Sbjct: 248 -------------GKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVK 294

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG---- 357
            VV W+ +I  Y +   S +A++L + M++ G EP+ VT + ++ AC     +K G    
Sbjct: 295 DVVMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTH 354

Query: 358 -------------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                           ++F  M      SW+ ++++Y    + K
Sbjct: 355 GYIVKCGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGK 414

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           EA+ LF EMQ +GV+PD  T   +LS+C   G+++ G+Q+
Sbjct: 415 EALCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQI 454



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 195/415 (46%), Gaps = 27/415 (6%)

Query: 25  LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERN 84
           +C RL ++  K      A  L D    K+I+   +++    KS D   A ++FD++  +N
Sbjct: 136 VCVRLGDM--KLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVKN 193

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
           VVSW  L+S    N     AL  +  M   G  P  +TL ++  A   L   + G+  HG
Sbjct: 194 VVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKEIHG 253

Query: 145 LVIKIGLDKNIYVANALLSLYAKCG-WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
              + G D + +  ++L+ +Y +     + A   FE  +  + V +++++    ++   +
Sbjct: 254 YAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYCRSADSI 313

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           EAL++FR M       +SV+L +V+  C                   +   +G   H   
Sbjct: 314 EALKLFRWMRADGTEPNSVTLLAVITAC----------------TTLTSLKNGYGTHGYI 357

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
           +K G   D ++ N+L++MY+K G + ++  IF  +  +  VSW+ +I  YG      +A+
Sbjct: 358 VKCGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEAL 417

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSS 378
            L   M+  G EPD +T + +L AC  SG +K G+++FD++      S +V  +  ++  
Sbjct: 418 CLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDL 477

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
             +S    +A  + R M    +KP  T  + ++S+C   G LE  +++    +K+
Sbjct: 478 LGKSGKVDDAFDILRAMP---MKPSTTIWSSLVSACKIHGRLEIAERLAQELIKS 529



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 154/312 (49%), Gaps = 12/312 (3%)

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           S+  NH + +K ++E+    +  +   +  ++ +C+       G Q+++  LK+    D 
Sbjct: 3   SKGLNH-QILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDF 61

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            + +  I  Y+K    E A +VF  +P  D + WN +I G   N    + F+ FK+M + 
Sbjct: 62  VICNSFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYEC 121

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYG 558
            + P     A+V+S C +L     GR +HA +  DG +  +IFV ++L++ Y K GD   
Sbjct: 122 GIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLM 181

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           A + FD +  KN V+W  ++ G + N   + A+  ++ M  +GV+P+ +T +AIL A + 
Sbjct: 182 ALRVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAE 241

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHY----TCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
            G    G EI +     HG +  LDH+       I C  R G    A++  +    K D 
Sbjct: 242 LGCAKTGKEI-HGYAFRHGFD--LDHHFLSSLIHIYCRSREG-LQLAKLTFERSNVK-DV 296

Query: 675 VIWEVLLSS-CR 685
           V+W  ++ S CR
Sbjct: 297 VMWSSIIGSYCR 308



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 104/209 (49%), Gaps = 1/209 (0%)

Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
           L+ +   F+K++  +++Y   +   +V+ +C+  +    G Q+++ + K G  +D  + +
Sbjct: 6   LNHQILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICN 65

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
           + I  Y K      A + FD M  K+ ++WN +I+GY QNGY  +   ++K+M   G+ P
Sbjct: 66  SFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVP 125

Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEML 664
                 ++++ C   G + +G  I   + +D  +   +   T ++D   ++G    A  +
Sbjct: 126 KPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRV 185

Query: 665 IDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
            D++  K + V W  L+S C  + +  +A
Sbjct: 186 FDQIEVK-NVVSWTALVSGCSANLDYNMA 213


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 195/621 (31%), Positives = 320/621 (51%), Gaps = 44/621 (7%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV-FEEMSEPNEVTFTAMM 193
           +  H R+ H  +I   L  + Y    L++   +     H   + F     PN   FT+M+
Sbjct: 13  NFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSML 72

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
              +      + + M+  M                     +GCGV  D F       S  
Sbjct: 73  RFYSHLQDHAKVVLMYEQM---------------------QGCGVRPDAFVYPILIKSAG 111

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ERSVVSWNVMIA 311
             G   H   +KLG  +D  + N+++DMYA+ G +  A  +F  +P  ER V  WN M++
Sbjct: 112 TGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVS 171

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSS 371
           GY +     +A  L   M     E + +T   M+    +  D++  R  FD MP  SV S
Sbjct: 172 GYWKWESEGQAQWLFDVMP----ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVS 227

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           WNAMLS Y+Q+   +EA++LF EM   G++PD TT   ++S+C++      G    AASL
Sbjct: 228 WNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSS-----RGDPCLAASL 282

Query: 432 KTASH-----IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
               H     ++ +V + L+ +Y+K    + A ++F+ +P  ++V WNSMIAG + N   
Sbjct: 283 VRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQS 342

Query: 487 IEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             A   FK+M    ++ P + +  +V+S+C  L +   G  V   + ++     I   +A
Sbjct: 343 AMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNA 402

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           +I MY +CG +  A++ F  M  ++ V++N +I G+A +G+G EA+ L   M   G++PD
Sbjct: 403 MIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPD 462

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            +TF+ +LTACSH+GL++ G ++F S++     +P +DHY CM+D LGR G   +A+  +
Sbjct: 463 RVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTM 517

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
           + MP +    ++  LL++ R+H  V L + AA +LF L+P NS  + LL+NIY+S GRW 
Sbjct: 518 ERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWK 577

Query: 726 DLRAVRELMSENCIVKDPAYS 746
           D+  +RE M +  + K   +S
Sbjct: 578 DVERIREAMKKGGVKKTTGWS 598



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 205/414 (49%), Gaps = 58/414 (14%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYS-------------------------- 34
           K A   G   HAH+L+ G   D F+ N +I++Y+                          
Sbjct: 108 KSAGTGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWN 167

Query: 35  -------KCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVS 87
                  K  +   AQ LFD MP +++ +W A+++   K  DLE A + FD MPER+VVS
Sbjct: 168 AMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVS 227

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA----LLDVEHGRRCH 143
           WN ++S   +NGL E+AL ++++M N G  P   T  +V  A ++     L     R  H
Sbjct: 228 WNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH 287

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
              I++    N +V  ALL +YAK G    A  +F  M   N VT+ +M++G A+  +  
Sbjct: 288 QKRIQL----NCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSA 343

Query: 204 EALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            A+E+F+ MI  K ++ D V++ SV+  C   G         +  N   R +   Q    
Sbjct: 344 MAIELFKEMITAKKLTPDEVTMVSVISACGHLGA-------LELGNWVVRFLTENQ---- 392

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            IKL         N+++ MY++ G M+ A+ +F  +  R VVS+N +I+G+       +A
Sbjct: 393 -IKLSISG----HNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEA 447

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
           I L+  MK  G EPD VT I +L AC  +G ++ GR++F+S+  P++  +  M+
Sbjct: 448 INLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYACMV 501


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 197/632 (31%), Positives = 325/632 (51%), Gaps = 55/632 (8%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
           +I+   A LSL A+   TK     F   S   + +    +  L ++  + EAL+  +   
Sbjct: 37  SIFTPIASLSLSAQTRQTKSLS--FANSSTNRQFSSLHEIKKLCESGNLKEALDFLQ--- 91

Query: 214 RKA--VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           R++  V +DS   S  +GV   + CG   D+      +  R +H      ++    F  D
Sbjct: 92  RESDDVVLDSAQRSEAMGVLL-QACGQRKDI------EVGRRLH----EMVSASTQFCND 140

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
             L+  ++ MY+  G    + ++F  L  +++  WN +++ Y +      A+ +   + S
Sbjct: 141 FVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELIS 200

Query: 332 CG-FEPDEVTSINMLVACVRSGDIKTG--------------------------------- 357
               +PD  T   ++ AC    D+  G                                 
Sbjct: 201 VTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVE 260

Query: 358 ---REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
              + +FD M + +VSSWNA+L  Y+Q+ + ++A+ L+ +M   G+ PD  T+  +L +C
Sbjct: 261 EAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 320

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           + M  L  G+++H  +L+    +D ++   L+ +Y  C +   A+ +F  +    +V WN
Sbjct: 321 SRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWN 380

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
            MIAG S N L  EA   F+QM  + + P + +   V  +C++LS+   G+++H    K 
Sbjct: 381 VMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKA 440

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
               DIFV S++I+MY K G I  +++ FD +  K+  +WN +I GY  +G G EA+ L+
Sbjct: 441 HLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELF 500

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           + M+  G+KPDD TF  IL ACSH+GLV+ G+E FN M   H +EP L+HYTC++D LGR
Sbjct: 501 EKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGR 560

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           AG   +A  LI+EMP   D  IW  LLSSCR+H N+ L ++ A +L  L+P+    Y L+
Sbjct: 561 AGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLI 620

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +N+++  G+WDD+R VR  M +  + KD   S
Sbjct: 621 SNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCS 652



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 240/515 (46%), Gaps = 93/515 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCN-RLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ LH  +  +  F + F+ N R+I +YS C +   ++ +FDK+  K             
Sbjct: 124 GRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK------------- 170

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLA 124
                             N+  WN ++SA  RN L E A+S+++++ S     P + TL 
Sbjct: 171 ------------------NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLP 212

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP-VFEEMSE 183
            V KA   LLD+  G+  HG+  K+ L  +++V NAL+++Y KCG  + AV  VF+ M  
Sbjct: 213 CVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDT 272

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
               ++ A++ G A+     +AL+++  M    +  D  ++ S+L  C+R          
Sbjct: 273 KTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSR---------- 322

Query: 244 AQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                   +++H G+++H   ++ G   D  +  SLL +Y   G   +A+V+F  +  RS
Sbjct: 323 -------MKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRS 375

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-- 360
           +VSWNVMIAGY Q     +AI L ++M S G +P E+  + +  AC +   ++ G+E+  
Sbjct: 376 LVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHC 435

Query: 361 ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                            FD +    V+SWN +++ Y      KE
Sbjct: 436 FALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKE 495

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL---KTASHIDNYVASG 444
           A++LF +M   G+KPD  T   IL +C+  G++E G +     L        +++Y    
Sbjct: 496 ALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTC-- 553

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
           ++ +  +  R + A R+   +P + D   W+S+++
Sbjct: 554 VVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLS 588



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 208/441 (47%), Gaps = 55/441 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H    +  L  D F+ N LI +Y KC     A                        
Sbjct: 227 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEA------------------------ 262

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   ++FD M  + V SWN L+    +N    KAL +Y +M++ G  P   T+ S+
Sbjct: 263 ------VKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSL 316

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + +  + +G   HG  ++ GL  + ++  +LLSLY  CG    A  +F+ M   + 
Sbjct: 317 LLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSL 376

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M++G ++     EA+ +FR M+   +    +++  V G C+              
Sbjct: 377 VSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACS-------------- 422

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             + S    G+++HC  +K     D+ +S+S++DMYAK G +  ++ IF  L E+ V SW
Sbjct: 423 --QLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASW 480

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           NV+IAGYG   +  +A+EL ++M   G +PD+ T   +L+AC  +G ++ G E F+ M +
Sbjct: 481 NVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLN 540

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +  ++    ++    +A++L  EM      PD    + +LSSC   G L 
Sbjct: 541 LHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPG---DPDSRIWSSLLSSCRIHGNLG 597

Query: 422 SGKQVHAASLK-TASHIDNYV 441
            G++V    L+      +NYV
Sbjct: 598 LGEKVANKLLELEPEKPENYV 618


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 182/516 (35%), Positives = 286/516 (55%), Gaps = 38/516 (7%)

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           E ++   N+L+  YAK   +  A  +F  +P+  +VS+N +I  Y  +  +  A+ L   
Sbjct: 71  EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130

Query: 329 MKSCGFEPDEVTSINMLVACV---------------------------------RSGDIK 355
           M+  G   D  T   ++ AC                                  ++G ++
Sbjct: 131 MREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILE 190

Query: 356 TGREMFDSMPSPSVS--SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
               +F+ M        SWN+M+ +Y Q +   +A+ L+R+M  RG + D  TLA +L++
Sbjct: 191 EAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTT 250

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN-ELAERVFHRIPELDIVC 472
            + +  L  G Q HA ++KT  + + +V SGLI +Y+KC      + +VF  I   D+V 
Sbjct: 251 FSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVV 310

Query: 473 WNSMIAGLSLNS-LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA-Q 530
           WN+MI+G S N  L +EA   F+QM++   +P   SF   +S+C+ LSS  QG+Q HA  
Sbjct: 311 WNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALA 370

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           ++ +   N I V +AL+ MY KCG++  AR+ F  M   NTVT N +I GYAQ+G G E+
Sbjct: 371 MKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTES 430

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           + L++ M+A+ + P  IT V+IL+AC+H+G V+ G + FN M+   G+EP  +HY+CMID
Sbjct: 431 LNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMID 490

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            LGRAG   EAE LID MP       W  LL +CR + N+ LA++AA +  +L+P N+ P
Sbjct: 491 LLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVP 550

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y +LA++YS+  +W++   +R+LM +  I K P  S
Sbjct: 551 YIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCS 586



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 226/463 (48%), Gaps = 62/463 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GK LH   L++ +   T+L N  I LYSKCN   +A H F++    +++S+NA+++A 
Sbjct: 25  LTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPNVFSFNALIAAY 84

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            K   +  A+ LFD++P+ ++VS+N LI+A    G    ALS++ +M   G V    T +
Sbjct: 85  AKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFS 144

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            V  A    + +   R+ H L    G D  + V N+LL+ Y+K G  + A  VF  M E 
Sbjct: 145 GVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEE 202

Query: 185 --NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV--CAREGCGVES 240
             +EV++ +M+    +  R ++AL ++R M+ +   ID  +L+SVL    C  +  G   
Sbjct: 203 VRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSG--- 259

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG-DMDSAEVIFSNLP 299
                          G Q H   IK GF  + H+ + L+DMYAK G  M  +  +F  + 
Sbjct: 260 ---------------GLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEIC 304

Query: 300 ERSVVSWNVMIAGYGQ-KYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------- 348
              +V WN MI+GY Q K  S +A+E  ++M+  G+ PD+ + +  + AC          
Sbjct: 305 GSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGK 364

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      + G+++  R++F  MP  +  + N++++ Y+Q 
Sbjct: 365 QFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQH 424

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
               E++ LF +M    + P   TL  ILS+CA  G +E GK+
Sbjct: 425 GIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKK 467



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 240/506 (47%), Gaps = 56/506 (11%)

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
           F  T  +   + K+  A  D+  G+  H + +K  +  + Y++N  + LY+KC     A 
Sbjct: 4   FSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAH 63

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF------------RLMIRKAVSIDSVS 223
             F +  EPN  +F A+++  AK   +  A  +F             L+   A   D++S
Sbjct: 64  HAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLS 123

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG-QQVHCLTIKLGFEADLHLSNSLLDMY 282
             S+ G     G  ++   F+        +V   +Q+H L    GF++ + + NSLL  Y
Sbjct: 124 ALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYY 183

Query: 283 AKNGDMDSAEVIFSNLPE--RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           +KNG ++ AE++F+ + E  R  VSWN MI  YGQ  +  KA+ L + M   GFE D  T
Sbjct: 184 SKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFT 243

Query: 341 SINMLV--ACVR--SGD-------IKTG-------------------------REMFDSM 364
             ++L   +CV   SG        IKTG                         R++F+ +
Sbjct: 244 LASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEI 303

Query: 365 PSPSVSSWNAMLSSYSQS-ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
               +  WN M+S YSQ+ E   EA++ FR+MQ  G  PD  +    +S+C+ +     G
Sbjct: 304 CGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQG 363

Query: 424 KQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           KQ HA ++K+    +   V + L+ +YSKC   + A ++F R+P+ + V  NS+IAG + 
Sbjct: 364 KQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQ 423

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD--GYVNDI 540
           + +  E+   F+QM    + PT  +  ++LS+CA      +G++ +  + KD  G   + 
Sbjct: 424 HGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKK-YFNMMKDIFGIEPEA 482

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMM 566
              S +I++  + G +  A +  D M
Sbjct: 483 EHYSCMIDLLGRAGKLSEAERLIDTM 508



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 138/306 (45%), Gaps = 36/306 (11%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC-----------QRNE-- 456
           IL SC A   L +GK +H   LK+      Y+++  I +YSKC           Q +E  
Sbjct: 14  ILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPN 73

Query: 457 ------------------LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
                             +A  +F +IP+ D+V +N++I   +     + A   F +MR+
Sbjct: 74  VFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMRE 133

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
             +    F+F+ V+++C         RQ+H+     G+ + + V ++L+  Y K G +  
Sbjct: 134 MGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEE 191

Query: 559 ARQFFDMM--HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
           A   F+ M    ++ V+WN MI  Y Q+  G +A+ LY+DM+  G + D  T  ++LT  
Sbjct: 192 AEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTF 251

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           S    +  G++ F++  +  G        + +ID   + G        + E  C  D V+
Sbjct: 252 SCVEDLSGGLQ-FHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVV 310

Query: 677 WEVLLS 682
           W  ++S
Sbjct: 311 WNTMIS 316


>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
          Length = 601

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 189/601 (31%), Positives = 308/601 (51%), Gaps = 53/601 (8%)

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M E + V++ +++S         +A      M+R    ++  SL SV+  C  E      
Sbjct: 1   MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTE------ 54

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                 + KF     G  +H L +K+G    ++L+N+L+DMY K GD++++  +F  + E
Sbjct: 55  -----QEEKF-----GLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLE 104

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE- 359
           ++ VSWN  I  +         + + ++M      P  +T  ++L A V  G    GRE 
Sbjct: 105 QNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREV 164

Query: 360 ----------------------------------MFDSMPSPSVSSWNAMLSSYSQSENH 385
                                             +F+ M   +V SWNAM+++  Q+   
Sbjct: 165 HGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAE 224

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            EA +L  +MQ  G  P+  TL  +L +CA M  L+ GKQ+HA S++     D ++++ L
Sbjct: 225 TEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNAL 284

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YSKC +  LA  +F R  E D V +N++I G S +    E+ + FKQMR   +    
Sbjct: 285 IDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDA 343

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            SF   LS+C  LS    G+++H  + +       F+ ++L+++Y K G +  A + F+ 
Sbjct: 344 VSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNK 403

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  K+  +WN MI GY  +G  D A  L++ M   G+  D ++++A+L ACSH GLVD G
Sbjct: 404 ITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKG 463

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            + F+ M +   +EP   HY CM+D LGRAG   +   +I +MP   +  +W  LL +CR
Sbjct: 464 KKYFSQM-VAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACR 522

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAY 745
           +H N+ LA+ AAE LF L P++S  Y+L+ N+Y+  GRW++   +R+LM    + K+PAY
Sbjct: 523 IHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAY 582

Query: 746 S 746
           S
Sbjct: 583 S 583



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 262/542 (48%), Gaps = 58/542 (10%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           MPER+VVSWN+L+SA + NG+   A      M   GF     +L SV  A     + + G
Sbjct: 1   MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
              H L +K+GL+  + +ANAL+ +Y K G  + ++ VF+ M E NEV++ + +      
Sbjct: 61  LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNA 120

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
               + L MFR M    V   S++LSS+L      G     D+             G++V
Sbjct: 121 GFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELG---SFDL-------------GREV 164

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H  +IK   + D+ ++NSL+DMYAK G ++ A  IF  + +R+VVSWN MIA   Q    
Sbjct: 165 HGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAE 224

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----------MFDSMPSPSV 369
           T+A  L+  M+  G  P+ +T +N+L AC R   +K G++          MFD   S ++
Sbjct: 225 TEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNAL 284

Query: 370 ------------------------SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                                    S+N ++  YSQS    E++ LF++M+  G+  D  
Sbjct: 285 IDMYSKCGQLSLARNIFERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAV 344

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           +    LS+C  + + + GK++H   ++       ++++ L+ +Y+K      A ++F++I
Sbjct: 345 SFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKI 404

Query: 466 PELDIVCWNSMIAGLSLNS-LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
            + D+  WN+MI G  ++  +DI AF  F+ M+ + +     S+  VL++C+      +G
Sbjct: 405 TKKDVASWNTMILGYGMHGQIDI-AFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKG 463

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEM-----I 578
           ++  +Q+            + ++++  + G +    +   DM    N+  W  +     I
Sbjct: 464 KKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRI 523

Query: 579 HG 580
           HG
Sbjct: 524 HG 525



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 204/415 (49%), Gaps = 29/415 (6%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           DI+  N+++    K   LE A  +F++M +RNVVSWN +I+ LV+NG E +A  +   M 
Sbjct: 176 DIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQ 235

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             G  P  ITL +V  A   +  ++ G++ H   I+ GL  +++++NAL+ +Y+KCG   
Sbjct: 236 KSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLS 295

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  +FE  SE ++V++  ++ G +++    E+L +F+ M    +  D+VS    L  C 
Sbjct: 296 LARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSAC- 353

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                             S   HG+++HC+ ++        LSNSLLD+Y K G + +A 
Sbjct: 354 ---------------TNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTAS 398

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            IF+ + ++ V SWN MI GYG   Q   A EL + MK  G + D V+ I +L AC   G
Sbjct: 399 KIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGG 458

Query: 353 DIKTGREMFDSMPS----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
            +  G++ F  M +    P    +  M+    ++    +  ++ R+M F     +     
Sbjct: 459 LVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPF---PANSDVWG 515

Query: 409 IILSSCAAMGILESGKQV--HAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            +L +C   G +E  +    H   LK   H   Y    +I +Y++  R   A ++
Sbjct: 516 ALLGACRIHGNIELAQWAAEHLFELKP-EHSGYYTL--MINMYAETGRWNEANKI 567



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 195/403 (48%), Gaps = 52/403 (12%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA++    K  D+E + ++FD M E+N VSWN+ I   +  G     L ++ KMS    +
Sbjct: 80  NALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVM 139

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  ITL+S+  A   L   + GR  HG  IK  +D +I+VAN+L+ +YAK G  + A  +
Sbjct: 140 PGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTI 199

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           FE+M + N V++ AM++ L +     EA  +   M +     +S++L +VL  CAR    
Sbjct: 200 FEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACAR---- 255

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                        +    G+Q+H  +I+ G   DL +SN+L+DMY+K G +  A  IF  
Sbjct: 256 ------------MASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER 303

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
             E+  VS+N +I GY Q     +++ L ++M+S G + D V+ +  L AC         
Sbjct: 304 -SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHG 362

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      + G + T  ++F+ +    V+SWN M+  Y   
Sbjct: 363 KEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMH 422

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
                A +LF  M+  G+  D  +   +L++C+  G+++ GK+
Sbjct: 423 GQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKK 465



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 10/218 (4%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++R  L    FL N L++LY+K     +A  +F+K+  KD+ SWN ++     
Sbjct: 362 GKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGM 421

Query: 67  SDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              ++ A++LF+ M     + + VS+  +++A    GL +K    +++M  +   P  + 
Sbjct: 422 HGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMH 481

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS---LYAKCGWTKHAVPVFE 179
            A +      L       +C  ++  +    N  V  ALL    ++      + A     
Sbjct: 482 YACMVD---LLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLF 538

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
           E+   +   +T M++  A+T R  EA ++ +LM  + V
Sbjct: 539 ELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKV 576


>gi|224079788|ref|XP_002305943.1| predicted protein [Populus trichocarpa]
 gi|222848907|gb|EEE86454.1| predicted protein [Populus trichocarpa]
          Length = 693

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 204/689 (29%), Positives = 339/689 (49%), Gaps = 53/689 (7%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           MP R+VVSW  ++SA V++   E+AL ++ +M   G  P   T +SV +A +AL +   G
Sbjct: 1   MPSRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDG 60

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           +  HG VIK G + N  + + L+ LY+K G  + A  +F  +   + V++T M+S L + 
Sbjct: 61  KCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQA 120

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
            +  +AL ++  MI+  V  +  +   VL      G                   HG+ V
Sbjct: 121 GKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLGLK-----------------HGKVV 163

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H   I  G E +L +  +L+ MY+K   MD A  I    PE     W  +++G  Q  + 
Sbjct: 164 HAHLIVFGVELNLVVKTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKL 223

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VRSG----------- 352
            +A+   Q M++ G   +  T +++L AC                + +G           
Sbjct: 224 REAVVAFQEMEASGILSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNAL 283

Query: 353 ---------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                    +++ G  +F+ + SP V SW ++++  S+   H+ +   + EM   G++P+
Sbjct: 284 VDMYMKCSHEVEDGLRVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPN 343

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             TL+IIL SC A        ++H   +KT +  D  V++ L+  Y+  +R + A  +  
Sbjct: 344 SVTLSIILRSCRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIR 403

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            + + D + +  +   L+       A      M  +++    +S A  LS+ A L+S   
Sbjct: 404 NMSQRDALTYTGLATRLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVET 463

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           G Q+H+   K G  + I V + L+  Y KCG    A + F  +   + V+WN +I   A 
Sbjct: 464 GMQLHSYSVKSGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLAS 523

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
            G+   A+  + DM  +GVKPD +TF+ +L  C+H GLVD+G+E FNSM+  HG+EP LD
Sbjct: 524 YGHISSALSAFDDMRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHGIEPQLD 583

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
           HY C+ D LGRAG   EA  +++ MP + +  I++ LL++C++H  V L +  A    +L
Sbjct: 584 HYVCLFDLLGRAGRLEEAMEILETMPIRPNASIYKTLLAACKVHRIVPLGEDIASRGLKL 643

Query: 704 DPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
           DP + A   +LAN+Y S GR D    +R 
Sbjct: 644 DPSDPAFNLMLANLYDSSGRPDLAATIRR 672



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/545 (25%), Positives = 239/545 (43%), Gaps = 84/545 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++++G   +  L + LI+LYSK  +   A  LF  + + D+ SW         
Sbjct: 60  GKCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWT-------- 111

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +IS+LV+ G   +AL +Y  M   G  P   T   V
Sbjct: 112 -----------------------TMISSLVQAGKWSQALRIYIDMIKAGVYPNEFTFVKV 148

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A+   L ++HG+  H  +I  G++ N+ V  AL+ +Y+KC     AV + +   E + 
Sbjct: 149 L-AAAGFLGLKHGKVVHAHLIVFGVELNLVVKTALVHMYSKCQRMDDAVRISKLTPESDR 207

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
             +TA++SGLA+  ++ EA+  F+ M    +  ++ +  S+L  C+              
Sbjct: 208 FLWTAILSGLAQNLKLREAVVAFQEMEASGILSNNFTYLSILNACSL------------- 254

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK-NGDMDSAEVIFSNLPERSVVS 305
               S ++ G+Q+H   I  G E D+ + N+L+DMY K + +++    +F  +    V+S
Sbjct: 255 --ILSLDL-GRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGLRVFEGIESPDVIS 311

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD----IKTGREMF 361
           W  +IAG  +      + +    M + G +P+ VT   +L +C  +      +K    + 
Sbjct: 312 WTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAKSASQLLKLHGHVI 371

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR----------------------- 398
            +     ++  NA++ +Y+ +E   +A  L R M  R                       
Sbjct: 372 KTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLATRLNQMGHHEMALH 431

Query: 399 --------GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
                    +K D  ++A  LS+ A +  +E+G Q+H+ S+K+       V++GL+  Y 
Sbjct: 432 VINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGSSISVSNGLVSFYG 491

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC     AER F  I E DIV WN +I+ L+       A   F  MR   + P   +F  
Sbjct: 492 KCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALSAFDDMRLTGVKPDSVTFLL 551

Query: 511 VLSSC 515
           VL +C
Sbjct: 552 VLFTC 556



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/431 (24%), Positives = 188/431 (43%), Gaps = 54/431 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA ++  GL DD  + N L+++Y KC                              
Sbjct: 261 GRQIHARVIMAGLEDDIPVGNALVDMYMKC------------------------------ 290

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S ++E   ++F+ +   +V+SW +LI+ L  +G  + +   Y +M+  G  P  +TL+ +
Sbjct: 291 SHEVEDGLRVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSII 350

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            ++  A        + HG VIK   D +I V+NAL+  YA       A  +   MS+ + 
Sbjct: 351 LRSCRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDA 410

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T+T + + L +      AL +   M    + +D  S++  L   A     VE+      
Sbjct: 411 LTYTGLATRLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLN-SVET------ 463

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G Q+H  ++K G  + + +SN L+  Y K G    AE  F+ + E  +VSW
Sbjct: 464 ---------GMQLHSYSVKSGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSW 514

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           N +I+        + A+     M+  G +PD VT + +L  C   G +  G E F+SM  
Sbjct: 515 NGLISVLASYGHISSALSAFDDMRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKE 574

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +  +     ++   +EA+++   M  R   P+ +    +L++C    I+ 
Sbjct: 575 MHGIEPQLDHYVCLFDLLGRAGRLEEAMEILETMPIR---PNASIYKTLLAACKVHRIVP 631

Query: 422 SGKQVHAASLK 432
            G+ + +  LK
Sbjct: 632 LGEDIASRGLK 642



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/503 (22%), Positives = 211/503 (41%), Gaps = 96/503 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++HAH++  G+  +  +   L+ +YSKC     A  +    P  D + W AI      
Sbjct: 160 GKVVHAHLIVFGVELNLVVKTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAI------ 213

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    +S L +N    +A+  + +M   G +  + T  S+
Sbjct: 214 -------------------------LSGLAQNLKLREAVVAFQEMEASGILSNNFTYLSI 248

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW-TKHAVPVFEEMSEPN 185
             A + +L ++ GR+ H  VI  GL+ +I V NAL+ +Y KC    +  + VFE +  P+
Sbjct: 249 LNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGLRVFEGIESPD 308

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++T++++GL++      + + +  M    +  +SV+LS +L  C            A+
Sbjct: 309 VISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRA----------AK 358

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S ++  + +HG       IK   + D+ +SN+L+D YA N  +D A  +  N+ +R  ++
Sbjct: 359 SASQLLK-LHGH-----VIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALT 412

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
           +  +     Q      A+ ++  M +   + D  +    L A      ++TG ++     
Sbjct: 413 YTGLATRLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSV 472

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         F  +  P + SWN ++S  +   +   A+ 
Sbjct: 473 KSGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALS 532

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG-------KQVHAASLKTASHIDNYVAS 443
            F +M+  GVKPD  T  ++L +C   G+++ G       K++H         +D+YV  
Sbjct: 533 AFDDMRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHG----IEPQLDHYVC- 587

Query: 444 GLIGIYSKCQRNELAERVFHRIP 466
            L  +  +  R E A  +   +P
Sbjct: 588 -LFDLLGRAGRLEEAMEILETMP 609


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 184/627 (29%), Positives = 329/627 (52%), Gaps = 52/627 (8%)

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           +++N       LS Y + G+ K+A+ +FE M + +   +  M+ G        +A++ + 
Sbjct: 56  VERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYH 115

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            M    V  D+ +   V+     + CG   D+             G++VH   IK G + 
Sbjct: 116 RMEFGGVRGDNFTYPFVI-----KACGGLYDL-----------AEGERVHGKVIKSGLDL 159

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
           D+++ NSL+ MYAK G ++SAE++F  +P R +VSWN MI+GY       +++   + M+
Sbjct: 160 DIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQ 219

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTGRE------------------------------- 359
           + G + D  + I +L AC   G ++ G+E                               
Sbjct: 220 ASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMD 279

Query: 360 ----MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG-VKPDRTTLAIILSSC 414
               +FD +   S+ +WNAM+  YS +    E+    R+MQ  G + PD  T+  +L  C
Sbjct: 280 YAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPC 339

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           A +  +  GK VH  +++        + + L+ +Y +C + + AE +F ++ E +++ WN
Sbjct: 340 AQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWN 399

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           +MIA  + N  + +A   F+ +    + P   + A++L + A+L+S  +  Q+H  + K 
Sbjct: 400 AMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKL 459

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
              ++ FV ++++ MY KCG++  AR+ FD M  K+ ++WN +I  YA +G+G  ++ L+
Sbjct: 460 KLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELF 519

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
            +M   G +P+  TFV++L +CS +GLV+ G E FNSM+ D+ + P ++HY C++D +GR
Sbjct: 520 SEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGR 579

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
            G+   A+  I+EMP      IW  LL++ R   +V LA+ AAE +  L+  N+  Y LL
Sbjct: 580 TGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLL 639

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVK 741
           +N+Y+  GRW+D+  ++  M +  + K
Sbjct: 640 SNMYAEAGRWEDVERIKFHMKKEGLEK 666



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 269/543 (49%), Gaps = 53/543 (9%)

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           LS+  +   ++ A  LF+ M + +   WN +I   V NGL   A+  Y++M   G    +
Sbjct: 67  LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDN 126

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T   V KA   L D+  G R HG VIK GLD +IY+ N+L+ +YAK G  + A  VF E
Sbjct: 127 FTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFRE 186

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M   + V++ +M+SG         +L  FR M    + +D  S+  +LG C+ EG     
Sbjct: 187 MPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEG----- 241

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                    F RN  G+++HC  ++   E D+ +  SL+DMYAK G MD AE +F  + +
Sbjct: 242 ---------FLRN--GKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITD 290

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVR--------- 350
           +S+V+WN MI GY    QS ++   +++M+  G   PD +T IN+L  C +         
Sbjct: 291 KSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKS 350

Query: 351 --------------------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                      G +K    +F  M   ++ SWNAM++SY+++  
Sbjct: 351 VHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGE 410

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
           +++A+ LF+++  + +KPD TT+A IL + A +  L   +Q+H    K     + +V++ 
Sbjct: 411 NRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNS 470

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           ++ +Y KC     A  +F R+   D++ WN++I   +++     +   F +MR+    P 
Sbjct: 471 IVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPN 530

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFF 563
             +F ++L SC+      +G +    +++D  +N  I     ++++  + G++  A+ F 
Sbjct: 531 GSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFI 590

Query: 564 DMM 566
           + M
Sbjct: 591 EEM 593



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 196/407 (48%), Gaps = 8/407 (1%)

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
           +R +S   E + V+    L + V  G +K   ++F++M       WN M+  +  +    
Sbjct: 49  KRNQSFLVERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFW 108

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           +A+  +  M+F GV+ D  T   ++ +C  +  L  G++VH   +K+   +D Y+ + LI
Sbjct: 109 DAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLI 168

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y+K    E AE VF  +P  D+V WNSMI+G         +   F++M+ + +   +F
Sbjct: 169 IMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRF 228

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           S   +L +C+       G+++H Q+ +     D+ V ++L++MY KCG +  A + FD +
Sbjct: 229 SVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQI 288

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VKPDDITFVAILTACSHSGLVDVG 625
             K+ V WN MI GY+ N    E+    + M   G + PD IT + +L  C+    + +G
Sbjct: 289 TDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLG 348

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCR 685
             + +   + +G  P L   T ++D  G  G    AE L  +M  + + + W  +++S  
Sbjct: 349 KSV-HGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMN-ERNLISWNAMIASYT 406

Query: 686 LHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
            +   R A    ++L     K  A       I S L  + +L ++RE
Sbjct: 407 KNGENRKAMTLFQDLCNKTLKPDA-----TTIASILPAYAELASLRE 448



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 199/407 (48%), Gaps = 52/407 (12%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           DIY  N+++    K   +E A  +F EMP R++VSWN++IS  V  G   ++LS + +M 
Sbjct: 160 DIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQ 219

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             G      ++  +  A +    + +G+  H  +++  L+ ++ V  +L+ +YAKCG   
Sbjct: 220 ASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMD 279

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVC 231
           +A  +F+++++ + V + AM+ G +   +  E+    R M     +  D +++ ++L  C
Sbjct: 280 YAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPC 339

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A+    +E+ +             G+ VH   I+ GF   L L  +L+DMY + G +  A
Sbjct: 340 AQ----LEAILL------------GKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPA 383

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-- 349
           E +F  + ER+++SWN MIA Y +  ++ KA+ L Q + +   +PD  T  ++L A    
Sbjct: 384 ECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAEL 443

Query: 350 ---------------------------------RSGDIKTGREMFDSMPSPSVSSWNAML 376
                                            + G++   RE+FD M    V SWN ++
Sbjct: 444 ASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVI 503

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            +Y+     + +I+LF EM+ +G +P+ +T   +L SC+  G++  G
Sbjct: 504 MAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEG 550



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 223/500 (44%), Gaps = 63/500 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ++R+ L  D  +   L+++Y+KC                              
Sbjct: 246 GKEIHCQMMRSRLELDVMVQTSLVDMYAKCGR---------------------------- 277

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLAS 125
              +++A +LFD++ ++++V+WN +I     N    ++ +   KM   G + P  IT+ +
Sbjct: 278 ---MDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMIN 334

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +      L  +  G+  HG  I+ G   ++ +  AL+ +Y +CG  K A  +F +M+E N
Sbjct: 335 LLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERN 394

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++ AM++   K     +A+ +F+ +  K +  D+ +++S+L   A      E+     
Sbjct: 395 LISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREA----- 449

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                      +Q+H    KL  +++  +SNS++ MY K G++  A  IF  +  + V+S
Sbjct: 450 -----------EQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVIS 498

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN +I  Y        +IEL   M+  GFEP+  T +++L++C  +G +  G E F+SM 
Sbjct: 499 WNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMK 558

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                +P +  +  +L    ++ N   A     EM    + P       +L++    G +
Sbjct: 559 RDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMP---LAPTARIWGSLLTASRNKGDV 615

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV-FHRIPELDIVCWNSMIAG 479
           E   ++ A  + +  H +      L  +Y++  R E  ER+ FH   E           G
Sbjct: 616 ELA-EIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKE-----GLEKSVG 669

Query: 480 LSLNSLDIEAFMFFKQMRQN 499
            S+  L  + F F  Q R +
Sbjct: 670 CSVVDLSSKTFRFVNQDRSD 689


>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 200/602 (33%), Positives = 319/602 (52%), Gaps = 75/602 (12%)

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF- 209
           +D N+   N +++  +K G    A  +F+EM EP+ +T+T ++SG  K   + EA  +F 
Sbjct: 48  VDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFD 107

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
           R+  +K V    V+ ++++G   R      S+  + ++  F+   +   V          
Sbjct: 108 RVDAKKNV----VTWTAMVGGYIR------SNKISDAEKLFNEMPNKNVVSW-------- 149

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
                 N+++D YA+NG +DSA  +F  +PER+VVSWN +++   Q  +  +A  L  RM
Sbjct: 150 ------NTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRM 203

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                E D ++   M+    ++G I   R +FD MP  +V SWNAM++ Y+Q+    EA+
Sbjct: 204 P----ERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEAL 259

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            LF  M      P+R      L S                         N + +GLI   
Sbjct: 260 DLFERM------PERD-----LPSW------------------------NTMITGLI--- 281

Query: 450 SKCQRNEL--AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQF 506
              Q  +L  A ++F+ +P+ +++ W +MI G        EA   F +M   N   P Q 
Sbjct: 282 ---QNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQG 338

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD-- 564
           +F +VL +C+ L+   +G+QVH  I K  Y +  FV SALI MY KCG++  AR+ FD  
Sbjct: 339 TFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDG 398

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
           M   ++ V+WN +I  YA +GYG EA+  +K+M  SG KPDD+T+V +L+ACSH+GLV+ 
Sbjct: 399 MTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEE 458

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G++ F+ +  D  +    DHY C++D  GRAG   EA   I+ +  K    +W  LL+ C
Sbjct: 459 GLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGC 518

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
            +HANV++ K+AA++L  ++P+N+  Y LL+NIY+S G+W +   VR  M +  + K P 
Sbjct: 519 NVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPG 578

Query: 745 YS 746
            S
Sbjct: 579 CS 580



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 241/506 (47%), Gaps = 85/506 (16%)

Query: 26  CNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEM-PERN 84
           CN +I   SK      A+ LFD+M   D+ +W  ++S   K   +E A +LFD +  ++N
Sbjct: 55  CNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKN 114

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
           VV+W  ++   +R+     A  ++N+M N+  V  +  +             ++GR    
Sbjct: 115 VVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGY---------AQNGRIDSA 165

Query: 145 LVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
           + +   + ++N+   N ++S+ A+CG  + A  +F+ M E + +++TAM++GL+K  R+ 
Sbjct: 166 MYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRID 225

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           EA  +F  M  + V    VS ++++                     +++N+   +   L 
Sbjct: 226 EARLLFDRMPERNV----VSWNAMI-------------------TGYAQNLRLDEALDLF 262

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
            ++  E DL   N+++    +NGD+  A  +F+ +P+++V+SW  MI G  Q+ +S +A+
Sbjct: 263 ERMP-ERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEAL 321

Query: 324 ELLQRMKSC-GFEPDEVTSINMLVAC---------------------------------- 348
           ++  RM S  G +P++ T +++L AC                                  
Sbjct: 322 KIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINM 381

Query: 349 -VRSGDIKTGREMF-DSMPSP-SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
             + G++ T R+MF D M S   + SWN ++++Y+     KEAI  F+EM+  G KPD  
Sbjct: 382 YSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDV 441

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHI---DNYVASGLIGIYSKCQRNELAERVF 462
           T   +LS+C+  G++E G +     +K  S +   D+Y       +   C R    +  F
Sbjct: 442 TYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYAC-----LVDLCGRAGRLKEAF 496

Query: 463 HRIPELDIV----CWNSMIAGLSLNS 484
             I  L+       W +++AG ++++
Sbjct: 497 GFIERLETKPSARVWGALLAGCNVHA 522



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 199/408 (48%), Gaps = 37/408 (9%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N +I+ Y++     SA +LF+KMP +++ SWN ++S   +   +E A +LFD MPER+V+
Sbjct: 150 NTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVI 209

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  +I+ L +NG  ++A  ++++M     V  +  +     A    LD         L 
Sbjct: 210 SWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGY--AQNLRLD-----EALDLF 262

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
            ++  ++++   N +++   + G  + A  +F EM + N +++T M++G  +     EAL
Sbjct: 263 ERMP-ERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEAL 321

Query: 207 EMF-RLMIRKAVSIDSVSLSSVLGVCAR-EGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           ++F R++       +  +  SVLG C+   G G                  GQQVH +  
Sbjct: 322 KIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLG-----------------EGQQVHQIIS 364

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN--LPERSVVSWNVMIAGYGQKYQSTKA 322
           K  ++    + ++L++MY+K G++ +A  +F +    +R +VSWN +IA Y       +A
Sbjct: 365 KTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEA 424

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSV-----SSWNAMLS 377
           I   + M+  GF+PD+VT + +L AC  +G ++ G + FD +            +  ++ 
Sbjct: 425 INFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVD 484

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
              ++   KEA      ++    KP       +L+ C     ++ GKQ
Sbjct: 485 LCGRAGRLKEAFGFIERLE---TKPSARVWGALLAGCNVHANVKIGKQ 529



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 39/256 (15%)

Query: 19  LFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           LFD     D      +I   SK      A+ LFD+MP +++ SWNA+++   ++  L+ A
Sbjct: 199 LFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEA 258

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM---------------------- 111
             LF+ MPER++ SWN +I+ L++NG   +A  ++N+M                      
Sbjct: 259 LDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESE 318

Query: 112 ----------SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANAL 161
                     S  G  P   T  SV  A + L  +  G++ H ++ K     + +V +AL
Sbjct: 319 EALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSAL 378

Query: 162 LSLYAKCGWTKHAVPVFEE--MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           +++Y+KCG    A  +F++   S+ + V++  +++  A      EA+  F+ M +     
Sbjct: 379 INMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKP 438

Query: 220 DSVSLSSVLGVCAREG 235
           D V+   +L  C+  G
Sbjct: 439 DDVTYVGLLSACSHAG 454



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 41/196 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDK--MPHKDIYSWNAILSAQ 64
           G+ +H  I +    D TF+ + LI +YSKC    +A+ +FD      +D+ SWN I    
Sbjct: 356 GQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGI---- 411

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                      I+A   +G  ++A++ + +M   GF P  +T  
Sbjct: 412 ---------------------------IAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYV 444

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVAN----ALLSLYAKCGWTKHAVPVFEE 180
            +  A +    VE G +    ++K   D++I V       L+ L  + G  K A    E 
Sbjct: 445 GLLSACSHAGLVEEGLKYFDELVK---DRSILVREDHYACLVDLCGRAGRLKEAFGFIER 501

Query: 181 M-SEPNEVTFTAMMSG 195
           + ++P+   + A+++G
Sbjct: 502 LETKPSARVWGALLAG 517


>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 2000

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 202/616 (32%), Positives = 318/616 (51%), Gaps = 85/616 (13%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
            AL+S + K G  + ++  FE     N V++TA +SG  +    VEA+++F  ++   V 
Sbjct: 122 TALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVK 181

Query: 219 IDSVSLSSVLGVCAREG-CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
            + V+ +SV+  CA  G  G+                 G  V  L +K G+E DL +SNS
Sbjct: 182 PNKVTFTSVVRACANLGDFGL-----------------GMSVLGLIVKTGYEHDLAVSNS 224

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L+ +  + G++  A  +F  + E+ VVSW  ++  Y                        
Sbjct: 225 LITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLY------------------------ 260

Query: 338 EVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                      V   ++   R +FD MP  +  SW+AM++ Y QS   +E+++LF  M  
Sbjct: 261 -----------VEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQ 309

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
            G KP+ +  + ILS+ A++  L++G  +H    K     D +V+S LI +Y KC   + 
Sbjct: 310 EGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKD 369

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNS---------------------------LDIEAF 490
              +F  I E ++V WN+M+ G SLN                            LD E F
Sbjct: 370 GRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQF 429

Query: 491 --MF--FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
             MF  F +M      P + +F+++L +CA  +S  +G+ +H +I K G   D +VG+AL
Sbjct: 430 DEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTAL 489

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKPD 605
            +MY K GDI  +++ F+ M  KN V+W  MI G A++G  +E++ L+++M   S + P+
Sbjct: 490 TDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPN 549

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
           ++ F+A+L ACSHSGLVD G+  FNSM+  +G++P   H+TC++D L RAG   EAE  I
Sbjct: 550 EVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFI 609

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
             MP + +   W  LLS C+ + N  LA+R A +L+ +  KN A Y LL+NIY+S GRW 
Sbjct: 610 YSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWR 669

Query: 726 DLRAVRELMSENCIVK 741
           D+  VR+LM    + K
Sbjct: 670 DVLKVRKLMKAKGLKK 685



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 158/627 (25%), Positives = 288/627 (45%), Gaps = 92/627 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELY-------------------------------SK 35
           G  LHAH+ + G+  + ++  +L+ +Y                                +
Sbjct: 40  GSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISANVQ 99

Query: 36  CNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISAL 95
             N   A+ LFD+MP  +  SW A++S   K   +  +   F+  P +NVVSW   IS  
Sbjct: 100 RGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGY 159

Query: 96  VRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNI 155
           V+NG   +A+ ++ K+      P  +T  SV +A   L D   G    GL++K G + ++
Sbjct: 160 VQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDL 219

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
            V+N+L++L  + G    A  VF+ M E + V++TA++    + D + EA  +F  M ++
Sbjct: 220 AVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQR 279

Query: 216 AVSIDSVSLSSVLGVCAREG---------CGVESDVFAQSDNKFSRNVH----------G 256
               + VS S+++    + G         C +  + F  + + FS  +           G
Sbjct: 280 ----NEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAG 335

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
             +H    K+GFE D+ +S+SL+DMY K G+      +F  + E+++VSWN M+ GY   
Sbjct: 336 MNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGY--- 392

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                   S+N        G ++  + +F+ MP  +  SW+A++
Sbjct: 393 ------------------------SLN--------GHMEEAKYLFNIMPVRNNVSWSAII 420

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           + +   E   E  ++F EM   G  P+++T + +L +CA+   L+ GK +H   +K    
Sbjct: 421 AGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQ 480

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D YV + L  +Y+K    E +++VF+R+P+ + V W +MI GL+ + L  E+   F++M
Sbjct: 481 CDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEM 540

Query: 497 -RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK-DGYVNDIFVGSALIEMYCKCG 554
            + + + P +  F  VL +C+      +G      +E   G        + +++M  + G
Sbjct: 541 EKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAG 600

Query: 555 DIYGARQF-FDMMHGKNTVTWNEMIHG 580
            ++ A +F + M     T  W  ++ G
Sbjct: 601 RLFEAEEFIYSMPFQPETNAWAALLSG 627



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 225/426 (52%), Gaps = 32/426 (7%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           I++ G   D  + N LI L  +    H A+ +FD+M  KD+ SW AIL    + D+L  A
Sbjct: 210 IVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEA 269

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
            ++FDEMP+RN VSW+ +I+   ++G  E++L ++ +M  EGF P     +S+  A  ++
Sbjct: 270 RRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASV 329

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
             ++ G   HG V KIG +K+++V+++L+ +Y KCG TK    +F+ + E N V++ AM+
Sbjct: 330 EALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMV 389

Query: 194 SGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ------- 245
            G +    + EA  +F +M +R  VS  ++    + G    E      +VF +       
Sbjct: 390 GGYSLNGHMEEAKYLFNIMPVRNNVSWSAI----IAGHLDCEQFDEMFEVFNEMILLGEI 445

Query: 246 -SDNKFSRNV----------HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
            + + FS  +           G+ +H   +KLG + D ++  +L DMYAK+GD++S++ +
Sbjct: 446 PNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKV 505

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRSGD 353
           F+ +P+++ VSW  MI G  +   + +++ L + M K+    P+EV  + +L AC  SG 
Sbjct: 506 FNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGL 565

Query: 354 IKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
           +  G   F+SM +     P    +  ++   S++    EA +    M F   +P+    A
Sbjct: 566 VDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPF---QPETNAWA 622

Query: 409 IILSSC 414
            +LS C
Sbjct: 623 ALLSGC 628



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 215/490 (43%), Gaps = 72/490 (14%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G  +H    K G  ++ ++S  LL MY        A+ I  +     +V  N MI+   Q
Sbjct: 40  GSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISANVQ 99

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
           +    +A +L   M     + +E++   ++   ++ G ++     F+  P  +V SW A 
Sbjct: 100 RGNLDEARKLFDEMP----QTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAA 155

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +S Y Q+    EA+KLF ++    VKP++ T   ++ +CA +G    G  V    +KT  
Sbjct: 156 ISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGY 215

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI------------------------- 470
             D  V++ LI +  +     LA  VF R+ E D+                         
Sbjct: 216 EHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDE 275

Query: 471 ------VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
                 V W++MIA    +    E+   F +M Q    P    F+++LS+ A + +   G
Sbjct: 276 MPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAG 335

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
             +H  + K G+  D+FV S+LI+MYCKCG+    R  FD +  KN V+WN M+ GY+ N
Sbjct: 336 MNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLN 395

Query: 585 GYGDEAVRL-------------------------------YKDMIASGVKPDDITFVAIL 613
           G+ +EA  L                               + +MI  G  P+  TF ++L
Sbjct: 396 GHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLL 455

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCK 671
            AC+ +  +D G  +   + +  G++   D Y  T + D   ++G    ++ + + MP K
Sbjct: 456 CACASTASLDKGKNLHGKI-VKLGIQ--CDTYVGTALTDMYAKSGDIESSKKVFNRMPKK 512

Query: 672 DDPVIWEVLL 681
           ++ V W  ++
Sbjct: 513 NE-VSWTAMI 521



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 211/442 (47%), Gaps = 39/442 (8%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG  +H H+ + G   D F+ + LI++Y KC  T   + LFD +  K++ SWNA++    
Sbjct: 334 AGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYS 393

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +  +E A  LF+ MP RN VSW+ +I+  +     ++   V+N+M   G +P   T +S
Sbjct: 394 LNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSS 453

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A  +   ++ G+  HG ++K+G+  + YV  AL  +YAK G  + +  VF  M + N
Sbjct: 454 LLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKN 513

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDV-- 242
           EV++TAM+ GLA++    E+L +F  M +  +++ + V   +VL  C+  G  V+  +  
Sbjct: 514 EVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGL-VDKGLWY 572

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
           F   +  +     G+   C                ++DM ++ G +  AE    ++P + 
Sbjct: 573 FNSMEAVYGLKPKGRHFTC----------------VVDMLSRAGRLFEAEEFIYSMPFQP 616

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE------VTSINMLVACVRSGDIK 355
              +W  +++G     ++ K  EL +R+    +E  E      V   N+  +  R  D+ 
Sbjct: 617 ETNAWAALLSG----CKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVL 672

Query: 356 TGREMFDS--MPSPSVSSW----NAMLSSYSQSENHKEAIKLFREMQFRG--VKPDRTTL 407
             R++  +  +      SW    + + S YS+   H ++ +++  ++  G  +K  +  L
Sbjct: 673 KVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYEMKCFKEVL 732

Query: 408 AIILSSCAAMGILESGKQVHAA 429
           A   S  A++ I    KQ   A
Sbjct: 733 AFCSSKLASIAISNFQKQTSLA 754



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/419 (21%), Positives = 168/419 (40%), Gaps = 100/419 (23%)

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY---------------- 449
           T   +L +    G++  G  +HA   KT    + Y++  L+ +Y                
Sbjct: 23  TCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDF 82

Query: 450 -------------SKCQRNEL--AERVFHRIPEL-------------------------- 468
                        +  QR  L  A ++F  +P+                           
Sbjct: 83  DGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFE 142

Query: 469 -----DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
                ++V W + I+G   N   +EA   F ++ ++E+ P + +F +V+ +CA L     
Sbjct: 143 RNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGL 202

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-------------- 569
           G  V   I K GY +D+ V ++LI +  + G+I+ AR+ FD M  K              
Sbjct: 203 GMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVE 262

Query: 570 -----------------NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
                            N V+W+ MI  Y Q+GY +E++RL+  MI  G KP+   F +I
Sbjct: 263 MDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSI 322

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L+A +    +  G+ I   +    G E  +   + +ID   + G   +   L D +  + 
Sbjct: 323 LSALASVEALQAGMNIHGHVT-KIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTI-LEK 380

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYSLLANIYSSLGRWDDLRAV 730
           + V W  ++    L+ ++  AK     LF + P +N+  +S +   +    ++D++  V
Sbjct: 381 NMVSWNAMVGGYSLNGHMEEAKY----LFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEV 435


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 198/617 (32%), Positives = 328/617 (53%), Gaps = 47/617 (7%)

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           L+  +  +N  ++ + + G    A  +F  M   +  T+ AM++G +   R+  A  +FR
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 211 LMIRKAVSIDSVSLSSVLGVCA-----REGCGVESDVFAQSDNKFSRNVHGQQVHCLT-- 263
            + R     D+ S +++L   A      +  G+  ++  +    ++  +     H L   
Sbjct: 94  AIPRP----DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149

Query: 264 ----IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
                 L  E D    N +L  Y +NG ++ A  +F++  E   +SWN +++GY Q  + 
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKM 209

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
           ++A EL  RM        +V S N++V+   R GD+   R +FD+ P   V +W A++S 
Sbjct: 210 SEARELFDRMPG-----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSG 264

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLA--IILSSCAAMGILESGKQV-------HAA 429
           Y+Q+   +EA ++F  M      P+R  ++   ++++     +++  K++       + A
Sbjct: 265 YAQNGMLEEARRVFDAM------PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA 318

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
           S  T   +  Y  +G++         E A+ VF  +P+ D V W +M+A  S      E 
Sbjct: 319 SWNTM--LTGYAQAGML---------EEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
              F +M +   +  + +FA VLS+CA +++   G Q+H ++ + GY    FVG+AL+ M
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y KCG++  AR  F+ M  ++ V+WN MI GYA++G+G EA+ ++  M  +  KPDDIT 
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           V +L ACSHSGLV+ G+  F SM  D GV    +HYTCMID LGRAG   EA  L+ +MP
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547

Query: 670 CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRA 729
            + D  +W  LL + R+H N  L + AAE++F L+P+N+  Y LL+NIY+S G+W D R 
Sbjct: 548 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARK 607

Query: 730 VRELMSENCIVKDPAYS 746
           +R +M E  + K P +S
Sbjct: 608 MRVMMEERGVKKVPGFS 624



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 233/497 (46%), Gaps = 50/497 (10%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N+ I  + +      A+ LF  MP +   ++NA+L+    +  L  A  LF  +P  +  
Sbjct: 42  NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNY 101

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S+N L+ AL  +     A  ++++M     V  ++ ++S            H    HGLV
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS------------HAN--HGLV 147

Query: 147 ------IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
                   +  +K+    N +L+ Y + G  + A  +F   +E + +++ A+MSG  +  
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWG 207

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
           ++ EA E+F  M  +    D VS + ++   AR G  VE+           R      V 
Sbjct: 208 KMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEA----------RRLFDAAPVR 253

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
                     D+    +++  YA+NG ++ A  +F  +PER+ VSWN M+A Y Q+    
Sbjct: 254 ----------DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMD 303

Query: 321 KAIELLQRMKSCGFEPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
           +A EL   M  C      V S N ML    ++G ++  + +FD+MP     SW AML++Y
Sbjct: 304 EAKELFN-MMPC----RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAY 358

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           SQ    +E ++LF EM   G   +R+  A +LS+CA +  LE G Q+H   ++    +  
Sbjct: 359 SQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGC 418

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           +V + L+ +Y KC   E A   F  + E D+V WN+MIAG + +    EA   F  MR  
Sbjct: 419 FVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTT 478

Query: 500 EMYPTQFSFATVLSSCA 516
              P   +   VL++C+
Sbjct: 479 STKPDDITLVGVLAACS 495



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 195/406 (48%), Gaps = 37/406 (9%)

Query: 18  GLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEF 72
           GLF+     D    N L+  Y +      A+ LFD+MP +D+ SWN ++S   +  D+  
Sbjct: 183 GLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVE 242

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A +LFD  P R+V +W  ++S   +NG+ E+A  V++ M     V  +  +A+  +    
Sbjct: 243 ARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRR-- 300

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           ++D          +  +   +N+   N +L+ YA+ G  + A  VF+ M + + V++ AM
Sbjct: 301 MMDEAKE------LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAM 354

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           ++  ++     E L++F  M R    ++  + + VL  CA        D+ A        
Sbjct: 355 LAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCA--------DIAALE------ 400

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G Q+H   I+ G+     + N+LL MY K G+M+ A   F  + ER VVSWN MIAG
Sbjct: 401 --CGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAG 458

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SP 367
           Y +     +A+E+   M++   +PD++T + +L AC  SG ++ G   F SM      + 
Sbjct: 459 YARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTA 518

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
               +  M+    ++    EA  L ++M F   +PD T    +L +
Sbjct: 519 KPEHYTCMIDLLGRAGRLAEAHDLMKDMPF---EPDSTMWGALLGA 561



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 7/123 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH  ++R G     F+ N L+ +Y KC N   A++ F++M  +D+ SWN +++   +
Sbjct: 402 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR 461

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFV---PT 119
               + A ++FD M   +     ++   +++A   +GL EK +S +  M ++  V   P 
Sbjct: 462 HGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPE 521

Query: 120 HIT 122
           H T
Sbjct: 522 HYT 524


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 175/510 (34%), Positives = 289/510 (56%), Gaps = 19/510 (3%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV-------IFSNLPERSVVS--- 305
           G+ VH   I+LG   DL+  N+L++MY+K   ++   V       +   +PE   +    
Sbjct: 29  GESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQRFCDSKMLGGIPEPREIGKCS 88

Query: 306 --------WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR-SGDIKT 356
                    +  +AG  Q     +   +L ++ +     DE  + ++     + S  + +
Sbjct: 89  NSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGS 148

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
            R++F+ MP   + SWN ++S  +Q+  H++A+ + REM    ++PD  TL+ +L   A 
Sbjct: 149 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 208

Query: 417 MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
              L  GK++H  +++     D ++ S LI +Y+KC R + + RVF+ +P+ D + WNS+
Sbjct: 209 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 268

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
           IAG   N +  E   FF+QM   ++ P   SF++++ +CA L++   G+Q+H  I +  +
Sbjct: 269 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 328

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
             ++F+ SAL++MY KCG+I  AR  FD M   + V+W  MI GYA +G+  +A+ L+K 
Sbjct: 329 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 388

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M   GVKP+ + F+A+LTACSH+GLVD   + FNSM  D+ + P L+HY  + D LGR G
Sbjct: 389 MEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVG 448

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              EA   I +M  +    +W  LL++CR+H N+ LA++ +++LF +DP+N   Y LL+N
Sbjct: 449 RLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSN 508

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           IYS+ GRW D R +R  M +  + K PA S
Sbjct: 509 IYSAAGRWKDARKLRIAMRDKGMKKKPACS 538



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/521 (24%), Positives = 234/521 (44%), Gaps = 93/521 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSK-----------------------------CN 37
           G+ +H  I+R G+  D + CN L+ +YSK                             C+
Sbjct: 29  GESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQRFCDSKMLGGIPEPREIGKCS 88

Query: 38  NTH------------------------------SAQHLFDKMPHKDIYSWNAILSAQCKS 67
           N+H                              + + +FD+    D+YS       + +S
Sbjct: 89  NSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTYKKVFDEGKTSDVYS-----KKEKES 143

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
             L    K+F+ MP+R++VSWN +IS   +NG+ E AL +  +M N    P   TL+SV 
Sbjct: 144 YYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 203

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
                 +++  G+  HG  I+ G D ++++ ++L+ +YAKC     +  VF  + + + +
Sbjct: 204 PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGI 263

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++ ++++G  +     E L+ F+ M+   +  + VS SS++  CA               
Sbjct: 264 SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAH-------------- 309

Query: 248 NKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                 +H G+Q+H   I+  F+ ++ ++++L+DMYAK G++ +A  IF  +    +VSW
Sbjct: 310 ---LTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSW 366

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             MI GY     +  AI L +RM+  G +P+ V  + +L AC  +G +    + F+SM  
Sbjct: 367 TAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQ 426

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  + A+     +    +EA +   +M    ++P  +  + +L++C     +E
Sbjct: 427 DYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH---IEPTGSVWSTLLAACRVHKNIE 483

Query: 422 SGKQVHAASLKT-ASHIDNYVASGLIGIYSKCQRNELAERV 461
             ++V          +I  YV   L  IYS   R + A ++
Sbjct: 484 LAEKVSKKLFTVDPQNIGAYVL--LSNIYSAAGRWKDARKL 522



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/450 (22%), Positives = 189/450 (42%), Gaps = 85/450 (18%)

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M   G  P H    SV K+ T + D+  G   HG +I++G+  ++Y  NAL+++Y+K   
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSK--- 57

Query: 171 TKHAVPVFEEMSEPNEVTF--TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
                  F  + E     F  + M+ G+ +   + +                        
Sbjct: 58  -------FWSLEEGGVQRFCDSKMLGGIPEPREIGK------------------------ 86

Query: 229 GVCAREGCGVESDVFAQSDNKFS---RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
                  C    D+  + D + +   +N    Q+  +  ++     +       D+Y+K 
Sbjct: 87  -------CSNSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTYKKVFDEGKTSDVYSKK 139

Query: 286 GD----MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT- 340
                 + S   +F  +P+R +VSWN +I+G  Q      A+ +++ M +    PD  T 
Sbjct: 140 EKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTL 199

Query: 341 ---------SINMLVA------CVRSG---DIKTGREMFD----------------SMPS 366
                     +N+L         +R+G   D+  G  + D                 +P 
Sbjct: 200 SSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQ 259

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
               SWN++++   Q+    E +K F++M    +KP+  + + I+ +CA +  L  GKQ+
Sbjct: 260 HDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQL 319

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H   +++    + ++AS L+ +Y+KC     A  +F ++   D+V W +MI G +L+   
Sbjct: 320 HGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHA 379

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            +A   FK+M    + P   +F  VL++C+
Sbjct: 380 YDAISLFKRMEVEGVKPNYVAFMAVLTACS 409


>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
 gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
          Length = 623

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 198/641 (30%), Positives = 321/641 (50%), Gaps = 61/641 (9%)

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
            + T+  L   +  S +L D   GRR H  +I  GLD + Y+ N L+ +Y +CG    A 
Sbjct: 1   MIDTYEALLKQYGNSKSLAD---GRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDAR 57

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
             F  + + N  ++T ++S L +     E LE+ + M  +    + ++  S+LG C+  G
Sbjct: 58  AAFRGIHQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTG 117

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                      D        G+++H      G E D+   N+LL+MY     +D A ++F
Sbjct: 118 -----------DLSL-----GKKIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVF 161

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------- 348
             +  R VVSW ++I+ Y       +A++L +RM+     PD VT I++L AC       
Sbjct: 162 ERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLV 221

Query: 349 ---------VRSG---DIKTG----------------REMFDSMPSPSVSSWNAMLSSYS 380
                    V SG   D+  G                R++FD +    +  WNAM+ +Y+
Sbjct: 222 EGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYA 281

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH--AASLKTASHID 438
           Q+   ++A  L+ EM    ++P+  TL  +L SC++   +E G  +H  AA+    SH  
Sbjct: 282 QNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTS 341

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPE--LDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
             V + LI +Y+KC   E A RVF        +++ WN+MI   +   L++EA   + +M
Sbjct: 342 --VVNALINMYAKCGSLENATRVFIEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRM 399

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
            Q  +  +  ++ TVL+ CA       GR+VH++    G  +D+ V ++LI +Y  CG++
Sbjct: 400 NQEGIKASDVTYGTVLAVCANFGDFTTGREVHSRSLATGCCSDV-VQNSLICLYGGCGNL 458

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             A+  F+ +  KN V+W+ ++  YA+NG  D A  L+  M   GV P+ +TF ++L AC
Sbjct: 459 EAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHAC 518

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH+GL D G   F SMQ DH +EP  +HY CM++ L ++G   +A   +  MP + D   
Sbjct: 519 SHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASA 578

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
           W  LL +C +H +      AA++L   +P+NSA Y LL NI
Sbjct: 579 WRSLLGACEVHTDKEYGALAAKQLLDAEPRNSAAYVLLYNI 619



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 148/603 (24%), Positives = 261/603 (43%), Gaps = 86/603 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+   G+ +H+ ++ NGL  DT+L N L+++Y +C +   A+  F  +  ++++SW    
Sbjct: 16  KSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWTI-- 73

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                        LIS LV+NG   + L +   M  EG     I
Sbjct: 74  -----------------------------LISLLVQNGEASEGLELLKFMDLEGTEANKI 104

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  S+  A +   D+  G++ H  V   GL+ +I   NALL++Y  C     A  VFE M
Sbjct: 105 TFISLLGACSVTGDLSLGKKIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERM 164

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + V++T ++S  A     +EAL+++R M ++    D+V+L SVL  CA         
Sbjct: 165 VFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACA--------- 215

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                       V G+ +H   +  G E D+ +  +++  Y K   +D A  +F  + ++
Sbjct: 216 -------SLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQVFDRIMDK 268

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
            +V WN MI  Y Q +   KA  L   M      P++VT I +L +C             
Sbjct: 269 DIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCKMERGSSLH 328

Query: 349 ----------------------VRSGDIKTGREMF--DSMPSPSVSSWNAMLSSYSQSEN 384
                                  + G ++    +F   +  + +V +WN M+ + +Q + 
Sbjct: 329 REAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTNVITWNTMIVANAQEDL 388

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
           + EA++++  M   G+K    T   +L+ CA  G   +G++VH+ SL T    D  V + 
Sbjct: 389 NLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREVHSRSLATGCCSD-VVQNS 447

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI +Y  C   E A+  F  +   ++V W+S++A  + N  +  A   F  M Q+ + P 
Sbjct: 448 LICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPN 507

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDIYGARQFF 563
             +F +VL +C+    + +G      ++ D ++         ++ +  K G +  A  F 
Sbjct: 508 IVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFM 567

Query: 564 DMM 566
             M
Sbjct: 568 SAM 570



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 191/417 (45%), Gaps = 58/417 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK +H  I+ +G+  D F+   ++  Y KC     A+ +FD++  KDI  WNA++   
Sbjct: 221 VEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMI--- 277

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                        A  +N  EEKA ++Y +M      P  +TL 
Sbjct: 278 ----------------------------GAYAQNHCEEKAFALYLEMVENQMRPNDVTLI 309

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE- 183
           ++  + ++   +E G   H      G   +  V NAL+++YAKCG  ++A  VF E +  
Sbjct: 310 TLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNR 369

Query: 184 -PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             N +T+  M+   A+ D  +EAL+++  M ++ +    V+  +VL VCA          
Sbjct: 370 TTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCA---------- 419

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                  F     G++VH  ++  G  +D+ + NSL+ +Y   G++++A+  F ++  ++
Sbjct: 420 ------NFGDFTTGREVHSRSLATGCCSDV-VQNSLICLYGGCGNLEAAQTAFESVASKN 472

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           VVSW+ ++A Y +  +  +A  L   M   G  P+ VT  ++L AC  +G    G   F 
Sbjct: 473 VVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFL 532

Query: 363 SMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           SM       P+   +  M++  ++S   K+A      M    V+PD +    +L +C
Sbjct: 533 SMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMP---VQPDASAWRSLLGAC 586


>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
 gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
          Length = 963

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 220/749 (29%), Positives = 371/749 (49%), Gaps = 54/749 (7%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHS--AQHLFDKMPHKDIYSWNAILSAQCKS 67
           +H  + +     +T +CN LI +Y  C       AQ +FD  P +D+ +WNA++S   K 
Sbjct: 188 VHGLLSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKK 247

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            D+   + LF +M   +                     S       E    + IT  S+ 
Sbjct: 248 GDVVSTFTLFMDMQRED---------------------SRIQLRPTEHTFGSLITATSLS 286

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
             S+A+LD     +    V+K G   ++YV +AL+S +A+ G    A  +F  + E N V
Sbjct: 287 SGSSAVLD-----QVFVSVLKSGCSSDLYVGSALVSAFARHGLIDEAKDIFLSLKEKNAV 341

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           T   ++ GL K     EA+++F +  R  + +++ +   +L   A      E  +  +  
Sbjct: 342 TLNGLIVGLVKQHCSEEAVKIF-VGTRNTIVVNADTYVVLLSAIA------EYSIPEEGL 394

Query: 248 NKFSRNVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            K      G++ H   ++ G  +  + +SN L++MYAK G +DSA  IF  +     +SW
Sbjct: 395 RK------GKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQLMEATDRISW 448

Query: 307 NVMIAGYGQKYQSTKAIELLQRMK----SCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           N +I+   Q     K +   Q++       G + D   S  ++      G +    ++F+
Sbjct: 449 NTIISALDQ--NGLKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFN 506

Query: 363 SMPSPSVSSWNAMLSSYSQSENH-KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           SM      SWN+M+   + S+    E +++F  M   G+ P++ T   +L++ + + +LE
Sbjct: 507 SMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLE 566

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGL 480
            GKQ HAA LK     DN V + LI  Y+K       E +F  +    D V WNSMI+G 
Sbjct: 567 LGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGY 626

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
             N    EA      M  +       +F+ +L++CA +++  +G ++HA   +    +D+
Sbjct: 627 IYNGYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSHLESDV 686

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            V SAL++MY KCG +  A + F+ M  +N  +WN MI GYA++G G +A+  +++M+ S
Sbjct: 687 VVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLRS 746

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
              PD +TFV++L+ACSH+GLV+ G+E F  M  DHG+ P ++HY+C+ID LGRAG   +
Sbjct: 747 RESPDHVTFVSVLSACSHAGLVERGLEYFEMMP-DHGILPQIEHYSCVIDLLGRAGKIDK 805

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLH---ANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
            +  I  MP K + +IW  +L +CR     + + L + A   L  ++P+N   Y L +N 
Sbjct: 806 IKEYIQRMPMKPNALIWRTVLVACRQSKDGSKIELGREALRVLLEIEPQNPVNYVLASNF 865

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +++ G W+D    R  M +  + K+   S
Sbjct: 866 HAATGMWEDTAKARAGMRQATVKKEAGRS 894



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 195/713 (27%), Positives = 329/713 (46%), Gaps = 69/713 (9%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH  +++ GL  D FL N L+  Y+K                       A L+A      
Sbjct: 82  LHVELIKRGLNHDLFLSNHLVNSYAK----------------------GARLAA------ 113

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE---GFVPTHITLASV 126
              A ++FDEMP+RN VSW  L+S  V  G+ E+A  V+  M  E   G  PT  T  ++
Sbjct: 114 ---ASRVFDEMPQRNAVSWTCLLSGYVLQGITEEAFRVFRAMLREVEPGCRPTSFTFGTL 170

Query: 127 FKA--STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC--GWTKHAVPVFEEMS 182
            +A        +    + HGL+ K     N  V NAL+S+Y  C  G    A  VF+   
Sbjct: 171 LRACQDGGPDRLGFATQVHGLLSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTP 230

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + +T+ A+MS  AK   VV    +F  M R+   I         G          S +
Sbjct: 231 IRDLITWNALMSVYAKKGDVVSTFTLFMDMQREDSRIQLRPTEHTFG----------SLI 280

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
            A S +  S  V   QV    +K G  +DL++ ++L+  +A++G +D A+ IF +L E++
Sbjct: 281 TATSLSSGSSAVL-DQVFVSVLKSGCSSDLYVGSALVSAFARHGLIDEAKDIFLSLKEKN 339

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------VRSGD 353
            V+ N +I G  +++ S +A+++    ++     +  T + +L A          +R G 
Sbjct: 340 AVTLNGLIVGLVKQHCSEEAVKIFVGTRNT-IVVNADTYVVLLSAIAEYSIPEEGLRKGK 398

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
              G  +   +    ++  N +++ Y++      A K+F+ M+      DR +   I+S+
Sbjct: 399 EAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQLME----ATDRISWNTIISA 454

Query: 414 CAAMG--ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
               G  +L +G+QVH  ++K    +D  V++ L+ +Y +C       +VF+ + + D V
Sbjct: 455 LDQNGLKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEV 514

Query: 472 CWNSMIAGLSLNSLDI-EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
            WNSM+  ++ +   I E    F  M +  + P + +F  +L++ + LS    G+Q HA 
Sbjct: 515 SWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAA 574

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG-KNTVTWNEMIHGYAQNGYGDE 589
           + K G ++D  V +ALI  Y K GD+      F  M G ++ V+WN MI GY  NGY  E
Sbjct: 575 VLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQE 634

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+     M+ SG   D  TF  IL AC+    ++ G+E+ ++  +   +E  +   + ++
Sbjct: 635 AMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEM-HAFGIRSHLESDVVVESALV 693

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           D   + G    A  L + M  +++   W  ++S    H   R A    EE+ R
Sbjct: 694 DMYSKCGRVDYASKLFNSMTQRNE-FSWNSMISGYARHGLGRKALETFEEMLR 745



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 211/452 (46%), Gaps = 63/452 (13%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA-- 63
           GK  H H+LR GL D    + N L+ +Y+KC    SA  +F  M   D  SWN I+SA  
Sbjct: 397 GKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQLMEATDRISWNTIISALD 456

Query: 64  -----------QCKSDDLEFA------------------------YKLFDEMPERNVVSW 88
                      Q   D +++                         +K+F+ M + + VSW
Sbjct: 457 QNGLKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSW 516

Query: 89  NNLISALVRNGLE-EKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           N+++  +  +     + + V+N M   G +P  +T  ++  A + L  +E G++ H  V+
Sbjct: 517 NSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVL 576

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EPNEVTFTAMMSGLAKTDRVVEAL 206
           K G+  +  V NAL+S YAK G       +F  MS   + V++ +M+SG      + EA+
Sbjct: 577 KHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAM 636

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
           +   LM+     +D  + S +L  CA             S     R   G ++H   I+ 
Sbjct: 637 DCVWLMLHSGQIMDCCTFSIILNACA-------------SVAALER---GMEMHAFGIRS 680

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
             E+D+ + ++L+DMY+K G +D A  +F+++ +R+  SWN MI+GY +     KA+E  
Sbjct: 681 HLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKALETF 740

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS----PSVSSWNAMLSSYSQS 382
           + M      PD VT +++L AC  +G ++ G E F+ MP     P +  ++ ++    ++
Sbjct: 741 EEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRA 800

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               +  K+   +Q   +KP+      +L +C
Sbjct: 801 ---GKIDKIKEYIQRMPMKPNALIWRTVLVAC 829



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 184/438 (42%), Gaps = 64/438 (14%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY--- 313
           + +H   IK G   DL LSN L++ YAK   + +A  +F  +P+R+ VSW  +++GY   
Sbjct: 80  ENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQ 139

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG---------------- 357
           G   ++ +    + R    G  P   T   +L AC   G  + G                
Sbjct: 140 GITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYAS 199

Query: 358 -----------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                  + +FD  P   + +WNA++S Y++  +      LF +
Sbjct: 200 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMD 259

Query: 395 MQFRG----VKPDRTTLAIILSSCAAMGILESGK-----QVHAASLKTASHIDNYVASGL 445
           MQ       ++P   T   ++++ +    L SG      QV  + LK+    D YV S L
Sbjct: 260 MQREDSRIQLRPTEHTFGSLITATS----LSSGSSAVLDQVFVSVLKSGCSSDLYVGSAL 315

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           +  +++    + A+ +F  + E + V  N +I GL       EA   F   R N +    
Sbjct: 316 VSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTR-NTIVVNA 374

Query: 506 FSFATVLSSCAKLS----SSFQGRQVHAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGAR 560
            ++  +LS+ A+ S       +G++ H  + + G  +  I V + L+ MY KCG I  A 
Sbjct: 375 DTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSAS 434

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYG--DEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           + F +M   + ++WN +I    QNG        +++ D +  G+  D      ++     
Sbjct: 435 KIFQLMEATDRISWNTIISALDQNGLKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGE 494

Query: 619 SGLVDVGVEIFNSMQLDH 636
            G +    ++FNSM  DH
Sbjct: 495 CGAMSDCWKVFNSMA-DH 511



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 13/253 (5%)

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           S + +H   +K   + D ++++ L+  Y+K  R   A RVF  +P+ + V W  +++G  
Sbjct: 78  SPENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYV 137

Query: 482 LNSLDIEAFMFFKQM-RQNE--MYPTQFSFATVLSSCAKLSSSFQG--RQVHAQIEKDGY 536
           L  +  EAF  F+ M R+ E    PT F+F T+L +C        G   QVH  + K  Y
Sbjct: 138 LQGITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEY 197

Query: 537 VNDIFVGSALIEMY--CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
            ++  V +ALI MY  C  G    A++ FD    ++ +TWN ++  YA+ G       L+
Sbjct: 198 ASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLF 257

Query: 595 KDMIASG----VKPDDITFVAILTACS-HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
            DM        ++P + TF +++TA S  SG   V  ++F S+ L  G    L   + ++
Sbjct: 258 MDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSV-LKSGCSSDLYVGSALV 316

Query: 650 DCLGRAGHFHEAE 662
               R G   EA+
Sbjct: 317 SAFARHGLIDEAK 329


>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 220/748 (29%), Positives = 361/748 (48%), Gaps = 105/748 (14%)

Query: 72  FAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
           F YKL  +  + +       +S L  NGL  +A++  + +S  G   +  T  ++ +   
Sbjct: 39  FTYKLTSKFNDDH-------LSYLCSNGLLREAITAIDSISKRGSKLSTNTYINLLQTCI 91

Query: 132 ALLDVEHGRRCH---GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
            +  +E GR  H   GLV ++    N +V   L+S+YAKCG  K A  VF+ M E N  T
Sbjct: 92  DVGSIELGRELHVRMGLVHRV----NPFVETKLVSMYAKCGCLKDARKVFDGMQERNLYT 147

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           ++AM+   ++  R  E +E+F LM+   V  D+     +L     + CG   D+      
Sbjct: 148 WSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKIL-----QACGNCEDLETV--- 199

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                   + +H L I+ G    + LSNS+L  + K G +  A   F N+ ER  VSWNV
Sbjct: 200 --------KLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNV 251

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD----IKTGREMFDSM 364
           MIAGY QK    +A  LL  M + GF+P  VT   M+ +  + GD    I   ++M    
Sbjct: 252 MIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVG 311

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
            +P V +W +M+S +SQS    +A+  F++M   GV+P+  T+A   S+CA++  L++G 
Sbjct: 312 LAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGL 371

Query: 425 QVHAASLK------------------------TASHI-------DNYVASGLIGIYSKCQ 453
           ++H  ++K                         A H+       D Y  + +IG Y +  
Sbjct: 372 EIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAG 431

Query: 454 RNELAERVFHRIPE----LDIVCWNSMIAGL---------------------------SL 482
               A  +F R+ E     ++V WN+MI+G                            S 
Sbjct: 432 YGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASW 491

Query: 483 NSL---------DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           NSL           +A   F+QM+     P   +  ++L +CA + +  + +++H  + +
Sbjct: 492 NSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLR 551

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
               +++ V ++L++ Y K G+I  +R  F+ M  K+ +TWN +I GY  +G  D A +L
Sbjct: 552 RNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQL 611

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +  M   G++P+  T  +I+ A   +G+VD G  +F+S+  +H + P LDHY  M+D  G
Sbjct: 612 FDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYG 671

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           R+G   +A   I++MP + D  IW  LL++CR H N+ LA  AA+ L  L+P N   Y L
Sbjct: 672 RSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRL 731

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVK 741
           L   Y+  G+++    VR+L  E+ + K
Sbjct: 732 LVQAYALYGKFEQTLKVRKLGKESAMKK 759



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 160/681 (23%), Positives = 294/681 (43%), Gaps = 128/681 (18%)

Query: 7   GKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           G+ LH   +R GL    + F+  +L+ +Y+KC     A+ +FD M  +++Y+W+A++ A 
Sbjct: 99  GRELH---VRMGLVHRVNPFVETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAY 155

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +                     W  ++              ++  M  +G +P      
Sbjct: 156 SREQ------------------RWKEVV-------------ELFFLMMGDGVLPDAFLFP 184

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            + +A     D+E  +  H LVI+ GL   + ++N++L+ + KCG    A   F  M E 
Sbjct: 185 KILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDER 244

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS------SVLGVC------- 231
           + V++  M++G  +     EA  +   M  +      V+ +      S LG C       
Sbjct: 245 DGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLK 304

Query: 232 -AREGCGVESDVF---------------AQSDNKFSRNV--------------------- 254
              E  G+  DV+               +Q+ + F + +                     
Sbjct: 305 KKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASL 364

Query: 255 ----HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
               +G ++HC  IK+G   +  + NSL+DMY+K G +++A  +F  + E+ V +WN MI
Sbjct: 365 KSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMI 424

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSP--- 367
            GY Q     KA EL  R++     P+ VT   M+  C+++GD     ++F  M      
Sbjct: 425 GGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGV 484

Query: 368 --SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
             + +SWN++++ Y Q     +A+ +FR+MQ     P+  T+  IL +CA +   +  K+
Sbjct: 485 KRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKE 544

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +H   L+     +  VA+ L+  Y+K    + +  VF+ +   DI+ WNS+IAG  L+  
Sbjct: 545 IHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGC 604

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
              AF  F QMR   + P + + A+++ +        +GR V + I ++  +        
Sbjct: 605 SDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQI------LP 658

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
            ++ Y    D+YG                        ++G   +A+   +DM    ++PD
Sbjct: 659 TLDHYLAMVDLYG------------------------RSGRLADAIEFIEDM---PIEPD 691

Query: 606 DITFVAILTACSHSGLVDVGV 626
              + ++LTAC   G +++ V
Sbjct: 692 VSIWTSLLTACRFHGNLNLAV 712



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/539 (23%), Positives = 232/539 (43%), Gaps = 138/539 (25%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           KL+H+ ++R GL     L N ++  + KC     A+  F  M  +D  SWN +++  C+ 
Sbjct: 200 KLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQK 259

Query: 68  DDLEFAYKLFDEMPER---------------------------------------NVVSW 88
            + + A +L D M  +                                       +V +W
Sbjct: 260 GNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTW 319

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
            ++IS   ++    +AL  + KM   G  P  IT+AS   A  +L  +++G   H   IK
Sbjct: 320 TSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIK 379

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE------------------------- 183
           +G+ +   V N+L+ +Y+KCG  + A  VF+ + E                         
Sbjct: 380 MGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYEL 439

Query: 184 ----------PNEVTFTAMMSGLAKTDRVVEALEMFRLMIR------------------- 214
                     PN VT+ AM+SG  +     +A+++F++M +                   
Sbjct: 440 FMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYH 499

Query: 215 ------KAVSI-----------DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
                 KA++I           +SV++ S+L  CA        +V A+   K        
Sbjct: 500 QLGEKNKALAIFRQMQSLNFSPNSVTILSILPACA--------NVMAEKKIK-------- 543

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           ++H   ++   E++L ++NSL+D YAK+G++  +  +F+ +  + +++WN +IAGY    
Sbjct: 544 EIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHG 603

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSW 372
            S  A +L  +M++ G  P+  T  +++ A   +G +  GR +F S+       P++  +
Sbjct: 604 CSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHY 663

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE----SGKQVH 427
            AM+  Y +S    +AI+   +M    ++PD +    +L++C   G L     + K++H
Sbjct: 664 LAMVDLYGRSGRLADAIEFIEDMP---IEPDVSIWTSLLTACRFHGNLNLAVLAAKRLH 719



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 172/381 (45%), Gaps = 58/381 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H   ++ G+  +T + N LI++YSKC    +A+H+FD +  KD+Y+WN+++   C+
Sbjct: 370 GLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQ 429

Query: 67  SDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEE-------------------- 102
           +     AY+LF  + E     NVV+WN +IS  ++NG E+                    
Sbjct: 430 AGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTA 489

Query: 103 ----------------KALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
                           KAL+++ +M +  F P  +T+ S+  A   ++  +  +  HG V
Sbjct: 490 SWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCV 549

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           ++  L+  + VAN+L+  YAK G  K++  VF  MS  + +T+ ++++G         A 
Sbjct: 550 LRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAF 609

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
           ++F  M    +  +  +L+S++      G      +  +  + FS      Q+       
Sbjct: 610 QLFDQMRNLGIRPNRGTLASIIHAYGIAG------MVDKGRHVFSSITEEHQILP----- 658

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVSWNVMIAGYGQKYQSTKAIEL 325
               D +L  +++D+Y ++G +  A     ++P E  V  W  ++     ++     + +
Sbjct: 659 --TLDHYL--AMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTAC--RFHGNLNLAV 712

Query: 326 LQRMKSCGFEPDEVTSINMLV 346
           L   +    EPD      +LV
Sbjct: 713 LAAKRLHELEPDNHVIYRLLV 733


>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Glycine max]
          Length = 703

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 203/644 (31%), Positives = 321/644 (49%), Gaps = 58/644 (9%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H   IK+G   + Y AN L++ YAKC     A  VF+EM   + V++ A++S  A +  +
Sbjct: 16  HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
               ++   M R   + DS +  S+L   A  G                +   GQQ+H +
Sbjct: 76  DTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVG----------------KLKLGQQLHSV 119

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            +K+G   ++   ++LLDMYAK G +D   V+F ++PER+ VSWN ++A Y +      A
Sbjct: 120 MLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMA 179

Query: 323 IELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGDIKTGREMFDSMPSPSVS- 370
             +L  M+  G E D+ T   +L              +    +K G E+F+++ + +++ 
Sbjct: 180 FWVLSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITA 239

Query: 371 ------------------------SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
                                   +WN+ML +Y   E    A K+F +MQ  G +PD  T
Sbjct: 240 YSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYT 299

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY----SKCQRNELAERVF 462
              I+ +C+       GK +H   +K        V++ LI +Y     +C  + L  R+F
Sbjct: 300 YTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDAL--RIF 357

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             +   D   WNS++AG     L  +A   F QMR   +    ++F+ V+ SC+ L++  
Sbjct: 358 FSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQ 417

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G+Q H    K G+  + +VGS+LI MY KCG I  AR+ F+     N + WN +I GYA
Sbjct: 418 LGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYA 477

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
           Q+G G+ A+ L+  M    VK D ITFVA+LTACSH+GLV+ G     SM+ D G+ P  
Sbjct: 478 QHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQ 537

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           +HY C ID  GRAGH  +A  L++ MP + D ++ + LL +CR   ++ LA + A+ L  
Sbjct: 538 EHYACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAKILLE 597

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L+P+    Y +L+ +Y     W +  +V  +M E  + K P +S
Sbjct: 598 LEPEEHCTYVILSEMYGRFKMWGEKASVTRMMRERGVKKVPGWS 641



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/544 (25%), Positives = 243/544 (44%), Gaps = 85/544 (15%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           H   ++ G   D +  N LI  Y+KC   +SA  +FD+MPH+D  SWNAI+SA   S DL
Sbjct: 16  HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
           +  ++L   M                             + S   F     T  S+ K  
Sbjct: 76  DTTWQLLGAM-----------------------------RRSTHAFDSR--TFGSILKGV 104

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
             +  ++ G++ H +++K+GL +N++  +ALL +YAKCG       VF+ M E N V++ 
Sbjct: 105 AYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWN 164

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
            +++  ++      A  +   M  + V ID  ++S +L +                DN  
Sbjct: 165 TLVASYSRVGDCDMAFWVLSCMELEGVEIDDGTVSPLLTLL---------------DNAM 209

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN-LPERSVVSWNVM 309
              +   Q+HC  +K G E    + N+ +  Y++   +  AE +F   +  R +V+WN M
Sbjct: 210 FYKL-TMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSM 268

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------- 348
           +  Y    +   A ++   M++ GFEPD  T   ++ AC                     
Sbjct: 269 LGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGL 328

Query: 349 --------------VRSGD--IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                         +R  D  ++    +F SM      +WN++L+ Y Q    ++A++LF
Sbjct: 329 DNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLF 388

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
            +M+   ++ D  T + ++ SC+ +  L+ G+Q H  +LK     ++YV S LI +YSKC
Sbjct: 389 LQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKC 448

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              E A + F    + + + WNS+I G + +     A   F  M++ ++     +F  VL
Sbjct: 449 GIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVL 508

Query: 513 SSCA 516
           ++C+
Sbjct: 509 TACS 512



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 195/424 (45%), Gaps = 56/424 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH  I+++GL     +CN  I  YS+C +   A+ +FD           A+L        
Sbjct: 217 LHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFD----------GAVLC------- 259

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                        R++V+WN+++ A + +  E+ A  V+  M N GF P   T   +  A
Sbjct: 260 -------------RDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGA 306

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG--WTKHAVPVFEEMSEPNEV 187
            +       G+  HGLVIK GLD ++ V+NAL+S+Y +      + A+ +F  M   +  
Sbjct: 307 CSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCC 366

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           T+ ++++G  +     +AL +F  M    + ID  + S+V+  C+               
Sbjct: 367 TWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCS--------------- 411

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
              +    GQQ H L +K+GF+ + ++ +SL+ MY+K G ++ A   F    + + + WN
Sbjct: 412 -DLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWN 470

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS- 366
            +I GY Q  Q   A++L   MK    + D +T + +L AC  +G ++ G    +SM S 
Sbjct: 471 SIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESD 530

Query: 367 ----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
               P    +   +  Y ++ + K+A  L   M F   +PD   L  +L +C   G +E 
Sbjct: 531 FGIPPRQEHYACAIDLYGRAGHLKKATALVETMPF---EPDAMVLKTLLGACRFCGDIEL 587

Query: 423 GKQV 426
             Q+
Sbjct: 588 ASQI 591



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/458 (22%), Positives = 198/458 (43%), Gaps = 91/458 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH+ +L+ GL ++ F  + L+++Y+KC        +F  MP ++  SWN ++++  +
Sbjct: 113 GQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSR 172

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL--- 123
             D + A+             W  ++S +   G+E           ++G V   +TL   
Sbjct: 173 VGDCDMAF-------------W--VLSCMELEGVE----------IDDGTVSPLLTLLDN 207

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A  +K +  L         H  ++K GL+    V NA ++ Y++C   + A  VF+    
Sbjct: 208 AMFYKLTMQL---------HCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDGAVL 258

Query: 184 PNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + VT+ +M+      ++   A ++F  M       D+ + + ++G C+ +        
Sbjct: 259 CRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQ-------- 310

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD--MDSAEVIFSNLPE 300
                        G+ +H L IK G +  + +SN+L+ MY +  D  M+ A  IF ++  
Sbjct: 311 --------EHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDL 362

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRM----------------KSC------------ 332
           +   +WN ++AGY Q   S  A+ L  +M                +SC            
Sbjct: 363 KDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQF 422

Query: 333 -------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                  GF+ +     +++    + G I+  R+ F++    +   WN+++  Y+Q    
Sbjct: 423 HVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQG 482

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
             A+ LF  M+ R VK D  T   +L++C+  G++E G
Sbjct: 483 NIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEG 520



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 168/399 (42%), Gaps = 83/399 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH  +++ GL +   + N LI +Y + N+                         +C 
Sbjct: 316 GKCLHGLVIKRGLDNSVPVSNALISMYIRFND-------------------------RCM 350

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D    A ++F  M  ++  +WN++++  V+ GL E AL ++ +M        H T ++V
Sbjct: 351 ED----ALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAV 406

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            ++ + L  ++ G++ H L +K+G D N YV ++L+ +Y+KCG  + A   FE  S+ N 
Sbjct: 407 IRSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNA 466

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           + + +++ G A+  +   AL++F +M  + V +D ++  +VL  C+  G   E   F +S
Sbjct: 467 IVWNSIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIES 526

Query: 247 -DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            ++ F      +   C                 +D+Y + G +  A  +   +P      
Sbjct: 527 MESDFGIPPRQEHYAC----------------AIDLYGRAGHLKKATALVETMP------ 564

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM- 364
                                       FEPD +    +L AC   GDI+   ++   + 
Sbjct: 565 ----------------------------FEPDAMVLKTLLGACRFCGDIELASQIAKILL 596

Query: 365 -PSPSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGVK 401
              P       +LS  Y + +   E   + R M+ RGVK
Sbjct: 597 ELEPEEHCTYVILSEMYGRFKMWGEKASVTRMMRERGVK 635


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 191/654 (29%), Positives = 326/654 (49%), Gaps = 62/654 (9%)

Query: 137 EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
            H    H  +++     ++++ N LL+ Y + G   HA  + +EM   N V+F  ++   
Sbjct: 31  RHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAY 88

Query: 197 AKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
           ++  +   +LE F    R A V  D  + ++ L  C+R G                R   
Sbjct: 89  SRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAG----------------RLRE 132

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY-- 313
           G+ VH L++  G    + +SNSL+ MYA+ GDM  A  +F    ER  VSWN +++GY  
Sbjct: 133 GKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVR 192

Query: 314 -GQKYQSTKAIELLQR-------------MKSC---------------------GFEPDE 338
            G +    +   +++R             +K C                     GF+ D 
Sbjct: 193 AGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDV 252

Query: 339 VTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH------KEAIKLF 392
             +  M+    + G +     +F S+  P+V  +NAM++   + E        +EA+ L+
Sbjct: 253 FLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLY 312

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
            E+Q RG++P   T + ++ +C   G +E GKQ+H   LK     D+++ S LI +Y   
Sbjct: 313 SEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNS 372

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              E   R F  +P+ D+V W +MI+G   N L   A   F ++    + P  F+ ++V+
Sbjct: 373 GCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVM 432

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           ++CA L+ +  G Q+     K G+     +G++ I MY + GD++ A + F  M   + V
Sbjct: 433 NACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIV 492

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
           +W+ +I  +AQ+G   +A+R + +M+ + V P++ITF+ +LTACSH GLVD G++ + +M
Sbjct: 493 SWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETM 552

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
           + ++ + P + H TC++D LGRAG   +AE  I +    D+PVIW  LL+SCR+H ++  
Sbjct: 553 KEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMER 612

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            +  A+ +  L P +SA Y  L NIY   G       +R++M E  + K+P  S
Sbjct: 613 GQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLS 666



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 153/625 (24%), Positives = 299/625 (47%), Gaps = 70/625 (11%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
           H+    P   ++  N +L+A C+      A +L DEMP  N VS+N LI A  R G  E 
Sbjct: 39  HIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNAVSFNLLIDAYSRAGQPEA 96

Query: 104 ALSVYNKMS-NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALL 162
           +L  + +   + G      T A+   A +    +  G+  H L +  G+   ++V+N+L+
Sbjct: 97  SLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLV 156

Query: 163 SLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
           S+YA+CG    A  VF+   E ++V++ A++SG  +     + L +F +M R  + ++S 
Sbjct: 157 SMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSF 216

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
           +L SV+  CA    G +  V        +  VHG       +K GF++D+ L+++++ MY
Sbjct: 217 ALGSVIKCCA----GSDDPVM-----DIAAAVHG-----CVVKAGFDSDVFLASAMVGMY 262

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST------KAIELLQRMKSCGFEP 336
           AK G +  A  +F ++ + +VV +N MIAG  +   +       +A+ L   ++S G EP
Sbjct: 263 AKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEP 322

Query: 337 DEVTSINMLVACVRSGDIKTGREM-----------------------------------F 361
            E T  +++ AC  +GDI+ G+++                                   F
Sbjct: 323 TEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCF 382

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
            S+P   V +W AM+S   Q+E  + A+ LF E+   G+KPD  T++ ++++CA++ +  
Sbjct: 383 TSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVAR 442

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           +G+Q+   + K+       + +  I +Y++      A R F  +   DIV W+++I+  +
Sbjct: 443 TGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHA 502

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN-DI 540
            +    +A  FF +M   ++ P + +F  VL++C+      +G + +  ++++  ++  I
Sbjct: 503 QHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTI 562

Query: 541 FVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
              + ++++  + G +  A  F  D +     V W  ++           + R+++DM  
Sbjct: 563 KHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLL----------ASCRIHRDMER 612

Query: 600 SGVKPDDITFVAILTACSHSGLVDV 624
             +  D I  +   ++ S+  L ++
Sbjct: 613 GQLVADRIMELQPSSSASYVNLYNI 637



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 232/525 (44%), Gaps = 108/525 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA  +  G+    F+ N L+ +Y++C +   A+ +FD    +D  SWNA       
Sbjct: 133 GKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNA------- 185

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   L+S  VR G ++  L V+  M   G       L SV
Sbjct: 186 ------------------------LVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSV 221

Query: 127 FKASTALLD--VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            K      D  ++     HG V+K G D ++++A+A++ +YAK G    AV +F+ + +P
Sbjct: 222 IKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDP 281

Query: 185 NEVTFTAMMSGLAK------TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           N V F AM++GL +      TD + EAL ++  +  + +     + SSV+  C   G   
Sbjct: 282 NVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAG--- 338

Query: 239 ESDVFAQSDNKFSRNVHGQQV-HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                   D +F + +HGQ + HC      F+ D  + ++L+D+Y  +G M+     F++
Sbjct: 339 --------DIEFGKQIHGQVLKHC------FQGDDFIGSALIDLYLNSGCMEDGFRCFTS 384

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
           +P++ VV+W  MI+G  Q     +A+ L   +   G +PD  T  +++ AC         
Sbjct: 385 VPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTG 444

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      RSGD+      F  M S  + SW+A++SS++Q 
Sbjct: 445 EQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQH 504

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG-------KQVHAASLKTAS 435
              ++A++ F EM    V P+  T   +L++C+  G+++ G       K+ +A S  T  
Sbjct: 505 GCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALS-PTIK 563

Query: 436 HIDNYVASGLIGIYSKCQRNE--LAERVFHRIPELDIVCWNSMIA 478
           H    V   L+G   +    E  + + +FH  P    V W S++A
Sbjct: 564 HCTCVV--DLLGRAGRLADAEAFIRDSIFHDEP----VIWRSLLA 602



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 211/447 (47%), Gaps = 42/447 (9%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRN------GLEEKALS 106
           D++  +A++    K   L  A  LF  + + NVV +N +I+ L R+       +  +ALS
Sbjct: 251 DVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALS 310

Query: 107 VYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYA 166
           +Y+++ + G  PT  T +SV +A     D+E G++ HG V+K     + ++ +AL+ LY 
Sbjct: 311 LYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYL 370

Query: 167 KCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS 226
             G  +     F  + + + VT+TAM+SG  + +    AL +F  ++   +  D  ++SS
Sbjct: 371 NSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISS 430

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           V+  CA       S   A++         G+Q+ C   K GF     + NS + MYA++G
Sbjct: 431 VMNACA-------SLAVART---------GEQIQCFATKSGFGRFTAMGNSCIHMYARSG 474

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
           D+ +A   F  +    +VSW+ +I+ + Q   +  A+     M      P+E+T + +L 
Sbjct: 475 DVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLT 534

Query: 347 ACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           AC   G +  G + +++M      SP++     ++    ++    +A    R+  F    
Sbjct: 535 ACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFH--- 591

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLK-----TASHI---DNYVASGLIGIYSKCQ 453
            +      +L+SC     +E G+ V    ++     +AS++   + Y+ +G + + SK  
Sbjct: 592 DEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKI- 650

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGL 480
           R+ + ER   + P L    W  + +G+
Sbjct: 651 RDVMKERGVKKEPGLS---WIELRSGV 674


>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 1463

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 220/748 (29%), Positives = 361/748 (48%), Gaps = 105/748 (14%)

Query: 72  FAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
           F YKL  +  + +       +S L  NGL  +A++  + +S  G   +  T  ++ +   
Sbjct: 39  FTYKLTSKFNDDH-------LSYLCSNGLLREAITAIDSISKRGSKLSTNTYINLLQTCI 91

Query: 132 ALLDVEHGRRCH---GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
            +  +E GR  H   GLV ++    N +V   L+S+YAKCG  K A  VF+ M E N  T
Sbjct: 92  DVGSIELGRELHVRMGLVHRV----NPFVETKLVSMYAKCGCLKDARKVFDGMQERNLYT 147

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           ++AM+   ++  R  E +E+F LM+   V  D+     +L     + CG   D+      
Sbjct: 148 WSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKIL-----QACGNCEDLETV--- 199

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                   + +H L I+ G    + LSNS+L  + K G +  A   F N+ ER  VSWNV
Sbjct: 200 --------KLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNV 251

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD----IKTGREMFDSM 364
           MIAGY QK    +A  LL  M + GF+P  VT   M+ +  + GD    I   ++M    
Sbjct: 252 MIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVG 311

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
            +P V +W +M+S +SQS    +A+  F++M   GV+P+  T+A   S+CA++  L++G 
Sbjct: 312 LAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGL 371

Query: 425 QVHAASLK------------------------TASHI-------DNYVASGLIGIYSKCQ 453
           ++H  ++K                         A H+       D Y  + +IG Y +  
Sbjct: 372 EIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAG 431

Query: 454 RNELAERVFHRIPE----LDIVCWNSMIAG---------------------------LSL 482
               A  +F R+ E     ++V WN+MI+G                            S 
Sbjct: 432 YGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASW 491

Query: 483 NSL---------DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           NSL           +A   F+QM+     P   +  ++L +CA + +  + +++H  + +
Sbjct: 492 NSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLR 551

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
               +++ V ++L++ Y K G+I  +R  F+ M  K+ +TWN +I GY  +G  D A +L
Sbjct: 552 RNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQL 611

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +  M   G++P+  T  +I+ A   +G+VD G  +F+S+  +H + P LDHY  M+D  G
Sbjct: 612 FDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYG 671

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           R+G   +A   I++MP + D  IW  LL++CR H N+ LA  AA+ L  L+P N   Y L
Sbjct: 672 RSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRL 731

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVK 741
           L   Y+  G+++    VR+L  E+ + K
Sbjct: 732 LVQAYALYGKFEQTLKVRKLGKESAMKK 759



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 160/681 (23%), Positives = 294/681 (43%), Gaps = 128/681 (18%)

Query: 7   GKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           G+ LH   +R GL    + F+  +L+ +Y+KC     A+ +FD M  +++Y+W+A++ A 
Sbjct: 99  GRELH---VRMGLVHRVNPFVETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAY 155

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +                     W  ++              ++  M  +G +P      
Sbjct: 156 SREQ------------------RWKEVV-------------ELFFLMMGDGVLPDAFLFP 184

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            + +A     D+E  +  H LVI+ GL   + ++N++L+ + KCG    A   F  M E 
Sbjct: 185 KILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDER 244

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS------SVLGVC------- 231
           + V++  M++G  +     EA  +   M  +      V+ +      S LG C       
Sbjct: 245 DGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLK 304

Query: 232 -AREGCGVESDVF---------------AQSDNKFSRNV--------------------- 254
              E  G+  DV+               +Q+ + F + +                     
Sbjct: 305 KKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASL 364

Query: 255 ----HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
               +G ++HC  IK+G   +  + NSL+DMY+K G +++A  +F  + E+ V +WN MI
Sbjct: 365 KSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMI 424

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSP--- 367
            GY Q     KA EL  R++     P+ VT   M+  C+++GD     ++F  M      
Sbjct: 425 GGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGV 484

Query: 368 --SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
             + +SWN++++ Y Q     +A+ +FR+MQ     P+  T+  IL +CA +   +  K+
Sbjct: 485 KRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKE 544

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +H   L+     +  VA+ L+  Y+K    + +  VF+ +   DI+ WNS+IAG  L+  
Sbjct: 545 IHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGC 604

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
              AF  F QMR   + P + + A+++ +        +GR V + I ++  +        
Sbjct: 605 SDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQI------LP 658

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
            ++ Y    D+YG                        ++G   +A+   +DM    ++PD
Sbjct: 659 TLDHYLAMVDLYG------------------------RSGRLADAIEFIEDM---PIEPD 691

Query: 606 DITFVAILTACSHSGLVDVGV 626
              + ++LTAC   G +++ V
Sbjct: 692 VSIWTSLLTACRFHGNLNLAV 712



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 172/381 (45%), Gaps = 58/381 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H   ++ G+  +T + N LI++YSKC    +A+H+FD +  KD+Y+WN+++   C+
Sbjct: 370 GLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQ 429

Query: 67  SDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEE-------------------- 102
           +     AY+LF  + E     NVV+WN +IS  ++NG E+                    
Sbjct: 430 AGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTA 489

Query: 103 ----------------KALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
                           KAL+++ +M +  F P  +T+ S+  A   ++  +  +  HG V
Sbjct: 490 SWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCV 549

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           ++  L+  + VAN+L+  YAK G  K++  VF  MS  + +T+ ++++G         A 
Sbjct: 550 LRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAF 609

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
           ++F  M    +  +  +L+S++      G      +  +  + FS      Q+       
Sbjct: 610 QLFDQMRNLGIRPNRGTLASIIHAYGIAG------MVDKGRHVFSSITEEHQILP----- 658

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVSWNVMIAGYGQKYQSTKAIEL 325
               D +L  +++D+Y ++G +  A     ++P E  V  W  ++     ++     + +
Sbjct: 659 --TLDHYL--AMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTAC--RFHGNLNLAV 712

Query: 326 LQRMKSCGFEPDEVTSINMLV 346
           L   +    EPD      +LV
Sbjct: 713 LAAKRLHELEPDNHVIYRLLV 733


>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 200/666 (30%), Positives = 327/666 (49%), Gaps = 71/666 (10%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P H +   +    T   D++ G+  H  +++ G   ++Y+ N+L++LYAKCG    A  V
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEA--LEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           FE ++  + V++  +++G ++   V  +  +E+F+ M  +    +  + S V    +   
Sbjct: 68  FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS--- 124

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                     S   F     G Q H L IK     D+ + +SL++MY K G M  A  +F
Sbjct: 125 ---------SSPETFG----GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVF 171

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
             +PER+ VSW  +I+GY  +  + +A EL   M+      D+    ++L A      + 
Sbjct: 172 DTIPERNTVSWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVH 231

Query: 356 TGREMF-----------------------------DSMPSPSVS------SWNAMLSSYS 380
            G+++                              D+  +  +S      +W+AM++ Y+
Sbjct: 232 YGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYA 291

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           Q+ +  EA+ LF  M   G KP   T   ++++C+ +G LE GKQ+H  SLK       Y
Sbjct: 292 QAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIY 351

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
              G   + +KC     A + F  + E DIV W S                   +M+   
Sbjct: 352 FRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTSC------------------RMQMER 393

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           + P + + A+VL +C+ L++  QG+Q+HAQ  K G+  ++ +GSAL  MY KCG +    
Sbjct: 394 IMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGN 453

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
             F  M  ++ +TWN MI G +QNG G +A+ L++++     KPD +TFV +L+ACSH G
Sbjct: 454 LVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMG 513

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           LV+ G   F  M  + G+ P ++HY CM+D L RAG  HE +  I+         +W +L
Sbjct: 514 LVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRIL 573

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           L +CR + N  L   A E+L  L  + S+ Y LL++IY++LGR DD+  VR LM    + 
Sbjct: 574 LGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVN 633

Query: 741 KDPAYS 746
           K+P  S
Sbjct: 634 KEPGCS 639



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/594 (24%), Positives = 270/594 (45%), Gaps = 99/594 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA +LR G F   +L N L+ LY+KC +   A+ +F+ + +KD+ SWN +++   +
Sbjct: 29  GKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQ 88

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              + +++                              + ++ +M  E  +P   T + V
Sbjct: 89  KGTVGYSF-----------------------------VMELFQRMRAENTLPNGHTFSGV 119

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F A+++  +   G + H L IK     +++V ++L+++Y K G    A  VF+ + E N 
Sbjct: 120 FTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNT 179

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  ++SG A      EA E+F LM R+  + D    +SVL         V   V    
Sbjct: 180 VSWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALT-----VPDLVH--- 231

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   +G+Q+HCL +K G  +   + N+L+ MY K G +D A   F    ++  ++W
Sbjct: 232 --------YGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITW 283

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           + MI GY Q   S +A+ L   M   G +P E T + ++ AC   G ++ G+++      
Sbjct: 284 SAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLK 343

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        FD +  P +  W +                 
Sbjct: 344 AGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTSC---------------- 387

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
              MQ   + P   T+A +L +C+++  LE GKQ+HA ++K    ++  + S L  +Y+K
Sbjct: 388 --RMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAK 445

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C   E    VF R+P  DI+ WN+MI+GLS N   ++A   F+++R     P   +F  V
Sbjct: 446 CGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNV 505

Query: 512 LSSCAKLSSSFQGR-QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           LS+C+ +    +G+      +++ G +  +   + ++++  + G ++  ++F +
Sbjct: 506 LSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIE 559


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 204/613 (33%), Positives = 319/613 (52%), Gaps = 41/613 (6%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           D  +   N  ++ + + G    A  +F  M   +  T+  M++G A   R+ +AL  FR 
Sbjct: 104 DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRS 163

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVES---DVFAQSD-----NKFSRNV--HGQQVHC 261
           + R     DS S +++L        GV S   DV A  D     +  S NV       H 
Sbjct: 164 IPRP----DSFSYNTLL-----HALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHG 214

Query: 262 LT------IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           L         L  E D    N +L  Y +NG +  A  +F +  E   +SWN ++AGY Q
Sbjct: 215 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQ 274

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
           + Q  +A ++  +M     + D V+   M+    R GD+   R +FD  P   V +W A+
Sbjct: 275 RSQIEEAQKMFNKMP----QRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAI 330

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA--IILSSCAAMGILESGKQVHAASLKT 433
           +S Y+Q+   +EA ++F  M      PD+  ++   ++++     ++E  K++  A    
Sbjct: 331 VSGYAQNGMLEEAKRVFDAM------PDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCR 384

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
                N + +G    Y++    + A  +F  +P+ D V W +M+A  S      E    F
Sbjct: 385 NVASWNTMLTG----YAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLF 440

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
           K+M +   +  + +FA VLS+CA +++   G Q+H+++ K GY    FVG+AL+ MY KC
Sbjct: 441 KEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKC 500

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +  A   F+ M  ++ V+WN MI GYA++G+G EA+ ++  M  +  KPDDIT V +L
Sbjct: 501 GSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVL 560

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
            ACSHSGLV+ G+  F SM  D GV    +HYTCMID LGRAG   EA  L+ +MP + D
Sbjct: 561 AACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPD 620

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
             +W  LL + R+H N  L + AAE++F L+P+N+  Y LL+NIY+S G+W D+  +R +
Sbjct: 621 STMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHI 680

Query: 734 MSENCIVKDPAYS 746
           M E  + K P +S
Sbjct: 681 MHERGVKKVPGFS 693



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 157/600 (26%), Positives = 265/600 (44%), Gaps = 91/600 (15%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           NR I  + +      A+ LF  MP +   ++N +L+    +  L  A   F  +P  +  
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSF 170

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S+N L+ AL  +       +++++M  +  V  ++ ++S            H    HGLV
Sbjct: 171 SYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISS------------HAN--HGLV 216

Query: 147 ------IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
                   +  +K+    N +L+ Y + G  + A  +F+  +E + +++ A+M+G  +  
Sbjct: 217 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRS 276

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
           ++ EA +MF  M ++    D VS ++++   AR G   E+                +   
Sbjct: 277 QIEEAQKMFNKMPQR----DVVSWNTMVSGYARRGDMAEAR---------------RLFD 317

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
              I+     D+    +++  YA+NG ++ A+ +F  +P+++ VSWN M+A Y Q+    
Sbjct: 318 VAPIR-----DVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMME 372

Query: 321 KAIELLQRMKSCGFEPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
           +A EL   M         V S N ML    ++G +   R +F  MP     SW AML++Y
Sbjct: 373 EAKELFDAMPC-----RNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAY 427

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           SQ    +E ++LF+EM   G   +R+  A +LS+CA +  LE G Q+H+  +K    +  
Sbjct: 428 SQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGC 487

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           +V + L+ +Y KC   E A   F  + E D+V WN+MIAG + +    EA   F  MR+ 
Sbjct: 488 FVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKT 547

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
              P   +   VL++C+                           S L+E         G 
Sbjct: 548 STKPDDITLVGVLAACSH--------------------------SGLVEK--------GI 573

Query: 560 RQFFDMMHGKNTVTWNE----MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
             F+ M       T  E    MI    + G  DEAV L KDM     +PD   + A+L A
Sbjct: 574 SYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDM---PFEPDSTMWGALLGA 630



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 199/424 (46%), Gaps = 54/424 (12%)

Query: 12  AHILRNG-------LFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           A  +RNG       LFD     D    N L+  Y + +    AQ +F+KMP +D+ SWN 
Sbjct: 239 AAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNT 298

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           ++S   +  D+  A +LFD  P R+V +W  ++S   +NG+ E+A  V++ M ++  V  
Sbjct: 299 MVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSW 358

Query: 120 HITLAS-----VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           +  +A+     + + +  L D    R             N+   N +L+ YA+ G    A
Sbjct: 359 NAMMAAYVQRRMMEEAKELFDAMPCR-------------NVASWNTMLTGYAQAGMLDEA 405

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             +F  M + + V++ AM++  ++     E L++F+ M R    ++  + + VL  CA  
Sbjct: 406 RAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCA-- 463

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
                 D+ A           G Q+H   IK G+     + N+LL MY K G M+ A   
Sbjct: 464 ------DIAALE--------CGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSA 509

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  + ER VVSWN MIAGY +     +A+E+   M+    +PD++T + +L AC  SG +
Sbjct: 510 FEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLV 569

Query: 355 KTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           + G   F SM      +     +  M+    ++    EA+ L ++M F   +PD T    
Sbjct: 570 EKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPF---EPDSTMWGA 626

Query: 410 ILSS 413
           +L +
Sbjct: 627 LLGA 630



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH+ +++ G     F+ N L+ +Y KC +   A   F++M  +D+ SWN +++   +
Sbjct: 471 GMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYAR 530

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFV---PT 119
               + A ++FD M + +     ++   +++A   +GL EK +S +  M  +  V   P 
Sbjct: 531 HGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPE 590

Query: 120 HIT 122
           H T
Sbjct: 591 HYT 593


>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g32430, mitochondrial; Flags: Precursor
 gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
 gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
 gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 210/716 (29%), Positives = 350/716 (48%), Gaps = 69/716 (9%)

Query: 73  AYKLFDEMPERN-VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH---ITLASVFK 128
           A+KLFD   +RN   S N+ IS  +R     +ALS++ +    G+   H   +TL    K
Sbjct: 27  AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           A     D++ G + HG     G    + V+NA++ +Y K G   +A+ +FE + +P+ V+
Sbjct: 87  ACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           +  ++SG    D    AL     M    V  D+ + S+ L  C      V S+ F     
Sbjct: 145 WNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFC------VGSEGF----- 190

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                + G Q+    +K G E+DL + NS + MY+++G    A  +F  +  + ++SWN 
Sbjct: 191 -----LLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNS 245

Query: 309 MIAGYGQKYQ-STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------- 360
           +++G  Q+     +A+ + + M   G E D V+  +++  C    D+K  R++       
Sbjct: 246 LLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR 305

Query: 361 ----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                       F  M   +V SW  M+SS     N  +A+ +F
Sbjct: 306 GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIF 360

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
             M+F GV P+  T   ++++      ++ G ++H   +KT    +  V +  I +Y+K 
Sbjct: 361 LNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF 420

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
           +  E A++ F  I   +I+ WN+MI+G + N    EA   F       M P +++F +VL
Sbjct: 421 EALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVL 479

Query: 513 SSCAKLS--SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
           ++ A     S  QG++ HA + K G  +   V SAL++MY K G+I  + + F+ M  KN
Sbjct: 480 NAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKN 539

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
              W  +I  Y+ +G  +  + L+  MI   V PD +TF+++LTAC+  G+VD G EIFN
Sbjct: 540 QFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFN 599

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
            M   + +EP  +HY+CM+D LGRAG   EAE L+ E+P      + + +L SCRLH NV
Sbjct: 600 MMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNV 659

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++  + AE    + P+ S  Y  + NIY+    WD    +R+ M +  + K+  +S
Sbjct: 660 KMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFS 715



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 247/499 (49%), Gaps = 65/499 (13%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA++    K+   + A  +F+ + + +VVSWN ++S    N +   AL+   +M + G V
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVV 171

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
               T ++             G +    V+K GL+ ++ V N+ +++Y++ G  + A  V
Sbjct: 172 FDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRV 231

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRV-VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           F+EMS  + +++ +++SGL++      EA+ +FR M+R+ V +D VS +SV+  C  E  
Sbjct: 232 FDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHE-- 289

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                    +D K +R +HG     L IK G+E+ L + N L+  Y+K G +++ + +F 
Sbjct: 290 ---------TDLKLARQIHG-----LCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFH 335

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--------- 347
            + ER+VVSW  MI+          A+ +   M+  G  P+EVT + ++ A         
Sbjct: 336 QMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKE 390

Query: 348 -------CVRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                  C+++G                    ++  ++ F+ +    + SWNAM+S ++Q
Sbjct: 391 GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 450

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA-AMGI-LESGKQVHAASLKTASHIDN 439
           +    EA+K+F       + P+  T   +L++ A A  I ++ G++ HA  LK   +   
Sbjct: 451 NGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCP 509

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM-FFKQMRQ 498
            V+S L+ +Y+K    + +E+VF+ + + +   W S+I+  S +  D E  M  F +M +
Sbjct: 510 VVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHG-DFETVMNLFHKMIK 568

Query: 499 NEMYPTQFSFATVLSSCAK 517
             + P   +F +VL++C +
Sbjct: 569 ENVAPDLVTFLSVLTACNR 587



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 218/500 (43%), Gaps = 94/500 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  L + +++ GL  D  + N  I +YS+  +   A+ +FD+M  KD+ SWN++LS   +
Sbjct: 193 GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQ 252

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                F                              +A+ ++  M  EG    H++  SV
Sbjct: 253 EGTFGF------------------------------EAVVIFRDMMREGVELDHVSFTSV 282

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                   D++  R+ HGL IK G +  + V N L+S Y+KCG  +    VF +MSE N 
Sbjct: 283 ITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNV 342

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T M+S  +  D   +A+ +F  M    V  + V+    +G+     C  +       
Sbjct: 343 VSWTTMIS--SNKD---DAVSIFLNMRFDGVYPNEVTF---VGLINAVKCNEQIK----- 389

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G ++H L IK GF ++  + NS + +YAK   ++ A+  F ++  R ++SW
Sbjct: 390 --------EGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISW 441

Query: 307 NVMIAGYGQKYQSTKAIEL-----------------------------LQRMKSC----- 332
           N MI+G+ Q   S +A+++                             +++ + C     
Sbjct: 442 NAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLL 501

Query: 333 --GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
             G     V S  +L    + G+I    ++F+ M   +   W +++S+YS   + +  + 
Sbjct: 502 KLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMN 561

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT----ASHIDNYVASGLI 446
           LF +M    V PD  T   +L++C   G+++ G ++    ++      SH ++Y  S ++
Sbjct: 562 LFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSH-EHY--SCMV 618

Query: 447 GIYSKCQRNELAERVFHRIP 466
            +  +  R + AE +   +P
Sbjct: 619 DMLGRAGRLKEAEELMSEVP 638



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 185/424 (43%), Gaps = 59/424 (13%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + +H   ++ G      + N L+  YSKC    + + +F +M  +++ SW  ++S+    
Sbjct: 296 RQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN--- 352

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                                            ++ A+S++  M  +G  P  +T   + 
Sbjct: 353 ---------------------------------KDDAVSIFLNMRFDGVYPNEVTFVGLI 379

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A      ++ G + HGL IK G      V N+ ++LYAK    + A   FE+++    +
Sbjct: 380 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREII 439

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++ AM+SG A+     EAL+MF L        +  +  SVL   A        D+  +  
Sbjct: 440 SWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEYTFGSVLNAIA-----FAEDISVK-- 491

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   GQ+ H   +KLG  +   +S++LLDMYAK G++D +E +F+ + +++   W 
Sbjct: 492 -------QGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWT 544

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
            +I+ Y         + L  +M      PD VT +++L AC R G +  G E+F+ M   
Sbjct: 545 SIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEV 604

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
               PS   ++ M+    ++   KEA +L  E+      P  + L  +L SC   G ++ 
Sbjct: 605 YNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP---GGPGESMLQSMLGSCRLHGNVKM 661

Query: 423 GKQV 426
           G +V
Sbjct: 662 GAKV 665



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 161/352 (45%), Gaps = 57/352 (16%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N+ ++   K + LE A K F+++  R ++SWN +IS   +NG   +AL ++   + E  +
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET-M 469

Query: 118 PTHITLASVFKASTALLD--VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
           P   T  SV  A     D  V+ G+RCH  ++K+GL+    V++ALL +YAK G    + 
Sbjct: 470 PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESE 529

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            VF EMS+ N+  +T+++S  +        + +F  MI++ V+ D V+  SVL  C R+G
Sbjct: 530 KVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKG 589

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKL-GFEADLHLSNSLLDMYAKNGDMDSAEVI 294
             V+                G ++  + I++   E      + ++DM  + G +  AE +
Sbjct: 590 M-VDK---------------GYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEEL 633

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
            S +P            G G+         +LQ               +ML +C   G++
Sbjct: 634 MSEVP-----------GGPGES--------MLQ---------------SMLGSCRLHGNV 659

Query: 355 KTG---REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
           K G    E+   M      S+  M + Y++ E   +A ++ + M+ + V  +
Sbjct: 660 KMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKE 711


>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 224/744 (30%), Positives = 380/744 (51%), Gaps = 75/744 (10%)

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVP 118
           LS  C+   L  A +LFD +P  + V WN +I  LV N   ++AL  Y+ M  S+     
Sbjct: 35  LSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKC 94

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC---------- 168
              T +SV KA     ++  G+  H   ++  ++ +  V N+LL++Y+ C          
Sbjct: 95  DSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMV 154

Query: 169 -GWTKHAV--PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
            G+++  +   VF+ M +   V +  +++   +T+R  EA++ F +M++  +    VS  
Sbjct: 155 SGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFV 214

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA--DLHLSNSLLDMYA 283
           +V    +  G           D K +  VHG     + +KLG E   DL++ +S + MYA
Sbjct: 215 NVFPAFSSLG-----------DFKNANVVHG-----MLVKLGSEYVNDLYVVSSAIFMYA 258

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL-QRMKSCGFEPDEVTSI 342
           + G ++ A+ +F N  ER+   WN MI+ + Q   S + I+L  Q ++S     DEVT +
Sbjct: 259 ELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLL 318

Query: 343 NMLVA--------------------------CV---------RSGDIKTGREMFDSMPSP 367
           + + A                          CV         R   I T  ++FD+MP  
Sbjct: 319 SAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEK 378

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
            V SWN M+S++ Q+  + EA+ LF EM+ + +  D  T+  +LS+ + +   + GKQ H
Sbjct: 379 DVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTH 438

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI--PELDIVCWNSMIAGLSLNSL 485
              L+     +  + S LI +Y+K    E A+ VF +    E D   WNSM++G + N L
Sbjct: 439 GYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGL 497

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             +AF+  +QM   ++ P   + A++L +C        G+Q+H    ++    ++FV +A
Sbjct: 498 VDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATA 557

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           LI+MY K G I  A   F   + K+ VT++ MI GY Q+G G+ A+ ++  M  SG++PD
Sbjct: 558 LIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPD 617

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            +T VA+L+ACS++GLVD G++IF SM+  + ++P  +H+ C+ D LGRAG   +A   +
Sbjct: 618 AVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFV 677

Query: 666 DEMPCKDDPV-IWEVLLSSCRLHANVRLAKRAAEELFRLDPKN--SAPYSLLANIYSSLG 722
             +  K + + IW  LL++CR+H    L K  A++L  ++  N  +  + LL+NIY+   
Sbjct: 678 IGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEER 737

Query: 723 RWDDLRAVRELMSENCIVKDPAYS 746
            W+++  VR+ M E  + K+   S
Sbjct: 738 NWENVDIVRKQMRERGLKKETGSS 761



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/593 (25%), Positives = 273/593 (46%), Gaps = 79/593 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK +HAH LR  +     + N L+ +YS C++T                    ++S  
Sbjct: 113 VVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPD---------------GKMVSGY 157

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            + D      K+FD M +R VV+WN LI+  VR     +A+  ++ M   G  P+ ++  
Sbjct: 158 SRCD---LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFV 214

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLD--KNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           +VF A ++L D ++    HG+++K+G +   ++YV ++ + +YA+ G  + A  VF+   
Sbjct: 215 NVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCL 274

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESD 241
           E N   +  M+S   + +  +E +++F   +  +  +ID V+L S +             
Sbjct: 275 ERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISA----------- 323

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
             A    KF      +Q+H   IK      + + N+L+ MY++   +D++  IF N+PE+
Sbjct: 324 --ASHLQKFEL---AEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEK 378

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
            VVSWN MI+ + Q   + +A+ L   MK      D VT   +L A              
Sbjct: 379 DVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTH 438

Query: 349 ---------------------VRSGDIKTGREMFDSMPS--PSVSSWNAMLSSYSQSENH 385
                                 +SG I+  + +F+   S     ++WN+M+S Y+Q+   
Sbjct: 439 GYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLV 498

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            +A  + R+M  + V P+  TLA IL +C   G ++ GKQ+H  S++     + +VA+ L
Sbjct: 499 DQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATAL 558

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YSK      AE VF +  E  IV +++MI G   + +   A   F +M+++ + P  
Sbjct: 559 IDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDA 618

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
            +   VLS+C+      +G Q+   +        ++      E +C   D+ G
Sbjct: 619 VTLVAVLSACSYAGLVDEGLQIFESMRT------VYNIQPSTEHFCCVADMLG 665


>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22150, chloroplastic; Flags: Precursor
 gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 820

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 223/737 (30%), Positives = 363/737 (49%), Gaps = 68/737 (9%)

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT- 119
           LS  C+  + + A +LFD +P+   V WN +I   + N L  +AL  Y++M         
Sbjct: 46  LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105

Query: 120 -HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV--- 175
              T +S  KA     +++ G+  H  +I+   + +  V N+L+++Y  C          
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165

Query: 176 ---PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
               VF+ M   N V +  ++S   KT R  EA   F +M+R  V    VS  +V    +
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE--ADLHLSNSLLDMYAKNGDMDS 290
                 +++VF                + L +KLG E   DL + +S + MYA+ GD++S
Sbjct: 226 ISRSIKKANVF----------------YGLMLKLGDEYVKDLFVVSSAISMYAELGDIES 269

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL-LQRMKSCGFEPDEVTSI------- 342
           +  +F +  ER++  WN MI  Y Q     ++IEL L+ + S     DEVT +       
Sbjct: 270 SRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVS 329

Query: 343 ----------------------------NMLVACVRSGDIKTGREMFDSMPSPSVSSWNA 374
                                       +++V   R G +     +F SM    V SWN 
Sbjct: 330 ALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNT 389

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+S++ Q+    E + L  EMQ +G K D  T+  +LS+ + +   E GKQ HA  ++  
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHR--IPELDIVCWNSMIAGLSLNSLDIEAFMF 492
              +  + S LI +YSK     +++++F      E D   WNSMI+G + N    + F+ 
Sbjct: 450 IQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLV 508

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           F++M +  + P   + A++L +C+++ S   G+Q+H    +     ++FV SAL++MY K
Sbjct: 509 FRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSK 568

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
            G I  A   F     +N+VT+  MI GY Q+G G+ A+ L+  M  SG+KPD ITFVA+
Sbjct: 569 AGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAV 628

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L+ACS+SGL+D G++IF  M+  + ++P  +HY C+ D LGR G  +EA   +  +  + 
Sbjct: 629 LSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEG 688

Query: 673 DPV-IWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYS-LLANIYSSLGRWDDLRA 729
           +   +W  LL SC+LH  + LA+  +E L + D  KN + Y  LL+N+Y+   +W  +  
Sbjct: 689 NIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDK 748

Query: 730 VRELMSENCIVKDPAYS 746
           VR  M E  + K+   S
Sbjct: 749 VRRGMREKGLKKEVGRS 765



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/557 (23%), Positives = 252/557 (45%), Gaps = 94/557 (16%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHS------AQHLFDKMPHKDIYSWNA 59
           AGK +H H++R        + N L+ +Y  C N          + +FD M  K++ +WN 
Sbjct: 125 AGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNT 184

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
                                          LIS  V+ G   +A   +  M      P+
Sbjct: 185 -------------------------------LISWYVKTGRNAEACRQFGIMMRMEVKPS 213

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLD--KNIYVANALLSLYAKCGWTKHAVPV 177
            ++  +VF A +    ++     +GL++K+G +  K+++V ++ +S+YA+ G  + +  V
Sbjct: 214 PVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRV 273

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI--RKAVSIDSVSLSSVLGVCAREG 235
           F+   E N   +  M+    + D +VE++E+F   I  ++ VS +   L +   V A + 
Sbjct: 274 FDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQ 333

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
             +                 G+Q H    K   E  + + NSL+ MY++ G +  +  +F
Sbjct: 334 VEL-----------------GRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVF 376

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------- 348
            ++ ER VVSWN MI+ + Q     + + L+  M+  GF+ D +T   +L A        
Sbjct: 377 LSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKE 436

Query: 349 ---------------------------VRSGDIKTGREMFD--SMPSPSVSSWNAMLSSY 379
                                       +SG I+  +++F+         ++WN+M+S Y
Sbjct: 437 IGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGY 496

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           +Q+ + ++   +FR+M  + ++P+  T+A IL +C+ +G ++ GKQ+H  S++     + 
Sbjct: 497 TQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNV 556

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           +VAS L+ +YSK    + AE +F +  E + V + +MI G   + +   A   F  M+++
Sbjct: 557 FVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQES 616

Query: 500 EMYPTQFSFATVLSSCA 516
            + P   +F  VLS+C+
Sbjct: 617 GIKPDAITFVAVLSACS 633



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 186/363 (51%), Gaps = 56/363 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  H  + +N       + N L+ +YS+C + H +                        
Sbjct: 337 GRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKS------------------------ 372

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                  + +F  M ER+VVSWN +ISA V+NGL+++ L +  +M  +GF   +IT+ ++
Sbjct: 373 -------FGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTAL 425

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLD---KNIYVANALLSLYAKCGWTKHAVPVFE--EM 181
             A++ L + E G++ H  +I+ G+     N Y    L+ +Y+K G  + +  +FE    
Sbjct: 426 LSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY----LIDMYSKSGLIRISQKLFEGSGY 481

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           +E ++ T+ +M+SG  +     +   +FR M+ + +  ++V+++S+L  C++ G     D
Sbjct: 482 AERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG---SVD 538

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           +             G+Q+H  +I+   + ++ ++++L+DMY+K G +  AE +FS   ER
Sbjct: 539 L-------------GKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER 585

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
           + V++  MI GYGQ     +AI L   M+  G +PD +T + +L AC  SG I  G ++F
Sbjct: 586 NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIF 645

Query: 362 DSM 364
           + M
Sbjct: 646 EEM 648



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 193/413 (46%), Gaps = 55/413 (13%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY-NK 110
           KD++  ++ +S   +  D+E + ++FD   ERN+  WN +I   V+N    +++ ++   
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEA 308

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           + ++  V   +T      A +AL  VE GR+ HG V K   +  I + N+L+ +Y++CG 
Sbjct: 309 IGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGS 368

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              +  VF  M E + V++  M+S   +     E L +   M ++   ID ++++++L  
Sbjct: 369 VHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL-- 426

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
                        + + N  ++ + G+Q H   I+ G + +  +++ L+DMY+K+G +  
Sbjct: 427 -------------SAASNLRNKEI-GKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRI 471

Query: 291 AEVIF--SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
           ++ +F  S   ER   +WN MI+GY Q   + K   + ++M      P+ VT  ++L AC
Sbjct: 472 SQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPAC 531

Query: 349 -----------------------------------VRSGDIKTGREMFDSMPSPSVSSWN 373
                                               ++G IK   +MF      +  ++ 
Sbjct: 532 SQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYT 591

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
            M+  Y Q    + AI LF  MQ  G+KPD  T   +LS+C+  G+++ G ++
Sbjct: 592 TMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI 644


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 219/781 (28%), Positives = 374/781 (47%), Gaps = 87/781 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  I++ GL  +  L N L+++YSKC +   A   F  +  + I +WN +++AQ  
Sbjct: 43  GRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSS 102

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +   + L+  M                   LEE+A +  NK++    +    +    
Sbjct: 103 PAAV---FDLYTRMK------------------LEERAENRPNKLTIIAVLGAIASGDPS 141

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             +S+    +   R  H  +    L+++++VA ALL  Y KCG  + A+ VF  +  P+ 
Sbjct: 142 SSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDL 201

Query: 187 VTFTAMMSGLAKTD-RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           + + A +   A  D R   AL + R M  + +  +  S  ++L  C              
Sbjct: 202 ICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGD-----------H 250

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S    +R++H +       +LGF  D+ ++ +L+ MY + G +D +  +F  +  R+ VS
Sbjct: 251 SSLPLARSIHAR-----VEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVS 305

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML-------------------- 345
           WN MIA + Q    + A  +  RM+  GF P+++T +  L                    
Sbjct: 306 WNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGW 365

Query: 346 VACV-----------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
           +AC                   +G I   R  FD++P+ ++ SWNAML++Y  +   +EA
Sbjct: 366 IACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREA 425

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI-DNYVASGLIG 447
           ++LF  M+ + + P++ +   +L  C     +   + +HA  +       ++ +A+G++ 
Sbjct: 426 MELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVR 482

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           ++++    E A   F      D V WN+ +A LS       A   F  M+     P +F+
Sbjct: 483 MFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFT 542

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGD-IYGARQFFDM 565
             +V+  CA L +   GR +  Q+     V  D+ V SA++ M  KCG  +    + F  
Sbjct: 543 LVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFAR 602

Query: 566 MHG--KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGLV 622
           M    K+ V WN MI  YAQ+G+G +A++L++ M   S V+PD  TFV++L+ CSH+GLV
Sbjct: 603 MPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLV 662

Query: 623 DVGVEIFNSMQLDHGVE--PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           + G+  F   +   G+E  P+ +HY C++D LGR G+  EAE  I +MP   D V+W  L
Sbjct: 663 EDGIHCFFLAREVLGIEQQPV-EHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSL 721

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           L +C  + ++   +RAA     L   +S  Y +L+NIY++ GRW+D   VRE M+E  + 
Sbjct: 722 LGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVK 781

Query: 741 K 741
           K
Sbjct: 782 K 782



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 142/638 (22%), Positives = 274/638 (42%), Gaps = 55/638 (8%)

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           ++ ++P   TLA + +      D+  GR+ H  ++K GL +N  + N L+ +Y+KC    
Sbjct: 18  HDDYIPIE-TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLD 76

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A   F  +      T+  +++  +    V +     +L  R     + +++ +VLG  A
Sbjct: 77  DANAAFSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIA 136

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                   D  + S ++       + VH        E DL ++ +LLD Y K G ++SA 
Sbjct: 137 ------SGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESAL 190

Query: 293 VIFSNLPERSVVSWNVMI-AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--- 348
            +FS +    ++ WN  I A  G   +  +A+ L++RM   G  P+  + + +L +C   
Sbjct: 191 EVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDH 250

Query: 349 --------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                            R G +     +F++M   +  SWNAM+
Sbjct: 251 SSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMI 310

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ--VHAASLKTA 434
           ++++Q  +   A  ++  MQ  G +P++ T    L +  +    + G+   +H       
Sbjct: 311 AAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAG 370

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V + L+ +Y      + A   F  IP  +IV WN+M+     N    EA   F 
Sbjct: 371 LEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFA 430

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG-YVNDIFVGSALIEMYCKC 553
            M++  + P + S+  VL  C  +S   + R +HA++  +G +  +  + + ++ M+ + 
Sbjct: 431 AMKRQSLAPNKVSYLAVLGCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARS 487

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +  A   FD    K++V+WN  +   +       A+  +  M   G +PD  T V+++
Sbjct: 488 GSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVV 547

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG-HFHEAEMLIDEMP-CK 671
             C+  G +++G  I   +     VE  +   + +++ + + G    E E L   MP  +
Sbjct: 548 DVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDR 607

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
            D V W  ++++   H +     R A +LFR+  + S+
Sbjct: 608 KDLVAWNTMIAAYAQHGH----GRKALKLFRIMQQRSS 641


>gi|119638460|gb|ABL85051.1| hypothetical protein 57h21.26 [Brachypodium sylvaticum]
          Length = 753

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 211/749 (28%), Positives = 374/749 (49%), Gaps = 66/749 (8%)

Query: 50  PHKD----IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKAL 105
           P++D    + S N ++ A  ++   + A ++FD MP R+VVSWN+ +SA  R+G    A 
Sbjct: 17  PYEDDDGGVVSGNRLMGAHLRAGRPDAAREVFDGMPRRDVVSWNSAMSAHARSGAHAGAA 76

Query: 106 SVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
            ++ ++   G  P   +L++V  A   L  +E GR  HGL ++     N++V  +L+++Y
Sbjct: 77  GLFLELRRRGVRPDGTSLSTVLSACARLEALELGRCVHGLALRSCSTGNVFVGASLVTMY 136

Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR-----------LMIR 214
           A CG       VF+++  PN   + A++SGL    RV +A  +F             M++
Sbjct: 137 ASCGVVDCLERVFDDVDSPNVALWNALVSGLVMNHRVGDARRVFNRMPARNVVSWTAMVK 196

Query: 215 KAVSI----------------DSVSLSSVLGVCA----------------REGCGVESDV 242
             VS+                +SVS   ++G                   R G  V + +
Sbjct: 197 GHVSVHDVGQAVELFNLMPVKNSVSWCVMIGGLVHCQQFREAVELFNSLMRNGDEVTNVI 256

Query: 243 FAQSDNKFS--RNVHGQQ-VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
             +  N ++  +++ G + +H  ++K GF  DL +  SL+ MY  + D+D A + F  + 
Sbjct: 257 LVKVVNAYAGLKSIGGGRCIHGFSVKSGFVHDLIIEASLVAMYCNSLDIDEARLEFDKMD 316

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
            + V SWN +I GY    +  +A  + + M       D+V+  +M+   +R G I    E
Sbjct: 317 RKQVGSWNAIIRGYIYAEKIDEAENIFESMTY----RDKVSWNSMINGYIRDGRIADATE 372

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           ++  MP  +V +  A++S +  +    +A    R+M +   + D  +   +L      G 
Sbjct: 373 LYSKMPEKNVEAATALMSWFIDNGKLGKA----RDMFYSLPQVDVMSCTALLFGYMKEGY 428

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE--RVFHRIPELDIVCWNSMI 477
           L+    +     K  +   N + +G +       + ++AE  ++F+  P  D    +  +
Sbjct: 429 LDDALDLFHRMHKRTAVTYNVMIAGFL------HQGKVAEAYKLFNESPAHDATTCSCFV 482

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
            GL+ N L  +A   +K+M  + M+ ++   ++++S C+  S    G Q+HA   K G+ 
Sbjct: 483 TGLAQNGLIHDALKLYKKMLVSNMHTSESVVSSLISCCSHHSMIVHGLQLHATTIKLGFE 542

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
             + + ++LI +Y KCG++  A+  FD M  ++ VTWN +IHGYA N  G  A+ ++K+M
Sbjct: 543 LYLIIQNSLISLYSKCGEMVAAQNIFDQMVKRDVVTWNTLIHGYAFNSLGQNAIEMFKNM 602

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
             + V PD+ITF+ +L+AC+H  L++     F+ M  D+G+ P + HY CM+D L R G 
Sbjct: 603 KIAQVDPDEITFLGVLSACNHMSLLEEAKHFFDVMTCDYGIAPNMMHYACMVDLLCRRGM 662

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
             EAE L+  MP + D  IW  LLSSCRL  + +LA+ AA +L  ++P    PY  L N+
Sbjct: 663 VEEAEGLMKSMPFEPDSAIWTSLLSSCRLSGSDKLAEHAASQLIAINPCTKMPYLHLINV 722

Query: 718 YSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + S+ +W  + ++R  ++ +   K+  YS
Sbjct: 723 HGSMDKWAVIDSLRSQITRSTTEKEVGYS 751



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 142/612 (23%), Positives = 276/612 (45%), Gaps = 76/612 (12%)

Query: 19  LFDDT-----FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
           +FDD       L N L+      +    A+ +F++MP +++ SW A++       D+  A
Sbjct: 148 VFDDVDSPNVALWNALVSGLVMNHRVGDARRVFNRMPARNVVSWTAMVKGHVSVHDVGQA 207

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
            +LF+ MP +N VSW  +I  LV      +A+ ++N +   G   T++ L  V  A   L
Sbjct: 208 VELFNLMPVKNSVSWCVMIGGLVHCQQFREAVELFNSLMRNGDEVTNVILVKVVNAYAGL 267

Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
             +  GR  HG  +K G   ++ +  +L+++Y        A   F++M      ++ A++
Sbjct: 268 KSIGGGRCIHGFSVKSGFVHDLIIEASLVAMYCNSLDIDEARLEFDKMDRKQVGSWNAII 327

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
            G    +++ EA  +F  M  +    D VS +S++    R+G        A +   +S+ 
Sbjct: 328 RGYIYAEKIDEAENIFESMTYR----DKVSWNSMINGYIRDG------RIADATELYSKM 377

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
                          E ++  + +L+  +  NG +  A  +F +LP+  V+S   ++ GY
Sbjct: 378 P--------------EKNVEAATALMSWFIDNGKLGKARDMFYSLPQVDVMSCTALLFGY 423

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
            ++     A++L  RM     +   VT   M+   +  G +    ++F+  P+   ++ +
Sbjct: 424 MKEGYLDDALDLFHRMH----KRTAVTYNVMIAGFLHQGKVAEAYKLFNESPAHDATTCS 479

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
             ++  +Q+    +A+KL+++M    +    + ++ ++S C+   ++  G Q+HA ++K 
Sbjct: 480 CFVTGLAQNGLIHDALKLYKKMLVSNMHTSESVVSSLISCCSHHSMIVHGLQLHATTIKL 539

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
              +   + + LI +YSKC     A+ +F ++ + D+V WN++I G + NSL   A   F
Sbjct: 540 GFELYLIIQNSLISLYSKCGEMVAAQNIFDQMVKRDVVTWNTLIHGYAFNSLGQNAIEMF 599

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
           K M+  ++ P + +F  VLS+C  +S                          L+E     
Sbjct: 600 KNMKIAQVDPDEITFLGVLSACNHMS--------------------------LLE----- 628

Query: 554 GDIYGARQFFDMMH-----GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
                A+ FFD+M        N + +  M+    + G  +EA  L K M     +PD   
Sbjct: 629 ----EAKHFFDVMTCDYGIAPNMMHYACMVDLLCRRGMVEEAEGLMKSM---PFEPDSAI 681

Query: 609 FVAILTACSHSG 620
           + ++L++C  SG
Sbjct: 682 WTSLLSSCRLSG 693



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 211/441 (47%), Gaps = 47/441 (10%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ +H   +++G   D  +   L+ +Y    +   A+  FDKM  K + SWNAI+    
Sbjct: 272 GGRCIHGFSVKSGFVHDLIIEASLVAMYCNSLDIDEARLEFDKMDRKQVGSWNAIIRGYI 331

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            ++ ++ A  +F+ M  R+ VSWN++I+  +R+G    A  +Y+KM  +           
Sbjct: 332 YAEKIDEAENIFESMTYRDKVSWNSMINGYIRDGRIADATELYSKMPEKN---------- 381

Query: 126 VFKASTALLD--VEHGRRCHGLVIKIGLDK-NIYVANALLSLYAKCGWTKHAVPVFEEMS 182
             +A+TAL+   +++G+      +   L + ++    ALL  Y K G+   A+ +F  M 
Sbjct: 382 -VEAATALMSWFIDNGKLGKARDMFYSLPQVDVMSCTALLFGYMKEGYLDDALDLFHRMH 440

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC------ 236
           +   VT+  M++G     +V EA ++F     ++ + D+ + S  +   A+ G       
Sbjct: 441 KRTAVTYNVMIAGFLHQGKVAEAYKLF----NESPAHDATTCSCFVTGLAQNGLIHDALK 496

Query: 237 --------------GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
                          V S + +   +  S  VHG Q+H  TIKLGFE  L + NSL+ +Y
Sbjct: 497 LYKKMLVSNMHTSESVVSSLISCCSHH-SMIVHGLQLHATTIKLGFELYLIIQNSLISLY 555

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           +K G+M +A+ IF  + +R VV+WN +I GY        AIE+ + MK    +PDE+T +
Sbjct: 556 SKCGEMVAAQNIFDQMVKRDVVTWNTLIHGYAFNSLGQNAIEMFKNMKIAQVDPDEITFL 615

Query: 343 NMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
            +L AC     ++  +  FD M      +P++  +  M+    +    +EA  L + M F
Sbjct: 616 GVLSACNHMSLLEEAKHFFDVMTCDYGIAPNMMHYACMVDLLCRRGMVEEAEGLMKSMPF 675

Query: 398 RGVKPDRTTLAIILSSCAAMG 418
              +PD      +LSSC   G
Sbjct: 676 ---EPDSAIWTSLLSSCRLSG 693



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 151/297 (50%), Gaps = 44/297 (14%)

Query: 332 CGFEPDE--VTSINMLV-ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
           C +E D+  V S N L+ A +R+G     RE+FD MP   V SWN+ +S++++S  H  A
Sbjct: 16  CPYEDDDGGVVSGNRLMGAHLRAGRPDAAREVFDGMPRRDVVSWNSAMSAHARSGAHAGA 75

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
             LF E++ RGV+PD T+L+ +LS+CA +  LE G+ VH  +L++ S  + +V + L+ +
Sbjct: 76  AGLFLELRRRGVRPDGTSLSTVLSACARLEALELGRCVHGLALRSCSTGNVFVGASLVTM 135

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+ C   +  ERVF  +   ++  WN++++GL +N    +A   F +M      P +   
Sbjct: 136 YASCGVVDCLERVFDDVDSPNVALWNALVSGLVMNHRVGDARRVFNRM------PAR--- 186

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
                                         ++   +A+++ +    D+  A + F++M  
Sbjct: 187 ------------------------------NVVSWTAMVKGHVSVHDVGQAVELFNLMPV 216

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           KN+V+W  MI G        EAV L+  ++ +G +  ++  V ++ A  ++GL  +G
Sbjct: 217 KNSVSWCVMIGGLVHCQQFREAVELFNSLMRNGDEVTNVILVKVVNA--YAGLKSIG 271



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 35/204 (17%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G  LHA  ++ G      + N LI LYSKC    +AQ++FD+M  +D+ +W       
Sbjct: 527 VHGLQLHATTIKLGFELYLIIQNSLISLYSKCGEMVAAQNIFDQMVKRDVVTW------- 579

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                   N LI     N L + A+ ++  M      P  IT  
Sbjct: 580 ------------------------NTLIHGYAFNSLGQNAIEMFKNMKIAQVDPDEITFL 615

Query: 125 SVFKASTALLDVEHGRRCHGLVI-KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS- 182
            V  A   +  +E  +    ++    G+  N+     ++ L  + G  + A  + + M  
Sbjct: 616 GVLSACNHMSLLEEAKHFFDVMTCDYGIAPNMMHYACMVDLLCRRGMVEEAEGLMKSMPF 675

Query: 183 EPNEVTFTAMMSG--LAKTDRVVE 204
           EP+   +T+++S   L+ +D++ E
Sbjct: 676 EPDSAIWTSLLSSCRLSGSDKLAE 699


>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
 gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 184/538 (34%), Positives = 291/538 (54%), Gaps = 47/538 (8%)

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG-DMDSAEVIFSNLPERSVVSW 306
           + F+R   G+Q H   +K G E D  + NSLL +Y K G D      +F  L  + VVSW
Sbjct: 74  DSFTR---GRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSW 130

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG--------- 357
             MI GY ++ +S  AIEL   M   G EP+  T   ++ AC   G++  G         
Sbjct: 131 ASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVR 190

Query: 358 --------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                     R++FD +  P    W  ++S++++++ ++EA+  
Sbjct: 191 RGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGF 250

Query: 392 FREMQFRGVK--PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           F  ++ R  +  PD  T   +L++C  +G L  G+++HA  +      +    S L+ +Y
Sbjct: 251 FY-LKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMY 309

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            KC   E ++R+F R+   + V W++++A    N    +A   F++M++ ++Y    SF 
Sbjct: 310 GKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVDLY----SFG 365

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           TV+ +CA L++   G+++H Q  + G   D+ V SAL+++Y KCG I  A + FD M  +
Sbjct: 366 TVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTR 425

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           N +TWN MIHG+AQNG    A+++++ MI  G+KPD I+F+ +L ACSH+GLVD     F
Sbjct: 426 NLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYF 485

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH-A 688
           + M   +G++P ++HY CM+D LGRAG   EAE LI+   C++D  +W VLL +C     
Sbjct: 486 DLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCT 545

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           N   A+R A++L  L+P+    Y  LAN+Y ++GRWDD   VRELM    + K P  S
Sbjct: 546 NSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMPGQS 603



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 211/467 (45%), Gaps = 90/467 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKC-NNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+  HAH++++GL  D F+ N L+ LY K  +++   + +FD +  KD+ SW +      
Sbjct: 79  GRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWAS------ 132

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    +I+  VR G    A+ ++  M + G  P   TL++
Sbjct: 133 -------------------------MITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSA 167

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA + + ++  G+  HG+V++ G D N  + ++L+ +Y +   +  A  +F+E+ EP+
Sbjct: 168 VIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPD 227

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFA 244
            V +T ++S   + D   EAL  F L  R   +  D+ +  SVL  C   G         
Sbjct: 228 PVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLG--------- 278

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                  R   G+++H   I  GF  ++   +SL+DMY K G ++ ++ +F  +  R+ V
Sbjct: 279 -------RLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSV 331

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           SW+ ++A Y       KA+ L + MK    E D  +   ++ AC     +  G+E+    
Sbjct: 332 SWSALLAVYCHNGDYEKAVNLFREMK----EVDLYSFGTVIRACAGLAAVTPGKEIHCQY 387

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          FD MP+ ++ +WN+M+  ++Q+ +   AI
Sbjct: 388 IRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAI 447

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           ++F  M   G+KPD  +   +L +C+  G+++  +  H   L T  +
Sbjct: 448 QIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQAR--HYFDLMTGKY 492



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 188/418 (44%), Gaps = 60/418 (14%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK  H  ++R G   +  + + LI++Y +                      N++ S  
Sbjct: 179 VLGKCFHGVVVRRGFDSNPVILSSLIDMYGR----------------------NSVSSD- 215

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSV-YNKMSNEGFVPTHITL 123
                   A +LFDE+ E + V W  +ISA  RN L E+AL   Y K       P + T 
Sbjct: 216 --------ARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTF 267

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            SV  A   L  +  G   H  VI  G   N+   ++L+ +Y KCG  + +  +F+ MS 
Sbjct: 268 GSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSN 327

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V+++A+++         +A+ +FR M      +D  S  +V+  CA           
Sbjct: 328 RNSVSWSALLAVYCHNGDYEKAVNLFREM----KEVDLYSFGTVIRACA----------- 372

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                  +    G+++HC  I+ G   D+ + ++L+D+YAK G ++ A  +F  +P R++
Sbjct: 373 -----GLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNL 427

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           ++WN MI G+ Q   S  AI++ + M   G +PD ++ I +L AC  +G +   R  FD 
Sbjct: 428 ITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDL 487

Query: 364 MPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           M       P V  +N M+    ++   +EA  L    + R    D +   ++L +C  
Sbjct: 488 MTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRN---DSSLWLVLLGACTT 542



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 145/299 (48%), Gaps = 5/299 (1%)

Query: 387 EAIKLFREMQFRGVKPDRTTL-AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +A+ L   +     + ++  L A +L +C  +     G+Q HA  +K+    D +V + L
Sbjct: 42  DALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSL 101

Query: 446 IGIYSKCQRNE-LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           + +Y K   +  L  RVF  +   D+V W SMI G         A   F  M  + + P 
Sbjct: 102 LSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPN 161

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            F+ + V+ +C+++ +   G+  H  + + G+ ++  + S+LI+MY +      ARQ FD
Sbjct: 162 GFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFD 221

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVR-LYKDMIASGVKPDDITFVAILTACSHSGLVD 623
            +   + V W  +I  + +N   +EA+   Y    A  + PD+ TF ++LTAC + G + 
Sbjct: 222 ELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLR 281

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            G EI ++  + +G    +   + ++D  G+ G   +++ L D M  ++  V W  LL+
Sbjct: 282 QGEEI-HAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNS-VSWSALLA 338



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 103/179 (57%), Gaps = 7/179 (3%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG-DIYGARQFFDMM 566
           +A++L +C K+ S  +GRQ HA + K G   D FVG++L+ +Y K G D    R+ FD +
Sbjct: 63  YASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGL 122

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             K+ V+W  MI GY + G    A+ L+ DM+ SG++P+  T  A++ ACS  G + +G 
Sbjct: 123 FVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLG- 181

Query: 627 EIFNSMQLDHGVE--PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           + F+ + +  G +  P++   + +ID  GR     +A  L DE+  + DPV W  ++S+
Sbjct: 182 KCFHGVVVRRGFDSNPVI--LSSLIDMYGRNSVSSDARQLFDEL-LEPDPVCWTTVISA 237


>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
 gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
 gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 748

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 221/726 (30%), Positives = 356/726 (49%), Gaps = 77/726 (10%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALV-RNGLEEKALSVYNKMSN-----EGFVPTHITL 123
           L+F  K F      N ++ ++L++ +  R GL  + LS   +  N     EG+    I  
Sbjct: 3   LQFRAKTF-----FNNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEGY---KILF 54

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            +  K+ + +L    G+  HG +IK  L+  +Y+ N LL++Y KC     A  +F+ M E
Sbjct: 55  QTAAKSGSVVL----GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPE 110

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N ++F +++SG  +     +A+E+F       + +D  + +  LG C  E C ++    
Sbjct: 111 RNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG-ERCDLD---- 165

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+ +H L +  G    + L N L+DMY+K G +D A  +F    ER  
Sbjct: 166 -----------LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQ 214

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRM----------------KSC--------------- 332
           VSWN +I+GY +   + + + LL +M                K+C               
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274

Query: 333 -------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ---- 381
                  G E D V    +L    ++G +K   ++F  MPS +V ++NAM+S + Q    
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334

Query: 382 -SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
             E   EA KLF +MQ RG++P  +T +++L +C+A   LE G+Q+HA   K     D +
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF 394

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           + S LI +Y+     E   + F    + DI  W SMI     N     AF  F+Q+  + 
Sbjct: 395 IGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH 454

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           + P +++ + ++S+CA  ++   G Q+     K G      V ++ I MY K G++  A 
Sbjct: 455 IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
           Q F  +   +  T++ MI   AQ+G  +EA+ +++ M   G+KP+   F+ +L AC H G
Sbjct: 515 QVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           LV  G++ F  M+ D+ + P   H+TC++D LGR G   +AE LI     +D PV W  L
Sbjct: 575 LVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRAL 634

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           LSSCR++ +  + KR AE L  L+P+ S  Y LL NIY+  G       VRELM +  + 
Sbjct: 635 LSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVK 694

Query: 741 KDPAYS 746
           K+PA S
Sbjct: 695 KEPALS 700



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 254/514 (49%), Gaps = 53/514 (10%)

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
           CK  +L FA +LFD MPERN++S+N+LIS   + G  E+A+ ++ +           T A
Sbjct: 93  CKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYA 152

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
                     D++ G   HGLV+  GL + +++ N L+ +Y+KCG    A+ +F+   E 
Sbjct: 153 GALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER 212

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           ++V++ +++SG  +     E L +   M R  +++ + +L SVL  C    C   ++ F 
Sbjct: 213 DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC----CINLNEGFI 268

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           +          G  +HC T KLG E D+ +  +LLDMYAKNG +  A  +FS +P ++VV
Sbjct: 269 EK---------GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVV 319

Query: 305 SWNVMIAGYGQKYQ-----STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           ++N MI+G+ Q  +     S++A +L   M+  G EP   T   +L AC  +  ++ GR+
Sbjct: 320 TYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQ 379

Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
           +                                   F S     ++SW +M+  + Q+E 
Sbjct: 380 IHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQ 439

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            + A  LFR++    ++P+  T+++++S+CA    L SG+Q+   ++K+       V + 
Sbjct: 440 LESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTS 499

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
            I +Y+K     LA +VF  +   D+  +++MI+ L+ +    EA   F+ M+ + + P 
Sbjct: 500 SISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPN 559

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           Q +F  VL +C       QG +    ++ D  +N
Sbjct: 560 QQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRIN 593



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 207/460 (45%), Gaps = 90/460 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+LLH  ++ NGL    FL N LI++YSKC     A  LFD+   +D  SWN+       
Sbjct: 167 GELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS------- 219

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LIS  VR G  E+ L++  KM  +G   T   L SV
Sbjct: 220 ------------------------LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSV 255

Query: 127 FKASTALLD---VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            KA    L+   +E G   H    K+G++ +I V  ALL +YAK G  K A+ +F  M  
Sbjct: 256 LKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPS 315

Query: 184 PNEVTFTAMMSGLAKTDRVV-----EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            N VT+ AM+SG  + D +      EA ++F  M R+ +     + S VL  C+      
Sbjct: 316 KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSA----- 370

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                A++        +G+Q+H L  K  F++D  + ++L+++YA  G  +     F++ 
Sbjct: 371 -----AKTLE------YGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAST 419

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------- 348
            ++ + SW  MI  + Q  Q   A +L +++ S    P+E T   M+ AC          
Sbjct: 420 SKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE 479

Query: 349 -------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                     +SG++    ++F  + +P V++++AM+SS +Q  
Sbjct: 480 QIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHG 539

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +  EA+ +F  M+  G+KP++     +L +C   G++  G
Sbjct: 540 SANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQG 579



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 156/317 (49%), Gaps = 21/317 (6%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVR-----NGLEEKALSV 107
           DI    A+L    K+  L+ A KLF  MP +NVV++N +IS  ++     +    +A  +
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345

Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
           +  M   G  P+  T + V KA +A   +E+GR+ H L+ K     + ++ +AL+ LYA 
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
            G T+  +  F   S+ +  ++T+M+    + +++  A ++FR +    +  +  ++S +
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           +  CA                 F+    G+Q+    IK G +A   +  S + MYAK+G+
Sbjct: 466 MSACA----------------DFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGN 509

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           M  A  +F  +    V +++ MI+   Q   + +A+ + + MK+ G +P++   + +L+A
Sbjct: 510 MPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569

Query: 348 CVRSGDIKTGREMFDSM 364
           C   G +  G + F  M
Sbjct: 570 CCHGGLVTQGLKYFQCM 586



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 122/307 (39%), Gaps = 49/307 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA I +N    D F+ + LIELY+   +T      F     +DI            
Sbjct: 377 GRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDI------------ 424

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                               SW ++I   V+N   E A  ++ ++ +    P   T++ +
Sbjct: 425 -------------------ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      +  G +  G  IK G+D    V  + +S+YAK G    A  VF E+  P+ 
Sbjct: 466 MSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDV 525

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            T++AM+S LA+     EAL +F  M    +  +  +   VL  C   G   +   + Q 
Sbjct: 526 ATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQC 585

Query: 247 -DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE-VIFSNLPERSVV 304
             N +  N + +   C                L+D+  + G +  AE +I S+  +   V
Sbjct: 586 MKNDYRINPNEKHFTC----------------LVDLLGRTGRLSDAENLILSSGFQDHPV 629

Query: 305 SWNVMIA 311
           +W  +++
Sbjct: 630 TWRALLS 636


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 196/631 (31%), Positives = 323/631 (51%), Gaps = 56/631 (8%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM- 212
           N+   N+ L    K G    A  +F++M+  +E+++T +++G        EAL +F  M 
Sbjct: 56  NMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMW 115

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV-HGQQVHCLTIKLGFEAD 271
           +      D   +S  L  CA    GV              N+  G+ +H  ++K G    
Sbjct: 116 VHPGPQRDQFMISVALKACA---LGV--------------NICFGELLHGFSVKSGLIHS 158

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG-------------YGQKYQ 318
           + +S++L+DMY K G ++    +F  +  R+VVSW  +IAG             + + ++
Sbjct: 159 VFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWR 218

Query: 319 S-------TKAIEL----------------LQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
           S       T AI L                 Q +K  GF+        +     + G   
Sbjct: 219 SKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQ-GFDESSFVINTLATMYNKCGKPD 277

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
               +F+ M  P V SW  ++S+Y Q    + A++ F+ M+   V P++ T A ++SSCA
Sbjct: 278 YVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCA 337

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
            +   + G+Q+H   L+        VA+ +I +YSKC   + A  VFH I   DI+ W++
Sbjct: 338 NLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWST 397

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           +I+  S      EAF +   MR+    P +F+ ++VLS C  ++   QG+QVHA +   G
Sbjct: 398 IISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIG 457

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
             ++  V SA+I MY KCG +  A + F+ M   + ++W  MI+GYA++GY  EA+ L++
Sbjct: 458 IDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFE 517

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
            + + G+KPD + F+ +LTAC+H+G+VD+G   F  M   + + P  +HY C+ID L RA
Sbjct: 518 KISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRA 577

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLA 715
           G   EAE +I  MP   D V+W  LL +CR+H +V   +  AE+L +LDP ++  +  LA
Sbjct: 578 GRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLA 637

Query: 716 NIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           NIY++ GRW +   +R+LM    ++K+  +S
Sbjct: 638 NIYAAKGRWKEAAHIRKLMKSKGVIKERGWS 668



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 236/534 (44%), Gaps = 58/534 (10%)

Query: 24  FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYS------WNAILSAQCKSDDLEFAYKLF 77
           ++ NR I   +        Q    + P ++ YS       N+ L    K   L  A  +F
Sbjct: 21  YISNRYILTGTATECRELIQQPIQEQPAENAYSVHNMLELNSELKQLVKQGQLCKARYMF 80

Query: 78  DEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKASTALLDV 136
           D+M  R+ +SW  LI+  V      +AL +++ M  + G       ++   KA    +++
Sbjct: 81  DKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNI 140

Query: 137 EHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
             G   HG  +K GL  +++V++AL+ +Y K G  +    VFE+M   N V++TA+++GL
Sbjct: 141 CFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGL 200

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
                 +E L  F  M R  V  DS + +  L               A +D+      HG
Sbjct: 201 VHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALK--------------ASADSSLLH--HG 244

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           + +H  TIK GF+    + N+L  MY K G  D    +F  +    VVSW  +I+ Y Q 
Sbjct: 245 KAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQM 304

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------------------- 349
            +   A+E  +RM+     P++ T   ++ +C                            
Sbjct: 305 GEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVA 364

Query: 350 --------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                   + G +K+   +F  +    + SW+ ++S YSQ    KEA      M+  G K
Sbjct: 365 NSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPK 424

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P+   L+ +LS C +M +LE GKQVHA  L      +  V S +I +YSKC   + A ++
Sbjct: 425 PNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKI 484

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
           F+ +   DI+ W +MI G + +    EA   F+++    + P    F  VL++C
Sbjct: 485 FNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTAC 538



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 192/423 (45%), Gaps = 55/423 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   ++ G  + +F+ N L  +Y+KC        LF+KM                 
Sbjct: 244 GKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKM----------------- 286

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        MP+  VVSW  LIS  V+ G EE A+  + +M      P   T A+V
Sbjct: 287 ------------RMPD--VVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAV 332

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             +   L   + G + HG V+++GL   + VAN++++LY+KCG  K A  VF  ++  + 
Sbjct: 333 ISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDI 392

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           ++++ ++S  ++     EA +    M R+    +  +LSSVL VC               
Sbjct: 393 ISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCG-------------- 438

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+QVH   + +G + +  + ++++ MY+K G +  A  IF+ +    ++SW
Sbjct: 439 --SMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISW 496

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             MI GY +   S +AI L +++ S G +PD V  I +L AC  +G +  G   F  M  
Sbjct: 497 TAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTN 556

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               SPS   +  ++    ++    EA  + R M F     D    + +L +C   G ++
Sbjct: 557 VYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFH---TDDVVWSTLLRACRVHGDVD 613

Query: 422 SGK 424
            G+
Sbjct: 614 RGR 616



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/510 (23%), Positives = 226/510 (44%), Gaps = 88/510 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+LLH   +++GL    F+ + LI++Y K                               
Sbjct: 143 GELLHGFSVKSGLIHSVFVSSALIDMYMKVGK---------------------------- 174

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E   ++F++M  RNVVSW  +I+ LV  G   + L  +++M          T A  
Sbjct: 175 ---IEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIA 231

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KAS     + HG+  H   IK G D++ +V N L ++Y KCG   + + +FE+M  P+ 
Sbjct: 232 LKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDV 291

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T ++S   +      A+E F+ M +  VS +  + ++V+  CA              
Sbjct: 292 VSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCA-------------- 337

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+Q+H   ++LG    L ++NS++ +Y+K G + SA ++F  +  + ++SW
Sbjct: 338 --NLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISW 395

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           + +I+ Y Q   + +A + L  M+  G +P+E    ++L  C                  
Sbjct: 396 STIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLC 455

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G ++   ++F+ M    + SW AM++ Y++    +EAI L
Sbjct: 456 IGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINL 515

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESG---KQVHAASLKTASHIDNYVASGLIGI 448
           F ++   G+KPD      +L++C   G+++ G     +     + +   ++Y    LI +
Sbjct: 516 FEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHY--GCLIDL 573

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMI 477
             +  R   AE +   +P   D V W++++
Sbjct: 574 LCRAGRLSEAEHIIRSMPFHTDDVVWSTLL 603


>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
          Length = 691

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 185/626 (29%), Positives = 326/626 (52%), Gaps = 59/626 (9%)

Query: 135 DVEHGRRCHGLVIKIG----LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
           D   GR  HG V++ G    LD  ++ AN LL++Y K G    A  +F+ M E N V+F 
Sbjct: 74  DARGGRAVHGHVVRRGGVGRLD--LFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFV 131

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC-AREGCGVESDVFAQSDNK 249
            ++   A+      A  +FR +  +   ++   L+++L +  A +  G+   V       
Sbjct: 132 TLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGV------- 184

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                     H    KLG + +  + + L+D Y+    +  AE +F+ +  +  V W  M
Sbjct: 185 ----------HSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------------- 349
           ++ Y +      A  +  +M+  G +P+     ++L A V                    
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294

Query: 350 ---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + GDIK  R  F+ +P   V   + M+S Y+QS  +++A +LF  
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +    V P+  +L+ +L +C  M  L+ GKQ+H  ++K     D +V + L+  Y+KC  
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + + ++F  + + + V WN+++ G S + L  EA   F +M+  +M  TQ ++++VL +
Sbjct: 415 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRA 474

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           CA  +S     Q+H  IEK  + ND  +G++LI+ Y KCG I  A + F  +  ++ ++W
Sbjct: 475 CASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISW 534

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I GYA +G   +A+ L+  M  S V+ +DITFVA+L+ CS +GLV+ G+ +F+SM++
Sbjct: 535 NAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRI 594

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           DHG++P ++HYTC++  LGRAG  ++A   I ++P     ++W  LLSSC +H NV L +
Sbjct: 595 DHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 654

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSS 720
            +AE++  ++P++   Y LL+N+Y++
Sbjct: 655 FSAEKILEIEPQDETTYVLLSNMYAA 680



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 256/533 (48%), Gaps = 71/533 (13%)

Query: 224 LSSVLGV----CARE--GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
           L SV GV    CAR+  GC       A+ D +  R VHG  V    +      DL  +N 
Sbjct: 51  LPSVPGVDSFACARQLQGC------IARGDARGGRAVHGHVVRRGGVG---RLDLFCANV 101

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           LL+MY K G + SA  +F  +PER++VS+  ++  + Q+     A  L +R++  G E +
Sbjct: 102 LLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVN 161

Query: 338 EVTSINMLV--------------------------ACVRSGDIKT---------GREMFD 362
           +     ML                           A V SG I              +F+
Sbjct: 162 QFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFN 221

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            +       W AM+S YS+++  + A ++F +M+  G KP+   L  +L +   +  +  
Sbjct: 222 GIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVL 281

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
           GK +H  ++KT +  + +V   L+ +Y+KC   + A   F  IP  D++  + MI+  + 
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           ++ + +AF  F ++ ++ + P ++S ++VL +C  +     G+Q+H    K G+ +D+FV
Sbjct: 342 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 401

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
           G+AL++ Y KC D+  + + F  +   N V+WN ++ G++Q+G G+EA+ ++ +M A+ +
Sbjct: 402 GNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQM 461

Query: 603 KPDDITFVAILTACS------HSGLVDVGVE--IFNSMQLDHGVEPILDHYTCMIDCLGR 654
               +T+ ++L AC+      H+G +   +E   FN+       + ++ +   +ID   +
Sbjct: 462 PCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNN-------DTVIGN--SLIDTYAK 512

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
            G+  +A  +   +  + D + W  ++S   LH     A  A E   R++  N
Sbjct: 513 CGYIRDALKVFQHL-MERDIISWNAIISGYALHGQ---AADALELFDRMNKSN 561



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 149/614 (24%), Positives = 258/614 (42%), Gaps = 90/614 (14%)

Query: 6   AGKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
            G+ +H H++R G     D F  N L+ +Y K     SA+ LFD+MP +++ S+  ++ A
Sbjct: 77  GGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQA 136

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             +  D E A  LF  +       W                         EG       L
Sbjct: 137 HAQRGDFEAAAALFRRL------RW-------------------------EGHEVNQFVL 165

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            ++ K + A+         H    K+G D N +V + L+  Y+ C     A  VF  +  
Sbjct: 166 TTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVR 225

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL--GVCAREGCGVESD 241
            + V +TAM+S  ++ D    A  +F  M       +  +L+SVL   VC          
Sbjct: 226 KDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVC---------- 275

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                       V G+ +H   IK   + + H+  +LLDMYAK GD+  A + F  +P  
Sbjct: 276 --------LPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYD 327

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VR 350
            V+  + MI+ Y Q  Q+ +A EL  R+      P+E +  ++L AC           + 
Sbjct: 328 DVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIH 387

Query: 351 SGDIKTGRE------------------------MFDSMPSPSVSSWNAMLSSYSQSENHK 386
           +  IK G E                        +F S+   +  SWN ++  +SQS   +
Sbjct: 388 NHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGE 447

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA+ +F EMQ   +   + T + +L +CA+   +    Q+H +  K+  + D  + + LI
Sbjct: 448 EALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLI 507

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
             Y+KC     A +VF  + E DI+ WN++I+G +L+    +A   F +M ++ +     
Sbjct: 508 DTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDI 567

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF-D 564
           +F  +LS C+       G  +   +  D G    +   + ++ +  + G +  A QF  D
Sbjct: 568 TFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGD 627

Query: 565 MMHGKNTVTWNEMI 578
           +    + + W  ++
Sbjct: 628 IPSAPSAMVWRALL 641



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 182/375 (48%), Gaps = 28/375 (7%)

Query: 45  LFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKA 104
           L D  PH       A+L    K  D++ A   F+ +P  +V+  + +IS   ++   E+A
Sbjct: 293 LNDTEPHVG----GALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQA 348

Query: 105 LSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL 164
             ++ ++     +P   +L+SV +A T ++ ++ G++ H   IKIG + +++V NAL+  
Sbjct: 349 FELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDF 408

Query: 165 YAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSL 224
           YAKC     ++ +F  + + NEV++  ++ G +++    EAL +F  M    +    V+ 
Sbjct: 409 YAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTY 468

Query: 225 SSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK 284
           SSVL  CA                  +   H  Q+HC   K  F  D  + NSL+D YAK
Sbjct: 469 SSVLRACAST----------------ASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAK 512

Query: 285 NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
            G +  A  +F +L ER ++SWN +I+GY    Q+  A+EL  RM     E +++T + +
Sbjct: 513 CGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVAL 572

Query: 345 LVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           L  C  +G +  G  +FDSM       PS+  +  ++    ++    +A++   ++    
Sbjct: 573 LSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIP--- 629

Query: 400 VKPDRTTLAIILSSC 414
             P       +LSSC
Sbjct: 630 SAPSAMVWRALLSSC 644


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 188/508 (37%), Positives = 277/508 (54%), Gaps = 37/508 (7%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+L+  YAK   ++ A  +F  +P+   VS+N +IA Y ++  +  A +L   M+    +
Sbjct: 78  NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLD 137

Query: 336 PDEVTSINMLVAC---------------------------------VRSGDIKTGREMFD 362
            D  T   ++ AC                                  ++G +K  R +F 
Sbjct: 138 MDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFH 197

Query: 363 SMPSPSVS-SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
            +       SWN+M+ +Y Q     +A++L+ EM  RG+  D  TLA +L++   +  L 
Sbjct: 198 WLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLL 257

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL-AERVFHRIPELDIVCWNSMIAGL 480
            G Q HA  +K+  H +++V SGLI +YSKC    L   +VF  I   D+V WN+MI+G 
Sbjct: 258 GGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGY 317

Query: 481 SL-NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA-QIEKDGYVN 538
           SL   L  EA   F+Q++     P   S   V+S+C+ +SS  QGRQVH   ++ D   N
Sbjct: 318 SLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSN 377

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
            I V +ALI MY KCG++  A+  FD M   NTV++N MI GYAQ+G G +++ L++ M+
Sbjct: 378 RISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRML 437

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
                P +ITF+++L AC+H+G V+ G   FN M+   G+EP   H++CMID LGRAG  
Sbjct: 438 EMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKL 497

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
            EAE LI+ +P       W  LL +CR+H NV LA +AA  L +LDP N+APY +LANIY
Sbjct: 498 SEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIY 557

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYS 746
           S  GR  D  +VR+LM +  + K P  S
Sbjct: 558 SDNGRLQDAASVRKLMRDRGVKKKPGCS 585



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 247/516 (47%), Gaps = 61/516 (11%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK LHA  +++ +   T+L N  + LYSKC    +A+ +FD     +++S+N ++SA  
Sbjct: 26  TGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYA 85

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   +E A++LFDEMP+ + VS+N LI+A  R G  + A  ++ +M          TL+ 
Sbjct: 86  KESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSG 145

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP- 184
           +  A    ++V   R+ H L +  GLD  + V NAL++ Y+K G+ K A  +F  +SE  
Sbjct: 146 IITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDR 203

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +EV++ +M+    +     +ALE++  M  + + +D  +L+SVL              F 
Sbjct: 204 DEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL------------TAFT 251

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK-NGDMDSAEVIFSNLPERSV 303
              +       G Q H   IK G+  + H+ + L+D+Y+K  G M     +F  +    +
Sbjct: 252 NVQDLLG----GLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307

Query: 304 VSWNVMIAGYG-QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------- 348
           V WN MI+GY   +  S +A+E  ++++  G  PD+ + + ++ AC              
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHG 367

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G+++  + +FD+MP  +  S+N+M++ Y+Q     
Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGF 427

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SG 444
           +++ LF+ M      P   T   +L++CA  G +E GK ++   +K    I+      S 
Sbjct: 428 QSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSC 486

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           +I +  +  +   AER+   IP +     W++++  
Sbjct: 487 MIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGA 522



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 257/573 (44%), Gaps = 108/573 (18%)

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K   A  D+  G+  H L IK  +  + Y++N  L LY+KC     A  VF+   + N 
Sbjct: 15  LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG----------- 235
            +F  ++S  AK   V  A ++F  M +     DSVS ++++   AR G           
Sbjct: 75  FSFNTLISAYAKESYVEVAHQLFDEMPQP----DSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 236 ---CGVESDVFAQSDNKFSRNVHG---QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
                ++ D F  S    +  ++    +Q+H L++  G ++ + + N+L+  Y+KNG + 
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190

Query: 290 SAEVIFSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
            A  IF  L E R  VSWN M+  Y Q  + +KA+EL   M   G   D  T  ++L A 
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 349 VRSGD-----------IKTG-------------------------REMFDSMPSPSVSSW 372
               D           IK+G                         R++FD + +P +  W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310

Query: 373 NAMLSSYSQSEN-HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           N M+S YS  E+   EA++ FR++Q  G +PD  +L  ++S+C+ M     G+QVH  +L
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370

Query: 432 K---TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
           K    ++ I   V + LI +YSKC     A+ +F  +PE + V +NSMIAG + + +  +
Sbjct: 371 KLDIPSNRIS--VNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQ 428

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIE 548
           +   F++M + +  PT  +F +VL++CA                  G V D         
Sbjct: 429 SLHLFQRMLEMDFTPTNITFISVLAACA----------------HTGRVED--------- 463

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVT-----WNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
                G IY     F+MM  K  +      ++ MI    + G   EA RL + +      
Sbjct: 464 -----GKIY-----FNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETI---PFD 510

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNS-MQLD 635
           P    + A+L AC   G V++ ++  N  +QLD
Sbjct: 511 PGFFXWSALLGACRIHGNVELAIKAANRLLQLD 543



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 191/373 (51%), Gaps = 28/373 (7%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPE-RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
           NA++++  K+  L+ A ++F  + E R+ VSWN+++ A +++    KAL +Y +M+  G 
Sbjct: 177 NALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGL 236

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK-HAV 175
           +    TLASV  A T + D+  G + H  +IK G  +N +V + L+ LY+KCG       
Sbjct: 237 IVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCR 296

Query: 176 PVFEEMSEPNEVTFTAMMSGLA-KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
            VF+E+S P+ V +  M+SG +   D   EALE FR +       D  SL  V+  C+  
Sbjct: 297 KVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACS-- 354

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD-LHLSNSLLDMYAKNGDMDSAEV 293
                           S    G+QVH L +KL   ++ + ++N+L+ MY+K G++  A+ 
Sbjct: 355 --------------NMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKT 400

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +F  +PE + VS+N MIAGY Q     +++ L QRM    F P  +T I++L AC  +G 
Sbjct: 401 LFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGR 460

Query: 354 IKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
           ++ G+  F+ M       P    ++ M+    ++    EA +L   + F    P     +
Sbjct: 461 VEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPF---DPGFFXWS 517

Query: 409 IILSSCAAMGILE 421
            +L +C   G +E
Sbjct: 518 ALLGACRIHGNVE 530



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 236/492 (47%), Gaps = 56/492 (11%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ +H L IK       +LSN  L +Y+K   + +A  +F +  + +V S+N +I+ Y +
Sbjct: 27  GKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAK 86

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
           +                                     ++   ++FD MP P   S+N +
Sbjct: 87  E-----------------------------------SYVEVAHQLFDEMPQPDSVSYNTL 111

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA-MGILESGKQVHAASLKTA 434
           +++Y++  + + A +LF EM+   +  D  TL+ I+++C   +G++   +Q+HA S+ T 
Sbjct: 112 IAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLI---RQLHALSVVTG 168

Query: 435 SHIDNYVASG--LIGIYSKCQRNELAERVFHRIPE-LDIVCWNSMIAGLSLNSLDIEAFM 491
             +D+YV+ G  LI  YSK    + A R+FH + E  D V WNSM+     +    +A  
Sbjct: 169 --LDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALE 226

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            + +M    +    F+ A+VL++   +     G Q HA++ K GY  +  VGS LI++Y 
Sbjct: 227 LYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYS 286

Query: 552 KCGD-IYGARQFFDMMHGKNTVTWNEMIHGYA-QNGYGDEAVRLYKDMIASGVKPDDITF 609
           KCG  +   R+ FD +   + V WN MI GY+      DEA+  ++ +   G +PDD + 
Sbjct: 287 KCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSL 346

Query: 610 VAILTACSHSGLVDVGVEIFN-SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           V +++ACS+      G ++   +++LD     I  +   +I    + G+  +A+ L D M
Sbjct: 347 VCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVN-NALIAMYSKCGNLRDAKTLFDTM 405

Query: 669 PCKDDPVIWEVLLSSCRLHA----NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRW 724
           P + + V +  +++    H     ++ L +R  E  F   P N    S+LA   +  GR 
Sbjct: 406 P-EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDF--TPTNITFISVLAAC-AHTGRV 461

Query: 725 DDLRAVRELMSE 736
           +D +    +M +
Sbjct: 462 EDGKIYFNMMKQ 473



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 143/311 (45%), Gaps = 48/311 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTH-SAQHLFDKMPHKDIYSWNAILSA 63
           + G   HA ++++G   ++ + + LI+LYSKC       + +FD++ + D+  WN ++S 
Sbjct: 257 LGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMIS- 315

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                     Y L+++                    L ++AL  + ++   G  P   +L
Sbjct: 316 ---------GYSLYED--------------------LSDEALECFRQLQGVGHRPDDCSL 346

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEEMS 182
             V  A + +     GR+ HGL +K+ +  N I V NAL+++Y+KCG  + A  +F+ M 
Sbjct: 347 VCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP 406

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           E N V++ +M++G A+     ++L +F+ M+    +  +++  SVL  CA  G       
Sbjct: 407 EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTG------- 459

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
               D K   N+  Q       K G E +    + ++D+  + G +  AE +   +P + 
Sbjct: 460 -RVEDGKIYFNMMKQ-------KFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDP 511

Query: 302 SVVSWNVMIAG 312
               W+ ++  
Sbjct: 512 GFFXWSALLGA 522



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 4/127 (3%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           SF   L +C        G+ +HA   K       ++ +  + +Y KC  +  AR+ FD  
Sbjct: 10  SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
           H  N  ++N +I  YA+  Y + A +L+ +M     +PD +++  ++ A +  G      
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEM----PQPDSVSYNTLIAAYARRGDTQPAF 125

Query: 627 EIFNSMQ 633
           ++F  M+
Sbjct: 126 QLFLEMR 132


>gi|356510733|ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
          Length = 649

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 226/719 (31%), Positives = 334/719 (46%), Gaps = 143/719 (19%)

Query: 42  AQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLE 101
           A+ LFD M  +D  +WN+++S   +  ++  A +LFDEMP R+VVSWN ++S        
Sbjct: 57  ARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRDVVSWNLIVSG------- 109

Query: 102 EKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANAL 161
                 Y       FV                   E GRR   L+ +    ++    N +
Sbjct: 110 ------YFSCCGSRFV-------------------EEGRRLFELMPQ----RDCVSWNTV 140

Query: 162 LSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDS 221
           +S YAK G    A+ +F  M E N V++ A+++G      V  A+  FR M       DS
Sbjct: 141 ISGYAKNGRMDQALKLFNAMPEHNAVSYNAVITGFLLNGDVESAVGFFRTMPEH----DS 196

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDM 281
            SL +++    R G   E D+ A           G    C     G +  +H  N+L+  
Sbjct: 197 TSLCALISGLVRNG---ELDLAA-----------GILRECGNGDDGKDDLVHAYNTLIAG 242

Query: 282 YAKNGDMDSAEVIFSNLP-------------ERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           Y + G ++ A  +F  +P              R+VVSWN M+  Y               
Sbjct: 243 YGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCY--------------- 287

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                               V++GDI   RE+FD M      SWN ++S Y Q  N +EA
Sbjct: 288 --------------------VKAGDIVFARELFDRMVERDNCSWNTLISCYVQISNMEEA 327

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
            KLFREM      PD  +   I+S  A  G L                            
Sbjct: 328 SKLFREMP----SPDVLSWNSIISGLAQKGDLN--------------------------- 356

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
                   LA+  F R+P  +++ WN++IAG   N     A   F +M+     P + + 
Sbjct: 357 --------LAKDFFERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTL 408

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH- 567
           ++V+S    L   + G+Q+H  + K   + D  + ++LI MY +CG I  A   F+ +  
Sbjct: 409 SSVISVSTGLVDLYLGKQLHQLVTKT-VLPDSPINNSLITMYSRCGAIVDACTVFNEIKL 467

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            K+ +TWN MI GYA +G   EA+ L+K M    + P  ITF+++L AC+H+GLV+ G  
Sbjct: 468 YKDVITWNAMIGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNACAHAGLVEEGWR 527

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F SM  D+G+EP ++H+  ++D LGR G   EA  LI+ MP K D  +W  LL +CR+H
Sbjct: 528 QFKSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLGACRVH 587

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            NV LA  AA+ L RL+P++SAPY LL N+Y++LG+WDD  +VR LM E  + K   YS
Sbjct: 588 NNVELALVAADALIRLEPESSAPYVLLYNMYANLGQWDDAESVRVLMEEKNVKKQAGYS 646



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 159/584 (27%), Positives = 269/584 (46%), Gaps = 86/584 (14%)

Query: 19  LFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ---CKSDDL 70
           LFD     DT   N +I  Y +      A+ LFD+MP +D+ SWN I+S     C S  +
Sbjct: 60  LFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRDVVSWNLIVSGYFSCCGSRFV 119

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
           E   +LF+ MP+R+ VSWN +IS   +NG  ++AL ++N M      P H          
Sbjct: 120 EEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAM------PEH---------- 163

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
                                  N    NA+++ +   G  + AV  F  M E +  +  
Sbjct: 164 -----------------------NAVSYNAVITGFLLNGDVESAVGFFRTMPEHDSTSLC 200

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV--SLSSVLGVCAREGCGVES----DVFA 244
           A++SGL +   +  A  + R         D +  + ++++    + G   E+    DV  
Sbjct: 201 ALISGLVRNGELDLAAGILRECGNGDDGKDDLVHAYNTLIAGYGQRGHVEEARRLFDVIP 260

Query: 245 -------QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                  +   +F RNV                     NS++  Y K GD+  A  +F  
Sbjct: 261 DDDDDGNEGKRRFRRNVVSW------------------NSMMMCYVKAGDIVFARELFDR 302

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           + ER   SWN +I+ Y Q     +A +L + M S    PD ++  +++    + GD+   
Sbjct: 303 MVERDNCSWNTLISCYVQISNMEEASKLFREMPS----PDVLSWNSIISGLAQKGDLNLA 358

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           ++ F+ MP  ++ SWN +++ Y ++E++K AIKLF EMQ  G +PD+ TL+ ++S    +
Sbjct: 359 KDFFERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTLSSVISVSTGL 418

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSM 476
             L  GKQ+H    KT    D+ + + LI +YS+C     A  VF+ I    D++ WN+M
Sbjct: 419 VDLYLGKQLHQLVTKTVLP-DSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAM 477

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHAQIEKDG 535
           I G + +    EA   FK M++ +++PT  +F +VL++CA      +G RQ  + I   G
Sbjct: 478 IGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNACAHAGLVEEGWRQFKSMINDYG 537

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMI 578
               +   ++L+++  + G +  A    + M  K +   W  ++
Sbjct: 538 IEPRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALL 581



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 18/296 (6%)

Query: 6   AGKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           AG ++ A  L + + + D    N LI  Y + +N   A  LF +MP  D+ SWN+I+S  
Sbjct: 290 AGDIVFARELFDRMVERDNCSWNTLISCYVQISNMEEASKLFREMPSPDVLSWNSIISGL 349

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +  DL  A   F+ MP +N++SWN +I+   +N   + A+ ++++M  EG  P   TL+
Sbjct: 350 AQKGDLNLAKDFFERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTLS 409

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV   ST L+D+  G++ H LV K  L  +  + N+L+++Y++CG    A  VF E+   
Sbjct: 410 SVISVSTGLVDLYLGKQLHQLVTKTVLPDSP-INNSLITMYSRCGAIVDACTVFNEIKLY 468

Query: 185 NEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            +V T+ AM+ G A      EALE+F+LM R  +    ++  SVL  CA  G   E    
Sbjct: 469 KDVITWNAMIGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNACAHAGLVEEG--- 525

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                        +Q   +    G E  +    SL+D+  + G +  A  + + +P
Sbjct: 526 ------------WRQFKSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLINTMP 569



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 116/484 (23%), Positives = 213/484 (44%), Gaps = 77/484 (15%)

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           L+ SN  L    ++G +  A  +F ++  R  V+WN MI+GY Q+ +  +A +L   M  
Sbjct: 38  LNQSNKKLSNLIRSGRISEARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPR 97

Query: 332 CGFEPDEVTSINMLV----ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                 +V S N++V    +C  S  ++ GR +F+ MP     SWN ++S Y+++    +
Sbjct: 98  -----RDVVSWNLIVSGYFSCCGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQ 152

Query: 388 AIKLFREMQ--------------------------FRGVKP-DRTTLAIILSSCAAMGIL 420
           A+KLF  M                           FR +   D T+L  ++S     G L
Sbjct: 153 ALKLFNAMPEHNAVSYNAVITGFLLNGDVESAVGFFRTMPEHDSTSLCALISGLVRNGEL 212

Query: 421 ESGKQVHAASLKTASHIDN------YVASGLIGIYSKCQRNELAERVFHRIP-------- 466
           +    + A  L+   + D+      +  + LI  Y +    E A R+F  IP        
Sbjct: 213 D----LAAGILRECGNGDDGKDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNE 268

Query: 467 -----ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
                  ++V WNSM+    + + DI   +F +++    +     S+ T++S   ++S+ 
Sbjct: 269 GKRRFRRNVVSWNSMMM-CYVKAGDI---VFARELFDRMVERDNCSWNTLISCYVQISNM 324

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
            +  ++  ++       D+   +++I    + GD+  A+ FF+ M  KN ++WN +I GY
Sbjct: 325 EEASKLFREMPSP----DVLSWNSIISGLAQKGDLNLAKDFFERMPHKNLISWNTIIAGY 380

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
            +N     A++L+ +M   G +PD  T  ++++    +GLVD+ +       +   V P 
Sbjct: 381 EKNEDYKGAIKLFSEMQLEGERPDKHTLSSVISVS--TGLVDLYLGKQLHQLVTKTVLPD 438

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE--E 699
                 +I    R G   +A  + +E+    D + W  ++     H +      AAE  E
Sbjct: 439 SPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASHGS------AAEALE 492

Query: 700 LFRL 703
           LF+L
Sbjct: 493 LFKL 496



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 113/478 (23%), Positives = 202/478 (42%), Gaps = 87/478 (18%)

Query: 5   VAGKLLHAHILR-NGLFD-----DTFLCNRLIELYSKCNNTH---SAQHLFDKMPHKDIY 55
           ++G +    I R   LFD     D    N ++  Y  C  +      + LF+ MP +D  
Sbjct: 76  ISGYVQRREIARARQLFDEMPRRDVVSWNLIVSGYFSCCGSRFVEEGRRLFELMPQRDCV 135

Query: 56  SWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG 115
           SWN ++S   K+  ++ A KLF+ MPE N VS+N +I+  + NG  E A+  +  M    
Sbjct: 136 SWNTVISGYAKNGRMDQALKLFNAMPEHNAVSYNAVITGFLLNGDVESAVGFFRTMPEHD 195

Query: 116 FVPTHITLASVFKASTALLDVEHG--RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
                  ++ + +     LD+  G  R C       G D  ++  N L++ Y + G  + 
Sbjct: 196 STSLCALISGLVR--NGELDLAAGILRECGNG--DDGKDDLVHAYNTLIAGYGQRGHVEE 251

Query: 174 AVPVFEEMS-------------EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           A  +F+ +                N V++ +MM    K   +V A E+F  M+ +    D
Sbjct: 252 ARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYVKAGDIVFARELFDRMVER----D 307

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
           + S ++++       C V+     ++   F                    D+   NS++ 
Sbjct: 308 NCSWNTLI------SCYVQISNMEEASKLFREMP--------------SPDVLSWNSIIS 347

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
             A+ GD++ A+  F  +P ++++SWN +IAGY +      AI+L   M+  G  PD+ T
Sbjct: 348 GLAQKGDLNLAKDFFERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHT 407

Query: 341 SINMLVACVRSGDIKTGREMFD-----SMP-SP--------------------------- 367
             +++       D+  G+++        +P SP                           
Sbjct: 408 LSSVISVSTGLVDLYLGKQLHQLVTKTVLPDSPINNSLITMYSRCGAIVDACTVFNEIKL 467

Query: 368 --SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
              V +WNAM+  Y+   +  EA++LF+ M+   + P   T   +L++CA  G++E G
Sbjct: 468 YKDVITWNAMIGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNACAHAGLVEEG 525



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 68/365 (18%)

Query: 323 IELLQRMKSCGFEPDEVTSIN---------MLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
           +E L R++ C        + N          L   +RSG I   R +FDSM      +WN
Sbjct: 14  VEQLPRIRCCHVSASPTHNYNSSPLNQSNKKLSNLIRSGRISEARTLFDSMKRRDTVTWN 73

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS---SCAAMGILESGKQVHAAS 430
           +M+S Y Q      A +LF EM  R    D  +  +I+S   SC     +E G+++    
Sbjct: 74  SMISGYVQRREIARARQLFDEMPRR----DVVSWNLIVSGYFSCCGSRFVEEGRRLFELM 129

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE-A 489
            +      N V SG    Y+K  R + A ++F+ +PE + V +N++I G  LN  D+E A
Sbjct: 130 PQRDCVSWNTVISG----YAKNGRMDQALKLFNAMPEHNAVSYNAVITGFLLNG-DVESA 184

Query: 490 FMFFKQMRQNE-----------MYPTQFSFAT-VLSSCAK-----------LSSSFQGRQ 526
             FF+ M +++           +   +   A  +L  C              ++   G  
Sbjct: 185 VGFFRTMPEHDSTSLCALISGLVRNGELDLAAGILRECGNGDDGKDDLVHAYNTLIAGYG 244

Query: 527 VHAQIE-------------------KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
               +E                   K  +  ++   ++++  Y K GDI  AR+ FD M 
Sbjct: 245 QRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYVKAGDIVFARELFDRMV 304

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++  +WN +I  Y Q    +EA +L+++M +    PD +++ +I++  +  G +++  +
Sbjct: 305 ERDNCSWNTLISCYVQISNMEEASKLFREMPS----PDVLSWNSIISGLAQKGDLNLAKD 360

Query: 628 IFNSM 632
            F  M
Sbjct: 361 FFERM 365


>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 215/684 (31%), Positives = 333/684 (48%), Gaps = 71/684 (10%)

Query: 103 KALSVYNKMSNEGFVPTHITLA-SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANAL 161
           +A S Y++M   G   T  TL  S+ KA ++L                G D      N++
Sbjct: 32  EACSRYHQMKKAGAQLTDPTLVHSILKACSSL---------------PGFDSLTSTGNSV 76

Query: 162 LSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDS 221
           L  Y K G    A+ VF+ M   + V++  M+ G        + L  FR     A   + 
Sbjct: 77  LDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNV 136

Query: 222 VSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDM 281
            +L   +  C   G   E                G ++H   I+ GF     + NSLL M
Sbjct: 137 STLVLAIHACRSLGAMEE----------------GLKMHGYIIRSGFLDIPSVQNSLLSM 180

Query: 282 YAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVT 340
           YA N DM+ AE +F  + ER V+SW+VMI GY Q  ++  A++L   M S    E D +T
Sbjct: 181 YADN-DMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGIT 239

Query: 341 SINMLVACVRSGDIKTGREM-----------------------------------FDSMP 365
            +++L AC  +GDI  GR +                                   F+ MP
Sbjct: 240 MVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMP 299

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
             +  SWN+++S   ++E H EA+ LF  M   G + D  TL  +L SC         K 
Sbjct: 300 CRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF 359

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +H+  ++    ++ +V + LI  YSKC   ELA ++F R+   D V W++MIAG +    
Sbjct: 360 IHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGK 419

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             EA   F++M Q +  P   +  ++L + +  +   + +  H    + G   ++ VG+A
Sbjct: 420 PDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTA 479

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           +++MY KCG+I  +R+ FD +  KN V+W  MI     NG   +A+ L  +M   G+KP+
Sbjct: 480 ILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPN 539

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            +T +++L+ACSH GLV+ G+  F +M  DHGVEP L+HY+CM+D L RAG  + A  LI
Sbjct: 540 VVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLI 599

Query: 666 DEMP--CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGR 723
           ++MP   +D   +W  LLS+CR   N RL   AA  +  L+P++SA Y L +++Y++ G 
Sbjct: 600 EKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGL 659

Query: 724 WDDLRAVRELMSENCIVKDPAYSL 747
           W D   +R L+    +     YSL
Sbjct: 660 WADAARMRWLVKARGVRVVAGYSL 683



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 258/546 (47%), Gaps = 54/546 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N++L    K+  L+ A  +FD M  R+ VSWN +I   +  G  +K L  + +     F 
Sbjct: 74  NSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFE 133

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   TL     A  +L  +E G + HG +I+ G      V N+LLS+YA     + A  +
Sbjct: 134 PNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEEL 192

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGC 236
           F+EM E + ++++ M+ G  +T     AL++F  M   A + +D +++ SVL  CA  G 
Sbjct: 193 FDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTG- 251

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                     D    R+VHG     + I  G + DL + NS++DMY+K  D +SA   F+
Sbjct: 252 ----------DISMGRSVHG-----VVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFN 296

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------- 348
            +P R+ VSWN +I+G  +  + ++A+ L   M   GF  DEVT +N+L +C        
Sbjct: 297 EMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQ 356

Query: 349 ---VRSGDIKTGRE------------------------MFDSMPSPSVSSWNAMLSSYSQ 381
              + S  I+ G E                        +FD + +    SW+AM++ ++ 
Sbjct: 357 CKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNH 416

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
                EAI LF+EM     KP+  T+  +L + +    L+  K  H  +++     +  V
Sbjct: 417 CGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAV 476

Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
            + ++ +Y+KC    L+ + F +IPE +IV W +MIA   +N L  +A     +M+ + +
Sbjct: 477 GTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGL 536

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGAR 560
            P   +  +VLS+C+      +G      + +D G    +   S +++M  + G +  A 
Sbjct: 537 KPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAM 596

Query: 561 QFFDMM 566
              + M
Sbjct: 597 NLIEKM 602



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 215/453 (47%), Gaps = 84/453 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H +I+R+G  D   + N L+ +Y+                                
Sbjct: 155 GLKMHGYIIRSGFLDIPSVQNSLLSMYAD------------------------------- 183

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLAS 125
            +D+E A +LFDEM ER+V+SW+ +I   V+ G  + AL ++ +M SN       IT+ S
Sbjct: 184 -NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVS 242

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA     D+  GR  HG+VI  GLD +++V N+++ +Y+KC   + A   F EM   N
Sbjct: 243 VLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRN 302

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ +++SGL +T++  EAL +F  M +     D V+L ++L                Q
Sbjct: 303 TVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLL----------------Q 346

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S   F      + +H + I+ G+E +  + NSL+D Y+K   ++ A  +F  L  +  VS
Sbjct: 347 SCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVS 406

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK---------- 355
           W+ MIAG+    +  +AI L Q M     +P+ VT +++L A   S D+K          
Sbjct: 407 WSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAI 466

Query: 356 -------------------------TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                      R+ FD +P  ++ SW AM+++   +   ++A+ 
Sbjct: 467 RRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALA 526

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           L  EM+  G+KP+  T   +LS+C+  G++E G
Sbjct: 527 LLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEG 559



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 221/455 (48%), Gaps = 67/455 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  ++  GL  D F+ N +I++YSKC                              
Sbjct: 256 GRSVHGVVICRGLDYDLFVGNSIIDMYSKC------------------------------ 285

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            DD E A+K F+EMP RN VSWN++IS LVR     +ALS++  M   GF    +TL ++
Sbjct: 286 -DDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNL 344

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            ++    +D    +  H +VI+ G + N +V N+L+  Y+KC   + A  +F+ +   + 
Sbjct: 345 LQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDT 404

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++AM++G     +  EA+ +F+ M +     + V++ S+L     E   V +D+    
Sbjct: 405 VSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLL-----EAFSVSADL---- 455

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
             K S+  HG     + I+ G  A++ +  ++LDMYAK G++  +   F  +PE+++VSW
Sbjct: 456 --KRSKWAHG-----IAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSW 508

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             MIA  G    +  A+ LL  MK  G +P+ VT++++L AC   G ++ G   F++M  
Sbjct: 509 GAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQ 568

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC------- 414
                P +  ++ M+   S++     A+ L  +M  R ++        +LS+C       
Sbjct: 569 DHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPER-MRDGAGLWGALLSACRSSGNSR 627

Query: 415 ----AAMGILESGKQVHAASLKTASHIDNYVASGL 445
               AA  +LE   Q  A     +S    Y ASGL
Sbjct: 628 LGAGAAFRVLELEPQSSAGYFLASSM---YAASGL 659


>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Vitis vinifera]
          Length = 773

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 191/647 (29%), Positives = 332/647 (51%), Gaps = 52/647 (8%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D+  G+  H  + K+G   + +  N L++LY K      A  VF+EM   N +T+T ++ 
Sbjct: 93  DLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIK 152

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G  + + V     + R M       +  + S +L  C                +     V
Sbjct: 153 GHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQAC----------------DSLENLV 196

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+Q+H   IK GF+ D+ +  SL+ MY++ GD+ +AE ++SNL  + V   N MI+ YG
Sbjct: 197 RGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYG 256

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------------------- 348
           +     KAI +   +   G EP++ T  N++ AC                          
Sbjct: 257 KAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEIS 316

Query: 349 ---------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                    V+ G ++   + F  M   ++ SW A+LS Y ++ N K+A++ F ++   G
Sbjct: 317 VGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELG 376

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V  D    A +L  C+    L  G Q+H   +K     D  V + LI +Y+KC++   A 
Sbjct: 377 VGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSAR 436

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            VFH + + +IV +N++++G  + + + +A   F Q+R  ++ P   +FA +LS  A  +
Sbjct: 437 LVFHSLLDKNIVSFNAILSGY-IGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQA 495

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
              +G+ +HA I K G+  +  VG+A+I MY KCG I  A Q F  M+  ++++WN +I 
Sbjct: 496 CLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVIS 555

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
            YA +G G +A+ L+++M      PD+IT +++L ACS+SGL++ G  +FN M+  +G++
Sbjct: 556 AYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIK 615

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P ++H+ CM+D LGRAG+  EA   I+  P    P++W  L+  C+LH ++   + A++ 
Sbjct: 616 PEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKH 675

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L  L P+ +  Y L++N+Y+  G  ++   VR +M++  + K+   S
Sbjct: 676 LLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSS 722



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/545 (24%), Positives = 249/545 (45%), Gaps = 83/545 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA + + G  +D F  N L+ LY K N    AQ                       
Sbjct: 97  GQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQ----------------------- 133

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +FDEM  RN ++W  LI   ++    E    +  +M   G      T + +
Sbjct: 134 --------SVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVI 185

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A  +L ++  G + HG VIK G D++++V  +L+S+Y++CG    A  V+  ++  + 
Sbjct: 186 LQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDV 245

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
                M+S   K     +A+ +F  ++   +  +  + ++V+  C         D+    
Sbjct: 246 RCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISAC-------NGDI---- 294

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D +  R +HG     + IK G   ++ + N+++ +Y K+G ++ AE  F  + ER++VSW
Sbjct: 295 DVEVLRVLHG-----MCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSW 349

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VR 350
             +++GY +     KA+E   ++   G   D      +L  C                V+
Sbjct: 350 TALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVK 409

Query: 351 SG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
            G                    +++ R +F S+   ++ S+NA+LS Y  ++  ++A+ L
Sbjct: 410 LGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIGAD-EEDAMAL 468

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +++   +KPD  T A +LS  A    L  GK +HA  +KT    +  V + +I +Y+K
Sbjct: 469 FSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAK 528

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
           C     A ++F+ +  LD + WN++I+  +L+    +A + F++M++ E  P + +  +V
Sbjct: 529 CGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSV 588

Query: 512 LSSCA 516
           L +C+
Sbjct: 589 LQACS 593



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 206/455 (45%), Gaps = 85/455 (18%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +H  +++ G  +D F+   LI +YS+C                            
Sbjct: 196 VRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCG--------------------------- 228

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
               DL  A K++  +  ++V   N +IS   + G  EKA+ V+  +   G  P   T  
Sbjct: 229 ----DLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFT 284

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +V  A    +DVE  R  HG+ IK G    I V NA++S+Y K G  + A   F  M E 
Sbjct: 285 NVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGER 344

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++TA++SG  K     +ALE F  ++   V  DS   +++L  C+            
Sbjct: 345 NLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSE----------- 393

Query: 245 QSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                  +N+  G Q+H   +KLG+  D+ +  +L+D+YAK   + SA ++F +L ++++
Sbjct: 394 ------CKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNI 447

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV-----ACVRSGD----- 353
           VS+N +++GY        A+ L  +++    +PD VT   +L      AC+  G      
Sbjct: 448 VSFNAILSGY-IGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAY 506

Query: 354 -IKTGRE------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
            IKTG E                        +F SM      SWNA++S+Y+     ++A
Sbjct: 507 IIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKA 566

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           + LF EM+     PD  T+  +L +C+  G+LE G
Sbjct: 567 LILFEEMKKEEFVPDEITILSVLQACSYSGLLEEG 601



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 144/293 (49%), Gaps = 16/293 (5%)

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
           G L  G+ +HA   K     D +  + L+ +Y K  +   A+ VF  +   + + W ++I
Sbjct: 92  GDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLI 151

Query: 478 AG-LSLNSLDIEAFMFFKQMRQNEMYPTQFSF-----ATVLSSCAKLSSSFQGRQVHAQI 531
            G L +N  D+E+   F+  R  EMY     F     + +L +C  L +  +G Q+H  +
Sbjct: 152 KGHLQVN--DVES--VFRIAR--EMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFV 205

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
            K G+  D+FVG++LI MY +CGD+  A + +  +  K+    N MI  Y + G G++A+
Sbjct: 206 IKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAI 265

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV-EIFNSMQLDHGVEPILDHYTCMID 650
            ++  ++ SG++P+D TF  +++AC  +G +DV V  + + M +  G    +     ++ 
Sbjct: 266 GVFLHLLGSGLEPNDYTFTNVISAC--NGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVS 323

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
              + G   EAE     M  + + V W  LLS    + N + A     ++  L
Sbjct: 324 VYVKHGMLEEAEKSFCGMG-ERNLVSWTALLSGYVKNGNGKKALEGFSQILEL 375



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 33/262 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +++ G   D  +   LI+LY+KC    SA+ +F  +  K+I S+NAILS    
Sbjct: 400 GLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIG 459

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +D                                EE A+++++++      P  +T A +
Sbjct: 460 AD--------------------------------EEDAMALFSQLRLADIKPDSVTFARL 487

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              S     +  G+  H  +IK G + N  V NA++++YAKCG    A  +F  M+  + 
Sbjct: 488 LSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDS 547

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD-VFAQ 245
           +++ A++S  A   +  +AL +F  M ++    D +++ SVL  C+  G   E   +F  
Sbjct: 548 ISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFND 607

Query: 246 SDNKFSRNVHGQQVHCLTIKLG 267
            ++K+      +   C+   LG
Sbjct: 608 MESKYGIKPEIEHFACMVDLLG 629



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 5/119 (4%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK LHA+I++ G   +  + N +I +Y+KC +   A  LF  M + D  SWNA++SA 
Sbjct: 498 VKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAY 557

Query: 65  CKSDDLEFAYKLFDEMPERNVV----SWNNLISALVRNGLEEKALSVYNKM-SNEGFVP 118
                   A  LF+EM +   V    +  +++ A   +GL E+   ++N M S  G  P
Sbjct: 558 ALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKP 616


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 174/530 (32%), Positives = 279/530 (52%), Gaps = 38/530 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ VH      G  ++   S +L +MY K      A  +F  +P R  V+WN ++AGY +
Sbjct: 35  GRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYAR 94

Query: 316 KYQSTKAIELLQRMKS--CGFEPDEVTSINMLVACV------------------------ 349
               + A+E + RM+    G  PD VT +++L AC                         
Sbjct: 95  NGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELV 154

Query: 350 -----------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                      + G ++  R +FD MP  +  SWNAM+  Y+ + N  EA+ LF  M   
Sbjct: 155 NVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQE 214

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           GV     ++   L +C  +G L+  ++VH   ++     +  V + LI  Y+KC+R +LA
Sbjct: 215 GVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLA 274

Query: 459 ERVFHRIPELDI-VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
            +VF+ +      + WN+MI G + N    +A   F +M+   + P  F+  +V+ + A 
Sbjct: 275 AQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVAD 334

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           +S   Q R +H    +     D++V +ALI+MY KCG +  AR+ FD    ++ +TWN M
Sbjct: 335 ISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAM 394

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           IHGY  +G+G  AV L+++M  +G  P++ TF+++L ACSH+GLVD G + F SM+ D+G
Sbjct: 395 IHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYG 454

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           +EP ++HY  M+D LGRAG   EA   I  MP +    ++  +L +C+LH NV LA+ +A
Sbjct: 455 LEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESA 514

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           + +F L P+    + LLANIY++   W D+  VR  M +  + K P +S+
Sbjct: 515 QIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSI 564



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 206/456 (45%), Gaps = 56/456 (12%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T  ++ K   A  D+  GR  H  +   GL      + AL ++Y KC     A  V
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK--AVSIDSVSLSSVLGVCAREG 235
           F+ M   + V + A+++G A+      A+E    M  +      DSV+L SVL  CA   
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACAD-- 131

Query: 236 CGVESDVFAQSDNKFSRNVHG-QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
                          +R +H  ++VH   ++ G +  +++S ++LD Y K G +++A  +
Sbjct: 132 ---------------ARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAV 176

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  +P R+ VSWN MI GY     +T+A+ L  RM   G +  + + +  L AC   G +
Sbjct: 177 FDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYL 236

Query: 355 KTGREMFDSMPSPSVS------------------------------------SWNAMLSS 378
              R + + +    +S                                    SWNAM+  
Sbjct: 237 DEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILG 296

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           ++Q+E  ++A +LF  MQ   V+PD  TL  ++ + A +      + +H  S++     D
Sbjct: 297 FTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQD 356

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
            YV + LI +YSKC R  +A R+F    +  ++ WN+MI G   +     A   F++M+ 
Sbjct: 357 VYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKG 416

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
               P + +F +VL++C+      +G++  A ++KD
Sbjct: 417 TGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKD 452



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 199/464 (42%), Gaps = 85/464 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA +   GL  ++     L  +Y KC     A+                       
Sbjct: 35  GRAVHAQLEARGLASESIASTALANMYFKCRRPADAR----------------------- 71

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE--GFVPTHITLA 124
                   ++FD MP R+ V+WN +++   RNGL   A+    +M  E  G  P  +TL 
Sbjct: 72  --------RVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLV 123

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV  A      +   R  H   ++ GLD+ + V+ A+L  Y KCG  + A  VF+ M   
Sbjct: 124 SVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVR 183

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N V++ AM+ G A      EA+ +F  M+++ V +   S+ + L  C   G   E     
Sbjct: 184 NSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEV---- 239

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSV 303
                       ++VH L +++G  +++ ++N+L+  YAK    D A  +F+ L  +++ 
Sbjct: 240 ------------RRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTR 287

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------- 349
           +SWN MI G+ Q      A  L  RM+     PD  T ++++ A                
Sbjct: 288 ISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGY 347

Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + G +   R +FDS     V +WNAM+  Y      + A
Sbjct: 348 SIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAA 407

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           ++LF EM+  G  P+ TT   +L++C+  G+++ G++  A+  K
Sbjct: 408 VELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKK 451



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 185/363 (50%), Gaps = 25/363 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            A+L A CK   +E A  +FD MP RN VSWN +I     NG   +A++++ +M  EG  
Sbjct: 158 TAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVD 217

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
            T  ++ +  +A   L  ++  RR H L++++GL  N+ V NAL++ YAKC     A  V
Sbjct: 218 VTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQV 277

Query: 178 FEEM-SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           F E+ ++   +++ AM+ G  + +   +A  +F  M  + V  DS +L SV+   A    
Sbjct: 278 FNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVA---- 333

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
               D+   SD   +R +HG      +I+   + D+++  +L+DMY+K G +  A  +F 
Sbjct: 334 ----DI---SDPLQARWIHG-----YSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFD 381

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
           +  +R V++WN MI GYG       A+EL + MK  G  P+E T +++L AC  +G +  
Sbjct: 382 SARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDE 441

Query: 357 GREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           G++ F SM       P +  +  M+    ++    EA    + M    ++P  +    +L
Sbjct: 442 GQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMP---IEPGISVYGAML 498

Query: 412 SSC 414
            +C
Sbjct: 499 GAC 501



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 161/351 (45%), Gaps = 17/351 (4%)

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P   T   +L  CAA   L +G+ VHA         ++  ++ L  +Y KC+R   A RV
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE--MYPTQFSFATVLSSCAKLS 519
           F R+P  D V WN+++AG + N L   A     +M+  E    P   +  +VL +CA   
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +    R+VHA   + G    + V +A+++ YCKCG +  AR  FD M  +N+V+WN MI 
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GYA NG   EA+ L+  M+  GV   D + +A L AC   G +D  V   + + +  G+ 
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLD-EVRRVHELLVRVGLS 252

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
             +     +I    +      A  + +E+  K   + W  ++    L          AE 
Sbjct: 253 SNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMI----LGFTQNECPEDAER 308

Query: 700 LF-RLDPKNSAPYSL--------LANIYSSL-GRWDDLRAVRELMSENCIV 740
           LF R+  +N  P S         +A+I   L  RW    ++R  + ++  V
Sbjct: 309 LFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYV 359



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 7/178 (3%)

Query: 32  LYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
           L ++  + +S +H  D+    D+Y   A++    K   +  A +LFD   +R+V++WN +
Sbjct: 339 LQARWIHGYSIRHQLDQ----DVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAM 394

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK-IG 150
           I     +G  + A+ ++ +M   G +P   T  SV  A +    V+ G++    + K  G
Sbjct: 395 IHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYG 454

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EPNEVTFTAMMSGLAKTDRVVEALE 207
           L+  +     ++ L  + G    A    + M  EP    + AM+ G  K  + VE  E
Sbjct: 455 LEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAML-GACKLHKNVELAE 511


>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 703

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 188/609 (30%), Positives = 313/609 (51%), Gaps = 50/609 (8%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLY-AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
           G + H L + +GL ++  +   LLS+Y +       A  V  + + P  + +  ++S   
Sbjct: 92  GVQLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPSAASVAADSTLP--LPYNVLISSCL 149

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
           +    ++AL  ++ M +  V  D  +  SVL  CA                +    V G+
Sbjct: 150 RHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACA----------------EARELVLGR 193

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
            VH      G + +L   N+L+ MYAK GD+ SA  +F  + +R VVSWN MI+ Y    
Sbjct: 194 AVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVG 253

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
           Q  +A+EL +RM+  G E + VT                               WN +  
Sbjct: 254 QWAEAMELFRRMRDEGTEVNSVT-------------------------------WNTIAG 282

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y Q  +++ A+ L REM   G + D  TL I L++C+ +G L  GK++H  +++     
Sbjct: 283 GYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQ 342

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
              V++ LI +Y++C+  E A  +F  +    +V WN+M++  +L+    EA   F++M 
Sbjct: 343 VESVSNALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMI 402

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
              + P   +  T L+ CA++++   G+++H  I K G+     + ++LI+MY K G + 
Sbjct: 403 CRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLS 462

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A+  FD M   + +++  MI GY   G G  A+RL++ MI SG+KPD I  V +L+ACS
Sbjct: 463 VAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACS 522

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           HSGLV  G E+FN M + +G++P ++HY+CMID   RAG   +AE ++D  P      +W
Sbjct: 523 HSGLVLEGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMW 582

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
             L+ +C    N+ + +RAA +L  +  +N+  Y L+AN+Y++ G WD+L  VR+LM + 
Sbjct: 583 AALVGACHDRGNIEIGERAARKLLEMRTENAGHYVLIANMYAAAGCWDELATVRKLMRDL 642

Query: 738 CIVKDPAYS 746
            + K P  +
Sbjct: 643 GVTKAPGLA 651



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 222/430 (51%), Gaps = 28/430 (6%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +H H    G+  + F  N L+ +Y+KC +  SA+ +FD M  +D+ SWN+++S+ 
Sbjct: 190 VLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSY 249

Query: 65  CK----SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
                 ++ +E   ++ DE  E N V+WN +    ++      A+ +  +M   G    +
Sbjct: 250 AAVGQWAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDY 309

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           +TL     A + +  +  G+  HGL +++  D+   V+NAL+++YA+C   + A  +F  
Sbjct: 310 VTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRM 369

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           +  P  VT+  M+S  A +D   EA  +FR MI + V  + V++ + L +CAR       
Sbjct: 370 LECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCAR------- 422

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                     +   HGQ++H   +K GF+    L NSL+DMY+K+G +  A+ +F  + +
Sbjct: 423 ---------VANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDD 473

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
             ++S+  MIAGYG + + T A+ L ++M   G +PD +  + +L AC  SG +  G E+
Sbjct: 474 CDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEEL 533

Query: 361 FDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
           F+ M       P +  ++ M+  Y+++   ++A ++     F    P  T  A ++ +C 
Sbjct: 534 FNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPF---PPTSTMWAALVGACH 590

Query: 416 AMGILESGKQ 425
             G +E G++
Sbjct: 591 DRGNIEIGER 600



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 205/438 (46%), Gaps = 59/438 (13%)

Query: 86  VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGL 145
           + +N LIS+ +R+GL  +AL+ Y +M   G +P   T  SV +A     ++  GR  H  
Sbjct: 139 LPYNVLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMH 198

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
               G+D N++  NAL+S+YAKCG    A  VF+ M + + V++ +M+S  A   +  EA
Sbjct: 199 AAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEA 258

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLG----------------VCAREGCGVESDVFAQSDNK 249
           +E+FR M  +   ++SV+ +++ G                   R G  V+        N 
Sbjct: 259 MELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNA 318

Query: 250 FSRNVH---GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
            SR      G+++H L +++  +    +SN+L+ MYA+  DM+ A ++F  L    VV+W
Sbjct: 319 CSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTW 378

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
           N M++ +     + +A  + + M   G +P+ VT +  L  C R  +++ G+E+      
Sbjct: 379 NTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVK 438

Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                        FD+M    + S+ +M++ Y        A++L
Sbjct: 439 HGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRL 498

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH---AASLKTASHIDNYVASGLIGI 448
           F +M   G+KPD   +  +LS+C+  G++  G+++      S      +++Y  S +I +
Sbjct: 499 FEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHY--SCMIDL 556

Query: 449 YSKCQRNELAERVFHRIP 466
           Y++    E AE +    P
Sbjct: 557 YARAGLLEKAEEMLDHTP 574



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 135/326 (41%), Gaps = 43/326 (13%)

Query: 398 RGVKPDRTTLAIILSSCAAM-----GILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           R + P   T  ++L   AA+       L  G Q+HA SL         +   L+ +Y+  
Sbjct: 62  RHLPPAAGTSHLLLRPVAALLHHHRSHLRLGVQLHALSLSLGLSRHPILLPRLLSVYTS- 120

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
             + L             + +N +I+    + L ++A   +++M +N + P  F++ +VL
Sbjct: 121 HPSLLPSAASVAADSTLPLPYNVLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVL 180

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
            +CA+      GR VH      G   ++F  +AL+ MY KCGD+  AR+ FD M  ++ V
Sbjct: 181 RACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVV 240

Query: 573 TWNEMIHGYAQNGYGDEAVRLY-----------------------------------KDM 597
           +WN MI  YA  G   EA+ L+                                   ++M
Sbjct: 241 SWNSMISSYAAVGQWAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREM 300

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
           +  G + D +T V  L ACS  G + +G EI + + +    + +      +I    R   
Sbjct: 301 VRGGAEVDYVTLVIGLNACSRVGWLRLGKEI-HGLAVRMCCDQVESVSNALITMYARCKD 359

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSS 683
              A ML   + C    V W  +LSS
Sbjct: 360 MECARMLFRMLECP-GVVTWNTMLSS 384


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 204/700 (29%), Positives = 371/700 (53%), Gaps = 81/700 (11%)

Query: 103 KALSVYNKMSNEGFVPTH----ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVA 158
           KA++  N    E    TH    IT + + K      +   G+  H  +    L  +  + 
Sbjct: 34  KAITTLNLTDTE---STHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLL 90

Query: 159 NALLSLYAKCGWTKHAVPVFEEM--SEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRK 215
           N+L++LY+K      A  +F+ M  S+ + V++++++S  A     ++A+EMF +L+++ 
Sbjct: 91  NSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQD 150

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHL 274
            V  +    ++V+  C + G       F ++         G  +    +K G F++ + +
Sbjct: 151 GVYPNEYCFTAVIRACLKGG-------FFKT---------GLCLFGFVLKTGYFDSHVCV 194

Query: 275 SNSLLDMYAKN---GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL-LQRMK 330
              L+DM+ K     D++SA  +F  + E++VV+W +MI    Q   + +AI+L L+ + 
Sbjct: 195 GCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLV 254

Query: 331 SCGFEPDEVTSINMLVAC----------------VRSG---DIKTG-------------- 357
           S G+ PD  T   ++  C                +RSG   D+  G              
Sbjct: 255 SSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQ 314

Query: 358 --REMFDSMPSPSVSSWNAMLSSYSQSEN--HKEAIKLFREMQFRG-VKPDRTTLAIILS 412
             R++FD M   +V SW A+++ Y +      +EA+++F  M  +G V P+  T + +L 
Sbjct: 315 EARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLK 374

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +CA++   + G+QVH  ++K      + V +GL+ +Y+K  R E A + F      D++ 
Sbjct: 375 ACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCF------DVLF 428

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQM---RQNEMYPT---QFSFATVLSSCAKLSSSFQGRQ 526
             ++++   ++  +++ F    +    R+ E   +    F++A++LS  A + +  +G Q
Sbjct: 429 EKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQ 488

Query: 527 VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           +HA + K G+  D+ V +ALI MY KCG+   A Q F+ M   N +TW  +I+G+A++G+
Sbjct: 489 IHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGF 548

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
             +A+ L+ +M+ +GVKP+D+T++A+L+ACSH GL+D   + F SM+ +HG+ P ++HY 
Sbjct: 549 ASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYA 608

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK 706
           CM+D LGR+G   EA   I+ MP   D ++W   L SCR+H N +L + AA+ +   +P 
Sbjct: 609 CMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPH 668

Query: 707 NSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + A Y LL+N+Y++ GRW+D+ A+R+ M +  I K+   S
Sbjct: 669 DPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSS 708



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 145/560 (25%), Positives = 245/560 (43%), Gaps = 90/560 (16%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           K  H+ GKLLH  +  + L  DT L N LI LYSK N+  +A  +F  M           
Sbjct: 66  KNTHL-GKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM----------- 113

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK-MSNEGFVPT 119
                             E  +R+VVS++++IS    N    KA+ ++++ +  +G  P 
Sbjct: 114 ------------------ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPN 155

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAK-CGWT--KHAV 175
                +V +A       + G    G V+K G  D ++ V   L+ ++ K C     + A 
Sbjct: 156 EYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESAR 215

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCARE 234
            VF++M E N VT+T M++ LA+     EA+++F  +++      D  +L+ ++ VCA  
Sbjct: 216 KVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCA-- 273

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
               E    +           G+++H   I+ G   DL +  SL+DMYAK G +  A  +
Sbjct: 274 ----EIQFLSL----------GKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKV 319

Query: 295 FSNLPERSVVSWNVMIAGY---GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
           F  + E +V+SW  ++ GY   G  Y+          +   G  P+  T   +L AC   
Sbjct: 320 FDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASL 379

Query: 352 GDIKTGREMFDSMPSPSVSS----WNAMLSSYSQSENHKEAIKLF--------------- 392
            D   G ++        +S+     N ++S Y++S   + A K F               
Sbjct: 380 PDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVD 439

Query: 393 ----------------REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
                           RE+++ G      T A +LS  A +G +  G+Q+HA  +K    
Sbjct: 440 DTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFR 499

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D  V + LI +YSKC   E A +VF+ + + +++ W S+I G + +    +A   F  M
Sbjct: 500 TDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNM 559

Query: 497 RQNEMYPTQFSFATVLSSCA 516
            +  + P   ++  VLS+C+
Sbjct: 560 LETGVKPNDVTYIAVLSACS 579



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 194/416 (46%), Gaps = 58/416 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH+ ++R+GL  D  +   L+++Y+KC     A+                       
Sbjct: 281 GKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEAR----------------------- 317

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVR--NGLEEKALSVYNKMSNEGFV-PTHITL 123
                   K+FD M E NV+SW  L++  VR   G E +A+ +++ M  +G V P   T 
Sbjct: 318 --------KVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTF 369

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           + V KA  +L D + G + HG  IK+GL     V N L+S+YAK G  + A   F+ + E
Sbjct: 370 SGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFE 429

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N V+ T +     K   +    ++ R +      + S + +S+L   A  G   +    
Sbjct: 430 KNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGK---- 485

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+Q+H + +K+GF  DL ++N+L+ MY+K G+ ++A  +F+++ + +V
Sbjct: 486 ------------GEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNV 533

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           ++W  +I G+ +   ++KA+EL   M   G +P++VT I +L AC   G I    + F S
Sbjct: 534 ITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTS 593

Query: 364 MPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           M       P +  +  M+    +S    EAI+    M F     D       L SC
Sbjct: 594 MRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPF---DADALVWRTFLGSC 646



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 199/407 (48%), Gaps = 56/407 (13%)

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITL 123
           C   DLE A K+FD+M E+NVV+W  +I+ L + G  ++A+ ++ +M  + G+VP   TL
Sbjct: 206 CSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTL 265

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
             +      +  +  G+  H  VI+ GL  ++ V  +L+ +YAKCG  + A  VF+ M E
Sbjct: 266 TGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMRE 325

Query: 184 PNEVTFTAMMSGLAKTDRVV--EALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            N +++TA+++G  +       EA+ MF  ++++  V+ +  + S VL  CA        
Sbjct: 326 HNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACA-------- 377

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
              +  D  F   VHGQ     TIKLG  A   + N L+ +YAK+G M+SA   F  L E
Sbjct: 378 ---SLPDFDFGEQVHGQ-----TIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFE 429

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML--VACV--------- 349
           +++VS  V+     + +      +L + ++  G      T  ++L   AC+         
Sbjct: 430 KNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQI 489

Query: 350 ------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G+ +   ++F+ M   +V +W ++++ +++    
Sbjct: 490 HAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFA 549

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
            +A++LF  M   GVKP+  T   +LS+C+ +G+++   + H  S++
Sbjct: 550 SKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWK-HFTSMR 595


>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
 gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 209/816 (25%), Positives = 383/816 (46%), Gaps = 126/816 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH+++++ G          L+ +Y+KC        LFD+    D   WN +LS   +
Sbjct: 56  GKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSR 115

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLAS 125
           S               +N                +   + V+  M + G V P+ +T+A+
Sbjct: 116 SG--------------KN----------------DADVMKVFRAMHSSGEVMPSSVTIAT 145

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK-HAVPVFEEMSEP 184
           V        ++  G+  HG VIK G + + +  NAL+S+YAKCG     A  VF+ +   
Sbjct: 146 VLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHK 205

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ AM++GLA+   + EA  +F LM++ +V  +  +++++L VCA            
Sbjct: 206 DVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCA------------ 253

Query: 245 QSDNKFSRNVH---GQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                F  N+    G+Q+H   ++     AD+ + N+LL  Y K G    AE +F  +  
Sbjct: 254 ----SFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDA 309

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGRE 359
           R +VSWN +IAGY    +  K++ +   + S      D VT +++L AC +  +++ G++
Sbjct: 310 RDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQ 369

Query: 360 M------------------------------------FDSMPSPSVSSWNAMLSSYSQSE 383
           +                                    F  +    + SWN++L ++ +  
Sbjct: 370 VHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKR 429

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI---DNY 440
           +H   + L   M    ++PD  T+  I+  CA++  ++  K++H  S+++ S +      
Sbjct: 430 HHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPT 489

Query: 441 VASGLIGIYSKCQRNELAERVFHRI--------------------------------PEL 468
           V + ++  YSKC   E A ++F  +                                 E 
Sbjct: 490 VGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSET 549

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
           D+  WN M+   + N    +A   F +++   M P   +  +++  C +++S    RQ H
Sbjct: 550 DLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCH 609

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
             I +  +  D+ +   L++ Y KCG I  A + F     K+ V +  MI GYA +G  +
Sbjct: 610 GYIIRSSF-EDLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSE 668

Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
           +A+  +  M+  G+KPD + F +IL+ACSH+G +  G++IF+S++  HG++P ++ + C+
Sbjct: 669 KALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACV 728

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           +D L R GH  EA   + ++P + +  IW  LL +C+ +  V L +  A++LF+++  + 
Sbjct: 729 VDLLARGGHVSEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDI 788

Query: 709 APYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
             Y +L+N+Y++  RWD +  VR++M  N  +K PA
Sbjct: 789 GNYIVLSNLYAADDRWDGVMEVRKMM-RNKDLKKPA 823



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 160/647 (24%), Positives = 278/647 (42%), Gaps = 104/647 (16%)

Query: 86  VSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           ++W + I +L  +    +ALS ++     +  F P H  LA++ K+ +ALL    G+  H
Sbjct: 1   MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLH 60

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV- 202
             V+K G       + ALL++YAKCG       +F++    + V +  ++SG +++ +  
Sbjct: 61  SYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKND 120

Query: 203 VEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVH 260
            + +++FR M     V   SV++++VL VCAR G                 N++ G+ VH
Sbjct: 121 ADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSG-----------------NLNGGKSVH 163

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMD-SAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
              IK GFE D    N+L+ MYAK G +   A  +F ++  + VVSWN MIAG  +    
Sbjct: 164 GYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLL 223

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVAC------------------------------- 348
            +A  L   M     +P+  T  N+L  C                               
Sbjct: 224 KEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSV 283

Query: 349 --------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM-QFRG 399
                   ++ G  K    +F +M +  + SWN +++ Y+ +    +++ +F  +     
Sbjct: 284 CNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEM 343

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI-DNYVASGLIGIYSKCQRNELA 458
           +  D  T+  IL +CA +  L++GKQVHA  L+      D    + L+  Y+KC   E A
Sbjct: 344 LLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEA 403

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
              F  I   D++ WNS++                  M + ++ P   +  T++  CA L
Sbjct: 404 YHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASL 463

Query: 519 SSSFQGRQVHAQIEKDGYV---NDIFVGSALIEMYCKCGDI------------------- 556
               + +++H    + G +       VG+A+++ Y KCG+I                   
Sbjct: 464 LRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTC 523

Query: 557 -------------YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
                        Y A   F  M   +  TWN M+  YA+N   ++A+ L+  +   G+K
Sbjct: 524 NSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMK 583

Query: 604 PDDITFVAILTACSHSGLVDV-----GVEIFNSMQLDHGVEPILDHY 645
           PD +T ++++  C+    V +     G  I +S +  H    +LD Y
Sbjct: 584 PDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFEDLHLKGTLLDAY 630



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 209/479 (43%), Gaps = 95/479 (19%)

Query: 6   AGKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           AGK +HA+ILR+  LF+DT   N L+  Y+KC                            
Sbjct: 366 AGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGY-------------------------- 399

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                +E AY  F  +  ++++SWN+++ A        + LS+ + M      P  +T+ 
Sbjct: 400 -----IEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTIL 454

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIG---LDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           ++     +LL V+  +  HG  I+ G         V NA+L  Y+KCG  ++A  +F+ +
Sbjct: 455 TIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNL 514

Query: 182 SEP-NEVTFTAMM----------------SGLAKTDRVV---------------EALEMF 209
           SE  N VT  +++                SG+++TD                  +ALE+F
Sbjct: 515 SEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELF 574

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGF 268
             +  + +  D V++ S++ VC +                   +VH  +Q H   I+  F
Sbjct: 575 LKLQTQGMKPDVVTIMSLIPVCTQMA-----------------SVHLLRQCHGYIIRSSF 617

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           E DLHL  +LLD YAK G +  A  IF +  ++ +V +  MI GY     S KA+E    
Sbjct: 618 E-DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSH 676

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSE 383
           M + G +PD V   ++L AC  +G I  G ++FDS+       P++  +  ++   ++  
Sbjct: 677 MLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGG 736

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT-ASHIDNYV 441
           +  EA     ++    ++ +      +L +C     +E G+ V     K  A+ I NY+
Sbjct: 737 HVSEAYSFVTKIP---IEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYI 792



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/480 (22%), Positives = 207/480 (43%), Gaps = 87/480 (18%)

Query: 3   AHVAGKLLHAHILR-NGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           AH  G+ +H+++L+   L  D  +CN L+  Y K   T  A+ LF  M  +D+ SWN I+
Sbjct: 260 AHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTII 319

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY-NKMSNEGFVPTH 120
           +           Y L                     NG   K+L V+ N +S E  +   
Sbjct: 320 A----------GYAL---------------------NGEWLKSLHVFGNLVSLEMLLLDS 348

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           +T+ S+  A   L +++ G++ H  +++   L ++    NAL+S YAKCG+ + A   F 
Sbjct: 349 VTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFS 408

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA------- 232
            +S  + +++ +++    +       L +  +M++  +  DSV++ +++  CA       
Sbjct: 409 MISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKK 468

Query: 233 ---------REG---CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
                    R G   C     V     + +S+  + +  + +   L  + +L   NSL+ 
Sbjct: 469 VKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLIS 528

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
            Y   G    A +IFS + E  + +WN+M+  Y +     +A+EL  ++++ G +PD VT
Sbjct: 529 GYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVT 588

Query: 341 SINMLVAC----------------VRS------------------GDIKTGREMFDSMPS 366
            ++++  C                +RS                  G I    ++F S   
Sbjct: 589 IMSLIPVCTQMASVHLLRQCHGYIIRSSFEDLHLKGTLLDAYAKCGIIGYAYKIFQSSVD 648

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
             +  + AM+  Y+     ++A++ F  M   G+KPD      ILS+C+  G +  G ++
Sbjct: 649 KDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKI 708


>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 222/740 (30%), Positives = 378/740 (51%), Gaps = 75/740 (10%)

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHIT 122
           C+   L  A +LFD +P  + V WN +I  LV N   ++AL  Y+ M  S+        T
Sbjct: 15  CQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYT 74

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC-----------GWT 171
            +SV KA     ++  G+  H   ++  ++ +  V N+LL++Y+ C           G++
Sbjct: 75  YSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYS 134

Query: 172 KHAV--PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
           +  +   VF+ M +   V +  +++   +T+R  EA++ F +M++  +    VS  +V  
Sbjct: 135 RCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFP 194

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA--DLHLSNSLLDMYAKNGD 287
             +  G           D K +  VHG     + +KLG E   DL++ +S + MYA+ G 
Sbjct: 195 AFSSLG-----------DFKNANVVHG-----MLVKLGSEYVNDLYVVSSAIFMYAELGC 238

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL-QRMKSCGFEPDEVTSINMLV 346
           ++ A+ +F N  ER+   WN MI+ + Q   S + I+L  Q ++S     DEVT ++ + 
Sbjct: 239 LEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAIS 298

Query: 347 A--------------------------CV---------RSGDIKTGREMFDSMPSPSVSS 371
           A                          CV         R   I T  ++FD+MP   V S
Sbjct: 299 AASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVS 358

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           WN M+S++ Q+  + EA+ LF EM+ + +  D  T+  +LS+ + +   + GKQ H   L
Sbjct: 359 WNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLL 418

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRI--PELDIVCWNSMIAGLSLNSLDIEA 489
           +     +  + S LI +Y+K    E A+ VF +    E D   WNSM++G + N L  +A
Sbjct: 419 RNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQA 477

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
           F+  +QM   ++ P   + A++L +C        G+Q+H    ++    ++FV +ALI+M
Sbjct: 478 FLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDM 537

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y K G I  A   F   + K+ VT++ MI GY Q+G G+ A+ ++  M  SG++PD +T 
Sbjct: 538 YSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTL 597

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           VA+L+ACS++GLVD G++IF SM+  + ++P  +H+ C+ D LGRAG   +A   +  + 
Sbjct: 598 VAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLG 657

Query: 670 CKDDPV-IWEVLLSSCRLHANVRLAKRAAEELFRLDPKN--SAPYSLLANIYSSLGRWDD 726
            K + + IW  LL++CR+H    L K  A++L  ++  N  +  + LL+NIY+    W++
Sbjct: 658 EKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWEN 717

Query: 727 LRAVRELMSENCIVKDPAYS 746
           +  VR+ M E  + K+   S
Sbjct: 718 VDIVRKQMRERGLKKETGSS 737



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 264/562 (46%), Gaps = 73/562 (12%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK +HAH LR  +     + N L+ +YS C++T                    ++S  
Sbjct: 89  VVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPD---------------GKMVSGY 133

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            + D      K+FD M +R VV+WN LI+  VR     +A+  ++ M   G  P+ ++  
Sbjct: 134 SRCD---LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFV 190

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLD--KNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           +VF A ++L D ++    HG+++K+G +   ++YV ++ + +YA+ G  + A  VF+   
Sbjct: 191 NVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCL 250

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESD 241
           E N   +  M+S   + +  +E +++F   +  +  +ID V+L S +             
Sbjct: 251 ERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISA----------- 299

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
             A    KF      +Q+H   IK      + + N+L+ MY++   +D++  IF N+PE+
Sbjct: 300 --ASHLQKFEL---AEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEK 354

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
            VVSWN MI+ + Q   + +A+ L   MK      D VT   +L A              
Sbjct: 355 DVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTH 414

Query: 349 ---------------------VRSGDIKTGREMFDSMPS--PSVSSWNAMLSSYSQSENH 385
                                 +SG I+  + +F+   S     ++WN+M+S Y+Q+   
Sbjct: 415 GYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLV 474

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            +A  + R+M  + V P+  TLA IL +C   G ++ GKQ+H  S++     + +VA+ L
Sbjct: 475 DQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATAL 534

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YSK      AE VF +  E  IV +++MI G   + +   A   F +M+++ + P  
Sbjct: 535 IDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDA 594

Query: 506 FSFATVLSSCAKLSSSFQGRQV 527
            +   VLS+C+      +G Q+
Sbjct: 595 VTLVAVLSACSYAGLVDEGLQI 616



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 191/357 (53%), Gaps = 50/357 (14%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LHA +++N       + N LI +YS+CN+                               
Sbjct: 312 LHAFVIKNVAVTQVCVMNALIAMYSRCNS------------------------------- 340

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           ++ ++K+FD MPE++VVSWN +ISA V+NGL ++AL ++ +M  +  +   +T+ ++  A
Sbjct: 341 IDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSA 400

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE--MSEPNEV 187
           ++ L + + G++ HG +++ G+     + + L+ +YAK G  + A  VFE+    E ++ 
Sbjct: 401 ASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQA 459

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           T+ +MMSG  +   V +A  + R M+ + V  + V+L+S+L  C   G            
Sbjct: 460 TWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSG------------ 507

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G+Q+H  +I+   + ++ ++ +L+DMY+K+G +  AE +FS   E+S+V+++
Sbjct: 508 ----YIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYS 563

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
            MI GYGQ      A+ +  RM+  G +PD VT + +L AC  +G +  G ++F+SM
Sbjct: 564 TMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESM 620



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 167/368 (45%), Gaps = 31/368 (8%)

Query: 341 SINM---LVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
           SIN+   L    + G +   R++FD++P PS   WN ++     +    EA+  +  M+ 
Sbjct: 4   SINLVHELCRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKS 63

Query: 398 RG--VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC--- 452
               VK D  T + +L +CA    L  GK VHA  L+   +    V + L+ +YS C   
Sbjct: 64  SSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSST 123

Query: 453 ----------QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
                      R +L  +VF  + +  +V WN++IA         EA   F  M +  + 
Sbjct: 124 TPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIK 183

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG--YVNDIFVGSALIEMYCKCGDIYGAR 560
           P+  SF  V  + + L        VH  + K G  YVND++V S+ I MY + G +  A+
Sbjct: 184 PSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAK 243

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS-GVKPDDITFVAILTACSHS 619
           + FD    +NT  WN MI  + QN +  E ++L+   + S     D++T ++ ++A SH 
Sbjct: 244 KVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHL 303

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL----GRAGHFHEAEMLIDEMPCKDDPV 675
              ++  ++   +  +  V  +     C+++ L     R      +  + D MP K D V
Sbjct: 304 QKFELAEQLHAFVIKNVAVTQV-----CVMNALIAMYSRCNSIDTSFKIFDNMPEK-DVV 357

Query: 676 IWEVLLSS 683
            W  ++S+
Sbjct: 358 SWNTMISA 365


>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 202/625 (32%), Positives = 321/625 (51%), Gaps = 57/625 (9%)

Query: 143 HGLVIKIGLDKN---IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           HG  I  GL  +   I++ + L   YA CG    A  +F+++S+P+   + A++      
Sbjct: 102 HGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDK 161

Query: 200 DRVVEALEMFRLMI-RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
               +AL +F  MI       D  +   V+     + C V S +          NV G  
Sbjct: 162 GFHFDALRVFDSMICSGKCWPDKYTFPLVI-----KACSVMSML----------NV-GVL 205

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +H   +  GF +++ + NSLL MY   G +  A  +F+ + +RSVVSWN MI+G+ Q  +
Sbjct: 206 IHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGR 265

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVAC------------------------------ 348
             +A+ +   M     EPD  T ++ L +C                              
Sbjct: 266 PEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNA 325

Query: 349 -----VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                 R G +     +F       V +W +M++ Y  + N K A+ L   MQ  GV P+
Sbjct: 326 LVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPN 385

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             TLA +LS+CA++  L+ GK +HA  ++     D  V + LI +Y+KC     + +VF 
Sbjct: 386 AVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFA 445

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
           +      V WN++++GL  N L  EA   FK M   E+     +F +V+ + A L+   Q
Sbjct: 446 KTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQ 505

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK--NTVTWNEMIHGY 581
              +H+ + + G+++ I V + LI+MY KCG +  A + FD +  K  + + W+ +I GY
Sbjct: 506 VMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGY 565

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
             +G+G+ AV L+  M+ SG++P++ITF ++L ACSH GLVD G+ +F  M  ++   P+
Sbjct: 566 GMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPL 625

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
            +HYTC++D LGRAG   EA  LI  MP + +  IW  LL +C +H NV L + AAE LF
Sbjct: 626 PNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLF 685

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDD 726
            L+P+++  Y LLANIY+++GRW D
Sbjct: 686 ELEPESTGNYILLANIYAAVGRWKD 710



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 235/547 (42%), Gaps = 82/547 (14%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K+LH H + +GL                 N  H   HL             A+  A C  
Sbjct: 99  KILHGHTITSGLLHSP-------------NFIHLPSHL-------------AVSYAFCGC 132

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLASV 126
             +  A KLFD++ + ++  WN +I   V  G    AL V++ M   G   P   T   V
Sbjct: 133 --VPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLV 190

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA + +  +  G   HG  +  G   N++V N+LL++Y  CG    A  VF  M + + 
Sbjct: 191 IKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSV 250

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M+SG  +  R  EAL +F  M+   V  DS ++ S L  C               
Sbjct: 251 VSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGH------------- 297

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G +VH L  K   +  + + N+L+DMY++ G MD A ++F+   E+ V++W
Sbjct: 298 ---LKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITW 354

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
             MI GY     +  A+ L   M+  G  P+ VT  ++L AC     +K G+        
Sbjct: 355 TSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMR 414

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                      ++F          WNA+LS    +E  +EA+ L
Sbjct: 415 KKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGL 474

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+ M    V+ +  T   ++ + A +  L+    +H+  +++       V +GLI +YSK
Sbjct: 475 FKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSK 534

Query: 452 CQRNELAERVFHRIP--ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           C   + A ++F  IP  E DI+ W+ +IAG  ++     A + F QM  + M P + +F 
Sbjct: 535 CGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFT 594

Query: 510 TVLSSCA 516
           +VL +C+
Sbjct: 595 SVLHACS 601



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 186/399 (46%), Gaps = 54/399 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  + +N L +   + N L+++YS+C     A  +F +   KD             
Sbjct: 304 GIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKD------------- 350

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             V++W ++I+  + NG  + AL++   M  +G VP  +TLAS+
Sbjct: 351 ------------------VITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASL 392

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  +L  ++ G+  H  V++  LD ++ V  AL+ +YAKC    ++  VF + S    
Sbjct: 393 LSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRT 452

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + A++SGL   +   EA+ +F+ M+ + V  +  + +SV+   A             +
Sbjct: 453 VPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYA-----------ILA 501

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ERSVV 304
           D K   N+H   V     + GF + + +   L+DMY+K G +D A  IF  +P  E+ ++
Sbjct: 502 DLKQVMNLHSYLV-----RSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDII 556

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
            W+V+IAGYG       A+ L  +M   G +P+E+T  ++L AC   G +  G  +F  M
Sbjct: 557 VWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYM 616

Query: 365 -----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                 SP  + +  ++    ++    EA  L + M F+
Sbjct: 617 IENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQ 655


>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
 gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
          Length = 691

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 205/671 (30%), Positives = 325/671 (48%), Gaps = 91/671 (13%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           ++ G+  H  +IK G   N+Y+A  L+S+YA   +   A  +F+EM   N VT+T M+S 
Sbjct: 19  LKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVKNIVTWTTMVSA 78

Query: 196 LAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
                +  EA++++ R++  K+   +    S VL  C   G   E ++      +FSR  
Sbjct: 79  YTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVG---EIELGRLIHKRFSRE- 134

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF------------------- 295
                         + D+ L N+LLDMY K G +  A  +F                   
Sbjct: 135 ------------NLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGY 182

Query: 296 -------------SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
                        + +P+R+VVSWN +IAG  +   S++A++ + +M   G + D+ T  
Sbjct: 183 FKEGLVEEAVNLFNQMPDRNVVSWNTIIAGLAEN-GSSRALQFVCKMHREGIKLDKFTFP 241

Query: 343 NMLVACVRSGDIKTGRE-----------------------------------MFDSMPS- 366
             L  C  +G +  G++                                   +FD     
Sbjct: 242 CALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGG 301

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                 S+  WN+MLS Y   E ++ A+ +  ++   G   D  TL+  L  C  +  + 
Sbjct: 302 TGSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVR 361

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G QVHA  + +   +D  V S L+ +Y+K    + A ++FHR+P+ DIV W+ ++ G +
Sbjct: 362 LGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCA 421

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
              L+  A   F+ M    +   Q+  + VL  C+ L+S   G+QVHA   K GY  +  
Sbjct: 422 KMELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETEQV 481

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
             +ALI+MY KCG++      F  +  ++ V W  +I G AQNG  +EA+ +++ M+ SG
Sbjct: 482 TITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSG 541

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           +KP+++T++ +LTAC H+GLV     IF +M+ DH +EP L+HY CM+D L +AG+F E 
Sbjct: 542 LKPNEVTYLGVLTACRHAGLVVEAQTIFGTMKCDHRLEPQLEHYYCMVDLLCQAGYFKEV 601

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           E LI EMP K D  IW  +L +C  H N  L    AE L    P + + Y +L+N Y +L
Sbjct: 602 EKLIAEMPFKPDKTIWSSMLGACGTHRNTGLVSTIAENLLANCPNDPSIYVMLSNAYGTL 661

Query: 722 GRWDDLRAVRE 732
           G WD L  VRE
Sbjct: 662 GMWDSLSQVRE 672



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 172/689 (24%), Positives = 295/689 (42%), Gaps = 130/689 (18%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   GK  H+H+++ G   + ++   L+ +Y+                           
Sbjct: 17  KALKQGKSFHSHLIKTGYSHNVYIACNLVSMYA--------------------------- 49

Query: 62  SAQCKSDDLEF---AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFV 117
                  D  F   AYKLFDEMP +N+V+W  ++SA   NG   +A+ +Y +M  ++  V
Sbjct: 50  -------DFTFLIDAYKLFDEMPVKNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEV 102

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P     + V KA   + ++E GR  H    +  LD +I + NALL +Y KCG    A  V
Sbjct: 103 PNGFMYSVVLKACGLVGEIELGRLIHKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKV 162

Query: 178 FEEMS-EPNEVTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSV--------SLSSV 227
           F+ +    N  ++  M+SG  K   V EA+ +F  M  R  VS +++        S  ++
Sbjct: 163 FDRIFLRANSTSWNTMISGYFKEGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENGSSRAL 222

Query: 228 LGVCA--REGCGVESDVFAQSDNKFSRN---VHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
             VC   REG  ++   F  +    S     V G+Q+HC  +K G E+     ++L+DMY
Sbjct: 223 QFVCKMHREGIKLDKFTFPCALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMY 282

Query: 283 AKNGDMDSAEVIFSNLPE------RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +    +D A  +F            S+V WN M++GY    ++  A+ ++ ++   G   
Sbjct: 283 SNCNGLDDAIRLFDQYSGGTGSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASV 342

Query: 337 DEVTSINMLVACV-----------------------------------RSGDIKTGREMF 361
           D  T  + L  C+                                   + G++K   ++F
Sbjct: 343 DSYTLSSALKVCINLLNVRLGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLF 402

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
             +P   + +W+ +L   ++ E +  A+ LFR+M   GV+ D+  ++ +L  C+++  + 
Sbjct: 403 HRLPKKDIVAWSGLLMGCAKMELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIG 462

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           +GKQVHA  +K     +    + LI +YSKC   E    +F  + + D+VCW  +I G +
Sbjct: 463 TGKQVHAFCIKRGYETEQVTITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCA 522

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N    EA   F+QM Q+ + P + ++  VL++C       + + +   ++ D  +    
Sbjct: 523 QNGRANEALEIFRQMVQSGLKPNEVTYLGVLTACRHAGLVVEAQTIFGTMKCDHRLE--- 579

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
               L   YC                         M+    Q GY  E  +L  +M    
Sbjct: 580 --PQLEHYYC-------------------------MVDLLCQAGYFKEVEKLIAEM---P 609

Query: 602 VKPDDITFVAILTACS---HSGLVDVGVE 627
            KPD   + ++L AC    ++GLV    E
Sbjct: 610 FKPDKTIWSSMLGACGTHRNTGLVSTIAE 638



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 141/317 (44%), Gaps = 38/317 (11%)

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           C  +  L+ GK  H+  +KT    + Y+A  L+ +Y+       A ++F  +P  +IV W
Sbjct: 13  CGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVKNIVTW 72

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEM-YPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
            +M++  + N    EA   + +M  ++   P  F ++ VL +C  +     GR +H +  
Sbjct: 73  TTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIHKRFS 132

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAV 591
           ++    DI + +AL++MY KCG +  AR+ FD +  + N+ +WN MI GY + G  +EAV
Sbjct: 133 RENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVEEAV 192

Query: 592 RLYKDM-----------IAS-------------------GVKPDDITFVAILTACSHSGL 621
            L+  M           IA                    G+K D  TF   L  CS++G 
Sbjct: 193 NLFNQMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREGIKLDKFTFPCALKTCSYAGF 252

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK-----DDPVI 676
           +  G +I +   L  G+E      + ++D         +A  L D+         D  V+
Sbjct: 253 LVAGKQI-HCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSICDSLVL 311

Query: 677 WEVLLSSCRLHANVRLA 693
           W  +LS   +H   R A
Sbjct: 312 WNSMLSGYVVHEKNRAA 328


>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
 gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
          Length = 734

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 215/751 (28%), Positives = 357/751 (47%), Gaps = 97/751 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  + R+G  D ++L   ++++Y+KC                            C 
Sbjct: 33  GRRLHDDLRRSGYGDSSYLRRCVVQMYAKCG---------------------------CL 65

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +D    A   FDE+ ++N   WN +IS   R+G   +AL +++KM      P     AS 
Sbjct: 66  AD----AKAAFDEIADKNDFVWNLMISGYARSGKNREALELFHKMD---IPPNGFIFASA 118

Query: 127 FKASTALLDVEHGRRCHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A   L D+E GR  H  V++   +  ++ V N+L+++YA+CG     + +F+ M   N
Sbjct: 119 LAACAGLGDLEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKN 178

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM+S   + D   +ALE++  M R+ +  +    +S+L  CA  G          
Sbjct: 179 LVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLG---------- 228

Query: 246 SDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                  N+  G  +H     LG + D+ + N+L++MY+K G MD A  +FS L  R V 
Sbjct: 229 -------NLQLGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVF 281

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------- 349
           +W  MIAGY Q    ++A     RM+     P   T + +L AC                
Sbjct: 282 TWTSMIAGYAQLGFGSEAFAFYDRMRRDCVSPTSATFVALLSACSTLEQGKHLHEEVKAF 341

Query: 350 -----------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                            R G ++    +F  M      SW+AM++S++Q  +  +A+ LF
Sbjct: 342 GFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLF 401

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID--NYVASGLIGIYS 450
           R+M   G++    T    L +C+        K +    L   S ID  + + + L+  YS
Sbjct: 402 RQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIR--ELIDWSGIDKMDSIRADLVSAYS 459

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   E A ++F R+   D++ W  MI G +       A   F +M+   + P   +F++
Sbjct: 460 KCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSS 519

Query: 511 VLSSCAKLSSSFQGRQVHAQI--EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           VL +C+ L     GR+VHA+I   + G ++D F+G+ LI MY +CG +  ARQ F+ M  
Sbjct: 520 VLQACSNLE---DGREVHARILAAQGGKMSD-FLGNGLINMYARCGSMRDARQIFESMDR 575

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            + ++W+ ++   A++G  D+ +  Y+ M+  GV PD +T +AIL +CSH+GL D     
Sbjct: 576 SSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHY 635

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F  +  D  +  + +HY CM+D L RAG   EAE LI  M  + D V    +L++C+   
Sbjct: 636 FTWIISDFELPHLDEHYQCMVDLLCRAGRLDEAEELI-SMIDRPDVVTLNTMLAACKNQQ 694

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           ++    R A ++ +     +AP+ LL+ IY+
Sbjct: 695 DLHRGARTAAQM-QSTESCAAPFVLLSQIYA 724



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/528 (26%), Positives = 255/528 (48%), Gaps = 71/528 (13%)

Query: 252 RNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
           RNV  G+++H    + G+    +L   ++ MYAK G +  A+  F  + +++   WN+MI
Sbjct: 28  RNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIADKNDFVWNLMI 87

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------- 360
           +GY +  ++ +A+EL  +M      P+     + L AC   GD++ GRE+          
Sbjct: 88  SGYARSGKNREALELFHKMD---IPPNGFIFASALAACAGLGDLEQGREIHKRVLESRSI 144

Query: 361 --------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                     FD+MP  ++ SWNAM+S++ Q +  ++A++L+  
Sbjct: 145 ASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALELYHR 204

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+   ++P+    A +L++CA++G L+ G  +H          D  + + LI +YSKC  
Sbjct: 205 MKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVMENALINMYSKCGC 264

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A  VF  +   D+  W SMIAG +      EAF F+ +MR++ + PT  +F  +LS+
Sbjct: 265 MDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRMRRDCVSPTSATFVALLSA 324

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C+ L    QG+ +H +++  G+ +   V +AL+ MY +CG +  A   F  M  K+ V+W
Sbjct: 325 CSTLE---QGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSW 381

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG----------LVD- 623
           + M+  +AQ G   +A+ L++ MI  G++    TF + L ACS             L+D 
Sbjct: 382 SAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDW 441

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G++  +S++ D            ++    + G   EA  + D M  + D + W V++  
Sbjct: 442 SGIDKMDSIRAD------------LVSAYSKCGDMEEARKIFDRMESR-DVLTWTVMIKG 488

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSL-LANIYSSLGRWDDLRAV 730
              +A    +K A E   R+ P+   P S+  +++  +    +D R V
Sbjct: 489 ---YAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSNLEDGREV 533



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 4/222 (1%)

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           A +L  C +   +  G+++H    ++     +Y+   ++ +Y+KC     A+  F  I +
Sbjct: 18  ARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIAD 77

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            +   WN MI+G + +  + EA   F +M   ++ P  F FA+ L++CA L    QGR++
Sbjct: 78  KNDFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQGREI 134

Query: 528 HAQI-EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           H ++ E     +D+ V ++L+ MY +CG +    + FD M  KN V+WN MI  + Q  Y
Sbjct: 135 HKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDY 194

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            ++A+ LY  M    ++P+   F ++LTAC+  G + +G  I
Sbjct: 195 PEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSI 236



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 21/247 (8%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +A +L  C    +  +GR++H  + + GY +  ++   +++MY KCG +  A+  FD + 
Sbjct: 17  YARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIA 76

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            KN   WN MI GYA++G   EA+ L+  M    + P+   F + L AC+  G ++ G E
Sbjct: 77  DKNDFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQGRE 133

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS---C 684
           I   +     +   +     ++    R G   E   + D MP + + V W  ++S+   C
Sbjct: 134 IHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMP-RKNLVSWNAMISAFVQC 192

Query: 685 RL-HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG----------RWDDLRAVREL 733
                 + L  R   E  RL+P N   ++ L    +SLG          R   L   R++
Sbjct: 193 DYPEQALELYHRMKRE--RLEP-NGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDI 249

Query: 734 MSENCIV 740
           + EN ++
Sbjct: 250 VMENALI 256


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 176/472 (37%), Positives = 268/472 (56%), Gaps = 13/472 (2%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK-AIELLQRMKSCGF 334
           N  +  + +  D++SA  +F  +  R+ V+WN M++GY +     K A EL  ++     
Sbjct: 77  NKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP---- 132

Query: 335 EPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           EPD V+   MLV  +RS  +K     F+ MP   ++SWN ++S ++Q+   ++A  LF  
Sbjct: 133 EPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSV 192

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M     + +  + + ++S     G LE+ ++++    K        V + ++  Y K  +
Sbjct: 193 MP----EKNGVSWSAMISGYVEHGDLEAAEELY----KNVGMKSVVVETAMLTGYMKFGK 244

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            ELAER+F R+   ++V WNSMIAG   N    +    FK M ++ + P   S ++VL  
Sbjct: 245 VELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLG 304

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C+ LS+   GRQ+H  + K     D    ++LI MYCKCGD+  A + F  M  K+ +TW
Sbjct: 305 CSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITW 364

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI GYAQ+G G +A+ L+  M    +KPD ITFVA++ AC+H+G VD+GV+ F SM+ 
Sbjct: 365 NAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKK 424

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           + G+E    HYTC+ID LGRAG   EA  LI EMP      I+  LL +CR+H N+ LA+
Sbjct: 425 EFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAE 484

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA  L  LDP ++  Y  LANIY++  +WD +  VR++M E+ +VK P YS
Sbjct: 485 FAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYS 536



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 194/416 (46%), Gaps = 64/416 (15%)

Query: 5   VAGKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           VAGK+  AH L + + + D+   N ++  Y +     +A   F+KMP KDI SWN ++S 
Sbjct: 117 VAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISG 176

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             ++  ++ A+ LF  MPE+N VSW+ +IS  V +G  E A  +Y               
Sbjct: 177 FAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYK-------------- 222

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
                                    +G+ K++ V  A+L+ Y K G  + A  +F+ M+ 
Sbjct: 223 ------------------------NVGM-KSVVVETAMLTGYMKFGKVELAERIFQRMAV 257

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N VT+ +M++G  +  R  + L++F+ MI   V  + +SLSSVL  C+           
Sbjct: 258 KNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCS----------- 306

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                  S    G+Q+H L  K     D     SL+ MY K GD+DSA  +F  +P + V
Sbjct: 307 -----NLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDV 361

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           ++WN MI+GY Q     KA+ L  +M++   +PD +T + +++AC  +G +  G + F S
Sbjct: 362 ITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKS 421

Query: 364 MPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           M            +  ++    ++    EA+ L +EM F    P       +L +C
Sbjct: 422 MKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPF---TPHAAIYGTLLGAC 474


>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
          Length = 671

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 193/652 (29%), Positives = 340/652 (52%), Gaps = 63/652 (9%)

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
           H R  HG  +K+G   + Y+ N LL  Y   G    A  VF+EM   N V+++ +++  +
Sbjct: 20  HPRAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASS 79

Query: 198 KTDRVVEALEMFRLMIRKAVS--IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
           +   + +AL +F  M+R       +S ++++++  CAR                    V 
Sbjct: 80  RLGVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARA----------------KDAVA 123

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA---G 312
           G+QVH   +KLG + D  ++ +L+DMYAK G + S+   F   P+RSV+SW  MIA    
Sbjct: 124 GEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVN 183

Query: 313 YGQKYQSTKAIELLQRMK-----------SCGFE----PDEVTSINMLVACVRSGDIKTG 357
           +G       AI L ++M            SC  +    P+ + S   +  C+    +K G
Sbjct: 184 HGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCL----VKMG 239

Query: 358 REMFDSMPSPSVS-----------------------SWNAMLSSYSQSENHKEAIKLFRE 394
            E+  ++ +  ++                       S  ++L++Y+++  + EA+++FR+
Sbjct: 240 TEVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRD 299

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M    +  D++ +  +L  C+++G L   K++H  +LK    +D  + + ++ +Y KC  
Sbjct: 300 MLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGD 359

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              +E VF+ +   D + W +++     N L  EA  FF++M +  +  + F   +VL +
Sbjct: 360 IASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRA 419

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C+  SS   G Q+H+++ K G  +D  V +AL+ MY KCG +  A + F+ M  +  ++W
Sbjct: 420 CSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISW 479

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I  ++Q+G    A++L+  M    V PDD TFV +L++CS  GLV  G E F  M+ 
Sbjct: 480 NALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKT 539

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
            + +EP ++HYTCM+D   RAG F +A   ID MPC+ D ++WE LL+SCR+H N+ L +
Sbjct: 540 KYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGR 599

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA+++  + P++ +PY +L++I++S+  WD+    R L+    + KD   S
Sbjct: 600 MAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLLDFQQLRKDVGSS 651



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/652 (21%), Positives = 284/652 (43%), Gaps = 88/652 (13%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H   + +H   ++ G    T+LCN L+  Y    +   A+ +FD+MP +++ SW+ +++A
Sbjct: 18  HSHPRAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAA 77

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             +   L  A  LF               + ++R G  ++              P   T+
Sbjct: 78  SSRLGVLGDALSLF---------------AGMLRGGERDR--------------PNSFTV 108

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A++        D   G + H   +K+G+D++  VA  L+ +YAKCG    +   F    +
Sbjct: 109 AALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQ 168

Query: 184 PNEVTFTAMMSGL---AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            + +++T+M++ L     +     A+ +F+ M+   V   + + S +L            
Sbjct: 169 RSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCIL------------ 216

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
            VF   +   S    G+QVH   +K+G E D  L  +LL MY + G MD    +   +  
Sbjct: 217 KVFDVPELLPS----GKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-R 271

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------- 349
               S   ++  Y +   + +A+ + + M       D+    ++L  C            
Sbjct: 272 HDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEI 331

Query: 350 ------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + GDI +   +F+++ +    SW A+L+ Y Q++  
Sbjct: 332 HCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLS 391

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +EA+  FREM  +G++     +  +L +C+A   L  G Q+H+  +K     D  V + L
Sbjct: 392 QEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENAL 451

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC   ++A ++F+ +    I+ WN++I   S +  ++ A   F  M++  + P  
Sbjct: 452 VTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDD 511

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIE-KDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           ++F  +LSSC+++    +G +   Q++ K      +   + +++++ + G    A +F D
Sbjct: 512 YTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFID 571

Query: 565 MMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
            M  + + + W  ++     +G  D      K ++   +KP+D +   IL++
Sbjct: 572 AMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILE--IKPEDPSPYIILSS 621



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 132/594 (22%), Positives = 266/594 (44%), Gaps = 103/594 (17%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K  VAG+ +HA  ++ G+ +D  +   L+++Y+KC    S+   F   P + + SW +++
Sbjct: 119 KDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMI 178

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +      D                            +G  + A+ ++ KM      PT+ 
Sbjct: 179 ACLVNHGD----------------------------SGYRDTAIVLFKKMLVLKVWPTNA 210

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T + + K       +  G++ HG ++K+G + +  +  ALL++Y +CG       +   +
Sbjct: 211 TFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI 270

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              +  + T++++  A+    +EA+ +FR M+   + ID  +++S+L VC+  G   +  
Sbjct: 271 RH-DAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLG---QLR 326

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           V              +++HC  +K  F  D  L N+++ +Y K GD+ S+E++F+ L  +
Sbjct: 327 VV-------------KEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENK 373

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
             +SW  ++  Y Q   S +A+   + M   G E       ++L AC             
Sbjct: 374 DTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIH 433

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G ++   ++F+SM +  + SWNA+++S+SQ  N  
Sbjct: 434 SRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEV 493

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SG 444
            AI+LF  MQ   V PD  T   +LSSC+ MG++  G + +   +KT  +++  +   + 
Sbjct: 494 AAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCE-YFKQMKTKYNLEPKMEHYTC 552

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-SLDIEAFMFFKQMRQNEMY 502
           ++ ++++  R   A +    +P + D + W +++A   ++ +LD+      K +   E+ 
Sbjct: 553 MVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKIL---EIK 609

Query: 503 PTQFSFATVLSSC----------AKLSSSFQGRQVH-----AQIEKDGYVNDIF 541
           P   S   +LSS           A+  +    +Q+      +Q++  G+ +DIF
Sbjct: 610 PEDPSPYIILSSIHASIDMWDEKARNRTLLDFQQLRKDVGSSQLDSQGFSDDIF 663


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 216/742 (29%), Positives = 365/742 (49%), Gaps = 72/742 (9%)

Query: 58  NAILS--AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM---- 111
           NA++S    C       A ++FD  P R++++WN L+S   + G      +++  M    
Sbjct: 209 NALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDD 268

Query: 112 SNEGFVPTHITLASVFKA------STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
           S     PT  T  S+  A      S  LLD    R     V+K G   ++YV +AL+S +
Sbjct: 269 SGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVR-----VLKSGCSSDLYVGSALVSAF 323

Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
           A+ G    A  ++  + E N VT   +++GL K      A E+F +  R + +++  +  
Sbjct: 324 ARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF-MGARDSAAVNVDTYV 382

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAK 284
            +L   A          F+ ++    +   G++VH   ++ G     + +SN L++MYAK
Sbjct: 383 VLLSAIAE---------FSTAEQGLRK---GREVHAHVLRAGHIYRKIAVSNGLVNMYAK 430

Query: 285 NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
            G +D A  +F  +  R  +SWN +I    Q      A+     M+     P    +I+ 
Sbjct: 431 CGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISG 490

Query: 345 LVACVRSGDIKTGR-----------------------------------EMFDSMPSPSV 369
           L +C   G +  G+                                   E+F+SM +  V
Sbjct: 491 LSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDV 550

Query: 370 SSWNAMLSSYSQSENH-KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
            SWN+++   + S+    E++++F  M   G+ P++ T    L++   + +LE GKQ+H+
Sbjct: 551 VSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHS 610

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDI 487
             LK     DN V + L+  Y+K    +  ER+F R+    D + WNSMI+G   N    
Sbjct: 611 VMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQ 670

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           EA      M  +E      +F+ VL++CA +++  +G ++HA   +    +D+ V SAL+
Sbjct: 671 EAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALV 730

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
           +MY KCG I  A + F  M  KN  +WN MI GYA++G G +A+ ++++M  SG  PD +
Sbjct: 731 DMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHV 790

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           TFV++L+ACSH+GLV+ G++ F  M+ D+G+ P ++HY+C+ID LGRAG   + +  +  
Sbjct: 791 TFVSVLSACSHAGLVERGLDYFELME-DYGILPRIEHYSCVIDLLGRAGELDKIQEYMKR 849

Query: 668 MPCKDDPVIWEVLLSSC---RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRW 724
           MP K + +IW  +L +C   +  A + L   A+  L  L+P+N   Y L +  ++++GRW
Sbjct: 850 MPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRW 909

Query: 725 DDLRAVRELMSENCIVKDPAYS 746
           +D    R  M    + K+   S
Sbjct: 910 EDTAKARAAMKGAAVKKEAGRS 931



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 186/739 (25%), Positives = 316/739 (42%), Gaps = 93/739 (12%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH  +++ GL  D FL N L+  Y+K     +A+ +FD MP ++  SW  ++S    S  
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
            E A+ LF                A++R G               G  PT  T  SV +A
Sbjct: 147 PEDAFPLF---------------RAMLREG--------------PGCRPTSFTFGSVLRA 177

Query: 130 --STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC--GWTKHAVPVFEEMSEPN 185
              +    +    + HGLV K     N  V NAL+S+Y  C  G    A  VF+     +
Sbjct: 178 CQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRD 237

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +T+ A+MS  AK    +    +FR M      I+        G        + S     
Sbjct: 238 LITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLI-TATYLSSCSLGL 296

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D  F R           +K G  +DL++ ++L+  +A++G +D A+ I+  L ER+ V+
Sbjct: 297 LDQLFVR----------VLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVT 346

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMK-SCGFEPD-----------------------EVTS 341
            N +IAG  ++     A E+    + S     D                       EV +
Sbjct: 347 LNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHA 406

Query: 342 ------------------INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                             +NM   C   G I     +F  M +    SWN ++++  Q+ 
Sbjct: 407 HVLRAGHIYRKIAVSNGLVNMYAKC---GAIDKACRVFQLMEARDRISWNTIITALDQNG 463

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
             + A+  +  M+   + P        LSSCA +G+L +G+Q+H  ++K   ++D  V++
Sbjct: 464 YCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSN 523

Query: 444 GLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI-EAFMFFKQMRQNEMY 502
            L+ +Y +C R      +F+ +   D+V WNS++  ++ +   I E+   F  M ++ + 
Sbjct: 524 ALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLV 583

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P + +F   L++   LS    G+Q+H+ + K G   D  V +AL+  Y K GD+    + 
Sbjct: 584 PNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERL 643

Query: 563 FDMMHG-KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
           F  M G ++ ++WN MI GY  NG+  EA+     M+ S    D  TF  +L AC+    
Sbjct: 644 FSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAA 703

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           ++ G+E+ ++  L   +E  +   + ++D   + G    A  +   M  K++   W  ++
Sbjct: 704 LERGMEM-HAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNE-FSWNSMI 761

Query: 682 SSCRLHANVRLAKRAAEEL 700
           S    H   R A    EE+
Sbjct: 762 SGYARHGLGRKALEIFEEM 780



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 204/455 (44%), Gaps = 85/455 (18%)

Query: 7   GKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ +HAH+LR G ++    + N L+ +Y+KC          DK                 
Sbjct: 401 GREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGA-------IDK----------------- 436

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                  A ++F  M  R+ +SWN +I+AL +NG  E A+  Y  M      P++    S
Sbjct: 437 -------ACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAIS 489

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              +   L  +  G++ H   +K GL  +  V+NAL+ +Y +CG       +F  MS  +
Sbjct: 490 GLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHD 549

Query: 186 EVTFTAMMSGLAKTDR-VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
            V++ ++M  +A +   + E++++F  M++  +  + V+  +                F 
Sbjct: 550 VVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVN----------------FL 593

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSV 303
            +    S    G+Q+H + +K G   D  + N+L+  YAK+GD+DS E +FS +   R  
Sbjct: 594 AALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDA 653

Query: 304 VSWNVMIAGY---GQKYQSTKAIELL----QRMKSCGF---------------------- 334
           +SWN MI+GY   G   ++   + L+    Q M  C F                      
Sbjct: 654 ISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAF 713

Query: 335 ------EPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                 E D V    ++    + G I    ++F SM   +  SWN+M+S Y++    ++A
Sbjct: 714 GLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKA 773

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +++F EMQ  G  PD  T   +LS+C+  G++E G
Sbjct: 774 LEIFEEMQESGESPDHVTFVSVLSACSHAGLVERG 808



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 196/414 (47%), Gaps = 54/414 (13%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ LH   ++ GL+ DT + N L+++Y +C        +F+ M   D+ SWN+I+    
Sbjct: 502 AGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMA 561

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            S           + P                     +++ V++ M   G VP  +T  +
Sbjct: 562 SS-----------QAP-------------------ITESVQVFSNMMKSGLVPNKVTFVN 591

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EP 184
              A T L  +E G++ H +++K G+ ++  V NAL+S YAK G       +F  MS   
Sbjct: 592 FLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRR 651

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + +++ +M+SG      + EA++   LM+     +D  + S VL  CA            
Sbjct: 652 DAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACA------------ 699

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
            S     R   G ++H   ++   E+D+ + ++L+DMY+K G +D A  +F ++ +++  
Sbjct: 700 -SVAALER---GMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEF 755

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SWN MI+GY +     KA+E+ + M+  G  PD VT +++L AC  +G ++ G + F+ M
Sbjct: 756 SWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELM 815

Query: 365 PS----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                 P +  ++ ++    ++    E  K+   M+   +KP+      +L +C
Sbjct: 816 EDYGILPRIEHYSCVIDLLGRA---GELDKIQEYMKRMPMKPNTLIWRTVLVAC 866



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 197/427 (46%), Gaps = 60/427 (14%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           + +H   +K G   DL L+N L++ YAK   +D+A  +F  +P R+ VSW  +I+G+   
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 317 YQSTKAIELLQRM--KSCGFEPDEVTSINMLVACVRSGDIKTG----------------- 357
                A  L + M  +  G  P   T  ++L AC  SG  + G                 
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204

Query: 358 ----------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                                 + +FD+ P   + +WNA++S Y++  +      LFR M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264

Query: 396 QFRG----VKPDRTTL-----AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           Q+      ++P   T      A  LSSC ++G+L+   Q+    LK+    D YV S L+
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSC-SLGLLD---QLFVRVLKSGCSSDLYVGSALV 320

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
             +++    + A+ ++  + E + V  N +IAGL        A   F   R +       
Sbjct: 321 SAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD- 379

Query: 507 SFATVLSSCAKLSSSFQ----GRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGDIYGARQ 561
           ++  +LS+ A+ S++ Q    GR+VHA + + G++   I V + L+ MY KCG I  A +
Sbjct: 380 TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACR 439

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F +M  ++ ++WN +I    QNGY + A+  Y  M  + + P +   ++ L++C+  GL
Sbjct: 440 VFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGL 499

Query: 622 VDVGVEI 628
           +  G ++
Sbjct: 500 LAAGQQL 506



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 124/259 (47%), Gaps = 18/259 (6%)

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
           G   S + +H   +K     D ++A+ L+  Y+K  R + A RVF  +P  + V W  +I
Sbjct: 79  GCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLI 138

Query: 478 AGLSLNSLDIEAFMFFKQMRQN--EMYPTQFSFATVLSSCAKLSSSFQG--RQVHAQIEK 533
           +G  L+ L  +AF  F+ M +      PT F+F +VL +C        G   QVH  + K
Sbjct: 139 SGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSK 198

Query: 534 DGYVNDIFVGSALIEMY--CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
             + ++  V +ALI MY  C  G    A++ FD    ++ +TWN ++  YA+ G      
Sbjct: 199 TEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTF 258

Query: 592 RLYKDMIA--SGV--KPDDITFVAILTACSHS----GLVDVGVEIFNSMQLDHGVEPILD 643
            L++ M    SG+  +P + TF +++TA   S    GL+D   ++F  + L  G    L 
Sbjct: 259 TLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLD---QLFVRV-LKSGCSSDLY 314

Query: 644 HYTCMIDCLGRAGHFHEAE 662
             + ++    R G   EA+
Sbjct: 315 VGSALVSAFARHGMLDEAK 333


>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
          Length = 799

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 199/660 (30%), Positives = 324/660 (49%), Gaps = 88/660 (13%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           N +L+ Y+  G    AV +F+ M +P+ V++ A++SG  +     E++++F  M R+ VS
Sbjct: 87  NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            D  + + +L  C+                       G QVH L +K G E D+   ++L
Sbjct: 147 PDRTTFAVLLKSCS----------------ALEELSLGVQVHALAVKTGLEIDVRTGSAL 190

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +DMY K   +D A   F  +PER+ VSW   IAG  Q  Q  + +EL   M+  G    +
Sbjct: 191 VDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQ 250

Query: 339 VTSINMLVACVRSGDIKTGREMFDSMPSPSVSS----WNAMLSSYSQSENHKEAIKLFRE 394
            +  +   +C     + TGR++         SS      A++  Y+++ +  +A + F  
Sbjct: 251 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG 310

Query: 395 -----------------MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA--------- 428
                            M    ++ D  +L+ + S+CA       G+QVH          
Sbjct: 311 LPNHTVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDL 370

Query: 429 -----------------------------ASLKTASHIDN-------------YVASGLI 446
                                        A+L+   H D+             +VAS ++
Sbjct: 371 YGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVV 430

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +Y KC   + A+++  RI    +V WN++++G SLN     A  FF +M    + P  F
Sbjct: 431 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHF 490

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           +FATVL +CA L++   G+Q+H QI K   ++D ++ S L++MY KCGD+  +   F+ +
Sbjct: 491 TFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKV 550

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             ++ V+WN MI GYA +G G EA+R+++ M    V P+  TFVA+L ACSH GL D G 
Sbjct: 551 EKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGC 610

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
             F+ M   + +EP L+H+ CM+D LGR+    EA   I+ MP + D VIW+ LLS C++
Sbjct: 611 RYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKI 670

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             +V +A+ AA  +  LDP +S+ Y LL+N+Y+  G+W D+   R L+ +  + K+P  S
Sbjct: 671 RQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCS 730


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 181/599 (30%), Positives = 302/599 (50%), Gaps = 53/599 (8%)

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N    + +++   K +   +A +++  M      +D+  + SVL  C    C + S +  
Sbjct: 88  NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKAC----CLIPSFLL- 142

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      GQ+VH   +K GF  D+ + N+L+ MY++ G +  A ++F  +  + VV
Sbjct: 143 -----------GQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVV 191

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           SW+ MI  Y +     +A++LL+ M     +P E+  I++        D+K G+ M    
Sbjct: 192 SWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYV 251

Query: 361 ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                            FD +   S+ SW AM+++Y    N  E
Sbjct: 252 MRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNE 311

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
            ++LF +M   G+ P+  T+  ++  C   G LE GK +HA +L+    +   +A+  I 
Sbjct: 312 GVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFID 371

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y KC     A  VF      D++ W++MI+  + N+   EAF  F  M    + P + +
Sbjct: 372 MYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERT 431

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
             ++L  CAK  S   G+ +H+ I+K G   D+ + ++ ++MY  CGDI  A + F    
Sbjct: 432 MVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEAT 491

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++   WN MI G+A +G+G+ A+ L+++M A GV P+DITF+  L ACSHSGL+  G  
Sbjct: 492 DRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKR 551

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           +F+ M  + G  P ++HY CM+D LGRAG   EA  LI  MP + +  ++   L++C+LH
Sbjct: 552 LFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLH 611

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            N++L + AA++   L+P  S    L++NIY+S  RW D+  +R  M +  IVK+P  S
Sbjct: 612 KNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVS 670



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 210/457 (45%), Gaps = 84/457 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +++NG   D F+CN LI +YS+  +   A+ LFDK+ +KD+ SW         
Sbjct: 143 GQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSW--------- 193

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                 + +I +  R+GL ++AL +   M      P+ I + S+
Sbjct: 194 ----------------------STMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISI 231

Query: 127 FKASTALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
                 L D++ G+  H  V++ G      + +  AL+ +Y KC    +A  VF+ +S+ 
Sbjct: 232 THVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKA 291

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + +++TAM++     + + E + +F  M+ + +  + +++ S++  C   G  +E     
Sbjct: 292 SIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAG-ALEL---- 346

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+ +H  T++ GF   L L+ + +DMY K GD+ SA  +F +   + ++
Sbjct: 347 -----------GKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLM 395

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------------- 351
            W+ MI+ Y Q     +A ++   M  CG  P+E T +++L+ C ++             
Sbjct: 396 MWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYI 455

Query: 352 ----------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                 GDI T   +F       +S WNAM+S ++   + + A+
Sbjct: 456 DKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAAL 515

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           +LF EM+  GV P+  T    L +C+  G+L+ GK++
Sbjct: 516 ELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRL 552



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 228/515 (44%), Gaps = 56/515 (10%)

Query: 91  LISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG 150
           LI++ ++N     A  +Y  M        +  + SV KA   +     G+  HG V+K G
Sbjct: 95  LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
              +++V NAL+ +Y++ G    A  +F+++   + V+++ M+    ++  + EAL++ R
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214

Query: 211 ---LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
              +M  K   I  +S++ VL   A    G     +   + K  +               
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGK--------------- 259

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
             + + L  +L+DMY K  ++  A  +F  L + S++SW  MIA Y       + + L  
Sbjct: 260 --SGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFV 317

Query: 328 RMKSCGFEPDEVTSINMLVAC-----------------------------------VRSG 352
           +M   G  P+E+T ++++  C                                    + G
Sbjct: 318 KMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCG 377

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           D+++ R +FDS  S  +  W+AM+SSY+Q+    EA  +F  M   G++P+  T+  +L 
Sbjct: 378 DVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLM 437

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
            CA  G LE GK +H+   K     D  + +  + +Y+ C   + A R+F    + DI  
Sbjct: 438 ICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISM 497

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV-HAQI 531
           WN+MI+G +++     A   F++M    + P   +F   L +C+      +G+++ H  +
Sbjct: 498 WNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMV 557

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
            + G+   +     ++++  + G +  A +    M
Sbjct: 558 HEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSM 592



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 202/441 (45%), Gaps = 57/441 (12%)

Query: 7   GKLLHAHILRNGLFDDTF--LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           GK +HA+++RNG    +   LC  LI++Y KC N                          
Sbjct: 244 GKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCEN-------------------------- 277

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                L +A ++FD + + +++SW  +I+A +      + + ++ KM  EG  P  IT+ 
Sbjct: 278 -----LAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITML 332

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+ K       +E G+  H   ++ G   ++ +A A + +Y KCG  + A  VF+     
Sbjct: 333 SLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSK 392

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + + ++AM+S  A+ + + EA ++F  M    +  +  ++ S+L +CA+ G  +E     
Sbjct: 393 DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAG-SLEM---- 447

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+ +H    K G + D+ L  S +DMYA  GD+D+A  +F+   +R + 
Sbjct: 448 -----------GKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDIS 496

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
            WN MI+G+        A+EL + M++ G  P+++T I  L AC  SG ++ G+ +F  M
Sbjct: 497 MWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKM 556

Query: 365 P-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                 +P V  +  M+    ++    EA +L + M  R   P+       L++C     
Sbjct: 557 VHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMR---PNIAVFGSFLAACKLHKN 613

Query: 420 LESGKQVHAASLKTASHIDNY 440
           ++ G+      L    H   Y
Sbjct: 614 IKLGEWAAKQFLSLEPHKSGY 634


>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
 gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
          Length = 721

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 193/652 (29%), Positives = 340/652 (52%), Gaps = 63/652 (9%)

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
           H R  HG  +K+G   + Y+ N LL  Y   G    A  VF+EM   N V+++ +++  +
Sbjct: 20  HPRAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASS 79

Query: 198 KTDRVVEALEMFRLMIRKAVS--IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
           +   + +AL +F  M+R       +S ++++++  CAR                    V 
Sbjct: 80  RLGVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARA----------------KDAVA 123

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA---G 312
           G+QVH   +KLG + D  ++ +L+DMYAK G + S+   F   P+RSV+SW  MIA    
Sbjct: 124 GEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVN 183

Query: 313 YGQKYQSTKAIELLQRMK-----------SCGFE----PDEVTSINMLVACVRSGDIKTG 357
           +G       AI L ++M            SC  +    P+ + S   +  C+    +K G
Sbjct: 184 HGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCL----VKMG 239

Query: 358 REMFDSMPSPSVS-----------------------SWNAMLSSYSQSENHKEAIKLFRE 394
            E+  ++ +  ++                       S  ++L++Y+++  + EA+++FR+
Sbjct: 240 TEVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRD 299

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M    +  D++ +  +L  C+++G L   K++H  +LK    +D  + + ++ +Y KC  
Sbjct: 300 MLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGD 359

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              +E VF+ +   D + W +++     N L  EA  FF++M +  +  + F   +VL +
Sbjct: 360 IASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRA 419

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C+  SS   G Q+H+++ K G  +D  V +AL+ MY KCG +  A + F+ M  +  ++W
Sbjct: 420 CSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISW 479

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I  ++Q+G    A++L+  M    V PDD TFV +L++CS  GLV  G E F  M+ 
Sbjct: 480 NALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKT 539

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
            + +EP ++HYTCM+D   RAG F +A   ID MPC+ D ++WE LL+SCR+H N+ L +
Sbjct: 540 KYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGR 599

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA+++  + P++ +PY +L++I++S+  WD+    R L+    + KD   S
Sbjct: 600 MAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLLDFQQLRKDVGSS 651



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/652 (21%), Positives = 284/652 (43%), Gaps = 88/652 (13%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H   + +H   ++ G    T+LCN L+  Y    +   A+ +FD+MP +++ SW+ +++A
Sbjct: 18  HSHPRAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAA 77

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             +   L  A  LF               + ++R G  ++              P   T+
Sbjct: 78  SSRLGVLGDALSLF---------------AGMLRGGERDR--------------PNSFTV 108

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A++        D   G + H   +K+G+D++  VA  L+ +YAKCG    +   F    +
Sbjct: 109 AALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQ 168

Query: 184 PNEVTFTAMMSGL---AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            + +++T+M++ L     +     A+ +F+ M+   V   + + S +L            
Sbjct: 169 RSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCIL------------ 216

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
            VF   +   S    G+QVH   +K+G E D  L  +LL MY + G MD    +   +  
Sbjct: 217 KVFDVPELLPS----GKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-R 271

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------- 349
               S   ++  Y +   + +A+ + + M       D+    ++L  C            
Sbjct: 272 HDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEI 331

Query: 350 ------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + GDI +   +F+++ +    SW A+L+ Y Q++  
Sbjct: 332 HCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLS 391

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +EA+  FREM  +G++     +  +L +C+A   L  G Q+H+  +K     D  V + L
Sbjct: 392 QEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENAL 451

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC   ++A ++F+ +    I+ WN++I   S +  ++ A   F  M++  + P  
Sbjct: 452 VTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDD 511

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIE-KDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           ++F  +LSSC+++    +G +   Q++ K      +   + +++++ + G    A +F D
Sbjct: 512 YTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFID 571

Query: 565 MMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
            M  + + + W  ++     +G  D      K ++   +KP+D +   IL++
Sbjct: 572 AMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILE--IKPEDPSPYIILSS 621



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 132/594 (22%), Positives = 266/594 (44%), Gaps = 103/594 (17%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K  VAG+ +HA  ++ G+ +D  +   L+++Y+KC    S+   F   P + + SW +++
Sbjct: 119 KDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMI 178

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +      D                            +G  + A+ ++ KM      PT+ 
Sbjct: 179 ACLVNHGD----------------------------SGYRDTAIVLFKKMLVLKVWPTNA 210

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T + + K       +  G++ HG ++K+G + +  +  ALL++Y +CG       +   +
Sbjct: 211 TFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI 270

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              +  + T++++  A+    +EA+ +FR M+   + ID  +++S+L VC+  G   +  
Sbjct: 271 RH-DAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLG---QLR 326

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           V              +++HC  +K  F  D  L N+++ +Y K GD+ S+E++F+ L  +
Sbjct: 327 VV-------------KEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENK 373

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
             +SW  ++  Y Q   S +A+   + M   G E       ++L AC             
Sbjct: 374 DTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIH 433

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G ++   ++F+SM +  + SWNA+++S+SQ  N  
Sbjct: 434 SRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEV 493

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SG 444
            AI+LF  MQ   V PD  T   +LSSC+ MG++  G + +   +KT  +++  +   + 
Sbjct: 494 AAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCE-YFKQMKTKYNLEPKMEHYTC 552

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-SLDIEAFMFFKQMRQNEMY 502
           ++ ++++  R   A +    +P + D + W +++A   ++ +LD+      K +   E+ 
Sbjct: 553 MVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKIL---EIK 609

Query: 503 PTQFSFATVLSSC----------AKLSSSFQGRQVH-----AQIEKDGYVNDIF 541
           P   S   +LSS           A+  +    +Q+      +Q++  G+ +DIF
Sbjct: 610 PEDPSPYIILSSIHASIDMWDEKARNRTLLDFQQLRKDVGSSQLDSQGFSDDIF 663


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 175/506 (34%), Positives = 267/506 (52%), Gaps = 70/506 (13%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N++L +YAK+G ++   VIF N+P R  VS+N +I+G+    +   A+ +  RM+  G +
Sbjct: 93  NAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLK 152

Query: 336 PDEVTSINMLVACV-----------------------------------RSGDIKTGREM 360
           P E T +++L AC                                    R G+I   R +
Sbjct: 153 PTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRL 212

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FD M   +V +WN M+S Y ++   ++ I LF EMQ   +KPD+ T + +L +       
Sbjct: 213 FDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA------- 265

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
                              Y+ +G I         + A +VF  I E D VCW  MI G 
Sbjct: 266 -------------------YIQAGYI---------DEARKVFGEIREKDEVCWTIMIVGC 297

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           + N  + +A + F +M      P  ++ ++V+SSCAKL+S + G+ VH +    G  +D+
Sbjct: 298 AQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDL 357

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            V SAL++MYCKCG    A   F  M  +N V+WN MI GYA NG   EA+ LY++M+  
Sbjct: 358 LVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEE 417

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
            +KPD +TFV +L+AC H+GLV+ G E F SM   HG+EP  DHY CM++  GR+GH  +
Sbjct: 418 NLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDK 477

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           A  LI  M  + + +IW  +LS C +  +++  + AA  L  L+P N+ PY +L+N+Y++
Sbjct: 478 AVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAA 537

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
            GRW D+ ++R LM    + K  AYS
Sbjct: 538 RGRWKDVASIRSLMKSKHVKKFSAYS 563



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 157/470 (33%), Positives = 229/470 (48%), Gaps = 61/470 (12%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H H+ +    +DTF+ NRL+ LY+K      A+ LFD+M  +D +SWNA+LS   KS  
Sbjct: 48  MHLHLFKP---NDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGL 104

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           +E    +FD MP R+ VS+N +IS    NG    AL V+ +M  EG  PT  T  SV  A
Sbjct: 105 VEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNA 164

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            T LLD+  G++ HG +I   L  N++V NAL  LYA+CG    A  +F+ M   N VT+
Sbjct: 165 CTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTW 224

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC--------ARE------- 234
             M+SG  K  +  + +++F  M    +  D V+ SSVLG          AR+       
Sbjct: 225 NLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIRE 284

Query: 235 -----------GC---GVESDVF----------AQSDN-----------KFSRNVHGQQV 259
                      GC   G E D            A+ D            K +   HGQ V
Sbjct: 285 KDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVV 344

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H     +G   DL +S++L+DMY K G    A  IFS +  R+VVSWN MI GY    Q 
Sbjct: 345 HGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQD 404

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNA 374
            +A+ L + M     +PD VT + +L ACV +G ++ G+E F SM       P+   +  
Sbjct: 405 LEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYAC 464

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           M++ + +S +  +A+ L   M     +P+      +LS C   G ++ G+
Sbjct: 465 MVNLFGRSGHMDKAVDLISSMS---QEPNSLIWTTVLSVCVMKGDIKHGE 511



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 252/519 (48%), Gaps = 61/519 (11%)

Query: 127 FKASTALLDVEHGRRCHG-LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           F+AS    DV+  +R    + + +    + ++ N LL+LYAK G   HA  +F+EM++ +
Sbjct: 33  FRAS----DVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRD 88

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFA 244
             ++ AM+S  AK+  V    E  R++     S DSVS ++V+   A  G G  +  VF 
Sbjct: 89  NFSWNAMLSLYAKSGLV----EDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFL 144

Query: 245 QSDN---KFSRNVH---------------GQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           +      K +   H               G+Q+H   I      ++ + N+L D+YA+ G
Sbjct: 145 RMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCG 204

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
           ++D A  +F  +  R+VV+WN+MI+GY +  Q  K I+L   M+    +PD+VT+ ++L 
Sbjct: 205 EIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLG 264

Query: 347 ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
           A +++G I   R++F  +       W  M+   +Q+   ++A+ LF EM     +PD  T
Sbjct: 265 AYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYT 324

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
           ++ ++SSCA +  L  G+ VH  +     + D  V+S L+ +Y KC     A  +F  + 
Sbjct: 325 ISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQ 384

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
             ++V WNSMI G +LN  D+EA   ++ M +  + P   +F  VLS+C           
Sbjct: 385 TRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSAC----------- 433

Query: 527 VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           VHA + ++G            E +C   D +G     D         +  M++ + ++G+
Sbjct: 434 VHAGLVEEGK-----------EYFCSMSDQHGLEPTPD--------HYACMVNLFGRSGH 474

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
            D+AV L   M     +P+ + +  +L+ C   G +  G
Sbjct: 475 MDKAVDLISSM---SQEPNSLIWTTVLSVCVMKGDIKHG 510



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 171/387 (44%), Gaps = 86/387 (22%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN-------- 58
           GK +H  I+   L  + F+CN L +LY++C     A+ LFD+M  +++ +WN        
Sbjct: 174 GKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLK 233

Query: 59  ---------------------------AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
                                      ++L A  ++  ++ A K+F E+ E++ V W  +
Sbjct: 234 NRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIM 293

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           I    +NG EE AL ++++M  E   P   T++SV  +   L  + HG+  HG    +G+
Sbjct: 294 IVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGV 353

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           + ++ V++AL+ +Y KCG T+ A  +F  M   N V++ +M+ G A   + +EAL ++  
Sbjct: 354 NDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYEN 413

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC-LTIKLGFEA 270
           M+ + +  DSV+   VL  C   G   E                G++  C ++ + G E 
Sbjct: 414 MLEENLKPDSVTFVGVLSACVHAGLVEE----------------GKEYFCSMSDQHGLEP 457

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK 330
                  +++++ ++G MD                               KA++L+  M 
Sbjct: 458 TPDHYACMVNLFGRSGHMD-------------------------------KAVDLISSMS 486

Query: 331 SCGFEPDEVTSINMLVACVRSGDIKTG 357
               EP+ +    +L  CV  GDIK G
Sbjct: 487 Q---EPNSLIWTTVLSVCVMKGDIKHG 510



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 155/302 (51%), Gaps = 13/302 (4%)

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL-KTASHIDNYVASGL 445
           +A +L   M     KP+ T +   L +  A    +SG+  HA  L    +  DN+  + +
Sbjct: 40  QAKRLKSHMHLHLFKPNDTFIHNRLLNLYA----KSGEISHARKLFDEMTQRDNFSWNAM 95

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+K    E    +F  +P  D V +N++I+G + N     A   F +M++  + PT+
Sbjct: 96  LSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTE 155

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           ++  +VL++C +L    +G+Q+H +I       ++FV +AL ++Y +CG+I  AR+ FD 
Sbjct: 156 YTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDR 215

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           M  +N VTWN MI GY +N   ++ + L+ +M  S +KPD +T  ++L A   +G +D  
Sbjct: 216 MVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEA 275

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM---PCKDDPVIWEVLLS 682
            ++F  ++    V      +T MI    + G   +A +L  EM     + D      ++S
Sbjct: 276 RKVFGEIREKDEV-----CWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVS 330

Query: 683 SC 684
           SC
Sbjct: 331 SC 332



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 19/223 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC- 65
           G+++H      G+ DD  + + L+++Y KC  T  A  +F  M  +++ SWN+++     
Sbjct: 341 GQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYAL 400

Query: 66  KSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPT- 119
              DLE A  L++ M E N+    V++  ++SA V  GL E+    +  MS++ G  PT 
Sbjct: 401 NGQDLE-ALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTP 459

Query: 120 --HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH---A 174
             +  + ++F  S       H  +   L+  +  + N  +   +LS+    G  KH   A
Sbjct: 460 DHYACMVNLFGRSG------HMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMA 513

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
                E++  N V +  + +  A   R  +   +  LM  K V
Sbjct: 514 ARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHV 556


>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 173/492 (35%), Positives = 275/492 (55%), Gaps = 36/492 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+Q+HCL +  GF +D  + N L+ MY+K GD  SA  ++  + +++ +S N++I GY  
Sbjct: 63  GKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGY-- 120

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                            VR+GD+   R++FD MP   +++WNAM
Sbjct: 121 ---------------------------------VRAGDLVNARKVFDEMPDRKLTTWNAM 147

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           ++   Q E ++E + LFREM   G  PD  TL  + S  A +  +  G+Q+H  ++K   
Sbjct: 148 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 207

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
            +D  V S L  +Y +  + +  E V   +P  ++V WN++I G + N         +K 
Sbjct: 208 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 267

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M+ +   P + +F TVLSSC+ L+   QG+Q+HA+  K G  + + V S+LI MY KCG 
Sbjct: 268 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 327

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI-ASGVKPDDITFVAILT 614
           +  A + F     ++ V W+ MI  Y  +G GDEA+ L+  M   + ++ +++ F+ +L 
Sbjct: 328 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 387

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           ACSHSGL D G+E+F+ M   +G +P L HYTC++D LGRAG   +AE +I  MP K D 
Sbjct: 388 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDI 447

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           VIW+ LLS+C +H N  +A+R  +E+ ++DP +SA Y LLAN+++S  RW D+  VR+ M
Sbjct: 448 VIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSM 507

Query: 735 SENCIVKDPAYS 746
            +  + K+   S
Sbjct: 508 RDKNVKKEAGIS 519



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 205/415 (49%), Gaps = 25/415 (6%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +GK LH  ++ +G   D F+CN L+ +YSK  +  SA  ++ +M  K+  S N +++   
Sbjct: 62  SGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYV 121

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++ DL  A K+FDEMP+R + +WN +I+ L++    E+ LS++ +M   GF P   TL S
Sbjct: 122 RAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGS 181

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           VF  S  L  V  G++ HG  IK GL+ ++ V ++L  +Y + G  +    V   M   N
Sbjct: 182 VFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRN 241

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +  ++ G A+       L ++++M       + ++  +VL  C        SD+  +
Sbjct: 242 LVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSC--------SDLAIR 293

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     GQQ+H   IK+G  + + + +SL+ MY+K G +  A   FS   +   V 
Sbjct: 294 G--------QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM 345

Query: 306 WNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           W+ MI+ YG   Q  +AIEL   M +    E +EV  +N+L AC  SG    G E+FD M
Sbjct: 346 WSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM 405

Query: 365 P-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                  P +  +  ++    ++    +A  + R M    +K D      +LS+C
Sbjct: 406 VEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMP---IKTDIVIWKTLLSAC 457



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 34/220 (15%)

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           F++ R N    T   F   + SC    S   G+Q+H  +   G+ +D F+ + L+ MY K
Sbjct: 33  FQRFRLNIFTNTSL-FTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSK 91

Query: 553 CGD------IYG-------------------------ARQFFDMMHGKNTVTWNEMIHGY 581
            GD      +YG                         AR+ FD M  +   TWN MI G 
Sbjct: 92  LGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGL 151

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
            Q  + +E + L+++M   G  PD+ T  ++ +  +    V +G +I +   + +G+E  
Sbjct: 152 IQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQI-HGYTIKYGLELD 210

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           L   + +     R G   + E++I  MP + + V W  L+
Sbjct: 211 LVVNSSLAHMYMRNGKLQDGEIVIRSMPVR-NLVAWNTLI 249


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 182/477 (38%), Positives = 277/477 (58%), Gaps = 21/477 (4%)

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK-AIELLQRMKSCG 333
           SN L+  Y + GD+DSA  +F ++  +S V+WN ++A + +K    + A +L +++    
Sbjct: 44  SNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIP--- 100

Query: 334 FEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
            +P+ V S N+++AC      +   R  FDSMP   V+SWN M+S+ +Q     EA +LF
Sbjct: 101 -QPNTV-SYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLF 158

Query: 393 REMQFRGVKPDR--TTLAIILSSCAAMGILESGKQ-VHAASLKTASHIDNYVASGLIGIY 449
             M      P++   + + ++S   A G L++  +  +AA +++         + +I  Y
Sbjct: 159 SAM------PEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSV-----ITWTAMITGY 207

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            K  R ELAER+F  +    +V WN+MIAG   N    +    F+ M +  + P   S  
Sbjct: 208 MKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLT 267

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           +VL  C+ LS+   G+QVH  + K    +D   G++L+ MY KCGD+  A + F  +  K
Sbjct: 268 SVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRK 327

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           + V WN MI GYAQ+G G +A+RL+ +M   G+KPD ITFVA+L AC+H+GLVD+GV+ F
Sbjct: 328 DVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYF 387

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           N+M+ D G+E   +HY CM+D LGRAG   EA  LI  MP K  P I+  LL +CR+H N
Sbjct: 388 NTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKN 447

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + LA+ AA+ L  LDP  +  Y  LAN+Y++  RWD + ++R  M +N +VK P YS
Sbjct: 448 LNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYS 504



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 197/441 (44%), Gaps = 67/441 (15%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD- 69
           H H   N   ++    N+LI  Y +C +  SA  +F+ M  K   +WN+IL+A  K    
Sbjct: 32  HQHEFNN---NNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGH 88

Query: 70  LEFAYKLF-------------------------------DEMPERNVVSWNNLISALVRN 98
            E+A +LF                               D MP ++V SWN +ISAL + 
Sbjct: 89  FEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQV 148

Query: 99  GLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVA 158
           GL  +A  +++ M  +  V    + +++     A  D++    C          +++   
Sbjct: 149 GLMGEARRLFSAMPEKNCV----SWSAMVSGYVACGDLDAAVEC----FYAAPMRSVITW 200

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
            A+++ Y K G  + A  +F+EMS    VT+ AM++G  +  R  + L +FR M+   V 
Sbjct: 201 TAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVK 260

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            +++SL+SVL  C+                  S    G+QVH L  K    +D     SL
Sbjct: 261 PNALSLTSVLLGCS----------------NLSALQLGKQVHQLVCKCPLSSDTTAGTSL 304

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           + MY+K GD+  A  +F  +P + VV WN MI+GY Q     KA+ L   MK  G +PD 
Sbjct: 305 VSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDW 364

Query: 339 VTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFR 393
           +T + +L+AC  +G +  G + F++M            +  M+    ++    EA+ L +
Sbjct: 365 ITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIK 424

Query: 394 EMQFRGVKPDRTTLAIILSSC 414
            M F   KP       +L +C
Sbjct: 425 SMPF---KPHPAIYGTLLGAC 442



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 20/190 (10%)

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN-GYGDEAVRLYKD 596
           N++   + LI  Y +CGDI  A + F+ M  K+TVTWN ++  +A+  G+ + A +L++ 
Sbjct: 39  NNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEK 98

Query: 597 MIASGVKPDDITFVAILTAC--SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           +     +P+ +++  I+ AC   H G+ D     F+SM L       +  +  MI  L +
Sbjct: 99  I----PQPNTVSY-NIMLACHWHHLGVHD-ARGFFDSMPLKD-----VASWNTMISALAQ 147

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA-PYSL 713
            G   EA  L   MP K + V W  ++S      ++     AA E F   P  S   ++ 
Sbjct: 148 VGLMGEARRLFSAMPEK-NCVSWSAMVSGYVACGDL----DAAVECFYAAPMRSVITWTA 202

Query: 714 LANIYSSLGR 723
           +   Y   GR
Sbjct: 203 MITGYMKFGR 212



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 4/117 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  + +  L  DT     L+ +YSKC +   A  LF ++P KD+  WNA++S   +
Sbjct: 282 GKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQ 341

Query: 67  SDDLEFAYKLFDEMPERNV-VSWNNLISALV---RNGLEEKALSVYNKMSNEGFVPT 119
               + A +LFDEM +  +   W   ++ L+     GL +  +  +N M  +  + T
Sbjct: 342 HGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIET 398



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 14/157 (8%)

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA-CSHSGLVDVGVEI 628
           N +  N++I  Y + G  D AVR+++DM         +T+ +IL A     G  +   ++
Sbjct: 40  NVIASNKLIASYVRCGDIDSAVRVFEDMKVKST----VTWNSILAAFAKKPGHFEYARQL 95

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F  +      +P    Y  M+ C       H+A    D MP K D   W  ++S+    A
Sbjct: 96  FEKIP-----QPNTVSYNIMLACHWHHLGVHDARGFFDSMPLK-DVASWNTMISAL---A 146

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
            V L   A      +  KN   +S + + Y + G  D
Sbjct: 147 QVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLD 183


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 168/491 (34%), Positives = 282/491 (57%), Gaps = 35/491 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+QVH L I  G   D  +SN LL+ Y+K G   S+ V+FSN+P R+V+S+N++I GY  
Sbjct: 81  GKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGY-- 138

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                            ++ GD+++ +++FD M   ++++WNAM
Sbjct: 139 ---------------------------------LQLGDLESAQKLFDEMSERNIATWNAM 165

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           ++  +Q E +K+A+ LF+EM   G  PD  TL  +L  CA +  L +G++VHA  LK   
Sbjct: 166 IAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGF 225

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
            + + V S L  +Y K       E++   +P   +V WN++IAG + N    E    +  
Sbjct: 226 ELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNM 285

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M+     P + +F +VLS+C++L++  QG+Q+HA++ K G  + + V S+LI MY + G 
Sbjct: 286 MKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGC 345

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  + + F      + V W+ MI  Y  +G G+EA+ L+  M    ++ +++TF+++L A
Sbjct: 346 LEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYA 405

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           CSHSGL + G E F+ M   + ++P ++HYTC++D LGRAG   EAE +I  MP + D +
Sbjct: 406 CSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGI 465

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMS 735
           IW+ LL++C+LH    +A+R +EE+ +LDP ++A Y LL+NI++S   W ++  +R+ M 
Sbjct: 466 IWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMR 525

Query: 736 ENCIVKDPAYS 746
           +  + K+P  S
Sbjct: 526 DRSVRKEPGIS 536



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 204/414 (49%), Gaps = 24/414 (5%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +H+ I+ +G   D F+ N L+  YSK     S+  LF  MP +++ S+N +++   
Sbjct: 80  GGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYL 139

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           +  DLE A KLFDEM ERN+ +WN +I+ L +    ++ALS++ +M   GF+P   TL S
Sbjct: 140 QLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGS 199

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V +    L  +  G+  H  ++K G + +  V ++L  +Y K G       + + M    
Sbjct: 200 VLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRT 259

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +  +++G A+     E L  + +M       D ++  SVL  C+      E     Q
Sbjct: 260 VVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS------ELATLGQ 313

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     GQQ+H   IK G  + L + +SL+ MY+++G ++ +   F +     VV 
Sbjct: 314 ----------GQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVL 363

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W+ MIA YG   +  +A+EL  +M+    E +EVT +++L AC  SG  + G E FD M 
Sbjct: 364 WSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMV 423

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                 P +  +  ++    ++   +EA  + R M    V+PD      +L++C
Sbjct: 424 KKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMP---VQPDGIIWKTLLAAC 474



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 151/318 (47%), Gaps = 35/318 (11%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC---------- 452
           D +  + +L SC  +G L  GKQVH+  + +    D ++++ L+  YSK           
Sbjct: 61  DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLF 120

Query: 453 ----QRN-----------------ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
               +RN                 E A+++F  + E +I  WN+MIAGL+    + +A  
Sbjct: 121 SNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALS 180

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            FK+M      P +F+  +VL  CA L S   G++VHA + K G+     VGS+L  MY 
Sbjct: 181 LFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYI 240

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           K G +    +    M  +  V WN +I G AQNG  +E +  Y  M  +G +PD ITFV+
Sbjct: 241 KSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVS 300

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA-EMLIDEMPC 670
           +L+ACS    +  G +I   + +  G   +L   + +I    R+G   ++ +  +D    
Sbjct: 301 VLSACSELATLGQGQQIHAEV-IKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRE-- 357

Query: 671 KDDPVIWEVLLSSCRLHA 688
             D V+W  ++++   H 
Sbjct: 358 NFDVVLWSSMIAAYGFHG 375



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 133/313 (42%), Gaps = 49/313 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           ++ +AG+ +HA +L+ G    + + + L  +Y K  +    + L   MP + + +WN   
Sbjct: 208 RSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNT-- 265

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                                        LI+   +NG  E+ L+ YN M   GF P  I
Sbjct: 266 -----------------------------LIAGKAQNGCPEEVLNQYNMMKMAGFRPDKI 296

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  SV  A + L  +  G++ H  VIK G    + V ++L+S+Y++ G  + ++  F + 
Sbjct: 297 TFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDR 356

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE-S 240
              + V +++M++      R  EALE+F  M    +  + V+  S+L  C+  G   + +
Sbjct: 357 ENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGT 416

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP- 299
           + F     K+      +   C                ++D+  + G ++ AE +  ++P 
Sbjct: 417 EYFDLMVKKYKLKPRIEHYTC----------------VVDLLGRAGRLEEAEGMIRSMPV 460

Query: 300 ERSVVSWNVMIAG 312
           +   + W  ++A 
Sbjct: 461 QPDGIIWKTLLAA 473



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 33/215 (15%)

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK------ 552
           +E++     F+ +L SC KL S F G+QVH+ I   G   D F+ + L+  Y K      
Sbjct: 56  SEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKS 115

Query: 553 -------------------------CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
                                     GD+  A++ FD M  +N  TWN MI G  Q  + 
Sbjct: 116 SLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFN 175

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
            +A+ L+K+M   G  PD+ T  ++L  C+    +  G E+   + L  G E      + 
Sbjct: 176 KQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACL-LKCGFELSSVVGSS 234

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           +     ++G   + E LI  MP +   V W  L++
Sbjct: 235 LAHMYIKSGSLSDGEKLIKSMPIR-TVVAWNTLIA 268


>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 211/693 (30%), Positives = 361/693 (52%), Gaps = 50/693 (7%)

Query: 74  YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT--HITLASVFKAST 131
           ++  D+ P+  + S N  +   +R  L  +AL ++ K    GFV     +T+A V KA  
Sbjct: 32  HQPLDQSPQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACC 91

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
              D + G + H   I  G   ++ V N+L+++Y K G    A+ VFE ++ P+ V++  
Sbjct: 92  G--DSKLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNT 149

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           ++SG  ++D   +AL     M    V+ D+V+ ++VL  C+      E  +F        
Sbjct: 150 VLSGFQRSD---DALNFALRMNFTGVAFDAVTCTTVLAFCSDH----EGFIF-------- 194

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK----------NGDMDSAEVIFSNLPER 301
               G Q+H   +K G + ++ + N+L+ MY++          N  +++  V    L E 
Sbjct: 195 ----GFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRGNSGLEAILVFLEMLKEG 250

Query: 302 ---SVVSWNVMIA--GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-RSGDIK 355
                VS+   I+  G+G++++  + I  L      G++   V   N+L++   +  DI+
Sbjct: 251 MKLDHVSFTGAISACGHGKEFELGRQIHSLA--VKIGYDT-HVKVCNVLISTYSKCEDIE 307

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
             + +F+S+   +V SW  M+S      + ++A  LF EM+  GV P+  T   ++ +  
Sbjct: 308 DAKLVFESIIDRNVVSWTTMISI-----SEEDATSLFNEMRRDGVYPNDVTFVGLIHAIT 362

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
              ++E G+ +H   +KT+   +  V++ LI +Y+K +    + +VF  +   +I+ WNS
Sbjct: 363 MKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNS 422

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS--SSFQGRQVHAQIEK 533
           +I+G + N L  EA   F      E  P +F+F +VLSS A     S   G++ H+ I K
Sbjct: 423 LISGYAQNGLWQEALQTFLSALM-ESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILK 481

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G   +  V SAL++MY K G I  +   F     KN V W  +I  +A++G  +  + L
Sbjct: 482 LGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNL 541

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +KDM   GVKPD ITF+A++TAC   G+VD G ++FNSM  DH +EP  +HY+ M+D LG
Sbjct: 542 FKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLG 601

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           RAG   EAE  + ++P      + + LL +CR+H NV +AKR A++L  ++P  S  Y L
Sbjct: 602 RAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVL 661

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++N+Y+  G W+ +  +R+ M E  + K+  +S
Sbjct: 662 MSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFS 694



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/583 (22%), Positives = 265/583 (45%), Gaps = 92/583 (15%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N++++  CK+   + A  +F+ +   ++VSWN ++S   R+   + AL+   +M+  G  
Sbjct: 117 NSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRS---DDALNFALRMNFTGVA 173

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
              +T  +V    +       G + H  ++K GLD  ++V NAL+++Y++C     A   
Sbjct: 174 FDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEA--- 230

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
                               + +  +EA+ +F  M+++ + +D VS +  +  C   G G
Sbjct: 231 -------------------RRGNSGLEAILVFLEMLKEGMKLDHVSFTGAISAC---GHG 268

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
            E ++             G+Q+H L +K+G++  + + N L+  Y+K  D++ A+++F +
Sbjct: 269 KEFEL-------------GRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFES 315

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           + +R+VVSW  MI+          A  L   M+  G  P++VT + ++ A      ++ G
Sbjct: 316 IIDRNVVSWTTMIS-----ISEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEG 370

Query: 358 R-----------------------------------EMFDSMPSPSVSSWNAMLSSYSQS 382
           +                                   ++F+ +    + SWN+++S Y+Q+
Sbjct: 371 QMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQN 430

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI--LESGKQVHAASLKTASHIDNY 440
              +EA++ F        +P+  T   +LSS A+     +  G++ H+  LK   + +  
Sbjct: 431 GLWQEALQTFLSALMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPI 489

Query: 441 VASGLIGIYSKCQRNELAER--VFHRIPELDIVCWNSMIAGLSLNSLDIEAFM-FFKQMR 497
           V+S L+ +Y+K  R  + E   VF   P  + V W ++I+  + +  D EA M  FK M 
Sbjct: 490 VSSALLDMYAK--RGSICESLGVFSETPLKNEVAWTAIISAHARHG-DYEAVMNLFKDME 546

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDI 556
           +  + P   +F  V+++C +      G Q+   + KD  +       S++++M  + G +
Sbjct: 547 REGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRL 606

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQ-NGYGDEAVRLYKDMI 598
             A +F   + G   ++  + + G  + +G  D A R+  D+I
Sbjct: 607 KEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLI 649



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 133/546 (24%), Positives = 236/546 (43%), Gaps = 111/546 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA  + +G      + N L+ +Y K      A  +F+ + + DI SWN +LS   +
Sbjct: 97  GCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQR 156

Query: 67  SDD-LEFAYKL------FDEMPERNVVSW-----------------------------NN 90
           SDD L FA ++      FD +    V+++                             N 
Sbjct: 157 SDDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNA 216

Query: 91  LISALVR-----------NGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           LI+   R           +GLE  A+ V+ +M  EG    H++      A     + E G
Sbjct: 217 LITMYSRCCRLVEARRGNSGLE--AILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELG 274

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           R+ H L +KIG D ++ V N L+S Y+KC   + A  VFE + + N V++T M+S +++ 
Sbjct: 275 RQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS-ISEE 333

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
           D    A  +F  M R  V  + V+   ++     +    E                GQ +
Sbjct: 334 D----ATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEE----------------GQMI 373

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H + +K  F ++L++SNSL+ MYAK   M  +  +F  L  R ++SWN +I+GY Q    
Sbjct: 374 HGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLW 433

Query: 320 TKAIELL--------------------------------QRMKS----CGFEPDEVTSIN 343
            +A++                                  QR  S     G   + + S  
Sbjct: 434 QEALQTFLSALMESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSA 493

Query: 344 MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
           +L    + G I     +F   P  +  +W A++S++++  +++  + LF++M+  GVKPD
Sbjct: 494 LLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPD 553

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLK---TASHIDNYVASGLIGIYSKCQRNELAER 460
             T   ++++C   G++++G Q+  + +K        ++Y  S ++ +  +  R + AE 
Sbjct: 554 SITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHY--SSMVDMLGRAGRLKEAEE 611

Query: 461 VFHRIP 466
              +IP
Sbjct: 612 FVGQIP 617



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 199/429 (46%), Gaps = 67/429 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+  ++ G      +CN LI  YSKC +   A+ +F+ +  +++ SW  ++S    
Sbjct: 274 GRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISIS-- 331

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                             EE A S++N+M  +G  P  +T   +
Sbjct: 332 ----------------------------------EEDATSLFNEMRRDGVYPNDVTFVGL 357

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A T    VE G+  HG+ +K      + V+N+L+++YAK      ++ VFEE++    
Sbjct: 358 IHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREI 417

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVESDVFAQ 245
           +++ +++SG A+     EAL+ F   + ++   +  +  SVL  + + E   +       
Sbjct: 418 ISWNSLISGYAQNGLWQEALQTFLSALMESRP-NEFTFGSVLSSIASAEAISMR------ 470

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                    HGQ+ H   +KLG   +  +S++LLDMYAK G +  +  +FS  P ++ V+
Sbjct: 471 ---------HGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVA 521

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  +I+ + +       + L + M+  G +PD +T + ++ AC R G + TG ++F+SM 
Sbjct: 522 WTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMV 581

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI---ILSSCAAM 417
                 PS   +++M+    ++   KEA       +F G  P    L++   +L +C   
Sbjct: 582 KDHLIEPSPEHYSSMVDMLGRAGRLKEA------EEFVGQIPGGAGLSVLQSLLGACRIH 635

Query: 418 GILESGKQV 426
           G ++  K+V
Sbjct: 636 GNVDMAKRV 644


>gi|255546193|ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546612|gb|EEF48110.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 885

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 198/661 (29%), Positives = 338/661 (51%), Gaps = 82/661 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H +++++GL  D+ L   LI LY+KC +                            
Sbjct: 112 GTAIHGNVIKSGLEPDSHLWVSLINLYAKCGS---------------------------- 143

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L FA K+   M ER+VVSW  LI+  V  G     +  Y +M  E   P   TLA+V
Sbjct: 144 ---LAFARKVLVGMRERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATV 200

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KAS+   D++ G+  H   IK GL  +++V +AL+ LYAK G  + A  VF  M E N 
Sbjct: 201 LKASSMCSDIKFGKLIHLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNN 260

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+++G A+       L++F  M+   ++  + +LS+VL  CA  G   E       
Sbjct: 261 VSWNALLNGYAQRGDGKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLRE------- 313

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ +H L+I+  +E D  L  +L+DMY+K G    A  +F+ + E  +V+W
Sbjct: 314 ---------GKALHSLSIRRAYELDEFLGCNLVDMYSKCGMAYEALKVFNMIEEPDIVAW 364

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA---------------CV-- 349
           + +I G  Q+  S +A EL   M+  G  P++ +  +++ A               C+  
Sbjct: 365 SAIITGLDQQGHSQEAAELFHLMRQKGVRPNQFSFASVISAATNVGDLYLGQSIHCCICK 424

Query: 350 ------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             +SG ++ G  +FD+M +  + SWNA+LS +   E   + +++
Sbjct: 425 YGYESDNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLSGFYDFETSDQGLRI 484

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +M   G+ P+  T   +L SC+++  +  GKQVHA  +K +   +++V + LI +Y+K
Sbjct: 485 FCQMLMEGLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLDGNDFVGTALIDMYAK 544

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
            +  E A+  F+++   D+  W  +IAG S      +A  +  QM +  + P +F+ A+ 
Sbjct: 545 NRCLEDADVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREGIKPNEFTLASC 604

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           LS C+++++   G+Q+H+   K G+  D+FV SAL++MY KCG +  A   F  +  ++T
Sbjct: 605 LSGCSRMATLGNGQQLHSLAIKSGHSGDVFVSSALVDMYGKCGCMEDAEAIFKGLFSRDT 664

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           V WN +I GY+Q+G G +A+  ++ M+   + PD++TF+ +L ACS+ G V+ G + F+ 
Sbjct: 665 VAWNTIICGYSQHGQGQKALEAFRMMLDEDIDPDEVTFIGVLAACSYMGWVEEGKKHFDL 724

Query: 632 M 632
           M
Sbjct: 725 M 725



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 162/604 (26%), Positives = 294/604 (48%), Gaps = 57/604 (9%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           ++  G   HG VIK GL+ + ++  +L++LYAKCG    A  V   M E + V++TA+++
Sbjct: 108 NLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMRERDVVSWTALIA 167

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
           G        + ++ +  M ++ +  +  +L++VL   A   C         SD KF    
Sbjct: 168 GYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLK--ASSMC---------SDIKF---- 212

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            G+ +H   IK G   DL + ++L+D+YAK G+M+ A+ +F  +PE++ VSWN ++ GY 
Sbjct: 213 -GKLIHLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYA 271

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------- 358
           Q+      ++L  RM  C       T   +L  C  SG+++ G+                
Sbjct: 272 QRGDGKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEF 331

Query: 359 -------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                              ++F+ +  P + +W+A+++   Q  + +EA +LF  M+ +G
Sbjct: 332 LGCNLVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKG 391

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V+P++ + A ++S+   +G L  G+ +H    K     DN V + LI +Y K    +   
Sbjct: 392 VRPNQFSFASVISAATNVGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGI 451

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           RVF  +   D+V WN++++G        +    F QM    + P  ++F  VL SC+ L 
Sbjct: 452 RVFDTMTNRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCSSLL 511

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           + + G+QVHA I K+    + FVG+ALI+MY K   +  A   F+ +  ++  TW  +I 
Sbjct: 512 NVWFGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVIIA 571

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G++Q    ++AV+    M+  G+KP++ T  + L+ CS    +  G ++ +S+ +  G  
Sbjct: 572 GHSQTDKAEKAVKYLGQMLREGIKPNEFTLASCLSGCSRMATLGNGQQL-HSLAIKSGHS 630

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
             +   + ++D  G+ G   +AE +   +  + D V W  ++     H       + A E
Sbjct: 631 GDVFVSSALVDMYGKCGCMEDAEAIFKGLFSR-DTVAWNTIICGYSQHGQ----GQKALE 685

Query: 700 LFRL 703
            FR+
Sbjct: 686 AFRM 689



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 160/557 (28%), Positives = 262/557 (47%), Gaps = 50/557 (8%)

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
           ID    + ++   ++E     S +  +  +K + N  G  +H   IK G E D HL  SL
Sbjct: 76  IDKSETNEIISFASKEVLKRYSGMLRECASKGNLN-EGTAIHGNVIKSGLEPDSHLWVSL 134

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +++YAK G +  A  +   + ER VVSW  +IAGY  +   +  ++    M+     P+E
Sbjct: 135 INLYAKCGSLAFARKVLVGMRERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNE 194

Query: 339 VTSINMLVACVRSGDIKTGR-----------------------------------EMFDS 363
            T   +L A     DIK G+                                    +F  
Sbjct: 195 FTLATVLKASSMCSDIKFGKLIHLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFG 254

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           MP  +  SWNA+L+ Y+Q  + K  +KLF  M    +     TL+ +L  CA  G L  G
Sbjct: 255 MPEKNNVSWNALLNGYAQRGDGKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREG 314

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           K +H+ S++ A  +D ++   L+ +YSKC     A +VF+ I E DIV W+++I GL   
Sbjct: 315 KALHSLSIRRAYELDEFLGCNLVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQ 374

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               EA   F  MRQ  + P QFSFA+V+S+   +   + G+ +H  I K GY +D  VG
Sbjct: 375 GHSQEAAELFHLMRQKGVRPNQFSFASVISAATNVGDLYLGQSIHCCICKYGYESDNSVG 434

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           +ALI MY K G +    + FD M  ++ V+WN ++ G+      D+ +R++  M+  G+ 
Sbjct: 435 NALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGLV 494

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY----TCMIDCLGRAGHFH 659
           P+  TFV +L +C  S L++V    F      H ++  LD      T +ID   +     
Sbjct: 495 PNLYTFVGVLRSC--SSLLNV---WFGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLE 549

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL-LANIY 718
           +A++  +++  + D   W V+++    H+    A++A + L ++  +   P    LA+  
Sbjct: 550 DADVAFNKLTNR-DLFTWTVIIAG---HSQTDKAEKAVKYLGQMLREGIKPNEFTLASCL 605

Query: 719 SSLGRWDDLRAVRELMS 735
           S   R   L   ++L S
Sbjct: 606 SGCSRMATLGNGQQLHS 622



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 66/247 (26%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HAHI++N L  + F+   LI++Y+K                            +C 
Sbjct: 516 GKQVHAHIIKNSLDGNDFVGTALIDMYAK---------------------------NRC- 547

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              LE A   F+++  R++ +W  +I+   +    EKA+    +M  EG  P   TLAS 
Sbjct: 548 ---LEDADVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREGIKPNEFTLASC 604

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF-------- 178
               + +  + +G++ H L IK G   +++V++AL+ +Y KCG  + A  +F        
Sbjct: 605 LSGCSRMATLGNGQQLHSLAIKSGHSGDVFVSSALVDMYGKCGCMEDAEAIFKGLFSRDT 664

Query: 179 ---------------------------EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
                                      +E  +P+EVTF  +++  +    V E  + F L
Sbjct: 665 VAWNTIICGYSQHGQGQKALEAFRMMLDEDIDPDEVTFIGVLAACSYMGWVEEGKKHFDL 724

Query: 212 MIRKAVS 218
           M +   S
Sbjct: 725 MSKSLCS 731


>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
 gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
          Length = 683

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 177/624 (28%), Positives = 320/624 (51%), Gaps = 47/624 (7%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           +++S+  + T L  +  G++ H   I +G + ++ +   L++ Y+       A  +    
Sbjct: 43  SISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNS 102

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              N + +  ++S         EAL  +R M+ K V  D+ +  SVL  C          
Sbjct: 103 DIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGE-------- 154

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
              + D  F R VH      +    G   +L++ NSL+ MY K G++D+A  +F+ +PER
Sbjct: 155 ---KLDLDFGREVH----ESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPER 207

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
             VSWN +I+ Y  +    +A EL + M+  G E + +T                     
Sbjct: 208 DAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNIIT--------------------- 246

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                     WN +     Q+ N K A++L  +M+   +  D   + I L +C+ +G ++
Sbjct: 247 ----------WNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIK 296

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G  +HA+++++     + V + LI +YS+C+    A+ +F  I    +  WNSM++G +
Sbjct: 297 LGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYT 356

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI-EKDGYVNDI 540
                 EA   F++M  + + P   + A++L  CA++++  QG++ H  I  ++G+ + +
Sbjct: 357 HMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYL 416

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            + ++L+EMY + G +  A++ FD +  ++ VT+  +I GY   G G  A++L+ +MI  
Sbjct: 417 LLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKH 476

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
            +KPD +T VA+L+ACSHSGLV  G  +F  M   +G+ P ++H++CM+D  GRAG  ++
Sbjct: 477 RIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNK 536

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           A+ +I  MP +    +W  L+ +CR+H N  + + AAE+L  + P+N   Y L+AN++++
Sbjct: 537 AKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYVLIANMHAA 596

Query: 721 LGRWDDLRAVRELMSENCIVKDPA 744
            GRW  L  VR  M +  + K P 
Sbjct: 597 AGRWSKLAEVRTYMRDLGVRKAPG 620



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 207/413 (50%), Gaps = 29/413 (7%)

Query: 22  DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEM- 80
           + ++ N L+ +Y K     +A+ LF++MP +D  SWN I+S        + A++LF+EM 
Sbjct: 177 NLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMR 236

Query: 81  ---PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVE 137
               E N+++WN +    V+    + AL + ++M         + +     A + +  ++
Sbjct: 237 LAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIK 296

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
            G   H   I+   D    V NAL+++Y++C   +HA  +F+ +   +  T+ +M+SG  
Sbjct: 297 LGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYT 356

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
             DR  EA  +FR M+   +  + V+++S+L  CAR                 +    G+
Sbjct: 357 HMDRSEEASFLFREMLFSGIEPNYVTIASILPHCAR----------------VANLQQGK 400

Query: 258 QVHCLTIKL-GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           + HC  ++  GFE  L L NSL++MYA++G + SA+ +F +L  R  V++  +IAGYG +
Sbjct: 401 EFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQ 460

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSS 371
            +   A++L   M     +PD+VT + +L AC  SG +  G  +F+ M +     P+V  
Sbjct: 461 GEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEH 520

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           ++ M+  + ++    +A K+   M +R   P     A ++ +C   G  E G+
Sbjct: 521 FSCMVDLFGRAGLLNKAKKVITSMPYR---PTTAMWATLVGACRIHGNTEIGE 570



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 209/473 (44%), Gaps = 87/473 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHAH +  G  +   L  +L+  YS                     S++ +  A   
Sbjct: 60  GKQLHAHTISLGFENHLVLVPKLVTFYS---------------------SFSLLADAHTI 98

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           + + +            N + WN LIS+ V NGL  +ALS Y +M ++G  P + T  SV
Sbjct: 99  TVNSDIV----------NPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSV 148

Query: 127 FKASTALLDVEHGRRCH-GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
            KA    LD++ GR  H  +    G   N+YV N+L+S+Y K G    A  +F +M E +
Sbjct: 149 LKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERD 208

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR------------ 233
            V++  ++S  A      EA E+F  M      ++ ++ +++ G C +            
Sbjct: 209 AVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLS 268

Query: 234 --EGCGVESDVFAQ-----SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
               C ++ D  A      + +       G  +H   I+  F+   ++ N+L+ MY++  
Sbjct: 269 QMRRCDIDLDPVAMIIGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCK 328

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
           D+  A+++F ++  +S+ +WN M++GY    +S +A  L + M   G EP+ VT  ++L 
Sbjct: 329 DLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILP 388

Query: 347 ACVRSGDIKTGRE------------------------------------MFDSMPSPSVS 370
            C R  +++ G+E                                    +FDS+      
Sbjct: 389 HCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKV 448

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           ++ ++++ Y      K A+KLF EM    +KPD+ T+  +LS+C+  G++  G
Sbjct: 449 TYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEG 501



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 6/118 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLC-NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK  H +I+R   F+D  L  N L+E+Y++     SA+ +FD +  +D  ++ ++++   
Sbjct: 399 GKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYG 458

Query: 66  KSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSN-EGFVP 118
              + + A KLFDEM +  +    V+   ++SA   +GL  +   ++ KMS   G VP
Sbjct: 459 IQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVP 516


>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 824

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 223/741 (30%), Positives = 363/741 (48%), Gaps = 72/741 (9%)

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT- 119
           LS  C+  + + A +LFD +P+   V WN +I   + N L  +AL  Y++M         
Sbjct: 46  LSKICQEGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKC 105

Query: 120 -HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA---- 174
              T +S  KA     +++ G+  H  +I+   + +  V N+L+++Y  C     +    
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDC 165

Query: 175 ------VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
                   VF+ M   N V +  ++S   KT R  EA   F +M+R  +    VS  +V 
Sbjct: 166 FEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVF 225

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE--ADLHLSNSLLDMYAKNG 286
              A      +++VF                + L +KLG E   DL + +S + MYA+ G
Sbjct: 226 PAVATSRSIKKANVF----------------YGLMLKLGDEYVKDLFVVSSAISMYAELG 269

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL-LQRMKSCGFEPDEVTSI--- 342
           D++S+  +F +  ER++  WN MI  Y Q     ++IEL L+ + S     DEVT +   
Sbjct: 270 DLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAA 329

Query: 343 --------------------------------NMLVACVRSGDIKTGREMFDSMPSPSVS 370
                                           +++V   R G ++    +F SM    V 
Sbjct: 330 SAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVV 389

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           SWN M+S++ Q+    E + L  EMQ +G K D  T+  +LS+ + +   E GKQ H   
Sbjct: 390 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFL 449

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHR--IPELDIVCWNSMIAGLSLNSLDIE 488
           ++     +  + S LI +Y+K     +++++F      E D   WNSMI+G + N    E
Sbjct: 450 IRQGIQFEG-MNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEE 508

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIE 548
            F+ F++M +  + P   + A++L +C+++ S   G+Q+H    +     ++FV SAL++
Sbjct: 509 TFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVD 568

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDIT 608
           MY K G I  A   F     +N+VT+  MI GY Q+G G+ A+ L+  M   G+KPD I 
Sbjct: 569 MYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIA 628

Query: 609 FVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           FVA+L+ACS+SGLVD G++IF  M+  + ++P  +HY C+ D LGR G  +EA   +  +
Sbjct: 629 FVAVLSACSYSGLVDEGLKIFEDMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGL 688

Query: 669 PCKDDPV-IWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYS-LLANIYSSLGRWD 725
             + +   +W  LL SCRLH  + LA+  +E L +LD  KN + Y  LL+N+Y+    W 
Sbjct: 689 GEEGNIAELWGSLLGSCRLHGELELAETVSERLAKLDKGKNFSGYEVLLSNMYAEEQNWK 748

Query: 726 DLRAVRELMSENCIVKDPAYS 746
            +  VR+ M E  + K+   S
Sbjct: 749 SVDRVRKGMREKGLKKEVGRS 769



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/560 (24%), Positives = 250/560 (44%), Gaps = 96/560 (17%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQ----------HLFDKMPHKDIY 55
           AGK +H H++R        + N L+ +Y  C N   ++           +FD M  K++ 
Sbjct: 125 AGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFDNMRRKNVV 184

Query: 56  SWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG 115
           +WN                                LIS  V+ G   +A   +  M    
Sbjct: 185 AWNT-------------------------------LISWYVKTGRNAEACRQFAIMMRME 213

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLD--KNIYVANALLSLYAKCGWTKH 173
             P+ ++  +VF A      ++     +GL++K+G +  K+++V ++ +S+YA+ G  + 
Sbjct: 214 IKPSPVSFVNVFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLES 273

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSVSLSSVLGVCA 232
           +  VF+   E N   +  M+    + D +VE++E+F   I  K +  D V+   +L   A
Sbjct: 274 SRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTF--LLAASA 331

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G                +   G+Q H    K   E  + + NSL+ MY++ G +  + 
Sbjct: 332 VSG--------------LQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRCGFVQKSF 377

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---- 348
            +F ++ ER VVSWN MI+ + Q     + + L+  M+  GF+ D +T   +L A     
Sbjct: 378 GVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLR 437

Query: 349 ------------------------------VRSGDIKTGREMFD--SMPSPSVSSWNAML 376
                                          +SG I+  +++F+         ++WN+M+
Sbjct: 438 NKEIGKQTHGFLIRQGIQFEGMNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMI 497

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           S Y+Q+ + +E   +FR+M  + ++P+  T+A IL +C+ +G ++ GKQ+H  S++    
Sbjct: 498 SGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLD 557

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            + +VAS L+ +YSK    + AE +F +  E + V + +MI G   + +   A   F  M
Sbjct: 558 QNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 617

Query: 497 RQNEMYPTQFSFATVLSSCA 516
           ++  + P   +F  VLS+C+
Sbjct: 618 QELGIKPDAIAFVAVLSACS 637



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 181/324 (55%), Gaps = 28/324 (8%)

Query: 46  FDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKAL 105
           F ++P   I   N+++    +   ++ ++ +F  M ER+VVSWN +ISA V+NGL+++ L
Sbjct: 352 FRELP---IVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGL 408

Query: 106 SVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLD---KNIYVANALL 162
            +  +M  +GF   +IT+ ++  A++ L + E G++ HG +I+ G+     N Y    L+
Sbjct: 409 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEGMNSY----LI 464

Query: 163 SLYAKCGWTKHAVPVFE--EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
            +YAK G  + +  +FE    +E ++ T+ +M+SG  +     E   +FR M+ + +  +
Sbjct: 465 DMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPN 524

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
           +V+++S+L  C++ G     D+             G+Q+H  +I+   + ++ ++++L+D
Sbjct: 525 AVTVASILPACSQVG---SVDL-------------GKQLHGFSIRQYLDQNVFVASALVD 568

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MY+K G +  AE +FS   ER+ V++  MI GYGQ     +AI L   M+  G +PD + 
Sbjct: 569 MYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIA 628

Query: 341 SINMLVACVRSGDIKTGREMFDSM 364
            + +L AC  SG +  G ++F+ M
Sbjct: 629 FVAVLSACSYSGLVDEGLKIFEDM 652



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 193/413 (46%), Gaps = 55/413 (13%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY-NK 110
           KD++  ++ +S   +  DLE + ++FD   ERN+  WN +I   V+N    +++ ++   
Sbjct: 253 KDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEA 312

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           + ++  V   +T      A + L  VE GR+ HG V K   +  I + N+L+ +Y++CG+
Sbjct: 313 IGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRCGF 372

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            + +  VF  M E + V++  M+S   +     E L +   M ++   ID ++++++L  
Sbjct: 373 VQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL-- 430

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
                        + + N  ++ + G+Q H   I+ G + +  +++ L+DMYAK+G +  
Sbjct: 431 -------------SAASNLRNKEI-GKQTHGFLIRQGIQFE-GMNSYLIDMYAKSGLIRI 475

Query: 291 AEVIF--SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
           ++ +F  S   ER   +WN MI+GY Q   + +   + ++M      P+ VT  ++L AC
Sbjct: 476 SQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPAC 535

Query: 349 VRSGDIKTGRE-----------------------------------MFDSMPSPSVSSWN 373
            + G +  G++                                   MF      +  ++ 
Sbjct: 536 SQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYT 595

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
            M+  Y Q    + AI LF  MQ  G+KPD      +LS+C+  G+++ G ++
Sbjct: 596 TMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKI 648


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 175/472 (37%), Positives = 269/472 (56%), Gaps = 13/472 (2%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK-AIELLQRMKSCGF 334
           N  +  + +  D++SA  +F  +  R+ V+WN M++GY +     K A EL  ++     
Sbjct: 77  NKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP---- 132

Query: 335 EPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           EPD V+   MLV  +RS  ++     F+ MP   ++SWN ++S ++Q+   ++A  LF  
Sbjct: 133 EPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSV 192

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M     + +  + + ++S     G LE+ ++++    K        V + ++  Y K  +
Sbjct: 193 MP----EKNGVSWSAMISGYVEHGDLEAAEELY----KNVGMKSVVVETAMLTGYMKFGK 244

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            ELAER+F R+   ++V WNSMIAG   N    +    FK M ++ + P   S ++VL  
Sbjct: 245 VELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLG 304

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C+ LS+   GRQ+H  + K     D    ++LI MYCKCGD+  A + F  M  K+ ++W
Sbjct: 305 CSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISW 364

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI GYAQ+G G +A+ L+  M    +KPD ITFVA++ AC+H+G VD+GV+ F SM+ 
Sbjct: 365 NAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKK 424

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           + G+E    HYTC+ID LGRAG   EA  LI EMP K    I+  LL +CR+H N+ LA+
Sbjct: 425 EFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAE 484

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA  L  LDP ++  Y  LANIY++  +WD +  VR++M E+ +VK P YS
Sbjct: 485 FAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYS 536



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 195/416 (46%), Gaps = 64/416 (15%)

Query: 5   VAGKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           VAGK+  AH L + + + D+   N ++  Y +     +A   F+KMP KDI SWN ++S 
Sbjct: 117 VAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISG 176

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             ++  ++ A+ LF  MPE+N VSW+ +IS  V +G  E A  +Y               
Sbjct: 177 FAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYK-------------- 222

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
                                    +G+ K++ V  A+L+ Y K G  + A  +F+ M+ 
Sbjct: 223 ------------------------NVGM-KSVVVETAMLTGYMKFGKVELAERIFQRMAV 257

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N VT+ +M++G  +  R  + L++F+ MI   V  + +SLSSVL  C+           
Sbjct: 258 KNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCS----------- 306

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                  S    G+Q+H L  K     D     SL+ MY K GD+DSA  +F  +P + V
Sbjct: 307 -----NLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDV 361

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           +SWN MI+GY Q     KA+ L  +M++   +PD +T + +++AC  +G +  G + F S
Sbjct: 362 ISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKS 421

Query: 364 MPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           M            +  ++    ++    EA+ L +EM F   KP       +L +C
Sbjct: 422 MKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPF---KPHAAIYGTLLGAC 474


>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 177/526 (33%), Positives = 278/526 (52%), Gaps = 36/526 (6%)

Query: 258 QVHCLTIKLGFEADLHLSNSLL-DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           ++H L +  G   +L LS  L+         MD A  +F  +P+R V  WN +I GY   
Sbjct: 47  RIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADA 106

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------FDS----- 363
               +A+ L   M   G  PD  T   ++ +C     ++ G+E+        FDS     
Sbjct: 107 GPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQ 166

Query: 364 ----------------------MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                                 M   ++ SW A+++ Y Q+   KE + +FREM   G +
Sbjct: 167 SSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQ 226

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P+  TL  +L +CA +  L  GK +H   +K     D  + + LI +Y KC   E A  +
Sbjct: 227 PNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSL 286

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F  +   ++V WN+MIA    N+    A   F++M+  ++     +  +V+S+CA L + 
Sbjct: 287 FDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGAL 346

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             GR +H  +++ G   ++ + +ALI+MY KCG+I  AR+ F+ +  ++ V+W  MI   
Sbjct: 347 NTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGAC 406

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           A +G+G++A++L+  M   GVKP+  TF A+ TAC HSGLV+ G + F SM  D+ + P 
Sbjct: 407 ASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPG 466

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           ++H  CM+D LGRAG   EA   ID+MP + D  +W  LL SCR+H+N+ LA+  AE+LF
Sbjct: 467 VEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLF 526

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            LDP+    Y L++NIY+  GRW+D   +R+LM E  + K P +SL
Sbjct: 527 LLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSL 572



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 213/407 (52%), Gaps = 51/407 (12%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           + S   I++A C +  +++A K+FD+MP+R+V  WN LI      G  E+AL++Y+ M  
Sbjct: 62  LLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHG 121

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
            G  P + T   V ++   L  +  G+  H  ++K G D +++V ++L+++Y++ G T  
Sbjct: 122 AGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLG 181

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
              VF EM   N V++TA+++G  +     E L +FR M+      ++V+L SVL  CA 
Sbjct: 182 MELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACA- 240

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
              G+E   F            G+ +H   IKLG + D+ L+N+L+ +Y K G++++A  
Sbjct: 241 ---GLE---FLNL---------GKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARS 285

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +F  +  +++VSWN MIA Y Q      A++L +RM++   + D +T ++++ AC   G 
Sbjct: 286 LFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGA 345

Query: 354 IKTG-----------------------------------REMFDSMPSPSVSSWNAMLSS 378
           + TG                                   RE+F+ +P  SV SW +M+ +
Sbjct: 346 LNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGA 405

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
            +   + ++A+KLF  M+  GVKP+  T A + ++C   G++E G++
Sbjct: 406 CASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRK 452



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 222/470 (47%), Gaps = 58/470 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +I+++G   D F+ + L+ +YS+   T   +                       
Sbjct: 147 GKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGME----------------------- 183

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +F EM  RN+VSW  +I+  V+N   ++ L V+ +M   G  P  +TL SV
Sbjct: 184 --------LVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSV 235

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L  +  G+  HG  IK+G+D ++ + NAL++LY KCG  + A  +F+ M   N 
Sbjct: 236 LPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNL 295

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ AM++   + +    A+++FR M  + V  D +++ SV+  CA  G           
Sbjct: 296 VSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLG----------- 344

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               + N  G+ +H L  + G E ++ ++N+L+DMYAK G++D A  +F  LP RSVVSW
Sbjct: 345 ----ALNT-GRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSW 399

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
             MI           A++L  RMK  G +P+  T   +  AC  SG ++ GR+ F+SM  
Sbjct: 400 TSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMR 459

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P V     M+    ++ +  EA +   +M    V+PD +    +L SC     LE
Sbjct: 460 DYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMP---VEPDVSVWGALLGSCRIHSNLE 516

Query: 422 SGKQV-HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
             + V     L     +  YV   +  IY++  R E A R+   + E ++
Sbjct: 517 LAELVAEKLFLLDPQTVTFYVL--MSNIYAEAGRWEDAARLRKLMEEREL 564


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 190/642 (29%), Positives = 328/642 (51%), Gaps = 61/642 (9%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H  ++K G   +++  N LL+ Y K G+ K A+ +F+EM E N V+F  +  G A  D  
Sbjct: 72  HCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQD-- 129

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ---QV 259
                              + L S L    REG  +   VF      F      +    +
Sbjct: 130 ------------------PIGLYSRL---HREGHELNPHVFTSFLKLFVSLDKAEICPWL 168

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H   +KLG++++  +  +L++ Y+  G +DSA  +F  +  + +V W  +++ Y +    
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228

Query: 320 TKAIELLQRMKSCGFEPDEVT-----------------------------------SINM 344
             +++LL  M+  GF P+  T                                    + +
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288

Query: 345 LVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
           L    + GD+    ++F+ MP   V  W+ M++ + Q+    EA+ LF  M+   V P+ 
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
            TL+ IL+ CA       G+Q+H   +K    +D YV++ LI +Y+KC++ + A ++F  
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE 408

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           +   + V WN++I G        +AF  F++  +N++  T+ +F++ L +CA L+S   G
Sbjct: 409 LSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLG 468

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
            QVH    K      + V ++LI+MY KCGDI  A+  F+ M   +  +WN +I GY+ +
Sbjct: 469 VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTH 528

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G G +A+R+   M     KP+ +TF+ +L+ CS++GL+D G E F SM  DHG+EP L+H
Sbjct: 529 GLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEH 588

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           YTCM+  LGR+G   +A  LI+ +P +   +IW  +LS+     N   A+R+AEE+ +++
Sbjct: 589 YTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKIN 648

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           PK+ A Y L++N+Y+   +W ++ ++R+ M E  + K+P  S
Sbjct: 649 PKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLS 690



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/334 (33%), Positives = 174/334 (52%), Gaps = 21/334 (6%)

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
           D+  A+K+F+EMP+ +VV W+ +I+   +NG   +A+ ++ +M     VP   TL+S+  
Sbjct: 297 DMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILN 356

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
                     G + HGLV+K+G D +IYV+NAL+ +YAKC     AV +F E+S  NEV+
Sbjct: 357 GCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS 416

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           +  ++ G        +A  MFR  +R  VS+  V+ SS LG CA           A  D 
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS---------LASMD- 466

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                  G QVH L IK      + +SNSL+DMYAK GD+  A+ +F+ +    V SWN 
Sbjct: 467 ------LGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNA 520

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM---- 364
           +I+GY       +A+ +L  MK    +P+ +T + +L  C  +G I  G+E F+SM    
Sbjct: 521 LISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDH 580

Query: 365 -PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
              P +  +  M+    +S    +A+KL   + +
Sbjct: 581 GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPY 614



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 137/537 (25%), Positives = 242/537 (45%), Gaps = 48/537 (8%)

Query: 201 RVVEALEMFRLMIR-----------KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           R++   +  RLMIR           K  ++D  S  S++        G       Q ++ 
Sbjct: 6   RIIHVAQTRRLMIRCNRIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDP 65

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
            S     + +HC  +K G   DL  +N LL+ Y K G    A  +F  +PER+ VS+  +
Sbjct: 66  IS----AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTL 121

Query: 310 IAGYG------------------QKYQSTKAIEL---LQRMKSC----------GFEPDE 338
             GY                     +  T  ++L   L + + C          G++ + 
Sbjct: 122 AQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNA 181

Query: 339 VTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                ++ A    G + + R +F+ +    +  W  ++S Y ++   ++++KL   M+  
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G  P+  T    L +   +G  +  K VH   LKT   +D  V  GL+ +Y++      A
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            +VF+ +P+ D+V W+ MIA    N    EA   F +MR+  + P +F+ +++L+ CA  
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG 361

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
             S  G Q+H  + K G+  DI+V +ALI++Y KC  +  A + F  +  KN V+WN +I
Sbjct: 362 KCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVI 421

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GY   G G +A  ++++ + + V   ++TF + L AC+    +D+GV++ + + +    
Sbjct: 422 VGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQV-HGLAIKTNN 480

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
              +     +ID   + G    A+ + +EM    D   W  L+S    H   R A R
Sbjct: 481 AKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISGYSTHGLGRQALR 536



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/597 (23%), Positives = 260/597 (43%), Gaps = 58/597 (9%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+++ N +L+A  K+   + A  LFDEMPERN VS+  L          +  + +Y+++ 
Sbjct: 83  DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLH 138

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            EG         S  K   +L   E     H  ++K+G D N +V  AL++ Y+ CG   
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VFE +   + V +  ++S   +     ++L++   M       ++ +  + L   A
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALK--A 256

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G G            F++ VHGQ      +K  +  D  +   LL +Y + GDM  A 
Sbjct: 257 SIGLGAFD---------FAKGVHGQ-----ILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---- 348
            +F+ +P+  VV W+ MIA + Q     +A++L  RM+     P+E T  ++L  C    
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362

Query: 349 ------------VRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLS 377
                       V+ G                    + T  ++F  + S +  SWN ++ 
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y       +A  +FRE     V     T +  L +CA++  ++ G QVH  ++KT +  
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
              V++ LI +Y+KC   + A+ VF+ +  +D+  WN++I+G S + L  +A      M+
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK 542

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDI 556
             +  P   +F  VLS C+      QG++    + +D  +       + ++ +  + G +
Sbjct: 543 DRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQL 602

Query: 557 YGARQFFD-MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
             A +  + + +  + + W  M+   + N   +E  R   + I      D+ T+V +
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAMLSA-SMNQNNEEFARRSAEEILKINPKDEATYVLV 658



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 128/509 (25%), Positives = 228/509 (44%), Gaps = 88/509 (17%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH+ I++ G   + F+   LI  YS C +  SA+ +F+ +  KDI               
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDI--------------- 212

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                           V W  ++S  V NG  E +L + + M   GF+P + T  +  KA
Sbjct: 213 ----------------VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
           S  L   +  +  HG ++K     +  V   LL LY + G    A  VF EM + + V +
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           + M++   +     EA+++F  M    V  +  +LSS+L  CA   C             
Sbjct: 317 SFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC------------- 363

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
              +  G+Q+H L +K+GF+ D+++SN+L+D+YAK   MD+A  +F+ L  ++ VSWN +
Sbjct: 364 ---SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------- 348
           I GY    +  KA  + +          EVT  + L AC                     
Sbjct: 421 IVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN 480

Query: 349 --------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + GDIK  + +F+ M +  V+SWNA++S YS     ++A+++   
Sbjct: 481 AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDI 540

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK---TASHIDNYVASGLIGIYSK 451
           M+ R  KP+  T   +LS C+  G+++ G++   + ++       +++Y    ++ +  +
Sbjct: 541 MKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC--MVRLLGR 598

Query: 452 CQRNELAERVFHRIP-ELDIVCWNSMIAG 479
             + + A ++   IP E  ++ W +M++ 
Sbjct: 599 SGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 132/307 (42%), Gaps = 47/307 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  +++ G   D ++ N LI++Y+KC    +A  LF ++  K+  SWN +      
Sbjct: 367 GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV------ 420

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             +V + NL       G   KA S++ +        T +T +S 
Sbjct: 421 ------------------IVGYENL-------GEGGKAFSMFREALRNQVSVTEVTFSSA 455

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A  +L  ++ G + HGL IK    K + V+N+L+ +YAKCG  K A  VF EM   + 
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDV 515

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++ A++SG +      +AL +  +M  +    + ++   VL  C+  G      +  Q 
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAG------LIDQG 569

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVS 305
              F   +            G E  L     ++ +  ++G +D A  +   +P E SV+ 
Sbjct: 570 QECFESMIRDH---------GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620

Query: 306 WNVMIAG 312
           W  M++ 
Sbjct: 621 WRAMLSA 627



 Score = 42.4 bits (98), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 103/264 (39%), Gaps = 49/264 (18%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++  +L  C + +     + +H  I K G   D+F  + L+  Y K G    A   FD M
Sbjct: 51  AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT---------ACS 617
             +N V++  +  GYA      + + LY  +   G + +   F + L           C 
Sbjct: 111 PERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICP 166

Query: 618 --HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
             HS +V +G   ++S                +I+     G    A  + + + CK D V
Sbjct: 167 WLHSPIVKLG---YDSNAFVGAA---------LINAYSVCGSVDSARTVFEGILCK-DIV 213

Query: 676 IWEVLLS----------SCRLHANVRLAKRAAEELFRLDPKN-SAPYSLLANIYSSLGRW 724
           +W  ++S          S +L + +R+A           P N +   +L A+I   LG +
Sbjct: 214 VWAGIVSCYVENGYFEDSLKLLSCMRMAG--------FMPNNYTFDTALKASI--GLGAF 263

Query: 725 DDLRAVRELMSENCIVKDPAYSLG 748
           D  + V   + + C V DP   +G
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVG 287


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 177/527 (33%), Positives = 281/527 (53%), Gaps = 38/527 (7%)

Query: 258 QVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           Q+H   ++LG    D   S +L+  Y + G +  A   F  +  R V +WN M++G  + 
Sbjct: 89  QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRN 148

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD-----------IKTG-------- 357
            ++ +A+ L  RM   G   D VT  ++L  CV  GD           +K G        
Sbjct: 149 ARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVC 208

Query: 358 ----------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                           R++FD M S  + +WN+++S + Q      A+++F  M+  GV 
Sbjct: 209 NAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVS 268

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAER 460
           PD  TL  + S+ A  G +  G+ VH   ++    + + +A + ++ +Y+K  + E A+R
Sbjct: 269 PDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQR 328

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLS 519
           +F  +P  D V WN++I G   N L  EA   +  M+++E + P Q +F +VL + + L 
Sbjct: 329 MFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLG 388

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +  QG ++HA   K G   D++VG+ +I++Y KCG +  A   F+    ++T  WN +I 
Sbjct: 389 ALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVIS 448

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G   +G+G +A+ L+  M   G+ PD +TFV++L ACSH+GLVD G   FN MQ  +G++
Sbjct: 449 GVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIK 508

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           PI  HY CM+D  GRAG   +A   I  MP K D  IW  LL +CR+H NV + K A++ 
Sbjct: 509 PIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQN 568

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LF LDPKN   Y L++N+Y+ +G+WD +  VR L+    + K P +S
Sbjct: 569 LFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWS 615



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 199/411 (48%), Gaps = 57/411 (13%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D ++  A++ A  +   +  AY+ FDEM  R+V +WN ++S L RN    +A+ ++ +M 
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            EG     +T++SV      L D       H   +K GLD  ++V NA++ +Y K G  +
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
               VF+ MS  + VT+ +++SG  +  +V  A+EMF  M    VS D ++L S+    A
Sbjct: 223 EVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIA 282

Query: 233 REG--CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE-ADLHLSNSLLDMYAKNGDMD 289
           + G  CG                  G+ VHC  ++ G++  D+   N+++DMYAK   ++
Sbjct: 283 QCGDICG------------------GRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIE 324

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVAC 348
           +A+ +F ++P R  VSWN +I GY Q   +++AI +   M K  G +P + T +++L A 
Sbjct: 325 AAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAY 384

Query: 349 VRSGDIKTGREM-----------------------------------FDSMPSPSVSSWN 373
              G ++ G  M                                   F+  P  S   WN
Sbjct: 385 SHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWN 444

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           A++S      +  +A+ LF +MQ  G+ PD  T   +L++C+  G+++ G+
Sbjct: 445 AVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGR 495



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 192/421 (45%), Gaps = 55/421 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H + +++GL D+ F+CN +I++Y K                                  
Sbjct: 192 MHLYAVKHGLDDELFVCNAMIDVYGKLGM------------------------------- 220

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           LE   K+FD M  R++V+WN++IS   + G    A+ ++  M + G  P  +TL S+  A
Sbjct: 221 LEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASA 280

Query: 130 STALLDVEHGRRCHGLVIKIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
                D+  GR  H  +++ G D  +I   NA++ +YAK    + A  +F+ M   + V+
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVS 340

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           +  +++G  +     EA+ ++  M +K   +  +  + V  + A    G           
Sbjct: 341 WNTLITGYMQNGLASEAIHVYDHM-QKHEGLKPIQGTFVSVLPAYSHLGALQ-------- 391

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                  G ++H L+IK G   D+++   ++D+YAK G +D A ++F   P RS   WN 
Sbjct: 392 ------QGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNA 445

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-- 366
           +I+G G      KA+ L  +M+  G  PD VT +++L AC  +G +  GR  F+ M +  
Sbjct: 446 VISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAY 505

Query: 367 ---PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
              P    +  M+  + ++    +A    R M    +KPD      +L +C   G +E G
Sbjct: 506 GIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMP---IKPDSAIWGALLGACRIHGNVEMG 562

Query: 424 K 424
           K
Sbjct: 563 K 563



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 7/283 (2%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG-LIGIYSKCQRNELAERV 461
           D  T   +L +    G   +  Q+HA +L+      +  ASG L+  Y +  R   A R 
Sbjct: 70  DAFTFPPLLRAAQGPG---TAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F  +   D+  WN+M++GL  N+   EA   F +M    +     + ++VL  C  L   
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
                +H    K G  +++FV +A+I++Y K G +   R+ FD M  ++ VTWN +I G+
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM-QLDHGVEP 640
            Q G    AV ++  M  SGV PD +T +++ +A +  G +  G  +   M +    V  
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           I+     ++D   +      A+ + D MP + D V W  L++ 
Sbjct: 307 IIAG-NAIVDMYAKLSKIEAAQRMFDSMPVR-DAVSWNTLITG 347



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 31/134 (23%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA  ++ GL  D ++   +I+LY+KC     A  LF++ P +    WNA+      
Sbjct: 393 GTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAV------ 446

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    IS +  +G   KALS++++M  EG  P H+T  S+
Sbjct: 447 -------------------------ISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSL 481

Query: 127 FKASTALLDVEHGR 140
             A +    V+ GR
Sbjct: 482 LAACSHAGLVDQGR 495


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 192/575 (33%), Positives = 294/575 (51%), Gaps = 61/575 (10%)

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           A  VF+++S P+   +T M++G A+  R   AL++F  M  K    D VS +S++     
Sbjct: 30  ARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVK----DVVSWNSMI----- 80

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
           +GC                               F+                 D+  A  
Sbjct: 81  KGC-------------------------------FDC---------------ADLTMARK 94

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +F  +PERSVVSW  MI G+ Q  +   A  L  +M       D     +M+     +G 
Sbjct: 95  LFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPF----RDIAAWNSMIYGYCCNGR 150

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV--KPDRTTLAIIL 411
           ++ G  +F  MP  +V SW +M+    Q    +EA+ LFR+M   GV  KP  +T   ++
Sbjct: 151 VEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVI 210

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
           ++CA    L  G Q+HA   K     D Y+++ LI  Y+ C++ E + RVFH    +++V
Sbjct: 211 TACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVV 270

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
            W +++ G  LN    +A   F +M +  + P Q SF + L+SC  L +   GR++H   
Sbjct: 271 IWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAA 330

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
            K G   D+FVG++LI MY +CG++      F  +  KN V+WN +I G AQ+G G  A+
Sbjct: 331 VKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWAL 390

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
             +  M+ S V+PD+ITF  +L+ACSHSG+   G  +F     +   E  LDHY CM+D 
Sbjct: 391 AFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDI 450

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           LGR+G   EAE LI  MP K + ++W VLLS+C +H+ + +A+RAA+ +  L+P  S+ Y
Sbjct: 451 LGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAY 510

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LL+N+Y+S  RW D+  +R  M +  I K P  S
Sbjct: 511 VLLSNLYASASRWSDVSRIRREMKQRGITKQPGRS 545



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 213/438 (48%), Gaps = 29/438 (6%)

Query: 42  AQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLE 101
           A+ LF KMP +DI +WN+++   C +  +E   +LF EMP RNV+SW ++I  L ++G  
Sbjct: 123 AEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRS 182

Query: 102 EKALSVYNKMSNEGF--VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVAN 159
           E+AL ++ +M   G    PT  T   V  A      +  G + H  V K+G   + Y++ 
Sbjct: 183 EEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISA 242

Query: 160 ALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           AL++ YA C   + ++ VF      N V +TA+++G     +  +AL++F  M+R+ V  
Sbjct: 243 ALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLP 302

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           +  S +S L  C    CG+E+  +            G+++H   +KLG E D+ + NSL+
Sbjct: 303 NQSSFTSALNSC----CGLEALDW------------GREIHTAAVKLGLETDVFVGNSLI 346

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
            MY + G+++   VIF  + ++++VSWN +I G  Q      A+    +M     EPDE+
Sbjct: 347 VMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEI 406

Query: 340 TSINMLVACVRSGDIKTGREMF-----DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           T   +L AC  SG  + GR +F     +      +  +  M+    +S   +EA +L R 
Sbjct: 407 TFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRN 466

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN-YVASGLIGIYSKCQ 453
           M    VK +     ++LS+C     LE  ++     +    H  + YV   L  +Y+   
Sbjct: 467 MP---VKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVL--LSNLYASAS 521

Query: 454 RNELAERVFHRIPELDIV 471
           R     R+   + +  I 
Sbjct: 522 RWSDVSRIRREMKQRGIT 539



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 213/504 (42%), Gaps = 94/504 (18%)

Query: 20  FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDE 79
           F D +L   +I  Y++      A  LF +MP KD+ SWN+++       DL  A KLFDE
Sbjct: 39  FPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDE 98

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           MPER+VVSW  +I+  ++ G  E A  ++ KM               F+   A   + +G
Sbjct: 99  MPERSVVSWTTMINGFLQFGKIEVAEGLFYKMP--------------FRDIAAWNSMIYG 144

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
             C+G V                         +  + +F+EM   N +++T+M+ GL + 
Sbjct: 145 YCCNGRV-------------------------EDGLRLFQEMPCRNVISWTSMIGGLDQH 179

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
            R  EAL +FR M+   V +   S +     C    C   S ++            G Q+
Sbjct: 180 GRSEEALGLFRQMMGCGVEVKPTSSTY---CCVITACANASALY-----------QGVQI 225

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H    KLG+  D ++S +L+  YA    M+ +  +F      +VV W  ++ GYG   + 
Sbjct: 226 HAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKH 285

Query: 320 TKAIELLQRM----------------KSC-------------------GFEPDEVTSINM 344
             A+++   M                 SC                   G E D     ++
Sbjct: 286 EDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSL 345

Query: 345 LVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
           +V   R G++  G  +F  +   ++ SWN+++   +Q      A+  F +M    V+PD 
Sbjct: 346 IVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDE 405

Query: 405 TTLAIILSSCAAMGILESGK---QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            T   +LS+C+  G+ + G+   +  + +      +D+Y    ++ I  +  + E AE +
Sbjct: 406 ITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYAC--MVDILGRSGKLEEAEEL 463

Query: 462 FHRIP-ELDIVCWNSMIAGLSLNS 484
              +P + + + W  +++  +++S
Sbjct: 464 IRNMPVKANSMVWLVLLSACTMHS 487



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/407 (21%), Positives = 169/407 (41%), Gaps = 83/407 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HAH+ + G   D ++   LI  Y+ C     +  +F    H               
Sbjct: 222 GVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHM-------------- 267

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                            NVV W  L++    N   E AL V+ +M  EG +P   +  S 
Sbjct: 268 -----------------NVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSA 310

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             +   L  ++ GR  H   +K+GL+ +++V N+L+ +Y +CG     V +F+ +S+ N 
Sbjct: 311 LNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNI 370

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +++ G A+    + AL  F  M+R  V  D ++ + +L  C+  G   +     + 
Sbjct: 371 VSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFK- 429

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVS 305
              FS N   +      +KL   A       ++D+  ++G ++ AE +  N+P ++  + 
Sbjct: 430 --YFSENKSAE------VKLDHYA------CMVDILGRSGKLEEAEELIRNMPVKANSMV 475

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W V+++      +    +E+ +R   C  + +                            
Sbjct: 476 WLVLLSACTMHSK----LEVAERAAKCIIDLE---------------------------- 503

Query: 366 SPSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGV--KPDRTTLAI 409
            P  SS   +LS+ Y+ +    +  ++ REM+ RG+  +P R+ + I
Sbjct: 504 -PHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITI 549


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 188/642 (29%), Positives = 329/642 (51%), Gaps = 61/642 (9%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H  ++K G   +++  N LL+ Y K G+ K A+ +F+EM E N V++  +  G A  D  
Sbjct: 72  HCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYACQD-- 129

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ---QV 259
                              V L S L    REG  +   VF      F      +    +
Sbjct: 130 ------------------PVGLYSRL---HREGHELNPHVFTSFLKLFVSLDKAEICWWL 168

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H   +KLG++++  +  +L++ Y+  G +DSA  +F  +  + +V W  +++ Y +    
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCF 228

Query: 320 TKAIELLQRMKSCGFEPDEVT-----------------------------------SINM 344
             +++LL RM   GF P+  T                                    + +
Sbjct: 229 EDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGL 288

Query: 345 LVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
           L    + GD+    ++F+ MP   V  W+ M++ + Q+    +A+ +F  M+   V P+ 
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNE 348

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
            TL+ IL+ CA       G+Q+H   +K    +D YV++ LI +Y+KC++ + A ++F  
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAE 408

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           +   ++V WN++I G        +A   F++  +N++  T+ +F++ L +CA L+S   G
Sbjct: 409 LSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELG 468

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
            QVH    K      + V ++LI+MY KCGDI  A+  F+ M   +  +WN +I GY+ +
Sbjct: 469 VQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTH 528

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G G +A+R++  M  S  KP+ +TF+ +L+ CS++GL+D G + F SM  DHG+EP L+H
Sbjct: 529 GLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEH 588

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           YTCM+   GR+G   +A  LI+ +P +   +IW  +LS+     N   A+R+AEE+ +++
Sbjct: 589 YTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKIN 648

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           PK+ A Y LL+N+Y+   +W ++ ++R+ M E  + K+P  S
Sbjct: 649 PKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLS 690



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/597 (24%), Positives = 266/597 (44%), Gaps = 58/597 (9%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+++ N +L+A  K+   + A  LFDEMPERN VS+  L          +  + +Y+++ 
Sbjct: 83  DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYAC----QDPVGLYSRLH 138

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            EG         S  K   +L   E     H  ++K+G D N +V  AL++ Y+ CG   
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VFE +   + V +  ++S   +     ++L++   M       ++ +  + L   A
Sbjct: 199 SARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALK--A 256

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G G            F+++VHGQ      +K  +E D  +   LL +Y + GDM  A 
Sbjct: 257 SIGLGAF---------HFAKSVHGQ-----ILKTCYELDPRVGVGLLQLYTQLGDMSDAF 302

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---- 348
            +F+ +P+  VV W+ MIA + Q     KA+++  RM+     P+E T  ++L  C    
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGK 362

Query: 349 ------------VRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLS 377
                       V+ G                    + T  ++F  + S +V SWN ++ 
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIV 422

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
            Y       +A+ +FRE     V     T +  L +CA++  +E G QVH  ++KT +  
Sbjct: 423 GYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAK 482

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
              V++ LI +Y+KC   ++A+ VF+ +  +D+  WN++I+G S + L  +A   F  M+
Sbjct: 483 RVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMK 542

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDI 556
            ++  P   +F  VLS C+      QG+     +  D  +       + ++ ++ + G +
Sbjct: 543 GSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQL 602

Query: 557 YGARQFFD-MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
             A    + + +  + + W  M+   + N Y +E  R   + I      D+ T+V +
Sbjct: 603 DKAMNLIEGIPYEPSVMIWRAMLSA-SMNQYNEEFARRSAEEILKINPKDEATYVLL 658



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 221/474 (46%), Gaps = 33/474 (6%)

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
           +V  + +HC  +K G   DL  +N LL+ Y K G    A  +F  +PER+ VS+  +  G
Sbjct: 65  SVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQG 124

Query: 313 YG------------------QKYQSTKAIEL---LQRMKSC----------GFEPDEVTS 341
           Y                     +  T  ++L   L + + C          G++ +    
Sbjct: 125 YACQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVG 184

Query: 342 INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
             ++ A    G + + R +F+ +    +  W  ++S Y ++   +++++L   M   G  
Sbjct: 185 AALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFM 244

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P+  T    L +   +G     K VH   LKT   +D  V  GL+ +Y++      A +V
Sbjct: 245 PNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKV 304

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F+ +P+ D+V W+ MIA    N    +A   F +MR+  + P +F+ +++L+ CA    S
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCS 364

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G Q+H  + K G+  D++V +ALI++Y KC  +  A + F  +  KN V+WN +I GY
Sbjct: 365 GLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGY 424

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
              G G +A+ ++++ + + V   ++TF + L AC+    +++GV++ + + +       
Sbjct: 425 ENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQV-HGLAIKTNNAKR 483

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           +     +ID   + G    A+ + +EM    D   W  L+S    H   R A R
Sbjct: 484 VAVSNSLIDMYAKCGDIKVAQTVFNEME-TIDVASWNALISGYSTHGLGRQALR 536



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 235/518 (45%), Gaps = 89/518 (17%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH+ I++ G   + F+   LI  YS C +  SA+ +F+ +  KDI               
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDI--------------- 212

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                           V W  ++S  V NG  E +L + ++M  +GF+P + T  +  KA
Sbjct: 213 ----------------VVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKA 256

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
           S  L      +  HG ++K   + +  V   LL LY + G    A  VF EM + + V +
Sbjct: 257 SIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           + M++   +     +A+++F  M    V  +  +LSS+L  CA   C             
Sbjct: 317 SFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKC------------- 363

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
              +  G+Q+H L +K+GF+ D+++SN+L+D+YAK   MD+A  +F+ L  ++VVSWN +
Sbjct: 364 ---SGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTV 420

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------- 348
           I GY    +  KA+ + +          EVT  + L AC                     
Sbjct: 421 IVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNN 480

Query: 349 --------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + GDIK  + +F+ M +  V+SWNA++S YS     ++A+++F  
Sbjct: 481 AKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDI 540

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL---KTASHIDNYVASGLIGIYSK 451
           M+    KP+  T   +LS C+  G+++ G+    + +        +++Y    ++ ++ +
Sbjct: 541 MKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTC--MVRLFGR 598

Query: 452 CQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIE 488
             + + A  +   IP E  ++ W +M++  S+N  + E
Sbjct: 599 SGQLDKAMNLIEGIPYEPSVMIWRAMLSA-SMNQYNEE 635



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 36/295 (12%)

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D      +L  C       S K +H   LK  S +D +  + L+  Y K   ++ A  +F
Sbjct: 48  DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQF-SFATVLSSCAKLSS 520
             +PE + V + ++  G +         ++ +  R+ +E+ P  F SF  +  S  K   
Sbjct: 108 DEMPERNNVSYVTLTQGYACQD---PVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEI 164

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
            +    +H+ I K GY ++ FVG+ALI  Y  CG +  AR  F+ +  K+ V W  ++  
Sbjct: 165 CW---WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSC 221

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG--- 637
           Y +NG  +++++L   M   G  P++ TF   L A        +G+  F+  +  HG   
Sbjct: 222 YVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKA-------SIGLGAFHFAKSVHGQIL 274

Query: 638 -----VEP-----ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
                ++P     +L  YT       + G   +A  + +EMP K+D V W  +++
Sbjct: 275 KTCYELDPRVGVGLLQLYT-------QLGDMSDAFKVFNEMP-KNDVVPWSFMIA 321


>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
          Length = 667

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 172/506 (33%), Positives = 272/506 (53%), Gaps = 35/506 (6%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N++L  Y K G +  A  +F    +R   SWN++++G  + ++  + +    +M+     
Sbjct: 85  NTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVR 144

Query: 336 PDEVT-------------------------------SINMLVACVRSGDIKTGREMFDSM 364
           PD  T                                 N+L      G+I   R++FD M
Sbjct: 145 PDNFTYAIIIPCCDLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGM 204

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           PS  + +WNAM+S YS+     ++I LFR++   G+  D  T AI+L+  AA   +    
Sbjct: 205 PSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAM 264

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
           QVH+  ++     D +  + L+ +YSKC     A R+F  IP+ D+V W  +I G   + 
Sbjct: 265 QVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSG 324

Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN-DIFVG 543
              EA   F QM+  ++ P  F+F  +L +CA  ++  +GR  H  + K G +  D+ VG
Sbjct: 325 HMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVG 384

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI---AS 600
           SA+++MY KCG++  A + F  M  ++  +WN +I GYAQNG G +A++LY +M+    S
Sbjct: 385 SAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPS 444

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G+ P+++TFV +L ACSH+GL+  G   F  M   H ++P  +HYTCM+D LGRAG   E
Sbjct: 445 GIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQE 504

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           AE LI  +P K D V+W  LL +C+LH +V++ +R AE L+  +P+NS+ Y LLAN Y+ 
Sbjct: 505 AEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTD 564

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
           +G W +   +RE+M    + K    S
Sbjct: 565 IGEWGEAVEIREVMEARGVEKTAGCS 590



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 210/454 (46%), Gaps = 59/454 (12%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           +LHA +++NGL    + CN L++ Y        A  L   MP   + S+N ILS   K  
Sbjct: 36  VLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFG 95

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
            +  A KLFD   +R+  SWN ++S  V+N    + L+ + KM      P + T A +  
Sbjct: 96  LVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIP 155

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
                 D+  G++ H  ++K+  D + ++   LL +YA+ G    A  VF+ M     VT
Sbjct: 156 CC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVT 211

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           + AM+S  +K  R  +++ +FR + R+ +S D  + + VL            + FA    
Sbjct: 212 WNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVL------------NEFAARWQ 259

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
            F       QVH L I+ GF +D   +N+L+++Y+K G + SA  +F  +P++ VVSW V
Sbjct: 260 VFE----AMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTV 315

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-------- 360
           +I G+ Q     +A+ L  +M+    EP+  T   +L AC  +   + GR          
Sbjct: 316 IIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFG 375

Query: 361 ----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                       F  MP   ++SWN ++  Y+Q+    +A+KL+
Sbjct: 376 LLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLY 435

Query: 393 REMQF---RGVKPDRTTLAIILSSCAAMGILESG 423
            EM      G+ P+  T   +L +C+  G+L+ G
Sbjct: 436 NEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEG 469



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 184/374 (49%), Gaps = 35/374 (9%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A K+FD MP R +V+WN +IS   + G  +K++ ++ ++  EG      T A V     A
Sbjct: 197 ARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAA 256

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
              V    + H L+I+ G   + +  NAL++LY+KCG+   A  +FEE+ + + V++T +
Sbjct: 257 RWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVI 316

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           + G  ++  + EA+ +F  M    +  +S +   +LG CA               N F +
Sbjct: 317 IVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACA-------------DANAFQK 363

Query: 253 NVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
              G+  H L +K G   AD+ + ++++DMY+K G+M  A   F  +PER + SWN +I 
Sbjct: 364 ---GRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIIC 420

Query: 312 GYGQKYQSTKAIELLQRM---KSCGFEPDEVTSINMLVACVRSGDIKTG----REMFDS- 363
           GY Q     KA++L   M      G  P+EVT + +L AC  +G +K G    +EM D  
Sbjct: 421 GYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKH 480

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +  P+   +  M+    ++   +EA  L   +    +KPD      +L +C   G ++  
Sbjct: 481 LIKPTAEHYTCMVDLLGRAGLLQEAEALILALP---IKPDNVMWGALLGACKLHGDVQMT 537

Query: 424 KQVHAASLKTASHI 437
           +       +TA H+
Sbjct: 538 R-------RTAEHL 544


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 190/590 (32%), Positives = 309/590 (52%), Gaps = 48/590 (8%)

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
           A+ ++S+Y        A+ +F+ +  P  + + +++          +AL  F  M     
Sbjct: 42  ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
             D     SVL  C               D +F  +VHG       ++LG + DL+  N+
Sbjct: 102 CPDHNVFPSVLKSCT-----------MMMDLRFGESVHG-----FIVRLGMDCDLYTGNA 145

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI-ELLQRMKSCGFEP 336
           L++MYAK                         + G G K        E+ QR  + G E 
Sbjct: 146 LMNMYAK-------------------------LLGMGSKISVGNVFDEMPQRTSNSGDED 180

Query: 337 DEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
            +  +      C+    I + R +F+ MP   V S+N +++ Y+QS  +++A+++ REM 
Sbjct: 181 VKAET------CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG 234

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
              +KPD  TL+ +L   +    +  GK++H   ++     D Y+ S L+ +Y+K  R E
Sbjct: 235 TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 294

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
            +ERVF R+   D + WNS++AG   N    EA   F+QM   ++ P   +F++V+ +CA
Sbjct: 295 DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACA 354

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
            L++   G+Q+H  + + G+ ++IF+ SAL++MY KCG+I  AR+ FD M+  + V+W  
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTA 414

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDH 636
           +I G+A +G+G EAV L+++M   GVKP+ + FVA+LTACSH GLVD     FNSM   +
Sbjct: 415 IIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY 474

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA 696
           G+   L+HY  + D LGRAG   EA   I +M  +    +W  LLSSC +H N+ LA++ 
Sbjct: 475 GLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV 534

Query: 697 AEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           AE++F +D +N   Y L+ N+Y+S GRW ++  +R  M +  + K PA S
Sbjct: 535 AEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACS 584



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 219/433 (50%), Gaps = 35/433 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKC---NNTHSAQHLFDKMPHKDIYSWNAILSA 63
           G+ +H  I+R G+  D +  N L+ +Y+K     +  S  ++FD+MP +   S +  + A
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183

Query: 64  QC--KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +       ++   ++F+ MP ++VVS+N +I+   ++G+ E AL +  +M      P   
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           TL+SV    +  +DV  G+  HG VI+ G+D ++Y+ ++L+ +YAK    + +  VF  +
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              + +++ ++++G  +  R  EAL +FR M+   V   +V+ SSV+  CA         
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA------ 357

Query: 242 VFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                       +H G+Q+H   ++ GF +++ ++++L+DMY+K G++ +A  IF  +  
Sbjct: 358 -----------TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV 406

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
              VSW  +I G+       +A+ L + MK  G +P++V  + +L AC   G +      
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY 466

Query: 361 FDSMPSPSVSSWNAMLSSYS-------QSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           F+SM    V   N  L  Y+       ++   +EA     +M    V+P  +  + +LSS
Sbjct: 467 FNSM--TKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM---CVEPTGSVWSTLLSS 521

Query: 414 CAAMGILESGKQV 426
           C+    LE  ++V
Sbjct: 522 CSVHKNLELAEKV 534



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 195/416 (46%), Gaps = 87/416 (20%)

Query: 77  FDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDV 136
           F  +    V++W ++I       L  KAL+ + +M   G  P H    SV K+ T ++D+
Sbjct: 62  FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121

Query: 137 EHGRRCHGLVIKIGLDKNIYVANALLSLYAK---------CGWTKHAVP----------- 176
             G   HG ++++G+D ++Y  NAL+++YAK          G     +P           
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181

Query: 177 ----------------VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
                           VFE M   + V++  +++G A++    +AL M R M    +  D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
           S +LSSVL             +F++    +   + G+++H   I+ G ++D+++ +SL+D
Sbjct: 242 SFTLSSVL------------PIFSE----YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVD 285

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MYAK+  ++ +E +FS L  R  +SWN ++AGY Q  +  +A+ L ++M +   +P  V 
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345

Query: 341 SINMLVACV-----------------------------------RSGDIKTGREMFDSMP 365
             +++ AC                                    + G+IK  R++FD M 
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                SW A++  ++   +  EA+ LF EM+ +GVKP++     +L++C+ +G+++
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 116/231 (50%), Gaps = 31/231 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GK +H +++R G+  D ++ + L+++Y+K      ++ +F ++  +D  SWN+     
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNS----- 313

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     L++  V+NG   +AL ++ +M      P  +  +
Sbjct: 314 --------------------------LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV  A   L  +  G++ HG V++ G   NI++A+AL+ +Y+KCG  K A  +F+ M+  
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           +EV++TA++ G A      EA+ +F  M R+ V  + V+  +VL  C+  G
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG 458


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 170/495 (34%), Positives = 271/495 (54%), Gaps = 35/495 (7%)

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           MD A  IF  + E    ++N+MI G+  K    +AI L + M     +PDE T   +L  
Sbjct: 74  MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133

Query: 348 CVR-----------------------------------SGDIKTGREMFDSMPSPSVSSW 372
           C R                                    G+++  R +FD M   +V +W
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTW 193

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           N+M + Y++S N +E +KLF EM    ++ D  TL  +L++C  +  LE G+ ++    +
Sbjct: 194 NSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEE 253

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                +  + + L+ +Y+KC + + A R+F ++   D+V W++MI+G S  S   EA   
Sbjct: 254 KGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDL 313

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           F +M++  + P + +  ++LSSCA L +   G+ VH  I+K      + +G+AL++ Y K
Sbjct: 314 FHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAK 373

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           CG +  + + F  M  KN ++W  +I G A NG G +A+  +  M+   V+P+D+TF+ +
Sbjct: 374 CGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGV 433

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L+ACSH+GLVD G ++F SM  D G+EP ++HY CM+D LGRAG   EA   I  MP + 
Sbjct: 434 LSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQP 493

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
           + VIW  LL+SC++H NV + + + ++L  L+P +S  Y LL+NIY+S+GRW+D   VR 
Sbjct: 494 NAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRG 553

Query: 733 LMSENCIVKDPAYSL 747
            M E  I K P  SL
Sbjct: 554 EMKEKGIKKTPGCSL 568



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 231/495 (46%), Gaps = 62/495 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA I++ G     F+ N LI +Y+ C                              
Sbjct: 143 GEQIHALIMKCGFGSHGFVKNTLIHMYANCG----------------------------- 173

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             ++E A ++FDEM ERNV +WN++ +   ++G  E+ + ++++M         +TL SV
Sbjct: 174 --EVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSV 231

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L D+E G   +  V + GL  N  +  +L+ +YAKCG    A  +F++M   + 
Sbjct: 232 LTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDV 291

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V ++AM+SG ++  R  EAL++F  M +  +  + +++ S+L  CA  G  +E+      
Sbjct: 292 VAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLG-ALET------ 344

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ VH    K   +  + L  +L+D YAK G ++S+  +F  +P ++V+SW
Sbjct: 345 ---------GKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSW 395

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
            V+I G     Q  KA+E    M     EP++VT I +L AC  +G +  GR++F SM  
Sbjct: 396 TVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSR 455

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +  M+    ++   +EA +  + M    ++P+      +L+SC     +E
Sbjct: 456 DFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMP---IQPNAVIWRTLLASCKVHKNVE 512

Query: 422 SGKQ-VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
            G++ +    +   +H  +Y+   L  IY+   R E A +V   + E  I        G 
Sbjct: 513 IGEESLKQLIILEPTHSGDYIL--LSNIYASVGRWEDALKVRGEMKEKGI----KKTPGC 566

Query: 481 SLNSLDIEAFMFFKQ 495
           SL  LD     FF +
Sbjct: 567 SLIELDGVIHEFFAE 581



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 209/451 (46%), Gaps = 63/451 (13%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           +++A  +F ++ E +  ++N +I          +A+ ++ +M      P   T   + K 
Sbjct: 74  MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
            + L  +  G + H L++K G   + +V N L+ +YA CG  + A  VF+EMSE N  T+
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTW 193

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            +M +G  K+    E +++F  M+   +  D V+L SVL  C R            +D +
Sbjct: 194 NSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGR-----------LADLE 242

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+ ++    + G + +  L  SL+DMYAK G +D+A  +F  +  R VV+W+ M
Sbjct: 243 L-----GEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAM 297

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----------- 358
           I+GY Q  +  +A++L   M+    +P+E+T +++L +C   G ++TG+           
Sbjct: 298 ISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRM 357

Query: 359 ------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                   E+F  MP  +V SW  ++   + +   K+A++ F  
Sbjct: 358 KLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYL 417

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA---SLKTASHIDNYVASGLIGIYSK 451
           M  + V+P+  T   +LS+C+  G+++ G+ +  +          I++Y    ++ I   
Sbjct: 418 MLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHY--GCMVDILG- 474

Query: 452 CQRNELAERVFHRIPELDI----VCWNSMIA 478
             R  L E  F  I  + I    V W +++A
Sbjct: 475 --RAGLIEEAFQFIKNMPIQPNAVIWRTLLA 503



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 165/325 (50%), Gaps = 13/325 (4%)

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL--AERVFHRI 465
            +IL  C  +  L    ++HA  +KT   +   VA  L+   +      +  A  +F +I
Sbjct: 28  TLILEQCKTIRDL---NEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQI 84

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
            E D   +N MI G +L     EA + FK+M +N + P +F+F  +L  C++L +  +G 
Sbjct: 85  DEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGE 144

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           Q+HA I K G+ +  FV + LI MY  CG++  AR+ FD M  +N  TWN M  GY ++G
Sbjct: 145 QIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSG 204

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
             +E V+L+ +M+   ++ D++T V++LTAC     +++G E  N    + G++      
Sbjct: 205 NWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELG-EWINRYVEEKGLKGNPTLI 263

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR--L 703
           T ++D   + G    A  L D+M  + D V W  ++S     +  R A     E+ +  +
Sbjct: 264 TSLVDMYAKCGQVDTARRLFDQMD-RRDVVAWSAMISGYSQASRCREALDLFHEMQKANI 322

Query: 704 DPKNSAPYSLLAN--IYSSL--GRW 724
           DP      S+L++  +  +L  G+W
Sbjct: 323 DPNEITMVSILSSCAVLGALETGKW 347


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 192/575 (33%), Positives = 294/575 (51%), Gaps = 61/575 (10%)

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           A  VF+++S P+   +T M++G A+  R   AL++F  M  K    D VS +S++     
Sbjct: 14  ARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVK----DVVSWNSMI----- 64

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
           +GC                               F+                 D+  A  
Sbjct: 65  KGC-------------------------------FDC---------------ADLTMARK 78

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +F  +PERSVVSW  MI G+ Q  +   A  L  +M       D     +M+     +G 
Sbjct: 79  LFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPF----RDIAAWNSMIYGYCCNGR 134

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV--KPDRTTLAIIL 411
           ++ G  +F  MP  +V SW +M+    Q    +EA+ LFR+M   GV  KP  +T   ++
Sbjct: 135 VEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVI 194

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
           ++CA    L  G Q+HA   K     D Y+++ LI  Y+ C++ E + RVFH    +++V
Sbjct: 195 TACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVV 254

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
            W +++ G  LN    +A   F +M +  + P Q SF + L+SC  L +   GR++H   
Sbjct: 255 IWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAA 314

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
            K G   D+FVG++LI MY +CG++      F  +  KN V+WN +I G AQ+G G  A+
Sbjct: 315 VKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWAL 374

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
             +  M+ S V+PD+ITF  +L+ACSHSG+   G  +F     +   E  LDHY CM+D 
Sbjct: 375 AFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDI 434

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           LGR+G   EAE LI  MP K + ++W VLLS+C +H+ + +A+RAA+ +  L+P  S+ Y
Sbjct: 435 LGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAY 494

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LL+N+Y+S  RW D+  +R  M +  I K P  S
Sbjct: 495 VLLSNLYASASRWSDVSRIRREMKQRGITKQPGRS 529



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 213/438 (48%), Gaps = 29/438 (6%)

Query: 42  AQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLE 101
           A+ LF KMP +DI +WN+++   C +  +E   +LF EMP RNV+SW ++I  L ++G  
Sbjct: 107 AEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRS 166

Query: 102 EKALSVYNKMSNEGF--VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVAN 159
           E+AL ++ +M   G    PT  T   V  A      +  G + H  V K+G   + Y++ 
Sbjct: 167 EEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISA 226

Query: 160 ALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           AL++ YA C   + ++ VF      N V +TA+++G     +  +AL++F  M+R+ V  
Sbjct: 227 ALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLP 286

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           +  S +S L  C    CG+E+  +            G+++H   +KLG E D+ + NSL+
Sbjct: 287 NQSSFTSALNSC----CGLEALDW------------GREIHTAAVKLGLETDVFVGNSLI 330

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
            MY + G+++   VIF  + ++++VSWN +I G  Q      A+    +M     EPDE+
Sbjct: 331 VMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEI 390

Query: 340 TSINMLVACVRSGDIKTGREMF-----DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           T   +L AC  SG  + GR +F     +      +  +  M+    +S   +EA +L R 
Sbjct: 391 TFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRN 450

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN-YVASGLIGIYSKCQ 453
           M    VK +     ++LS+C     LE  ++     +    H  + YV   L  +Y+   
Sbjct: 451 MP---VKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVL--LSNLYASAS 505

Query: 454 RNELAERVFHRIPELDIV 471
           R     R+   + +  I 
Sbjct: 506 RWSDVSRIRREMKQRGIT 523



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 184/410 (44%), Gaps = 53/410 (12%)

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           +N  +D A  +F  +    V  + +MI GY + Y+   A++L   M       D V+  +
Sbjct: 7   RNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV----KDVVSWNS 62

Query: 344 MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
           M+  C    D+   R++FD MP  SV SW  M++ + Q    + A  LF +M FR +   
Sbjct: 63  MIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAA- 121

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
                                          S I  Y  +G         R E   R+F 
Sbjct: 122 -----------------------------WNSMIYGYCCNG---------RVEDGLRLFQ 143

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN--EMYPTQFSFATVLSSCAKLSSS 521
            +P  +++ W SMI GL  +    EA   F+QM     E+ PT  ++  V+++CA  S+ 
Sbjct: 144 EMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASAL 203

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK---NTVTWNEMI 578
           +QG Q+HA + K GY  D ++ +ALI  Y  C  +  + + F   HGK   N V W  ++
Sbjct: 204 YQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF---HGKLHMNVVIWTALV 260

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GY  N   ++A++++ +M+  GV P+  +F + L +C     +D G EI ++  +  G+
Sbjct: 261 TGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREI-HTAAVKLGL 319

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           E  +     +I    R G+ ++  ++   +  K + V W  ++  C  H 
Sbjct: 320 ETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNSVIVGCAQHG 368



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 213/504 (42%), Gaps = 94/504 (18%)

Query: 20  FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDE 79
           F D +L   +I  Y++      A  LF +MP KD+ SWN+++       DL  A KLFDE
Sbjct: 23  FPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDE 82

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           MPER+VVSW  +I+  ++ G  E A  ++ KM               F+   A   + +G
Sbjct: 83  MPERSVVSWTTMINGFLQFGKIEVAEGLFYKMP--------------FRDIAAWNSMIYG 128

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
             C+G V                         +  + +F+EM   N +++T+M+ GL + 
Sbjct: 129 YCCNGRV-------------------------EDGLRLFQEMPCRNVISWTSMIGGLDQH 163

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
            R  EAL +FR M+   V +   S +     C    C   S ++            G Q+
Sbjct: 164 GRSEEALGLFRQMMGCGVEVKPTSSTY---CCVITACANASALY-----------QGVQI 209

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H    KLG+  D ++S +L+  YA    M+ +  +F      +VV W  ++ GYG   + 
Sbjct: 210 HAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKH 269

Query: 320 TKAIELLQRM----------------KSC-------------------GFEPDEVTSINM 344
             A+++   M                 SC                   G E D     ++
Sbjct: 270 EDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSL 329

Query: 345 LVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
           +V   R G++  G  +F  +   ++ SWN+++   +Q      A+  F +M    V+PD 
Sbjct: 330 IVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDE 389

Query: 405 TTLAIILSSCAAMGILESGK---QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            T   +LS+C+  G+ + G+   +  + +      +D+Y    ++ I  +  + E AE +
Sbjct: 390 ITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYAC--MVDILGRSGKLEEAEEL 447

Query: 462 FHRIP-ELDIVCWNSMIAGLSLNS 484
              +P + + + W  +++  +++S
Sbjct: 448 IRNMPVKANSMVWLVLLSACTMHS 471



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/407 (21%), Positives = 169/407 (41%), Gaps = 83/407 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HAH+ + G   D ++   LI  Y+ C     +  +F    H               
Sbjct: 206 GVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHM-------------- 251

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                            NVV W  L++    N   E AL V+ +M  EG +P   +  S 
Sbjct: 252 -----------------NVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSA 294

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             +   L  ++ GR  H   +K+GL+ +++V N+L+ +Y +CG     V +F+ +S+ N 
Sbjct: 295 LNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNI 354

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +++ G A+    + AL  F  M+R  V  D ++ + +L  C+  G   +     + 
Sbjct: 355 VSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFK- 413

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVS 305
              FS N   +      +KL   A       ++D+  ++G ++ AE +  N+P ++  + 
Sbjct: 414 --YFSENKSAE------VKLDHYA------CMVDILGRSGKLEEAEELIRNMPVKANSMV 459

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W V+++      +    +E+ +R   C  + +                            
Sbjct: 460 WLVLLSACTMHSK----LEVAERAAKCIIDLE---------------------------- 487

Query: 366 SPSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGV--KPDRTTLAI 409
            P  SS   +LS+ Y+ +    +  ++ REM+ RG+  +P R+ + I
Sbjct: 488 -PHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITI 533


>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 191/525 (36%), Positives = 282/525 (53%), Gaps = 38/525 (7%)

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           HCL IK G  A ++ +N+++  YAK G++  A  +F    +R  VSWN MIAG+      
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81

Query: 320 TKAIELLQRMKSCGFEPDEVTSINML--VACV-----------------RSGDIKTGR-- 358
             A+E L+ MK  GF  D  +  ++L  VACV                   G++  G   
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141

Query: 359 --------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
                         E+F S+   +  +WNA++S Y+Q  +   A  L   M+  GV+ D 
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
            T A +L+      + +   QVHA  +K     D  V + +I  YS+C   E AERVF  
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261

Query: 465 IPE---LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
             E   LD V WNS++ G S + L  +A  FF+ MR   +    ++F+ VL SC+ L++ 
Sbjct: 262 AIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATL 321

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G+QVH  + K G+  + FV S+LI MY KCG I  AR+ FD     +++ WN +I GY
Sbjct: 322 QLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGY 381

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           AQ+G G  A+ L+  M    VK D ITFVA+LTACSH GLV+ G     SM+ D+G+ P 
Sbjct: 382 AQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPR 441

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           ++HY CMID LGRAG   EA+ LI+ MP + D ++W+ LL +CR   ++ LA + A  L 
Sbjct: 442 MEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLL 501

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            L+P+    Y LL++++  L RW++  +++ LM E  + K P +S
Sbjct: 502 ELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWS 546



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 200/430 (46%), Gaps = 54/430 (12%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H L IK G   +IY AN ++S YAKCG  + A  +F E S+ + V++  M++G       
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
             ALE  + M R   ++D  S  S+L   A  G  VE                GQQVH +
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGY-VEV---------------GQQVHSM 125

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            +K+G+E ++   ++LLDMYAK   ++ A  +F ++  R+ V+WN +I+GY Q      A
Sbjct: 126 MVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTA 185

Query: 323 IELLQRMKSCGFEPDEVTSIN-----------------------------------MLVA 347
             LL  M+  G E D+ T                                      ++ A
Sbjct: 186 FWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITA 245

Query: 348 CVRSGDIKTGREMFD-SMPSPSVS--SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
               G I+    +FD ++ +  +   SWN++L+ +SQS   ++A+K F  M+ + V  D 
Sbjct: 246 YSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDH 305

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
              + +L SC+ +  L+ G+QVH   LK+    + +VAS LI +YSKC   E A + F  
Sbjct: 306 YAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDA 365

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
            P+   + WNS+I G + +     A   F  M+   +     +F  VL++C+ +    +G
Sbjct: 366 TPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEG 425

Query: 525 RQVHAQIEKD 534
                 +E D
Sbjct: 426 WSFLKSMESD 435



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 216/467 (46%), Gaps = 60/467 (12%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           IY+ N I+S   K  ++  A K+F E  +R+ VSWN +I+  V  G  E AL     M  
Sbjct: 34  IYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKR 93

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
            GF     +  S+ K    +  VE G++ H +++K+G + N++  +ALL +YAKC   + 
Sbjct: 94  YGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVED 153

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           A  VF+ ++  N VT+ A++SG A+      A  +   M  + V ID  + +        
Sbjct: 154 AFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAP------- 206

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
               + + +     +K +      QVH   +K G  +D  + N+++  Y++ G ++ AE 
Sbjct: 207 ----LLTLLDDPDLHKLT-----TQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAER 257

Query: 294 IFSNLPE-RSV--VSWNVMIAGYGQKYQSTKAIELLQRMKS------------------- 331
           +F    E R +  VSWN ++ G+ Q   S  A++  + M+S                   
Sbjct: 258 VFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSD 317

Query: 332 ----------------CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                            GFEP+   + +++    + G I+  R+ FD+ P  S  +WN++
Sbjct: 318 LATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSL 377

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAASLK 432
           +  Y+Q    K A+ LF  M+ R VK D  T   +L++C+ +G++E G    +   +   
Sbjct: 378 IFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYG 437

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
               +++Y    +I +  +  R + A+ +   +P E D + W +++ 
Sbjct: 438 IPPRMEHYAC--MIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLG 482



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 194/411 (47%), Gaps = 30/411 (7%)

Query: 48  KMPHK-DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALS 106
           KM ++ ++++ +A+L    K + +E A+++F  +  RN V+WN LIS   + G    A  
Sbjct: 128 KMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFW 187

Query: 107 VYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYA 166
           + + M  EG      T A +          +   + H  ++K GL  +  V NA+++ Y+
Sbjct: 188 LLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYS 247

Query: 167 KCGWTKHAVPVFE---EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +CG  + A  VF+   E  + + V++ ++++G +++    +AL+ F  M  + V ID  +
Sbjct: 248 ECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYA 307

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
            S+VL  C        SD+             GQQVH L +K GFE +  +++SL+ MY+
Sbjct: 308 FSAVLRSC--------SDLATLQ--------LGQQVHVLVLKSGFEPNGFVASSLIFMYS 351

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K G ++ A   F   P+ S ++WN +I GY Q  +   A++L   MK    + D +T + 
Sbjct: 352 KCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVA 411

Query: 344 MLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           +L AC   G ++ G     SM S     P +  +  M+    ++    EA  L   M F 
Sbjct: 412 VLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPF- 470

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQV--HAASLKTASHIDNYVASGLIG 447
             +PD      +L +C   G +E   QV  H   L+   H    + S + G
Sbjct: 471 --EPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFG 519



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 17/222 (7%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +L++G   + F+ + LI +YSKC     A+  FD  P     +WN+++    +
Sbjct: 324 GQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQ 383

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
               + A  LF  M +R V    +++  +++A    GL E+  S    M ++  +P  + 
Sbjct: 384 HGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRM- 442

Query: 123 LASVFKASTALLDV--EHGR--RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
                +    ++D+    GR      L+  +  + +  V   LL     CG  + A  V 
Sbjct: 443 -----EHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVA 497

Query: 179 EEM--SEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
             +   EP E  T+  + S      R  E   + RLM  + V
Sbjct: 498 SHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGV 539


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 180/530 (33%), Positives = 284/530 (53%), Gaps = 37/530 (6%)

Query: 255 HGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
            GQQ+H   I     E + +L+  L   YA  G M  AEVIF  +  ++   WN MI GY
Sbjct: 77  QGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGY 136

Query: 314 GQKYQSTKA-------------------------------IELLQRMKS----CGFEPDE 338
                  K+                               +E+ +R+ S    CG E D 
Sbjct: 137 ASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDI 196

Query: 339 VTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
               ++L    + GD+ T R +FD M    ++SWN M+S Y+++ +   A  +F  M   
Sbjct: 197 YVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKA 256

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNEL 457
           G+  D TTL  +LS+CA +  ++ GK +H  +++ +  + + +  + LI +Y  C     
Sbjct: 257 GLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVD 316

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A R+F R+   D V WNSMI G + N    E+   F++M  +   P Q +F  VL +C +
Sbjct: 317 ARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQ 376

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
           +++   G  +H+ + K G+  +  VG+AL++MY KCG +  +R+ FD M  K+ V+W+ M
Sbjct: 377 IAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAM 436

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           + GY  +G G EA+ +   M A+ V PD+  F +IL+ACSH+GLV  G EIF  M+ ++ 
Sbjct: 437 VAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYN 496

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
           V+P L HY+CM+D LGRAGH  EA ++I  M  K    IW  LL++ RLH N++LA+ +A
Sbjct: 497 VKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISA 556

Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           +++F ++PK  + Y  L+NIY++  RWDD+  VR ++    + K P  S 
Sbjct: 557 QKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSF 606



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 202/461 (43%), Gaps = 82/461 (17%)

Query: 2   KAHVAGKLLHAHILRNGLFDD-TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           K+   G+ LHAH++   + ++ T+L  +L   Y+ C     A+ +FD +  K        
Sbjct: 73  KSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK-------- 124

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
                                  N   WN +I     NGL  K+L +Y +M   G    +
Sbjct: 125 -----------------------NSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADN 161

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T   V KA   LL VE GRR H  V+  GL+ +IYV N+LL++YAK G    A  VF+ 
Sbjct: 162 FTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDR 221

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M+E +  ++  M+SG AK      A  +F LM +  +  D  +L  +L  CA        
Sbjct: 222 MAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACA-------- 273

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           D+ A  + K    +HG  V      +G   +   +NSL++MY     M  A  +F  +  
Sbjct: 274 DLKAVKEGKV---IHGYAVRN---SIG-NYNKFFTNSLIEMYCNCNCMVDARRLFERVRW 326

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------ 348
           +  VSWN MI GY +   + +++ L +RM   G  PD+VT I +L AC            
Sbjct: 327 KDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSI 386

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + G +   R +FD MP  S+ SW+AM++ Y      
Sbjct: 387 HSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRG 446

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           +EAI +   M+   V PD      ILS+C+  G++  GK++
Sbjct: 447 REAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEI 487



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 196/414 (47%), Gaps = 58/414 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+ ++  GL  D ++ N L+ +Y+K  +  +A+ +FD+M  +D+ SWN ++S   K
Sbjct: 180 GRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAK 239

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           + D   A+ +FD                                M   G      TL  +
Sbjct: 240 NADSGTAFLVFD-------------------------------LMGKAGLFADCTTLLGL 268

Query: 127 FKASTALLDVEHGRRCHGLVIK--IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
             A   L  V+ G+  HG  ++  IG + N +  N+L+ +Y  C     A  +FE +   
Sbjct: 269 LSACADLKAVKEGKVIHGYAVRNSIG-NYNKFFTNSLIEMYCNCNCMVDARRLFERVRWK 327

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ +M+ G A+     E+L +FR M       D V+  +VLG C             
Sbjct: 328 DTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGAC------------- 374

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
              ++ +   +G  +H   +K GF+A+  +  +L+DMY+K G +  +  +F  +P++S+V
Sbjct: 375 ---DQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLV 431

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SW+ M+AGYG   +  +AI +L  MK+    PD     ++L AC  +G +  G+E+F  M
Sbjct: 432 SWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKM 491

Query: 365 P-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
                  P++S ++ M+    ++ +  EA  + R M+   +KP     A +L++
Sbjct: 492 EKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTME---IKPTSDIWAALLTA 542



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 188/424 (44%), Gaps = 69/424 (16%)

Query: 2   KAHVAGKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           KA   GK++H + +RN + + + F  N LIE+Y  CN                       
Sbjct: 276 KAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCN----------------------- 312

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
               C  D    A +LF+ +  ++ VSWN++I    RNG   ++L ++ +M+ +G  P  
Sbjct: 313 ----CMVD----ARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQ 364

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           +T  +V  A   +  + +G   H  ++K G D N  V  AL+ +Y+KCG    +  VF+E
Sbjct: 365 VTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDE 424

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M + + V+++AM++G     R  EA+ +   M   +V  D+   +S+L  C+  G  VE 
Sbjct: 425 MPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEG 484

Query: 241 -DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
            ++F + + ++  NV     H               + ++D+  + G +D A VI   + 
Sbjct: 485 KEIFYKMEKEY--NVKPALSH--------------YSCMVDLLGRAGHLDEAYVIIRTME 528

Query: 300 ERSVVS-WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI----NMLVACVRSGDI 354
            +     W  ++    + +++ K  E +   K     P  V+S     N+  A  R  D+
Sbjct: 529 IKPTSDIWAALLTA-SRLHKNIKLAE-ISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDV 586

Query: 355 KTGREM-----FDSMPSPSVSSWNAML-------SSYSQSEN-HKEAIKLFREMQFRGVK 401
           +  R M         P  S    + M+        S+ Q+E+ + +  +L ++++  G K
Sbjct: 587 ERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYK 646

Query: 402 PDRT 405
           PD +
Sbjct: 647 PDTS 650


>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g39952, mitochondrial; Flags: Precursor
 gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 775

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 214/733 (29%), Positives = 358/733 (48%), Gaps = 52/733 (7%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           ++I+  + ++S+         + ++F  +  R++  WN++I A   NG   ++L  +  M
Sbjct: 57  ENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSM 116

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGW 170
              G  P H T   V  A   LL    G   HGLV+K  G D+N  V  + +  Y+KCG+
Sbjct: 117 LLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGF 176

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            + A  VF+EM + + V +TA++SG  +       L     M      +D  +  ++   
Sbjct: 177 LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTL--E 234

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           C  + C   S++ A  +        G+ +H   +K G  +   + +S+   Y+K+G+   
Sbjct: 235 CGFQAC---SNLGALKE--------GRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSE 283

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS---INML-- 345
           A + F  L +  + SW  +IA   +     ++ ++   M++ G  PD V     IN L  
Sbjct: 284 AYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGK 343

Query: 346 VACVRSGDIKTG---REMF--DSMPSPSVSS--------------------------WNA 374
           +  V  G    G   R  F  DS    S+ S                          WN 
Sbjct: 344 MMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNT 403

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           ML  Y + + H + I+LFR++Q  G++ D  +   ++SSC+ +G +  GK +H   +KT+
Sbjct: 404 MLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTS 463

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             +   V + LI +Y K     +A R+F    + +++ WN+MIA         +A   F 
Sbjct: 464 LDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFD 522

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           +M      P+  +  T+L +C    S  +G+ +H  I +  +  ++ + +ALI+MY KCG
Sbjct: 523 RMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCG 582

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
            +  +R+ FD  + K+ V WN MI GY  +G  + A+ L+  M  S VKP   TF+A+L+
Sbjct: 583 HLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 642

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           AC+H+GLV+ G ++F  M   + V+P L HY+C++D L R+G+  EAE  +  MP   D 
Sbjct: 643 ACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDG 701

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           VIW  LLSSC  H    +  R AE     DP+N   Y +LAN+YS+ G+W++    RE+M
Sbjct: 702 VIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMM 761

Query: 735 SENCIVKDPAYSL 747
            E+ + K   +S+
Sbjct: 762 RESGVGKRAGHSV 774



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 161/640 (25%), Positives = 288/640 (45%), Gaps = 89/640 (13%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G  +H  +L++G FD +T +    +  YSKC     A  +FD+MP +D+ +W AI+S   
Sbjct: 144 GTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGH- 202

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF---VPTHIT 122
                                         V+NG  E  L    KM + G     P   T
Sbjct: 203 ------------------------------VQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L   F+A + L  ++ GR  HG  +K GL  + +V +++ S Y+K G    A   F E+ 
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG 292

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           + +  ++T++++ LA++  + E+ +MF  M  K +  D V +S ++              
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI-------------- 338

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER- 301
                 K      G+  H   I+  F  D  + NSLL MY K   +  AE +F  + E  
Sbjct: 339 --NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEG 396

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--- 358
           +  +WN M+ GYG+     K IEL +++++ G E D  ++ +++ +C   G +  G+   
Sbjct: 397 NKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLH 456

Query: 359 -------------------EMFDSMPSPSVS------------SWNAMLSSYSQSENHKE 387
                              +++  M   +V+            +WNAM++SY   E  ++
Sbjct: 457 CYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEK 516

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           AI LF  M     KP   TL  +L +C   G LE G+ +H    +T   ++  +++ LI 
Sbjct: 517 AIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALID 576

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQF 506
           +Y+KC   E +  +F    + D VCWN MI+G  ++  D+E A   F QM ++++ PT  
Sbjct: 577 MYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHG-DVESAIALFDQMEESDVKPTGP 635

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ-FFDM 565
           +F  +LS+C       QG+++  ++ +     ++   S L+++  + G++  A      M
Sbjct: 636 TFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSM 695

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
               + V W  ++     +G  +  +R+ +  +AS  + D
Sbjct: 696 PFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQND 735



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 158/640 (24%), Positives = 290/640 (45%), Gaps = 65/640 (10%)

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
           S+  +V  HI++    ++    L +E  R+ + L+I  GL +NI+VA+ L+S YA  G  
Sbjct: 20  SSASYVDRHISVILCDQS----LSLESLRKHNALIITGGLSENIFVASKLISSYASYGKP 75

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             +  VF  ++  +   + +++           +L  F  M+    S D  +   V+  C
Sbjct: 76  NLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSAC 135

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL-GFEADLHLSNSLLDMYAKNGDMDS 290
           A      E   F            G  VH L +K  GF+ +  +  S +  Y+K G +  
Sbjct: 136 A------ELLWFHV----------GTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQD 179

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM---LVA 347
           A ++F  +P+R VV+W  +I+G+ Q  +S   +  L +M S G + D+     +     A
Sbjct: 180 ACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQA 239

Query: 348 CVRSGDIKTGREM-----------------------------------FDSMPSPSVSSW 372
           C   G +K GR +                                   F  +    + SW
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSW 299

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
            ++++S ++S + +E+  +F EMQ +G+ PD   ++ +++    M ++  GK  H   ++
Sbjct: 300 TSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIR 359

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFM 491
               +D+ V + L+ +Y K +   +AE++F RI E  +   WN+M+ G       ++   
Sbjct: 360 HCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIE 419

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            F++++   +     S  +V+SSC+ + +   G+ +H  + K      I V ++LI++Y 
Sbjct: 420 LFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYG 479

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           K GD+  A + F      N +TWN MI  Y      ++A+ L+  M++   KP  IT V 
Sbjct: 480 KMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVT 538

Query: 612 ILTACSHSGLVDVGVEIFNSM-QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
           +L AC ++G ++ G  I   + + +H  E  L     +ID   + GH  ++  L D    
Sbjct: 539 LLMACVNTGSLERGQMIHRYITETEH--EMNLSLSAALIDMYAKCGHLEKSRELFDAGNQ 596

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
           K D V W V++S   +H +V  A    +++   D K + P
Sbjct: 597 K-DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGP 635



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 83/401 (20%), Positives = 159/401 (39%), Gaps = 85/401 (21%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A + GK LH ++++  L     + N LI+LY K  +   A  +F +    ++ +WNA+++
Sbjct: 448 AVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIA 506

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
           +    +  E A  LFD                               +M +E F P+ IT
Sbjct: 507 SYVHCEQSEKAIALFD-------------------------------RMVSENFKPSSIT 535

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L ++  A      +E G+  H  + +   + N+ ++ AL+ +YAKCG  + +  +F+  +
Sbjct: 536 LVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN 595

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           + + V +  M+SG      V  A+ +F  M    V     +  ++L  C   G       
Sbjct: 596 QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAG------- 648

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
             +   K    +H   V         + +L   + L+D+ +++G+++ AE    ++P   
Sbjct: 649 LVEQGKKLFLKMHQYDV---------KPNLKHYSCLVDLLSRSGNLEEAESTVMSMP--- 696

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
                                          F PD V    +L +C+  G+ + G  M +
Sbjct: 697 -------------------------------FSPDGVIWGTLLSSCMTHGEFEMGIRMAE 725

Query: 363 SMPS--PSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGV 400
              +  P    +  ML++ YS +   +EA +    M+  GV
Sbjct: 726 RAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGV 766


>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
 gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 186/630 (29%), Positives = 318/630 (50%), Gaps = 53/630 (8%)

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
           ++ + L   YA CG   +A  +FEEM + + +++  ++    +     +A+ +F  M+ +
Sbjct: 50  HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSE 109

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            V             C  +G        A++  +      G  VH   ++  F  D ++ 
Sbjct: 110 GVK------------CVPDG--YTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQ 155

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+LL MY   G ++ A  +F  +  R V+SWN MI+GY +      A+ +   M +   +
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215

Query: 336 PDEVTSINMLVACVRSGDIKTGREM----------------------------------- 360
            D  T ++ML  C    D++ GR +                                   
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FD M    V +W  M++ Y++  + + A++L R MQF GV+P+  T+A ++S C     +
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
             GK +H  +++   + D  + + LI +Y+KC+R +L  RVF    +     W+++IAG 
Sbjct: 336 NDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGC 395

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
             N L  +A   FK+MR+ ++ P   +  ++L + A L+   Q   +H  + K G+++ +
Sbjct: 396 VQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSL 455

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMH----GKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
              + L+ +Y KCG +  A + F+ +      K+ V W  +I GY  +G G  A++++ +
Sbjct: 456 DAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFME 515

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M+ SGV P++ITF + L ACSHSGLV+ G+ +F  M   +      +HYTC++D LGRAG
Sbjct: 516 MVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAG 575

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              EA  LI  +P +    +W  LL++C  H NV+L + AA +LF L+P+N+  Y LLAN
Sbjct: 576 RLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLAN 635

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           IY++LGRW D+  VR +M    + K P +S
Sbjct: 636 IYAALGRWKDMEKVRSMMENVGLRKKPGHS 665



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 233/488 (47%), Gaps = 57/488 (11%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF--VPTHITLASVF 127
           + +A KLF+EMP+ +++S+N +I   VR GL   A+SV+ +M +EG   VP   T   V 
Sbjct: 65  ITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVA 124

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA+  L  ++ G   HG +++    ++ YV NALL++Y   G  + A  VF+ M   + +
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++  M+SG  +   + +AL MF  M+ ++V +D  ++ S+L VC               D
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGH-----------LKD 233

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
            +  RNVH      L  +      + + N+L++MY K G MD A  +F  +  R V++W 
Sbjct: 234 LEMGRNVHK-----LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWT 288

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--------- 358
            MI GY +      A+EL + M+  G  P+ VT  +++  C  +  +  G+         
Sbjct: 289 CMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQ 348

Query: 359 --------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                      +F          W+A+++   Q+E   +A+ LF
Sbjct: 349 QVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLF 408

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           + M+   V+P+  TL  +L + AA+  L     +H    KT        A+GL+ +YSKC
Sbjct: 409 KRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKC 468

Query: 453 QRNELAERVFHRIPE----LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
              E A ++F+ I E     D+V W ++I+G  ++     A   F +M ++ + P + +F
Sbjct: 469 GTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITF 528

Query: 509 ATVLSSCA 516
            + L++C+
Sbjct: 529 TSALNACS 536



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 214/471 (45%), Gaps = 61/471 (12%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D Y  NA+L+       +E A  +FD M  R+V+SWN +IS   RNG    AL +++ M
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
            NE     H T+ S+      L D+E GR  H LV +  L   I V NAL+++Y KCG  
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A  VF+ M   + +T+T M++G  +   V  ALE+ RLM  + V  ++V+++S++ VC
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
                    D    +D        G+ +H   ++    +D+ +  SL+ MYAK   +D  
Sbjct: 330 G--------DALKVND--------GKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-- 349
             +FS   +     W+ +IAG  Q    + A+ L +RM+    EP+  T  ++L A    
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAAL 433

Query: 350 ---------------------------------RSGDIKTGREMFDSM----PSPSVSSW 372
                                            + G +++  ++F+ +     S  V  W
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL- 431
            A++S Y    +   A+++F EM   GV P+  T    L++C+  G++E G  +    L 
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553

Query: 432 --KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
             KT +  ++Y    ++ +  +  R + A  +   IP E     W +++A 
Sbjct: 554 HYKTLARSNHYTC--IVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 184/417 (44%), Gaps = 59/417 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +    L D   + N L+ +Y KC     A+ +FD+M  +D+ +W  +++   +
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE 296

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+                               E AL +   M  EG  P  +T+AS+
Sbjct: 297 DGDV-------------------------------ENALELCRLMQFEGVRPNAVTIASL 325

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                  L V  G+  HG  ++  +  +I +  +L+S+YAKC        VF   S+ + 
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHT 385

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
             ++A+++G  + + V +AL +F+ M R+ V  +  +L+S+L   A           A +
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYA-----------ALA 434

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE----RS 302
           D + + N     +HC   K GF + L  +  L+ +Y+K G ++SA  IF+ + E    + 
Sbjct: 435 DLRQAMN-----IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           VV W  +I+GYG       A+++   M   G  P+E+T  + L AC  SG ++ G  +F 
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549

Query: 363 SMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
            M          + +  ++    ++    EA  L   + F   +P  T    +L++C
Sbjct: 550 FMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPF---EPTSTVWGALLAAC 603


>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 719

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 195/626 (31%), Positives = 319/626 (50%), Gaps = 57/626 (9%)

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
           T  AV V      P+ V     + GL K+ R+ +AL++F  M RK V    V+ ++ +  
Sbjct: 55  TAAAVNVSHAAPPPDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNV----VAWTTAISG 110

Query: 231 CAREG-CGVESDVFAQ------SDNKFSRNVHG------------QQVHCLTIKLGFEAD 271
           C R G     + +FA       + N F+ N               +QVH L ++ GF AD
Sbjct: 111 CTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAAD 170

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
             + + L+++Y++ G + +AE +F  +    VV +  +++   +  +  +A+++L +M  
Sbjct: 171 AWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTR 230

Query: 332 CGFEPDEVTSINMLVACVRS-------------------------------GDIKTGREM 360
            G +P+E T  +ML  C R                                GD  T + +
Sbjct: 231 QGLQPNEHTMTSMLAECPRGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTV 290

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F+++ S +V SW +M+    +     +A+++F EM   GV+P+    +I LS+C ++ + 
Sbjct: 291 FENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVCL- 349

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
             G+Q+H +++K     D  V++ L+ +Y +       E V  +I   D+V W + I+  
Sbjct: 350 --GRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISAN 407

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
             N    +A     QM      P  ++F++ LSSCA L+   QGRQ+H    K G    +
Sbjct: 408 FQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKV 467

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
             G+ALI MY KCG I  AR  FD+M   + ++WN +IHG AQ+G  + A+  + +M +S
Sbjct: 468 CTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSS 527

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
             +PDD TF+++L  C+H+GLV  G   F  M   +G+ P   HY CMID LGR G F E
Sbjct: 528 DWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAE 587

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           A  +I+ MP + D +IW+ LL+SC+LH N+ + K AA++L  L  ++SA Y L++N+Y+ 
Sbjct: 588 ALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAM 647

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
              W D   VR  M E  + KD  +S
Sbjct: 648 HEEWRDAERVRRRMDEIGVKKDAGWS 673



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 155/624 (24%), Positives = 266/624 (42%), Gaps = 95/624 (15%)

Query: 39  THSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRN 98
           T +A ++    P  D+      L    KS  L  A  LFD MP +NVV+W   IS   RN
Sbjct: 55  TAAAVNVSHAAPPPDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRN 114

Query: 99  GLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVA 158
           G  E A +++  M   G  P      +   A  A   +  G + H L ++ G   + ++ 
Sbjct: 115 GRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIG 174

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           + L+ LY++CG  + A  VF  M  P+ V +T+++S L +   +  A+++   M R+ + 
Sbjct: 175 SCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQ 234

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            +  +++S+L  C R   G+                 G+Q+H   +K+     ++ S +L
Sbjct: 235 PNEHTMTSMLAECPR---GI-----------------GEQIHGYMLKVMGSQSVYASTAL 274

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +D Y++ GD  +A+ +F NL  ++VVSW  M+    +  +   A+ +   M S G +P+E
Sbjct: 275 IDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNE 334

Query: 339 VTSINMLVAC--------------------------------VRSGDIKTGREMFDSMPS 366
                 L AC                                 RSG +     +   + +
Sbjct: 335 FAFSIALSACGSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIEN 394

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           P + SW A +S+  Q+   ++A+ L  +M   G  P+    +  LSSCA + +L  G+Q+
Sbjct: 395 PDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQL 454

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H  +LK          + LI +YSKC R   A   F  +   D++ WNS+I GL+ +   
Sbjct: 455 HCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDA 514

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
             A   F +M  ++  P   +F +VL  C            HA + K+G           
Sbjct: 515 NLALETFSEMCSSDWRPDDSTFLSVLVGCN-----------HAGLVKEG----------- 552

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVT-----WNEMIHGYAQNGYGDEAVRLYKDMIASG 601
                          FF  M  +  +T     +  MI    +NG   EA+R+ ++M    
Sbjct: 553 -------------ETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENM---P 596

Query: 602 VKPDDITFVAILTACSHSGLVDVG 625
            +PD + +  +L +C     +D+G
Sbjct: 597 FEPDVLIWKTLLASCKLHRNLDIG 620



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 205/432 (47%), Gaps = 28/432 (6%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
           ++   M  + +Y+  A++    +  D   A  +F+ +  +NVVSW +++   +R+G  + 
Sbjct: 258 YMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDD 317

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           AL V+++M +EG  P     +    A  +   V  GR+ H   IK  L  +I V+NALLS
Sbjct: 318 ALRVFSEMISEGVQPNEFAFSIALSACGS---VCLGRQIHCSAIKRDLMTDIRVSNALLS 374

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y + G+      V  ++  P+ V++TA +S   +     +A+ +   M  +  + +  +
Sbjct: 375 MYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYA 434

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
            SS L  CA                  +    G+Q+HCL +KLG +  +   N+L++MY+
Sbjct: 435 FSSGLSSCA----------------DLALLHQGRQLHCLALKLGCDFKVCTGNALINMYS 478

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K G + SA + F  +    V+SWN +I G  Q   +  A+E    M S  + PD+ T ++
Sbjct: 479 KCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLS 538

Query: 344 MLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           +LV C  +G +K G   F  M      +P+ S +  M+    ++    EA+++   M F 
Sbjct: 539 VLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPF- 597

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
             +PD      +L+SC     L+ GK + A  L   S  D+     +  +Y+  +    A
Sbjct: 598 --EPDVLIWKTLLASCKLHRNLDIGK-LAADKLMELSERDSASYVLMSNLYAMHEEWRDA 654

Query: 459 ERVFHRIPELDI 470
           ERV  R+ E+ +
Sbjct: 655 ERVRRRMDEIGV 666



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 224/534 (41%), Gaps = 102/534 (19%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H+  +R G   D ++ + LIELYS+C +  +A+ +F +M   D+  + +++SA C    
Sbjct: 158 VHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALC---- 213

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                                      RNG   +A+ V  +M+ +G  P   T+ S+   
Sbjct: 214 ---------------------------RNGELARAVDVLCQMTRQGLQPNEHTMTSMLAE 246

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
               +    G + HG ++K+   +++Y + AL+  Y++ G    A  VFE +   N V++
Sbjct: 247 CPRGI----GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSW 302

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            +MM    +  R+ +AL +F  MI + V  +  + S  L  C                  
Sbjct: 303 CSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSV--------------- 347

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+Q+HC  IK     D+ +SN+LL MY ++G +   E +   +    +VSW   
Sbjct: 348 ----CLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAA 403

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------------- 349
           I+   Q   S KA+ LL +M S GF P++    + L +C                     
Sbjct: 404 ISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGC 463

Query: 350 ---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + G I + R  FD M +  V SWN+++   +Q  +   A++ F E
Sbjct: 464 DFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSE 523

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQV------HAASLKTASHIDNYVASGLIGI 448
           M     +PD +T   +L  C   G+++ G+              T SH      + +I +
Sbjct: 524 MCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHY-----ACMIDM 578

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-SLDIEAFMFFKQMRQNE 500
             +  R   A R+   +P E D++ W +++A   L+ +LDI      K M  +E
Sbjct: 579 LGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSE 632



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 11/121 (9%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH   L+ G        N LI +YSKC    SA+  FD M   D+ SWN+++    +
Sbjct: 451 GRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQ 510

Query: 67  SDDLEFAYKLFDEMPERNVVSW----NNLISALV---RNGLEEKALSVYNKMSNE-GFVP 118
             D   A + F EM   +   W    +  +S LV     GL ++  + + +M++  G  P
Sbjct: 511 HGDANLALETFSEMCSSD---WRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTP 567

Query: 119 T 119
           T
Sbjct: 568 T 568


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 166/529 (31%), Positives = 283/529 (53%), Gaps = 37/529 (6%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+++H   +K G + D+ + N+L+ MY +   ++ A ++F  + ER VVSW+ MI    +
Sbjct: 113 GKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSR 172

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------------ 357
             +   A+EL++ M      P EV  ++M+     + +++ G                  
Sbjct: 173 NKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGV 232

Query: 358 -------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                              R++F+ +   +V SW AM++   +S   +E  KLF  MQ  
Sbjct: 233 PTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEE 292

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
            + P+  T+  ++  C   G L+ GKQ+HA  L+    +   +A+ L+ +Y KC     A
Sbjct: 293 NIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNA 352

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
             +F      D++ W +M++  +  +   +AF  F QMR + + PT+ +  ++LS CA  
Sbjct: 353 RALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVA 412

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
            +   G+ VH+ I+K+    D  + +AL++MY KCGDI  A + F     ++   WN +I
Sbjct: 413 GALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAII 472

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            G+A +GYG+EA+ ++ +M   GVKP+DITF+ +L ACSH+GLV  G ++F  M    G+
Sbjct: 473 TGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGL 532

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
            P ++HY CM+D LGRAG   EA  +I  MP K + ++W  L+++CRLH N +L + AA 
Sbjct: 533 VPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAAT 592

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           +L  ++P+N     L++NIY++  RW D   VR+ M    + K+P +S+
Sbjct: 593 QLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSV 641



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 241/493 (48%), Gaps = 55/493 (11%)

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV KA   +   + G+  HG V+K GLD++++V NAL+ +Y +C   ++A  VF++M E 
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V+++ M+  L++      ALE+ R M    V    V++ S++            ++FA
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMV------------NLFA 206

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHL--SNSLLDMYAKNGDMDSAEVIFSNLPERS 302
            + N       G+ +H   I+      + +  + +LLDMYAK G +  A  +F+ L +++
Sbjct: 207 DTANMRM----GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKT 262

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------- 348
           VVSW  MIAG  +  +  +  +L  RM+     P+E+T ++++V C              
Sbjct: 263 VVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHA 322

Query: 349 --VRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
             +R+G                   DI+  R +FDS  +  V  W AMLS+Y+Q+    +
Sbjct: 323 YILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQ 382

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A  LF +M+  GV+P + T+  +LS CA  G L+ GK VH+   K    +D  + + L+ 
Sbjct: 383 AFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVD 442

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+KC     A R+F      DI  WN++I G +++    EA   F +M +  + P   +
Sbjct: 443 MYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDIT 502

Query: 508 FATVLSSCAKLSSSFQGRQVHAQ-IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           F  +L +C+      +G+++  + +   G V  I     ++++  + G +  A +    M
Sbjct: 503 FIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSM 562

Query: 567 HGK-NTVTWNEMI 578
             K NT+ W  ++
Sbjct: 563 PIKPNTIVWGALV 575



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/518 (22%), Positives = 233/518 (44%), Gaps = 90/518 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  +L+ GL  D F+ N L+ +Y +C     A+ +FDKM  +D+ SW+ ++ +  +
Sbjct: 113 GKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSR 172

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           + + + A +L  EM         N +   VR                    P+ + + S+
Sbjct: 173 NKEFDMALELIREM---------NFMQ--VR--------------------PSEVAMVSM 201

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYV--ANALLSLYAKCGWTKHAVPVFEEMSEP 184
                   ++  G+  H  VI+   ++++ V    ALL +YAKCG    A  +F  +++ 
Sbjct: 202 VNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQK 261

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
             V++TAM++G  +++R+ E  ++F  M  + +  + +++ S++  C   G         
Sbjct: 262 TVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGA-------- 313

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+Q+H   ++ GF   L L+ +L+DMY K  D+ +A  +F +   R V+
Sbjct: 314 --------LQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVM 365

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------- 348
            W  M++ Y Q     +A  L  +M++ G  P +VT +++L  C                
Sbjct: 366 IWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYI 425

Query: 349 -------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + GDI     +F    S  +  WNA+++ ++     +EA+
Sbjct: 426 DKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEAL 485

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT---ASHIDNYVASGLI 446
            +F EM+ +GVKP+  T   +L +C+  G++  GK++    + T      I++Y    ++
Sbjct: 486 DIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHY--GCMV 543

Query: 447 GIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
            +  +    + A  +   +P + + + W +++A   L+
Sbjct: 544 DLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 581



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 144/278 (51%), Gaps = 8/278 (2%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L +C  +   + GK++H   LK     D +V + L+ +Y +C   E A  VF ++ E D
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W++MI  LS N     A    ++M   ++ P++ +  ++++  A  ++   G+ +HA
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219

Query: 530 QIEKDGYVNDIFVG----SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
            + ++   N+  +G    +AL++MY KCG +  ARQ F+ +  K  V+W  MI G  ++ 
Sbjct: 220 YVIRNS--NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSN 277

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
             +E  +L+  M    + P++IT ++++  C  +G + +G ++ ++  L +G    L   
Sbjct: 278 RLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQL-HAYILRNGFSVSLALA 336

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           T ++D  G+      A  L D    + D +IW  +LS+
Sbjct: 337 TALVDMYGKCSDIRNARALFDSTQNR-DVMIWTAMLSA 373



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 14/203 (6%)

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           F   +VL +C ++S +  G+++H  + K G   D+FVG+AL+ MY +C  +  AR  FD 
Sbjct: 95  FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           M  ++ V+W+ MI   ++N   D A+ L ++M    V+P ++  V+++   + +  + +G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214

Query: 626 VE-----IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
                  I NS     GV       T ++D   + GH   A  L + +  K   V W  +
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTT----TALLDMYAKCGHLGLARQLFNGLTQK-TVVSWTAM 269

Query: 681 LSSC----RLHANVRLAKRAAEE 699
           ++ C    RL    +L  R  EE
Sbjct: 270 IAGCIRSNRLEEGTKLFIRMQEE 292


>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Brachypodium distachyon]
          Length = 757

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 193/635 (30%), Positives = 332/635 (52%), Gaps = 57/635 (8%)

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           L +N  + N L+++Y +C   + A  VF+EM   N V++ ++++  A+  R  +AL +F 
Sbjct: 72  LVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFS 131

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
            M+R   + D  +L S +  CA  G  GV                 G+QVH   +K    
Sbjct: 132 SMLRSGTAPDQFALGSTVRACAELGDIGV-----------------GRQVHAQAMKSENG 174

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           +DL + N+L+ MY+K+G +    ++F  + E+  +SW  +IAG+ Q+    +A+++ + M
Sbjct: 175 SDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREM 234

Query: 330 KSCGFE-PDEVTSINMLVAC-----------------------------------VRSGD 353
            + G   P+E    ++  AC                                    R   
Sbjct: 235 VAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKK 294

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           +++ + +F  + +P + SWN+++++ S      EA+ L  EM+  G++PD  T+  +L +
Sbjct: 295 LESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCA 354

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           C     ++ G+ +H+  +K     D  V + L+ +Y++C     A  VFH   + D+V W
Sbjct: 355 CVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTW 414

Query: 474 NSMI-AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           NS++ A +    L++  F  F  ++++     + S   VLS+ A+L      +QVH    
Sbjct: 415 NSILTACVQHQHLEV-VFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTF 473

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAV 591
           K G VND  + + LI+ Y KCG +  A + F+MM   + V +W+ +I GYAQ+GY  +A+
Sbjct: 474 KVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKAL 533

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
            L+  M   GV+P+ +TFV +LTACS  GLVD G   ++ M+ +HGV P  +H +C+ID 
Sbjct: 534 DLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDL 593

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY 711
           L RAG   EA   +D+MP + D V+W+ LL+  + H +V + +RAAE +  +DP +SA Y
Sbjct: 594 LARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAY 653

Query: 712 SLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            LL NIYS+ G W++   +++ M  + + K P  S
Sbjct: 654 VLLCNIYSASGDWNEFARLKKAMRSSGVKKSPGKS 688



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 170/678 (25%), Positives = 294/678 (43%), Gaps = 123/678 (18%)

Query: 2   KAHVAGKLLHAHILRN---GLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           +A   G L+H H+L +    L  +T L N LI +Y +C    SA+               
Sbjct: 52  RALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESAR--------------- 96

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
                            +FDEMP +N VSW ++I+A  +N     AL +++ M   G  P
Sbjct: 97  ----------------LVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAP 140

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
               L S  +A   L D+  GR+ H   +K     ++ V NAL+++Y+K G       +F
Sbjct: 141 DQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLF 200

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS-IDSVSLSSVLGVCAREGCG 237
             M E + +++ ++++G A+    +EAL++FR M+ + +   +     SV   C   G  
Sbjct: 201 GRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLG-S 259

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           +E               +G+Q+H L++K   + + +   SL DMYA+   ++SA+ +F  
Sbjct: 260 LE---------------YGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYG 304

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +    +VSWN +I     +   ++A+ LL  M+  G  PD +T   +L ACV    I+ G
Sbjct: 305 IDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHG 364

Query: 358 REM-----------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
           R M                                   F       V +WN++L++  Q 
Sbjct: 365 RLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQH 424

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
           ++ +   KLF  +Q      DR +L  +LS+ A +G  E  KQVH  + K     D  ++
Sbjct: 425 QHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLS 484

Query: 443 SGLIGIYSKCQRNELAERVFHRI-PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
           +GLI  Y+KC   + A ++F  +    D+  W+S+I G + +    +A   F +MR   +
Sbjct: 485 NGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGV 544

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGAR 560
            P   +F  VL++C+++    +G   ++ +E + G +      S +I++  + G +  A 
Sbjct: 545 RPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAA 604

Query: 561 QFFDMM-HGKNTVTWNEMIHG----------------------------------YAQNG 585
           +F D M    + V W  ++ G                                  Y+ +G
Sbjct: 605 KFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLLCNIYSASG 664

Query: 586 YGDEAVRLYKDMIASGVK 603
             +E  RL K M +SGVK
Sbjct: 665 DWNEFARLKKAMRSSGVK 682


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 204/676 (30%), Positives = 324/676 (47%), Gaps = 103/676 (15%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
            R  H  ++  G   N ++ N L+++Y K     +A  +F+++ +P+ V  T ++S  + 
Sbjct: 24  ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83

Query: 199 TDRVVEALEMFR---LMIRKAVSIDSVSLSSVLG-----------VCAREGCGVESDVFA 244
           +  V  A ++F    L IR  VS +++  +   G              R G   +   F+
Sbjct: 84  SGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFS 143

Query: 245 QSDNKFS----RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA---------KNGDMDSA 291
              +  S       H Q +HC  IKLG      ++N+LL  Y           +  M SA
Sbjct: 144 SVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASA 203

Query: 292 EVIFSNLPERSVV--SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
             +F   P+  +   SW  MIAGY                                   V
Sbjct: 204 RKVFDETPKNQIYEPSWTTMIAGY-----------------------------------V 228

Query: 350 RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
           R+ D+   RE+ D +  P   +WNAM+S Y +   ++EA   FR M   G++ D  T   
Sbjct: 229 RNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTS 288

Query: 410 ILSSCAA----MGILESGKQVHAASLKT----ASHIDNYVASGLIGIYSKCQRNELAERV 461
           ++S+C +    MG+   G+QVH   L+T    + H    V + LI  Y+K  R   A RV
Sbjct: 289 LISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRV 348

Query: 462 FHRIPELDIVCWNS-------------------------------MIAGLSLNSLDIEAF 490
           F ++P  DI+ WN+                               MI+GL+ N    E  
Sbjct: 349 FDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGL 408

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
             F QM+   + P  ++FA  +++C+ L S   G+Q+H+Q+ + G+ + +  G+ALI MY
Sbjct: 409 KLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMY 468

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            +CG +  A   F  M   ++V+WN MI   AQ+G+G +A+ L++ M+   + PD ITF+
Sbjct: 469 SRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFL 528

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
            ILTAC+H+GL+  G   F++M   +G+ P  DHY  +ID L RAG F +A+ +I  MP 
Sbjct: 529 TILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPF 588

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
           +    IWE LL+ CR+H N+ L  +AA+ L  L P     Y +L+N+Y++LG+WD++  V
Sbjct: 589 EAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARV 648

Query: 731 RELMSENCIVKDPAYS 746
           R LM E  + K+P  S
Sbjct: 649 RLLMRERGVKKEPGCS 664



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 227/538 (42%), Gaps = 127/538 (23%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
             +  + +HAHIL +G   +TF+ NRLI +Y K +N   A+ LFDK+P  DI +   +LS
Sbjct: 20  TQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLS 79

Query: 63  AQCKSDDLEFAYKLFDEMPE--RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           A   S +++ A +LF+  P   R+ VS+N +I+A         AL+++ +M   GF+P  
Sbjct: 80  AYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDP 139

Query: 121 ITLASVFKASTALLDVE-HGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------- 169
            T +SV  A + + D E H +  H  VIK+G      V NALLS Y  C           
Sbjct: 140 FTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQL 199

Query: 170 --------------------WTK------------HAVPVFEEMSEPNEVTFTAMMSGLA 197
                               WT              A  + + ++ P +V + AM+SG  
Sbjct: 200 MASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYV 259

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
           +     EA + FR M    +  D  + +S++  C    C  +  +F            G+
Sbjct: 260 RRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACG--SCNEKMGMFNC----------GR 307

Query: 258 QVHCLTIKLGFEADLH----LSNSLLDMYAKNGDM------------------------- 288
           QVH   ++   E   H    ++N+L+  Y K   M                         
Sbjct: 308 QVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGY 367

Query: 289 ------DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
                 + A  IFS +PER+V++W VMI+G  Q     + ++L  +MKS G EP +    
Sbjct: 368 VNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFA 427

Query: 343 NMLVAC-----------------------------------VRSGDIKTGREMFDSMPSP 367
             + AC                                    R G +++   +F +MP  
Sbjct: 428 GAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYV 487

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
              SWNAM+++ +Q  +  +AI+LF +M    + PDR T   IL++C   G+++ G+ 
Sbjct: 488 DSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRH 545



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 215/461 (46%), Gaps = 50/461 (10%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTH---------SAQHLFDKMPHKDIY--S 56
           ++LH  +++ G      + N L+  Y  C ++          SA+ +FD+ P   IY  S
Sbjct: 160 QMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPS 219

Query: 57  WNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
           W  +++   ++DDL  A +L D +     V+WN +IS  VR GL E+A   + +M + G 
Sbjct: 220 WTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGI 279

Query: 117 VPTHITLASVFKASTALLD----VEHGRRCHGLVIKIGLDKN----IYVANALLSLYAKC 168
                T  S+  A  +  +       GR+ HG +++  ++ +    + V NAL++ Y K 
Sbjct: 280 QEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKY 339

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
                A  VF++M   + +++ A++SG     R+ EA  +F  M  + V   +V +S + 
Sbjct: 340 DRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGL- 398

Query: 229 GVCAREGCGVE---------SDVFAQSDNKFSRNV----------HGQQVHCLTIKLGFE 269
              A+ G G E         S+     D  F+  +          +GQQ+H   I+LG +
Sbjct: 399 ---AQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHD 455

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           + L   N+L+ MY++ G ++SAE +F  +P    VSWN MIA   Q     KAIEL ++M
Sbjct: 456 SGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQM 515

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-----PSPSVSSWNAMLSSYSQSEN 384
                 PD +T + +L AC  +G IK GR  FD+M      +P    +  ++    ++  
Sbjct: 516 MKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGM 575

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
             +A  + + M F    P    L   L+ C   G +E G Q
Sbjct: 576 FLKAQSVIKSMPFEAGAPIWEAL---LAGCRIHGNMELGIQ 613



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLC----NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           G+ +H +ILR  +           N LI  Y+K +    A+ +FDKMP +DI SWNA+LS
Sbjct: 306 GRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLS 365

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
               +  +E A  +F EMPERNV++W  +IS L +NG  E+ L ++N+M +EG  P    
Sbjct: 366 GYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYA 425

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            A    A + L  +++G++ H  VI++G D  +   NAL+++Y++CG  + A  VF  M 
Sbjct: 426 FAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMP 485

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             + V++ AM++ LA+    V+A+E+F  M+++ +  D ++  ++L  C   G   E   
Sbjct: 486 YVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRH 545

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
           +  +               +  + G          L+D+  + G    A+ +  ++P E 
Sbjct: 546 YFDT---------------MCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEA 590

Query: 302 SVVSWNVMIAG 312
               W  ++AG
Sbjct: 591 GAPIWEALLAG 601


>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
 gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
          Length = 762

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 192/600 (32%), Positives = 320/600 (53%), Gaps = 61/600 (10%)

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVF 243
           N  T+T MM  L    R  +A+ +FR M+R+   S D V++++VL V    GC V +   
Sbjct: 101 NAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLNV---PGCDVGT--- 154

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                          +H +  KLGF A + + N+LLD Y K G + +A  +F  +P R  
Sbjct: 155 ---------------LHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDS 199

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---- 359
           +++N MI G  ++ +  +A+EL   M+  G +    T  ++L       D+  GR+    
Sbjct: 200 ITYNAMIMGCSRQGRHGEALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGL 259

Query: 360 -------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                          +FD M      S+N M+S+ S +     A
Sbjct: 260 FVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMA 319

Query: 389 IKLFREMQFRGVKPDRTTL--AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           ++LFR+MQ  G   DR TL  A +LS   A+  ++ G+Q+HA  +     ++++V + LI
Sbjct: 320 LQLFRDMQTLGF--DRRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALI 377

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
            +YSKC   + A+ +F    +   + W ++I G   N  + EA   F  MR+  + P + 
Sbjct: 378 DMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRA 437

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           + ++++ S + L+    GRQ+HA + K G++  +F GSAL++MY KCG +  A + F+ M
Sbjct: 438 TCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEM 497

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             KN++TWN +I  YAQ G    A+R++  M+  G+ PD +TF+++L AC H+GL +  +
Sbjct: 498 PEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECM 557

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           + F+ M+  + + P  +HY+C+ID LGRAG F + + +IDEMP +DDP+IW  +L SCR+
Sbjct: 558 KYFDLMRYYYSMSPWKEHYSCVIDTLGRAGCFDKIQKVIDEMPFEDDPIIWSSILHSCRI 617

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + N  LA  AAE+LF + P ++  Y +L+NIY+  G W+    V+++M +  + K+   S
Sbjct: 618 YGNQDLATVAAEKLFTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVKKESGNS 677



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 156/609 (25%), Positives = 272/609 (44%), Gaps = 92/609 (15%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +L A CK   +  A ++F EMP R+ +++N +I    R G   +AL ++  M  EG  
Sbjct: 172 NTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMRREGVD 231

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
            +H T +S+   +T ++D+  GR+ HGL ++     N++V NALL  Y+KC        +
Sbjct: 232 TSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQL 291

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+EMSE + V++  M+S  +       AL++FR M        ++  +S+L V       
Sbjct: 292 FDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAG----- 346

Query: 238 VESDVFAQSDNKFSRNVHGQQV-HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                 A    K  R +H Q + H LT+      +  + N+L+DMY+K G +D+A+ IF+
Sbjct: 347 ------ALPHIKIGRQIHAQLILHGLTL------EDFVGNALIDMYSKCGMLDAAKTIFA 394

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
              +++ +SW  +I G  Q  Q+ +A++L   M+  G  PD  T  +++ +      I  
Sbjct: 395 YKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGI 454

Query: 357 GREM-----------------------------------FDSMPSPSVSSWNAMLSSYSQ 381
           GR++                                   F+ MP  +  +WNA++S+Y+Q
Sbjct: 455 GRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQ 514

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ------VHAASLKTAS 435
               K AI++F  M   G+ PD  T   +L++C   G+ E   +       + +      
Sbjct: 515 YGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMSPWKE 574

Query: 436 HIDNYVAS-GLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSL-NSLDIEAFMF 492
           H    + + G  G + K Q      +V   +P E D + W+S++    +  + D+     
Sbjct: 575 HYSCVIDTLGRAGCFDKIQ------KVIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAA 628

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
            K      M PT  +   +LS+    + +++G     +I +D  V     G++ +E+  K
Sbjct: 629 EKLF---TMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVKK-ESGNSWVEIKQK 684

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD---ITF 609
              IY        M   N  T N MI    +     E  RLY++M   G +PD    +  
Sbjct: 685 ---IY--------MFSSNDHT-NPMIDEIKK-----ELERLYEEMDKQGYEPDTSCALHM 727

Query: 610 VAILTACSH 618
           V+++  C H
Sbjct: 728 VSMVFYCIH 736



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 234/515 (45%), Gaps = 60/515 (11%)

Query: 41  SAQHLFDKMPHKD---IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVR 97
           +A+ + D++P K    +   N IL    +S DL  A  LF     RN  +W  ++  L  
Sbjct: 55  AARKVLDQVPEKSTLYLRFLNRILLGCSRSCDLSAAKALFSAAARRNAKTWTIMMRMLPA 114

Query: 98  NGLEEKALSVYNKMSNEGFV-PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIY 156
           +G    A+S++  M  EG   P  +T+ +V        DV      H +V K+G   ++ 
Sbjct: 115 DGRGSDAVSLFRDMLREGEASPDDVTITTVLNVPGC--DVG---TLHPVVTKLGFGASVV 169

Query: 157 VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
           V N LL  Y K G+   A  VF EM   + +T+ AM+ G ++  R  EALE+F  M R+ 
Sbjct: 170 VCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMRREG 229

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V     + SS+L V                D    R +HG     L ++     ++ ++N
Sbjct: 230 VDTSHFTFSSLLTVAT-----------GMVDLHLGRQIHG-----LFVRANPSCNVFVNN 273

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +LLD Y+K   +   + +F  + ER  VS+NVMI+          A++L + M++ GF+ 
Sbjct: 274 ALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDR 333

Query: 337 DEVTSINMLVACVRSGDIKTGRE----------------------------MFDSMPS-- 366
             +   ++L        IK GR+                            M D+  +  
Sbjct: 334 RTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIF 393

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                 +  SW A+++   Q+  ++EA++LF +M+  G+ PDR T + I+ S +++ ++ 
Sbjct: 394 AYKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIG 453

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G+Q+HA   K+      +  S L+ +Y+KC   + A R F+ +PE + + WN++I+  +
Sbjct: 454 IGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYA 513

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
                  A   F  M    + P   +F +VL++C 
Sbjct: 514 QYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACG 548



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 217/470 (46%), Gaps = 47/470 (10%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQH---LFDKM-PHKDIYSWNAILSAQC 65
           L A + R G+    F  + L+ + +   + H  +    LF +  P  +++  NA+L    
Sbjct: 221 LFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYS 280

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K D L    +LFDEM ER+ VS+N +ISA   N     AL ++  M   GF    +  AS
Sbjct: 281 KCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDRRTLPYAS 340

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +   + AL  ++ GR+ H  +I  GL    +V NAL+ +Y+KCG    A  +F   S+  
Sbjct: 341 LLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKT 400

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS---------SVLGVCAREGC 236
            +++TA+++G  +  +  EAL++F  M R  +S D  + S         +V+G+      
Sbjct: 401 AISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGI------ 454

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                              G+Q+H    K G    +   ++LLDMYAK G +D A   F+
Sbjct: 455 -------------------GRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFN 495

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            +PE++ ++WN +I+ Y Q  Q+  AI +   M  CG  PD VT +++L AC  +G  + 
Sbjct: 496 EMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEE 555

Query: 357 GREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
             + FD M      SP    ++ ++ +  ++    +  K+  EM F   + D    + IL
Sbjct: 556 CMKYFDLMRYYYSMSPWKEHYSCVIDTLGRAGCFDKIQKVIDEMPF---EDDPIIWSSIL 612

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            SC   G  +    V A  L T    D      L  IY+K    E A RV
Sbjct: 613 HSCRIYGN-QDLATVAAEKLFTMVPTDATAYVILSNIYAKAGNWEGAARV 661



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 176/419 (42%), Gaps = 74/419 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA ++ +GL  + F+ N LI++YSKC    +A+ +F     K   SW A       
Sbjct: 354 GRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTA------- 406

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LI+  V+NG  E+AL ++  M   G  P   T +S+
Sbjct: 407 ------------------------LITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSI 442

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K+S++L  +  GR+ H  + K G   +++  +ALL +YAKCG    A+  F EM E N 
Sbjct: 443 MKSSSSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNS 502

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
           +T+ A++S  A+  +   A+ MF  M+   +  D V+  SVL  C   G   E    F  
Sbjct: 503 ITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDL 562

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVV 304
               +S +   +   C                ++D   + G  D  + +   +P E   +
Sbjct: 563 MRYYYSMSPWKEHYSC----------------VIDTLGRAGCFDKIQKVIDEMPFEDDPI 606

Query: 305 SWNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV-----ACVRSGDIKT 356
            W+ ++     YG +  +T A E L  M      P + T+  +L      A    G  + 
Sbjct: 607 IWSSILHSCRIYGNQDLATVAAEKLFTMV-----PTDATAYVILSNIYAKAGNWEGAARV 661

Query: 357 GREMFD-SMPSPSVSSWNA------MLSSYSQS-----ENHKEAIKLFREMQFRGVKPD 403
            + M D  +   S +SW        M SS   +     E  KE  +L+ EM  +G +PD
Sbjct: 662 KKIMRDRGVKKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKKELERLYEEMDKQGYEPD 720



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 8/117 (6%)

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VKPDDITFVAILTACSHSGLVDVGVE 627
           +N  TW  M+     +G G +AV L++DM+  G   PDD+T   +L         DVG  
Sbjct: 100 RNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLNVPG----CDVGTL 155

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
                +L  G   ++     ++D   + G    A  +  EMP +D  + +  ++  C
Sbjct: 156 HPVVTKLGFGASVVV--CNTLLDAYCKQGFIAAARRVFLEMPHRDS-ITYNAMIMGC 209


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/587 (32%), Positives = 309/587 (52%), Gaps = 40/587 (6%)

Query: 162 LSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDS 221
           +S +A+ G    A  +F+++      ++ A+++G     R  EA ++F  M  +    ++
Sbjct: 23  ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPER----NT 78

Query: 222 VSLSSVLGVCAREGCGVES-DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
           +S + ++    + G   E+  VF   D    RNV                      S++ 
Sbjct: 79  ISWNGLVSGYVKNGMISEARKVF---DKMPERNVVSW------------------TSMVR 117

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
            Y + G +D AE++F  +PE++VVSW VM+ G  +  +  +A  L   +       D V 
Sbjct: 118 GYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPV----KDVVA 173

Query: 341 SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
           S NM+      G +   RE+FD MP  +V +W +M+S Y+ +     A KLF  M     
Sbjct: 174 STNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVM----- 228

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAE 459
            PD+     +  +    G   SG+   AA L  A  +    A +G+I  +        A 
Sbjct: 229 -PDKNE---VTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKAR 284

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            VF ++ E D   W+++I        ++EA   F  M++  + P   S  ++LS C  L+
Sbjct: 285 WVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLA 344

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S   GRQVH+Q+ +  +  DI+V S LI MY KCGD+   ++ FD    K+ V WN +I 
Sbjct: 345 SLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIA 404

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GYAQ+G+G++A+ ++ +M +SG  PD+ITF+ +L+AC ++G V  G+EIF SM+  + V+
Sbjct: 405 GYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVD 464

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
              +HY CM+D LGRAG  +EA  LI+ MP + D ++W  LLS+CR H N+ LA+ AA++
Sbjct: 465 QKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKK 524

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L +L+P ++ PY LL+N+Y+S  RW D+  +R+ M    + K P  S
Sbjct: 525 LLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCS 571



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 160/594 (26%), Positives = 269/594 (45%), Gaps = 103/594 (17%)

Query: 30  IELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWN 89
           I  +++      A+++FD +  K + SWNAI++    +     A KLFD+MPERN +SWN
Sbjct: 23  ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWN 82

Query: 90  NLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI 149
            L+S  V+NG+  +A  V++KM                                      
Sbjct: 83  GLVSGYVKNGMISEARKVFDKMP------------------------------------- 105

Query: 150 GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
             ++N+    +++  Y + G    A  +F  M E N V++T M+ GL +  RV EA  +F
Sbjct: 106 --ERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLF 163

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
            ++  K V     S + + G+C+        ++F   D    RNV               
Sbjct: 164 DMIPVKDV---VASTNMIGGLCSEGRLSEAREIF---DEMPQRNVVAW------------ 205

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
                  S++  YA N  +D A  +F  +P+++ V+W  M+ GY +  +  +A EL + M
Sbjct: 206 ------TSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAM 259

Query: 330 KSCGFEPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                +P  V + N M++    +G++   R +FD M      +W+A++  Y +     EA
Sbjct: 260 P---VKP--VAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEA 314

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           + LF  MQ  GV+P+  ++  ILS C ++  L+ G+QVH+  +++   +D YV+S LI +
Sbjct: 315 LALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITM 374

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y KC      +RVF R    DIV WNS+IAG + +    +A   F +M  +   P + +F
Sbjct: 375 YIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITF 434

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
             VLS+C                   GY   +  G   +E++      Y   Q       
Sbjct: 435 IGVLSAC-------------------GYTGKVKEG---LEIFESMKSKYQVDQ------- 465

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC-SHSGL 621
             T  +  M+    + G  +EA+ L ++M    V+ D I + A+L+AC +H  L
Sbjct: 466 -KTEHYACMVDLLGRAGKLNEAMNLIENM---PVEADAIVWGALLSACRTHKNL 515



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 211/462 (45%), Gaps = 77/462 (16%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N ++  Y        AQ LFDKMP ++  SWN ++S   K+  +  A K+FD+MPERNVV
Sbjct: 51  NAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVV 110

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK------------------ 128
           SW +++   V+ GL ++A  ++ +M  +  V   + L  + +                  
Sbjct: 111 SWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKD 170

Query: 129 --ASTALLD--VEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
             AST ++      GR      I   +  +N+    +++S YA       A  +FE M +
Sbjct: 171 VVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPD 230

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI------------------------ 219
            NEVT+TAM+ G  ++ R+ EA E+F+ M  K V+                         
Sbjct: 231 KNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQM 290

Query: 220 ---DSVSLSSVLGVCAREGCGVES-DVFAQSDNKFSRNV------------------HGQ 257
              D  + S+++ +  R+G  +E+  +F+    +  R                    HG+
Sbjct: 291 KEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGR 350

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           QVH   ++  F+ D+++S+ L+ MY K GD+ + + +F     + +V WN +IAGY Q  
Sbjct: 351 QVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHG 410

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSP-----SVSSW 372
              KA+E+   M S G  PDE+T I +L AC  +G +K G E+F+SM S          +
Sbjct: 411 FGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHY 470

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
             M+    ++    EA+ L   M    V+ D      +LS+C
Sbjct: 471 ACMVDLLGRAGKLNEAMNLIENMP---VEADAIVWGALLSAC 509



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 208/451 (46%), Gaps = 41/451 (9%)

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
           F +   ++   +  +A+ G +D A  IF +L  ++V SWN ++AGY    +  +A +L  
Sbjct: 12  FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
           +M     E + ++   ++   V++G I   R++FD MP  +V SW +M+  Y Q     E
Sbjct: 72  KMP----ERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDE 127

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS-GLI 446
           A  LF  M  + V     +  ++L      G++E G+   A  L     + + VAS  +I
Sbjct: 128 AELLFWRMPEKNV----VSWTVMLG-----GLIEDGRVDEARRLFDMIPVKDVVASTNMI 178

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS-LDIEAFMFFKQMRQNEMYPTQ 505
           G      R   A  +F  +P+ ++V W SMI+G ++N+ +D+   +F     +NE+  T 
Sbjct: 179 GGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTA 238

Query: 506 ----FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
               ++ +  ++  A+L  +   + V A        N + +G  L       G++  AR 
Sbjct: 239 MLKGYTRSGRINEAAELFKAMPVKPVAA-------CNGMIMGFGL------NGEVGKARW 285

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            FD M  K+  TW+ +I  Y + G+  EA+ L+  M   GV+P+  + ++IL+ C     
Sbjct: 286 VFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLAS 345

Query: 622 VDVGVEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           +D G ++ + +   H     LD Y  + +I    + G     + + D    K D V+W  
Sbjct: 346 LDHGRQVHSQLVRSHF---DLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSK-DIVMWNS 401

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
           +++    H      ++A E    +    +AP
Sbjct: 402 IIAGYAQHG---FGEKALEVFHEMFSSGAAP 429



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 33/190 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+ ++R+    D ++ + LI +Y KC +  + + +FD+   KDI  WN+I      
Sbjct: 349 GRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSI------ 402

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    I+   ++G  EKAL V+++M + G  P  IT   V
Sbjct: 403 -------------------------IAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGV 437

Query: 127 FKASTALLDVEHGRRC-HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EP 184
             A      V+ G      +  K  +D+       ++ L  + G    A+ + E M  E 
Sbjct: 438 LSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEA 497

Query: 185 NEVTFTAMMS 194
           + + + A++S
Sbjct: 498 DAIVWGALLS 507


>gi|224066771|ref|XP_002302207.1| predicted protein [Populus trichocarpa]
 gi|222843933|gb|EEE81480.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 207/692 (29%), Positives = 332/692 (47%), Gaps = 84/692 (12%)

Query: 23  TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE 82
           TFL NR I+ Y KC                           +C    LE A +LFDEMP+
Sbjct: 92  TFLLNRAIDTYGKC---------------------------RC----LEDAKELFDEMPQ 120

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
           R+  SWN +I A ++    EKALS +  M  +G     +T +S  +A   +L++   R+ 
Sbjct: 121 RDGGSWNAMIRACLQCVRPEKALSYFGDMHKQGVYANEVTFSSALRACGDVLELCLSRQI 180

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           HGL++K G   N+ V ++L+ +Y KCG    +  +F+E+  PN VT+  ++    +    
Sbjct: 181 HGLIVKYGFCGNVIVGSSLVDVYGKCGAMSESRRIFDEIENPNNVTWNIIVRRYLEVGDE 240

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            EA+ MF  M R  +   S + S+ L  C        SD+ A  +        G Q+H +
Sbjct: 241 NEAVVMFFKMFRAKLRPLSYTFSNALVAC--------SDMRAVKE--------GMQIHGV 284

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
             K+ FE +  + +SL+DMY K G+++SA  +F     R ++SW  M++ Y         
Sbjct: 285 ATKINFEEEEVVLSSLIDMYVKCGEIESARRVFDLPGSRDLISWTSMVSAYAM------- 337

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                       SG ++  RE+FD MP  ++ S+NA+L+ Y +S
Sbjct: 338 ----------------------------SGRMREARELFDEMPERNMVSYNALLAGYIRS 369

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
              +EA+     M       D  T  ++L+ C+ +  ++ GKQVH    +     +  + 
Sbjct: 370 LQWEEALDFVYLMCRTTENIDHITFQLMLNVCSGLSDVDMGKQVHGFIYRHGWLSNTVIG 429

Query: 443 SGLIGIYSKCQRNELAERVFHRIPE-LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
           + L+ +Y KC     A   FH++ +  D V WN ++   +   +  +A   F++M Q E 
Sbjct: 430 NALLDMYCKCGNLRSAGVWFHQMKQSRDSVSWNVLLTSYARRQMSEQAMSIFREM-QWET 488

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
            P +F FAT+L++CA   +  QG+Q+H  + ++GY  D  +  AL++MY KC  +  A  
Sbjct: 489 KPHKFIFATLLAACANTFALDQGKQIHGFMIRNGYDIDTVIAGALLDMYSKCRCLEYALI 548

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            F     ++ V WN MI G    G G  A+RL+  M   G KPD++TF  IL AC + G 
Sbjct: 549 VFREADKRDLVLWNSMILGCCHLGRGKLALRLFGFMEEEGTKPDNVTFQGILLACVYEGH 608

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           VD+  + FNSM   + + P L+HY C+I+ L R G   E E  I +MP      +   ++
Sbjct: 609 VDLARQYFNSMSSKYCIIPRLEHYECIIELLSRYGCMKELENFIKDMPFDPTAPMLTRVV 668

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
            +C+ H   RL + AA+ L  L P    P+ +
Sbjct: 669 DACKEHQCWRLGEWAAKRLDELSPSVPLPFEI 700



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 200/407 (49%), Gaps = 23/407 (5%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           +A   G  +H    +    ++  + + LI++Y KC    SA+ +FD    +D+ SW +++
Sbjct: 273 RAVKEGMQIHGVATKINFEEEEVVLSSLIDMYVKCGEIESARRVFDLPGSRDLISWTSMV 332

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           SA   S  +  A +LFDEMPERN+VS+N L++  +R+   E+AL     M        HI
Sbjct: 333 SAYAMSGRMREARELFDEMPERNMVSYNALLAGYIRSLQWEEALDFVYLMCRTTENIDHI 392

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T   +    + L DV+ G++ HG + + G   N  + NALL +Y KCG  + A   F +M
Sbjct: 393 TFQLMLNVCSGLSDVDMGKQVHGFIYRHGWLSNTVIGNALLDMYCKCGNLRSAGVWFHQM 452

Query: 182 SEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            +  + V++  +++  A+     +A+ +FR M +          +++L  CA        
Sbjct: 453 KQSRDSVSWNVLLTSYARRQMSEQAMSIFREM-QWETKPHKFIFATLLAACA-------- 503

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                  N F+ +  G+Q+H   I+ G++ D  ++ +LLDMY+K   ++ A ++F    +
Sbjct: 504 -------NTFALD-QGKQIHGFMIRNGYDIDTVIAGALLDMYSKCRCLEYALIVFREADK 555

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           R +V WN MI G     +   A+ L   M+  G +PD VT   +L+ACV  G +   R+ 
Sbjct: 556 RDLVLWNSMILGCCHLGRGKLALRLFGFMEEEGTKPDNVTFQGILLACVYEGHVDLARQY 615

Query: 361 FDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
           F+SM S     P +  +  ++   S+    KE     ++M F    P
Sbjct: 616 FNSMSSKYCIIPRLEHYECIIELLSRYGCMKELENFIKDMPFDPTAP 662



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 111/485 (22%), Positives = 202/485 (41%), Gaps = 115/485 (23%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + +H  I++ G   +  + + L+++Y KC     ++ +FD                    
Sbjct: 178 RQIHGLIVKYGFCGNVIVGSSLVDVYGKCGAMSESRRIFD-------------------- 217

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
                      E+   N V+WN ++   +  G E +A+ ++ KM      P   T ++  
Sbjct: 218 -----------EIENPNNVTWNIIVRRYLEVGDENEAVVMFFKMFRAKLRPLSYTFSNAL 266

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG------------------ 169
            A + +  V+ G + HG+  KI  ++   V ++L+ +Y KCG                  
Sbjct: 267 VACSDMRAVKEGMQIHGVATKINFEEEEVVLSSLIDMYVKCGEIESARRVFDLPGSRDLI 326

Query: 170 -WT------------KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
            WT            + A  +F+EM E N V++ A+++G  ++ +  EAL+   LM R  
Sbjct: 327 SWTSMVSAYAMSGRMREARELFDEMPERNMVSYNALLAGYIRSLQWEEALDFVYLMCRTT 386

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
            +ID ++   +L VC+    G+ SDV             G+QVH    + G+ ++  + N
Sbjct: 387 ENIDHITFQLMLNVCS----GL-SDV-----------DMGKQVHGFIYRHGWLSNTVIGN 430

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           +LLDMY K G++ SA V F  + + R  VSWNV++  Y ++  S +A+ + + M+    +
Sbjct: 431 ALLDMYCKCGNLRSAGVWFHQMKQSRDSVSWNVLLTSYARRQMSEQAMSIFREMQW-ETK 489

Query: 336 PDEVTSINMLVACVRSGDIKTGREM----------------------------------- 360
           P +     +L AC  +  +  G+++                                   
Sbjct: 490 PHKFIFATLLAACANTFALDQGKQIHGFMIRNGYDIDTVIAGALLDMYSKCRCLEYALIV 549

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F       +  WN+M+         K A++LF  M+  G KPD  T   IL +C   G +
Sbjct: 550 FREADKRDLVLWNSMILGCCHLGRGKLALRLFGFMEEEGTKPDNVTFQGILLACVYEGHV 609

Query: 421 ESGKQ 425
           +  +Q
Sbjct: 610 DLARQ 614


>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 913

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 195/626 (31%), Positives = 318/626 (50%), Gaps = 57/626 (9%)

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
           T  AV V      P+ V     + GL K+ R+ +AL++F  M RK V    V+ ++ +  
Sbjct: 55  TAAAVNVSHAAPPPDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNV----VAWTTAISG 110

Query: 231 CAREG--------------CGVESDVFAQSDNKFSRNVHG-----QQVHCLTIKLGFEAD 271
           C R G               GV  + FA +    +    G     +QVH L ++ GF AD
Sbjct: 111 CTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAAD 170

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
             + + L+++Y++ G + +AE +F  +    VV +  +++   +  +  +A+++L +M  
Sbjct: 171 AWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTR 230

Query: 332 CGFEPDEVTSINMLVACVRS-------------------------------GDIKTGREM 360
            G +P+E T  +ML  C R                                GD  T + +
Sbjct: 231 QGLQPNEHTMTSMLAECPRGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTV 290

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F+++ S +V SW +M+    +     +A+++F EM   GV+P+    +I LS+C ++ + 
Sbjct: 291 FENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVCL- 349

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
             G+Q+H +++K     D  V++ L+ +Y +       E V  +I   D+V W + I+  
Sbjct: 350 --GRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISAN 407

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
             N    +A     QM      P  ++F++ LSSCA L+   QGRQ+H    K G    +
Sbjct: 408 FQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKV 467

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
             G+ALI MY KCG I  AR  FD+M   + ++WN +IHG AQ+G  + A+  + +M +S
Sbjct: 468 CTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSS 527

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
             +PDD TF+++L  C+H+GLV  G   F  M   +G+ P   HY CMID LGR G F E
Sbjct: 528 DWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAE 587

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           A  +I+ MP + D +IW+ LL+SC+LH N+ + K AA++L  L  ++SA Y L++N+Y+ 
Sbjct: 588 ALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAM 647

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
              W D   VR  M E  + KD  +S
Sbjct: 648 HEEWRDAERVRRRMDEIGVKKDAGWS 673



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 155/624 (24%), Positives = 265/624 (42%), Gaps = 95/624 (15%)

Query: 39  THSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRN 98
           T +A ++    P  D+      L    KS  L  A  LFD MP +NVV+W   IS   RN
Sbjct: 55  TAAAVNVSHAAPPPDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRN 114

Query: 99  GLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVA 158
           G  E A +++  M   G  P      +   A  A   +  G + H L ++ G   + ++ 
Sbjct: 115 GRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIG 174

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           + L+ LY++CG  + A  VF  M  P+ V +T+++S L +   +  A+++   M R+ + 
Sbjct: 175 SCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQ 234

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            +  +++S+L  C R   G+                 G+Q+H   +K+     ++ S +L
Sbjct: 235 PNEHTMTSMLAECPR---GI-----------------GEQIHGYMLKVMGSQSVYASTAL 274

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +D Y++ GD  +A+ +F NL  ++VVSW  M+    +  +   A+ +   M S G +P+E
Sbjct: 275 IDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNE 334

Query: 339 VTSINMLVAC--------------------------------VRSGDIKTGREMFDSMPS 366
                 L AC                                 RSG +     +   + +
Sbjct: 335 FAFSIALSACGSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIEN 394

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           P + SW A +S+  Q+   ++A+ L  +M   G  P+    +  LSSCA + +L  G+Q+
Sbjct: 395 PDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQL 454

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H  +LK          + LI +YSKC R   A   F  +   D++ WNS+I GL+ +   
Sbjct: 455 HCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDA 514

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
             A   F +M  ++  P   +F +VL  C            HA + K+G           
Sbjct: 515 NLALETFSEMCSSDWRPDDSTFLSVLVGCN-----------HAGLVKEG----------- 552

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNE-----MIHGYAQNGYGDEAVRLYKDMIASG 601
                          FF  M  +  +T        MI    +NG   EA+R+ ++M    
Sbjct: 553 -------------ETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENM---P 596

Query: 602 VKPDDITFVAILTACSHSGLVDVG 625
            +PD + +  +L +C     +D+G
Sbjct: 597 FEPDVLIWKTLLASCKLHRNLDIG 620



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 205/432 (47%), Gaps = 28/432 (6%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
           ++   M  + +Y+  A++    +  D   A  +F+ +  +NVVSW +++   +R+G  + 
Sbjct: 258 YMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDD 317

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           AL V+++M +EG  P     +    A  +   V  GR+ H   IK  L  +I V+NALLS
Sbjct: 318 ALRVFSEMISEGVQPNEFAFSIALSACGS---VCLGRQIHCSAIKRDLMTDIRVSNALLS 374

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y + G+      V  ++  P+ V++TA +S   +     +A+ +   M  +  + +  +
Sbjct: 375 MYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYA 434

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
            SS L  CA                  +    G+Q+HCL +KLG +  +   N+L++MY+
Sbjct: 435 FSSGLSSCA----------------DLALLHQGRQLHCLALKLGCDFKVCTGNALINMYS 478

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K G + SA + F  +    V+SWN +I G  Q   +  A+E    M S  + PD+ T ++
Sbjct: 479 KCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLS 538

Query: 344 MLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           +LV C  +G +K G   F  M      +P+ S +  M+    ++    EA+++   M F 
Sbjct: 539 VLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPF- 597

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
             +PD      +L+SC     L+ GK + A  L   S  D+     +  +Y+  +    A
Sbjct: 598 --EPDVLIWKTLLASCKLHRNLDIGK-LAADKLMELSERDSASYVLMSNLYAMHEEWRDA 654

Query: 459 ERVFHRIPELDI 470
           ERV  R+ E+ +
Sbjct: 655 ERVRRRMDEIGV 666



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 224/534 (41%), Gaps = 102/534 (19%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H+  +R G   D ++ + LIELYS+C +  +A+ +F +M   D+  + +++SA C    
Sbjct: 158 VHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALC---- 213

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                                      RNG   +A+ V  +M+ +G  P   T+ S+   
Sbjct: 214 ---------------------------RNGELARAVDVLCQMTRQGLQPNEHTMTSMLAE 246

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
               +    G + HG ++K+   +++Y + AL+  Y++ G    A  VFE +   N V++
Sbjct: 247 CPRGI----GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSW 302

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
            +MM    +  R+ +AL +F  MI + V  +  + S  L  C                  
Sbjct: 303 CSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSV--------------- 347

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
                 G+Q+HC  IK     D+ +SN+LL MY ++G +   E +   +    +VSW   
Sbjct: 348 ----CLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAA 403

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------------- 349
           I+   Q   S KA+ LL +M S GF P++    + L +C                     
Sbjct: 404 ISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGC 463

Query: 350 ---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                          + G I + R  FD M +  V SWN+++   +Q  +   A++ F E
Sbjct: 464 DFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSE 523

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQV------HAASLKTASHIDNYVASGLIGI 448
           M     +PD +T   +L  C   G+++ G+              T SH      + +I +
Sbjct: 524 MCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHY-----ACMIDM 578

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-SLDIEAFMFFKQMRQNE 500
             +  R   A R+   +P E D++ W +++A   L+ +LDI      K M  +E
Sbjct: 579 LGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSE 632



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 11/121 (9%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH   L+ G        N LI +YSKC    SA+  FD M   D+ SWN+++    +
Sbjct: 451 GRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQ 510

Query: 67  SDDLEFAYKLFDEMPERNVVSW----NNLISALV---RNGLEEKALSVYNKMSNE-GFVP 118
             D   A + F EM   +   W    +  +S LV     GL ++  + + +M++  G  P
Sbjct: 511 HGDANLALETFSEMCSSD---WRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTP 567

Query: 119 T 119
           T
Sbjct: 568 T 568


>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 698

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 204/667 (30%), Positives = 324/667 (48%), Gaps = 71/667 (10%)

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYA-KCGWTKHAVPVF 178
           H+T+A+V K+             H  ++K G+       N LL+ Y+        A  +F
Sbjct: 13  HLTIAAVAKS-------------HATLLKSGVTSPT-PWNQLLTAYSVSSPGLAAARRLF 58

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           +E+   +  ++ ++++          A  + R M  + ++ ++ +L S L   A  GC  
Sbjct: 59  DEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAMHERGLAANTFALGSALRSAAAMGC-- 116

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                         +  G Q+H L +K G   ++  + +LL MYAK G    A  +F  +
Sbjct: 117 --------------SALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGM 162

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV------------ 346
           PER+ VSWN ++AGY +  +   A++L   M+  GF PDE T   +L             
Sbjct: 163 PERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVNDSTCFLMHQ 222

Query: 347 ----------------------ACVRSGDIKTGREMFDSMPSPS-VSSWNAMLSSYSQSE 383
                                 A  + G +   R +FD +   S + SWNAML +Y+   
Sbjct: 223 LHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHG 282

Query: 384 NHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
              EA++ F  M +  GV+PD  +   I+S+CA       G  +H    K       +V 
Sbjct: 283 MEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRD-HGGTVIHGLVSKNGFEGVTHVC 341

Query: 443 SGLIGIYSKCQRN---ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           + LI +Y++   N   E A + F  +   D V WNSM+ G S + L  +A  FF+ M+  
Sbjct: 342 NALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSE 401

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
            +   +++F+  L SC+ L+    GRQ+H  + + G+ ++ FV S+LI MY K G +  A
Sbjct: 402 NITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDA 461

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
            + F+     ++V WN M+ GYAQ+G       L+  M+   V  D ITFV ++TACSH+
Sbjct: 462 MKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHA 521

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           GLVD G EI N+M+  +G+   ++HY C ID  GRAG   +A+ LID MP + D ++W  
Sbjct: 522 GLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMT 581

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL +CR+H N+ LA   A  L   +P+  + Y LL+N+YS LG W D   V++ M    +
Sbjct: 582 LLGACRVHGNMELASDVASHLLEAEPRQHSTYVLLSNMYSGLGMWSDRAIVQKEMKNKGL 641

Query: 740 VKDPAYS 746
            K P +S
Sbjct: 642 SKVPGWS 648



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 138/551 (25%), Positives = 251/551 (45%), Gaps = 58/551 (10%)

Query: 57  WNAILSA-QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG 115
           WN +L+A    S  L  A +LFDE+P  +  SWN+L++A V  G    A  +   M   G
Sbjct: 37  WNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAMHERG 96

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
                  L S  +++ A+     G + H L +K GL  N++ A ALL +YAKCG T+ A 
Sbjct: 97  LAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDAC 156

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            +F+ M E N V++ A+++G  ++ +V  A+++F  M R+    D  + +++L V     
Sbjct: 157 RLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVNDST 216

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
           C +                   Q+H   +K G    L + N+ +  Y++ G + ++  IF
Sbjct: 217 CFLM-----------------HQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIF 259

Query: 296 SNLPERS-VVSWNVMIAGYGQKYQSTKAIELLQR-MKSCGFEPDEVTSINMLVACVRSGD 353
             + +RS ++SWN M+  Y       +A+      M++ G +PD  +  +++ AC    D
Sbjct: 260 DEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRD 319

Query: 354 -------------------------------------IKTGREMFDSMPSPSVSSWNAML 376
                                                ++   + FDS+      SWN+ML
Sbjct: 320 HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSML 379

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           + YSQ     +A++ FR MQ   +  D    +  L SC+ + +L  G+Q+H   +++   
Sbjct: 380 TGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFA 439

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            +N+V+S LI +YSK    + A + F    +   V WNSM+ G + +         F QM
Sbjct: 440 SNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQM 499

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE-KDGYVNDIFVGSALIEMYCKCGD 555
            + ++     +F  ++++C+      +G ++   +E + G    +   +  I++Y + G 
Sbjct: 500 LELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQ 559

Query: 556 IYGARQFFDMM 566
           +  A++  D M
Sbjct: 560 LDKAKELIDSM 570



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 131/551 (23%), Positives = 230/551 (41%), Gaps = 112/551 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH+  ++ GL D+ F    L+ +Y+KC  T  A  LFD MP ++  SWNA+++   +
Sbjct: 120 GTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVE 179

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S  +  A +LF EM ER                              EGF+P   T A  
Sbjct: 180 SGKVAPAVQLFVEM-ER------------------------------EGFLPDEATFA-- 206

Query: 127 FKASTALLDVEHGRRC------HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
                ALL V +   C      HG ++K G    + V NA ++ Y++CG   ++  +F+E
Sbjct: 207 -----ALLTVVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDE 261

Query: 181 MSEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGV 238
           + + ++ +++ AM+   A      EA+  F  M+R + V  D  S +S++  CA      
Sbjct: 262 IGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEH---- 317

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIF 295
                        R+  G  +H L  K GFE   H+ N+L+ MY +   N  M+ A   F
Sbjct: 318 -------------RDHGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCF 364

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
            +L  +  VSWN M+ GY Q   S  A+   + M+S     DE      L +C     ++
Sbjct: 365 DSLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLR 424

Query: 356 TGREM-----------------------------------FDSMPSPSVSSWNAMLSSYS 380
            GR++                                   F+     S   WN+M+  Y+
Sbjct: 425 LGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYA 484

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV---HAASLKTASHI 437
           Q    +    LF +M    V  D  T   ++++C+  G+++ G ++     +       +
Sbjct: 485 QHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRM 544

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-----SLDIEAFM 491
           ++Y     I +Y +  + + A+ +   +P E D + W +++    ++     + D+ + +
Sbjct: 545 EHYACG--IDLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVASHL 602

Query: 492 FFKQMRQNEMY 502
              + RQ+  Y
Sbjct: 603 LEAEPRQHSTY 613


>gi|302798965|ref|XP_002981242.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
 gi|300151296|gb|EFJ17943.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
          Length = 734

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 214/751 (28%), Positives = 356/751 (47%), Gaps = 97/751 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  + R+G  D ++L   ++++Y+KC                            C 
Sbjct: 33  GRRLHDDLRRSGYGDSSYLRRCVVQMYAKCG---------------------------CL 65

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +D    A   FDE+ ++N   WN +IS   R+G   +AL +++KM      P     AS 
Sbjct: 66  AD----AKAAFDEIADKNDFVWNLMISGYARSGKNREALELFHKMD---IPPNGFIFASA 118

Query: 127 FKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A   L D+E GR  H  V++   +  ++ V N+L+++YA+CG     + +F+ M   N
Sbjct: 119 LAACAGLGDLEQGREIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKN 178

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ AM+S   + D   +ALE++  M R+ +  +    +S+L  CA  G          
Sbjct: 179 LVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLG---------- 228

Query: 246 SDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                  N+  G  +H     LG + D+ + N+L++MY+K G MD A  +FS L  R V 
Sbjct: 229 -------NLELGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVF 281

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------- 349
           +W  MIAGY Q    ++A      M+     P   T + +L AC                
Sbjct: 282 TWTSMIAGYAQLGFGSEAFAFYDGMRRDCVSPTSATFVALLSACSTLEQGKHLHEEVKAF 341

Query: 350 -----------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                            R G ++    +F  M      SW+AM++S++Q  +  +A+ LF
Sbjct: 342 GFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLF 401

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID--NYVASGLIGIYS 450
           R+M   G++    T    L +C+        K +    L   S ID  + + + L+  YS
Sbjct: 402 RQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIR--ELIDWSGIDKMDSIRADLVSAYS 459

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   E A ++F R+   D++ W  MI G +       A   F +M+   + P   +F++
Sbjct: 460 KCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSS 519

Query: 511 VLSSCAKLSSSFQGRQVHAQI--EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           VL +C+ L     GR+VHA+I   + G ++D F+G+ LI MY +CG +  ARQ F+ M  
Sbjct: 520 VLQACSNLE---DGREVHARILAAQGGKMSD-FLGNGLINMYARCGSMRDARQIFESMDR 575

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            + ++W+ ++   A++G  D+ +  Y+ M+  GV PD +T +AIL +CSH+GL D     
Sbjct: 576 SSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHY 635

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F  +  D  +  + +HY CM+D L RAG   EAE LI  M  + D V    +L++C+   
Sbjct: 636 FTWIISDFELPHLDEHYQCMVDLLCRAGRLDEAEELI-SMIDRPDVVTLNTMLAACKNQQ 694

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           ++    R A ++ +     +AP+ LL+ IY+
Sbjct: 695 DLHRGARTAAQM-QSTESCAAPFVLLSQIYA 724



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/528 (27%), Positives = 254/528 (48%), Gaps = 71/528 (13%)

Query: 252 RNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
           RNV  G+++H    + G+    +L   ++ MYAK G +  A+  F  + +++   WN+MI
Sbjct: 28  RNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIADKNDFVWNLMI 87

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------- 360
           +GY +  ++ +A+EL  +M      P+     + L AC   GD++ GRE+          
Sbjct: 88  SGYARSGKNREALELFHKMD---IPPNGFIFASALAACAGLGDLEQGREIHKRVLESPSI 144

Query: 361 --------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
                                     FD+MP  ++ SWNAM+S++ Q +  ++A++L+  
Sbjct: 145 ASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALELYHR 204

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+   ++P+    A +L++CA++G LE G  +H          D  + + LI +YSKC  
Sbjct: 205 MKRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIVMENALINMYSKCGC 264

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A  VF  +   D+  W SMIAG +      EAF F+  MR++ + PT  +F  +LS+
Sbjct: 265 MDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGMRRDCVSPTSATFVALLSA 324

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C+ L    QG+ +H +++  G+ +   V +AL+ MY +CG +  A   F  M  K+ V+W
Sbjct: 325 CSTLE---QGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSW 381

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG----------LVD- 623
           + M+  +AQ G   +A+ L++ MI  G++    TF + L ACS             L+D 
Sbjct: 382 SAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDW 441

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G++  +S++ D            ++    + G   EA  + D M  + D + W V++  
Sbjct: 442 SGIDKMDSIRAD------------LVSAYSKCGDMEEARKIFDRMESR-DVLTWTVMIKG 488

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSL-LANIYSSLGRWDDLRAV 730
              +A    +K A E   R+ P+   P S+  +++  +    +D R V
Sbjct: 489 ---YAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSNLEDGREV 533



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 119/222 (53%), Gaps = 4/222 (1%)

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           A +L  C +   +  G+++H    ++     +Y+   ++ +Y+KC     A+  F  I +
Sbjct: 18  ARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIAD 77

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            +   WN MI+G + +  + EA   F +M   ++ P  F FA+ L++CA L    QGR++
Sbjct: 78  KNDFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQGREI 134

Query: 528 HAQI-EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
           H ++ E     +D+ V ++L+ MY +CG +    + FD M  KN V+WN MI  + Q  Y
Sbjct: 135 HKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDY 194

Query: 587 GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            ++A+ LY  M    ++P+   F ++LTAC+  G +++G  I
Sbjct: 195 PEQALELYHRMKRERLEPNGFVFASLLTACASLGNLELGSSI 236



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 21/247 (8%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +A +L  C    +  +GR++H  + + GY +  ++   +++MY KCG +  A+  FD + 
Sbjct: 17  YARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIA 76

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            KN   WN MI GYA++G   EA+ L+  M    + P+   F + L AC+  G ++ G E
Sbjct: 77  DKNDFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQGRE 133

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS---C 684
           I   +     +   +     ++    R G   E   + D MP + + V W  ++S+   C
Sbjct: 134 IHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMP-RKNLVSWNAMISAFVQC 192

Query: 685 RL-HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG----------RWDDLRAVREL 733
                 + L  R   E  RL+P N   ++ L    +SLG          R   L   R++
Sbjct: 193 DYPEQALELYHRMKRE--RLEP-NGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDI 249

Query: 734 MSENCIV 740
           + EN ++
Sbjct: 250 VMENALI 256


>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 622

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 175/520 (33%), Positives = 273/520 (52%), Gaps = 41/520 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G Q+HCL    G   D  +SNS++ MYAK  D++SA  +F  +P R  ++WN MI  Y Q
Sbjct: 85  GTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQ 144

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------------- 348
                +A+++L+     GF P      +M+  C                           
Sbjct: 145 NGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQ 204

Query: 349 -------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                         R GD    R +FD M   +  SW A++S  + ++++  A+  +REM
Sbjct: 205 HSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREM 264

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC-QR 454
           Q  GV P+R TL  +L++CA  G ++ GK++H  + +      +  +  LI +Y +C Q 
Sbjct: 265 QVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQS 324

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
             LAER+F      D+V W+S+I   +      +A   F +MR  E  P   +   V+S+
Sbjct: 325 LHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISA 384

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C  LSS   G  +H  I K G    IFV +ALI MY KCG +  +R+ F  M  +++VTW
Sbjct: 385 CTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTW 444

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI  Y  +GYG++A++ + +M   GVK D +TF+A+L+AC+H+GLV  G ++F  +  
Sbjct: 445 NSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNA 504

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           D  +   ++HY C+ID  GR+G   +A  ++  MP K    IW  L+SSC+LH  + +A+
Sbjct: 505 DCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAE 564

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
             + +L R +P N+A Y+LL+ I++  GRW D+  VRE M
Sbjct: 565 SLSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETM 604



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 239/476 (50%), Gaps = 64/476 (13%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N+I+S   K  D+E A ++FD MP R+ ++WN++I+A ++NGL  +AL +       GF+
Sbjct: 105 NSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFL 164

Query: 118 PTHITLASVFKASTALLDV--EHGRRCHGLVI---KIGLDKNIYVANALLSLYAKCGWTK 172
           P    LAS+       +D+    GR+ HGLV+   +I +  +++++ A +  Y +CG + 
Sbjct: 165 PKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSL 224

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF+EM   NEV++TA++SG A       AL  +R M  + VS + V+L ++L  CA
Sbjct: 225 MARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACA 284

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD-MDSA 291
           R G       F +         +G+++H    + GF++    S +L+ +Y + G  +  A
Sbjct: 285 RPG-------FVK---------YGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLA 328

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-- 349
           E IF     R VV W+ +I  Y ++ +S KA++L  +M++   EP+ VT + ++ AC   
Sbjct: 329 ERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNL 388

Query: 350 ---------------------------------RSGDIKTGREMFDSMPSPSVSSWNAML 376
                                            + G +   R++F  MPS    +WN+M+
Sbjct: 389 SSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMI 448

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA---ASLKT 433
           S+Y      ++A++ F EM+ RGVK D  T   +LS+C   G++  G+Q+     A  + 
Sbjct: 449 SAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEI 508

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS-LDI 487
              I++Y    LI ++ +  + E A  +   +P +     W+S+++   L+  LDI
Sbjct: 509 PITIEHYAC--LIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDI 562



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 138/563 (24%), Positives = 249/563 (44%), Gaps = 53/563 (9%)

Query: 92  ISALVRNGLEEKALSVYNKM--SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI 149
           I  LV  GL  + L  + ++  S   F      L SV KA +       G + H L    
Sbjct: 36  IKTLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFIT 95

Query: 150 GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
           G   +  V+N+++S+YAK    + A  VF+ M   + +T+ +M++   +   +VEAL+M 
Sbjct: 96  GSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQML 155

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
           +             L+S++ +C RE              +  R +HG  V  +  ++  +
Sbjct: 156 KDFYFLGFLPKPELLASMVSMCGRE---------MDLGWRIGRQIHGLVV--VDGRIRIQ 204

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
             + LS + +D Y + GD   A  +F  +  ++ VSW  +I+G         A+   + M
Sbjct: 205 HSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREM 264

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREM--------FDSMPSPS------------- 368
           +  G  P+ VT I +L AC R G +K G+E+        FDS  S S             
Sbjct: 265 QVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQS 324

Query: 369 ---------------VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
                          V  W++++ SY++     +A+KLF +M+    +P+  TL  ++S+
Sbjct: 325 LHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISA 384

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           C  +   + G  +H   LK       +V + LI +Y+KC   + + ++F  +P  D V W
Sbjct: 385 CTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTW 444

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           NSMI+   L+    +A   F +M++  +     +F  VLS+C       +G+Q+  Q+  
Sbjct: 445 NSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNA 504

Query: 534 DGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAV 591
           D  +   I   + LI+++ + G +  A +    M  K +   W+ ++     +G  D A 
Sbjct: 505 DCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAE 564

Query: 592 RLYKDMIASGVKPDDITFVAILT 614
            L   +I S  +P++     +L+
Sbjct: 565 SLSSQLIRS--EPNNAASYTLLS 585



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 182/374 (48%), Gaps = 25/374 (6%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           +  D   A  +FDEM  +N VSW  +IS    N   + AL+ Y +M  EG  P  +TL +
Sbjct: 219 RCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIA 278

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH-AVPVFEEMSEP 184
           +  A      V++G+  HG   + G D     + AL+ LY +CG + H A  +FE  S  
Sbjct: 279 LLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLR 338

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V +++++   A+     +AL++F  M  +    + V+L +V+  C             
Sbjct: 339 DVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISAC------------- 385

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 S   HG  +H   +K G    + + N+L++MYAK G +D +  IF  +P R  V
Sbjct: 386 ---TNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSV 442

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           +WN MI+ YG      +A++    MK  G + D VT + +L AC  +G +  G+++F+ +
Sbjct: 443 TWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQV 502

Query: 365 PSP-----SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
            +      ++  +  ++  + +S   ++A+++ R M    +KP     + ++SSC   G 
Sbjct: 503 NADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMP---MKPSARIWSSLVSSCKLHGR 559

Query: 420 LESGKQVHAASLKT 433
           L+  + + +  +++
Sbjct: 560 LDIAESLSSQLIRS 573



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 150/314 (47%), Gaps = 24/314 (7%)

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAI--ILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
           + + ++ F ++ F     +     +  ++ +C+       G Q+H  +  T S+ D  V+
Sbjct: 45  YHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVS 104

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + +I +Y+K    E A +VF  +P  D + WNSMI     N L +EA    K        
Sbjct: 105 NSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFL 164

Query: 503 PTQFSFATVLSSCAK-LSSSFQ-GRQVHAQIEKDGYV---NDIFVGSALIEMYCKCGDIY 557
           P     A+++S C + +   ++ GRQ+H  +  DG +   + +F+ +A ++ Y +CGD  
Sbjct: 165 PKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSL 224

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            AR  FD M  KN V+W  +I G A N   D A+  Y++M   GV P+ +T +A+L AC+
Sbjct: 225 MARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACA 284

Query: 618 HSGLVDVGVEI--------FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
             G V  G EI        F+S    H   P L +  C  +C G++ H  E    I E  
Sbjct: 285 RPGFVKYGKEIHGYAFRRGFDSC---HSFSPALIYLYC--EC-GQSLHLAER---IFEGS 335

Query: 670 CKDDPVIWEVLLSS 683
              D V+W  ++ S
Sbjct: 336 SLRDVVLWSSIIGS 349



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 17/208 (8%)

Query: 488 EAFMFFKQMR--QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
           +   FF Q+    +      F   +V+ +C+       G Q+H      G   D  V ++
Sbjct: 47  QTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNS 106

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           +I MY K  DI  ARQ FD M  ++T+TWN MI+ Y QNG   EA+++ KD    G  P 
Sbjct: 107 IISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPK 166

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI-----LDH----YTCMIDCLGRAG 656
                ++++ C     +D+G  I   +   HG+  +     + H     T  +D   R G
Sbjct: 167 PELLASMVSMCGRE--MDLGWRIGRQI---HGLVVVDGRIRIQHSVFLSTAFVDFYFRCG 221

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
               A  + DEM  K++ V W  ++S C
Sbjct: 222 DSLMARSVFDEMEVKNE-VSWTAVISGC 248



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 75/138 (54%), Gaps = 11/138 (7%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G ++H +IL+ G+    F+CN LI +Y+KC +   ++ +F +MP +D  +WN+++SA   
Sbjct: 394 GGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGL 453

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
               E A + F EM ER V    V++  ++SA    GL  +   ++ +++ +  +P  I 
Sbjct: 454 HGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITI- 512

Query: 123 LASVFKASTALLDVEHGR 140
                +    L+D+ HGR
Sbjct: 513 -----EHYACLIDL-HGR 524


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 171/514 (33%), Positives = 270/514 (52%), Gaps = 70/514 (13%)

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
            + D+   N+LL  YAK+G + + +  F  +P R  VS+N  IAG+       +++EL +
Sbjct: 85  LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGRE---------------------------- 359
           RM+  GFEP E T +++L A  +  D++ G++                            
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204

Query: 360 -------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
                  +FD +   ++ SWN M+S Y+++   ++ I L  +M+  G  PD+ T++ I++
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA 264

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +                                   Y +C R + A RVF    E DIVC
Sbjct: 265 A-----------------------------------YCQCGRVDEARRVFSEFKEKDIVC 289

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           W +M+ G + N  + +A + F +M    + P  ++ ++V+SSCAKL+S   G+ VH +  
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSI 349

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVR 592
             G  N++ V SALI+MY KCG I  AR  F++M  +N V+WN MI G AQNG+  +A+ 
Sbjct: 350 LAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALE 409

Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
           L+++M+    KPD++TF+ IL+AC H   ++ G E F+S+   HG+ P LDHY CM++ L
Sbjct: 410 LFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLL 469

Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYS 712
           GR G   +A  LI  M    D +IW  LLS C    ++  A+ AA  LF LDP  + PY 
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYI 529

Query: 713 LLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +L+N+Y+S+GRW D+ +VR LM    + K   +S
Sbjct: 530 MLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFS 563



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/471 (30%), Positives = 235/471 (49%), Gaps = 65/471 (13%)

Query: 7   GKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
            K L +H + + LF   D+FL N+L+ LY+K      AQ+LFDKM  +DI+SWNA+LSA 
Sbjct: 41  AKRLQSH-MEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAY 99

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            KS  ++     FD MP R+ VS+N  I+    N   +++L ++ +M  EGF PT  T+ 
Sbjct: 100 AKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIV 159

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  AS  L D+ +G++ HG +I      N+++ NAL  +YAKCG  + A  +F+ +++ 
Sbjct: 160 SILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKK 219

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG------- 237
           N V++  M+SG AK  +  + + +   M       D V++S+++    +  CG       
Sbjct: 220 NLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQ--CGRVDEARR 277

Query: 238 ----------------------------------------VESDVFAQSD-----NKFSR 252
                                                   +E D +  S       K + 
Sbjct: 278 VFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLAS 337

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
             HGQ VH  +I  G   +L +S++L+DMY+K G +D A  +F+ +P R+VVSWN MI G
Sbjct: 338 LHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVG 397

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SP 367
             Q      A+EL + M    F+PD VT I +L AC+    I+ G+E FDS+      +P
Sbjct: 398 CAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTP 457

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           ++  +  M++   ++   ++A+ L + M      PD    + +LS C+  G
Sbjct: 458 TLDHYACMVNLLGRTGRIEQAVALIKNMAH---DPDFLIWSTLLSICSTKG 505



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 156/578 (26%), Positives = 274/578 (47%), Gaps = 71/578 (12%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPT----HITLASVFKASTALLDVEHGRRC 142
           ++  L+   VR     +A  + + M +  F PT    H  L  ++     L D ++    
Sbjct: 24  AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQN---- 79

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
             L  K+ L ++I+  NALLS YAK G  ++    F+ M   + V++   ++G +     
Sbjct: 80  --LFDKM-LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCP 136

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            E+LE+F+ M R+       ++ S+L   A+            SD ++     G+Q+H  
Sbjct: 137 QESLELFKRMQREGFEPTEYTIVSILNASAQ-----------LSDLRY-----GKQIHGS 180

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            I   F  ++ + N+L DMYAK G+++ A  +F  L ++++VSWN+MI+GY +  Q  K 
Sbjct: 181 IIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKC 240

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
           I LL +M+  G  PD+VT   ++ A  + G +   R +F       +  W AM+  Y+++
Sbjct: 241 IGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKN 300

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
              ++A+ LF EM    ++PD  TL+ ++SSCA +  L  G+ VH  S+    + +  V+
Sbjct: 301 GREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVS 360

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           S LI +YSKC   + A  VF+ +P  ++V WN+MI G + N  D +A   F+ M Q +  
Sbjct: 361 SALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFK 420

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +F  +LS+C           +H                        C  I   +++
Sbjct: 421 PDNVTFIGILSAC-----------LH------------------------CNWIEQGQEY 445

Query: 563 FDMMHGKNTVT-----WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
           FD +  ++ +T     +  M++   + G  ++AV L K+M      PD + +  +L+ CS
Sbjct: 446 FDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNM---AHDPDFLIWSTLLSICS 502

Query: 618 HSG-LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
             G +V+  V   +  +LD  +       + M   +GR
Sbjct: 503 TKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGR 540



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 177/367 (48%), Gaps = 14/367 (3%)

Query: 387 EAIKLFREMQFRGVKPDRTTL-AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +A +L   M+    +P  + L   +L   A  G L   + +    LK     D +  + L
Sbjct: 40  QAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKR----DIFSWNAL 95

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           +  Y+K    +  +  F R+P  D V +N+ IAG S NS   E+   FK+M++    PT+
Sbjct: 96  LSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTE 155

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           ++  ++L++ A+LS    G+Q+H  I    ++ ++F+ +AL +MY KCG+I  AR  FD 
Sbjct: 156 YTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDC 215

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  KN V+WN MI GYA+NG  ++ + L   M  SG  PD +T   I+ A    G VD  
Sbjct: 216 LTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEA 275

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM---PCKDDPVIWEVLLS 682
             +F+  +     E  +  +T M+    + G   +A +L +EM     + D      ++S
Sbjct: 276 RRVFSEFK-----EKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVS 330

Query: 683 SCRLHANVRLAKRA-AEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           SC   A++   +    + +      N    S L ++YS  G  DD R+V  LM    +V 
Sbjct: 331 SCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVS 390

Query: 742 DPAYSLG 748
             A  +G
Sbjct: 391 WNAMIVG 397



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 157/346 (45%), Gaps = 52/346 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN-------- 58
           GK +H  I+      + F+ N L ++Y+KC     A+ LFD +  K++ SWN        
Sbjct: 174 GKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAK 233

Query: 59  ---------------------------AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
                                       I++A C+   ++ A ++F E  E+++V W  +
Sbjct: 234 NGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAM 293

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           +    +NG EE AL ++N+M  E   P   TL+SV  +   L  + HG+  HG  I  GL
Sbjct: 294 MVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           + N+ V++AL+ +Y+KCG+   A  VF  M   N V++ AM+ G A+     +ALE+F  
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413

Query: 212 MIRKAVSIDSVSLSSVLGVCA-----------------REGCGVESDVFAQSDNKFSRNV 254
           M+++    D+V+   +L  C                  + G     D +A   N   R  
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTG 473

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
             +Q   L   +  + D  + ++LL + +  GD+ +AEV   +L E
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFE 519



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/281 (20%), Positives = 115/281 (40%), Gaps = 41/281 (14%)

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY-VNDIFVGSALIEMYCKCGDIYGARQF 562
           T  ++  ++  C + +   Q +++ + +E   +   D F+ + L+ +Y K G +  A+  
Sbjct: 21  TSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNL 80

Query: 563 FDMMHGKNTVTWNEMIHGYAQNG-------------YGD------------------EAV 591
           FD M  ++  +WN ++  YA++G             + D                  E++
Sbjct: 81  FDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESL 140

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
            L+K M   G +P + T V+IL A +    +  G +I  S+ + + +  +   +  + D 
Sbjct: 141 ELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFI-WNALTDM 199

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP- 710
             + G   +A  L D +  K + V W +++S    +A     ++    L ++      P 
Sbjct: 200 YAKCGEIEQARWLFDCLT-KKNLVSWNLMISG---YAKNGQPEKCIGLLHQMRLSGHMPD 255

Query: 711 ---YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSLG 748
               S +   Y   GR D+ R V     E  IV   A  +G
Sbjct: 256 QVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVG 296


>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Vitis vinifera]
          Length = 724

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 193/619 (31%), Positives = 312/619 (50%), Gaps = 45/619 (7%)

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
           K G ++ +Y+  A L  Y K G   +A  +FEEM   + V++ A++ G ++     +ALE
Sbjct: 81  KSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALE 140

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +F  M+R+       +L  ++  C R       D+  Q          G+ +H   IK G
Sbjct: 141 VFVQMLREGFPPCQRTLVGLVPSCGR------PDIIFQ----------GKAIHGFGIKSG 184

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
            + D  + N+L  MYAK  D+ +AEV+F  + E++ VSWN MI  YGQ     +A+ + +
Sbjct: 185 LDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFK 244

Query: 328 RMKSCGFEPDEVTSINMLVA---------------------------CVRSG--DIKTGR 358
           +M+    E + VT I++L A                           C  +G  +I++  
Sbjct: 245 QMQKERVEVNYVTIISLLSANAHLDSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAG 304

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            +++ MP  ++ S  AM+S Y++  N    ++ F +M    +KPD   +  IL       
Sbjct: 305 LLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPT 364

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            + SG  +HA  LKT    D  V +GLI +YSK    E    +F  + E  ++ WNS+I+
Sbjct: 365 FIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVIS 424

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
                    +A   F QMR     P   + A++L+ C+++     G ++H  + ++    
Sbjct: 425 ACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDM 484

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           + F+ +AL++MY KCG +  A + F  +      TWN MI GY  +G+   A+  Y +M 
Sbjct: 485 EDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQ 544

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
             G+KPD ITF+ +L+AC+H GLV  G   F SM+ D G+ P L H  CM+D L RAG  
Sbjct: 545 EQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFL 604

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
            EA + +  M  + D  IW  LL+SC +H  ++L +  A+ L  LD  +   Y L++N+Y
Sbjct: 605 EEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLY 664

Query: 719 SSLGRWDDLRAVRELMSEN 737
           +S GRWDD+  VR++M + 
Sbjct: 665 ASKGRWDDVARVRKMMKDT 683



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 174/625 (27%), Positives = 293/625 (46%), Gaps = 90/625 (14%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
            R ++  +K        HL     ++ +Y   A L    K   + +A  LF+EMP R+VV
Sbjct: 61  TRALDANTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVV 120

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SWN LI    RNG +  AL V+ +M  EGF P   TL  +  +      +  G+  HG  
Sbjct: 121 SWNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFG 180

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           IK GLD +  V NAL S+YAKC   + A  +FEE+ E  EV++  M+    +     EA+
Sbjct: 181 IKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAM 240

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            +F+ M ++ V ++ V++ S+L                      S N H    HC  IK 
Sbjct: 241 LVFKQMQKERVEVNYVTIISLL----------------------SANAHLDSTHCYVIKT 278

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           GF  D  +  SL+  YA  G+++SA ++++ +P+R++VS   MI+GY +K      +E  
Sbjct: 279 GFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECF 338

Query: 327 QRMKSCGFEPDEVTSINML-------------------------VACV----------RS 351
            +M     +PD V  +++L                           C+          + 
Sbjct: 339 TQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKF 398

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           GDI+T   +F  M    + SWN+++S+  Q     +A++LF +M+  G  PD  T+A +L
Sbjct: 399 GDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLL 458

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
           + C+ +G L+ G+++H   L+    +++++ + L+ +Y KC R E AERVF  I E  + 
Sbjct: 459 AGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLA 518

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI 531
            WN+MI+G  L+  +  A   + +M++  + P + +F  VLS+C      ++G++    +
Sbjct: 519 TWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSM 578

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAV 591
            +D                            F M+ G        M+   ++ G+ +EAV
Sbjct: 579 RED----------------------------FGMIPGLQHNAC--MVDLLSRAGFLEEAV 608

Query: 592 RLYKDMIASGVKPDDITFVAILTAC 616
              K+M    V+PD   + A+LT+C
Sbjct: 609 IFVKNM---EVEPDSAIWGALLTSC 630



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 212/454 (46%), Gaps = 88/454 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   +++GL  D  + N L  +Y+KC +  +A+ LF+++  K   SWN        
Sbjct: 173 GKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWN-------- 224

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I A  +NGL ++A+ V+ +M  E     ++T+ S+
Sbjct: 225 -----------------------TMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISL 261

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A+ A LD  H   C+  VIK G   +  V  +L+  YA CG  + A  ++  M + N 
Sbjct: 262 LSAN-AHLDSTH---CY--VIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNL 315

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+ TAM+SG A+   +   +E F  M++  +  D+V++ S+L        G     F  S
Sbjct: 316 VSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILH-------GFTDPTFIGS 368

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G  +H   +K G  AD  + N L+ MY+K GD+++   +FS + E+ ++SW
Sbjct: 369 ---------GLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISW 419

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           N +I+   Q  +++ A+EL  +M+  G  PD +T  ++L  C                  
Sbjct: 420 NSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLR 479

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                            ++ G +++   +F S+  P +++WN M+S Y  S +   A+  
Sbjct: 480 NNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSC 539

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           + EMQ +G+KPDR T   +LS+C   G++  GK+
Sbjct: 540 YSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKR 573



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 51/309 (16%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G  +HA+ L+ GL  D  + N LI +YSK  +  +   LF +M  K + SWN++     
Sbjct: 368 SGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSV----- 422

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                     ISA ++ G    A+ ++ +M   G  P  IT+AS
Sbjct: 423 --------------------------ISACIQVGRTSDAMELFCQMRMYGHSPDAITIAS 456

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +    + +  ++ G R H  V++  LD   ++  AL+ +Y KCG  + A  VF+ + EP 
Sbjct: 457 LLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPC 516

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             T+  M+SG   +     AL  +  M  + +  D ++   VL  C   G   E   + +
Sbjct: 517 LATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFR 576

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL---PERS 302
           S  +                 G    L  +  ++D+ ++ G ++ A +   N+   P+ +
Sbjct: 577 SMRE---------------DFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSA 621

Query: 303 VVSWNVMIA 311
           +  W  ++ 
Sbjct: 622 I--WGALLT 628



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 81/165 (49%), Gaps = 2/165 (1%)

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           ++  +  Q+   + K G+   +++ +A ++ Y K G IY A+  F+ M  ++ V+WN +I
Sbjct: 67  NTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALI 126

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GY++NGY  +A+ ++  M+  G  P   T V ++ +C    ++  G  I +   +  G+
Sbjct: 127 CGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAI-HGFGIKSGL 185

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           +        +     +      AE+L +E+  K + V W  ++ +
Sbjct: 186 DLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTE-VSWNTMIGA 229


>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
 gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
          Length = 733

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 212/741 (28%), Positives = 359/741 (48%), Gaps = 66/741 (8%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           HA I+  G  ++ F+ ++LI LY+     HS+ ++FD    KD +               
Sbjct: 52  HALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFL-------------- 97

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
                            WN++I +   NG   KA   Y +M  +   P   T+  +    
Sbjct: 98  -----------------WNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATC 140

Query: 131 TALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
             LL +E G+  HGLV K GL  +N  V ++ + +YAKCG  + A  +F+E+   + V++
Sbjct: 141 AELLWLEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSW 200

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           TA++ G    D   + LE    M R     + V+  ++ G    + CG            
Sbjct: 201 TALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEG--GFQACG-----------N 247

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
               + G+ +H L +K G      + +SLL MY+K G+++ A   F  + ++ V SW  +
Sbjct: 248 LGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSV 307

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSV 369
           I    +     + + L   M+     PD +    +L+    S  ++ G+     +   + 
Sbjct: 308 IGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNY 367

Query: 370 ----SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
               +  NA+LS Y +      A KLF  +     K    T+                  
Sbjct: 368 VLDDTVNNALLSMYCKFGTLNPAEKLFDGVH-EWSKESWNTMVF--------------GY 412

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           VH   +K +   D  +A+ LI +Y K     +A ++F R  + D+V WN++I+  + +  
Sbjct: 413 VHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCR-TQRDVVTWNTLISSYTHSGH 471

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             EA   F +M   ++ P   +   VLS+C  L S  +G+ VH  I++ G+  ++ +G+A
Sbjct: 472 YAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTA 531

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           L++MY KCG +  +R+ F+ M  K+ ++WN MI GY  +G  + A+ +++ M  S VKP+
Sbjct: 532 LVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPN 591

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            ITF+++L+AC+H+G VD G ++F+ MQ  + ++P L H+ CM D LGR+G+  EAE L+
Sbjct: 592 AITFLSLLSACTHAGYVDEGKQLFDRMQY-YSIKPNLKHFACMADLLGRSGNLQEAEDLV 650

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
             MP   D  +W  LLS+C++H  + +  R A+     DP+N   Y +L+N+Y S+G+WD
Sbjct: 651 QSMPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIMLSNMYGSMGKWD 710

Query: 726 DLRAVRELMSENCIVKDPAYS 746
           +    RELM E  I K   +S
Sbjct: 711 EAERARELMKERGIGKRAGWS 731



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 232/498 (46%), Gaps = 53/498 (10%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A +AG+ LH   ++ GL     + + L+ +YSKC N   A + F ++  KD++SW +++ 
Sbjct: 250 AMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIG 309

Query: 63  AQCKSDDLEFAYKLFDEM------PERNVVS-----WNNLISALVRNGLEEKAL-----S 106
              +   +     LF +M      P+  VVS     + N  S +VR G     L      
Sbjct: 310 VCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGN--SMMVREGKAFHGLIVRRNY 367

Query: 107 VYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR----------CHGLVIKIGLDKNIY 156
           V +   N   +  +    ++  A      V    +           H  +IK  +D+++ 
Sbjct: 368 VLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVS 427

Query: 157 VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
           +AN+L+ +Y K G    A  +F   ++ + VT+  ++S    +    EA+ +F  MI + 
Sbjct: 428 IANSLIDMYGKGGNLSIAWKMFCR-TQRDVVTWNTLISSYTHSGHYAEAITLFDEMISEK 486

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           ++ +S +L  VL  C    C + S               G+ VH    + GFE ++ L  
Sbjct: 487 LNPNSATLVIVLSAC----CHLPSL------------EKGKMVHQYIKEGGFELNVSLGT 530

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+DMYAK G ++ +  +F+++ E+ V+SWNVMI+GYG    +  A+E+ Q+M+    +P
Sbjct: 531 ALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKP 590

Query: 337 DEVTSINMLVACVRSGDIKTGREMFDSMP----SPSVSSWNAMLSSYSQSENHKEAIKLF 392
           + +T +++L AC  +G +  G+++FD M      P++  +  M     +S N +EA  L 
Sbjct: 591 NAITFLSLLSACTHAGYVDEGKQLFDRMQYYSIKPNLKHFACMADLLGRSGNLQEAEDLV 650

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           + M    + PD      +LS+C     +E G +V   ++++    D Y    L  +Y   
Sbjct: 651 QSMP---ICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIM-LSNMYGSM 706

Query: 453 QRNELAERVFHRIPELDI 470
            + + AER    + E  I
Sbjct: 707 GKWDEAERARELMKERGI 724



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 4/210 (1%)

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L+S  + HA  + T +  + +++S LI +Y+  ++   +  VF    + D   WNS+I  
Sbjct: 45  LQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKS 104

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG-YVN 538
              N    +AF F+ QMR +   P QF+   ++++CA+L    +G+ +H  + K G +  
Sbjct: 105 HFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAE 164

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           +  VGS+ + MY KCG +  A   FD +  ++ V+W  ++ GY  N   ++ +    +M 
Sbjct: 165 NSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMR 224

Query: 599 ---ASGVKPDDITFVAILTACSHSGLVDVG 625
                G K +  T      AC + G +  G
Sbjct: 225 RIGGDGEKVNSRTLEGGFQACGNLGAMIAG 254


>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
          Length = 671

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 192/652 (29%), Positives = 338/652 (51%), Gaps = 63/652 (9%)

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
           H R  HG  +K+G   + Y+ N LL  Y   G    A  VF+EM   N V+++ ++   +
Sbjct: 20  HPRAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASS 79

Query: 198 KTDRVVEALEMFRLMIRKAVS--IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
           +   + +AL +F  M+R       +S ++++++  CAR                    V 
Sbjct: 80  RLGVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARA----------------KDAVA 123

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA---G 312
           G+QVH   +KLG + D  ++ +L+DMYAK G + S+   F   P+RSV+SW  MIA    
Sbjct: 124 GEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVN 183

Query: 313 YGQKYQSTKAIELLQRMK-----------SCGFE----PDEVTSINMLVACVRSGDIKTG 357
           +G       AI L ++M            SC  +    P+ + S   +  C+    +K G
Sbjct: 184 HGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCL----VKMG 239

Query: 358 REMFDSMPSPSVS-----------------------SWNAMLSSYSQSENHKEAIKLFRE 394
            E+  ++ +  ++                       S  ++L++Y+++  + EA+++FR+
Sbjct: 240 TEVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRD 299

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M    +  D++ +  +L  C+++G L   K++H  +LK    +D  + + ++ +Y KC  
Sbjct: 300 MLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGD 359

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              +E VF+ +   D + W +++     N L  EA  FF++M +  +  + F   +VL +
Sbjct: 360 IASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRA 419

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C+  SS   G Q+H+++ K G  +D  V +AL+ MY KCG +  A + F+    +  ++W
Sbjct: 420 CSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISW 479

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I  ++Q+G    A++L+  M    V PDD TFV +L++CS  GLV  G E F  M+ 
Sbjct: 480 NALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKT 539

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
            + +EP ++HYTCM+D   RAG F +A   ID MPC+ D ++WE LL+SCR+H N+ L +
Sbjct: 540 KYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGR 599

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA+++  + P++ +PY +L++I++S+  WD+    R L+    + KD   S
Sbjct: 600 MAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLLDFQQLRKDVGSS 651



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 140/652 (21%), Positives = 282/652 (43%), Gaps = 88/652 (13%)

Query: 4   HVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           H   + +H   ++ G    T+LCN L+  Y    +   A+ +FD+MP +++ SW+ ++ A
Sbjct: 18  HSHPRAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVA 77

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
             +   L  A  LF               + ++R G  ++              P   T+
Sbjct: 78  SSRLGVLGDALSLF---------------AGMLRGGERDR--------------PNSFTV 108

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           A++        D   G + H   +K+G+D++  VA  L+ +YAKCG    +   F    +
Sbjct: 109 AALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQ 168

Query: 184 PNEVTFTAMMSGL---AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            + +++T+M++ L     +     A+ +F+ M+   V   + + S +L            
Sbjct: 169 RSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCIL------------ 216

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
            VF   +   S    G+QVH   +K+G E D  L  +LL MY + G MD    +   +  
Sbjct: 217 KVFDVPELLPS----GKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-R 271

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------- 349
               S   ++  Y +   + +A+ + + M       D+    ++L  C            
Sbjct: 272 HDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEI 331

Query: 350 ------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   + GDI +   +F+++ +    SW A+L+ Y Q++  
Sbjct: 332 HCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLS 391

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +EA+  FREM  +G++     +  +L +C+A   L  G Q+H+  +K     D  V + L
Sbjct: 392 QEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENAL 451

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC   ++A ++F+      I+ WN++I   S +  ++ A   F  M++  + P  
Sbjct: 452 VTMYAKCGVVQVALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDD 511

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIE-KDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           ++F  +LSSC+++    +G +   Q++ K      +   + +++++ + G    A +F D
Sbjct: 512 YTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFID 571

Query: 565 MMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
            M  + + + W  ++     +G  D      K ++   +KP+D +   IL++
Sbjct: 572 AMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILE--IKPEDPSPYIILSS 621



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 131/594 (22%), Positives = 265/594 (44%), Gaps = 103/594 (17%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K  VAG+ +HA  ++ G+ +D  +   L+++Y+KC    S+   F   P + + SW +++
Sbjct: 119 KDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMI 178

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +      D                            +G  + A+ ++ KM      PT+ 
Sbjct: 179 ACLVNHGD----------------------------SGYRDTAIVLFKKMLVLKVWPTNA 210

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T + + K       +  G++ HG ++K+G + +  +  ALL++Y +CG       +   +
Sbjct: 211 TFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI 270

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              +  + T++++  A+    +EA+ +FR M+   + ID  +++S+L VC+  G   +  
Sbjct: 271 RH-DAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLG---QLR 326

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
           V              +++HC  +K  F  D  L N+++ +Y K GD+ S+E++F+ L  +
Sbjct: 327 VV-------------KEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENK 373

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
             +SW  ++  Y Q   S +A+   + M   G E       ++L AC             
Sbjct: 374 DTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIH 433

Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  + G ++   ++F+S  +  + SWNA+++S+SQ  N  
Sbjct: 434 SRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSFSQHGNEV 493

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SG 444
            AI+LF  MQ   V PD  T   +LSSC+ MG++  G + +   +KT  +++  +   + 
Sbjct: 494 AAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCE-YFKQMKTKYNLEPKMEHYTC 552

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-SLDIEAFMFFKQMRQNEMY 502
           ++ ++++  R   A +    +P + D + W +++A   ++ +LD+      K +   E+ 
Sbjct: 553 MVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKIL---EIK 609

Query: 503 PTQFSFATVLSSC----------AKLSSSFQGRQVH-----AQIEKDGYVNDIF 541
           P   S   +LSS           A+  +    +Q+      +Q++  G+ +DIF
Sbjct: 610 PEDPSPYIILSSIHASIDMWDEKARNRTLLDFQQLRKDVGSSQLDSQGFSDDIF 663


>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 185/628 (29%), Positives = 314/628 (50%), Gaps = 54/628 (8%)

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
           ++   L++ Y+  G  ++A  VF+E+ +P  V   AM++G  + +R  + +E+ ++M R 
Sbjct: 90  FLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRC 149

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHL 274
            +  DS + +  L  C                  F  +   G +V  L +  G      L
Sbjct: 150 HLEFDSYTCNFALKACM-----------------FLLDYEMGMEVIGLAVCKGLAGGRFL 192

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
            +S+L+   K GD+  A+  F  + E+ VV WNVMI G+ Q+    +   L   M     
Sbjct: 193 GSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKI 252

Query: 335 EPDEVTSINMLVAC-----------------------------------VRSGDIKTGRE 359
           EP  VT I+++ +C                                    +SGD+++ R 
Sbjct: 253 EPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARW 312

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F++MPS ++ SWN M+S Y Q+    E ++LF+++    V  D  T+  ++  C+    
Sbjct: 313 IFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTAD 372

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L+ GK +H    +    ++  + + ++ +Y+KC     A  VF R+   +++ W +M+ G
Sbjct: 373 LDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVG 432

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
           L+ N    +A   F QM+   +     +  +++  C  L    +GR VHA + +  + ++
Sbjct: 433 LAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASE 492

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDM-MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           + V +ALI+MY KC  I  A   F   +  K+ + +N MI GY  +G G +A+ +Y  M 
Sbjct: 493 VVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMN 552

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
             G++P++ TFV++L+ACSHSGLV+ G+ +F +M  DH   P    Y C++D L RAG  
Sbjct: 553 REGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRL 612

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
            +AE LI++MP      I E LL+ C LH ++ L  + A+ L  L+ +N + Y  L+NIY
Sbjct: 613 RQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIY 672

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +   RWD ++ VR LM E  I K P YS
Sbjct: 673 AKASRWDSVKYVRGLMMEQEIKKIPGYS 700



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 232/504 (46%), Gaps = 58/504 (11%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           LE A K+FDE+P+   V  N +++  ++N      + +   MS         T     KA
Sbjct: 105 LENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKA 164

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              LLD E G    GL +  GL    ++ +++L+   K G    A   F +M E + V +
Sbjct: 165 CMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCW 224

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
             M+ G  +     E   +F  M+   +   +V++ S++  C                  
Sbjct: 225 NVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGE---------------- 268

Query: 250 FSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
             RN+  G+ +H   +  G   D  +  +L+DMY K+GD++SA  IF N+P R++VSWNV
Sbjct: 269 -MRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNV 327

Query: 309 MIAGYGQKYQSTKAIELLQR--MKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
           MI+GY Q     + + L Q+  M   GF+   V S+  L  C R+ D+  G+        
Sbjct: 328 MISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQL--CSRTADLDGGKILHGFIYR 385

Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                       +F+ M + +V SW AML   +Q+ + ++A+KL
Sbjct: 386 RGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKL 445

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F +MQ   V  +  TL  ++  C  +G+L  G+ VHA   +     +  V + LI +Y+K
Sbjct: 446 FDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAK 505

Query: 452 CQRNELAERVF-HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           C +   AE VF + +   D++ +NSMI+G  ++ L  +A   + +M +  + P + +F +
Sbjct: 506 CSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVS 565

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKD 534
           +LS+C+      +G  +   + KD
Sbjct: 566 LLSACSHSGLVEEGIALFQNMVKD 589



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 225/456 (49%), Gaps = 61/456 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  +L  G+  DT +   LI++Y                               CK
Sbjct: 275 GKCMHGFVLGFGMSRDTRVLTTLIDMY-------------------------------CK 303

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK--MSNEGFVPTHITLA 124
           S D+E A  +F+ MP RN+VSWN +IS  V+NGL  + L ++ K  M + GF     T+ 
Sbjct: 304 SGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSG--TVV 361

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+ +  +   D++ G+  HG + + GLD N+ +  A++ LYAKCG   +A  VFE M   
Sbjct: 362 SLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNK 421

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N +++TAM+ GLA+     +AL++F  M  + V+ ++++L S++  C   G   E     
Sbjct: 422 NVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLRE----- 476

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS-NLPERSV 303
                      G+ VH    +  F +++ +  +L+DMYAK   ++SAE++F   L  + V
Sbjct: 477 -----------GRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDV 525

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
           + +N MI+GYG      KA+ +  RM   G +P+E T +++L AC  SG ++ G  +F +
Sbjct: 526 ILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQN 585

Query: 364 M-----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           M      +P+   +  ++   S++   ++A +L  +M F    P    L  +L+ C    
Sbjct: 586 MVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPF---TPTSGILETLLNGCLLHK 642

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
            +E G ++ A  L +    +  +   L  IY+K  R
Sbjct: 643 DIELGVKL-ADRLLSLESRNPSIYITLSNIYAKASR 677



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 212/483 (43%), Gaps = 38/483 (7%)

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
            D  L   L+  Y+  G +++A  +F  +P+   V  N M+ GY Q  +    IELL+ M
Sbjct: 87  GDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMM 146

Query: 330 KSCGFEPDEVTSINMLVAC-----------------------------------VRSGDI 354
             C  E D  T    L AC                                   V++GDI
Sbjct: 147 SRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDI 206

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
              +  F  M    V  WN M+  + Q    +E   LF +M +  ++P   T+  ++ SC
Sbjct: 207 MCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSC 266

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
             M  L  GK +H   L      D  V + LI +Y K    E A  +F  +P  ++V WN
Sbjct: 267 GEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWN 326

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
            MI+G   N L +E    F+++  +++     +  +++  C++ +    G+ +H  I + 
Sbjct: 327 VMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRR 386

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G   ++ + +A++++Y KCG +  A   F+ M  KN ++W  M+ G AQNG+  +A++L+
Sbjct: 387 GLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLF 446

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
             M    V  + +T V+++  C+  GL+  G  +  ++   H    ++   T +ID   +
Sbjct: 447 DQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVV-VMTALIDMYAK 505

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR--LDPKNSAPYS 712
               + AEM+        D +++  ++S   +H     A      + R  L P  S   S
Sbjct: 506 CSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVS 565

Query: 713 LLA 715
           LL+
Sbjct: 566 LLS 568



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/447 (22%), Positives = 209/447 (46%), Gaps = 55/447 (12%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           ++IL+   K+ D+  A   F +M E++VV WN +I   ++ GL  +  +++  M      
Sbjct: 194 SSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIE 253

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P+ +T+ S+ ++   + ++  G+  HG V+  G+ ++  V   L+ +Y K G  + A  +
Sbjct: 254 PSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWI 313

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           FE M   N V++  M+SG  +   +VE L +F+ +I   V  DS ++ S++ +C+R    
Sbjct: 314 FENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRT--- 370

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                 A  D        G+ +H    + G + +L L  +++D+YAK G +  A  +F  
Sbjct: 371 ------ADLDG-------GKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFER 417

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +  ++V+SW  M+ G  Q   +  A++L  +M++     + +T ++++  C   G ++ G
Sbjct: 418 MKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREG 477

Query: 358 REMFDSMPSPSVSS------------------------------------WNAMLSSYSQ 381
           R +  ++     +S                                    +N+M+S Y  
Sbjct: 478 RSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGM 537

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK--TASHIDN 439
                +A+ ++  M   G++P+ +T   +LS+C+  G++E G  +    +K    +  D 
Sbjct: 538 HGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDK 597

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIP 466
             A  ++ + S+  R   AE + +++P
Sbjct: 598 LYAC-IVDLLSRAGRLRQAEELINQMP 623


>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Brachypodium distachyon]
          Length = 734

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 175/525 (33%), Positives = 279/525 (53%), Gaps = 37/525 (7%)

Query: 259 VHCLTIKL-GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
           VH L  KL    +++ +S +LL+MY K G +  A+++F  +P R+ VSW  M+AGY  + 
Sbjct: 139 VHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARK 198

Query: 318 QSTKAIELLQRM-KSCGFEPDEVTSINMLVAC---------------------------- 348
            S +A EL ++M   C    +E  +  +L A                             
Sbjct: 199 CSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVE 258

Query: 349 -------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                   ++G +     +F+S    +  +W+AM++ YSQ+ N + A+++F +M   G  
Sbjct: 259 NSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFP 318

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P   TL  +L++C+ +G L  GKQ H   +K    +  YV S L+ +Y+KC     A+  
Sbjct: 319 PTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKEC 378

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F++  ELDIV W +M+ G   N    +A M + +M +  ++P   +  ++L +CA L++ 
Sbjct: 379 FNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAAL 438

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             G+Q+H QI K G+     VGSAL  MY KCG++      F  M  ++ + WN +I G+
Sbjct: 439 EPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGF 498

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           +QNG G++A+ L+++M   G  PD +TF+ +L ACSH GLVD G   F SM  D+G+ P 
Sbjct: 499 SQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPR 558

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           LDHY CM+D L RAG   EA+  I+ +       +W ++L +CR   +  +   A E+L 
Sbjct: 559 LDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLM 618

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            L   +SA Y LL+NIY++  +W+D+  VR LM    + KDP  S
Sbjct: 619 DLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCS 663



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 165/603 (27%), Positives = 267/603 (44%), Gaps = 95/603 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA  L++G      + N LI  YS      S   LF                    
Sbjct: 31  GEALHAWALKSGSSSHAPVSNSLITFYS------SFPRLF-------------------- 64

Query: 67  SDDLEFAYKLFDEMPE--RNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITL 123
              L  A+ +F ++P   R+V SWN+L++ L  +     ALS +  M S+   +P+  + 
Sbjct: 65  ---LPAAFAVFADIPAAARDVASWNSLLNPLSHH-RPLAALSHFRSMLSSSTILPSPHSF 120

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKI-GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           A+ F A+        G   H L  K+     N++V+ ALL++Y K G    A  VF+EM 
Sbjct: 121 AAAFTAAARAHSASAGAVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMP 180

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             NEV++ AM++G A      EA E+FR M+ +                    C +  + 
Sbjct: 181 HRNEVSWAAMVAGYAARKCSQEAFELFRQMLGE--------------------CPLHKNE 220

Query: 243 FAQSDNKFSRNVH-----GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           F  +    + +V      G QVH L +K G    + + NSL+ MYAK G MD+A  +F +
Sbjct: 221 FVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFES 280

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
             ER+ ++W+ MI GY Q   +  A+ +  +M + GF P E T + +L AC         
Sbjct: 281 SKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEG 340

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      + G I   +E F+      +  W AM++ + Q+
Sbjct: 341 KQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQN 400

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
              ++A+ L+  M   GV P+  T+  +L +CA +  LE GKQ+H   LK    +   V 
Sbjct: 401 GEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVG 460

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           S L  +YSKC   E    VF R+P  D++ WNS+I+G S N    +A   F++M+     
Sbjct: 461 SALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTA 520

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQ 561
           P   +F  VL +C+ +    +G      + KD G    +   + ++++  + G +  A+ 
Sbjct: 521 PDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKD 580

Query: 562 FFD 564
           F +
Sbjct: 581 FIE 583



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 135/280 (48%), Gaps = 10/280 (3%)

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL--AERVFHRIPEL--DIVCWNSMIA 478
           G+ +HA +LK+ S     V++ LI  YS   R  L  A  VF  IP    D+  WNS++ 
Sbjct: 31  GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90

Query: 479 GLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK-DGY 536
            LS +   + A   F+ M   + + P+  SFA   ++ A+  S+  G  VHA   K    
Sbjct: 91  PLS-HHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSA 149

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
            +++FV +AL+ MYCK G I  A+  FD M  +N V+W  M+ GYA      EA  L++ 
Sbjct: 150 SSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQ 209

Query: 597 MIAS-GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
           M+    +  ++    A+L+A S    + +GV++ + + +  G+   +     ++    +A
Sbjct: 210 MLGECPLHKNEFVATAVLSAISVPLGLPMGVQV-HGLVVKDGMVGFVSVENSLVTMYAKA 268

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           G   +A   + E   + + + W  +++    + N   A R
Sbjct: 269 GCM-DAAFHVFESSKERNSITWSAMITGYSQNGNAESAVR 307


>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
          Length = 667

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 200/693 (28%), Positives = 335/693 (48%), Gaps = 80/693 (11%)

Query: 93  SALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLD 152
           S LVR  L   A+++++  +    VP           ++      H  R HGL       
Sbjct: 4   SPLVRQCL---AVTIFHSKNTAPLVPAAAAQLHALLLTSG-----HLLRYHGL------- 48

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT-AMMSGLAKTDRVVEALEMFRL 211
                 + L  +Y  CG    A  +  +M +P  V+F+ +++          EAL ++  
Sbjct: 49  ------HPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSA 102

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M     + D ++       CA                +  R  HG+ VHC  +  GF  D
Sbjct: 103 M----RAFDHLTFPFAAKACA--------------GLRLGR--HGRAVHCRALAAGFGGD 142

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
            ++ N+L+ MY   GD+ +AE +F  +  R+VVSWN +IAG  +   + +A+E+   M +
Sbjct: 143 TYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAA 202

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGR----------------------EMFDSMPS--- 366
            G   D  T +++L AC ++ D+ TGR                      +M+    S   
Sbjct: 203 DGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLED 262

Query: 367 -----------PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK-PDRTTLAIILSSC 414
                        V SW AM+ +Y  ++   EAI L  +M   G   P+  T+  +LS+C
Sbjct: 263 ARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSAC 322

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           A+M   +  K  HA  ++     D  V + LI  Y++C + +L      R        WN
Sbjct: 323 ASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLER-GSWRAETWN 381

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           + ++G +++  + +A   FK+M    + P   + A++L + A+ +   +G+ +H  +   
Sbjct: 382 AALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTL 441

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G++    + + LI++Y K GD+  A   F  +  K+ V W  +I GY+ +G+   A+ LY
Sbjct: 442 GFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLY 501

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
             M+ SG KP+ +T   +L ACSH+G++D G+++F  M+  HG+ P  +HY+C++D LGR
Sbjct: 502 DRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGR 561

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           AG   EA  LI +MP +    +W  LL +C LH NV   + AA+ LF+LDP+N+  Y LL
Sbjct: 562 AGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLL 621

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            NIY++  RW D++ VR +M E  ++K+P  SL
Sbjct: 622 GNIYAAADRWRDVQDVRRMMVERGLLKEPGSSL 654



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 211/474 (44%), Gaps = 64/474 (13%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D Y  NA++S      D+  A  +F  M  R VVSWN +I+  V+NG  E+AL V+ +M+
Sbjct: 142 DTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMA 201

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            +G      T+ SV  A     D+  GR  H LV   GL   + V NAL+ +Y KC   +
Sbjct: 202 ADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLE 261

Query: 173 HAVPVFEEMSEPNE-VTFTAMMSGLAKTDRVVEALEM-FRLMIRKAVSIDSVSLSSVLGV 230
            A  VF+      + V++TAM+      DR  EA+ +  ++++  A   + V++  +L  
Sbjct: 262 DARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSA 321

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CA    G                 H +  H L I+LG ++D+ +  +L+D YA+ G M  
Sbjct: 322 CASMPSG----------------KHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKL 365

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
             +       R+  +WN  ++GY    +  KAIEL +RM +    PD  T  ++L A   
Sbjct: 366 MRLTLERGSWRA-ETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAE 424

Query: 351 SGDIKTGRE-----------------------------------MFDSMPSPSVSSWNAM 375
           S D+K G+                                    +F  +P   V +W  +
Sbjct: 425 SADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTI 484

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           ++ YS   + + AI L+  M   G KP+  T+A +L +C+  G+++ G +V     K   
Sbjct: 485 IAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKV----FKDMR 540

Query: 436 HIDNYVASG-----LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
           ++   + +G     L+ +  +  R E A R+   +P E     W +++    L+
Sbjct: 541 NVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLH 594



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 199/414 (48%), Gaps = 56/414 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +   GL D   + N LI++Y KC +   A+ +FD                 CK
Sbjct: 228 GRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFD----------------HCK 271

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLAS 125
            D              ++VVSW  +I A V N    +A+S+  +M   G   P  +T+  
Sbjct: 272 HD--------------KDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVY 317

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A  ++   +H +  H L I++GL  +I V  AL+  YA+CG  K      E  S   
Sbjct: 318 LLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRA 377

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           E T+ A +SG   + R  +A+E+F+ MI ++V  DS +++S+L              +A+
Sbjct: 378 E-TWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASIL------------PAYAE 424

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S +       G+ +HC  + LGF     ++  L+D+Y+K GD+D+A  +F  LPE+ VV+
Sbjct: 425 SADL----KEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVA 480

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  +IAGY     +  AI L  RM   G +P+ VT   +L AC  +G I  G ++F  M 
Sbjct: 481 WTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMR 540

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +     P+   ++ ++    ++   +EA +L ++M F   +P  +    +L +C
Sbjct: 541 NVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPF---EPSTSVWGALLGAC 591



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 19/223 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  +L  G    T +   LI++YSK  +  +A  LF  +P KD+ +W  I++    
Sbjct: 431 GKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSI 490

Query: 67  SDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFVPTHI 121
                 A  L+D M E     N V+   L+ A    G+ ++ + V+  M N  G +P   
Sbjct: 491 HGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNG- 549

Query: 122 TLASVFKASTALLDV--EHGR--RCHGLVIKIGLDKNIYVANALLS---LYAKCGWTKHA 174
                 +  + L+D+    GR    H L+  +  + +  V  ALL    L+    + + A
Sbjct: 550 ------EHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVA 603

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
                ++   N  ++  + +  A  DR  +  ++ R+M+ + +
Sbjct: 604 AKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGL 646


>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
           from Arabidopsis thaliana BAC F28A21 gi|T04867 and
           contains multiple PPR PF|01535 repeats. EST gb|AI999742
           comes from this gene. This gene may be cut off, partial
           [Arabidopsis thaliana]
          Length = 757

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 183/641 (28%), Positives = 320/641 (49%), Gaps = 82/641 (12%)

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           + H  ++K G   + Y++  L++ Y+       A  V + + +P   +F++++  L K  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              +++ +F  M    +  DS  L ++  VCA                + S    G+Q+H
Sbjct: 96  LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCA----------------ELSAFKVGKQIH 139

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
           C++   G + D  +  S+  MY + G M  A  +F  + ++ VV+ + ++  Y +K    
Sbjct: 140 CVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLE 199

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
           + + +L  M+S G E +                               + SWN +LS ++
Sbjct: 200 EVVRILSEMESSGIEAN-------------------------------IVSWNGILSGFN 228

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           +S  HKEA+ +F+++   G  PD+ T++ +L S     +L  G+ +H   +K     D  
Sbjct: 229 RSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKC 288

Query: 441 VASGLIGIYSKC----------------------------QRNELAERVFH-------RI 465
           V S +I +Y K                              RN L ++          + 
Sbjct: 289 VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
            EL++V W S+IAG + N  DIEA   F++M+   + P   +  ++L +C  +++   GR
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGR 408

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
             H    +   ++++ VGSALI+MY KCG I  ++  F+MM  KN V WN +++G++ +G
Sbjct: 409 STHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHG 468

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
              E + +++ ++ + +KPD I+F ++L+AC   GL D G + F  M  ++G++P L+HY
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
           +CM++ LGRAG   EA  LI EMP + D  +W  LL+SCRL  NV LA+ AAE+LF L+P
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEP 588

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +N   Y LL+NIY++ G W ++ ++R  M    + K+P  S
Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 222/440 (50%), Gaps = 31/440 (7%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A   GK +H     +GL  D F+   +  +Y +C     A+ +FD+M  KD+ + +A+L 
Sbjct: 131 AFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLC 190

Query: 63  AQCKSDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
           A  +   LE   ++  EM     E N+VSWN ++S   R+G  ++A+ ++ K+ + GF P
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
             +T++SV  +      +  GR  HG VIK GL K+  V +A++ +Y K G     + +F
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            +          A ++GL++   V +ALEMF L   + + ++ VS +S++  CA+ G  +
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370

Query: 239 ES-DVFAQSD------------------NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           E+ ++F +                       +   HG+  H   +++    ++H+ ++L+
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
           DMYAK G ++ ++++F+ +P +++V WN ++ G+    ++ + + + + +     +PD +
Sbjct: 431 DMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490

Query: 340 TSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           +  ++L AC + G    G + F  M       P +  ++ M++   ++   +EA  L +E
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550

Query: 395 MQFRGVKPDRTTLAIILSSC 414
           M F   +PD      +L+SC
Sbjct: 551 MPF---EPDSCVWGALLNSC 567



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 124/571 (21%), Positives = 235/571 (41%), Gaps = 127/571 (22%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           HA IL++G  +D ++  +LI  YS  N  + A  +   +P   IYS+++           
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSS----------- 86

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
                               LI AL +  L  +++ V+++M + G +P    L ++FK  
Sbjct: 87  --------------------LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC 126

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
             L   + G++ H +    GLD + +V  ++  +Y +CG    A  VF+ MS+ + VT +
Sbjct: 127 AELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCS 186

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS---- 246
           A++   A+   + E + +   M    +  + VS + +L    R G   E+ V  Q     
Sbjct: 187 ALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL 246

Query: 247 ----DNKFSRNV-----------HGQQVHCLTIKLGFEADLHLSNSLLDMYAK------- 284
               D     +V            G+ +H   IK G   D  + ++++DMY K       
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGI 306

Query: 285 ------------------------NGDMDSAEVIFSNLPERS----VVSWNVMIAGYGQK 316
                                   NG +D A  +F    E++    VVSW  +IAG  Q 
Sbjct: 307 ISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQN 366

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------------------- 348
            +  +A+EL + M+  G +P+ VT  +ML AC                            
Sbjct: 367 GKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG 426

Query: 349 -------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                   + G I   + +F+ MP+ ++  WN++++ +S     KE + +F  +    +K
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486

Query: 402 PDRTTLAIILSSCAAMGILESGK---QVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           PD  +   +LS+C  +G+ + G    ++ +        +++Y  S ++ +  +  + + A
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY--SCMVNLLGRAGKLQEA 544

Query: 459 ERVFHRIP-ELDIVCWNSMIAGLSL-NSLDI 487
             +   +P E D   W +++    L N++D+
Sbjct: 545 YDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 174/359 (48%), Gaps = 32/359 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+H ++++ GL  D  + + +I++Y K  + +    LF++    +    NA ++   +
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330

Query: 67  SDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
           +  ++ A ++F+   E+    NVVSW ++I+   +NG + +AL ++ +M   G  P H+T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + S+  A   +  + HGR  HG  +++ L  N++V +AL+ +YAKCG    +  VF  M 
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC------ 236
             N V + ++M+G +   +  E + +F  ++R  +  D +S +S+L  C + G       
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510

Query: 237 ---------GVESDV--FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
                    G++  +  ++   N   R    Q+ + L  ++ FE D  +  +LL+     
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570

Query: 286 GDMDSAEVIFSNL-------PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
            ++D AE+    L       P   V+  N+    Y  K   T+   +  +M+S G + +
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNI----YAAKGMWTEVDSIRNKMESLGLKKN 625


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 171/506 (33%), Positives = 266/506 (52%), Gaps = 70/506 (13%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+LL  YAK+G + + +  F  +P R  VS+N  IAG+       +++EL +RM+  GFE
Sbjct: 93  NALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152

Query: 336 PDEVTSINMLVACV-----------------------------------RSGDIKTGREM 360
           P E T +++L A                                     + G+I+  R +
Sbjct: 153 PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           FD +   ++ SWN M+S Y+++   ++ I L  +M+  G  PD+ T++ I+++       
Sbjct: 213 FDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA------- 265

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
                                       Y +C R + A RVF    E DIVCW +M+ G 
Sbjct: 266 ----------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGY 297

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
           + N  + +A + F +M    + P  ++ ++V+SSCAKL+S   G+ VH +    G  N++
Sbjct: 298 AKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL 357

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            V SALI+MY KCG I  AR  F++M  +N V+WN MI G AQNG+  +A+ L+++M+  
Sbjct: 358 LVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
             KPD++TF+ IL+AC H   ++ G E F+S+   HG+ P LDHY CM++ LGR G   +
Sbjct: 418 KFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQ 477

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           A  LI  M    D +IW  LLS C    ++  A+ AA  LF LDP  + PY +L+N+Y+S
Sbjct: 478 AVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYAS 537

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
           +GRW D+ +VR LM    + K   +S
Sbjct: 538 MGRWKDVASVRNLMKSKNVKKFAGFS 563



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/471 (30%), Positives = 235/471 (49%), Gaps = 65/471 (13%)

Query: 7   GKLLHAHILRNGLFD--DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
            K L +H + + LF   D+FL N+L+ LY+K      AQ+LFDKM  +D +SWNA+LSA 
Sbjct: 41  AKRLQSH-MEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAY 99

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            KS  ++     FD MP R+ VS+N  I+    N   +++L ++ +M  EGF PT  T+ 
Sbjct: 100 AKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIV 159

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+  AS  LLD+ +G++ HG +I      N+++ NAL  +YAKCG  + A  +F+ +++ 
Sbjct: 160 SILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKK 219

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG------- 237
           N V++  M+SG AK  +  + + +   M       D V++S+++    +  CG       
Sbjct: 220 NLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQ--CGRVDEARR 277

Query: 238 ----------------------------------------VESDVFAQSD-----NKFSR 252
                                                   +E D +  S       K + 
Sbjct: 278 VFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLAS 337

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
             HGQ VH  +I  G   +L +S++L+DMY+K G +D A  +F+ +P R+VVSWN MI G
Sbjct: 338 LHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVG 397

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SP 367
             Q      A+EL + M    F+PD VT I +L AC+    I+ G+E FDS+      +P
Sbjct: 398 CAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTP 457

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           ++  +  M++   ++   ++A+ L + M      PD    + +LS C+  G
Sbjct: 458 TLDHYACMVNLLGRTGRIEQAVALIKNMAH---DPDFLIWSTLLSICSTKG 505



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/578 (26%), Positives = 272/578 (47%), Gaps = 71/578 (12%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPT----HITLASVFKASTALLDVEHGRRC 142
           ++  L+   VR     +A  + + M +  F PT    H  L  ++     L D ++    
Sbjct: 24  AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQN---- 79

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
             L  K+ L ++ +  NALLS YAK G  ++    F+ M   + V++   ++G +     
Sbjct: 80  --LFDKM-LKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCP 136

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            E+LE+F+ M R+       ++ S+L   A+             D ++     G+Q+H  
Sbjct: 137 QESLELFKRMQREGFEPTEYTIVSILNASAQ-----------LLDLRY-----GKQIHGS 180

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            I   F  ++ + N+L DMYAK G+++ A  +F  L ++++VSWN+MI+GY +  Q  K 
Sbjct: 181 IIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKC 240

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
           I LL +M+  G  PD+VT   ++ A  + G +   R +F       +  W AM+  Y+++
Sbjct: 241 IGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKN 300

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
              ++A+ LF EM    ++PD  TL+ ++SSCA +  L  G+ VH  S+    + +  V+
Sbjct: 301 GREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVS 360

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           S LI +YSKC   + A  VF+ +P  ++V WN+MI G + N  D +A   F+ M Q +  
Sbjct: 361 SALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFK 420

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +F  +LS+C           +H                        C  I   +++
Sbjct: 421 PDNVTFIGILSAC-----------LH------------------------CNWIEQGQEY 445

Query: 563 FDMMHGKNTVT-----WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
           FD +  ++ +T     +  M++   + G  ++AV L K+M      PD + +  +L+ CS
Sbjct: 446 FDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHD---PDFLIWSTLLSICS 502

Query: 618 HSG-LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
             G +V+  V   +  +LD  +       + M   +GR
Sbjct: 503 TKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGR 540



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 176/367 (47%), Gaps = 14/367 (3%)

Query: 387 EAIKLFREMQFRGVKPDRTTL-AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           +A +L   M+    +P  + L   +L   A  G L   + +    LK     D +  + L
Sbjct: 40  QAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKR----DXFSWNAL 95

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           +  Y+K    +  +  F R+P  D V +N+ IAG S NS   E+   FK+M++    PT+
Sbjct: 96  LSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTE 155

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
           ++  ++L++ A+L     G+Q+H  I    ++ ++F+ +AL +MY KCG+I  AR  FD 
Sbjct: 156 YTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDC 215

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  KN V+WN MI GYA+NG  ++ + L   M  SG  PD +T   I+ A    G VD  
Sbjct: 216 LTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEA 275

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM---PCKDDPVIWEVLLS 682
             +F+  +     E  +  +T M+    + G   +A +L +EM     + D      ++S
Sbjct: 276 RRVFSEFK-----EKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVS 330

Query: 683 SCRLHANVRLAKRA-AEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           SC   A++   +    + +      N    S L ++YS  G  DD R+V  LM    +V 
Sbjct: 331 SCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVS 390

Query: 742 DPAYSLG 748
             A  +G
Sbjct: 391 WNAMIVG 397



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 157/346 (45%), Gaps = 52/346 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN-------- 58
           GK +H  I+      + F+ N L ++Y+KC     A+ LFD +  K++ SWN        
Sbjct: 174 GKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAK 233

Query: 59  ---------------------------AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNL 91
                                       I++A C+   ++ A ++F E  E+++V W  +
Sbjct: 234 NGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAM 293

Query: 92  ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
           +    +NG EE AL ++N+M  E   P   TL+SV  +   L  + HG+  HG  I  GL
Sbjct: 294 MVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
           + N+ V++AL+ +Y+KCG+   A  VF  M   N V++ AM+ G A+     +ALE+F  
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413

Query: 212 MIRKAVSIDSVSLSSVLGVCA-----------------REGCGVESDVFAQSDNKFSRNV 254
           M+++    D+V+   +L  C                  + G     D +A   N   R  
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTG 473

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
             +Q   L   +  + D  + ++LL + +  GD+ +AEV   +L E
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFE 519



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/281 (20%), Positives = 115/281 (40%), Gaps = 41/281 (14%)

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY-VNDIFVGSALIEMYCKCGDIYGARQF 562
           T  ++  ++  C + +   Q +++ + +E   +   D F+ + L+ +Y K G +  A+  
Sbjct: 21  TSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNL 80

Query: 563 FDMMHGKNTVTWNEMIHGYAQNG-------------YGD------------------EAV 591
           FD M  ++  +WN ++  YA++G             + D                  E++
Sbjct: 81  FDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESL 140

Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
            L+K M   G +P + T V+IL A +    +  G +I  S+ + + +  +   +  + D 
Sbjct: 141 ELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFI-WNALTDM 199

Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP- 710
             + G   +A  L D +  K + V W +++S    +A     ++    L ++      P 
Sbjct: 200 YAKCGEIEQARWLFDCLT-KKNLVSWNLMISG---YAKNGQPEKCIGLLHQMRLSGHMPD 255

Query: 711 ---YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSLG 748
               S +   Y   GR D+ R V     E  IV   A  +G
Sbjct: 256 QVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVG 296


>gi|224080081|ref|XP_002306009.1| predicted protein [Populus trichocarpa]
 gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa]
          Length = 870

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 218/819 (26%), Positives = 386/819 (47%), Gaps = 127/819 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH---KDIYSWNAILSA 63
           G+ LH  I+R G      +   L+ +Y+KC     ++ LF ++     +D   WN +LS 
Sbjct: 43  GRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLFGEIGSCNDRDPIFWNILLSG 102

Query: 64  QCKSD--DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
              S   D E   +LF EM   N                       Y K       P+ +
Sbjct: 103 YAGSRVYDAE-TLRLFREMHGAN-----------------------YPK-------PSSV 131

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT-KHAVPVFEE 180
           T A V      L DV  GR  +   IK GLD +    NAL+S+YAKCG   + A   F+ 
Sbjct: 132 TAAIVLPVCARLGDVYMGRSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDS 191

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           + E + V++ A++SG A+ + + +A  +F  M++  +  +  +L+++L VCA        
Sbjct: 192 IDEKDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVCA-------- 243

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                S +++     G+++H   ++     AD+ + N+L+  Y + G ++ AE++F  + 
Sbjct: 244 -----SFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRME 298

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGR 358
            R +VSWN +IAGY    + +KA+EL   + +    EPD VT + ++ AC +S ++  G+
Sbjct: 299 LRDLVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGK 358

Query: 359 ------------------------------------EMFDSMPSPSVSSWNAMLSSYSQS 382
                                               E F  +    + SWN+ML +  +S
Sbjct: 359 MIHGYVLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVES 418

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK-----TASHI 437
             +   ++L R M   G  PD  T+  ++  C  +   +  K+ H+ S++     +   +
Sbjct: 419 GYNTWFLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDV 478

Query: 438 DNYVASGLIGIYSKCQRNELAERVF--------------------------------HRI 465
           +  + + ++  Y+KC   E A +VF                                +R+
Sbjct: 479 EPTIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRM 538

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
           P  D+  WN M+   + N    +A   F +++ + + P   +  ++L +CA+++S    +
Sbjct: 539 PSSDLSVWNLMVRLYAENDCSSQALGLFHELQAHGIKPDAVTIMSLLPACAEMASVQLIK 598

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
           Q H    +  +  D+ +  AL ++Y KCG I  A + F ++  K+ + +  MI GYA +G
Sbjct: 599 QCHGYAIRSCF-GDLHLDGALQDVYAKCGSIGYAFKLFQLIPNKDLIIFTAMIRGYAMHG 657

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
            G EA+  +  MI  G+KPD +    +L+ACSH+GLVD G+ IF S++  HG++  ++ Y
Sbjct: 658 MGKEALGTFFHMIELGIKPDHVIITTVLSACSHAGLVDEGLNIFYSIEKVHGMKLTMEQY 717

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
           +C++D L R G   +A  ++  MP + +  IW  LL +CR H  V L +  A+ LF+++ 
Sbjct: 718 SCVVDLLARGGRIDDAFSMVTGMPIEANANIWGTLLGACRTHHEVELGRFVADRLFKIEA 777

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           +N   Y +L+N+Y++  RWD +  +R+LM    + K PA
Sbjct: 778 ENIGNYVVLSNLYAADARWDGVMEIRKLMRTRDL-KKPA 815



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 173/695 (24%), Positives = 290/695 (41%), Gaps = 127/695 (18%)

Query: 105 LSVYNKM---SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANAL 161
           L  +N M    N  F   +  +AS+ K+   L  ++ GR  HG +++IG      V+ AL
Sbjct: 6   LKAWNTMISDCNGDFRQDYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKAL 65

Query: 162 LSLYAKCGWTKHAVPVFEEMSEPNE---VTFTAMMSGLAKTDRV--VEALEMFRLM-IRK 215
           L++YAKCG    +  +F E+   N+   + +  ++SG A + RV   E L +FR M    
Sbjct: 66  LNMYAKCGALDESKKLFGEIGSCNDRDPIFWNILLSGYAGS-RVYDAETLRLFREMHGAN 124

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
                SV+ + VL VCAR G     DV+            G+ V+C  IK G +      
Sbjct: 125 YPKPSSVTAAIVLPVCARLG-----DVYM-----------GRSVNCYAIKSGLDTHTLAG 168

Query: 276 NSLLDMYAKNGDM-DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
           N+L+ MYAK G +   A   F ++ E+ VVSWN +I+G+ +      A  L   M     
Sbjct: 169 NALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQI 228

Query: 335 EPDEVTSINMLVAC---------------------------------------VRSGDIK 355
           +P+  T  N+L  C                                       +R G ++
Sbjct: 229 KPNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVE 288

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE-MQFRGVKPDRTTLAIILSSC 414
               +F  M    + SWNA+++ Y+ +    +A++LF E +    ++PD  TL  I+ +C
Sbjct: 289 EAELLFRRMELRDLVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPAC 348

Query: 415 AAMGILESGKQVHAASLKTASHI-DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           A    L  GK +H   L+      D  V + L+  Y+KC   E A   F  I   D++ W
Sbjct: 349 AQSRNLHVGKMIHGYVLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLISW 408

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           NSM+  L  +  +       + M      P   +  +V+  C  +    + ++ H+   +
Sbjct: 409 NSMLDALVESGYNTWFLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIR 468

Query: 534 DGYVNDIF-----VGSALIEMYCKCGDI-YGARQFFDMMHGKNTVT-------------- 573
              +   F     +G+A+++ Y KCG+I Y ++ F  +   +N VT              
Sbjct: 469 HRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLL 528

Query: 574 -----------------WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
                            WN M+  YA+N    +A+ L+ ++ A G+KPD +T +++L AC
Sbjct: 529 DEAYITFNRMPSSDLSVWNLMVRLYAENDCSSQALGLFHELQAHGIKPDAVTIMSLLPAC 588

Query: 617 SHSGLVDV-----GVEI---FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM 668
           +    V +     G  I   F  + LD  ++          D   + G    A  L   +
Sbjct: 589 AEMASVQLIKQCHGYAIRSCFGDLHLDGALQ----------DVYAKCGSIGYAFKLFQLI 638

Query: 669 PCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
           P K D +I+  ++    +H    + K A    F +
Sbjct: 639 PNK-DLIIFTAMIRGYAMHG---MGKEALGTFFHM 669



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/492 (22%), Positives = 207/492 (42%), Gaps = 109/492 (22%)

Query: 3   AHVAGKLLHAHILR-NGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           A+  GK +H ++LR N L  D F+ N L+  Y +      A+ LF +M  +D+ SWNAI+
Sbjct: 250 AYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAII 309

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +    + +   A +LF E+   +++                               P  +
Sbjct: 310 AGYASNGEWSKALELFHELLTLDMIE------------------------------PDSV 339

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
           TL  +  A     ++  G+  HG V++   L ++  V NAL+S YAKC   + A   F  
Sbjct: 340 TLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFM 399

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           +S  + +++ +M+  L ++      LE+ R M+ +  + DSV++ SV+  C         
Sbjct: 400 ISRRDLISWNSMLDALVESGYNTWFLELLRWMLSEGTTPDSVTILSVVHFCV-------- 451

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD------------- 287
           +V  +   K     H   +    +   F+ +  + N++LD YAK G+             
Sbjct: 452 NVLKEDKVK---EAHSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSE 508

Query: 288 -------------------MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
                              +D A + F+ +P   +  WN+M+  Y +   S++A+ L   
Sbjct: 509 NRNLVTFKAIISGYINCGLLDEAYITFNRMPSSDLSVWNLMVRLYAENDCSSQALGLFHE 568

Query: 329 MKSCGFEPDEVTSINMLVAC----------------VRS------------------GDI 354
           +++ G +PD VT +++L AC                +RS                  G I
Sbjct: 569 LQAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIRSCFGDLHLDGALQDVYAKCGSI 628

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               ++F  +P+  +  + AM+  Y+     KEA+  F  M   G+KPD   +  +LS+C
Sbjct: 629 GYAFKLFQLIPNKDLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKPDHVIITTVLSAC 688

Query: 415 AAMGILESGKQV 426
           +  G+++ G  +
Sbjct: 689 SHAGLVDEGLNI 700



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 168/372 (45%), Gaps = 45/372 (12%)

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M  P + +WN M+S  +           FR+        D   +A IL SCA +  ++ G
Sbjct: 1   MVGPYLKAWNTMISDCNGD---------FRQ--------DYQAVASILKSCAGLSAIKWG 43

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP---ELDIVCWNSMIAGL 480
           + +H + ++      + V+  L+ +Y+KC   + ++++F  I    + D + WN +++G 
Sbjct: 44  RALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLFGEIGSCNDRDPIFWNILLSGY 103

Query: 481 SLNSL-DIEAFMFFKQMR-QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           + + + D E    F++M   N   P+  + A VL  CA+L   + GR V+    K G   
Sbjct: 104 AGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKSGLDT 163

Query: 539 DIFVGSALIEMYCKCG----DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
               G+AL+ MY KCG    D Y A   FD +  K+ V+WN +I G+A+N   ++A RL+
Sbjct: 164 HTLAGNALVSMYAKCGLVCQDAYAA---FDSIDEKDVVSWNAIISGFAENNLMEDAFRLF 220

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH---------Y 645
             M+   +KP+  T   IL  C+     D  +  +   ++ HG   +L H         +
Sbjct: 221 SSMLKGQIKPNYTTLANILPVCAS---FDEYIAYWFGKEI-HGY--VLRHNELLADVFVW 274

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
             ++    R G   EAE+L   M  + D V W  +++    +     A     EL  LD 
Sbjct: 275 NALVSFYLRVGRVEEAELLFRRMELR-DLVSWNAIIAGYASNGEWSKALELFHELLTLDM 333

Query: 706 KNSAPYSLLANI 717
                 +LL  I
Sbjct: 334 IEPDSVTLLCII 345



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 27/263 (10%)

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           WN+MI+  + +         F+Q  Q        + A++L SCA LS+   GR +H  I 
Sbjct: 9   WNTMISDCNGD---------FRQDYQ--------AVASILKSCAGLSAIKWGRALHGSIV 51

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM---HGKNTVTWNEMIHGYAQNG-YGD 588
           + G+V+   V  AL+ MY KCG +  +++ F  +   + ++ + WN ++ GYA +  Y  
Sbjct: 52  RIGHVSCHAVSKALLNMYAKCGALDESKKLFGEIGSCNDRDPIFWNILLSGYAGSRVYDA 111

Query: 589 EAVRLYKDMIASGV-KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
           E +RL+++M  +   KP  +T   +L  C+  G V +G  + N   +  G++        
Sbjct: 112 ETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSV-NCYAIKSGLDTHTLAGNA 170

Query: 648 MIDCLGRAGHF-HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK 706
           ++    + G    +A    D +  K D V W  ++S    +  +  A R    + +   K
Sbjct: 171 LVSMYAKCGLVCQDAYAAFDSIDEK-DVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIK 229

Query: 707 NSAPYSLLANIYSSLGRWDDLRA 729
            +  Y+ LANI      +D+  A
Sbjct: 230 PN--YTTLANILPVCASFDEYIA 250


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 191/638 (29%), Positives = 332/638 (52%), Gaps = 55/638 (8%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H  V K G+  + + A  L SLYAKC   + A  VF+E   PN   + + +    +  + 
Sbjct: 24  HSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQW 83

Query: 203 VEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
            E L +F LMI  A  + D+ ++   L  CA    G+      +  + F++         
Sbjct: 84  EETLRLFHLMICTAGEAPDNFTIPIALKACA----GLRMLELGKVIHGFAKK-------- 131

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
              ++G  +D+ + ++L+++Y+K G M  A  +F        V W  M+ GY Q     +
Sbjct: 132 -NDEIG--SDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEE 188

Query: 322 AIELLQRM--KSCGFEPDEVTSINMLVACVR-------------------SGDI------ 354
           A+ L  +M    C    D VT ++++ AC +                    GD+      
Sbjct: 189 ALALFSQMVMMDC-VVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSL 247

Query: 355 -----KTGRE-----MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
                KTG E     +F  MP   V SW+ M++ Y+ +E   EA+ LF EM  +  +P+ 
Sbjct: 248 LNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNS 307

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
            T+   L +CA    LE GK++H  ++     +D  V++ LI +Y KC   + A  +F R
Sbjct: 308 VTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQR 367

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           +P+ D+V W ++++G + N +  ++   F+ M  + + P   +   +L++ ++L    Q 
Sbjct: 368 LPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQA 427

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
             +H  + + G+ +++FVG++LIE+Y KCG +  A + F  M  ++ V W+ MI  Y  +
Sbjct: 428 LCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIH 487

Query: 585 GYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
           G G EA+ ++  M+  S V+P+++TF++IL+ACSH+GLV+ G++IF+ M  D+ + P  +
Sbjct: 488 GRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSE 547

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
           H+  M+D LGR G   +A  +I+ MP    P +W  LL +CR+H N+ + + AA+ LF L
Sbjct: 548 HFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWL 607

Query: 704 DPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           DP ++  Y LL+NIY+  G+WD++  +R  + E  + K
Sbjct: 608 DPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKK 645



 Score =  285 bits (728), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 143/415 (34%), Positives = 231/415 (55%)

Query: 333  GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
            G + D        +  V    I     +F+ +P+P    WN M+  ++       +++L+
Sbjct: 747  GLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 806

Query: 393  REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
             +M  +G+KPD+      L SCA +  L+ GK +H   +      D +V + L+ +Y+KC
Sbjct: 807  SKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKC 866

Query: 453  QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
               E A  VF ++   D+V W SMI+G + N  + E   FF  MR + + P + S  +VL
Sbjct: 867  GDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVL 926

Query: 513  SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
             +C  L +  +G   H+ + + G+  DI V +A+++MY KCG +  AR  FD   GK+ V
Sbjct: 927  LACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLV 986

Query: 573  TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
             W+ MI  Y  +G+G +A+ L+  M+ +GV+P  +TF  +L+ACSHSGL++ G   F  M
Sbjct: 987  CWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLM 1046

Query: 633  QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
              +  +   L +Y CM+D LGRAG   EA  LI+ MP + D  IW  LL +CR+H N+ L
Sbjct: 1047 TEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDL 1106

Query: 693  AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            A++ A+ LF LDP ++  + LL+NIY++  RW+++  VR++M+     K   +SL
Sbjct: 1107 AEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSL 1161



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/566 (28%), Positives = 270/566 (47%), Gaps = 90/566 (15%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH+ + + G+  DTF   +L  LY+KC +  +A+ +FD+ PH +++ WN+ L + C+   
Sbjct: 23  LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
            E   +LF  M                              +   G  P + T+    KA
Sbjct: 83  WEETLRLFHLM------------------------------ICTAGEAPDNFTIPIALKA 112

Query: 130 STALLDVEHGRRCHGLVIK---IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              L  +E G+  HG   K   IG D  ++V +AL+ LY+KCG    A+ VFEE   P+ 
Sbjct: 113 CAGLRMLELGKVIHGFAKKNDEIGSD--MFVGSALVELYSKCGQMGEALKVFEEFQRPDT 170

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           V +T+M++G  + +   EAL +F  M+    V +D V+L SV+  CA+            
Sbjct: 171 VLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQ------------ 218

Query: 246 SDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                  NV  G  VH L I+  F+ DL L NSLL++YAK G    A  +FS +PE+ V+
Sbjct: 219 -----LLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVI 273

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------ 358
           SW+ MIA Y     + +A+ L   M    FEP+ VT ++ L AC  S +++ G+      
Sbjct: 274 SWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIA 333

Query: 359 -----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                        ++F  +P   V SW A+LS Y+Q+    +++
Sbjct: 334 VWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSM 393

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            +FR M   G++PD   +  IL++ + +GI +    +H   +++  + + +V + LI +Y
Sbjct: 394 GVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELY 453

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSF 508
           SKC     A ++F  +   D+V W+SMIA   ++    EA   F QM +N  + P   +F
Sbjct: 454 SKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTF 513

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKD 534
            ++LS+C+      +G ++  ++  D
Sbjct: 514 LSILSACSHAGLVEEGLKIFDRMVHD 539



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 181/720 (25%), Positives = 320/720 (44%), Gaps = 80/720 (11%)

Query: 73   AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
            A  LF  +P+++VVSW  L+S   +NG+  K++ V+  M ++G  P  + +  +  AS+ 
Sbjct: 361  AVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSE 420

Query: 133  LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
            L   +     HG V++ G + N++V  +L+ LY+KCG    AV +F+ M   + V +++M
Sbjct: 421  LGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSM 480

Query: 193  MSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
            ++      R  EALE+F  M++ + V  ++V+  S+L  C+  G      +  +    F 
Sbjct: 481  IAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAG------LVEEGLKIFD 534

Query: 252  RNVHGQQVHCLTIKLGFEADL-----------------------HLSNSLLDMYAKNGDM 288
            R VH  Q+   +   G   DL                       H+  +LL     + ++
Sbjct: 535  RMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNI 594

Query: 289  DSAEVIFSNL--PERSVVSWNVMIAG-YGQKYQSTKAIELLQRMKSCG------------ 333
            +  E    NL   + S   + ++++  Y    +     EL  R+K  G            
Sbjct: 595  EMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEV 654

Query: 334  ------------FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                        F PD      +L    R  + + G+E++       +   + +L     
Sbjct: 655  RGGVHSFLASDRFHPDSQKIYELL----RKLEAQMGKEVY-------IPDLDFLLHDTGA 703

Query: 382  SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
                 + IK   E +++ +     T  I   SC         K+ HA         D+ +
Sbjct: 704  VLQFWQRIKA-TESKYKTIGSAPGTDTISCFSCL--------KKTHAKIFAYGLQYDSRI 754

Query: 442  ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
             +    +Y    R + A  VF  IP      WN MI G + +   + +   + +M +  +
Sbjct: 755  LTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGL 814

Query: 502  YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
             P +F+F   L SCA LS   +G+ +H  +   G  ND+FV +AL++MY KCGDI  AR 
Sbjct: 815  KPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARL 874

Query: 562  FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
             FD M  ++ V+W  MI GYA NGY  E +  +  M +SGV P+ ++ +++L AC + G 
Sbjct: 875  VFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGA 934

Query: 622  VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            +  G E F+S  +  G E  +   T ++D   + G    A  L DE   K D V W  ++
Sbjct: 935  LRKG-EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK-DLVCWSAMI 992

Query: 682  SSCRLHANVRLAKRAAEELFRLDPKNS-APYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
            +S  +H + R A    +++ +   + S   ++ + +  S  G  ++ +   +LM+E  ++
Sbjct: 993  ASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVI 1052



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 217/459 (47%), Gaps = 87/459 (18%)

Query: 7   GKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK++H    +N  +  D F+ + L+ELYSKC     A                       
Sbjct: 122 GKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEA----------------------- 158

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFVPTHITLA 124
                    K+F+E    + V W ++++   +N   E+AL+++++M   +  V   +TL 
Sbjct: 159 --------LKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLV 210

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV  A   LL+V+ G   HGLVI+   D ++ + N+LL+LYAK G  K A  +F +M E 
Sbjct: 211 SVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEK 270

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + ++++ M++  A  +   EAL +F  MI K    +SV++ S L  CA            
Sbjct: 271 DVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACA------------ 318

Query: 245 QSDNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                 SRN+  G+++H + +  GFE D  +S +L+DMY K    D A  +F  LP++ V
Sbjct: 319 -----VSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDV 373

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA---------------- 347
           VSW  +++GY Q   + K++ + + M S G +PD V  + +L A                
Sbjct: 374 VSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGY 433

Query: 348 CVRS-------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
            VRS                   G +    ++F  M    V  W++M+++Y       EA
Sbjct: 434 VVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEA 493

Query: 389 IKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           +++F +M +   V+P+  T   ILS+C+  G++E G ++
Sbjct: 494 LEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKI 532



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 225/508 (44%), Gaps = 52/508 (10%)

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
           D+F   +N   R+V   Q+H    K G   D   +  L  +YAK   + +A  +F   P 
Sbjct: 9   DLFQACNN--GRSV--SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPH 64

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMK-SCGFEPDEVTSINMLVACV---------- 349
            +V  WN  +  Y ++ Q  + + L   M  + G  PD  T    L AC           
Sbjct: 65  PNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKV 124

Query: 350 --------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                     + G +    ++F+    P    W +M++ Y Q+ 
Sbjct: 125 IHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNN 184

Query: 384 NHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
           + +EA+ LF +M     V  D  TL  ++S+CA +  +++G  VH   ++     D  + 
Sbjct: 185 DPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLV 244

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + L+ +Y+K    ++A  +F ++PE D++ W++MIA  + N    EA   F +M +    
Sbjct: 245 NSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFE 304

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P   +  + L +CA   +  +G+++H      G+  D  V +ALI+MY KC     A   
Sbjct: 305 PNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDL 364

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F  +  K+ V+W  ++ GYAQNG   +++ ++++M++ G++PD +  V IL A S  G+ 
Sbjct: 365 FQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIF 424

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
              +   +   +  G    +     +I+   + G   +A  L   M  + D VIW  +++
Sbjct: 425 QQAL-CLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIA 482

Query: 683 SCRLHANVRLAKRAAE--ELFRLDPKNS 708
           +  +H       R  E  E+F    KNS
Sbjct: 483 AYGIHG------RGGEALEIFDQMVKNS 504



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 134/297 (45%), Gaps = 10/297 (3%)

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
            S  Q+H+   KT    D + A+ L  +Y+KC   + A +VF   P  ++  WNS +   
Sbjct: 18  RSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSY 77

Query: 481 SLNSLDIEAFMFFKQM--RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV- 537
                  E    F  M     E  P  F+    L +CA L     G+ +H   +K+  + 
Sbjct: 78  CREKQWEETLRLFHLMICTAGEA-PDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIG 136

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
           +D+FVGSAL+E+Y KCG +  A + F+     +TV W  M+ GY QN   +EA+ L+  M
Sbjct: 137 SDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM 196

Query: 598 I-ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           +    V  D +T V++++AC+    V  G    + + +    +  L     +++   + G
Sbjct: 197 VMMDCVVLDPVTLVSVVSACAQLLNVKAG-SCVHGLVIRREFDGDLPLVNSLLNLYAKTG 255

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
               A  L  +MP K D + W  +++    +AN   A  A      +  K   P S+
Sbjct: 256 CEKIAANLFSKMPEK-DVISWSTMIAC---YANNEAANEALNLFHEMIEKRFEPNSV 308


>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 176/513 (34%), Positives = 271/513 (52%), Gaps = 38/513 (7%)

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY-QSTKAIELLQRMK 330
           +H  NS L   A   D   A V FSN+ + +  S+NVMI G    + +S+ A+E   RMK
Sbjct: 60  IHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMK 119

Query: 331 SCGFEPDEVTSINMLVAC-----------------------------------VRSGDIK 355
             G +P+ +T   + +AC                                    R G + 
Sbjct: 120 FLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMG 179

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
             R++FD +    + SWN+M+S YS+  +  EA+ LFREM   G +P+  +L  +L +C 
Sbjct: 180 DARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACG 239

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
            +G L+ G  V    ++    ++ ++ S LI +Y KC     A R+F  + + D V WN+
Sbjct: 240 ELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNA 299

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MI G + N +  EA   F+ MR +   P Q +   +LS+CA + +   G+QV     + G
Sbjct: 300 MITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERG 359

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
           + +D++VG+AL++MY KCG +  A + F  M  KN V+WN MI   A +G   EA+ L+K
Sbjct: 360 FQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFK 419

Query: 596 DMIASG--VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
            M+  G  V P+DITFV +L+AC H+GLVD G  +F+ M    G+ P ++HY+CM+D   
Sbjct: 420 SMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFS 479

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           RAGH  EA   +  MP K D VI   LL +C+   N+ +++R  + L  L+P NS  Y +
Sbjct: 480 RAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVI 539

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + +Y++L RWDD   +R LM +  + K P  S
Sbjct: 540 SSKLYANLRRWDDSARMRMLMKQKGVSKTPGCS 572



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 230/484 (47%), Gaps = 59/484 (12%)

Query: 25  LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERN 84
           L ++   L  +C +    + +  ++    I+  N+ L       D  +A   F  + +  
Sbjct: 31  LSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNILDPT 90

Query: 85  VVSWNNLISALVRNGLEEK-ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
             S+N +I  L     +   AL  Y++M   G  P ++T   +F A + LL VE+GR  H
Sbjct: 91  EYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGH 150

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
             VI+ GLD++ +V+++L+++YA+CG    A  VF+E+S+ + V++ +M+SG +K     
Sbjct: 151 CSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAG 210

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           EA+ +FR M+      + +SL SVLG C   G           D K      G  V    
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELG-----------DLKL-----GTWVEEFV 254

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
           ++     +  + ++L+ MY K GD+ SA  IF ++ ++  V+WN MI GY Q   S +AI
Sbjct: 255 VENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAI 314

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------------ 359
           +L Q M+     PD++T I +L AC   G +  G++                        
Sbjct: 315 KLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMY 374

Query: 360 -----------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG--VKPDRTT 406
                      +F  MP+ +  SWNAM+S+ +     +EA+ LF+ M   G  V P+  T
Sbjct: 375 AKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDIT 434

Query: 407 LAIILSSCAAMGILESGKQVH---AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
              +LS+C   G+++ G+++    ++S      I++Y  S ++ ++S+    E A     
Sbjct: 435 FVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHY--SCMVDLFSRAGHLEEAWDFVM 492

Query: 464 RIPE 467
            +PE
Sbjct: 493 TMPE 496



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 230/463 (49%), Gaps = 60/463 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G++ H  ++R GL +D  + + LI +Y++C     A+                       
Sbjct: 146 GRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDAR----------------------- 182

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+FDE+ ++++VSWN++IS   +     +A+ ++ +M   GF P  ++L SV
Sbjct: 183 --------KVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSV 234

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L D++ G      V++  +  N ++ +AL+ +Y KCG    A  +F+ M + ++
Sbjct: 235 LGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDK 294

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+ AM++G A+     EA+++F+ M   + + D ++L  +L  CA  G     D+    
Sbjct: 295 VTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGA---LDL---- 347

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+QV     + GF+ D+++  +L+DMYAK G +D+A  +F  +P ++ VSW
Sbjct: 348 ---------GKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSW 398

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCG--FEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           N MI+      Q+ +A+ L + M + G    P+++T + +L ACV +G +  GR +F  M
Sbjct: 399 NAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMM 458

Query: 365 PS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
            S     P +  ++ M+  +S++ + +EA      M     KPD   L  +L +C     
Sbjct: 459 SSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMP---EKPDEVILGALLGACQKRKN 515

Query: 420 LESGKQVHAASLK-TASHIDNYVASGLIGIYSKCQRNELAERV 461
           ++  ++V    L+   S+  NYV S    +Y+  +R + + R+
Sbjct: 516 IDISERVMKLLLELEPSNSGNYVISS--KLYANLRRWDDSARM 556


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 200/637 (31%), Positives = 307/637 (48%), Gaps = 91/637 (14%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEM--SEPNEVTFTAMMSGLAKTDRVVEALEMF 209
           D     A +L+S YA  G  + +   F+ +  +  + V   AM+S  A+      A+ +F
Sbjct: 86  DPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVF 145

Query: 210 RLMIRKAVSI--DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           R ++    S+  D  S +S+L           S V    D   S   H  Q+HC   KLG
Sbjct: 146 RSLLASDDSLRPDDYSFTSLL-----------SAVGQMHDLAVS---HCTQLHCAVHKLG 191

Query: 268 FEADLHLSNSLLDMYAK---NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
             A L +SN+L+ +Y K    G    A  +   +PE+                       
Sbjct: 192 AGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEK----------------------- 228

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                       DE+T   ++V  VR GD+   R  F+ +       WNAM+S Y QS  
Sbjct: 229 ------------DELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGM 276

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-- 442
             EA +LFR M  + + PD  T   +LS+CA  G    GK VH   ++         A  
Sbjct: 277 CAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALP 336

Query: 443 --SGLIGIYSKCQRNELAERVFHRIPELDIVCWNS------------------------- 475
             + L+ +YSK  +  +A ++F  +   D+V WN+                         
Sbjct: 337 VNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKS 396

Query: 476 ------MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
                 M++G     L  +A   F QMR  ++ P  +++A  +++C +L +   G+Q+HA
Sbjct: 397 ELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHA 456

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            + + G+      G+AL+ MY +CG +  AR  F +M   ++V+WN MI    Q+G+G E
Sbjct: 457 HLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGRE 516

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+ L+  M+A G+ PD I+F+ ILTAC+H+GLVD G + F SM+ D G+ P  DHY  +I
Sbjct: 517 ALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLI 576

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
           D LGRAG   EA  LI  MP +  P IWE +LS CR++ ++ L   AA++LF++ P++  
Sbjct: 577 DLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDG 636

Query: 710 PYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            Y LL+N YS+ GRW D   VR+LM +  + K+P  S
Sbjct: 637 TYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCS 673



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 181/661 (27%), Positives = 293/661 (44%), Gaps = 101/661 (15%)

Query: 8   KLLHAHILRNGLFDDT---FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + LHA +L   L  D     L  RL+ LY+   +  +   LF   P     +  +++SA 
Sbjct: 42  RCLHARLLTAALLHDPSHPHLTLRLLHLYTLSPDLATPAVLFRADPGP--VAATSLVSAY 99

Query: 65  CKSDDLEFAYKLFDEMP--ERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTH 120
             +  L  +   FD +P   R+ V  N +ISA  R  L   A+SV+  +  S++   P  
Sbjct: 100 AVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDD 159

Query: 121 ITLASVFKASTALLD--VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC---GWTKHAV 175
            +  S+  A   + D  V H  + H  V K+G    + V+NAL++LY KC   G T+ A 
Sbjct: 160 YSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDAR 219

Query: 176 PVFEEMSEPNEVTFT-------------------------------AMMSGLAKTDRVVE 204
            V +EM E +E+T+T                               AM+SG  ++    E
Sbjct: 220 KVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAE 279

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           A E+FR M+ K +  D  + +S+L  CA  G  +             ++VHGQ +  L  
Sbjct: 280 AFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLH-----------GKSVHGQFIR-LQP 327

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
               EA L ++N+L+ +Y+K+G +  A  IF ++  + VVSWN +++GY           
Sbjct: 328 DFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGY----------- 376

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                   + SG +     +F  MP  S  SW  M+S Y     
Sbjct: 377 ------------------------IESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGL 412

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            ++A+KLF +M+   VKP   T A  +++C  +G L+ GKQ+HA  ++      N   + 
Sbjct: 413 AEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNA 472

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           L+ +Y++C   + A  VF  +P +D V WN+MI+ L  +    EA   F QM    +YP 
Sbjct: 473 LLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPD 532

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN---DIFVGSALIEMYCKCGDIYGARQ 561
           + SF T+L++C        G Q    +E+D  ++   D +  + LI++  + G I  AR 
Sbjct: 533 RISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHY--ARLIDLLGRAGRIGEARD 590

Query: 562 FFDMMHGKNT-VTWNEMIHGYAQNGYGDEAVRLY-KDMIASGVKPDDITFVAILTACSHS 619
               M  + T   W  ++ G   N  GD  +  Y  D +   V   D T++ +    S +
Sbjct: 591 LIKTMPFEPTPAIWEAILSGCRIN--GDMELGAYAADQLFKMVPEHDGTYILLSNTYSAA 648

Query: 620 G 620
           G
Sbjct: 649 G 649



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 181/418 (43%), Gaps = 65/418 (15%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N L+ LYSK      A  +FD M  KD+ SWN ILS   +S  L+ A ++F EMP ++ +
Sbjct: 339 NALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSEL 398

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  ++S  V  GL E AL ++N+M +E   P   T A    A   L  ++HG++ H  +
Sbjct: 399 SWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHL 458

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           ++ G + +    NALL++YA+CG  K A  VF  M   + V++ AM+S L +     EAL
Sbjct: 459 VQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREAL 518

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
           E+F  M+ + +  D +S  ++L  C   G           D+ F      Q    +    
Sbjct: 519 ELFDQMVAQGIYPDRISFLTILTACNHAGL---------VDDGF------QYFESMERDF 563

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           G          L+D+  + G +  A  +   +P                           
Sbjct: 564 GISPGEDHYARLIDLLGRAGRIGEARDLIKTMP--------------------------- 596

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----EMFDSMPSPSVSSWNAMLSSYSQS 382
                  FEP       +L  C  +GD++ G     ++F  +P     ++  + ++YS +
Sbjct: 597 -------FEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHD-GTYILLSNTYSAA 648

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
               +A ++ + M+ RGVK +          C+    +E G +VH   +    H D +
Sbjct: 649 GRWVDAARVRKLMRDRGVKKE--------PGCS---WIEVGNKVHVFLVGDTKHPDAH 695



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHAH+++ G        N L+ +Y++C     A+ +F  MP+ D  SWNA++SA  +
Sbjct: 451 GKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQ 510

Query: 67  SDDLEFAYKLFDEM------PERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVP 118
                 A +LFD+M      P+R  +S+  +++A    GL +     +  M  + G  P
Sbjct: 511 HGHGREALELFDQMVAQGIYPDR--ISFLTILTACNHAGLVDDGFQYFESMERDFGISP 567


>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 176/513 (34%), Positives = 271/513 (52%), Gaps = 38/513 (7%)

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY-QSTKAIELLQRMK 330
           +H  NS L   A   D   A V FSN+ + +  S+NVMI G    + +S+ A+E   RMK
Sbjct: 60  IHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMK 119

Query: 331 SCGFEPDEVTSINMLVAC-----------------------------------VRSGDIK 355
             G +P+ +T   + +AC                                    R G + 
Sbjct: 120 FLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMG 179

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
             R++FD +    + SWN+M+S YS+  +  EA+ LFREM   G +P+  +L  +L +C 
Sbjct: 180 DARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACG 239

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
            +G L+ G  V    ++    ++ ++ S LI +Y KC     A R+F  + + D V WN+
Sbjct: 240 ELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNA 299

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MI G + N +  EA   F+ MR +   P Q +   +LS+CA + +   G+QV     + G
Sbjct: 300 MITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERG 359

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
           + +D++VG+AL++MY KCG +  A + F  M  KN V+WN MI   A +G   EA+ L+K
Sbjct: 360 FQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFK 419

Query: 596 DMIASG--VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
            M+  G  V P+DITFV +L+AC H+GLVD G  +F+ M    G+ P ++HY+CM+D   
Sbjct: 420 SMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFS 479

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           RAGH  EA   +  MP K D VI   LL +C+   N+ +++R  + L  L+P NS  Y +
Sbjct: 480 RAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVI 539

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            + +Y++L RWDD   +R LM +  + K P  S
Sbjct: 540 SSKLYANLRRWDDSARMRMLMKQKGVSKTPGCS 572



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 229/484 (47%), Gaps = 59/484 (12%)

Query: 25  LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERN 84
           L ++   L  +C +    + +  ++    I+  N+ L       D  +A   F  + +  
Sbjct: 31  LSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNILDPT 90

Query: 85  VVSWNNLISALVRNGLEEK-ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
             S+N +I  L     +   AL  Y++M   G  P ++T   +F A + LL VE+GR  H
Sbjct: 91  EYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGH 150

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
             VI+ GLD++ +V+++L+++YA+CG    A  VF+E+S+ + V++ +M+SG +K     
Sbjct: 151 CSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAG 210

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           EA+ +FR M+      + +SL SVLG C   G           D K      G  V    
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELG-----------DLKL-----GTWVEEFV 254

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
           ++     +  + ++L+ MY K GD+ SA  IF ++ ++  V+WN MI GY Q   S +AI
Sbjct: 255 VENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAI 314

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------------ 359
           +L Q M+     PD++T I +L AC   G +  G++                        
Sbjct: 315 KLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMY 374

Query: 360 -----------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG--VKPDRTT 406
                      +F  MP  +  SWNAM+S+ +     +EA+ LF+ M   G  V P+  T
Sbjct: 375 AKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDIT 434

Query: 407 LAIILSSCAAMGILESGKQVH---AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
              +LS+C   G+++ G+++    ++S      I++Y  S ++ ++S+    E A     
Sbjct: 435 FVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHY--SCMVDLFSRAGHLEEAWDFVM 492

Query: 464 RIPE 467
            +PE
Sbjct: 493 TMPE 496



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 231/463 (49%), Gaps = 60/463 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G++ H  ++R GL +D  + + LI +Y++C     A+                       
Sbjct: 146 GRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDAR----------------------- 182

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   K+FDE+ ++++VSWN++IS   +     +A+ ++ +M   GF P  ++L SV
Sbjct: 183 --------KVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSV 234

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L D++ G      V++  +  N ++ +AL+ +Y KCG    A  +F+ M + ++
Sbjct: 235 LGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDK 294

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           VT+ AM++G A+     EA+++F+ M   + + D ++L  +L  CA  G     D+    
Sbjct: 295 VTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGA---LDL---- 347

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+QV     + GF+ D+++  +L+DMYAK G +D+A  +F  +P+++ VSW
Sbjct: 348 ---------GKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSW 398

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCG--FEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           N MI+      Q+ +A+ L + M + G    P+++T + +L ACV +G +  GR +F  M
Sbjct: 399 NAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMM 458

Query: 365 PS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
            S     P +  ++ M+  +S++ + +EA      M     KPD   L  +L +C     
Sbjct: 459 SSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMP---EKPDEVILGALLGACQKRKN 515

Query: 420 LESGKQVHAASLK-TASHIDNYVASGLIGIYSKCQRNELAERV 461
           ++  ++V    L+   S+  NYV S    +Y+  +R + + R+
Sbjct: 516 IDISERVMKLLLELEPSNSGNYVISS--KLYANLRRWDDSARM 556


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 179/527 (33%), Positives = 278/527 (52%), Gaps = 38/527 (7%)

Query: 258 QVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           Q+H   ++LG    ++  S SL+  Y + G +  A  +F  +PER V +WN M++G  + 
Sbjct: 87  QLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRN 146

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD-----------IKTGRE------ 359
            ++  A+ LL RM   G   D VT  ++L  CV  GD           +K G        
Sbjct: 147 TRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVC 206

Query: 360 ------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                             +F  M    + +WN+++S+  Q      A++LF  M   GV 
Sbjct: 207 NALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVC 266

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELAER 460
           PD  TL  + S+ A  G     K VH    +    + + +A + ++ +Y+K  + + A++
Sbjct: 267 PDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQK 326

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLS 519
           VF  +P+ D+V WN++I G   N L  EA   +  M  +E + P Q +F +VL + + L 
Sbjct: 327 VFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLG 386

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
              QG ++HA   K G   D++V + LI++Y KCG +  A   F+ M  ++T  WN +I 
Sbjct: 387 GLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIA 446

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G   +G+G +A+ L+  M    +KPD +TFV++L ACSH+GLVD G   F+ MQ  +G+ 
Sbjct: 447 GLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIV 506

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           PI  HYTCM+D LGRAG   EA   I  MP K D  +W  LL +CR+H NV + K A++ 
Sbjct: 507 PIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQN 566

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           LF LDP+N   Y L++N+Y+ +G+WD + AVR L+    + K P +S
Sbjct: 567 LFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWS 613



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 246/539 (45%), Gaps = 98/539 (18%)

Query: 141 RCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           + H   +++GL   N++ + +L+  Y + G    A  VF+EM E +   + AM+SGL + 
Sbjct: 87  QLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRN 146

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
            R  +A+ +   M+ + V+ D+V+LSSVL +C   G           D   +       +
Sbjct: 147 TRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLG-----------DRALAL-----VM 190

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           H   +K G   +L + N+L+D+Y K G +  A  +F  +  R +V+WN +I+   Q  + 
Sbjct: 191 HVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKV 250

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD-------------------------- 353
             A+EL   M   G  PD +T +++  A  + GD                          
Sbjct: 251 AAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNA 310

Query: 354 ----------IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ-FRGVKP 402
                     I   +++FD++P   V SWN +++ Y Q+    EAI+++ +M    G+KP
Sbjct: 311 MVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKP 370

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
            + T   +L + + +G L+ G ++HA S+KT  ++D YV + LI +Y+KC +   A  +F
Sbjct: 371 IQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLF 430

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             +P      WN++IAGL ++    +A   F QM+Q E+ P   +F ++L++C+      
Sbjct: 431 EHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACS------ 484

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT-----WNEM 577
                HA +   G                        R FFD+M     +      +  M
Sbjct: 485 -----HAGLVDQG------------------------RSFFDLMQTVYGIVPIAKHYTCM 515

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG-VEIFNSMQLD 635
           +    + G  DEA    + M    +KPD   + A+L AC   G V++G V   N  +LD
Sbjct: 516 VDMLGRAGQLDEAFEFIQSM---PIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELD 571



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 201/411 (48%), Gaps = 53/411 (12%)

Query: 51  HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
           H ++++  +++ A  +   +  AY++FDEMPER+V +WN ++S L RN     A+++  +
Sbjct: 99  HPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGR 158

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M  EG     +TL+SV      L D       H   +K GL   ++V NAL+ +Y K G 
Sbjct: 159 MVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGM 218

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              A  VF  M+  + VT+ +++S   +  +V  A+E+F  M+   V  D ++L S+   
Sbjct: 219 LTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASA 278

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE-ADLHLSNSLLDMYAKNGDMD 289
            A+  CG E              +  + VHC   + G++  D+   N+++DMYAK   +D
Sbjct: 279 VAQ--CGDE--------------LGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKID 322

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC-GFEPDEVTSINMLVAC 348
           +A+ +F NLP+R VVSWN +I GY Q   + +AI +   M +  G +P + T +++L A 
Sbjct: 323 AAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAY 382

Query: 349 VRSGDIKTGREM-----------------------------------FDSMPSPSVSSWN 373
              G ++ G  M                                   F+ MP  S   WN
Sbjct: 383 SYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWN 442

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           A+++      +  +A+ LF +MQ   +KPD  T   +L++C+  G+++ G+
Sbjct: 443 AIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGR 493



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 189/423 (44%), Gaps = 57/423 (13%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           ++H + +++GL  + F+CN LI++Y K      A  +F  M  +D+ +WN+I+SA  +  
Sbjct: 189 VMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGG 248

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
            +  A +LF  M E                                G  P  +TL S+  
Sbjct: 249 KVAAAVELFHGMME-------------------------------SGVCPDVLTLVSLAS 277

Query: 129 ASTALLDVEHGRRCHGLVIKIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           A     D    +  H  V + G D  +I   NA++ +YAK      A  VF+ + + + V
Sbjct: 278 AVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVV 337

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           ++  +++G  +     EA+ ++  M   + +     +  SVL   +  G G++       
Sbjct: 338 SWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLG-GLQ------- 389

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G ++H L+IK G   D++++  L+D+YAK G +  A  +F ++P RS   W
Sbjct: 390 --------QGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPW 441

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N +IAG G      KA+ L  +M+    +PD VT +++L AC  +G +  GR  FD M +
Sbjct: 442 NAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQT 501

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P    +  M+    ++    EA +  + M    +KPD      +L +C   G +E
Sbjct: 502 VYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMP---IKPDSAVWGALLGACRIHGNVE 558

Query: 422 SGK 424
            GK
Sbjct: 559 MGK 561



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 126/240 (52%), Gaps = 7/240 (2%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK-----DIYS 56
           K   A +L H  ++ +G+  D      L    ++C +   A+ +   +  +     DI +
Sbjct: 249 KVAAAVELFHG-MMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIA 307

Query: 57  WNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN-EG 115
            NA++    K   ++ A K+FD +P+R+VVSWN LI+  ++NGL  +A+ +YN M N EG
Sbjct: 308 GNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEG 367

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
             P   T  SV  A + L  ++ G R H L IK GL+ ++YV   L+ LYAKCG    A+
Sbjct: 368 LKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAM 427

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            +FE M   +   + A+++GL       +AL +F  M ++ +  D V+  S+L  C+  G
Sbjct: 428 FLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAG 487



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 9/287 (3%)

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG-LIGIYSKCQRNELA 458
           ++PD  T   ++ +        S  Q+HA +L+      N  ASG L+  Y +  R   A
Sbjct: 65  LRPDSFTFPPLVRAAPGPA---SAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            RVF  +PE D+  WN+M++GL  N+   +A     +M    +     + ++VL  C  L
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
                   +H    K G   ++FV +ALI++Y K G +  A   F  M  ++ VTWN +I
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG- 637
               Q G    AV L+  M+ SGV PD +T V++ +A +  G  ++G +  +      G 
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCG-DELGAKSVHCYVRRRGW 300

Query: 638 -VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            V  I+     M+D   +      A+ + D +P + D V W  L++ 
Sbjct: 301 DVGDIIAG-NAMVDMYAKMSKIDAAQKVFDNLPDR-DVVSWNTLITG 345


>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Vitis vinifera]
          Length = 681

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 215/711 (30%), Positives = 348/711 (48%), Gaps = 120/711 (16%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+Y+ N  +S   ++  +  A  LFD MP+RN+V+WN++I+  VR     KA  ++++M 
Sbjct: 66  DLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMP 125

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG--W 170
                                                  D+++   N ++S Y  C   W
Sbjct: 126 ---------------------------------------DRDVVSWNLMISGYVSCQGRW 146

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            +    +F+EM E + V++  M+SG  ++ R+ EAL++F  M  + V    VS ++++  
Sbjct: 147 VEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNV----VSWNAMV-- 200

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
                              F +N   ++     +++  E D    ++L+    +NG++D 
Sbjct: 201 -----------------TGFLQNGDVERAIEFFMRMP-ERDSASLSALVAGLIQNGELDE 242

Query: 291 AEVIFSNLPERS------VVSWNVMIAGYGQKYQSTKAIELLQRM-------KSCGFEPD 337
           A+ I      +       V ++N+++AGYGQ  +  KA +L  ++       K  G    
Sbjct: 243 AKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFER 302

Query: 338 EVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
            V S N ++ C V++ DI + R +FD M      SWN M+S Y +  + +EA  LF+EM 
Sbjct: 303 NVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMP 362

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
                PD  T   ++S  A  G LE                                   
Sbjct: 363 ----NPDTLTWNSMISGFAQKGNLE----------------------------------- 383

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
           LA  +F  IP+ ++V WNSMIAG   N     A   ++QM      P + + ++VLS C+
Sbjct: 384 LARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCS 443

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH-GKNTVTWN 575
             ++   G Q+H QI K   + DI + ++LI MY +CG I  AR  FD +   K  ++WN
Sbjct: 444 GFAALHLGMQIHQQITKT-VIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWN 502

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI GYA +G+  +A+ L++ M    V+P  ITF+++L AC+H+G V  G   F SM  +
Sbjct: 503 AMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFKSMACE 562

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
            G+EP ++H+  ++D +GR G   EA  LI+ MP + D  +W  LL +CR+H NV LA+ 
Sbjct: 563 FGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRVHNNVELARV 622

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           AAE L +L+P++SAPY LL N+Y+ +G+WD+   +R +M  N I K P YS
Sbjct: 623 AAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPGYS 673



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 255/546 (46%), Gaps = 88/546 (16%)

Query: 16  RNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYK 75
           +N +  D +  N+ I    +    + A+ LFD MP ++I +WN++++   +  ++  A K
Sbjct: 60  KNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARK 119

Query: 76  LFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD 135
           LFDEMP+R+VVSWN +IS  V         S   +   EG                 L D
Sbjct: 120 LFDEMPDRDVVSWNLMISGYV---------SCQGRWVEEG---------------RHLFD 155

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
               R C                N ++S Y + G    A+ +F+ M E N V++ AM++G
Sbjct: 156 EMPERDCVSW-------------NTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTG 202

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF-----AQSDNKF 250
             +   V  A+E F  M  +    DS SLS+++    + G   E+         Q D+K 
Sbjct: 203 FLQNGDVERAIEFFMRMPER----DSASLSALVAGLIQNGELDEAKRILLTSRRQDDDK- 257

Query: 251 SRNVHGQQVHCLTIKLG------------------------------FEADLHLSNSLLD 280
                G  VH   I L                               FE ++   NS++ 
Sbjct: 258 -----GDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIM 312

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
            Y K  D+ SA V+F  + ER  +SWN MI+GY +     +A  L Q M +    PD +T
Sbjct: 313 CYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPN----PDTLT 368

Query: 341 SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
             +M+    + G+++  R +F ++P  ++ SWN+M++ Y  + ++K A +L+R+M  +G 
Sbjct: 369 WNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGE 428

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           KPDR TL+ +LS C+    L  G Q+H    KT    D  + + LI +YS+C     A  
Sbjct: 429 KPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIP-DIPINNSLITMYSRCGAIVEART 487

Query: 461 VFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           +F  +  + +++ WN+MI G + +    +A   F+ M++ ++ PT  +F +VL++CA   
Sbjct: 488 IFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAG 547

Query: 520 SSFQGR 525
              +GR
Sbjct: 548 FVKEGR 553



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 216/481 (44%), Gaps = 68/481 (14%)

Query: 259 VHCLTIKL-----GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
           +HC    L         DL+  N  +    +NG ++ A  +F  +P+R++V+WN MI GY
Sbjct: 49  LHCFVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGY 108

Query: 314 GQKYQSTKAIELLQRMKSCGFEPD-EVTSINMLVACVRSGD---IKTGREMFDSMPSPSV 369
            ++ +  KA +L   M      PD +V S N++++   S     ++ GR +FD MP    
Sbjct: 109 VRRREMAKARKLFDEM------PDRDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDC 162

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGV---------------------------KP 402
            SWN M+S Y++S    EA++LF  MQ R V                           + 
Sbjct: 163 VSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPER 222

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG--LIGIYSKCQRNELAER 460
           D  +L+ +++     G L+  K++   S +      + V +   L+  Y +  R + A +
Sbjct: 223 DSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQ 282

Query: 461 VFHRIP------------ELDIVCWNSMIAGLSLNSLDI-EAFMFFKQMRQNEMYPTQFS 507
           +F +IP            E ++V WNSMI    + + DI  A + F QM++ +      S
Sbjct: 283 LFDQIPFYDGGQKDGGRFERNVVSWNSMIM-CYVKARDIFSARVLFDQMKERD----TIS 337

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           + T++S   ++S   +   +  ++       D    +++I  + + G++  AR  F  + 
Sbjct: 338 WNTMISGYVRMSDMEEAWMLFQEMPNP----DTLTWNSMISGFAQKGNLELARALFATIP 393

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            KN V+WN MI GY  NG    A  LY+ M+  G KPD  T  ++L+ CS    + +G++
Sbjct: 394 QKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQ 453

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           I    Q+   V P +     +I    R G   EA  + DE+  + + + W  ++     H
Sbjct: 454 IHQ--QITKTVIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFH 511

Query: 688 A 688
            
Sbjct: 512 G 512



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 126/521 (24%), Positives = 225/521 (43%), Gaps = 90/521 (17%)

Query: 19  LFD-----DTFLCNRLIELYSKCNN--THSAQHLFDKMPHKDIYSWNAILSAQCKSDDLE 71
           LFD     D    N +I  Y  C        +HLFD+MP +D  SWN ++S   +S  ++
Sbjct: 120 LFDEMPDRDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMD 179

Query: 72  FAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAST 131
            A +LFD M ERNVVSWN +++  ++NG  E+A+  + +M           +A + +   
Sbjct: 180 EALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNG- 238

Query: 132 ALLDVEHGRRCHGLVIKIGLDKN--IYVANALLSLYAKCGWTKHAVPVFEEMS------- 182
              +++  +R      +   DK   ++  N LL+ Y + G    A  +F+++        
Sbjct: 239 ---ELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQK 295

Query: 183 -----EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
                E N V++ +M+    K   +  A  +F  M  +    D++S ++++    R    
Sbjct: 296 DGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKER----DTISWNTMISGYVRMSDM 351

Query: 238 VES-DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
            E+  +F +  N                      D    NS++  +A+ G+++ A  +F+
Sbjct: 352 EEAWMLFQEMPN---------------------PDTLTWNSMISGFAQKGNLELARALFA 390

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------- 348
            +P++++VSWN MIAGY        A EL ++M   G +PD  T  ++L  C        
Sbjct: 391 TIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHL 450

Query: 349 --------------------------VRSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQ 381
                                      R G I   R +FD +     V SWNAM+  Y+ 
Sbjct: 451 GMQIHQQITKTVIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAF 510

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
                +A++LF  M+   V+P   T   +L++CA  G ++ G+ +H  S+     I+  +
Sbjct: 511 HGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGR-MHFKSMACEFGIEPRI 569

Query: 442 A--SGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
              + L+ I  +  + E A  + + +P E D   W +++  
Sbjct: 570 EHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGA 610


>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
          Length = 667

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 186/625 (29%), Positives = 310/625 (49%), Gaps = 59/625 (9%)

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFT-AMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           L  +Y  CG    A  +  +M +P  V+F+ +++          EAL ++  M     + 
Sbjct: 51  LFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAM----RAF 106

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           D ++       CA                      HG+ VHC  +  GF  D ++ N+L+
Sbjct: 107 DHLTFPFAAKACA----------------GLRLGRHGRAVHCRALAAGFGGDTYVQNALI 150

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
            MY   GD+ +AE +F  +  R+VVSWN +IAG  +   + +A+E+   M + G   D  
Sbjct: 151 SMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRA 210

Query: 340 TSINMLVACVRSGDIKTGR----------------------EMFDSMPS----------- 366
           T +++L AC ++ D+ TGR                      +M+    S           
Sbjct: 211 TVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHC 270

Query: 367 ---PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK-PDRTTLAIILSSCAAMGILES 422
                V SW AM+ +Y  ++   EAI L  +M   G   P+  T+  +LS+CA+M   + 
Sbjct: 271 KHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKH 330

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
            K  HA  ++     D  V + LI  Y++C + +L      R        WN+ ++G ++
Sbjct: 331 AKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLER-GSWRAETWNAALSGYTV 389

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           +  + +A   FK+M    + P   + A++L + A+ +   +G+ +H  +   G++    +
Sbjct: 390 SGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEI 449

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            + LI++Y K GD+  A   F  +  K+ V W  +I GY  +G+   A+ LY  M+ SG 
Sbjct: 450 ATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGG 509

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
           KP+ +T   +L ACSH+G++D G+++F  M+  HG+ P  +HY+C++D LGRAG   EA 
Sbjct: 510 KPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAH 569

Query: 663 MLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
            LI +MP +    +W  LL +C LH NV   + AA+ LF+LDP+N+  Y LL NIY++  
Sbjct: 570 RLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAAD 629

Query: 723 RWDDLRAVRELMSENCIVKDPAYSL 747
           RW D++ VR +M E  ++K+P  SL
Sbjct: 630 RWRDVQDVRRMMVERGLLKEPGSSL 654



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 158/553 (28%), Positives = 246/553 (44%), Gaps = 59/553 (10%)

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNN-LISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
           C       A+ L  +MP+   VS++N L+ +    G   +AL+VY+ M    F   H+T 
Sbjct: 56  CACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAM--RAF--DHLTF 111

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
               KA   L    HGR  H   +  G   + YV NAL+S+Y  CG    A  VF  M  
Sbjct: 112 PFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRN 171

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
              V++ A+++G  K      ALE+F  M    V ID  ++ SVL  CA+          
Sbjct: 172 RTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQ---------- 221

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERS 302
           A+  N       G+ VH L    G    + + N+L+DMY K   ++ A  +F +   ++ 
Sbjct: 222 AKDLNT------GRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKD 275

Query: 303 VVSWNVMIAGYGQKYQSTKAIEL-LQRMKSCGFEPDEVTSINMLVA-------------- 347
           VVSW  MI  Y    ++ +AI L  Q + S    P+ VT + +L A              
Sbjct: 276 VVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTH 335

Query: 348 --CVRSG---DIKTGREMFDSMP---------------SPSVSSWNAMLSSYSQSENHKE 387
             C+R G   DI     + D+                 S    +WNA LS Y+ S   K+
Sbjct: 336 ALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAETWNAALSGYTVSGREKK 395

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           AI+LF+ M    V+PD  T+A IL + A    L+ GK +H   L         +A+GLI 
Sbjct: 396 AIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLID 455

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +YSK    + A  +F  +PE D+V W ++IAG  ++     A + + +M ++   P   +
Sbjct: 456 VYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVT 515

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEK-DGYVNDIFVGSALIEMYCKCGDIYGARQFF-DM 565
            AT+L +C+      +G +V   +    G + +    S L++M  + G I  A +   DM
Sbjct: 516 IATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDM 575

Query: 566 MHGKNTVTWNEMI 578
               +T  W  ++
Sbjct: 576 PFEPSTSVWGALL 588



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 200/414 (48%), Gaps = 56/414 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +   GL D   + N LI++Y KC +   A+ +FD                 CK
Sbjct: 228 GRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFD----------------HCK 271

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLAS 125
            D              ++VVSW  +I A V N    +A+S+  +M   G   P  +T+  
Sbjct: 272 HD--------------KDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVY 317

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A  ++   +H +  H L I++GL  +I V  AL+  YA+CG  K      E  S   
Sbjct: 318 LLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRA 377

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           E T+ A +SG   + R  +A+E+F+ MI ++V  DS +++S+L              +A+
Sbjct: 378 E-TWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASIL------------PAYAE 424

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S +       G+ +HC  + LGF     ++  L+D+Y+K GD+D+A  +F  LPE+ VV+
Sbjct: 425 SADL----KEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVA 480

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  +IAGYG    +  AI L  RM   G +P+ VT   +L AC  +G I  G ++F  M 
Sbjct: 481 WTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMR 540

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +     P+   ++ ++    ++   +EA +L ++M F   +P  +    +L +C
Sbjct: 541 NVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPF---EPSTSVWGALLGAC 591



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 210/474 (44%), Gaps = 64/474 (13%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D Y  NA++S      D+  A  +F  M  R VVSWN +I+  V+NG  E+AL V+ +M+
Sbjct: 142 DTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMA 201

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            +G      T+ SV  A     D+  GR  H LV   GL   + V NAL+ +Y KC   +
Sbjct: 202 ADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLE 261

Query: 173 HAVPVFEEMSEPNE-VTFTAMMSGLAKTDRVVEALEM-FRLMIRKAVSIDSVSLSSVLGV 230
            A  VF+      + V++TAM+      DR  EA+ +  ++++  A   + V++  +L  
Sbjct: 262 DARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSA 321

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CA    G                 H +  H L I+LG ++D+ +  +L+D YA+ G M  
Sbjct: 322 CASMPSG----------------KHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKL 365

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
             +       R+  +WN  ++GY    +  KAIEL +RM +    PD  T  ++L A   
Sbjct: 366 MRLTLERGSWRA-ETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAE 424

Query: 351 SGDIKTGRE-----------------------------------MFDSMPSPSVSSWNAM 375
           S D+K G+                                    +F  +P   V +W  +
Sbjct: 425 SADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTI 484

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           ++ Y    + + AI L+  M   G KP+  T+A +L +C+  G+++ G +V     K   
Sbjct: 485 IAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKV----FKDMR 540

Query: 436 HIDNYVASG-----LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
           ++   + +G     L+ +  +  R E A R+   +P E     W +++    L+
Sbjct: 541 NVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLH 594



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 19/223 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  +L  G    T +   LI++YSK  +  +A  LF  +P KD+ +W  I++    
Sbjct: 431 GKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGI 490

Query: 67  SDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFVPTHI 121
                 A  L+D M E     N V+   L+ A    G+ ++ + V+  M N  G +P   
Sbjct: 491 HGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNG- 549

Query: 122 TLASVFKASTALLDV--EHGR--RCHGLVIKIGLDKNIYVANALLS---LYAKCGWTKHA 174
                 +  + L+D+    GR    H L+  +  + +  V  ALL    L+    + + A
Sbjct: 550 ------EHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVA 603

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
                ++   N  ++  + +  A  DR  +  ++ R+M+ + +
Sbjct: 604 AKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGL 646


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 183/641 (28%), Positives = 320/641 (49%), Gaps = 82/641 (12%)

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           + H  ++K G   + Y++  L++ Y+       A  V + + +P   +F++++  L K  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95

Query: 201 RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
              +++ +F  M    +  DS  L ++  VCA                + S    G+Q+H
Sbjct: 96  LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCA----------------ELSAFKVGKQIH 139

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
           C++   G + D  +  S+  MY + G M  A  +F  + ++ VV+ + ++  Y +K    
Sbjct: 140 CVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLE 199

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
           + + +L  M+S G E +                               + SWN +LS ++
Sbjct: 200 EVVRILSEMESSGIEAN-------------------------------IVSWNGILSGFN 228

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           +S  HKEA+ +F+++   G  PD+ T++ +L S     +L  G+ +H   +K     D  
Sbjct: 229 RSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKC 288

Query: 441 VASGLIGIYSKC----------------------------QRNELAERVFH-------RI 465
           V S +I +Y K                              RN L ++          + 
Sbjct: 289 VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
            EL++V W S+IAG + N  DIEA   F++M+   + P   +  ++L +C  +++   GR
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGR 408

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
             H    +   ++++ VGSALI+MY KCG I  ++  F+MM  KN V WN +++G++ +G
Sbjct: 409 STHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHG 468

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
              E + +++ ++ + +KPD I+F ++L+AC   GL D G + F  M  ++G++P L+HY
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
           +CM++ LGRAG   EA  LI EMP + D  +W  LL+SCRL  NV LA+ AAE+LF L+P
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEP 588

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +N   Y LL+NIY++ G W ++ ++R  M    + K+P  S
Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 222/440 (50%), Gaps = 31/440 (7%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A   GK +H     +GL  D F+   +  +Y +C     A+ +FD+M  KD+ + +A+L 
Sbjct: 131 AFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLC 190

Query: 63  AQCKSDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
           A  +   LE   ++  EM     E N+VSWN ++S   R+G  ++A+ ++ K+ + GF P
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
             +T++SV  +      +  GR  HG VIK GL K+  V +A++ +Y K G     + +F
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            +          A ++GL++   V +ALEMF L   + + ++ VS +S++  CA+ G  +
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370

Query: 239 ES-DVFAQSD------------------NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           E+ ++F +                       +   HG+  H   +++    ++H+ ++L+
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
           DMYAK G ++ ++++F+ +P +++V WN ++ G+    ++ + + + + +     +PD +
Sbjct: 431 DMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490

Query: 340 TSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           +  ++L AC + G    G + F  M       P +  ++ M++   ++   +EA  L +E
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550

Query: 395 MQFRGVKPDRTTLAIILSSC 414
           M F   +PD      +L+SC
Sbjct: 551 MPF---EPDSCVWGALLNSC 567



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 124/571 (21%), Positives = 235/571 (41%), Gaps = 127/571 (22%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           HA IL++G  +D ++  +LI  YS  N  + A  +   +P   IYS+++           
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSS----------- 86

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
                               LI AL +  L  +++ V+++M + G +P    L ++FK  
Sbjct: 87  --------------------LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC 126

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
             L   + G++ H +    GLD + +V  ++  +Y +CG    A  VF+ MS+ + VT +
Sbjct: 127 AELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCS 186

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS---- 246
           A++   A+   + E + +   M    +  + VS + +L    R G   E+ V  Q     
Sbjct: 187 ALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL 246

Query: 247 ----DNKFSRNV-----------HGQQVHCLTIKLGFEADLHLSNSLLDMYAK------- 284
               D     +V            G+ +H   IK G   D  + ++++DMY K       
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGI 306

Query: 285 ------------------------NGDMDSAEVIFSNLPERS----VVSWNVMIAGYGQK 316
                                   NG +D A  +F    E++    VVSW  +IAG  Q 
Sbjct: 307 ISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQN 366

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------------------- 348
            +  +A+EL + M+  G +P+ VT  +ML AC                            
Sbjct: 367 GKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG 426

Query: 349 -------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                   + G I   + +F+ MP+ ++  WN++++ +S     KE + +F  +    +K
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486

Query: 402 PDRTTLAIILSSCAAMGILESGK---QVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           PD  +   +LS+C  +G+ + G    ++ +        +++Y  S ++ +  +  + + A
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY--SCMVNLLGRAGKLQEA 544

Query: 459 ERVFHRIP-ELDIVCWNSMIAGLSL-NSLDI 487
             +   +P E D   W +++    L N++D+
Sbjct: 545 YDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 172/359 (47%), Gaps = 32/359 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+H ++++ GL  D  + + +I++Y K  + +    LF++    +    NA ++   +
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330

Query: 67  SDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
           +  ++ A ++F+   E+    NVVSW ++I+   +NG + +AL ++ +M   G  P H+T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + S+  A   +  + HGR  HG  +++ L  N++V +AL+ +YAKCG    +  VF  M 
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-- 240
             N V + ++M+G +   +  E + +F  ++R  +  D +S +S+L  C + G   E   
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510

Query: 241 ---------------DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
                          + ++   N   R    Q+ + L  ++ FE D  +  +LL+     
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570

Query: 286 GDMDSAEVIFSNL-------PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
            ++D AE+    L       P   V+  N+    Y  K   T+   +  +M+S G + +
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNI----YAAKGMWTEVDSIRNKMESLGLKKN 625


>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 1113

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 208/674 (30%), Positives = 330/674 (48%), Gaps = 60/674 (8%)

Query: 96   VRNG----LEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
            V+NG    LEE++ S+ ++  N    P         K S +L       +    +IK G+
Sbjct: 425  VKNGWMNFLEERSYSMKSQRPN--LAP---------KGSNSLDANTEAIQIQNHLIKRGI 473

Query: 152  DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
            D+ +YV+ ALL LY K G   +A   F+ M   + V++ A++ G ++      ALE+F  
Sbjct: 474  DQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALELFVQ 533

Query: 212  MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
            M++        +L  +L       CG    VF            G+ +H   IK G   D
Sbjct: 534  MLKLGFCPRQTTLVGLL-----PSCGQLELVF-----------QGKSIHGFGIKSGLHLD 577

Query: 272  LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
              + N+L  MYAK GD+++AE +F  + ++SVVSWN MI  YGQ     +A+ + +RM  
Sbjct: 578  PQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIG 637

Query: 332  CGFEPDEVTSINMLVA---------------------------CV--RSGDIKTGREMFD 362
             G E  +VT +++  A                           C+  R G       ++ 
Sbjct: 638  AGVEVSQVTIMSLPSANANPESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYW 697

Query: 363  SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
            S+P  ++ S  A+++SY+++ N    ++ F +M    +KPD   +  IL   A    +  
Sbjct: 698  SLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICI 757

Query: 423  GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
            G   H  ++K+     N V +GLI +YSK    E    +F  + E  ++ WNS+I+G   
Sbjct: 758  GHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQ 817

Query: 483  NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
                  A   F QM+ +   P   + A++LS C++L     G ++H+ I ++    + FV
Sbjct: 818  AGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFV 877

Query: 543  GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            G+ALI MY KCG I  A + F  +      TWN MI GY+  G+  +A+  Y +M   GV
Sbjct: 878  GTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGV 937

Query: 603  KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
            +PD ITF+ +L AC+H GL+  G   F  M   + + P L H  CM+  L R G F EA 
Sbjct: 938  EPDKITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEAL 997

Query: 663  MLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
            + I  M  + D  +W   LS+C +H  V+L +  A++L+ LD +N   Y L++N+Y+  G
Sbjct: 998  LFIKNMEKEPDSAVWGAFLSACCIHQEVKLGEYLAKKLYLLDCRNGGLYVLMSNLYAVTG 1057

Query: 723  RWDDLRAVRELMSE 736
            RWDD+  VRE+M +
Sbjct: 1058 RWDDVARVREMMKD 1071



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 256/527 (48%), Gaps = 60/527 (11%)

Query: 38  NTHSAQ---HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISA 94
           NT + Q   HL  +   + +Y   A+L    K   + +A+  FD MP R+VVSWN LI  
Sbjct: 458 NTEAIQIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICG 517

Query: 95  LVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKN 154
             RNG +  AL ++ +M   GF P   TL  +  +   L  V  G+  HG  IK GL  +
Sbjct: 518 YSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLD 577

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
             V NAL S+YAKCG  + A  +FEEM + + V++  M+    +     EA+ +F+ MI 
Sbjct: 578 PQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIG 637

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
             V +  V++ S+                       S N + + +HC TIK+G   D  +
Sbjct: 638 AGVEVSQVTIMSLP----------------------SANANPESIHCYTIKVGLADDASV 675

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
             SL+ MYA+ G  D AE+++ +LP++++VS   +I  Y +       +E   +M     
Sbjct: 676 VTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNM 735

Query: 335 EPDEVTSINML----------VACVRSG-DIKTGRE------------------------ 359
           +PD V  +++L          +  V  G  IK+G +                        
Sbjct: 736 KPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFG 795

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F  M    + SWN+++S   Q+     AI+LF +M+  G  PD  T+A +LS C+ +G 
Sbjct: 796 LFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGY 855

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L+ G+++H+  L+    ++++V + LI +Y+KC     AERVF  I +  +  WN+MI+G
Sbjct: 856 LQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISG 915

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
            S    + +A   + +M++  + P + +F  VL++C       +GR+
Sbjct: 916 YSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACTHGGLIHEGRR 962



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 130/548 (23%), Positives = 237/548 (43%), Gaps = 129/548 (23%)

Query: 7    GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            GK +H   +++GL  D  + N L  +Y+KC +  +A++LF++M  K + SWN        
Sbjct: 562  GKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNT------- 614

Query: 67   SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    +I A  +NG  ++A+ V+ +M   G   + +T+ S+
Sbjct: 615  ------------------------MIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSL 650

Query: 127  FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
              A+       +    H   IK+GL  +  V  +L+ +YA+ G T HA  ++  + + N 
Sbjct: 651  PSANA------NPESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNL 704

Query: 187  VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            V+ TA+++  A+   +   +E F  M +  +  DSV++ S+L                  
Sbjct: 705  VSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSIL------------------ 746

Query: 247  DNKFSRNVH---GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
             +  +  VH   G   H   IK G +    ++N L+ MY+K  ++++   +FS + E+ +
Sbjct: 747  -HGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPL 805

Query: 304  VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
            +SWN +I+G  Q  +++ AIEL  +MK  G  PD +T  ++L  C + G ++ G  +   
Sbjct: 806  ISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSY 865

Query: 361  --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                            F S+  P +++WNAM+S YS      +A
Sbjct: 866  ILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKA 925

Query: 389  IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
            +  + EMQ +GV+PD+ T   +L++C   G++  G++                       
Sbjct: 926  LTCYSEMQEQGVEPDKITFLGVLAACTHGGLIHEGRRYF--------------------- 964

Query: 449  YSKCQRNELAERVFHRIPELD-IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
                   ++  +V+  +P L    C   M+  L+   L  EA +F K M +    P    
Sbjct: 965  -------QIMTKVYDMVPTLQHCAC---MVGLLARVGLFEEALLFIKNMEKE---PDSAV 1011

Query: 508  FATVLSSC 515
            +   LS+C
Sbjct: 1012 WGAFLSAC 1019


>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 753

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 201/651 (30%), Positives = 323/651 (49%), Gaps = 59/651 (9%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           G+  HG ++K  L+  +Y+ N LL++Y KC     A  +F+ M E N ++F +++SG  +
Sbjct: 67  GKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 126

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
                +A+E+F       + +D  + +  LG C  E C ++                G+ 
Sbjct: 127 VGFYEQAMELFLEARDDNLKLDKFTYAGALGFCG-ERCDLD---------------FGKL 170

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +H L +  G    + L N L+DMY+K G +D A  +F    ER  VSWN +I+GY +   
Sbjct: 171 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGA 230

Query: 319 STKAIELLQRM----------------KSC----------------------GFEPDEVT 340
           + + + LL +M                K+C                      G E D V 
Sbjct: 231 AEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVV 290

Query: 341 SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ-----SENHKEAIKLFREM 395
              +L    ++G +K   ++F  MP+ +V ++NAM+S + Q      E   EA KLF EM
Sbjct: 291 RTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEM 350

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
           Q RG++P  +T +++L +C+A   LE G+Q+HA   K     D ++ S LI +Y+     
Sbjct: 351 QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGST 410

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
           E   + F    + DI  W S+I     N     AF  F+Q+  + + P +++ + ++S+C
Sbjct: 411 EDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSAC 470

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           A  ++   G Q+     K G      V ++ I MY K G++  A + F  +   +  T++
Sbjct: 471 ADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYS 530

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI   AQ+G   +A+ +++ M   G+KP+   F+ +L AC H GLV  GV  F +M+  
Sbjct: 531 AMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHGVNYFQTMKNS 590

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           +G+ P   H+TC+ D LGR G   +AE LI     +D PV+W  LLSSCR++ +  + KR
Sbjct: 591 YGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDHPVMWRALLSSCRVYKDSVIGKR 650

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AE L  L+P+ S  Y LL NIY+  G       VRELM +  + K+PA S
Sbjct: 651 VAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALS 701



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 248/493 (50%), Gaps = 57/493 (11%)

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
           CK  +L FA +LFD MPERN++S+N+LIS   + G  E+A+ ++ +  ++       T A
Sbjct: 94  CKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYA 153

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
                     D++ G+  HGLV+  GL + +++ N L+ +Y+KCG    A+ +F+  +E 
Sbjct: 154 GALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNER 213

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           ++V++ +++SG  +     E L +   M R  + + + +L SVL  C    C   ++   
Sbjct: 214 DQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKAC----CINLNEGLM 269

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
           +          G  +HC   KLG E D+ +  +LLDMYAKNG +  A  +FS +P ++VV
Sbjct: 270 EK---------GMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVV 320

Query: 305 SWNVMIAGYGQ-----KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
           ++N MI+G+ Q        S++A +L   M+  G EP   T   +L AC  +  ++ GR+
Sbjct: 321 TYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQ 380

Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
           +                                   F S     ++SW +++  + Q+E 
Sbjct: 381 IHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQ 440

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY--VA 442
            + A  LFR++    ++P+  T+++++S+CA    L SG+Q+   ++K  S ID Y  V 
Sbjct: 441 LESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIK--SGIDAYTSVK 498

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           +  I +Y+K     LA +VF  +   D+  +++MI+ L+ +    +A   F+ M+   + 
Sbjct: 499 TSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIK 558

Query: 503 PTQFSFATVLSSC 515
           P Q +F  VL +C
Sbjct: 559 PNQQAFLGVLIAC 571



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 206/460 (44%), Gaps = 90/460 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GKLLH  ++ NGL    FL N LI++YSKC     A  LFD+   +D  SWN+       
Sbjct: 168 GKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNS------- 220

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LIS  VR G  E+ L++  KM   G   T   L SV
Sbjct: 221 ------------------------LISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSV 256

Query: 127 FKASTALLD---VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            KA    L+   +E G   H    K+G++ +I V  ALL +YAK G  K A+ +F  M  
Sbjct: 257 LKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPA 316

Query: 184 PNEVTFTAMMSGLAKTDRVV-----EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            N VT+ AM+SG  + D +      EA ++F  M R+ +     + S VL  C+     +
Sbjct: 317 KNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKT-L 375

Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
           E               +G+Q+H L  K  F++D  + ++L+++YA  G  +     F++ 
Sbjct: 376 E---------------YGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAST 420

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------- 348
            ++ + SW  +I  + Q  Q   A +L +++ S    P+E T   M+ AC          
Sbjct: 421 SKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGE 480

Query: 349 -------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
                                     +SG++    ++F  + +P V++++AM+SS +Q  
Sbjct: 481 QIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHG 540

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +  +A+ +F  M+ RG+KP++     +L +C   G++  G
Sbjct: 541 SAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHG 580



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 132/532 (24%), Positives = 240/532 (45%), Gaps = 53/532 (9%)

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA---QSDNKFSRNVHGQQVHC 261
           A E   ++I K V +    LSS+   C  +   ++S+ +    Q+  K    V G+  H 
Sbjct: 16  AQESLVILITKQVGLGYRFLSSL---CQPKNTALDSEAYKKLFQTAAKSGSLVLGKLAHG 72

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
             +K      L+L N+LL+MY K  ++  A  +F  +PER+++S+N +I+GY Q     +
Sbjct: 73  HMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQ 132

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----------------------- 358
           A+EL    +    + D+ T    L  C    D+  G+                       
Sbjct: 133 AMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLID 192

Query: 359 ------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
                        +FD        SWN+++S Y +    +E + L  +M   G+K     
Sbjct: 193 MYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYA 252

Query: 407 LAIILSSCAA---MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
           L  +L +C      G++E G  +H  + K     D  V + L+ +Y+K    + A ++F 
Sbjct: 253 LGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFS 312

Query: 464 RIPELDIVCWNSMIAGLSLNSLDI------EAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
            +P  ++V +N+MI+G  L   DI      EAF  F +M++  + P+  +F+ VL +C+ 
Sbjct: 313 LMPAKNVVTYNAMISGF-LQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSA 371

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
             +   GRQ+HA I K+ + +D F+GSALIE+Y   G      Q F     ++  +W  +
Sbjct: 372 AKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSI 431

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I  + QN   + A  L++ + +S ++P++ T   +++AC+    +  G +I     +  G
Sbjct: 432 IDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQI-QGYAIKSG 490

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           ++      T  I    ++G+   A  +  E+    D   +  ++SS   H +
Sbjct: 491 IDAYTSVKTSSISMYAKSGNMPLANKVFIEVQ-NPDVATYSAMISSLAQHGS 541



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 156/317 (49%), Gaps = 21/317 (6%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVR-----NGLEEKALSV 107
           DI    A+L    K+  L+ A KLF  MP +NVV++N +IS  ++     +    +A  +
Sbjct: 287 DIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKL 346

Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
           + +M   G  P+  T + V KA +A   +E+GR+ H L+ K     + ++ +AL+ LYA 
Sbjct: 347 FMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 406

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
            G T+  +  F   S+ +  ++T+++    + +++  A ++FR +    +  +  ++S +
Sbjct: 407 MGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLM 466

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           +  CA                 F+    G+Q+    IK G +A   +  S + MYAK+G+
Sbjct: 467 MSACA----------------DFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGN 510

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           M  A  +F  +    V +++ MI+   Q   +  A+ + + MK+ G +P++   + +L+A
Sbjct: 511 MPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIA 570

Query: 348 CVRSGDIKTGREMFDSM 364
           C   G +  G   F +M
Sbjct: 571 CCHGGLVTHGVNYFQTM 587



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 110/274 (40%), Gaps = 32/274 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA I +N    D F+ + LIELY+   +T      F     +DI            
Sbjct: 378 GRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDI------------ 425

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                               SW ++I   V+N   E A  ++ ++ +    P   T++ +
Sbjct: 426 -------------------ASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLM 466

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      +  G +  G  IK G+D    V  + +S+YAK G    A  VF E+  P+ 
Sbjct: 467 MSACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDV 526

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
            T++AM+S LA+     +AL +F  M  + +  +  +   VL  C   G      + F  
Sbjct: 527 ATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHGVNYFQT 586

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
             N +  N + +   CL   LG    L  + +L+
Sbjct: 587 MKNSYGINPNEKHFTCLADLLGRTGRLSDAENLI 620



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++  +  + AK  S   G+  H  + K      +++ + L+ MYCKC ++  ARQ FD M
Sbjct: 50  AYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRM 109

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
             +N +++N +I GY Q G+ ++A+ L+ +     +K D  T+   L  C     +D G 
Sbjct: 110 PERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFG- 168

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD-DPVIWEVLLSSCR 685
           ++ + + + +G+   +     +ID   + G   +A  L D   C + D V W  L+S   
Sbjct: 169 KLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR--CNERDQVSWNSLIS--- 223

Query: 686 LHANVRLAKRAAEELFRLDPK 706
               VR+   AAEE   L  K
Sbjct: 224 --GYVRVG--AAEEPLNLLAK 240


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 193/670 (28%), Positives = 336/670 (50%), Gaps = 58/670 (8%)

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNI-----YVANALLSLYAKCGWT 171
           +P H T+ S  +  +   ++   R  H L++ +G  +         A+ L+++Y   G  
Sbjct: 25  LPIHFTVTSFHRLKSPP-NLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSL 83

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
           +HA   F  +     + + A++ GL       +A+  +  M++  V+ D+ +   VL  C
Sbjct: 84  QHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKAC 143

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
                   S + A    +  R VH + +H  T     +A++++  +++DM+AK G ++ A
Sbjct: 144 --------SSLHAL---QLGRWVH-ETMHGKT-----KANVYVQCAVIDMFAKCGSVEDA 186

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--- 348
             +F  +P+R + SW  +I G     +  +A+ L ++M+S G  PD V   ++L AC   
Sbjct: 187 RRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRL 246

Query: 349 -------------VRSG-------------------DIKTGREMFDSMPSPSVSSWNAML 376
                        VRSG                   D      +F  M    V SW+ ++
Sbjct: 247 EAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLI 306

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           + YSQ+  ++E+ KL+  M   G+  +      +L +   + +L+ GK++H   LK    
Sbjct: 307 AGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLM 366

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D  V S LI +Y+ C   + AE +F    + DI+ WNSMI G +L      AF  F+++
Sbjct: 367 SDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRI 426

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
              E  P   +  ++L  C ++ +  QG+++H  + K G   ++ VG++LI+MY KCG +
Sbjct: 427 WGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFL 486

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
               + F  M  +N  T+N MI     +G G++ +  Y+ M   G +P+ +TF+++L+AC
Sbjct: 487 ELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSAC 546

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH+GL+D G  ++NSM  D+G+EP ++HY+CM+D +GRAG    A   I  MP   D  +
Sbjct: 547 SHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANV 606

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           +  LL +CRLH  V L +  AE + +L   +S  Y LL+N+Y+S  RW+D+  VR ++ +
Sbjct: 607 FGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKD 666

Query: 737 NCIVKDPAYS 746
             + K P  S
Sbjct: 667 KGLEKKPGSS 676



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 266/553 (48%), Gaps = 54/553 (9%)

Query: 50  PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN 109
           PH   ++ + +++       L+ A+  F  +P + +++WN ++  LV  G   KA+  Y+
Sbjct: 64  PHSSSFA-SQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYH 122

Query: 110 KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
            M   G  P + T   V KA ++L  ++ GR  H   +      N+YV  A++ ++AKCG
Sbjct: 123 SMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCG 181

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
             + A  +FEEM + +  ++TA++ G       +EAL +FR M  + +  DSV ++S+L 
Sbjct: 182 SVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILP 241

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            C R    +E+               G  +    ++ GFE+DL++SN+++DMY K GD  
Sbjct: 242 ACGR----LEAVKL------------GMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPL 285

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQK--YQ--------------STKAI---------- 323
            A  +FS++    VVSW+ +IAGY Q   YQ              +T AI          
Sbjct: 286 EAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALG 345

Query: 324 --ELLQRMKSC-------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNA 374
             ELL++ K         G   D V    ++V     G IK    +F+      +  WN+
Sbjct: 346 KLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNS 405

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+  Y+   + + A   FR +     +P+  T+  IL  C  MG L  GK++H    K+ 
Sbjct: 406 MIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSG 465

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             ++  V + LI +YSKC   EL E+VF ++   ++  +N+MI+    +    +   F++
Sbjct: 466 LGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYE 525

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKC 553
           QM++    P + +F ++LS+C+      +G  ++  +  D G   ++   S ++++  + 
Sbjct: 526 QMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRA 585

Query: 554 GDIYGARQFFDMM 566
           GD+ GA +F   M
Sbjct: 586 GDLDGAYKFITRM 598



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 211/448 (47%), Gaps = 54/448 (12%)

Query: 14  ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK---DIYSWNAILSAQCKSDDL 70
           +L++G+  D +    +++  S  +     + + + M  K   ++Y   A++    K   +
Sbjct: 124 MLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGSV 183

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
           E A ++F+EMP+R++ SW  LI   + NG   +AL ++ KM +EG +P  + +AS+  A 
Sbjct: 184 EDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPAC 243

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
             L  V+ G       ++ G + ++YV+NA++ +Y KCG    A  VF  M   + V+++
Sbjct: 244 GRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWS 303

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
            +++G ++     E+ +++  MI   ++ +++  +SVL                 +  K 
Sbjct: 304 TLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVL----------------PALGKL 347

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
                G+++H   +K G  +D+ + ++L+ MYA  G +  AE IF    ++ ++ WN MI
Sbjct: 348 ELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMI 407

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------- 360
            GY        A    +R+      P+ +T +++L  C + G ++ G+E+          
Sbjct: 408 VGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLG 467

Query: 361 -------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                                    F  M   +V+++N M+S+       ++ +  + +M
Sbjct: 468 LNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQM 527

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESG 423
           +  G +P++ T   +LS+C+  G+L+ G
Sbjct: 528 KEEGNRPNKVTFISLLSACSHAGLLDRG 555



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 184/413 (44%), Gaps = 55/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  L    +R+G   D ++ N +I++Y KC +   A  +F  M + D+ SW         
Sbjct: 252 GMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSW--------- 302

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                 + LI+   +N L +++  +Y  M N G     I   SV
Sbjct: 303 ----------------------STLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSV 340

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L  ++ G+  H  V+K GL  ++ V +AL+ +YA CG  K A  +FE  S+ + 
Sbjct: 341 LPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDI 400

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           + + +M+ G         A   FR +       + +++ S+L +C + G   +       
Sbjct: 401 MVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQ------- 453

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+++H    K G   ++ + NSL+DMY+K G ++  E +F  +  R+V ++
Sbjct: 454 ---------GKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTY 504

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N MI+  G   Q  K +   ++MK  G  P++VT I++L AC  +G +  G  +++SM +
Sbjct: 505 NTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMIN 564

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                P++  ++ M+    ++ +   A K    M    + PD      +L +C
Sbjct: 565 DYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMP---MTPDANVFGSLLGAC 614


>gi|302799100|ref|XP_002981309.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
 gi|300150849|gb|EFJ17497.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
          Length = 682

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 204/706 (28%), Positives = 338/706 (47%), Gaps = 72/706 (10%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K  D+E A ++F  +   N+ SW  +++A  RNG   +AL +  +M  EG  P  +   +
Sbjct: 4   KCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVCFVT 63

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYV-ANALLSLYAKCGWTKHAVPVFEEMSEP 184
           +     A  D+E G+  H  ++  G++ +  V  NAL+++Y KC     A   F+ M   
Sbjct: 64  ILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRMEHQ 123

Query: 185 NE----VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           +     VT+ ++++       + EA  +F+ M  + +   SV+L+ VL  C         
Sbjct: 124 DHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESC--------- 174

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
                     S +  G+  H   + LG + D  L NSL+ MYA+ G ++ + ++F  + +
Sbjct: 175 ----------SGDRQGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQ 224

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF-EPDEVTSINMLVACV---------- 349
           + ++SWNVMI+   +   S +A+ELL+ +   GF EPDEVT I+++ AC           
Sbjct: 225 KDIISWNVMISLEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFT 284

Query: 350 -------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                    +SG +   R  FD +P  +V SWN ++S Y+Q+  
Sbjct: 285 IQELVSSAGFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQ 344

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            +  ++LFR+M   GVK +  T   +L +C+ +  L+ G+++H         +   VA+ 
Sbjct: 345 GRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATA 404

Query: 445 LIGIYSKCQRNELAERVFHRIPEL---DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
           LI +Y KCQ  +LA+ +  R       D V WN++ A  + N   +EA   F +M+Q  +
Sbjct: 405 LINMYGKCQELQLAQELLERYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRMQQQGV 464

Query: 502 YPTQFSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
              + +F T+L +C   SS    GR +    +   + +D   G AL+ MY KCG +  A 
Sbjct: 465 RAQEATFVTILDACGDSSSLLAHGRSI---AKLSSWTSDAIKG-ALLGMYSKCGCVDDAL 520

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
                +  +  + W  M+  YA  G   EA+R+   M   GV PDD+ F A++ ACSH+G
Sbjct: 521 AALQSLSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAG 580

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
           L+   +     +  D+G       Y C++D L R G   EAE L+  MP + D + W  L
Sbjct: 581 LLHEALVRLAWVSGDYGTAMGAGLYECVVDVLARMGRLQEAEELMHAMPYEPDSLAWMAL 640

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDD 726
           L +C +H ++    R A     LD   S  Y LL+N+Y+S   W+D
Sbjct: 641 LGACTVHGDLERGARTAGHEALLD-SGSGRYVLLSNMYAS---WED 682



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 166/669 (24%), Positives = 293/669 (43%), Gaps = 142/669 (21%)

Query: 7   GKLLHAHILRNGLFDDT-FLCNRLIELYSKCNNTHSAQHLFDKMPH----KDIYSWNAIL 61
           GK+ HA IL  G+   +  L N LI +Y KC N   A+  FD+M H    +D+ +WN++L
Sbjct: 77  GKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRMEHQDHGRDVVTWNSLL 136

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +A                                  NG  E+A  ++ +M  EG  P+ +
Sbjct: 137 AA-------------------------------FTHNGYLEEAARLFQEMEVEGIKPSSV 165

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           TL  V ++ +       G+  H  V+ +GL  + ++ N+L+ +YA+CG  + +  VF  +
Sbjct: 166 TLTCVLESCSG---DRQGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAI 222

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFR-LMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            + + +++  M+S  A+     EA+E+ R + +      D V+  SV+  C+   C  + 
Sbjct: 223 DQKDIISWNVMISLEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACS---CLGDL 279

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIK-----LGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
           D+                  C TI+      GF+ DL L N++++M+ K+G +D+A   F
Sbjct: 280 DL------------------CFTIQELVSSAGFDDDLLLGNAVVNMFGKSGCLDAARATF 321

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
             LP ++VVSWN +I+GY Q  Q  + +EL ++M   G + + VT +++L AC     + 
Sbjct: 322 DRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPALD 381

Query: 356 TGREM--------------------------------------FDSMPSPSVSSWNAMLS 377
            GRE+                                      + S       +WNA+ +
Sbjct: 382 FGRELHLRITAAGLELHTVVATALINMYGKCQELQLAQELLERYQSTGLRDSVTWNAIAA 441

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA-AMGILESGKQVHAASLKTASH 436
           +Y+Q+ +  EA++LF  MQ +GV+    T   IL +C  +  +L  G+ +     K +S 
Sbjct: 442 AYAQNGHPLEALELFWRMQQQGVRAQEATFVTILDACGDSSSLLAHGRSIA----KLSSW 497

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
             + +   L+G+YSKC   + A      +    ++ W SM+A  +      EA     QM
Sbjct: 498 TSDAIKGALLGMYSKCGCVDDALAALQSLSSRGLLAWTSMLAAYAHVGRASEALRVLGQM 557

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           + + + P   +F+ V+ +C+           HA +  +          AL+ +    GD 
Sbjct: 558 QHDGVVPDDVAFSAVVFACS-----------HAGLLHE----------ALVRLAWVSGD- 595

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
           YG               +  ++   A+ G   EA  L   M A   +PD + ++A+L AC
Sbjct: 596 YGT--------AMGAGLYECVVDVLARMGRLQEAEEL---MHAMPYEPDSLAWMALLGAC 644

Query: 617 SHSGLVDVG 625
           +  G ++ G
Sbjct: 645 TVHGDLERG 653



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 228/497 (45%), Gaps = 57/497 (11%)

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           ++ KCG  + A  +F  +  PN  ++T +++  A+  R +EAL + R MI +    D V 
Sbjct: 1   MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH-LSNSLLDMY 282
             ++L +CA           A +D +      G+  H   +  G E+    L N+L++MY
Sbjct: 61  FVTILDLCA-----------ATADLE-----QGKVAHAWILACGVESSSRVLGNALINMY 104

Query: 283 AKNGDMDSAEVIFSNLPE----RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
            K  ++D A   F  +      R VV+WN ++A +       +A  L Q M+  G +P  
Sbjct: 105 GKCRNLDLARAQFDRMEHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSS 164

Query: 339 VTSINMLVAC--------------------------------VRSGDIKTGREMFDSMPS 366
           VT   +L +C                                 R G ++  R +F ++  
Sbjct: 165 VTLTCVLESCSGDRQGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQ 224

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV-KPDRTTLAIILSSCAAMGILESGKQ 425
             + SWN M+S  ++  + +EA++L RE+   G  +PD  T   ++ +C+ +G L+    
Sbjct: 225 KDIISWNVMISLEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFT 284

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +           D  + + ++ ++ K    + A   F R+P  ++V WN +I+G + N  
Sbjct: 285 IQELVSSAGFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQ 344

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
                  F+QM Q  +     +F ++L +C+ + +   GR++H +I   G      V +A
Sbjct: 345 GRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATA 404

Query: 546 LIEMYCKCGDIYGARQFFDMMHG---KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
           LI MY KC ++  A++  +       +++VTWN +   YAQNG+  EA+ L+  M   GV
Sbjct: 405 LINMYGKCQELQLAQELLERYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRMQQQGV 464

Query: 603 KPDDITFVAILTACSHS 619
           +  + TFV IL AC  S
Sbjct: 465 RAQEATFVTILDACGDS 481



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 181/393 (46%), Gaps = 32/393 (8%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+   NA+++   KS  L+ A   FD +P +NVVSWN LIS   +N    + L ++ +M 
Sbjct: 297 DLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMD 356

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            EG     +T  S+  A + +  ++ GR  H  +   GL+ +  VA AL+++Y KC   +
Sbjct: 357 QEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCQELQ 416

Query: 173 HAVPVFEEMSEP---NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
            A  + E        + VT+ A+ +  A+    +EALE+F  M ++ V     +  ++L 
Sbjct: 417 LAQELLERYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRMQQQGVRAQEATFVTIL- 475

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
               + CG  S + A          HG+ +     KL       +  +LL MY+K G +D
Sbjct: 476 ----DACGDSSSLLA----------HGRSI----AKLSSWTSDAIKGALLGMYSKCGCVD 517

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
            A     +L  R +++W  M+A Y    ++++A+ +L +M+  G  PD+V    ++ AC 
Sbjct: 518 DALAALQSLSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACS 577

Query: 350 RSG-----DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
            +G      ++      D   +     +  ++   ++    +EA +L   M +   +PD 
Sbjct: 578 HAGLLHEALVRLAWVSGDYGTAMGAGLYECVVDVLARMGRLQEAEELMHAMPY---EPDS 634

Query: 405 TTLAIILSSCAAMGILESGKQV--HAASLKTAS 435
                +L +C   G LE G +   H A L + S
Sbjct: 635 LAWMALLGACTVHGDLERGARTAGHEALLDSGS 667



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 18/298 (6%)

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           ++ KC   E+A  +FH +   ++  W  ++A  + N  ++EA +  ++M      P    
Sbjct: 1   MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV-GSALIEMYCKCGDIYGARQFFDMM 566
           F T+L  CA  +   QG+  HA I   G  +   V G+ALI MY KC ++  AR  FD M
Sbjct: 61  FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120

Query: 567 ----HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
               HG++ VTWN ++  +  NGY +EA RL+++M   G+KP  +T   +L +CS     
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCSG---- 176

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           D   ++F+   LD G++        ++    R G   E+ ++   +  K D + W V++S
Sbjct: 177 DRQGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQK-DIISWNVMIS 235

Query: 683 SCRLHANVRLAKRAAEELFRLD----PK-NSAPYSLLANIYSSLGRWDDLRAVRELMS 735
              L A +  ++ A E L  +D    P+ +   +  + +  S LG  D    ++EL+S
Sbjct: 236 ---LEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVS 290


>gi|242093006|ref|XP_002436993.1| hypothetical protein SORBIDRAFT_10g014210 [Sorghum bicolor]
 gi|241915216|gb|EER88360.1| hypothetical protein SORBIDRAFT_10g014210 [Sorghum bicolor]
          Length = 698

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 199/657 (30%), Positives = 338/657 (51%), Gaps = 74/657 (11%)

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           VP    LA++ ++        H    HG+ IK+G   + ++ N LL  Y       HA  
Sbjct: 29  VPMRDPLAALLRSGG------HPHSAHGVAIKLGCIASTFLCNNLLHAYLSRSVPAHARR 82

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS-----IDSVSLSSVLGVC 231
           +F+EMS  N V+++ ++SG A+   + EA  +F  M+  A        DS  L +++  C
Sbjct: 83  LFDEMSRRNLVSWSVVISGSARHGVLAEAFALFSHMLHGAGQGSWDRPDSFMLGALVAGC 142

Query: 232 AREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           +R                 +R+V  G QVH    K G + D  ++ +L+DMYAK G +DS
Sbjct: 143 SR-----------------ARHVDAGVQVHACVAKFGVDEDESVAAALVDMYAKCGWVDS 185

Query: 291 AEVIFSNLPERSVVSWNVMIA---GYGQKYQSTKAIELLQRMKSCGFEPDEVT------- 340
           +   F+  P+RSV+SW  MIA     G       A+ L ++M +    P  VT       
Sbjct: 186 SWRAFTLAPQRSVLSWTSMIACLVNQGSSGYHDAAMLLFKKMLALKVWPTNVTFSCILKV 245

Query: 341 -------SINMLV-ACVRSGDIKTGREMFDSMPSP-----------------------SV 369
                  S+ M +  C+    +K G E+  ++ S                         V
Sbjct: 246 FNTPDLLSVGMQIHGCL----LKIGTEVDTALGSALMTMYGRCGGVDEIARLACRIRHDV 301

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
            S  ++L +Y+++  + EAI +F+EM    +  D++ +  +L  C+++G L   ++VH  
Sbjct: 302 FSRTSLLGAYARNGYNAEAIGVFKEMILTNMAIDQSAMTCLLQVCSSVGQLRMVREVHCY 361

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
           +LKT   +D  + + +I +Y +C     AE VF+ + E DI+ W +++   + N LD E 
Sbjct: 362 ALKTFFKLDTLLLNAIITVYGRCGDTTSAETVFNLMEEQDIISWTALLTCYAQNGLDEEV 421

Query: 490 FMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
            +FF++M +  +    F   +VL +C++ S+   G Q+H++  K G  +D  V +AL+ +
Sbjct: 422 LLFFREMLRRGLGSPVFCMTSVLRACSRTSNLAIGLQIHSRTVKLGIDDDNSVENALVTL 481

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y  CG +  A + F+ M  ++ VTWN ++  ++Q+G    A++L+  M    V PDD TF
Sbjct: 482 YANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGNEVAAIQLFDLMQEEEVCPDDYTF 541

Query: 610 VAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
           V +L++CS  GLV  G E FN M+  + +EP + HYTCM+D   RAG F +A   ID MP
Sbjct: 542 VGLLSSCSRMGLVKEGCEYFNEMKAKYNLEPKMVHYTCMVDLFARAGRFCDAMDFIDAMP 601

Query: 670 CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDD 726
            + D ++WE LL+SC++H N+ L + AA+++  + P + + Y  L++I++S+  WD+
Sbjct: 602 YEPDQILWEALLASCKIHGNLGLGRIAAKKILEITPHDYSAYITLSSIHASVDMWDE 658



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 209/464 (45%), Gaps = 91/464 (19%)

Query: 1   KKAHV-AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           +  HV AG  +HA + + G+ +D  +   L+++Y+KC    S+   F   P +       
Sbjct: 144 RARHVDAGVQVHACVAKFGVDEDESVAAALVDMYAKCGWVDSSWRAFTLAPQR------- 196

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVR---NGLEEKALSVYNKMSNEGF 116
                                   +V+SW ++I+ LV    +G  + A+ ++ KM     
Sbjct: 197 ------------------------SVLSWTSMIACLVNQGSSGYHDAAMLLFKKMLALKV 232

Query: 117 VPTHITLASVFKA--STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
            PT++T + + K   +  LL V  G + HG ++KIG + +  + +AL+++Y +CG     
Sbjct: 233 WPTNVTFSCILKVFNTPDLLSV--GMQIHGCLLKIGTEVDTALGSALMTMYGRCGGVDEI 290

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             +   +   +  + T+++   A+     EA+ +F+ MI   ++ID  +++ +L VC+  
Sbjct: 291 ARLACRIRH-DVFSRTSLLGAYARNGYNAEAIGVFKEMILTNMAIDQSAMTCLLQVCSSV 349

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
           G             +  R     +VHC  +K  F+ D  L N+++ +Y + GD  SAE +
Sbjct: 350 G-----------QLRMVR-----EVHCYALKTFFKLDTLLLNAIITVYGRCGDTTSAETV 393

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS--- 351
           F+ + E+ ++SW  ++  Y Q     + +   + M   G         ++L AC R+   
Sbjct: 394 FNLMEEQDIISWTALLTCYAQNGLDEEVLLFFREMLRRGLGSPVFCMTSVLRACSRTSNL 453

Query: 352 --------------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSY 379
                                           G ++   ++F+SM +  + +WNA+L+S+
Sbjct: 454 AIGLQIHSRTVKLGIDDDNSVENALVTLYANCGSVQVALKIFNSMSNRDIVTWNALLTSF 513

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           SQ  N   AI+LF  MQ   V PD  T   +LSSC+ MG+++ G
Sbjct: 514 SQHGNEVAAIQLFDLMQEEEVCPDDYTFVGLLSSCSRMGLVKEG 557



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 188/435 (43%), Gaps = 56/435 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +L+ G   DT L + L+ +Y +C        L  ++ H               
Sbjct: 255 GMQIHGCLLKIGTEVDTALGSALMTMYGRCGGVDEIARLACRIRH--------------- 299

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                            +V S  +L+ A  RNG   +A+ V+ +M           +  +
Sbjct: 300 -----------------DVFSRTSLLGAYARNGYNAEAIGVFKEMILTNMAIDQSAMTCL 342

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +  +++  +   R  H   +K     +  + NA++++Y +CG T  A  VF  M E + 
Sbjct: 343 LQVCSSVGQLRMVREVHCYALKTFFKLDTLLLNAIITVYGRCGDTTSAETVFNLMEEQDI 402

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TA+++  A+     E L  FR M+R+ +      ++SVL  C+R             
Sbjct: 403 ISWTALLTCYAQNGLDEEVLLFFREMLRRGLGSPVFCMTSVLRACSRT------------ 450

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S    G Q+H  T+KLG + D  + N+L+ +YA  G +  A  IF+++  R +V+W
Sbjct: 451 ----SNLAIGLQIHSRTVKLGIDDDNSVENALVTLYANCGSVQVALKIFNSMSNRDIVTW 506

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N ++  + Q      AI+L   M+     PD+ T + +L +C R G +K G E F+ M +
Sbjct: 507 NALLTSFSQHGNEVAAIQLFDLMQEEEVCPDDYTFVGLLSSCSRMGLVKEGCEYFNEMKA 566

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
                P +  +  M+  ++++    +A+     M +   +PD+     +L+SC   G L 
Sbjct: 567 KYNLEPKMVHYTCMVDLFARAGRFCDAMDFIDAMPY---EPDQILWEALLASCKIHGNLG 623

Query: 422 SGKQVHAASLKTASH 436
            G+      L+   H
Sbjct: 624 LGRIAAKKILEITPH 638


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 179/532 (33%), Positives = 280/532 (52%), Gaps = 38/532 (7%)

Query: 253 NVHGQQVHCLTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
           N    Q+H   ++LG     +  S SL+  Y + G +  A  +F  + ER V +WN M++
Sbjct: 83  NASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLS 142

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD-----------IKTGRE- 359
           G  +  ++ +A+ L  RM   G   D VT  ++L  CV  GD           +K G + 
Sbjct: 143 GLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDK 202

Query: 360 -----------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                  +F  M    + +WN+++S   Q      A+K+F+ M+
Sbjct: 203 ELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMR 262

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRN 455
             GV PD  TL  + S+ A  G   S K +H   ++    +D+ +A + ++ +Y+K    
Sbjct: 263 GSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNI 322

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSS 514
           E A+R+F  +P  D V WN++I G   N L  EA   +  M+++E +   Q +F +VL +
Sbjct: 323 EAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPA 382

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
            + L +  QG ++HA   K G   D++VG+ LI++Y KCG +  A   F+ M  ++T  W
Sbjct: 383 YSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPW 442

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N +I G   +G+G EA+ L+  M   G+KPD +TFV++L ACSH+GLVD G   F+ MQ+
Sbjct: 443 NAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQV 502

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
            + + PI  HY CM D LGRAG   EA   I  MP K D  +W  LL +CR+H NV + K
Sbjct: 503 TYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGK 562

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            A++ LF LDP+N   Y L++N+Y+ +G+WD +  VR L+    + K P +S
Sbjct: 563 VASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWS 614



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 157/596 (26%), Positives = 276/596 (46%), Gaps = 109/596 (18%)

Query: 89  NNLISALVRNGLEEKALSVYNKMSN--EGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           N LI+A  R  L   A  +   + +    F P   T  S+ +A+ +        + H   
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNASAA---QLHACA 93

Query: 147 IKIGLDK-NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
           +++GL + +++ + +L+  Y + G    A  VF+EMSE +   + AM+SGL +  R  EA
Sbjct: 94  LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           + +F  M+ + V+ D+V++SSVL +C   G  V + V                +H   +K
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALV----------------MHVYAVK 197

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
            G + +L + N+L+D+Y K G ++ A+ +F  +  R +V+WN +I+G  Q+ Q+  A+++
Sbjct: 198 HGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKM 257

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGD-------------------------------- 353
            Q M+  G  PD +T +++  A  + GD                                
Sbjct: 258 FQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYA 317

Query: 354 ----IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLA 408
               I+  + MFDSMP     SWN +++ Y Q+    EA++ +  MQ   G+K  + T  
Sbjct: 318 KLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFV 377

Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
            +L + + +G L+ G ++HA S+K   ++D YV + LI +Y+KC +   A  +F ++P  
Sbjct: 378 SVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRR 437

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
               WN++I+GL ++    EA   F +M+Q  + P   +F ++L++C+           H
Sbjct: 438 STGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACS-----------H 486

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH--------GKNTVTWNEMIHG 580
           A +   G                        R FFD+M          K+     +M+  
Sbjct: 487 AGLVDQG------------------------RSFFDVMQVTYDIVPIAKHYACMADML-- 520

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG-VEIFNSMQLD 635
             + G  DEA    ++M    +KPD   + A+L AC   G V++G V   N  +LD
Sbjct: 521 -GRAGQLDEAFNFIQNM---PIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELD 572



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 200/408 (49%), Gaps = 53/408 (12%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           +++  +++ A  +   +  AYK+FDEM ER+V +WN ++S L RN    +A+ ++ +M  
Sbjct: 103 VFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVG 162

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
           EG     +T++SV      L D       H   +K GLDK ++V NAL+ +Y K G  + 
Sbjct: 163 EGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEE 222

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           A  VF  M   + VT+ +++SG  +  +   AL+MF+ M    VS D ++L S+    A+
Sbjct: 223 AQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQ 282

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA-DLHLSNSLLDMYAKNGDMDSAE 292
            G G  +                + +HC  ++ G++  D+   N+++DMYAK  ++++A+
Sbjct: 283 GGDGRSA----------------KSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQ 326

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRS 351
            +F ++P +  VSWN +I GY Q   + +A+E    M K  G +  + T +++L A    
Sbjct: 327 RMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHL 386

Query: 352 GDIKTGREM-----------------------------------FDSMPSPSVSSWNAML 376
           G ++ G  M                                   F+ MP  S   WNA++
Sbjct: 387 GALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAII 446

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           S      +  EA+ LF  MQ  G+KPD  T   +L++C+  G+++ G+
Sbjct: 447 SGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGR 494



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 188/422 (44%), Gaps = 55/422 (13%)

Query: 9   LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
           ++H + +++GL  + F+CN LI++Y K      AQ +F  M  +D+ +WN+I+S  C+  
Sbjct: 190 VMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISG-CE-- 246

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
                                       + G    AL ++  M   G  P  +TL S+  
Sbjct: 247 ----------------------------QRGQTAAALKMFQGMRGSGVSPDVLTLVSLAS 278

Query: 129 ASTALLDVEHGRRCHGLVIKIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           A     D    +  H  V++ G D  +I   NA++ +YAK    + A  +F+ M   + V
Sbjct: 279 AIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSV 338

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++  +++G  +     EA+E +  M +K   + ++  + V  + A    G          
Sbjct: 339 SWNTLITGYMQNGLANEAVERYGHM-QKHEGLKAIQGTFVSVLPAYSHLGALQ------- 390

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   G ++H L+IK+G   D+++   L+D+YAK G +  A ++F  +P RS   WN
Sbjct: 391 -------QGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWN 443

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
            +I+G G      +A+ L  RM+  G +PD VT +++L AC  +G +  GR  FD M   
Sbjct: 444 AIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVT 503

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
               P    +  M     ++    EA    + M    +KPD      +L +C   G +E 
Sbjct: 504 YDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMP---IKPDSAVWGALLGACRIHGNVEM 560

Query: 423 GK 424
           GK
Sbjct: 561 GK 562


>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 615

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 184/532 (34%), Positives = 275/532 (51%), Gaps = 40/532 (7%)

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           HG  +H   +KLGF+AD  +  +L+DMY+K   + SA  +F  +P+RSVVSWN M++ Y 
Sbjct: 64  HGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYS 123

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--------------CVRSGDIKTG--- 357
           ++    +A+ LL+ M   GFEP   T +++L                 +    IK G   
Sbjct: 124 RRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVY 183

Query: 358 ----------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                                 R++FD M   S+ SW  M+  Y +  +  EA  LF +M
Sbjct: 184 LEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQM 243

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
           Q + V  D      ++S C  +  L     VH+  LK   +  + V + LI +Y+KC   
Sbjct: 244 QHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNL 303

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
             A R+F  I E  ++ W SMIAG        EA   F++M + ++ P   + ATV+S+C
Sbjct: 304 TSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSAC 363

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           A L S   G+++   I  +G  +D  V ++LI MY KCG I  AR+ F+ +  K+   W 
Sbjct: 364 ADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWT 423

Query: 576 EMIHGYAQNGYGDEAVRLYKDMI-ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
            MI+ YA +G G+EA+ L+  M  A G+ PD I + ++  ACSHSGLV+ G++ F SMQ 
Sbjct: 424 SMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQK 483

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
           D G+ P ++H TC+ID LGR G    A   I  MP      +W  LLS+CR+H NV L +
Sbjct: 484 DFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGE 543

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            A   L    P +S  Y L+AN+Y+SLG+W +   +R  M    +VK+  +S
Sbjct: 544 LATVRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWS 595



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 242/513 (47%), Gaps = 51/513 (9%)

Query: 82  ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
            R++ +WN +I     NG   + L++Y+ M++ G    ++T   + KA   L  ++HG  
Sbjct: 8   RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67

Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
            HG V+K+G   + +V  AL+ +Y+KC     A  VF+EM + + V++ AM+S  ++   
Sbjct: 68  LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSS 127

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
           + +AL + + M        + +  S+L              ++  D+ F  ++ G+ +HC
Sbjct: 128 MDQALSLLKEMWVLGFEPTASTFVSIL------------SGYSNLDS-FEFHLLGKSIHC 174

Query: 262 LTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
             IKLG    ++ L+NSL+ MY +   MD A  +F  + E+S++SW  MI GY +   + 
Sbjct: 175 CLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAV 234

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACV------------------------------- 349
           +A  L  +M+      D V  +N++  C+                               
Sbjct: 235 EAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLI 294

Query: 350 ----RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
               + G++ + R +FD +   S+ SW +M++ Y    +  EA+ LFR M    ++P+  
Sbjct: 295 TMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGA 354

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           TLA ++S+CA +G L  G+++           D  V + LI +YSKC     A  VF R+
Sbjct: 355 TLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERV 414

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLSSSFQG 524
            + D+  W SMI   +++ +  EA   F +M   E + P    + +V  +C+      +G
Sbjct: 415 TDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEG 474

Query: 525 RQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDI 556
            +    ++KD G    +   + LI++  + G +
Sbjct: 475 LKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQL 507



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 205/457 (44%), Gaps = 87/457 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G +LH H+L+ G   DTF+   L+++YSKC++  SA+ +FD+MP + + SWNA++SA  +
Sbjct: 65  GTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSR 124

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +                               ++ALS+  +M   GF PT  T  S+
Sbjct: 125 RSSM-------------------------------DQALSLLKEMWVLGFEPTASTFVSI 153

Query: 127 FKASTALLDVEH---GRRCHGLVIKIGLDK-NIYVANALLSLYAKCGWTKHAVPVFEEMS 182
               + L   E    G+  H  +IK+G+    + +AN+L+ +Y +      A  VF+ M 
Sbjct: 154 LSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMD 213

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           E + +++T M+ G  K    VEA  +F  M  ++V ID V   +++  C +    V   +
Sbjct: 214 EKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQ----VRDLL 269

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
            A S            VH L +K G      + N L+ MYAK G++ SA  IF  + E+S
Sbjct: 270 LASS------------VHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKS 317

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG----- 357
           ++SW  MIAGY       +A++L +RM      P+  T   ++ AC   G +  G     
Sbjct: 318 MLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEE 377

Query: 358 ------------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                         RE+F+ +    ++ W +M++SY+      E
Sbjct: 378 YIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNE 437

Query: 388 AIKLFREMQF-RGVKPDRTTLAIILSSCAAMGILESG 423
           AI LF +M    G+ PD      +  +C+  G++E G
Sbjct: 438 AISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEG 474



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 169/360 (46%), Gaps = 29/360 (8%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A K+FD M E++++SW  +I   V+ G   +A  ++ +M ++      +   ++      
Sbjct: 205 ARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQ 264

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           + D+      H LV+K G ++   V N L+++YAKCG    A  +F+ + E + +++T+M
Sbjct: 265 VRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSM 324

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           ++G        EAL++FR MIR  +  +  +L++V+  CA  G               S 
Sbjct: 325 IAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLG---------------SL 369

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
           ++ GQ++       G E+D  +  SL+ MY+K G +  A  +F  + ++ +  W  MI  
Sbjct: 370 SI-GQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINS 428

Query: 313 YGQKYQSTKAIELLQRMKSC-GFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----S 366
           Y       +AI L  +M +  G  PD +   ++ +AC  SG ++ G + F SM      +
Sbjct: 429 YAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGIT 488

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD--RTTLAIILSSCAAMGILESGK 424
           P+V     ++    +      A+        +G+ PD        +LS+C   G +E G+
Sbjct: 489 PTVEHCTCLIDLLGRVGQLDLALN-----AIQGMPPDVQAQVWGPLLSACRIHGNVELGE 543



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 128/253 (50%), Gaps = 4/253 (1%)

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
           S+ +WN M+   + +    + + ++  M   GV  +  T  ++L +CA +  ++ G  +H
Sbjct: 10  SLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLH 69

Query: 428 AASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI 487
              LK     D +V + L+ +YSKC     A +VF  +P+  +V WN+M++  S  S   
Sbjct: 70  GHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMD 129

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS---SFQGRQVHAQIEKDGYVN-DIFVG 543
           +A    K+M      PT  +F ++LS  + L S      G+ +H  + K G V  ++ + 
Sbjct: 130 QALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLA 189

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           ++L+ MY +   +  AR+ FD+M  K+ ++W  MI GY + G+  EA  L+  M    V 
Sbjct: 190 NSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVG 249

Query: 604 PDDITFVAILTAC 616
            D + F+ +++ C
Sbjct: 250 IDFVVFLNLISGC 262



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 38/306 (12%)

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
           WN MI   + N    +    +  M  + ++    ++  +L +CA L S   G  +H  + 
Sbjct: 14  WNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLHGHVL 73

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVR 592
           K G+  D FV +AL++MY KC  +  ARQ FD M  ++ V+WN M+  Y++    D+A+ 
Sbjct: 74  KLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQALS 133

Query: 593 LYKDMIASGVKPDDITFVAILTACS--------------HSGLVDVG-----VEIFNSMQ 633
           L K+M   G +P   TFV+IL+  S              H  L+ +G     V + NS+ 
Sbjct: 134 LLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLM 193

Query: 634 ---------------LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD---DPV 675
                           D   E  +  +T MI    + GH  EA  L  +M  +    D V
Sbjct: 194 GMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFV 253

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPY-SLLANIYSSLGRWDDLRAVRELM 734
           ++  L+S C    ++ LA      + +       P  +LL  +Y+  G     R + +L+
Sbjct: 254 VFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLI 313

Query: 735 SENCIV 740
            E  ++
Sbjct: 314 IEKSML 319



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 110/243 (45%), Gaps = 16/243 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +++   K  +L  A ++FD + E++++SW ++I+  V  G   +AL ++ +M      
Sbjct: 291 NLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIR 350

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   TLA+V  A   L  +  G+     +   GL+ +  V  +L+ +Y+KCG    A  V
Sbjct: 351 PNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREV 410

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGC 236
           FE +++ +   +T+M++  A      EA+ +F ++   + +  D++  +SV   C+  G 
Sbjct: 411 FERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGL 470

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
             E   + +S  K                 G    +     L+D+  + G +D A     
Sbjct: 471 VEEGLKYFKSMQK---------------DFGITPTVEHCTCLIDLLGRVGQLDLALNAIQ 515

Query: 297 NLP 299
            +P
Sbjct: 516 GMP 518



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 33/177 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +  +I  NGL  D  +   LI +YSKC +   A+ +F+++  KD+            
Sbjct: 372 GQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDL------------ 419

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFVPTHITLAS 125
                                W ++I++   +G+  +A+S+++KM+  EG +P  I   S
Sbjct: 420 -------------------TVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTS 460

Query: 126 VFKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           VF A +    VE G +    + K  G+   +     L+ L  + G    A+   + M
Sbjct: 461 VFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGM 517


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 159/492 (32%), Positives = 278/492 (56%), Gaps = 39/492 (7%)

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS------------ 341
           +F  +PER++V+W +MI  + Q   +  AI+L   M+  G+ PD  T             
Sbjct: 12  VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71

Query: 342 --------------------------INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                     ++M   C   G +   R++F+ MP  +V SW A+
Sbjct: 72  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131

Query: 376 LSSYSQS-ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           +++Y+QS E  KEAI+LF +M    ++P+  + + +L +C  +    +G+QV++ ++K  
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
               N V + LI +Y++  R E A + F  + E ++V +N+++ G + N    EAF+ F 
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           ++    +  + F+FA++LS  A + +  +G Q+H ++ K GY ++  + +ALI MY +CG
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 311

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
           +I  A Q F+ M  +N ++W  MI G+A++G+   A+ ++  M+ +G KP++IT+VA+L+
Sbjct: 312 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 371

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           ACSH G++  G + FNSM  +HG+ P ++HY CM+D LGR+G   EA   I+ MP   D 
Sbjct: 372 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 431

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           ++W  LL +CR+H N  L + AAE +   +P + A Y LL+N+++S G+W D+  +R+ M
Sbjct: 432 LVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 491

Query: 735 SENCIVKDPAYS 746
            E  ++K+   S
Sbjct: 492 KERNLIKEAGCS 503



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 198/392 (50%), Gaps = 55/392 (14%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           AYK+FD+MPERN+V+W  +I+   + G    A+ ++  M   G+VP   T +SV  A T 
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC---GWTKHAVPVFEEMSEPNEVTF 189
           L  +  G++ H  VI++GL  ++ V  +L+ +YAKC   G    +  VFE+M E N +++
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 190 TAMMSGLAKTDRV-VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           TA+++  A++     EA+E+F  MI   +  +  S SSVL     + CG  SD +     
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVL-----KACGNLSDPYT---- 179

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                  G+QV+   +KLG  +   + NSL+ MYA++G M+ A   F  L E+++VS+N 
Sbjct: 180 -------GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 232

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--------------------- 347
           ++ GY +  +S +A  L   +   G      T  ++L                       
Sbjct: 233 IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG 292

Query: 348 -----CV---------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                C+         R G+I+   ++F+ M   +V SW +M++ +++      A+++F 
Sbjct: 293 YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFH 352

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           +M   G KP+  T   +LS+C+ +G++  G++
Sbjct: 353 KMLETGTKPNEITYVAVLSACSHVGMISEGQK 384



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 221/446 (49%), Gaps = 55/446 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH+ ++R GL  D  +   L+++Y+KC                         +A   
Sbjct: 75  GKQLHSRVIRLGLALDVCVGCSLVDMYAKC-------------------------AADGS 109

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNG-LEEKALSVYNKMSNEGFVPTHITLAS 125
            DD   + K+F++MPE NV+SW  +I+A  ++G  +++A+ ++ KM +    P H + +S
Sbjct: 110 VDD---SRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSS 166

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA   L D   G + +   +K+G+     V N+L+S+YA+ G  + A   F+ + E N
Sbjct: 167 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 226

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ A++ G AK  +  EA  +F  +    + I + + +S+L   A  G   +      
Sbjct: 227 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGK------ 280

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+Q+H   +K G++++  + N+L+ MY++ G++++A  +F+ + +R+V+S
Sbjct: 281 ----------GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 330

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  MI G+ +   +T+A+E+  +M   G +P+E+T + +L AC   G I  G++ F+SM 
Sbjct: 331 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 390

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P +  +  M+    +S    EA++    M    +  D      +L +C   G  
Sbjct: 391 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP---LMADALVWRTLLGACRVHGNT 447

Query: 421 ESGKQVHAASLKTASHIDNYVASGLI 446
           E G+  HAA +      D+  A  L+
Sbjct: 448 ELGR--HAAEMILEQEPDDPAAYILL 471



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 113/213 (53%), Gaps = 5/213 (2%)

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A +VF ++PE ++V W  MI   +      +A   F  M  +   P +F++++VLS+C +
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC---GDIYGARQFFDMMHGKNTVTW 574
           L     G+Q+H+++ + G   D+ VG +L++MY KC   G +  +R+ F+ M   N ++W
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 575 NEMIHGYAQNGYGD-EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
             +I  YAQ+G  D EA+ L+  MI+  ++P+  +F ++L AC +      G +++ S  
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-SYA 187

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           +  G+  +      +I    R+G   +A    D
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFD 220


>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Glycine max]
          Length = 895

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 202/718 (28%), Positives = 354/718 (49%), Gaps = 68/718 (9%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT--HITLASVF 127
           L+  +  FD +P  N  S N+ +   + + L  +AL+ +        +     +T+A   
Sbjct: 27  LKHDHHQFDFIPHPNAASVNHSMLNCLHSRLPFQALTAFKNHFQLHSLENVDEVTVALSL 86

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA     + + G + HG  +  G    + V+N+L+ +Y K G    A+ VFE +S P+ V
Sbjct: 87  KACQG--ESKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIV 144

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++  ++SG  ++   V+AL   R M    ++ D V+ +S L  C               D
Sbjct: 145 SWNTVLSGFEES---VDALNFARSMHYCGIAFDPVTYTSALAFC-------------WGD 188

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
           + F   + G Q+H L +K G   ++ + N+L+ MY++ G +D A  +F  +PER +VSWN
Sbjct: 189 HGF---LFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWN 245

Query: 308 VMIAGYGQ--KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
            MI+GY Q  K    +A+ L   M   G   D V+    + AC    +++ GR++     
Sbjct: 246 AMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQ 305

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         F+S+ + +V SW  M+S      + ++A+ 
Sbjct: 306 KVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISI-----DEEDAVS 360

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF  M+  GV P+  T   ++ +     ++  G  +H   +K+    +  V++  I +Y+
Sbjct: 361 LFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYA 420

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           K +  + + ++F  +   + V WN++I+G + N    EA + +    + E+ P Q++F +
Sbjct: 421 KFECIQESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLSAVK-EIKPNQYTFGS 479

Query: 511 VLSSCAKLS--SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           VL++ A     S   G+  H+ + K G   D  V  AL++MY K GDI  +++ F+    
Sbjct: 480 VLNAIAAAEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLE 539

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           +    W  +I  YA++G  +  + LY +M   G+ PD ITF+++L AC   G+VD G  +
Sbjct: 540 RTQFAWTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRV 599

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F+SM   H +EP  +HY+ M+D LGR G   EAE L+ ++P      + + LL SCRLH 
Sbjct: 600 FDSMVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCRLHG 659

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           N+ +A++    L  +DP +S PY L+AN+Y+  G+W+ +  VR  M    + K+  +S
Sbjct: 660 NMEMAEKVVGRLIEMDPASSGPYVLMANLYAEKGKWEKVAEVRRGMRGRGVKKEVGFS 717



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 239/515 (46%), Gaps = 76/515 (14%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK--ALSVYNKMSNEG 115
           N+++   CKS +   A  +F+ +   ++VSWN ++S     G EE   AL+    M   G
Sbjct: 116 NSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLS-----GFEESVDALNFARSMHYCG 170

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
                +T  S             G + H LV+K GL   +++ NAL+++Y++ G    A 
Sbjct: 171 IAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEAR 230

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRV--VEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
            VF+EM E + V++ AM+SG A+  +   +EA+ +F  M+R  + ID VSL+  +  C  
Sbjct: 231 RVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGH 290

Query: 234 EGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                             +N+  G+Q+H LT K+G+   + + N L+  Y+K      A+
Sbjct: 291 -----------------MKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAK 333

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----- 347
            +F ++  R+VVSW  MI+          A+ L   M+  G  P++VT I ++ A     
Sbjct: 334 AVFESISNRNVVSWTTMIS-----IDEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRN 388

Query: 348 -----------CVRS-------------------GDIKTGREMFDSMPSPSVSSWNAMLS 377
                      C++S                     I+   ++F+ +      SWNA++S
Sbjct: 389 LVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALIS 448

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG--ILESGKQVHAASLKTAS 435
            Y+Q+ ++KEA+  +     + +KP++ T   +L++ AA     L  GK  H+  LK   
Sbjct: 449 GYAQNGSYKEALLTYLS-AVKEIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGL 507

Query: 436 HIDNYVASGLIGIYSKCQRNELAE--RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM-F 492
             D  V+  L+ +Y K  R ++ E  RVF+   E     W ++I+  + +  D E+ M  
Sbjct: 508 GTDPIVSGALLDMYGK--RGDIIESQRVFNETLERTQFAWTAIISAYARHG-DFESVMSL 564

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
           + +M +  + P   +F +VL++C +      G +V
Sbjct: 565 YTEMEREGINPDSITFLSVLAACCRKGMVDAGHRV 599



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 220/499 (44%), Gaps = 91/499 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH+ +++ GL  + F+ N L+ +YS+      A+ +FD+MP +D+ SWNA++S   +
Sbjct: 194 GWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQ 253

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                           GLE  A+ ++  M   G +  H++L   
Sbjct: 254 EGKCY---------------------------GLE--AVLLFVNMVRHGMLIDHVSLTGA 284

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   + ++E GR+ HGL  K+G   ++ V N L+S Y+KC   K A  VFE +S  N 
Sbjct: 285 VSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNV 344

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T M+S + + D    A+ +F  M    V  + V+   ++          E       
Sbjct: 345 VSWTTMIS-IDEED----AVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTE------- 392

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G  +H L IK  F ++  +SNS + MYAK   +  +  IF  L  R  VSW
Sbjct: 393 ---------GLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSW 443

Query: 307 NVMIAGYGQKYQSTKAIEL-----------------------------LQRMKSC----- 332
           N +I+GY Q     +A+                               L   KSC     
Sbjct: 444 NALISGYAQNGSYKEALLTYLSAVKEIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLL 503

Query: 333 --GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
             G   D + S  +L    + GDI   + +F+     +  +W A++S+Y++  + +  + 
Sbjct: 504 KLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIISAYARHGDFESVMS 563

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS---HIDNYVASGLIG 447
           L+ EM+  G+ PD  T   +L++C   G++++G +V  + +K  S     ++Y  S ++ 
Sbjct: 564 LYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEPTSEHY--SIMVD 621

Query: 448 IYSKCQRNELAERVFHRIP 466
           +  +  R + AE + H+IP
Sbjct: 622 MLGRVGRLDEAEELMHQIP 640



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 174/374 (46%), Gaps = 28/374 (7%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N ++S   K +  + A  +F+ +  RNVVSW  +IS       EE A+S++N M   G  
Sbjct: 317 NVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISID-----EEDAVSLFNAMRVNGVY 371

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  +T   +  A T    V  G   HGL IK        V+N+ +++YAK    + +  +
Sbjct: 372 PNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKI 431

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           FEE++    V++ A++SG A+     EAL  + L   K +  +  +  SVL   A     
Sbjct: 432 FEELNCRETVSWNALISGYAQNGSYKEALLTY-LSAVKEIKPNQYTFGSVLNAIA----- 485

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                 A  D   +   HG+  H   +KLG   D  +S +LLDMY K GD+  ++ +F+ 
Sbjct: 486 ------AAEDISLN---HGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNE 536

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
             ER+  +W  +I+ Y +       + L   M+  G  PD +T +++L AC R G +  G
Sbjct: 537 TLERTQFAWTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAG 596

Query: 358 REMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
             +FDSM       P+   ++ M+    +     EA +L  ++      P  + L  +L 
Sbjct: 597 HRVFDSMVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQIP---GGPGLSVLQSLLG 653

Query: 413 SCAAMGILESGKQV 426
           SC   G +E  ++V
Sbjct: 654 SCRLHGNMEMAEKV 667


>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
          Length = 705

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/649 (28%), Positives = 325/649 (50%), Gaps = 48/649 (7%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D +  RR H  V+  G      +   L+  YAK G   HA+ VF+ M   N   + A++ 
Sbjct: 68  DFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIK 127

Query: 195 GLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           GL    R  EALEMF  M+   +V++D  +   V+  CA  G        AQ    +   
Sbjct: 128 GLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALG------AVAQGRKVW--- 178

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
              + V           ++ +  +L+DM+AK G +D A  +F ++  R + +W  MI G 
Sbjct: 179 ---EMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGT 235

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------------- 360
                  + ++L   M+S GF  D + +  ++ AC R+G+++ G  +             
Sbjct: 236 VHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDI 295

Query: 361 ----------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                                 F S  S  V SW++++  YSQ+  H  ++ LF EM   
Sbjct: 296 YVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISL 355

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G+ P+ +TLA IL   + + ++ SGK++H  S++       +V S LI +YSK     +A
Sbjct: 356 GINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVA 415

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
           E +F    + D+  WNSM+AG ++N     AF   + +++  + P   +  +VL  C + 
Sbjct: 416 ETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQH 475

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
               QG+++HA + K    +   V +AL++MYCKCG +  A++ F +M  +NTVT+N +I
Sbjct: 476 HMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILI 535

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
             + ++ + D+A+  +  M   G+ PD +TFVA+L+ CSH+GL+D G+ +++SM  D+ +
Sbjct: 536 SSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNI 595

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
            P  +HY+C++D   R G   EA   +  M  + +  +   LL++CR+H  + +A+   +
Sbjct: 596 SPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGK 655

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            +F  +P +   + LL+NIY+  G W D+  +R ++ E  + K+   SL
Sbjct: 656 RIFEQNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNSL 704



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 256/555 (46%), Gaps = 71/555 (12%)

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           ++ A  K  D+  A ++FD MP RN  +WN +I  LV  G   +AL ++  M N+G V  
Sbjct: 94  LVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAV 153

Query: 120 H-ITLASVFKASTALLDVEHGRRCHGLV---IKIGLDK-NIYVANALLSLYAKCGWTKHA 174
              T   V KA  AL  V  GR+   +V   I  G  + N++V  AL+ ++AKCG    A
Sbjct: 154 DGFTYPPVIKACAALGAVAQGRKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEA 213

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             VFE M   +   +TAM+ G   +   +E +++F  M  +   +DS+  ++V+  C R 
Sbjct: 214 RNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRA 273

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
           G   E  V             G  +H   +K G   D+++SN+L+DMY K G ++ A+ +
Sbjct: 274 G---ELQV-------------GTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCL 317

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML-----VACV 349
           F +   + VVSW+ +I GY Q      ++ L   M S G  P+  T  ++L     +  +
Sbjct: 318 FWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLI 377

Query: 350 RSGD------------------------------IKTGREMFDSMPSPSVSSWNAMLSSY 379
           RSG                               I+    +F       ++ WN+M++ Y
Sbjct: 378 RSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGY 437

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           + +     A    R +Q  G+KPD  T+  +L  C    +L  GK++HA  +K   +   
Sbjct: 438 AVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVC 497

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            V + L+ +Y KC   E+A+ VF  + E + V +N +I+    ++ + +A  FF  M+++
Sbjct: 498 SVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRD 557

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI--------EKDGYVNDIFVGSALIEMYC 551
            + P + +F  +LS C+      +G  ++  +        EK+ Y       S ++++Y 
Sbjct: 558 GIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHY-------SCIVDLYS 610

Query: 552 KCGDIYGARQFFDMM 566
           +CG +  A  F   M
Sbjct: 611 RCGKLDEAWCFMSNM 625



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 237/507 (46%), Gaps = 71/507 (14%)

Query: 48  KMPHKDIYSWNAI--LSAQC-------KSDDLEFAYKLFDEMPERNVVSWNNLISALVRN 98
           +M   DI S NA   +  QC       K   L+ A  +F+ M  R++ +W  +I   V +
Sbjct: 179 EMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHS 238

Query: 99  GLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVA 158
           G   + + ++N M +EGF    +  A+V  A     +++ G   HG  +K G   +IYV+
Sbjct: 239 GNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVS 298

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           NAL+ +Y KCG  + A  +F   +  + V++++++ G ++      ++ +F  MI   ++
Sbjct: 299 NALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGIN 358

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            +S +L+S+L                 S  K  R+  G+++HC +I+ G E    + ++L
Sbjct: 359 PNSSTLASILP--------------CLSVLKLIRS--GKEIHCFSIRHGLERSEFVVSAL 402

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +D+Y+K G +  AE IF    ++ +  WN M+AGY     S  A   L+ ++  G +PD 
Sbjct: 403 IDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDH 462

Query: 339 VTSINMLVAC-----------------------------------VRSGDIKTGREMFDS 363
           VT +++L  C                                    + G ++  +E+F  
Sbjct: 463 VTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQL 522

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M   +  ++N ++SS+ +  +  +A+  F  M+  G+ PD+ T   +LS C+  G+++ G
Sbjct: 523 MTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKG 582

Query: 424 KQVHAASL---KTASHIDNYVASGLIGIYSKCQRNELAERVFHRI---PELDIVCWNSMI 477
             ++ + L     +   ++Y  S ++ +YS+C + + A      +   PE+D++    ++
Sbjct: 583 LHLYHSMLHDYNISPEKEHY--SCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVL--GGLL 638

Query: 478 AGLSL-NSLDIEAFMFFKQMRQNEMYP 503
           A   + N +DI   +  +   QN   P
Sbjct: 639 AACRVHNRMDIAELVGKRIFEQNPNDP 665



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GK LHA++++  +     + N L+++Y KC     A+ +F  M  ++  ++N ++S+ 
Sbjct: 479 IQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSF 538

Query: 65  CKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
            K +  + A   FD M    +    V++  L+S     GL +K L +Y+ M
Sbjct: 539 GKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSM 589


>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
          Length = 700

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/649 (28%), Positives = 325/649 (50%), Gaps = 48/649 (7%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D +  RR H  V+  G      +   L+  YAK G   HA+ VF+ M   N   + A++ 
Sbjct: 63  DFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIK 122

Query: 195 GLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           GL    R  EALEMF  M+   +V++D  +   V+  CA  G        AQ    +   
Sbjct: 123 GLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALG------AVAQGRKVW--- 173

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
              + V           ++ +  +L+DM+AK G +D A  +F ++  R + +W  MI G 
Sbjct: 174 ---EMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGT 230

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------------- 360
                  + ++L   M+S GF  D + +  ++ AC R+G+++ G  +             
Sbjct: 231 VHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDI 290

Query: 361 ----------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                                 F S  S  V SW++++  YSQ+  H  ++ LF EM   
Sbjct: 291 YVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISL 350

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G+ P+ +TLA IL   + + ++ SGK++H  S++       +V S LI +YSK     +A
Sbjct: 351 GINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVA 410

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
           E +F    + D+  WNSM+AG ++N     AF   + +++  + P   +  +VL  C + 
Sbjct: 411 ETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQH 470

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
               QG+++HA + K    +   V +AL++MYCKCG +  A++ F +M  +NTVT+N +I
Sbjct: 471 HMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILI 530

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
             + ++ + D+A+  +  M   G+ PD +TFVA+L+ CSH+GL+D G+ +++SM  D+ +
Sbjct: 531 SSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNI 590

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
            P  +HY+C++D   R G   EA   +  M  + +  +   LL++CR+H  + +A+   +
Sbjct: 591 SPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGK 650

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            +F  +P +   + LL+NIY+  G W D+  +R ++ E  + K+   SL
Sbjct: 651 RIFEQNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNSL 699



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 256/555 (46%), Gaps = 71/555 (12%)

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           ++ A  K  D+  A ++FD MP RN  +WN +I  LV  G   +AL ++  M N+G V  
Sbjct: 89  LVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAV 148

Query: 120 H-ITLASVFKASTALLDVEHGRRCHGLV---IKIGLDK-NIYVANALLSLYAKCGWTKHA 174
              T   V KA  AL  V  GR+   +V   I  G  + N++V  AL+ ++AKCG    A
Sbjct: 149 DGFTYPPVIKACAALGAVAQGRKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEA 208

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             VFE M   +   +TAM+ G   +   +E +++F  M  +   +DS+  ++V+  C R 
Sbjct: 209 RNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRA 268

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
           G   E  V             G  +H   +K G   D+++SN+L+DMY K G ++ A+ +
Sbjct: 269 G---ELQV-------------GTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCL 312

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML-----VACV 349
           F +   + VVSW+ +I GY Q      ++ L   M S G  P+  T  ++L     +  +
Sbjct: 313 FWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLI 372

Query: 350 RSGD------------------------------IKTGREMFDSMPSPSVSSWNAMLSSY 379
           RSG                               I+    +F       ++ WN+M++ Y
Sbjct: 373 RSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGY 432

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
           + +     A    R +Q  G+KPD  T+  +L  C    +L  GK++HA  +K   +   
Sbjct: 433 AVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVC 492

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
            V + L+ +Y KC   E+A+ VF  + E + V +N +I+    ++ + +A  FF  M+++
Sbjct: 493 SVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRD 552

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI--------EKDGYVNDIFVGSALIEMYC 551
            + P + +F  +LS C+      +G  ++  +        EK+ Y       S ++++Y 
Sbjct: 553 GIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHY-------SCIVDLYS 605

Query: 552 KCGDIYGARQFFDMM 566
           +CG +  A  F   M
Sbjct: 606 RCGKLDEAWCFMSNM 620



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 237/507 (46%), Gaps = 71/507 (14%)

Query: 48  KMPHKDIYSWNAI--LSAQC-------KSDDLEFAYKLFDEMPERNVVSWNNLISALVRN 98
           +M   DI S NA   +  QC       K   L+ A  +F+ M  R++ +W  +I   V +
Sbjct: 174 EMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHS 233

Query: 99  GLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVA 158
           G   + + ++N M +EGF    +  A+V  A     +++ G   HG  +K G   +IYV+
Sbjct: 234 GNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVS 293

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           NAL+ +Y KCG  + A  +F   +  + V++++++ G ++      ++ +F  MI   ++
Sbjct: 294 NALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGIN 353

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            +S +L+S+L                 S  K  R+  G+++HC +I+ G E    + ++L
Sbjct: 354 PNSSTLASILP--------------CLSVLKLIRS--GKEIHCFSIRHGLERSEFVVSAL 397

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +D+Y+K G +  AE IF    ++ +  WN M+AGY     S  A   L+ ++  G +PD 
Sbjct: 398 IDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDH 457

Query: 339 VTSINMLVAC-----------------------------------VRSGDIKTGREMFDS 363
           VT +++L  C                                    + G ++  +E+F  
Sbjct: 458 VTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQL 517

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M   +  ++N ++SS+ +  +  +A+  F  M+  G+ PD+ T   +LS C+  G+++ G
Sbjct: 518 MTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKG 577

Query: 424 KQVHAASL---KTASHIDNYVASGLIGIYSKCQRNELAERVFHRI---PELDIVCWNSMI 477
             ++ + L     +   ++Y  S ++ +YS+C + + A      +   PE+D++    ++
Sbjct: 578 LHLYHSMLHDYNISPEKEHY--SCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVL--GGLL 633

Query: 478 AGLSL-NSLDIEAFMFFKQMRQNEMYP 503
           A   + N +DI   +  +   QN   P
Sbjct: 634 AACRVHNRMDIAELVGKRIFEQNPNDP 660



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + GK LHA++++  +     + N L+++Y KC     A+ +F  M  ++  ++N ++S+ 
Sbjct: 474 IQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSF 533

Query: 65  CKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKM 111
            K +  + A   FD M    +    V++  L+S     GL +K L +Y+ M
Sbjct: 534 GKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSM 584


>gi|414865182|tpg|DAA43739.1| TPA: hypothetical protein ZEAMMB73_281838 [Zea mays]
          Length = 1925

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 202/762 (26%), Positives = 369/762 (48%), Gaps = 124/762 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LHA  L+ G+ +D  L + LI +Y+                                
Sbjct: 259 GDSLHAFALKGGVINDESLTSALITMYAAF------------------------------ 288

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            DDL  +  +FD  P +++VS+N++ISA +++ + ++A  ++  M      P  +T+ SV
Sbjct: 289 -DDLSSSRMVFDLHPVKDLVSFNSMISAYMQHHIWKEAFEIFRLMHCVAVRPNLVTVVSV 347

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             + +    + HG   HG++IK+GL +++ VA+AL+S+Y+K G    ++ +F     P+ 
Sbjct: 348 LPSCSDFFGINHGESVHGMIIKLGLAEHVSVASALVSMYSKLGKLDSSLLLFCCCVAPDA 407

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            T   ++SG                                                   
Sbjct: 408 TTIMNVISGC-------------------------------------------------- 417

Query: 247 DNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
             ++++++H  + +H   ++  FE+   + N+LL MYA   D+ ++  +F  +  R ++S
Sbjct: 418 --RYTKDLHMAKSIHAYAVRNKFESYHSVMNALLAMYADCRDISTSHTLFQKMEVRMLIS 475

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD------------ 353
           WN MI+G+ +   S   + L  +M     + D VT I ++ +    GD            
Sbjct: 476 WNTMISGFAEIGDSDTCLILFCQMFHEEVQFDLVTLIGLISSFSVPGDAIVGESVHSLAI 535

Query: 354 -----------------------IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                  ++ G+++FDS  S +  ++NA++S Y ++    + + 
Sbjct: 536 KSGCNSDVSLTNALITMYANCGIVEAGQQLFDSCCSRNTITYNALMSGYRKNNISAKILP 595

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF +M     KP+  TL  +L  C +      GK +H+ +++  + ++  + +  +G+YS
Sbjct: 596 LFYQMVENDEKPNLVTLLNLLPVCQSQ---LQGKCIHSYAVRNFTRLETPLFTSAMGMYS 652

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMI-AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +    E   ++F  I   +++ WN+ + A +     D+     FK M    + P   +  
Sbjct: 653 RFNNIEYCSKIFSLIGARNLIVWNAFLSACVQCKQADM-VVDCFKHMLFLNVRPDAVTML 711

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
            ++S+C++L +++    + A I + G+  +I V +ALI+ + +CG I  AR+ FD    K
Sbjct: 712 ALISACSQLGNAYFAACIMAVILQKGFSTNILVLNALIDTHSRCGSISLARELFDSSVEK 771

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           ++VTW  MI+ Y+ +G G+ A+ L+  MI SGV PDDITFV+IL+AC+H+GLV+ G  +F
Sbjct: 772 DSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACAHNGLVEQGRTLF 831

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
            S+Q D+G+ P ++HY CM+D LGR GH  EA  ++  MP +    + E LL +CR H N
Sbjct: 832 KSLQADYGITPRMEHYACMVDLLGRTGHLDEAYDVVRSMPFRPSDNLLESLLGACRFHGN 891

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
            ++ +   + L + +   S  Y +L+NIY+S G+W D   +R
Sbjct: 892 YKIGESIGKLLIKSEYGKSRSYVMLSNIYASAGKWSDCEQLR 933



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 159/613 (25%), Positives = 281/613 (45%), Gaps = 59/613 (9%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKM--PHKDIYSWNAILSAQCKS 67
           LHAH+   G   DTF+   L+E Y       SA  LF +       +YS N  L+ +C S
Sbjct: 60  LHAHLAVAGAIQDTFVVTGLVERYVYFGKAASAALLFAETYRSRPAVYSLN--LAVRCFS 117

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D                             +G   + L +Y ++    F   + T   V 
Sbjct: 118 D-----------------------------HGFHRELLHLYRELC--CFGSDNFTFPPVI 146

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           +A TA+  +  GR  H  V++ G   N+ V  ALL LYAK G    +  VF+ M   + +
Sbjct: 147 RACTAVSCLRLGREMHCRVLRTGHGGNVGVQTALLDLYAKAGQIDVSRRVFDCMVLRDLI 206

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++ AM+SG +  +   EA+EM + M +  +  ++ +   ++G+C   G            
Sbjct: 207 SWNAMVSGYSLNECFREAVEMLQEMQQGGMRPNASTFVGIVGMCGSVG------------ 254

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
               R+V G  +H   +K G   D  L+++L+ MYA   D+ S+ ++F   P + +VS+N
Sbjct: 255 ---DRDV-GDSLHAFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSFN 310

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
            MI+ Y Q +   +A E+ + M      P+ VT +++L +C     I  G  +   +   
Sbjct: 311 SMISAYMQHHIWKEAFEIFRLMHCVAVRPNLVTVVSVLPSCSDFFGINHGESVHGMIIKL 370

Query: 366 --SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
             +  VS  +A++S YS+      ++ LF       V PD TT+  ++S C     L   
Sbjct: 371 GLAEHVSVASALVSMYSKLGKLDSSLLLF----CCCVAPDATTIMNVISGCRYTKDLHMA 426

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           K +HA +++      + V + L+ +Y+ C+    +  +F ++    ++ WN+MI+G +  
Sbjct: 427 KSIHAYAVRNKFESYHSVMNALLAMYADCRDISTSHTLFQKMEVRMLISWNTMISGFAEI 486

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
                  + F QM   E+     +   ++SS +    +  G  VH+   K G  +D+ + 
Sbjct: 487 GDSDTCLILFCQMFHEEVQFDLVTLIGLISSFSVPGDAIVGESVHSLAIKSGCNSDVSLT 546

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           +ALI MY  CG +   +Q FD    +NT+T+N ++ GY +N    + + L+  M+ +  K
Sbjct: 547 NALITMYANCGIVEAGQQLFDSCCSRNTITYNALMSGYRKNNISAKILPLFYQMVENDEK 606

Query: 604 PDDITFVAILTAC 616
           P+ +T + +L  C
Sbjct: 607 PNLVTLLNLLPVC 619



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 164/667 (24%), Positives = 304/667 (45%), Gaps = 37/667 (5%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            A+L    K+  ++ + ++FD M  R+++SWN ++S    N    +A+ +  +M   G  
Sbjct: 178 TALLDLYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSLNECFREAVEMLQEMQQGGMR 237

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T   +     ++ D + G   H   +K G+  +  + +AL+++YA       +  V
Sbjct: 238 PNASTFVGIVGMCGSVGDRDVGDSLHAFALKGGVINDESLTSALITMYAAFDDLSSSRMV 297

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+     + V+F +M+S   +     EA E+FRLM   AV  + V++ SVL  C      
Sbjct: 298 FDLHPVKDLVSFNSMISAYMQHHIWKEAFEIFRLMHCVAVRPNLVTVVSVLPSC------ 351

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
             SD F  +        HG+ VH + IKLG    + ++++L+ MY+K G +DS+ ++F  
Sbjct: 352 --SDFFGIN--------HGESVHGMIIKLGLAEHVSVASALVSMYSKLGKLDSSLLLFCC 401

Query: 298 LPERSVVSWNVMIAG--YGQKYQSTKAIELLQ-RMKSCGFEPDEVTSINMLVACVRSGDI 354
                  +   +I+G  Y +     K+I     R K   FE        +L       DI
Sbjct: 402 CVAPDATTIMNVISGCRYTKDLHMAKSIHAYAVRNK---FESYHSVMNALLAMYADCRDI 458

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
            T   +F  M    + SWN M+S +++  +    + LF +M    V+ D  TL  ++SS 
Sbjct: 459 STSHTLFQKMEVRMLISWNTMISGFAEIGDSDTCLILFCQMFHEEVQFDLVTLIGLISSF 518

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           +  G    G+ VH+ ++K+  + D  + + LI +Y+ C   E  +++F      + + +N
Sbjct: 519 SVPGDAIVGESVHSLAIKSGCNSDVSLTNALITMYANCGIVEAGQQLFDSCCSRNTITYN 578

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           ++++G   N++  +    F QM +N+  P   +   +L  C    S  QG+ +H+   ++
Sbjct: 579 ALMSGYRKNNISAKILPLFYQMVENDEKPNLVTLLNLLPVC---QSQLQGKCIHSYAVRN 635

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
               +  + ++ + MY +  +I    + F ++  +N + WN  +    Q    D  V  +
Sbjct: 636 FTRLETPLFTSAMGMYSRFNNIEYCSKIFSLIGARNLIVWNAFLSACVQCKQADMVVDCF 695

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           K M+   V+PD +T +A+++ACS  G       I  ++ L  G    +     +ID   R
Sbjct: 696 KHMLFLNVRPDAVTMLALISACSQLGNAYFAACIM-AVILQKGFSTNILVLNALIDTHSR 754

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL------DPKNS 708
            G    A  L D    + D V W  ++++  +H N      AA +LF +      DP + 
Sbjct: 755 CGSISLARELFDS-SVEKDSVTWGAMINAYSMHGN----GEAALDLFSMMIDSGVDPDDI 809

Query: 709 APYSLLA 715
              S+L+
Sbjct: 810 TFVSILS 816



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 163/328 (49%), Gaps = 4/328 (1%)

Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           P+V S N  +  +S    H+E + L+RE+   G   D  T   ++ +C A+  L  G+++
Sbjct: 104 PAVYSLNLAVRCFSDHGFHRELLHLYRELCCFG--SDNFTFPPVIRACTAVSCLRLGREM 161

Query: 427 HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
           H   L+T    +  V + L+ +Y+K  + +++ RVF  +   D++ WN+M++G SLN   
Sbjct: 162 HCRVLRTGHGGNVGVQTALLDLYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSLNECF 221

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
            EA    ++M+Q  M P   +F  ++  C  +     G  +HA   K G +ND  + SAL
Sbjct: 222 REAVEMLQEMQQGGMRPNASTFVGIVGMCGSVGDRDVGDSLHAFALKGGVINDESLTSAL 281

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           I MY    D+  +R  FD+   K+ V++N MI  Y Q+    EA  +++ M    V+P+ 
Sbjct: 282 ITMYAAFDDLSSSRMVFDLHPVKDLVSFNSMISAYMQHHIWKEAFEIFRLMHCVAVRPNL 341

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           +T V++L +CS    ++ G E  + M +  G+   +   + ++    + G    + +L  
Sbjct: 342 VTVVSVLPSCSDFFGINHG-ESVHGMIIKLGLAEHVSVASALVSMYSKLGKLDSSLLLFC 400

Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAK 694
                D   I  V +S CR   ++ +AK
Sbjct: 401 CCVAPDATTIMNV-ISGCRYTKDLHMAK 427



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 122/302 (40%), Gaps = 50/302 (16%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           ++ + GK +H++ +RN    +T L    + +YS+ NN      +F  +  +++  WNA L
Sbjct: 620 QSQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCSKIFSLIGARNLIVWNAFL 679

Query: 62  SA--QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           SA  QCK  D+      F  M   NV                                P 
Sbjct: 680 SACVQCKQADM--VVDCFKHMLFLNV-------------------------------RPD 706

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
            +T+ ++  A + L +         ++++ G   NI V NAL+  +++CG    A  +F+
Sbjct: 707 AVTMLALISACSQLGNAYFAACIMAVILQKGFSTNILVLNALIDTHSRCGSISLARELFD 766

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
              E + VT+ AM++  +       AL++F +MI   V  D ++  S+L  CA  G   +
Sbjct: 767 SSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACAHNGLVEQ 826

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                +S               L    G    +     ++D+  + G +D A  +  ++P
Sbjct: 827 GRTLFKS---------------LQADYGITPRMEHYACMVDLLGRTGHLDEAYDVVRSMP 871

Query: 300 ER 301
            R
Sbjct: 872 FR 873



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 11/206 (5%)

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW--NEMIHGYA 582
           R++HA +   G + D FV + L+E Y   G    A   F   +      +  N  +  ++
Sbjct: 58  RELHAHLAVAGAIQDTFVVTGLVERYVYFGKAASAALLFAETYRSRPAVYSLNLAVRCFS 117

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF-NSMQLDHGVEPI 641
            +G+  E + LY+++   G   D+ TF  ++ AC+    + +G E+    ++  HG    
Sbjct: 118 DHGFHRELLHLYRELCCFG--SDNFTFPPVIRACTAVSCLRLGREMHCRVLRTGHGGN-- 173

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           +   T ++D   +AG    +  + D M  + D + W  ++S   L+   R A    +E+ 
Sbjct: 174 VGVQTALLDLYAKAGQIDVSRRVFDCMVLR-DLISWNAMVSGYSLNECFREAVEMLQEMQ 232

Query: 702 R--LDPKNSAPYSLLANIYSSLGRWD 725
           +  + P N++ +  +  +  S+G  D
Sbjct: 233 QGGMRP-NASTFVGIVGMCGSVGDRD 257


>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Vitis vinifera]
          Length = 700

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 183/571 (32%), Positives = 302/571 (52%), Gaps = 37/571 (6%)

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           +P   ++  ++SG  +   + +AL+MF  M+      + ++++S+L  C     G+++  
Sbjct: 7   QPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACT----GLKALR 62

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+ +H + +K G   ++++  S++DMY+K G  D AE +F     ++
Sbjct: 63  L------------GKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKN 110

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
              WN MIA Y  + +   A+ LL+ M+  G++PD +T   +L    R+G      E+  
Sbjct: 111 TAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLS 170

Query: 363 SMPS----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG------------VKPDRTT 406
            M      P+V S+N ++S + QS    EA+K+FR MQ               ++P+  T
Sbjct: 171 EMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPIT 230

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
           +   L +CA + +   GK++H  +L+     + +V+S L+ +Y+KC   + A +VF RI 
Sbjct: 231 ITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRID 290

Query: 467 ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQ 526
             + V WN+++AG   N    EA   F +M    + P+  +F  +  +C  +++   GR 
Sbjct: 291 GRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRG 350

Query: 527 VH---AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           +H   A+ + D   N I   SALI+MY KCG I  A+  FD    K+   WN MI  ++ 
Sbjct: 351 LHGYAAKCQLDELKNAI--ASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSV 408

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
           +G    A  ++  M   G+ PD ITFV++L+AC+  GLV+ G + FNSM++ +GV   L+
Sbjct: 409 HGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLE 468

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
           HYTCM+  LG AG   EA   I +MP   D  +W  LL +CR+H+N  + +RAA+ LF L
Sbjct: 469 HYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFEL 528

Query: 704 DPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           +P N+  Y LL+NIY S G WD  + +R  M
Sbjct: 529 EPDNATNYMLLSNIYVSSGMWDFAKNLRSFM 559



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 223/490 (45%), Gaps = 99/490 (20%)

Query: 80  MPER----NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLD 135
           MPER     V SWN +IS  V+NG  E AL ++++M      P  IT+AS+  A T L  
Sbjct: 1   MPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKA 60

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSG 195
           +  G+  H + +K G+  N+YV  +++ +Y+KCG   +A  VF +    N   +  M++ 
Sbjct: 61  LRLGKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAA 120

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
                +V +AL + R M +     D ++ +++L   AR G   ++               
Sbjct: 121 YVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQA--------------- 165

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
                       FE    L + ++ M  K                 +VVS+NV+I+G+ Q
Sbjct: 166 ------------FE----LLSEMVQMGLK----------------PNVVSFNVLISGFQQ 193

Query: 316 KYQSTKAIELLQRMKSC--GFEPDEVTSINM----------LVAC--------------- 348
              S +A+++ + M+S   G  P+EV +++M          L AC               
Sbjct: 194 SGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGY 253

Query: 349 -VRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
            +R+G                   D+ +  ++F  +   +  SWNA+++ Y  ++  +EA
Sbjct: 254 TLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQPEEA 313

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA-SHIDNYVASGLIG 447
           +KLF EM   G++P   T  I+  +C  +  +  G+ +H  + K     + N +AS LI 
Sbjct: 314 LKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIASALID 373

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+KC     A+ VF    E D+  WN+MI+  S++ +   AF  F QM    + P   +
Sbjct: 374 MYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELLGILPDHIT 433

Query: 508 FATVLSSCAK 517
           F ++LS+CA+
Sbjct: 434 FVSLLSACAR 443



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 219/484 (45%), Gaps = 74/484 (15%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK--------- 52
           KA   GK +HA  L++G+  + ++   +I++YSKC +   A+ +F K  +K         
Sbjct: 59  KALRLGKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMI 118

Query: 53  --------------------------DIYSWNAILSAQCKSDDLEFAYKLFDEMPE---- 82
                                     D+ ++N ILS   ++     A++L  EM +    
Sbjct: 119 AAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLK 178

Query: 83  RNVVSWNNLISALVRNGLEEKALSVY------------NKMSNEGFVPTHITLASVFKAS 130
            NVVS+N LIS   ++GL  +AL V+            N++ N    P  IT+     A 
Sbjct: 179 PNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPAC 238

Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
             L     G+  HG  ++ G + NI+V++AL+ +YAKC     A  VF  +   N V++ 
Sbjct: 239 ADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWN 298

Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
           A+M+G     +  EAL++F  M+ + +   S++   +   C         D+ A    +F
Sbjct: 299 ALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACG--------DIAAI---RF 347

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
            R +HG    C   +L       ++++L+DMYAK G +  A+ +F +  E+ V  WN MI
Sbjct: 348 GRGLHGYAAKCQLDEL----KNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMI 403

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP----- 365
           + +     +  A  +  +M+  G  PD +T +++L AC R G ++ G + F+SM      
Sbjct: 404 SAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGV 463

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           + ++  +  M+     +    EA+   R+M +    PD    A +L +C      E G++
Sbjct: 464 AATLEHYTCMVGILGGAGLLDEALDFIRQMPY---PPDACMWATLLQACRVHSNPEIGER 520

Query: 426 VHAA 429
              A
Sbjct: 521 AAKA 524


>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
          Length = 800

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 205/642 (31%), Positives = 321/642 (50%), Gaps = 76/642 (11%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           H L IK G   +IY AN ++S YAKCG  + A  +F+E S+ + V++  M++G       
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNF 81

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
             ALE  + M R   ++D  S  S+L   A  G  VE                GQQVH +
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGY-VEV---------------GQQVHSM 125

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            +K+G+E ++   ++LLDMYAK   ++ A  +F ++  R+ V+WN +I+GY        A
Sbjct: 126 IVKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTA 185

Query: 323 IELLQRMKSCGFEPDE------------------VTSIN-----------------MLVA 347
             LL  M+  G E D+                   T ++                 ++ A
Sbjct: 186 FWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITA 245

Query: 348 CVRSGDIKTGREMFD-SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
               G I+    +FD ++ +  + +WN+ML++Y  +   +EA +LF EMQ  G +PD  T
Sbjct: 246 YSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYT 305

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE--RVFHR 464
              ++S+         GK +H   +K        +++ LI +Y K     + E   +F  
Sbjct: 306 YTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFES 365

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           +   D V WNS++ G S + L  +A  FF+ MR   +    ++F+ VL SC+ L++   G
Sbjct: 366 LENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLG 425

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           +QVH                        CG I  AR+ FD     +++ WN +I GYAQ+
Sbjct: 426 QQVHVL----------------------CGVIEDARKSFDATPKDSSIAWNSLIFGYAQH 463

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G G  A+ L+  M    VK D ITFVA+LTACSH GLV+ G     SM+ D+G+ P ++H
Sbjct: 464 GRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEH 523

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y CMID LGRAG   EA+ LI+ MP + D ++W+ LL +CR   ++ LA + A  L  L+
Sbjct: 524 YACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELE 583

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           P+    Y LL++++  L RW++  +++ LM E  + K P +S
Sbjct: 584 PEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWS 625



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 231/519 (44%), Gaps = 76/519 (14%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           IY+ N I+S   K  ++  A K+FDE  +R+ VSWN +I+  V  G  E AL     M  
Sbjct: 34  IYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNFETALEFLKSMKR 93

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
            GF     +  S+ K    +  VE G++ H +++KIG + N++  +ALL +YAKC   + 
Sbjct: 94  YGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVED 153

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           A  VF+ ++  N VT+ A++SG A       A  +   M  + V ID  + +        
Sbjct: 154 AFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDDGTFAP------- 206

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
               + + +     +K +      QVH   +K G  +D  + N+++  Y++ G ++ AE 
Sbjct: 207 ----LLTLLDDPDLHKLT-----TQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAER 257

Query: 294 IFSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
           +F    E R +V+WN M+A Y    Q  +A EL   M+  GFEPD  T  +++ A     
Sbjct: 258 VFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXA 317

Query: 353 D-----------IKTGRE--------------------------MFDSMPSPSVSSWNAM 375
                       IK G E                          +F+S+ +    SWN++
Sbjct: 318 HQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSI 377

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           L+ +SQS   ++A+K F  M+ + V  D    + +L SC+ +  L+ G+QVH        
Sbjct: 378 LTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVH-------- 429

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
                V  G+I         E A + F   P+   + WNS+I G + +     A   F  
Sbjct: 430 -----VLCGVI---------EDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFL 475

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           M+   +     +F  VL++C+ +    +G      +E D
Sbjct: 476 MKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESD 514



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 220/486 (45%), Gaps = 62/486 (12%)

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S + F+        HCL IK G  A ++ +N+++  YAK G++  A  +F    +R  VS
Sbjct: 8   SQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVS 67

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML--VACV-------------- 349
           WN MIAG         A+E L+ MK  GF  D  +  ++L  VACV              
Sbjct: 68  WNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIV 127

Query: 350 ---RSGDIKTGR----------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                G++  G                 E+F S+   +  +WNA++S Y+   +   A  
Sbjct: 128 KIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFW 187

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           L   M+  GV+ D  T A +L+      + +   QVHA  +K     D  V + +I  YS
Sbjct: 188 LLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYS 247

Query: 451 KCQRNELAERVFH-RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +C   E AERVF   I   D+V WNSM+A   +N+ + EAF  F +M+     P  +++ 
Sbjct: 248 ECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYT 307

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK--CGDIYGARQFFDMMH 567
           +V+S+  + +   QG+ +H  + K G    + + ++LI MY K     +  A   F+ + 
Sbjct: 308 SVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLE 367

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            K+ V+WN ++ G++Q+G  ++A++ +++M +  V  D   F A+L +CS    + +G +
Sbjct: 368 NKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQ 427

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           +               H  C        G   +A    D  P KD  + W  L+     H
Sbjct: 428 V---------------HVLC--------GVIEDARKSFDATP-KDSSIAWNSLIFGYAQH 463

Query: 688 ANVRLA 693
              ++A
Sbjct: 464 GRGKIA 469



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 214/492 (43%), Gaps = 69/492 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+ I++ G   + F  + L+++Y+KC     A  +F  +  ++  +WNA++S    
Sbjct: 119 GQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAH 178

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D   A+ L D                                M  EG      T A +
Sbjct: 179 VGDRGTAFWLLD-------------------------------CMELEGVEIDDGTFAPL 207

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                     +   + H  ++K GL  +  V NA+++ Y++CG  + A  VF+   E  +
Sbjct: 208 LTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRD 267

Query: 187 -VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+ +M++     ++  EA E+F  M       D  + +SV+           S  F  
Sbjct: 268 LVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVI-----------SAAF-- 314

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK--NGDMDSAEVIFSNLPERSV 303
              + +    G+ +H L IK G E  + +SNSL+ MY K  +  MD A  IF +L  +  
Sbjct: 315 ---EXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDH 371

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------VR 350
           VSWN ++ G+ Q   S  A++  + M+S     D      +L +C             V 
Sbjct: 372 VSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVL 431

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
            G I+  R+ FD+ P  S  +WN+++  Y+Q    K A+ LF  M+ R VK D  T   +
Sbjct: 432 CGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAV 491

Query: 411 LSSCAAMGILESG---KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP- 466
           L++C+ +G++E G    +   +       +++Y    +I +  +  R + A+ +   +P 
Sbjct: 492 LTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYAC--MIDLLGRAGRLDEAKALIEAMPF 549

Query: 467 ELDIVCWNSMIA 478
           E D + W +++ 
Sbjct: 550 EPDAMVWKTLLG 561


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 159/492 (32%), Positives = 278/492 (56%), Gaps = 39/492 (7%)

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS------------ 341
           +F  +PER++V+W +MI  + Q   +  AI+L   M+  G+ PD  T             
Sbjct: 7   VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66

Query: 342 --------------------------INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
                                     ++M   C   G +   R++F+ MP  +V SW A+
Sbjct: 67  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126

Query: 376 LSSYSQS-ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           +++Y+QS E  KEAI+LF +M    ++P+  + + +L +C  +    +G+QV++ ++K  
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
               N V + LI +Y++  R E A + F  + E ++V +N+++ G + N    EAF+ F 
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
           ++    +  + F+FA++LS  A + +  +G Q+H ++ K GY ++  + +ALI MY +CG
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 306

Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
           +I  A Q F+ M  +N ++W  MI G+A++G+   A+ ++  M+ +G KP++IT+VA+L+
Sbjct: 307 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 366

Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
           ACSH G++  G + FNSM  +HG+ P ++HY CM+D LGR+G   EA   I+ MP   D 
Sbjct: 367 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 426

Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           ++W  LL +CR+H N  L + AAE +   +P + A Y LL+N+++S G+W D+  +R+ M
Sbjct: 427 LVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 486

Query: 735 SENCIVKDPAYS 746
            E  ++K+   S
Sbjct: 487 KERNLIKEAGCS 498



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 198/392 (50%), Gaps = 55/392 (14%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           AYK+FD+MPERN+V+W  +I+   + G    A+ ++  M   G+VP   T +SV  A T 
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC---GWTKHAVPVFEEMSEPNEVTF 189
           L  +  G++ H  VI++GL  ++ V  +L+ +YAKC   G    +  VFE+M E N +++
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 190 TAMMSGLAKTDRV-VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           TA+++  A++     EA+E+F  MI   +  +  S SSVL     + CG  SD +     
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVL-----KACGNLSDPYT---- 174

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                  G+QV+   +KLG  +   + NSL+ MYA++G M+ A   F  L E+++VS+N 
Sbjct: 175 -------GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 227

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--------------------- 347
           ++ GY +  +S +A  L   +   G      T  ++L                       
Sbjct: 228 IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG 287

Query: 348 -----CV---------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                C+         R G+I+   ++F+ M   +V SW +M++ +++      A+++F 
Sbjct: 288 YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFH 347

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           +M   G KP+  T   +LS+C+ +G++  G++
Sbjct: 348 KMLETGTKPNEITYVAVLSACSHVGMISEGQK 379



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 221/446 (49%), Gaps = 55/446 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH+ ++R GL  D  +   L+++Y+KC                         +A   
Sbjct: 70  GKQLHSRVIRLGLALDVCVGCSLVDMYAKC-------------------------AADGS 104

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNG-LEEKALSVYNKMSNEGFVPTHITLAS 125
            DD   + K+F++MPE NV+SW  +I+A  ++G  +++A+ ++ KM +    P H + +S
Sbjct: 105 VDD---SRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSS 161

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA   L D   G + +   +K+G+     V N+L+S+YA+ G  + A   F+ + E N
Sbjct: 162 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 221

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ A++ G AK  +  EA  +F  +    + I + + +S+L   A  G   +      
Sbjct: 222 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGK------ 275

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+Q+H   +K G++++  + N+L+ MY++ G++++A  +F+ + +R+V+S
Sbjct: 276 ----------GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 325

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  MI G+ +   +T+A+E+  +M   G +P+E+T + +L AC   G I  G++ F+SM 
Sbjct: 326 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 385

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P +  +  M+    +S    EA++    M    +  D      +L +C   G  
Sbjct: 386 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP---LMADALVWRTLLGACRVHGNT 442

Query: 421 ESGKQVHAASLKTASHIDNYVASGLI 446
           E G+  HAA +      D+  A  L+
Sbjct: 443 ELGR--HAAEMILEQEPDDPAAYILL 466



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 113/213 (53%), Gaps = 5/213 (2%)

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A +VF ++PE ++V W  MI   +      +A   F  M  +   P +F++++VLS+C +
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC---GDIYGARQFFDMMHGKNTVTW 574
           L     G+Q+H+++ + G   D+ VG +L++MY KC   G +  +R+ F+ M   N ++W
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 575 NEMIHGYAQNGYGD-EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
             +I  YAQ+G  D EA+ L+  MI+  ++P+  +F ++L AC +      G +++ S  
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-SYA 182

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
           +  G+  +      +I    R+G   +A    D
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFD 215


>gi|302810635|ref|XP_002987008.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
 gi|300145173|gb|EFJ11851.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
          Length = 694

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 201/696 (28%), Positives = 354/696 (50%), Gaps = 74/696 (10%)

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
           +NV SW  +ISA VR      AL ++  M+ EG     +TL ++  A ++L D++ G+  
Sbjct: 5   KNVFSWTIIISAYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQGKMI 64

Query: 143 HGLVIKIGL------DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
           H L++++G       ++++ V N+L+++YAKC     A+ +F+ M   +  ++T M++  
Sbjct: 65  HSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTAF 124

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           A+  ++  A++ +R M    V  ++V+  ++L  C+  G                    G
Sbjct: 125 AQNGQLQRAIQCYRQMCCDGVDPNAVTFVALLAACSSGG----------------ELAAG 168

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +++       G ++DL + +++++ Y K G +D A   F  +P ++ V+WN MIA Y Q 
Sbjct: 169 RKIAARVEASGLDSDLIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYVQS 228

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------------------- 348
             +T+A++L   M+  G  PD +   ++L AC                            
Sbjct: 229 GAATQAMDLFATMEDEGVVPDAMAVSSILGACSGLESGKRIHSAVIDRRQELQSDRAVCN 288

Query: 349 ------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE---AIKLFREMQFRG 399
                  R G +   R +F ++PS +  SW  ++++++Q EN  +   A +LFREM   G
Sbjct: 289 ALVHMYARCGSLDDARLVFLAIPSKNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDG 348

Query: 400 VKPDRTTLAIILSSCAAM--GILESGKQVHAASLKTASHIDNY----VASGLIGIYSKCQ 453
           V P   T+   L +C+ M  G L SG+ +H A + TA  ++      V + L+ +Y+ C 
Sbjct: 349 VAPSEVTIFYALETCSKMDRGGLASGRALHTA-MDTAGRVELLSSVEVLNSLLDMYASCG 407

Query: 454 RNELAERVF--HRIPE-LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
               AE +F  H + + +D+V W +MIA    +     A +  K+M    +   + + +T
Sbjct: 408 SLIDAEAIFFDHLLGKNVDVVSWTNMIAAYVQHGQSSSALLLAKKMDLEGVKSDEIAMST 467

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM---H 567
           +L +C    ++  GR++H +  + GY ++  VG+AL+ MY   G +  A + F  +   +
Sbjct: 468 ILGACTAHQATSLGRELHRRARELGYASNTIVGNALVFMYGSWGRVDDAARVFQELKNAN 527

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
             N+ T+  MI GYA+ G   +A+ LY +M   GV+P D TF +I  ACSH+G +   +E
Sbjct: 528 SPNSNTFTAMIAGYARQGRTLQALSLYNEMNLHGVEPRDATFTSIFQACSHAGFLAKALE 587

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
            F  +    G+EP  +H+ C++D LGR+G   EAE L+  MP + D V W  LL+SC   
Sbjct: 588 HFVFIYDFQGLEPTAEHFGCVVDLLGRSGFVREAEELVLAMPYEPDIVAWRSLLASCG-G 646

Query: 688 ANVRLAKRAAEELFRLDPKN-SAPYSLLANIYSSLG 722
           ++   ++RAAEE   L P   S+ Y LL+N+  ++G
Sbjct: 647 SDQGASRRAAEEAVHLQPSGCSSHYVLLSNLVKTVG 682



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 262/548 (47%), Gaps = 76/548 (13%)

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S  N  ++T ++S   + D   +AL++FR M ++    D V+L+++LG C          
Sbjct: 3   SRKNVFSWTIIISAYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGAC---------- 52

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGF------EADLHLSNSLLDMYAKNGDMDSAEVIF 295
                 +       G+ +H L ++LG+      E DL + NSL++MYAK   +  A  IF
Sbjct: 53  ------SSLEDLQQGKMIHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIF 106

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
             +  RSV SW +M+  + Q  Q  +AI+  ++M   G +P+ VT + +L AC   G++ 
Sbjct: 107 DRMKNRSVFSWTIMVTAFAQNGQLQRAIQCYRQMCCDGVDPNAVTFVALLAACSSGGELA 166

Query: 356 TG-----------------------------------REMFDSMPSPSVSSWNAMLSSYS 380
            G                                   RE FD MP+ +  +WN M+++Y 
Sbjct: 167 AGRKIAARVEASGLDSDLIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYV 226

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI--D 438
           QS    +A+ LF  M+  GV PD   ++ IL +C+    LESGK++H+A +     +  D
Sbjct: 227 QSGAATQAMDLFATMEDEGVVPDAMAVSSILGACSG---LESGKRIHSAVIDRRQELQSD 283

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL--NSLDIE-AFMFFKQ 495
             V + L+ +Y++C   + A  VF  IP  + V W ++IA  +   N  DIE AF  F++
Sbjct: 284 RAVCNALVHMYARCGSLDDARLVFLAIPSKNTVSWTTIIAAFAQQENRDDIEAAFQLFRE 343

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSS--FQGRQVHAQIEKDGYV---NDIFVGSALIEMY 550
           M  + + P++ +    L +C+K+       GR +H  ++  G V   + + V ++L++MY
Sbjct: 344 MDLDGVAPSEVTIFYALETCSKMDRGGLASGRALHTAMDTAGRVELLSSVEVLNSLLDMY 403

Query: 551 CKCGDIYGARQ-FFDMMHGKN--TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
             CG +  A   FFD + GKN   V+W  MI  Y Q+G    A+ L K M   GVK D+I
Sbjct: 404 ASCGSLIDAEAIFFDHLLGKNVDVVSWTNMIAAYVQHGQSSSALLLAKKMDLEGVKSDEI 463

Query: 608 TFVAILTACSHSGLVDVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
               IL AC+      +G E+   + +L +    I+ +   ++   G  G   +A  +  
Sbjct: 464 AMSTILGACTAHQATSLGRELHRRARELGYASNTIVGN--ALVFMYGSWGRVDDAARVFQ 521

Query: 667 EMPCKDDP 674
           E+   + P
Sbjct: 522 ELKNANSP 529



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/516 (24%), Positives = 235/516 (45%), Gaps = 70/516 (13%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D+   N++++   K   L  A  +FD M  R+V SW  +++A  +NG  ++A+  Y +M
Sbjct: 81  QDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTAFAQNGQLQRAIQCYRQM 140

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
             +G  P  +T  ++  A ++  ++  GR+    V   GLD ++ V +A+++ Y KCG  
Sbjct: 141 CCDGVDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLDSDLIVGSAIVNFYGKCGRL 200

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A   F+ M   N VT+  M++   ++    +A+++F  M  + V  D++++SS+LG C
Sbjct: 201 DEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATMEDEGVVPDAMAVSSILGAC 260

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI--KLGFEADLHLSNSLLDMYAKNGDMD 289
           +    G+ES               G+++H   I  +   ++D  + N+L+ MYA+ G +D
Sbjct: 261 S----GLES---------------GKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSLD 301

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQS---TKAIELLQRMKSCGFEPDEVTSINMLV 346
            A ++F  +P ++ VSW  +IA + Q+        A +L + M   G  P EVT    L 
Sbjct: 302 DARLVFLAIPSKNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDGVAPSEVTIFYALE 361

Query: 347 ACVR--SGDIKTGREMFDSMPSPS------------------------------------ 368
            C +   G + +GR +  +M +                                      
Sbjct: 362 TCSKMDRGGLASGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIFFDHLL 421

Query: 369 -----VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
                V SW  M+++Y Q      A+ L ++M   GVK D   ++ IL +C A      G
Sbjct: 422 GKNVDVVSWTNMIAAYVQHGQSSSALLLAKKMDLEGVKSDEIAMSTILGACTAHQATSLG 481

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV---CWNSMIAGL 480
           +++H  + +     +  V + L+ +Y    R + A RVF  +   +      + +MIAG 
Sbjct: 482 RELHRRARELGYASNTIVGNALVFMYGSWGRVDDAARVFQELKNANSPNSNTFTAMIAGY 541

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
           +     ++A   + +M  + + P   +F ++  +C+
Sbjct: 542 ARQGRTLQALSLYNEMNLHGVEPRDATFTSIFQACS 577



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 139/535 (25%), Positives = 223/535 (41%), Gaps = 121/535 (22%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ + A +  +GL  D  + + ++  Y KC     A+  FD+MP K+  +WN +++A  
Sbjct: 167 AGRKIAARVEASGLDSDLIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAA-- 224

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                         V++G   +A+ ++  M +EG VP  + ++S
Sbjct: 225 -----------------------------YVQSGAATQAMDLFATMEDEGVVPDAMAVSS 255

Query: 126 VFKASTALLDVEHGRRCHGLVI--KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           +  A + L   E G+R H  VI  +  L  +  V NAL+ +YA+CG    A  VF  +  
Sbjct: 256 ILGACSGL---ESGKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSLDDARLVFLAIPS 312

Query: 184 PNEVTFTAMMSGLAKT---DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            N V++T +++  A+    D +  A ++FR M      +D V+ S V    A E C    
Sbjct: 313 KNTVSWTTIIAAFAQQENRDDIEAAFQLFREM-----DLDGVAPSEVTIFYALETC---- 363

Query: 241 DVFAQSDNKFSRN--VHGQQVHCLTIKLG---FEADLHLSNSLLDMYAKNGDMDSAEVI- 294
                  +K  R     G+ +H      G     + + + NSLLDMYA  G +  AE I 
Sbjct: 364 -------SKMDRGGLASGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIF 416

Query: 295 FSNLPERS--VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
           F +L  ++  VVSW  MIA Y Q  QS+ A+ L ++M   G + DE+    +L AC    
Sbjct: 417 FDHLLGKNVDVVSWTNMIAAYVQHGQSSSALLLAKKMDLEGVKSDEIAMSTILGACTAHQ 476

Query: 353 DIKTGREM--------------------------------------FDSMPSPSVSSWNA 374
               GRE+                                        +  SP+ +++ A
Sbjct: 477 ATSLGRELHRRARELGYASNTIVGNALVFMYGSWGRVDDAARVFQELKNANSPNSNTFTA 536

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL--- 431
           M++ Y++     +A+ L+ EM   GV+P   T   I  +C+  G L    + H   +   
Sbjct: 537 MIAGYARQGRTLQALSLYNEMNLHGVEPRDATFTSIFQACSHAGFLAKALE-HFVFIYDF 595

Query: 432 ----KTASH----IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
                TA H    +D    SG +         E  E V     E DIV W S++A
Sbjct: 596 QGLEPTAEHFGCVVDLLGRSGFV--------REAEELVLAMPYEPDIVAWRSLLA 642



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 100/435 (22%), Positives = 186/435 (42%), Gaps = 77/435 (17%)

Query: 6   AGKLLHAHIL--RNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           +GK +H+ ++  R  L  D  +CN L+ +Y++C +   A+ +F  +P K+  SW  I++A
Sbjct: 265 SGKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSLDDARLVFLAIPSKNTVSWTTIIAA 324

Query: 64  ---QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
              Q   DD+E A++LF EM                                 +G  P+ 
Sbjct: 325 FAQQENRDDIEAAFQLFREMDL-------------------------------DGVAPSE 353

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLD--------KNIYVANALLSLYAKCGWTK 172
           +T   +F A      ++ G    G  +   +D         ++ V N+LL +YA CG   
Sbjct: 354 VT---IFYALETCSKMDRGGLASGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLI 410

Query: 173 HAVPVFEEM---SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
            A  +F +       + V++T M++   +  +   AL + + M  + V  D +++S++LG
Sbjct: 411 DAEAIFFDHLLGKNVDVVSWTNMIAAYVQHGQSSSALLLAKKMDLEGVKSDEIAMSTILG 470

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            C                        G+++H    +LG+ ++  + N+L+ MY   G +D
Sbjct: 471 AC----------------TAHQATSLGRELHRRARELGYASNTIVGNALVFMYGSWGRVD 514

Query: 290 SAEVIFSNLPERSVVSWNV---MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
            A  +F  L   +  + N    MIAGY ++ ++ +A+ L   M   G EP + T  ++  
Sbjct: 515 DAARVFQELKNANSPNSNTFTAMIAGYARQGRTLQALSLYNEMNLHGVEPRDATFTSIFQ 574

Query: 347 ACVRSGDIKTGREMFDSM-----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           AC  +G +    E F  +       P+   +  ++    +S   +EA +L   M +   +
Sbjct: 575 ACSHAGFLAKALEHFVFIYDFQGLEPTAEHFGCVVDLLGRSGFVREAEELVLAMPY---E 631

Query: 402 PDRTTLAIILSSCAA 416
           PD      +L+SC  
Sbjct: 632 PDIVAWRSLLASCGG 646



 Score = 46.2 bits (108), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 46/209 (22%)

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS----------- 617
           KN  +W  +I  Y +  +G +A++L++ M   G + D++T   +L ACS           
Sbjct: 5   KNVFSWTIIISAYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQGKMI 64

Query: 618 HSGLVDVG-----------------VEIFNSMQLDHGVEPILDH--------YTCMIDCL 652
           HS +V++G                 V ++   +       I D         +T M+   
Sbjct: 65  HSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTAF 124

Query: 653 GRAGHFHEAEMLIDEMPCKD-DP--VIWEVLLSSC----RLHANVRLAKRAAEELFRLDP 705
            + G    A     +M C   DP  V +  LL++C     L A  ++A R   E   LD 
Sbjct: 125 AQNGQLQRAIQCYRQMCCDGVDPNAVTFVALLAACSSGGELAAGRKIAARV--EASGLD- 181

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELM 734
            +    S + N Y   GR D+ R   + M
Sbjct: 182 SDLIVGSAIVNFYGKCGRLDEAREAFDRM 210


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 172/520 (33%), Positives = 285/520 (54%), Gaps = 35/520 (6%)

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
           +I  GF +DL + ++++  Y K   + +A  +F  + ER  V WN M++G  +     +A
Sbjct: 132 SIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEA 191

Query: 323 IELLQRMKSCGFEPDEVT--------------SINMLVACV------------------- 349
           I +   M   G   D  T              ++ M + C+                   
Sbjct: 192 ILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACL 251

Query: 350 --RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
             + G+I+T R +F  +  P + S+NAM+S Y+ +   + +++LF+E+   G K + +++
Sbjct: 252 YSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSI 311

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
             ++      G L   + +H    K+    ++ V++ L  +YS+    E A  +F    E
Sbjct: 312 VGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSE 371

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
             +  WN+MI+G + N L  +A   F++M++ E+ P   +  ++LS+CA+L +   G+ V
Sbjct: 372 KSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWV 431

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H  I ++ + ++IFV +ALI+MY KCG I  A++ F MM  KN VTWN MI GY  +GYG
Sbjct: 432 HDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYG 491

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
            EA+ L+ +M+ S V P  +TF+++L ACSH+GLV  G EIF SM  DHG EP+ +HY C
Sbjct: 492 HEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYAC 551

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
           M+D LGRAG+  +A   I +MP +  P +W  LL +C +H +  LA+ A+++LF LDP+N
Sbjct: 552 MVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQN 611

Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
              Y LL+NIYS+   + +  +VR ++    + K P  +L
Sbjct: 612 VGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTL 651



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 142/561 (25%), Positives = 254/561 (45%), Gaps = 88/561 (15%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           HA I+ NGL +D     +L    S       A  LF  +P+ D++ +N            
Sbjct: 30  HAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNV----------- 78

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKA 129
                               LI A   N     A+S+Y  +  +    P + T A V   
Sbjct: 79  --------------------LIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISG 118

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
           +++L             I  G   +++V +A+++ Y K      A  VF+ M E + V +
Sbjct: 119 ASSLGLGLLLHAHS---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLW 175

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVESDVFAQSDN 248
             M+SGL K     EA+ +F  M++  +  DS ++++VL GV   +   +          
Sbjct: 176 NTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLAL---------- 225

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                  G  + CL +K+GF +  ++   L  +Y+K G++++A ++F  + +  +VS+N 
Sbjct: 226 -------GMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNA 278

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM-----------LVACV-------- 349
           MI+GY    ++  ++ L + +   G + +  + + +           L  C+        
Sbjct: 279 MISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSG 338

Query: 350 ----------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                           R  +I++ R +FD     S++SWNAM+S Y+Q+   ++AI LF+
Sbjct: 339 VVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQ 398

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
           EMQ   V+P+  T+  ILS+CA +G L  GK VH    + +   + +V++ LI +Y+KC 
Sbjct: 399 EMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCG 458

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
               A+R+F  +PE + V WN+MI+G  L+    EA   F +M  + + PT  +F +VL 
Sbjct: 459 SITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLY 518

Query: 514 SCAKLSSSFQGRQVHAQIEKD 534
           +C+      +G ++   +  D
Sbjct: 519 ACSHAGLVREGDEIFRSMVHD 539



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 162/373 (43%), Gaps = 54/373 (14%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
            A+ +   + +++E A  LFDE  E+++ SWN +IS   +NGL EKA+S++ +M      
Sbjct: 347 TALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVR 406

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  +T+ S+  A   L  +  G+  H L+ +   + NI+V+ AL+ +YAKCG    A  +
Sbjct: 407 PNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRL 466

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  M E N VT+ AM+SG        EAL +F  M+   VS   V+  SVL  C+  G  
Sbjct: 467 FSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAG-- 524

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
               +  + D  F   VH           GFE        ++D+  + G++D        
Sbjct: 525 ----LVREGDEIFRSMVHDH---------GFEPLPEHYACMVDLLGRAGNLD-------- 563

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
                                  KA++ +++M     EP       +L AC+   D    
Sbjct: 564 -----------------------KALDFIRKMP---VEPGPPVWGALLGACMIHKDANLA 597

Query: 358 REMFDSM--PSPSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           R   D +    P    +  +LS+ YS  +N+ EA  +   ++ R  K  +T    ++   
Sbjct: 598 RLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRR--KLAKTPGCTLIEVA 655

Query: 415 AAMGILESGKQVH 427
             + I  SG Q H
Sbjct: 656 NTLHIFTSGDQSH 668



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 28/277 (10%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M +RG+   R     +++  + +  L    Q HA  +    H D    + L    S  + 
Sbjct: 1   MLYRGIASTRNLFLTLINRVSTLHQL---NQTHAQIILNGLHNDLVTVTKLTHKLSHLKA 57

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN-EMYPTQFSFATVLS 513
            + A  +F  IP  D+  +N +I   SLN+    A   +  +R++  + P  F++A V+S
Sbjct: 58  IDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVIS 117

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
             + L                G+ +D+FVGSA++  Y K   +  AR+ FD M  ++TV 
Sbjct: 118 GASSLGLGLLLHAHSIV---AGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVL 174

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN M+ G  +N   DEA+ ++ DM+  G+  D  T  A+L           GV     + 
Sbjct: 175 WNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLP----------GVAELQDLA 224

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
           L  G++           CL     FH    +I  + C
Sbjct: 225 LGMGIQ-----------CLAMKVGFHSHAYVITGLAC 250



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 5/117 (4%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  I R     + F+   LI++Y+KC +   AQ LF  MP K+  +WNA++S    
Sbjct: 428 GKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGL 487

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE-GFVP 118
                 A  LF+EM    V    V++ +++ A    GL  +   ++  M ++ GF P
Sbjct: 488 HGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEP 544


>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 674

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 184/630 (29%), Positives = 317/630 (50%), Gaps = 53/630 (8%)

Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
           ++ + L   YA CG   +A  +F+EM + + +++  ++    +     +A+ +F  M+ +
Sbjct: 50  HILSTLSVTYALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSE 109

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            +             C  +G        A++  +      G  +H   ++  F  D ++ 
Sbjct: 110 GIK------------CVPDG--YTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQ 155

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+LL MY   G ++ A  +F  +  R V+SWN MI+GY +      A+ +   M + G +
Sbjct: 156 NALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVD 215

Query: 336 PDEVTSINMLVAC-----------------------------------VRSGDIKTGREM 360
           PD  T ++ML  C                                   ++ G +   R +
Sbjct: 216 PDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
           F  M    V +W  M++ Y +  + + A++L R MQF GV+P+  T+A ++S+C     L
Sbjct: 276 FGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKL 335

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
             GK +H  +++     D  + + LI +Y+KC+  +L  RVF          W+++IAG 
Sbjct: 336 NDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGC 395

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
             N L  +A   FK+MR+ ++ P   +  ++L + A L+   Q   +H  + K G+++ +
Sbjct: 396 VQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSL 455

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMH----GKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
              + L+ +Y KCG +  A + F+ +      K+ V W  +I GY  +G G  A++++ +
Sbjct: 456 DAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFME 515

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M+ SGV P++ITF + L ACSHSGLV+ G+ +F+ M   +      +HYTC++D LGRAG
Sbjct: 516 MVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAG 575

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              EA  LI  +P +    IW  LL++C  H NV+L + AA +LF L+P+N+  Y LLAN
Sbjct: 576 RLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLAN 635

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           IY++LGRW D+  VR +M    + K P +S
Sbjct: 636 IYAALGRWKDMEKVRNMMENVGLRKKPGHS 665



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 235/490 (47%), Gaps = 61/490 (12%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF--VPTHITLASVF 127
           + +A KLFDEMP+ +++S+N +I   VR+GL   A++V+ +M +EG   VP   T   V 
Sbjct: 65  IAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVA 124

Query: 128 KASTALLDVEHGRRCHGLVIK--IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           KA+  L  +  G   HG +++   G+DK  YV NALL++Y   G  + A  VF+ M   +
Sbjct: 125 KAAGELKSISLGLVIHGRILRSWFGMDK--YVQNALLAMYMNFGRVEMARNVFDVMKNRD 182

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++  M+SG  +   + +AL MF  M+ + V  D  ++ S+L VC     G+E      
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLK-GLEM----- 236

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+ VH L  +      + + N+L++MY K G MD A  +F  +  R V++
Sbjct: 237 ----------GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVIT 286

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------- 358
           W  MI GY +      A+EL + M+  G  P+ VT  +++ AC  +  +  G+       
Sbjct: 287 WTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAI 346

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                        +F          W+A+++   Q+E  ++A+ 
Sbjct: 347 RQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALD 406

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF+ M+   V+P+  TL  +L + A +  L     +H    KT        A+GL+ +YS
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYS 466

Query: 451 KCQRNELAERVFHRIPE----LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
           KC   E A ++F+ I E     D+V W ++I+G  ++     A   F +M ++ + P + 
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEI 526

Query: 507 SFATVLSSCA 516
           +F + L++C+
Sbjct: 527 TFTSALNACS 536



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 212/469 (45%), Gaps = 61/469 (13%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D Y  NA+L+       +E A  +FD M  R+V+SWN +IS   RNG    AL +++ M 
Sbjct: 151 DKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           NEG  P H T+ S+      L  +E GR  H LV +  L   I V NAL+++Y KCG   
Sbjct: 211 NEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF  M   + +T+T M++G  +   V  ALE+ RLM  + V  ++V+++S++  C 
Sbjct: 271 EARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACG 330

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                   D    +D        G+ +H   I+    +D+ +  SL+ MYAK   +D   
Sbjct: 331 --------DALKLND--------GKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCF 374

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--- 349
            +FS         W+ +IAG  Q      A++L +RM+    EP+  T  ++L A     
Sbjct: 375 RVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLA 434

Query: 350 --------------------------------RSGDIKTGREMFDSM----PSPSVSSWN 373
                                           + G +++  ++F+ +     S  V  W 
Sbjct: 435 DLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL-- 431
           A++S Y    +   A+++F EM   GV P+  T    L++C+  G++E G  + +  L  
Sbjct: 495 ALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEH 554

Query: 432 -KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
            KT +  ++Y    ++ +  +  R + A  +   IP E     W +++A
Sbjct: 555 YKTLARSNHYTC--IVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLA 601



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 183/417 (43%), Gaps = 59/417 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +    L D   + N L+ +Y KC     A+ +F +M  +D+ +W         
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTC------- 289

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I+  + +G  E AL +   M  EG  P  +T+AS+
Sbjct: 290 ------------------------MINGYIEDGDVENALELCRLMQFEGVRPNAVTIASL 325

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A    L +  G+  HG  I+  +  +I +  +L+S+YAKC        VF   S  + 
Sbjct: 326 VSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHT 385

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
             ++A+++G  + + V +AL++F+ M R+ V  +  +L+S+L   A             +
Sbjct: 386 GPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYA-----------TLA 434

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE----RS 302
           D + + N     +HC   K GF + L  +  L+ +Y+K G ++SA  IF+ + E    + 
Sbjct: 435 DLRQTMN-----IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           VV W  +I+GYG       A+++   M   G  P+E+T  + L AC  SG ++ G  +F 
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFS 549

Query: 363 SMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
            M          + +  ++    ++    EA  L   + F   +P  T    +L++C
Sbjct: 550 FMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPF---EPTSTIWGALLAAC 603



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 120/291 (41%), Gaps = 47/291 (16%)

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           F +  +N +   Q+   ++L+  A   S  + + +H  +   G V+   + S L   Y  
Sbjct: 5   FLRRAKNALSVKQYQ--SLLNHYAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYAL 61

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK--PDDITFV 610
           CG I  AR+ FD M   + +++N +I  Y ++G   +A+ ++  M++ G+K  PD  T+ 
Sbjct: 62  CGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYP 121

Query: 611 AILTACSHSGLVDVGVEI-------------------------FNSMQLDHGVEPILDH- 644
            +  A      + +G+ I                         F  +++   V  ++ + 
Sbjct: 122 FVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNR 181

Query: 645 ----YTCMIDCLGRAGHFHEAEMLIDEM---PCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
               +  MI    R G+ ++A M+ D M       D      +L  C     + + +   
Sbjct: 182 DVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVH 241

Query: 698 E--ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV------RELMSENCIV 740
           +  E  RL  K     +L+ N+Y   GR D+ R V      R++++  C++
Sbjct: 242 KLVEEKRLGDKIEVKNALV-NMYLKCGRMDEARFVFGRMERRDVITWTCMI 291


>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 681

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 205/707 (28%), Positives = 337/707 (47%), Gaps = 117/707 (16%)

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWT-KHAVPVFE 179
           +LA + ++      +  G++ H L +K GL +  + +AN LL +YA+CG T   A  +F+
Sbjct: 7   SLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNLFD 66

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK-----AVSIDSVSLSSVLGVCA-- 232
           EM E N  ++  M+ G  +      +L++F LM +K      V I   + +  L V    
Sbjct: 67  EMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELDVAKKL 126

Query: 233 ------REGCGVESDVFAQSDNKFSRNV-------------------------------- 254
                 R G    S +   + N F+R                                  
Sbjct: 127 FNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGDTFVLASVIGACADL 186

Query: 255 ----HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
               +G+QVH   +    E D  L +SL+++YAK G +D+A  +   + E    S + +I
Sbjct: 187 GAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDFSLSALI 246

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVS 370
            GY                 +CG   D V                    +F +  +P   
Sbjct: 247 MGYA----------------NCGRMSDAV-------------------RIFRTKSNPCFV 271

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
            WN+++S Y  +    +A  L  EM+   V+ D +T+ +ILS+C++ G  +  KQ+H   
Sbjct: 272 VWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYV 331

Query: 431 LKTASHIDNYVASGLIGIYSKCQ-------------------------------RNELAE 459
            K        VAS  I  YSKC+                               R   A+
Sbjct: 332 CKVGLIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDTVLLNSMITAYCNCGRIRDAK 391

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            +F  +P   ++ WNS+I GL+ N+  +EA   F +M + ++   +FS A+V+S+CA +S
Sbjct: 392 NIFETMPSKSLISWNSIIVGLAQNAYPLEALDVFGKMNKLDLRMDRFSLASVISACACIS 451

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S   G QV A+    G  +D  V ++L++ YCKCG I   R+ FD M   + V+WN M+ 
Sbjct: 452 SLELGEQVFARAIITGLESDQAVSTSLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLM 511

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GYA NGYG E + L+ +M  +G++P DITF  +L+AC H GLV+ G + FN M+ D+ ++
Sbjct: 512 GYATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEEGRKWFNIMKYDYHID 571

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P ++HY+CM+D   RAG   EA  L++ MP + D  +W  +L  C  H +  L K+ A++
Sbjct: 572 PGIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMWSSVLRGCVAHGDKDLGKKVAQQ 631

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + +L+P++S+ Y  L+ I+++ G W+    VR++M+E  + K P +S
Sbjct: 632 IIQLNPESSSAYVQLSGIFATSGDWESSALVRKIMTEKQVKKHPGFS 678



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 150/593 (25%), Positives = 260/593 (43%), Gaps = 121/593 (20%)

Query: 7   GKLLHAHILRNGLFDDTF-LCNRLIELYSKCNNTHSAQH--------------------- 44
           GK LH   L+ GL + T  L NRL+++Y++C  T +  H                     
Sbjct: 24  GKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNLFDEMPERNCFSWNTMIEGY 83

Query: 45  -----------LFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLIS 93
                      LFD MP K+ YSWN ++S   K+ +L+ A KLF+EMP RN V+WN++I 
Sbjct: 84  MRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELDVAKKLFNEMPRRNGVAWNSMIH 143

Query: 94  ALVRNGLEEKALSVYNKMSN---EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG 150
              RNG   +A+ ++ ++++   E        LASV  A   L  +E+G++ H  ++   
Sbjct: 144 GYARNGFAREAVGLFKELNSNPLEKSCGDTFVLASVIGACADLGAIEYGKQVHARILMDD 203

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
           ++ +  + ++L++LYAKCG    A  V + M E ++ + +A++ G A   R+ +A+ +FR
Sbjct: 204 VELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDFSLSALIMGYANCGRMSDAVRIFR 263

Query: 211 L-------------------------------MIRKAVSIDSVSLSSVLGVCAREG---- 235
                                           M    V +DS +++ +L  C+  G    
Sbjct: 264 TKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSACSSTGNAQY 323

Query: 236 --------CGV---ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK 284
                   C V   +S + A +              C         D  L NS++  Y  
Sbjct: 324 AKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDTVLLNSMITAYCN 383

Query: 285 NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMK-------------- 330
            G +  A+ IF  +P +S++SWN +I G  Q     +A+++  +M               
Sbjct: 384 CGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAYPLEALDVFGKMNKLDLRMDRFSLASV 443

Query: 331 --SC-------------------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSV 369
             +C                   G E D+  S +++    + G I+ GR++FDSM     
Sbjct: 444 ISACACISSLELGEQVFARAIITGLESDQAVSTSLVDFYCKCGFIENGRKLFDSMIKTDE 503

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
            SWN+ML  Y+ +    E + LF EM+  G++P   T   +LS+C   G++E G++    
Sbjct: 504 VSWNSMLMGYATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEEGRKWFNI 563

Query: 430 SLKTASHIDNYVA--SGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
            +K   HID  +   S ++ ++++    + A  +   +P E D   W+S++ G
Sbjct: 564 -MKYDYHIDPGIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMWSSVLRG 615



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 213/456 (46%), Gaps = 55/456 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA IL + +  D+ L + LI LY+KC +  +A ++   M   D +S +A++     
Sbjct: 192 GKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDFSLSALIMGYAN 251

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +  A ++F        V WN+LIS  V N  E KA ++ N+M N        T+  +
Sbjct: 252 CGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVI 311

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK------------------- 167
             A ++  + ++ ++ HG V K+GL  ++ VA+A +  Y+K                   
Sbjct: 312 LSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDT 371

Query: 168 ------------CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
                       CG  + A  +FE M   + +++ +++ GLA+    +EAL++F  M + 
Sbjct: 372 VLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAYPLEALDVFGKMNKL 431

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            + +D  SL+SV+  CA   C              S    G+QV    I  G E+D  +S
Sbjct: 432 DLRMDRFSLASVISACA---C-------------ISSLELGEQVFARAIITGLESDQAVS 475

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
            SL+D Y K G +++   +F ++ +   VSWN M+ GY       + + L   MK  G  
Sbjct: 476 TSLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAGLR 535

Query: 336 PDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIK 390
           P ++T   +L AC   G ++ GR+ F+ M       P +  ++ M+  ++++   KEA+ 
Sbjct: 536 PTDITFTGVLSACDHCGLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALN 595

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
           L   M F   + D +  + +L  C A G  + GK+V
Sbjct: 596 LVEHMPF---EADCSMWSSVLRGCVAHGDKDLGKKV 628


>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera]
 gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 176/528 (33%), Positives = 279/528 (52%), Gaps = 42/528 (7%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           QQ+H   I       +H  N LL  +    D ++A ++FS +P  +  ++N+MI G    
Sbjct: 48  QQIHTQMII----NAIHKPNFLLHRFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTT 103

Query: 317 YQSTK-AIELLQRMKSCGFEPDEVTSINMLVACV-------------------------- 349
           +Q     IE   +MK  G  P+  T   + +AC                           
Sbjct: 104 WQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHV 163

Query: 350 ---------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                    R G++   R +FD +    + SWN+M+S YS+     +A+ LF EM+  G 
Sbjct: 164 RHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGF 223

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           +PD  TL  IL +C  +G L  G  +    ++    ++++V S LIG+Y KC     A R
Sbjct: 224 EPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARR 283

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           VF R+ + D+V WN+MI G + N +  EA + F  MR++ + P + +   VLS+CA + +
Sbjct: 284 VFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGA 343

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G+ +     + G  NDI+V +ALI+MY KCG +  A + F+ M  KN V+WN MI  
Sbjct: 344 LDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISA 403

Query: 581 YAQNGYGDEAVRLYKDMIASG--VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            A +G   E++ L+K M   G  V+P+DI+F+ +L+AC H+GLVD G ++F+ M    G+
Sbjct: 404 LAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGL 463

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
            P ++H++CM+D L RAGH HEA   I++MP K D V+   LL +C+   NV +++R   
Sbjct: 464 VPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMH 523

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            L  ++P NS  Y + + I++++ RWDD   +R LM +  + K P  S
Sbjct: 524 MLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCS 571



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 216/454 (47%), Gaps = 55/454 (12%)

Query: 155 IYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT-DRVVEALEMFRLMI 213
           I+  N LL  +       +A  +F ++  PNE  F  M+ GL  T  +    +E +  M 
Sbjct: 59  IHKPNFLLHRFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMK 118

Query: 214 RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
              +  ++ +   V   CA               N    N HGQ  H   +K G  AD H
Sbjct: 119 DFGIRPNNFTYPFVFIACA---------------NLLVLN-HGQCAHSGVLKSGLCADGH 162

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           + +SL+ MY++ G++  A  +F  + E+ +VSWN MI+GY +   +  A+ L   M+  G
Sbjct: 163 VRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAG 222

Query: 334 FEPDEVTSINMLVAC-----------------------------------VRSGDIKTGR 358
           FEPDE+T +++L AC                                    + GD+ + R
Sbjct: 223 FEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSAR 282

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            +FD M    V +WNAM++ Y+Q+    EAI LF  M+  GV PD+ TL  +LS+CA++G
Sbjct: 283 RVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIG 342

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            L+ GK +   + +     D YV++ LI +Y+KC   + A RVF  +P+ + V WN+MI+
Sbjct: 343 ALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMIS 402

Query: 479 GLSLNSLDIEAFMFFKQMRQ--NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-G 535
            L+ +    E+   FK+M +    + P   SF  VLS+C       +GRQ+   +    G
Sbjct: 403 ALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFG 462

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
            V  I   S ++++  + G ++ A  F + M  K
Sbjct: 463 LVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEK 496



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 206/418 (49%), Gaps = 63/418 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  H+ +L++GL  D  + + LI +YS+C                              
Sbjct: 145 GQCAHSGVLKSGLCADGHVRHSLITMYSRCG----------------------------- 175

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             +L  A ++FDE+ E+++VSWN++IS   R G    A+ ++ +M + GF P  +TL S+
Sbjct: 176 --ELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSI 233

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L D+  G    G V++  +D N +V +AL+ +Y KCG    A  VF+ M + + 
Sbjct: 234 LGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDV 293

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC---GVESDVF 243
           VT+ AM++G A+     EA+ +F  M    V+ D ++L  VL  CA  G    G   D +
Sbjct: 294 VTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTY 353

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
           A                    + G + D+++S +L+DMYAK G +D A  +F ++P+++ 
Sbjct: 354 AS-------------------ERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNE 394

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCG--FEPDEVTSINMLVACVRSGDIKTGREMF 361
           VSWN MI+      +  +++ L +RM   G    P++++ I +L ACV +G +  GR++F
Sbjct: 395 VSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLF 454

Query: 362 DSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           D M S     P +   + M+   +++ +  EA     +M     KPD   L  +L +C
Sbjct: 455 DLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMP---EKPDEVVLGALLGAC 509



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 232/517 (44%), Gaps = 89/517 (17%)

Query: 25  LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERN 84
           L ++L+ L  +C +T S Q +  +M    I+  N +L       D   A  LF ++P  N
Sbjct: 30  LTDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFIDLKDFNNASLLFSQIPYPN 89

Query: 85  VVSWNNLISALVRNGLE-EKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
             ++N +I  L     +    +  Y +M + G  P + T   VF A   LL + HG+  H
Sbjct: 90  EYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAH 149

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
             V+K GL  + +V ++L+++Y++CG    A  VF+E+SE + V++ +M+SG ++     
Sbjct: 150 SGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAG 209

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-CGVESDVFAQSDNKFSRNVHGQQVHCL 262
           +A+ +F  M       D ++L S+LG C   G  G+                 G  +   
Sbjct: 210 DAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGL-----------------GSWIEGF 252

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            ++   + +  + ++L+ MY K GD+ SA  +F  + ++ VV+WN MI GY Q   S +A
Sbjct: 253 VVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEA 312

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------------------------ 358
           I L   M+  G  PD++T + +L AC   G +  G+                        
Sbjct: 313 IILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDM 372

Query: 359 -----------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG--VKPDRT 405
                       +F+ MP  +  SWNAM+S+ +     +E++ LF+ M   G  V+P+  
Sbjct: 373 YAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDI 432

Query: 406 TLAIILSSCAAMGILESGKQV----------------HAAS---LKTASHI--------- 437
           +   +LS+C   G+++ G+Q+                H+     L  A H+         
Sbjct: 433 SFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEK 492

Query: 438 -----DNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
                D  V   L+G   K +  +++ERV H + E++
Sbjct: 493 MPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEME 529



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 143/292 (48%), Gaps = 20/292 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           +A++    K  DL  A ++FD M +++VV+WN +I+   +NG+ ++A+ +++ M   G  
Sbjct: 266 SALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVN 325

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  ITL  V  A  ++  ++ G+       + GL  +IYV+ AL+ +YAKCG    A+ V
Sbjct: 326 PDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRV 385

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK--AVSIDSVSLSSVLGVCAREG 235
           FE+M + NEV++ AM+S LA   R  E+L +F+ M ++  AV  + +S   VL  C   G
Sbjct: 386 FEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAG 445

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
              E                 Q    ++   G    +   + ++D+ A+ G +  A    
Sbjct: 446 LVDEGR---------------QLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFI 490

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
             +PE+      V++       Q  + +++ +R+     E + + S N +++
Sbjct: 491 EKMPEKPD---EVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIIS 539


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 178/591 (30%), Positives = 306/591 (51%), Gaps = 56/591 (9%)

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           M++   +  R ++ALE++  M  + +  D   ++S++  C                 K  
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAAC----------------TKLQ 44

Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
               G+++H   I  GF  D+ L  +LL MYAK G +D A+ +F  +  + + +W+ +IA
Sbjct: 45  ALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIA 104

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------------- 358
            Y +  +   A+ L +RM + G EP+ VT    L  C     +  GR             
Sbjct: 105 AYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQ 164

Query: 359 ----------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM- 395
                                 ++F+ M + +V S+ AM+S+Y Q+  H EA++LF  M 
Sbjct: 165 DDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMS 224

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
           +   ++P+  T A IL +   +G LE G++VH          +  V + L+ +Y KC   
Sbjct: 225 KVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSP 284

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
             A +VF  +   +++ W SMIA  + +    EA   FK+M   ++ P+  SF++ L++C
Sbjct: 285 VEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNAC 341

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           A L +  +GR++H ++ +    +   + ++L+ MY +CG +  AR+ F+ M  ++  + N
Sbjct: 342 ALLGALDEGREIHHRVVEANLASPQ-METSLLSMYARCGSLDDARRVFNRMKTRDAFSCN 400

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI  + Q+G   +A+R+Y+ M   G+  D ITFV++L ACSH+ LV    +   S+ +D
Sbjct: 401 AMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMD 460

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           HGV P+++HY CM+D LGR+G   +AE L++ MP + D V W  LLS C+ H ++   +R
Sbjct: 461 HGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGER 520

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           AA ++F L P  + PY  L+N+Y++  R+DD R VR+ M E  + +  A S
Sbjct: 521 AARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVS 571



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 253/540 (46%), Gaps = 58/540 (10%)

Query: 91  LISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIG 150
           +I+A VR G   +AL ++ +M   G V     + S+  A T L  +E GRR H  +I  G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 151 LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
              +I +  ALL +YAKCG    A  VFE M   +   ++++++  A+  R   A+ ++R
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120

Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
            MI + V  + V+ +  LG CA         V   +D        G+ +H   +      
Sbjct: 121 RMIAEGVEPNVVTFACALGGCA--------SVAGLAD--------GRAIHQRILASKVPQ 164

Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM- 329
           D  L +SLL+MY K  +M  A  +F  +  R+V S+  MI+ Y Q  +  +A+EL  RM 
Sbjct: 165 DDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMS 224

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTG-------------------------------- 357
           K    EP+  T   +L A    G+++ G                                
Sbjct: 225 KVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSP 284

Query: 358 ---REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
              R++FDSM + +V SW +M+++Y+Q  N +EA+ LF+ M    V+P   + +  L++C
Sbjct: 285 VEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNAC 341

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
           A +G L+ G+++H   ++ A+     + + L+ +Y++C   + A RVF+R+   D    N
Sbjct: 342 ALLGALDEGREIHHRVVE-ANLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCN 400

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           +MIA  + +    +A   +++M Q  +     +F +VL +C+  S     R     +  D
Sbjct: 401 AMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMD 460

Query: 535 -GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVR 592
            G V  +     ++++  + G +  A +  + M +  + V W  ++ G  ++G  D   R
Sbjct: 461 HGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGER 520



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 138/581 (23%), Positives = 254/581 (43%), Gaps = 104/581 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH H++  G   D  L   L+++Y+KC +   A+ +F+ M  KD+++W++I      
Sbjct: 49  GRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSI------ 102

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    I+A  R G  E A+ +Y +M  EG  P  +T A  
Sbjct: 103 -------------------------IAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACA 137

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                ++  +  GR  H  ++   + ++  + ++LL++Y KC     A  VFE M   N 
Sbjct: 138 LGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNV 197

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            ++TAM+S   +     EALE+F  M + +A+  ++ + +++LG  A EG G        
Sbjct: 198 RSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILG--AVEGLG-------- 247

Query: 246 SDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                  N+  G++VH      GF+ ++ + N+L+ MY K G    A  +F ++  R+V+
Sbjct: 248 -------NLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           SW  MIA Y Q     +A+ L +RM     EP  V+  + L AC   G +  GRE+    
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRV 357

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         F+ M +    S NAM+++++Q    K+A++
Sbjct: 358 VEANLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALR 417

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAASLKTASHIDNYVASGLIG 447
           ++R+M+  G+  D  T   +L +C+   ++   +   Q           +++Y+   ++ 
Sbjct: 418 IYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLC--MVD 475

Query: 448 IYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLS----LNSLDIEAFMFFKQMRQNEMY 502
           +  +  R   AE +   +P + D V W ++++G      L+  +  A   F      E+ 
Sbjct: 476 VLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVF------ELA 529

Query: 503 PTQFSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFV 542
           P +      LS+    +  F   R+V  ++E+ G    + V
Sbjct: 530 PAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAV 570


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 193/623 (30%), Positives = 312/623 (50%), Gaps = 53/623 (8%)

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           ++SL A+ G    AV     +  P+      M+ G A       AL  +R M+      D
Sbjct: 48  VVSLAAE-GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
             +   V+  CAR G G++                G+  H + IKLG E D++  NSL+ 
Sbjct: 107 RFTFPVVVKCCARLG-GLD---------------EGRAAHGMVIKLGLEHDVYTCNSLVA 150

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEV 339
            YAK G ++ AE +F  +P R +V+WN+M+ GY      + A+   Q M  +   + D V
Sbjct: 151 FYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSV 210

Query: 340 TSINMLVAC----------------VRSG---DIKTG----------------REMFDSM 364
             I  L AC                +R G   DIK G                R +F +M
Sbjct: 211 GIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATM 270

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           P  +V +WN M+  Y+ +E   EA   F +M+  G++ +  T   +L++CA       G+
Sbjct: 271 PLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGR 330

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
            VH   ++        + + L+ +Y K  + E +E++F +I    +V WN+MIA      
Sbjct: 331 SVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKE 390

Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
           +  EA   F ++    +YP  F+ +TV+ +   L S    RQ+H+ I   GY  +  + +
Sbjct: 391 MYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMN 450

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
           A++ MY + GD+  +R+ FD M  K+ ++WN MI GYA +G G  A+ ++ +M  +G++P
Sbjct: 451 AVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQP 510

Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEML 664
           ++ TFV++LTACS SGLVD G   FN M  ++G+ P ++HY CM D LGR G   E    
Sbjct: 511 NESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQF 570

Query: 665 IDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRW 724
           I+ MP      +W  LL++ R   ++ +A+ AAE +F+L+  N+  Y +L+++Y+  GRW
Sbjct: 571 IESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRW 630

Query: 725 DDLRAVRELMSENCIVKDPAYSL 747
           +D+  VR LM E  + +    SL
Sbjct: 631 EDVERVRLLMKEKGLRRTEPISL 653



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 240/497 (48%), Gaps = 55/497 (11%)

Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
           Y  M  +G  P   T   V K    L  ++ GR  HG+VIK+GL+ ++Y  N+L++ YAK
Sbjct: 95  YRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAK 154

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI--DSVSLS 225
            G  + A  VF+ M   + VT+  M+ G         AL  F+ M   A+ +  DSV + 
Sbjct: 155 LGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEM-HDALEVQHDSVGII 213

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
           + L  C  E               FS ++ G+++H   I+ G E D+ +  SLLDMY K 
Sbjct: 214 AALAACCLE---------------FS-SMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKC 257

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
           G++  A  +F+ +P R+VV+WN MI GY    +  +A +   +M++ G + + VT+IN+L
Sbjct: 258 GEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLL 317

Query: 346 VACVRS-----------------------------------GDIKTGREMFDSMPSPSVS 370
            AC ++                                   G +++  ++F  + + ++ 
Sbjct: 318 AACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLV 377

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           SWN M+++Y   E + EAI LF E+  + + PD  T++ ++ +   +G L   +Q+H+  
Sbjct: 378 SWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYI 437

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
           +      +  + + ++ +Y++      +  +F ++   D++ WN+MI G +++     A 
Sbjct: 438 IGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTAL 497

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEM 549
             F +M+ N + P + +F +VL++C+      +G    +  +++ G +  I     + ++
Sbjct: 498 EMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDL 557

Query: 550 YCKCGDIYGARQFFDMM 566
             + GD+    QF + M
Sbjct: 558 LGREGDLREVLQFIESM 574



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 207/454 (45%), Gaps = 85/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  H  +++ GL  D + CN L+  Y+K      A+ +FD MP +DI +WN        
Sbjct: 126 GRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNI------- 178

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   ++   V NGL   AL+ + +M ++     H ++  +
Sbjct: 179 ------------------------MVDGYVSNGLGSLALACFQEM-HDALEVQHDSVGII 213

Query: 127 FKASTALLDVE--HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
              +   L+     G+  HG VI+ GL+++I V  +LL +Y KCG   +A  VF  M   
Sbjct: 214 AALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
             VT+  M+ G A  +R  EA + F  M  + + ++ V+  ++L  CA+     ES ++ 
Sbjct: 274 TVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQ----TESSLY- 328

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+ VH   ++  F   + L  +LL+MY K G ++S+E IF  +  +++V
Sbjct: 329 -----------GRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLV 377

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------- 349
           SWN MIA Y  K   T+AI L   + +    PD  T   ++ A V               
Sbjct: 378 SWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYI 437

Query: 350 --------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               RSGD+   RE+FD M S  V SWN M+  Y+     K A+
Sbjct: 438 IGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTAL 497

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           ++F EM++ G++P+ +T   +L++C+  G+++ G
Sbjct: 498 EMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 144/287 (50%), Gaps = 1/287 (0%)

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
             P   +S +++V+    G +    E   ++  P     N M+  ++ +     A+  +R
Sbjct: 37  LPPKRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYR 96

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
            M   G +PDR T  +++  CA +G L+ G+  H   +K     D Y  + L+  Y+K  
Sbjct: 97  GMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLG 156

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN-EMYPTQFSFATVL 512
             E AERVF  +P  DIV WN M+ G   N L   A   F++M    E+          L
Sbjct: 157 LVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAAL 216

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           ++C    SS QG+++H  + + G   DI VG++L++MYCKCG++  AR  F  M  +  V
Sbjct: 217 AACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVV 276

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           TWN MI GYA N   DEA   +  M A G++ + +T + +L AC+ +
Sbjct: 277 TWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQT 323



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 176/394 (44%), Gaps = 52/394 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +++R+GL  D  +   L+++Y KC                              
Sbjct: 228 GKEIHGYVIRHGLEQDIKVGTSLLDMYCKCG----------------------------- 258

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             ++ +A  +F  MP R VV+WN +I     N   ++A   + +M  EG     +T  ++
Sbjct: 259 --EVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINL 316

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A        +GR  HG V++     ++ +  ALL +Y K G  + +  +F +++    
Sbjct: 317 LAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTL 376

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M++     +   EA+ +F  ++ + +  D  ++S+V          V + V   S
Sbjct: 377 VSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTV----------VPAFVLLGS 426

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   H +Q+H   I LG+  +  + N++L MYA++GD+ ++  IF  +  + V+SW
Sbjct: 427 LR------HCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISW 480

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N MI GY    Q   A+E+   MK  G +P+E T +++L AC  SG +  G   F+ M  
Sbjct: 481 NTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQ 540

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                P +  +  M     +  + +E ++    M
Sbjct: 541 EYGMIPQIEHYGCMTDLLGREGDLREVLQFIESM 574


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 195/588 (33%), Positives = 315/588 (53%), Gaps = 41/588 (6%)

Query: 162 LSLYAKCGWTKHAVPVFEEMSEPNEV--TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
           +S Y + G   +A  VF+    P     ++ AM+S   ++ +  +AL +F  M ++    
Sbjct: 26  ISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQR---- 81

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
           ++VS + ++    + G  + +D     D    RNV                      S++
Sbjct: 82  NTVSFNGMISGYVKNG--MVADARKVFDVMPERNVVSW------------------TSMV 121

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
             Y + G ++ AE +F  +P R+VVSW VMI G  ++ +   A +L   +     E D V
Sbjct: 122 RGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIP----EKDVV 177

Query: 340 TSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
              NM+    + G +   RE+FD M   +V +W  M+S Y+++     A KLF  M    
Sbjct: 178 VVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVM---- 233

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQRNELA 458
             P+R  ++    +   MG  +SG+   A  L  A  +   VA + +I  +        A
Sbjct: 234 --PERNEVSW---TAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRA 288

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
             +F  + E D   WN+MI       LD+EA   F +M++  +     S  +VLS CA L
Sbjct: 289 RMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASL 348

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           +S   GRQVHA++ +  +  D++V S LI MY KCGD+  A+  F+    K+ V WN MI
Sbjct: 349 ASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMI 408

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GY+Q+G G+EA+ ++ DM +SGV+PD++TF+ +L+ACS+SG V  G EIF +M+  + V
Sbjct: 409 TGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQV 468

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
           EP ++HY CM+D LGRAG   EA  L+++MP + D ++W  LL +CR H  + LA+ A E
Sbjct: 469 EPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVE 528

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +L +L+PKN+ PY LL+++Y++ GRW D+  +R+ ++   ++K P  S
Sbjct: 529 KLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRR-VIKFPGCS 575



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 176/638 (27%), Positives = 286/638 (44%), Gaps = 123/638 (19%)

Query: 11  HAHILRNGLFDDTFLCNRL--IELYSKCNNTHSAQHLFDK--MPHKDIYSWNAILSAQCK 66
           +A  LR  +     LC+    I  Y +  + H+A+ +FD   +P + I SWNA++SA  +
Sbjct: 5   YAATLRCRMVQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFE 64

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S     A  LFD+MP+RN VS+N +IS  V+NG+   A  V++ M               
Sbjct: 65  SHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMP-------------- 110

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                                    ++N+    +++  Y + G  + A  +F EM   N 
Sbjct: 111 -------------------------ERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNV 145

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
           V++T M+ GL K  R+ +A ++F ++  K    D V +++++G   + G   E+ ++F  
Sbjct: 146 VSWTVMIGGLLKESRIDDAKKLFDMIPEK----DVVVVTNMIGGYCQVGRLDEARELF-- 199

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D    RNV                      +++  YAKNG +D A  +F  +PER+ VS
Sbjct: 200 -DEMKVRNVFTW------------------TTMVSGYAKNGRVDVARKLFEVMPERNEVS 240

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR-------SGDIKTGR 358
           W  M+ GY Q  +  +A EL + M            +  +VAC         +G++   R
Sbjct: 241 WTAMLMGYTQSGRMKEAFELFEAM-----------PVKWIVACNEMILQFGLAGEMHRAR 289

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            MF+ M      +WNAM+  + +     EA+ LF  MQ  GV  +  ++  +LS CA++ 
Sbjct: 290 MMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLA 349

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            L+ G+QVHA  +++    D YVAS LI +Y KC     A+ +F+R    D+V WNSMI 
Sbjct: 350 SLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMIT 409

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G S + L  EA   F  M  + + P + +F  VLS+C+      +G ++   ++    V 
Sbjct: 410 GYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVE 469

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
                   IE Y    D+ G                        + G  DEA+ L + M 
Sbjct: 470 ------PGIEHYACMVDLLG------------------------RAGRVDEAMELVEKM- 498

Query: 599 ASGVKPDDITFVAILTACSHS---GLVDVGVEIFNSMQ 633
              ++PD I + A+L AC +     L +V VE    ++
Sbjct: 499 --PMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLE 534



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 227/489 (46%), Gaps = 85/489 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNR-------LIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
           G++   H  R  +FD+T L  R       ++  Y + +    A  LFD+MP ++  S+N 
Sbjct: 30  GRIGDIHNARK-VFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNG 88

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           ++S   K+  +  A K+FD MPERNVVSW +++   V+ G+ E+A  ++ +M     V  
Sbjct: 89  MISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSW 148

Query: 120 HITLASVFKAS-----TALLDVEHGRRCHGLVIKIG-------LD-----------KNIY 156
            + +  + K S       L D+   +    +   IG       LD           +N++
Sbjct: 149 TVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVF 208

Query: 157 VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF------- 209
               ++S YAK G    A  +FE M E NEV++TAM+ G  ++ R+ EA E+F       
Sbjct: 209 TWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKW 268

Query: 210 --------------------RLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDN 248
                               R+M       D  + ++++ V  R+G  +E+  +FA+   
Sbjct: 269 IVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQR 328

Query: 249 K-----FSRNV-------------HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           +     F   +             HG+QVH   ++  F+ DL++++ L+ MY K GD+  
Sbjct: 329 EGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVR 388

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A+ IF+    + VV WN MI GY Q     +A+ +   M S G +PDEVT I +L AC  
Sbjct: 389 AKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSY 448

Query: 351 SGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
           SG +K G E+F++M       P +  +  M+    ++    EA++L  +M    ++PD  
Sbjct: 449 SGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMP---MEPDAI 505

Query: 406 TLAIILSSC 414
               +L +C
Sbjct: 506 VWGALLGAC 514



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 48/239 (20%)

Query: 544 SALIEMYCKCGDIYGARQ---------------------------------FFDMMHGKN 570
           ++ I  Y + GDI+ AR+                                  FD M  +N
Sbjct: 23  TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRN 82

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
           TV++N MI GY +NG   +A +++  M    V    +++ +++      G+V+   ++F 
Sbjct: 83  TVSFNGMISGYVKNGMVADARKVFDVMPERNV----VSWTSMVRGYVQEGMVEEAEKLFW 138

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
            M   + V      +T MI  L +     +A+ L D +P KD  V+  ++   C++    
Sbjct: 139 EMPRRNVVS-----WTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVG--- 190

Query: 691 RLAKRAAEELF-RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSLG 748
           RL +  A ELF  +  +N   ++ + + Y+  GR D  R + E+M E   V   A  +G
Sbjct: 191 RLDE--ARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMG 247


>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like isoform 1 [Cucumis sativus]
          Length = 703

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 195/691 (28%), Positives = 332/691 (48%), Gaps = 117/691 (16%)

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW---------- 170
           +++ S  K   +   +  G++ H +V+K G + N ++ N+L+++Y KCG           
Sbjct: 62  LSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDS 121

Query: 171 ---------------------TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
                                 ++A  +F +M E   V++T M+ GLA+ D   EA+E+F
Sbjct: 122 CSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVF 181

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
           + M    V+ + V+++SV+  C+  G G+                + + +H L IKL F 
Sbjct: 182 KDMRSAGVAPNEVTMASVMSACSHIG-GIW---------------NCRMLHALVIKLHFF 225

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
             + +S +LL MY     +   + +F+ +P R+ VSWNVM+ GY                
Sbjct: 226 GLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGY---------------- 269

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                              V+SG +   RE+F+ +P   V SW  M+  + Q +  ++A+
Sbjct: 270 -------------------VKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKAL 310

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            L+  M+   + P+   +  +LS+C     +E G+Q H+  +K      +++ + +I  Y
Sbjct: 311 LLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFY 370

Query: 450 SKCQRNEL-------------------------------AERVFHRIPELDIVCWNSMIA 478
           + C+R +L                               A ++F  +PE D+  W++MI+
Sbjct: 371 AACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMIS 430

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI-EKDGYV 537
           G + N L   A   F  M  +++ P + +  +V S+ A L    +GR  H  +  K   +
Sbjct: 431 GYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPL 490

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT--WNEMIHGYAQNGYGDEAVRLYK 595
           ND  + +A+I+MY KCG I  A   F  +  K +    WN +I G A +G+ + ++ ++ 
Sbjct: 491 ND-NLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFS 549

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
           ++    +K + ITF+ +L+AC H+GLV+VG   F SM+  HGVEP + HY C++D LGR 
Sbjct: 550 NLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRV 609

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLA 715
           G   EAE ++  MP K D VIW  LL+S R H  V + +RAAE L RL P +     LL+
Sbjct: 610 GRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLS 669

Query: 716 NIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           N+Y+  G W+D   VR  +    +++ P YS
Sbjct: 670 NLYADAGLWEDAALVRRAIQSQRMIRSPGYS 700



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 148/570 (25%), Positives = 247/570 (43%), Gaps = 109/570 (19%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ +HA +L+ G   +TF+ N LI +Y KC    SA+ LFD     D  S N ++S   
Sbjct: 79  SGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYV 138

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   LE A +LF +MPER  VS+  +I  L +N    +A+ V+  M + G  P  +T+AS
Sbjct: 139 KLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMAS 198

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A + +  + + R  H LVIK+     + ++  LL +Y      K    +F EM   N
Sbjct: 199 VMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRN 258

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFR-----------LMI---------RKAVSIDSVSLS 225
            V++  M+ G  K+  V +A E+F            +MI         RKA+ + S    
Sbjct: 259 TVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRK 318

Query: 226 S------VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF----------- 268
           S      VL V     CG    +             G+Q H L +K GF           
Sbjct: 319 SDLHPNEVLIVDLLSACGQSVSI-----------EEGRQFHSLIVKNGFVCFDFIQATII 367

Query: 269 --------------------EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                               ++ L  SN ++  + KNG +D A  IF  +PE+ V SW+ 
Sbjct: 368 SFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWST 427

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------- 358
           MI+GY Q      A++L   M     EP+E+T +++  A    G +  GR          
Sbjct: 428 MISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKV 487

Query: 359 -------------------------EMFDSM--PSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                    ++F  +   + +VS WNA++   +   +   ++++
Sbjct: 488 IPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEI 547

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIY 449
           F  +Q R +K +  T   +LS+C   G++E G++ +  S+KT   ++  +     L+ + 
Sbjct: 548 FSNLQRRSIKLNSITFLGVLSACCHAGLVEVGER-YFWSMKTQHGVEPNIKHYGCLVDLL 606

Query: 450 SKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
            +  R   AE +   +P + D+V W +++A
Sbjct: 607 GRVGRLREAEEIVRTMPMKADVVIWGTLLA 636



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 209/465 (44%), Gaps = 61/465 (13%)

Query: 3   AHVAG----KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           +H+ G    ++LHA +++   F    +   L+ +Y   ++    + LF++MP ++  SWN
Sbjct: 204 SHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWN 263

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
            +L    KS  ++ A +LF+ +PER+V SW  +I   V+     KAL +Y+ M      P
Sbjct: 264 VMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHP 323

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC---------- 168
             + +  +  A    + +E GR+ H L++K G     ++   ++S YA C          
Sbjct: 324 NEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQY 383

Query: 169 ----------------GWTK-----HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
                           G+TK      A  +F+ M E +  +++ M+SG A+ +    AL+
Sbjct: 384 QMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALD 443

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +F  MI   V  + +++ SV    A  G                +   G+  H       
Sbjct: 444 LFHGMIDSKVEPNEITMVSVFSAIAALG----------------KLPEGRWAHEYVCNKV 487

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER--SVVSWNVMIAGYGQKYQSTKAIEL 325
              + +LS +++DMYAK G +D+A  +F  + ++  +V  WN +I G      +  ++E+
Sbjct: 488 IPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEI 547

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYS 380
              ++    + + +T + +L AC  +G ++ G   F SM +     P++  +  ++    
Sbjct: 548 FSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLG 607

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           +    +EA ++ R M    +K D      +L+S    G +E G++
Sbjct: 608 RVGRLREAEEIVRTMP---MKADVVIWGTLLASSRTHGEVEIGER 649



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 151/343 (44%), Gaps = 74/343 (21%)

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS------CAA 416
           S P P    W   +S++S  E+    ++      F   +P  ++L   LS       CA+
Sbjct: 19  SFPPPLYLKW---VSTFSTIESSPRPLQNLSS--FLNGRPSSSSLDCELSVVSALKYCAS 73

Query: 417 MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC------------------------ 452
              + SG+Q+HA  LK   + + ++ + LI +Y KC                        
Sbjct: 74  SSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIM 133

Query: 453 -------QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
                  ++ E A ++F ++PE   V + +MI GL+ N    EA   FK MR   + P +
Sbjct: 134 MSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNE 193

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            + A+V+S+C+ +   +  R +HA + K  +   + + + L+ MYC    +   ++ F+ 
Sbjct: 194 VTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNE 253

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDE-------------------------------AVRLY 594
           M  +NTV+WN M+ GY ++G  D+                               A+ LY
Sbjct: 254 MPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLY 313

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
             M  S + P+++  V +L+AC  S  ++ G + F+S+ + +G
Sbjct: 314 SAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQ-FHSLIVKNG 355



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 58/261 (22%)

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           + S  + L  CA  S+   G+Q+HA + K G+ ++ F+ ++LI MY KCG +  AR  FD
Sbjct: 61  ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120

Query: 565 ------------MMHG-------------------KNTVTWNEMIHGYAQNGYGDEAVRL 593
                       MM G                   +  V++  MI G AQN    EA+ +
Sbjct: 121 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI-----------L 642
           +KDM ++GV P+++T  ++++ACSH G       I+N   L   V  +           L
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIG------GIWNCRMLHALVIKLHFFGLVLISTNL 234

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
            H  C+   L       + + L +EMP ++  V W V+L     +    L  +A E   R
Sbjct: 235 LHMYCVFSSL------KDTKRLFNEMPVRNT-VSWNVMLKG---YVKSGLVDQARELFER 284

Query: 703 LDPKNSAPYSLLANIYSSLGR 723
           +  ++   ++++ + +  + R
Sbjct: 285 IPERDVFSWAIMIDGFVQMKR 305


>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like [Cucumis sativus]
          Length = 874

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 195/691 (28%), Positives = 332/691 (48%), Gaps = 117/691 (16%)

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW---------- 170
           +++ S  K   +   +  G++ H +V+K G + N ++ N+L+++Y KCG           
Sbjct: 233 LSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDS 292

Query: 171 ---------------------TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
                                 ++A  +F +M E   V++T M+ GLA+ D   EA+E+F
Sbjct: 293 CSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVF 352

Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
           + M    V+ + V+++SV+  C+  G G+                + + +H L IKL F 
Sbjct: 353 KDMRSAGVAPNEVTMASVMSACSHIG-GIW---------------NCRMLHALVIKLHFF 396

Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
             + +S +LL MY     +   + +F+ +P R+ VSWNVM+ GY                
Sbjct: 397 GLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGY---------------- 440

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                              V+SG +   RE+F+ +P   V SW  M+  + Q +  ++A+
Sbjct: 441 -------------------VKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKAL 481

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
            L+  M+   + P+   +  +LS+C     +E G+Q H+  +K      +++ + +I  Y
Sbjct: 482 LLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFY 541

Query: 450 SKCQRNEL-------------------------------AERVFHRIPELDIVCWNSMIA 478
           + C+R +L                               A ++F  +PE D+  W++MI+
Sbjct: 542 AACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMIS 601

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI-EKDGYV 537
           G + N L   A   F  M  +++ P + +  +V S+ A L    +GR  H  +  K   +
Sbjct: 602 GYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPL 661

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT--WNEMIHGYAQNGYGDEAVRLYK 595
           ND  + +A+I+MY KCG I  A   F  +  K +    WN +I G A +G+ + ++ ++ 
Sbjct: 662 ND-NLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFS 720

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
           ++    +K + ITF+ +L+AC H+GLV+VG   F SM+  HGVEP + HY C++D LGR 
Sbjct: 721 NLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRV 780

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLA 715
           G   EAE ++  MP K D VIW  LL+S R H  V + +RAAE L RL P +     LL+
Sbjct: 781 GRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLS 840

Query: 716 NIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           N+Y+  G W+D   VR  +    +++ P YS
Sbjct: 841 NLYADAGLWEDAALVRRAIQSQRMIRSPGYS 871



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 146/570 (25%), Positives = 246/570 (43%), Gaps = 109/570 (19%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ +HA +L+ G   +TF+ N LI +Y KC    SA+ LFD     D  S N ++S   
Sbjct: 250 SGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYV 309

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   LE A +LF +MPER  VS+  +I  L +N    +A+ V+  M + G  P  +T+AS
Sbjct: 310 KLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMAS 369

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A + +  + + R  H LVIK+     + ++  LL +Y      K    +F EM   N
Sbjct: 370 VMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRN 429

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLM--------------------IRKAVSIDSVSLS 225
            V++  M+ G  K+  V +A E+F  +                    +RKA+ + S    
Sbjct: 430 TVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRK 489

Query: 226 S------VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF----------- 268
           S      VL V     CG    +             G+Q H L +K GF           
Sbjct: 490 SDLHPNEVLIVDLLSACGQSVSI-----------EEGRQFHSLIVKNGFVCFDFIQATII 538

Query: 269 --------------------EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                               ++ L  SN ++  + KNG +D A  IF  +PE+ V SW+ 
Sbjct: 539 SFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWST 598

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------- 358
           MI+GY Q      A++L   M     EP+E+T +++  A    G +  GR          
Sbjct: 599 MISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKV 658

Query: 359 -------------------------EMFDSM--PSPSVSSWNAMLSSYSQSENHKEAIKL 391
                                    ++F  +   + +VS WNA++   +   +   ++++
Sbjct: 659 IPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEI 718

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIY 449
           F  +Q R +K +  T   +LS+C   G++E G++ +  S+KT   ++  +     L+ + 
Sbjct: 719 FSNLQRRSIKLNSITFLGVLSACCHAGLVEVGER-YFWSMKTQHGVEPNIKHYGCLVDLL 777

Query: 450 SKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
            +  R   AE +   +P + D+V W +++A
Sbjct: 778 GRVGRLREAEEIVRTMPMKADVVIWGTLLA 807



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 209/465 (44%), Gaps = 61/465 (13%)

Query: 3   AHVAG----KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           +H+ G    ++LHA +++   F    +   L+ +Y   ++    + LF++MP ++  SWN
Sbjct: 375 SHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWN 434

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
            +L    KS  ++ A +LF+ +PER+V SW  +I   V+     KAL +Y+ M      P
Sbjct: 435 VMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHP 494

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC---------- 168
             + +  +  A    + +E GR+ H L++K G     ++   ++S YA C          
Sbjct: 495 NEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQY 554

Query: 169 ----------------GWTK-----HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
                           G+TK      A  +F+ M E +  +++ M+SG A+ +    AL+
Sbjct: 555 QMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALD 614

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +F  MI   V  + +++ SV    A  G                +   G+  H       
Sbjct: 615 LFHGMIDSKVEPNEITMVSVFSAIAALG----------------KLPEGRWAHEYVCNKV 658

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER--SVVSWNVMIAGYGQKYQSTKAIEL 325
              + +LS +++DMYAK G +D+A  +F  + ++  +V  WN +I G      +  ++E+
Sbjct: 659 IPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEI 718

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYS 380
              ++    + + +T + +L AC  +G ++ G   F SM +     P++  +  ++    
Sbjct: 719 FSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLG 778

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           +    +EA ++ R M    +K D      +L+S    G +E G++
Sbjct: 779 RVGRLREAEEIVRTMP---MKADVVIWGTLLASSRTHGEVEIGER 820



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 58/261 (22%)

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           + S  + L  CA  S+   G+Q+HA + K G+ ++ F+ ++LI MY KCG +  AR  FD
Sbjct: 232 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 291

Query: 565 ------------MMHG-------------------KNTVTWNEMIHGYAQNGYGDEAVRL 593
                       MM G                   +  V++  MI G AQN    EA+ +
Sbjct: 292 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 351

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI-----------L 642
           +KDM ++GV P+++T  ++++ACSH G       I+N   L   V  +           L
Sbjct: 352 FKDMRSAGVAPNEVTMASVMSACSHIG------GIWNCRMLHALVIKLHFFGLVLISTNL 405

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
            H  C+   L       + + L +EMP ++  V W V+L     +    L  +A E   R
Sbjct: 406 LHMYCVFSSL------KDTKRLFNEMPVRNT-VSWNVMLKG---YVKSGLVDQARELFER 455

Query: 703 LDPKNSAPYSLLANIYSSLGR 723
           +  ++   ++++ + +  + R
Sbjct: 456 IPERDVFSWAIMIDGFVQMKR 476


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 185/560 (33%), Positives = 288/560 (51%), Gaps = 70/560 (12%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKN--GDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           +Q+H  TI  G  ++  +   ++    K+  GDM+ A ++F  +P  +   WN MI GY 
Sbjct: 36  KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYS 95

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINML--------VACVR---------------- 350
           +      A+ +   M   G  PDE T   +L        V C R                
Sbjct: 96  RVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVF 155

Query: 351 -----------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                      SG++   R +FD      V +WN M+S Y++S+   E++KLF EM+   
Sbjct: 156 VQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMR 215

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVH--AASLKTA-------SHIDNYVASG----LI 446
           V P   TL  +LS+C+ +  L  GK+VH     LK         + ID Y A G     +
Sbjct: 216 VLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTAL 275

Query: 447 GIYSKCQRNE------------------LAERVFHRIPELDIVCWNSMIAG-LSLNSLDI 487
           GI+   +  +                  LA   F ++PE D V W +MI G L +N    
Sbjct: 276 GIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFK- 334

Query: 488 EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
           E    F++M+   + P +F+  ++L++CA L +   G  + A I+K+    D FVG+ALI
Sbjct: 335 EVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALI 394

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
           +MY  CG++  A + F+ M  ++ ++W  +I G A NGYG+EA+ ++  M+ + + PD++
Sbjct: 395 DMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEV 454

Query: 608 TFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
           T + +L AC+HSG+VD G + F  M   HG+EP + HY CM+D LGRAGH  EA  +I  
Sbjct: 455 TCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKN 514

Query: 668 MPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDL 727
           MP K + ++W  LL +CR+H +  +A+ AA+++  L+P+N A Y LL NIY++  RW+ L
Sbjct: 515 MPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKL 574

Query: 728 RAVRELMSENCIVKDPAYSL 747
             VR+LM +  I K P  SL
Sbjct: 575 HEVRKLMMDRGIKKTPGCSL 594



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 229/519 (44%), Gaps = 93/519 (17%)

Query: 58  NAILSAQ-----CKSD--DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
           N I+ AQ     CK +  D+E+A  +FD MP  N   WNN+I    R G    A+S+Y +
Sbjct: 50  NPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCE 109

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M   G +P   T   + K  T    V+ GR  H  ++K+G   N++V NAL+ LY+  G 
Sbjct: 110 MLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGE 169

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              A  VF+  S+ + VT+  M+SG  ++ +  E++++F  M R  V   S++L SVL  
Sbjct: 170 VSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSA 229

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           C++                   NV G++VH     L  E    L N+L+DMYA  GDMD+
Sbjct: 230 CSKLK---------------DLNV-GKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDT 273

Query: 291 AEVIFSN-------------------------------LPERSVVSWNVMIAGYGQKYQS 319
           A  IF N                               +PER  VSW  MI GY Q  + 
Sbjct: 274 ALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRF 333

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--------------------- 358
            + + L + M++   +PDE T +++L AC   G ++ G                      
Sbjct: 334 KEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNAL 393

Query: 359 --------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
                          +F++MP     SW A++   + +   +EA+ +F +M    + PD 
Sbjct: 394 IDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDE 453

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQRNELAERVF 462
            T   +L +C   G+++ GK+   A + T   I+  VA    ++ +  +    + A  V 
Sbjct: 454 VTCIGVLCACTHSGMVDKGKKFF-ARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVI 512

Query: 463 HRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
             +P + + + W S++    ++  +  A M  +Q+ + E
Sbjct: 513 KNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELE 551



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 207/486 (42%), Gaps = 87/486 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH HI++ G   + F+ N LI LYS       A+ +FD+    D+ +WN ++S   +
Sbjct: 138 GRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNR 197

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S   + + KLFDEM    V                               +P+ ITL SV
Sbjct: 198 SKQFDESMKLFDEMERMRV-------------------------------LPSSITLVSV 226

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG----------------- 169
             A + L D+  G+R H  V  + ++    + NAL+ +YA CG                 
Sbjct: 227 LSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDV 286

Query: 170 --WTK------------HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
             WT              A   F++M E + V++TAM+ G  + +R  E L +FR M   
Sbjct: 287 ISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAA 346

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            +  D  ++ S+L  CA  G  +E                G+ +     K   + D  + 
Sbjct: 347 NIKPDEFTMVSILTACAHLG-ALEL---------------GEWIKAYIDKNEIKIDSFVG 390

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+L+DMY   G+++ A  IF+ +P R  +SW  +I G        +A+++  +M      
Sbjct: 391 NALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASIT 450

Query: 336 PDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIK 390
           PDEVT I +L AC  SG +  G++ F  M +     P+V+ +  M+    ++ + KEA +
Sbjct: 451 PDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHE 510

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           + + M    VKP+      +L +C      E  +      L+     +  V   L  IY+
Sbjct: 511 VIKNMP---VKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPE-NGAVYVLLCNIYA 566

Query: 451 KCQRNE 456
            C R E
Sbjct: 567 ACNRWE 572



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/419 (23%), Positives = 192/419 (45%), Gaps = 35/419 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H ++    +     L N LI++Y+ C +  +A  +FD M  +D+ SW AI++    
Sbjct: 239 GKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTN 298

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +  A   FD+MPER+ VSW  +I   ++    ++ LS++ +M      P   T+ S+
Sbjct: 299 LGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSI 358

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L  +E G      + K  +  + +V NAL+ +Y  CG  + A+ +F  M   ++
Sbjct: 359 LTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDK 418

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TA++ GLA      EAL+MF  M++ +++ D V+   VL  C   G   +   F   
Sbjct: 419 ISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKF--- 475

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER-SVVS 305
              F+R         +T + G E ++     ++D+  + G +  A  +  N+P + + + 
Sbjct: 476 ---FAR---------MTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIV 523

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE----VTSINMLVACVRSGDIKTGREM- 360
           W  ++ G  + ++  +  E+  + +    EP+     V   N+  AC R   +   R++ 
Sbjct: 524 WGSLL-GACRVHRDEEMAEMAAQ-QILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLM 581

Query: 361 ----FDSMPSPSVSSWNAMLSSYSQSEN-HKEAIKLFR-------EMQFRGVKPDRTTL 407
                   P  S+   N  +  +   +  H ++ +++        +++F G  PD + +
Sbjct: 582 MDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEV 640



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 11/221 (4%)

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK--CGDIYGARQFFDMMH 567
           +++ +C  ++   Q +Q+H+Q    G +++  V + +I   CK   GD+  AR  FD M 
Sbjct: 24  SLIKTCKSMA---QLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMP 80

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
           G N   WN MI GY++ G  + AV +Y +M+  GV PD+ T+  +L   +    V  G E
Sbjct: 81  GPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRE 140

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           + + + +  G    +     +I     +G    A  + D    K D V W V++S     
Sbjct: 141 LHDHI-VKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDR-SSKGDVVTWNVMISGYNRS 198

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSL-LANIYSSLGRWDDL 727
                + +  +E+ R+      P S+ L ++ S+  +  DL
Sbjct: 199 KQFDESMKLFDEMERM---RVLPSSITLVSVLSACSKLKDL 236


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 183/625 (29%), Positives = 309/625 (49%), Gaps = 52/625 (8%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           N ++  Y KCG  K A  VF  +  PN  ++T +++  A+       LE+ R M    V 
Sbjct: 120 NCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVW 179

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            ++V+L++V+G  +  G           D   +R +H +     T +L +  D+ L  +L
Sbjct: 180 PNAVTLATVIGAVSELG-----------DWDEARKIHARAA--ATCQLTY--DVVLVTAL 224

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +DMYAK GD+  AEV+F     + +   N MI+ Y Q   +  A+    R++  G +P++
Sbjct: 225 IDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQ 284

Query: 339 VTSINMLVACV-----------------------------------RSGDIKTGREMFDS 363
           VT   +  AC                                    R G ++  R +FD 
Sbjct: 285 VTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDR 344

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           MP  +V +WN M++ Y+Q     EA++L+  M+  GV+PD  T   +L SC+    L +G
Sbjct: 345 MPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAG 404

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR--IPELDIVCWNSMIAGLS 481
           + +H   +         V S LI +YS C     A  VFH+       ++ W +M+  L+
Sbjct: 405 RDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALT 464

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N     A   F++M    +     +F + + +C+ + +  +G  +  ++   GY+ D+ 
Sbjct: 465 RNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVV 524

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           +G++LI +Y KCG +  A + F  +  KN VTWN ++   +QNG    +  L ++M   G
Sbjct: 525 LGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDG 584

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
            +P+++T + +L  CSH+GLV   V  F SM   H + P  +HY C++D LGR+G   E 
Sbjct: 585 AQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEV 644

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           E  I   P   D V+W  LL SC +H++V    RAA  +  LDPKN++PY LL+N+++++
Sbjct: 645 EAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAI 704

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           G  D ++++ +L  E  + K+ + S
Sbjct: 705 GMLDAVKSLAKLAGERAMKKEQSRS 729



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 244/548 (44%), Gaps = 86/548 (15%)

Query: 8   KLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           K + AHI  +  F  D  L N ++E Y KC     A+ +F  + H ++Y           
Sbjct: 100 KTIQAHISHSKRFSGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVY----------- 148

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                               SW  L++A  +NG  +  L +  +M   G  P  +TLA+V
Sbjct: 149 --------------------SWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATV 188

Query: 127 FKASTALLDVEHGRRCHG-LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A + L D +  R+ H        L  ++ +  AL+ +YAKCG   HA  VF++    +
Sbjct: 189 IGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKD 248

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
                AM+S   +    V+A+  F  +    +  + V+ + +   CA    GV SD    
Sbjct: 249 LACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATN--GVYSD---- 302

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                      +  H   I      D+ ++ +L+ MY++ G ++ A  +F  +P ++VV+
Sbjct: 303 ----------ARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVT 352

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
           WNVMIAGY Q+  + +A++L   M++ G EPDE+T +N+L +C  +  +  GR++     
Sbjct: 353 WNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVV 412

Query: 361 ---FDS-----------------------------MPSPSVSSWNAMLSSYSQSENHKEA 388
              +DS                                 SV SW AML++ +++   + A
Sbjct: 413 DAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSA 472

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           + LFR+M   GVK +  T    + +C+++G L  G  +    + T   ID  + + LI +
Sbjct: 473 LALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINL 532

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y KC R + A  VFH +   +IV WN+++A  S N  +  +    ++M  +   P + + 
Sbjct: 533 YGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTL 592

Query: 509 ATVLSSCA 516
             +L  C+
Sbjct: 593 LNMLFGCS 600



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 128/294 (43%), Gaps = 44/294 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H H++  G      + + LI +YS C +   A  +F    HK + +         
Sbjct: 403 AGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVF----HKGVTT--------- 449

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                             +V+SW  +++AL RNG    AL+++ KM  EG     +T  S
Sbjct: 450 ----------------HSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVS 493

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A +++  +  G      VI  G   ++ +  +L++LY KCG   +A+ VF  +S  N
Sbjct: 494 TIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKN 553

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+  +++  ++      + E+ + M       + ++L ++L  C+  G      + A+
Sbjct: 554 IVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNG------LVAK 607

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           + + F   V+G   HCL          H    L+D+  ++G ++  E   S+ P
Sbjct: 608 AVSYFRSMVYG---HCLV-----PTSEHY-GCLVDLLGRSGQLEEVEAFISSKP 652



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V G  +   ++  G   D  L   LI LY KC     A  +F  +  K+I +WN IL+
Sbjct: 503 ALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILA 562

Query: 63  AQCKSDDLEFAYKLFDEM----PERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFV 117
           A  ++ +   + +L  EM     + N ++  N++     NGL  KA+S +  M      V
Sbjct: 563 ASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLV 622

Query: 118 PT 119
           PT
Sbjct: 623 PT 624


>gi|302761660|ref|XP_002964252.1| hypothetical protein SELMODRAFT_82268 [Selaginella moellendorffii]
 gi|300167981|gb|EFJ34585.1| hypothetical protein SELMODRAFT_82268 [Selaginella moellendorffii]
          Length = 740

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 210/753 (27%), Positives = 354/753 (47%), Gaps = 93/753 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA  +   L  +T L N LI +Y KC++   A+                       
Sbjct: 29  GRQLHAAAIARRLDRETLLANSLIAMYGKCHSLAEAE----------------------- 65

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   +LF  +  ++ V+WN +I A   NG    A+ +Y +M +       +T   V
Sbjct: 66  --------RLFHSLERKDPVTWNTMIGAFTHNGQPRLAVDLYARMGSGD--RNSVTFLGV 115

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A +AL D++ GR     +       ++ V  A++ +Y +C   + A   F+ M   N 
Sbjct: 116 LEACSALGDLDLGRTVDSSIAGSEWRDDVVVGTAVVGMYGRCRSIEEARQRFDSMPVKNV 175

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+++  A+      AL   R M      ++ V+   V+ V  + G           
Sbjct: 176 VSWNALVTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQLG----------- 224

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S ++ G+ +H    + G      L N+L+ MY K  +++ +  +F  +  + VVSW
Sbjct: 225 ----SLSL-GRSIHLRITRGGDGGGTRLENALISMYGKLENLEESLRVFEVMANKDVVSW 279

Query: 307 NVMIAGYGQKYQSTKAIELLQRMK-SCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
             MI  Y Q      A+EL +RM+      PD VT   +L AC   GD+ TG+E+     
Sbjct: 280 TAMITAYAQNGHERLALELYRRMELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVC 339

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         FDS+ S    ++NAML++Y+Q+ +  +A+ 
Sbjct: 340 SSDFDVDAALKTSLVGLYGKCHCLEDAKEVFDSISSRDRLAYNAMLAAYAQNGHPDDALN 399

Query: 391 LFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           L+R+M    GV+P  T+ A+ L +C A+  L +GK +H         +D  +A+ L+G Y
Sbjct: 400 LYRQMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFY 459

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            +    E AER+F ++P  D+  +++MI   S N  +  A   + +M Q  + P + +F 
Sbjct: 460 GEVGSLEEAERIFEQMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFI 519

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           +VLS+C    SS    +VH +I   G+  D  +G+AL+ MY K G++  +R+ F  M  +
Sbjct: 520 SVLSAC----SSNLATEVHTEIVHAGFEADGALGTALVCMYAKSGNLEESRRIFGAMKSR 575

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           ++V+W  MI  +A++G   EA  L++ M   G+     T  ++L + S SG VD     F
Sbjct: 576 DSVSWTAMISAFARHGC--EAKLLFQGMALDGIDAKGSTLTSMLVSYSQSG-VDAARGFF 632

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
            +MQ D G  P  +HY+C++D L R+G   EA+ L+D MP + D V W  LL +C+ H +
Sbjct: 633 VAMQGDFGTCPAAEHYSCLVDLLARSGRVGEAKELVDSMPLEPDFVPWMTLLGACKTHGD 692

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
           +  AK AA  +  +D  +   Y +L+ + S  G
Sbjct: 693 LEQAKSAARGVLEVDSHSPGAYLVLSTLCSGWG 725



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 162/649 (24%), Positives = 303/649 (46%), Gaps = 62/649 (9%)

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M     +P   TL S   A  +  ++  GR+ H   I   LD+   +AN+L+++Y KC  
Sbjct: 1   MEERRILPHRTTLVSAISACASSGNLARGRQLHAAAIARRLDRETLLANSLIAMYGKCHS 60

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              A  +F  +   + VT+  M+       +   A++++  M   +   +SV+   VL  
Sbjct: 61  LAEAERLFHSLERKDPVTWNTMIGAFTHNGQPRLAVDLYARM--GSGDRNSVTFLGVLEA 118

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           C+  G   + D+    D+    ++ G +         +  D+ +  +++ MY +   ++ 
Sbjct: 119 CSALG---DLDLGRTVDS----SIAGSE---------WRDDVVVGTAVVGMYGRCRSIEE 162

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A   F ++P ++VVSWN ++  Y +      A+  L+ M   G + + VT + ++    +
Sbjct: 163 ARQRFDSMPVKNVVSWNALVTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQ 222

Query: 351 SGDIKTGREM-----------------------------------FDSMPSPSVSSWNAM 375
            G +  GR +                                   F+ M +  V SW AM
Sbjct: 223 LGSLSLGRSIHLRITRGGDGGGTRLENALISMYGKLENLEESLRVFEVMANKDVVSWTAM 282

Query: 376 LSSYSQSENHKEAIKLFREMQF-RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           +++Y+Q+ + + A++L+R M+  + V+PDR T A +L +C+ +G L +GK+++A    + 
Sbjct: 283 ITAYAQNGHERLALELYRRMELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSD 342

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             +D  + + L+G+Y KC   E A+ VF  I   D + +N+M+A  + N    +A   ++
Sbjct: 343 FDVDAALKTSLVGLYGKCHCLEDAKEVFDSISSRDRLAYNAMLAAYAQNGHPDDALNLYR 402

Query: 495 QMRQNE-MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
           QM   E + PT  SFA  L +C  L     G+ +H +I+  G   D  + + L+  Y + 
Sbjct: 403 QMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEV 462

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +  A + F+ M  K+  +++ MI  Y+QNG    A+ +Y +M   G+KPD++ F+++L
Sbjct: 463 GSLEEAERIFEQMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVL 522

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
           +ACS +   +V  EI ++     G E      T ++    ++G+  E+  +   M  +D 
Sbjct: 523 SACSSNLATEVHTEIVHA-----GFEADGALGTALVCMYAKSGNLEESRRIFGAMKSRDS 577

Query: 674 PVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
            V W  ++S+   H            L  +D K S   S+L + YS  G
Sbjct: 578 -VSWTAMISAFARHGCEAKLLFQGMALDGIDAKGSTLTSMLVS-YSQSG 624



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 173/348 (49%), Gaps = 13/348 (3%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+ R + P RTTL   +S+CA+ G L  G+Q+HAA++      +  +A+ LI +Y KC  
Sbjct: 1   MEERRILPHRTTLVSAISACASSGNLARGRQLHAAAIARRLDRETLLANSLIAMYGKCHS 60

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              AER+FH +   D V WN+MI   + N     A   + +M   +      +F  VL +
Sbjct: 61  LAEAERLFHSLERKDPVTWNTMIGAFTHNGQPRLAVDLYARMGSGDR--NSVTFLGVLEA 118

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C+ L     GR V + I    + +D+ VG+A++ MY +C  I  ARQ FD M  KN V+W
Sbjct: 119 CSALGDLDLGRTVDSSIAGSEWRDDVVVGTAVVGMYGRCRSIEEARQRFDSMPVKNVVSW 178

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI-FNSMQ 633
           N ++  YA+NG+   A+R  ++M   G K + +TF+ ++   +  G + +G  I     +
Sbjct: 179 NALVTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRITR 238

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
              G    L++   +I   G+  +  E+  + + M  K D V W  ++++   + + RLA
Sbjct: 239 GGDGGGTRLEN--ALISMYGKLENLEESLRVFEVMANK-DVVSWTAMITAYAQNGHERLA 295

Query: 694 ---KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC 738
               R  E   R+ P +   Y+ +    S LG   DL   +E+ +  C
Sbjct: 296 LELYRRMELEKRVRP-DRVTYAAVLGACSGLG---DLSTGKEIYARVC 339



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 128/308 (41%), Gaps = 54/308 (17%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK LH  I   G+  D  L   L+  Y +  +   A+ +F++MP KD++S++A     
Sbjct: 431 VTGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSA----- 485

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +I A  +NG E +A+++Y +M  +G  P  +   
Sbjct: 486 --------------------------MIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFI 519

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV  A ++ L  E     H  ++  G + +  +  AL+ +YAK G  + +  +F  M   
Sbjct: 520 SVLSACSSNLATE----VHTEIVHAGFEADGALGTALVCMYAKSGNLEESRRIFGAMKSR 575

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++TAM+S  A+     EA  +F+ M    +     +L+S+L   ++ G       F 
Sbjct: 576 DSVSWTAMISAFARHG--CEAKLLFQGMALDGIDAKGSTLTSMLVSYSQSGVDAARGFFV 633

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSV 303
                F      +   C                L+D+ A++G +  A+ +  ++P E   
Sbjct: 634 AMQGDFGTCPAAEHYSC----------------LVDLLARSGRVGEAKELVDSMPLEPDF 677

Query: 304 VSWNVMIA 311
           V W  ++ 
Sbjct: 678 VPWMTLLG 685


>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 169/524 (32%), Positives = 297/524 (56%), Gaps = 26/524 (4%)

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
           KF+    G Q+H   I++GF +++H+ ++++DMYAK  ++ SA  +F+ +PER+ V+WN 
Sbjct: 81  KFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNEMPERNDVTWNS 140

Query: 309 MIAGY-----------GQKYQSTKAIELLQRMK-------------SCGFEPDEVTSINM 344
           +I GY              +  +  + +  +++               GF+ +      +
Sbjct: 141 LIFGYLNVMPTCAMRGVTSFSVSTCLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTAL 200

Query: 345 LVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
           +    +   +     +FD M   +V +W AM+++Y+Q+E   EA+ L REM   G+K + 
Sbjct: 201 IDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANY 260

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN-ELAERVFH 463
            T   +LSS +    ++  KQVH + ++     + Y+A+ L+ +YSKC  N E   ++  
Sbjct: 261 VTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISS 320

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            +   D + WN++IAG S   L  +A   F +MR   +    ++F ++L +     +  +
Sbjct: 321 GVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEE 380

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           GR++HA I K GY + ++V + L+ MY +CG I  +++ F +M   + V+WN ++ G A 
Sbjct: 381 GREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAH 440

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI-L 642
           +G+G+EAV L++ M  + +KP+  TF+A+L+ACSH G VD G+E F+ M+ D  +EP+ +
Sbjct: 441 HGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRV 500

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           +HY  ++D  GRAG+  EAE +I+ MP    P +++ LLS+C +H N  +A R+A +L  
Sbjct: 501 EHYASVVDIFGRAGYLSEAEAIINCMPMDPGPSVYKALLSACLVHGNREIAVRSARKLLE 560

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L P + A Y LL+N+ ++ G WDD   VR+LM +  + K+P YS
Sbjct: 561 LWPDDPATYILLSNMLATEGYWDDAADVRKLMCDRGVRKNPGYS 604



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 216/454 (47%), Gaps = 67/454 (14%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH----KDIYSWNAILSAQC 65
           L AH+LRNG F + +  N+++   +K  +      L   +       +++  +A++    
Sbjct: 56  LFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYA 115

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K  +++ A+++F+EMPERN V+WN+LI            L+V    +  G   T  ++++
Sbjct: 116 KCSEIQSAHEVFNEMPERNDVTWNSLIFGY---------LNVMPTCAMRGV--TSFSVST 164

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
                + L     G + HGL +K+G D N++V  AL+ +Y+KC     +  VF+ M + N
Sbjct: 165 CLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKN 224

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+TAM++  A+ ++  EA+ + R M+R  +  + V+ +S+L               + 
Sbjct: 225 VVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLS--------------SF 270

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK-NGDMDSAEVIFSNLPERSVV 304
           S  K+ +  + +QVHC  I+ G E +L+++ +L+ +Y+K   +++    I S +     +
Sbjct: 271 SGPKYMQ--YCKQVHCSIIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQI 328

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           SWN +IAGY        A++    M+    + D  T  ++L A      I+ GREM    
Sbjct: 329 SWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALI 388

Query: 361 -------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                          F  M    V SWNA+L+  +      EA+
Sbjct: 389 VKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAV 448

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +LF +M+   +KP+ TT   +LS+C+ +G ++ G
Sbjct: 449 ELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDKG 482



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 178/364 (48%), Gaps = 54/364 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H   L+ G  ++ F+   LI++YSKC                              
Sbjct: 178 GAQVHGLSLKLGFDNNVFVGTALIDMYSKC------------------------------ 207

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            D ++ ++++FD M ++NVV+W  +++A  +N   ++A+ +  +M   G    ++T  S+
Sbjct: 208 -DGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSL 266

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE--- 183
             + +    +++ ++ H  +I+ GL+ N+Y+A  L+++Y+KC    + +  F ++S    
Sbjct: 267 LSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAATLVTVYSKC---TNNLEDFNKISSGVQ 323

Query: 184 -PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             +++++ A+++G +      +AL+ F  M    + +D  + +S+LG             
Sbjct: 324 LSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIG---------- 373

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                  F     G+++H L +K G+ + +++ N L+ MYA+ G +D ++ +F  + +  
Sbjct: 374 ------AFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHD 427

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           VVSWN ++ G        +A+EL ++M+    +P+  T + +L AC   G +  G E FD
Sbjct: 428 VVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDKGLEYFD 487

Query: 363 SMPS 366
            M S
Sbjct: 488 FMRS 491



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 11/227 (4%)

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           LF  +   G   +   +  ++S CA     + G Q+H+  ++     + ++ S ++ +Y+
Sbjct: 56  LFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYA 115

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   + A  VF+ +PE + V WNS+I G  LN +   A      MR      T FS +T
Sbjct: 116 KCSEIQSAHEVFNEMPERNDVTWNSLIFGY-LNVMPTCA------MRG----VTSFSVST 164

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
            L  C++L     G QVH    K G+ N++FVG+ALI+MY KC  +  + + FD M  KN
Sbjct: 165 CLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKN 224

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            VTW  M+  YAQN   DEA+ L ++M+  G+K + +T+ ++L++ S
Sbjct: 225 VVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFS 271



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 50/295 (16%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K +H  I+R GL  + ++   L+ +YSKC N              ++  +N I S    S
Sbjct: 280 KQVHCSIIRCGLECNLYIAATLVTVYSKCTN--------------NLEDFNKISSGVQLS 325

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D                 +SWN +I+     GL E AL  + +M +        T  S+ 
Sbjct: 326 DQ----------------ISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLL 369

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
            A  A L +E GR  H L++K G   ++YV N L+S+YA+CG    +  VF  M + + V
Sbjct: 370 GAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVV 429

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC---GVESDVFA 244
           ++ A+++G A      EA+E+F  M +  +  +S +  +VL  C+  G    G+E   F 
Sbjct: 430 SWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDKGLEYFDFM 489

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           +SD                I L      H + S++D++ + G +  AE I + +P
Sbjct: 490 RSD----------------ISLEPLRVEHYA-SVVDIFGRAGYLSEAEAIINCMP 527



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 14/229 (6%)

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
            F  + +N  +   +    V+S CAK +S   G Q+H+ I + G+ +++ + SA+++MY 
Sbjct: 56  LFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYA 115

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KC +I  A + F+ M  +N VTWN +I GY         + +       GV    ++   
Sbjct: 116 KCSEIQSAHEVFNEMPERNDVTWNSLIFGY---------LNVMPTCAMRGVTSFSVS--T 164

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
            L  CS   + + G ++ + + L  G +  +   T +ID   +     ++  + D M  K
Sbjct: 165 CLVVCSQLEVRNFGAQV-HGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDK 223

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK-NSAPYSLLANIYS 719
            + V W  ++++   +     A     E+ RL  K N   Y+ L + +S
Sbjct: 224 -NVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFS 271


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 197/626 (31%), Positives = 320/626 (51%), Gaps = 52/626 (8%)

Query: 157 VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
           V + L  LY  C     A  +F+E+  P+ + +  ++   A       A++++  M+   
Sbjct: 45  VLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLG 104

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  +  +   VL  C        S + A  D        G ++H      G E+D+ +  
Sbjct: 105 VRPNKYTYPFVLKAC--------SGLLAIED--------GVEIHSHAKMFGLESDVFVCT 148

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D YAK G +  A+ +FS++  R VV+WN MIAG         A++L+ +M+  G  P
Sbjct: 149 ALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICP 208

Query: 337 DEVTSINMLVA----------------CVR-SGD----IKTG--------------REMF 361
           +  T + +L                  CVR S D    + TG              R++F
Sbjct: 209 NSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIF 268

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGIL 420
           D M   +  SW+AM+  Y  S+  KEA++LF +M  +  + P   TL  +L +CA +  L
Sbjct: 269 DVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDL 328

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
             G+++H   +K  S +D  + + L+ +Y+KC   + A R F  +   D V ++++++G 
Sbjct: 329 SRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGC 388

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
             N     A   F+ M+ + + P   +   VL +C+ L++   G   H  +   G+  D 
Sbjct: 389 VQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDT 448

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            + +ALI+MY KCG I  AR+ F+ M   + V+WN MI GY  +G G EA+ L+ D++A 
Sbjct: 449 LICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLAL 508

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G+KPDDITF+ +L++CSHSGLV  G   F++M  D  + P ++H  CM+D LGRAG   E
Sbjct: 509 GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDE 568

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           A   I  MP + D  IW  LLS+CR+H N+ L +  ++++  L P+++  + LL+NIYS+
Sbjct: 569 AHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSA 628

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
            GRWDD   +R    +  + K P  S
Sbjct: 629 AGRWDDAAHIRITQKDWGLKKIPGCS 654



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 174/668 (26%), Positives = 285/668 (42%), Gaps = 116/668 (17%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+    K +H H L+N    D+ + ++L  LY  CN                        
Sbjct: 22  KSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQ----------------------- 58

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   +  A +LFDE+P  +V+ WN +I A   NG  + A+ +Y+ M + G  P   
Sbjct: 59  --------VVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKY 110

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T   V KA + LL +E G   H      GL+ +++V  AL+  YAKCG    A  +F  M
Sbjct: 111 TYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSM 170

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S  + V + AM++G +      +A+++   M  + +  +S   S+++GV    G   E+ 
Sbjct: 171 SHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNS---STIVGVLPTVG---EAK 224

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                        HG+ +H   ++  F+  + +   LLDMYAK   +  A  IF  +  R
Sbjct: 225 ALG----------HGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR 274

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           + VSW+ MI GY       +A+EL  +M      +P  VT  ++L AC +  D+  GR++
Sbjct: 275 NEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKL 334

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              FD M      S++A++S   Q+ N 
Sbjct: 335 HCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNA 394

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
             A+ +FR MQ  G+ PD TT+  +L +C+ +  L+ G   H   +      D  + + L
Sbjct: 395 AVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNAL 454

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YSKC +   A  VF+R+   DIV WN+MI G  ++ L +EA   F  +    + P  
Sbjct: 455 IDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDD 514

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +F  +LSSC+      +GR     + +D      F     +E +C C            
Sbjct: 515 ITFICLLSSCSHSGLVMEGRLWFDAMSRD------FSIVPRME-HCIC------------ 555

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
                      M+    + G  DEA    ++M     +PD   + A+L+AC     +++G
Sbjct: 556 -----------MVDILGRAGLIDEAHHFIRNM---PFEPDVRIWSALLSACRIHKNIELG 601

Query: 626 VEIFNSMQ 633
            E+   +Q
Sbjct: 602 EEVSKKIQ 609



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 148/327 (45%), Gaps = 9/327 (2%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L +C     L   K++H   LK  S+ D+ V   L  +Y  C +  LA R+F  IP   
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           ++ WN +I   + N     A   +  M    + P ++++  VL +C+ L +   G ++H+
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
             +  G  +D+FV +AL++ Y KCG +  A++ F  M  ++ V WN MI G +  G  D+
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN---SMQLDHGVEPILDHYT 646
           AV+L   M   G+ P+  T V +L     +  +  G  +         D+GV       T
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV----GT 249

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK 706
            ++D   +      A  + D M  +++ V W  ++        ++ A    +++   D  
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNE-VSWSAMIGGYVASDCMKEALELFDQMILKDAM 308

Query: 707 NSAPYSLLANIYSSLGRWDDLRAVREL 733
           +  P + L ++  +  +  DL   R+L
Sbjct: 309 DPTPVT-LGSVLRACAKLTDLSRGRKL 334



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 5/211 (2%)

Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
           +  + ++  +L +C +  S  + +++H    K+    D  V   L  +Y  C  +  AR+
Sbjct: 5   FEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARR 64

Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
            FD +   + + WN++I  YA NG  D A+ LY  M+  GV+P+  T+  +L ACS    
Sbjct: 65  LFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLA 124

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           ++ GVEI +  ++  G+E  +   T ++D   + G   EA+ L   M  + D V W  ++
Sbjct: 125 IEDGVEIHSHAKM-FGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMI 182

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYS 712
           + C L+    L   A + + ++  +   P S
Sbjct: 183 AGCSLYG---LCDDAVQLIMQMQEEGICPNS 210


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 198/656 (30%), Positives = 334/656 (50%), Gaps = 67/656 (10%)

Query: 139 GRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
           GR+ H L +K  L   N+ + N ++S+YA C     A   F+ + + N  ++T +++  A
Sbjct: 62  GRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFA 121

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
            + +  E L     M +  V  D+V+  + LG C               D +  R+  G 
Sbjct: 122 ISGQSKETLRALERMRQDGVRPDAVTFITALGSCG--------------DPESLRD--GI 165

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE-RSVVSWNVMIAGY--- 313
           ++H + +    E D  +SN+LL+MY K G +  A+ +F+ +   R+V+SW++M   +   
Sbjct: 166 RIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALH 225

Query: 314 ----------------GQKYQSTKAIELL------------QRMKSC----GFEPDEVTS 341
                           G K   +  + +L            + + SC    GFE + + +
Sbjct: 226 GNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVA 285

Query: 342 INMLVACVRSGDIKTGREMFDSMPSP--SVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
             ++    R G ++  R++FD+M      V SWN MLS+Y  ++  K+AI+L++ MQ R 
Sbjct: 286 NAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRA 345

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
              D+ T   +LS+C++   +  G+ +H   +      +  V + L+ +Y+KC  +  A 
Sbjct: 346 ---DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEAR 402

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-------MYPTQFSFATVL 512
            VF ++ +  I+ W ++I+      L  EA   F+QM + E       + P   +F T+L
Sbjct: 403 AVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTIL 462

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           ++CA +S+  QG+ V  Q    G  +D  VG+A++ +Y KCG+I   R+ FD +  +  V
Sbjct: 463 NACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDV 522

Query: 573 T-WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
             WN MI  YAQ G   EA++L+  M   GV+PD  +FV+IL ACSH+GL D G   F S
Sbjct: 523 QLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTS 582

Query: 632 MQLDH-GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
           M  ++  V   + H+ C+ D LGR G   EAE  ++++P K D V W  LL++CR H ++
Sbjct: 583 MTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDL 642

Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + AK  A +L RL+P+ +  Y  L+NIY+ L +W  +  VR+ M+E  + K+   S
Sbjct: 643 KRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVS 698



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 249/570 (43%), Gaps = 68/570 (11%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N I+S     D    A   FD + +RN+ SW  L++A   +G  ++ L    +M  +G  
Sbjct: 83  NHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVR 142

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  +T  +   +      +  G R H +V+   L+ +  V+NALL++Y KCG   HA  V
Sbjct: 143 PDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRV 202

Query: 178 FEEMSEPNEVTFTAMMSGL-AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           F +M     V   ++M+G  A    V EAL  FR M+   +     ++ ++L  C+    
Sbjct: 203 FAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACS---- 258

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
              S    Q          G+ +H      GFE++L ++N+++ MY + G ++ A  +F 
Sbjct: 259 ---SPALVQD---------GRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFD 306

Query: 297 NLPE--RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
            + E  R VVSWN+M++ Y    +   AI+L QRM+      D+VT +++L AC  + D+
Sbjct: 307 AMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ---LRADKVTYVSLLSACSSAEDV 363

Query: 355 KTG-----------------------------------REMFDSMPSPSVSSWNAMLSSY 379
             G                                   R +FD M   S+ SW  ++S+Y
Sbjct: 364 GLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAY 423

Query: 380 SQSENHKEAIKLFREM-------QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
            +     EA  LF++M         + VKPD      IL++CA +  LE GK V   +  
Sbjct: 424 VRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAAS 483

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRI-PELDIVCWNSMIAGLSLNSLDIEAFM 491
                D  V + ++ +Y KC   E   R+F  +    D+  WN+MIA  +      EA  
Sbjct: 484 CGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALK 543

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI--EKDGYVNDIFVGSALIEM 549
            F +M    + P  FSF ++L +C+      QG+     +  E       I     + ++
Sbjct: 544 LFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADL 603

Query: 550 YCKCGDIYGARQFFDMMHGK-NTVTWNEMI 578
             + G +  A +F + +  K + V W  ++
Sbjct: 604 LGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 633



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/545 (23%), Positives = 250/545 (45%), Gaps = 56/545 (10%)

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN---VHGQQVHCLTIKLGF-EADLH 273
           S+D   ++S +    ++    E+  +A+   + +R      G+++H L +K      +L 
Sbjct: 21  SLDRSDIASAVLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLI 80

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           L N ++ MYA       A+  F  L +R++ SW  ++A +    QS + +  L+RM+  G
Sbjct: 81  LGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDG 140

Query: 334 FEPDEVTSINMLVAC-----------------------------------VRSGDIKTGR 358
             PD VT I  L +C                                    + G +   +
Sbjct: 141 VRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAK 200

Query: 359 EMFDSMP-SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
            +F  M  + +V SW+ M  +++   N  EA++ FR M   G+K  ++ +  ILS+C++ 
Sbjct: 201 RVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSP 260

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL--DIVCWNS 475
            +++ G+ +H+    +    +  VA+ ++ +Y +C   E A +VF  + E   D+V WN 
Sbjct: 261 ALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNI 320

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           M++    N    +A   +++M   ++   + ++ ++LS+C+       GR +H QI  D 
Sbjct: 321 MLSAYVHNDRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDE 377

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
              ++ VG+AL+ MY KCG    AR  FD M  ++ ++W  +I  Y +     EA  L++
Sbjct: 378 LEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQ 437

Query: 596 DMI-------ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
            M+       +  VKPD + FV IL AC+    ++ G ++ +      G+       T +
Sbjct: 438 QMLELEKNGSSQRVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAV 496

Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS 708
           ++  G+ G   E   + D +  + D  +W  +++   ++A    +  A +  +R++ +  
Sbjct: 497 VNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIA---VYAQFGQSHEALKLFWRMEMEGV 553

Query: 709 APYSL 713
            P S 
Sbjct: 554 RPDSF 558



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 201/414 (48%), Gaps = 41/414 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPE--RNVVSWNNLISALVRNGLEEKALSVYNKMSNEG 115
           NA+++   +   +E A K+FD M E  R+VVSWN ++SA V N   + A+ +Y +M    
Sbjct: 286 NAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ--- 342

Query: 116 FVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
                +T  S+  A ++  DV  GR  H  ++   L+KN+ V NAL+S+YAKCG    A 
Sbjct: 343 LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEAR 402

Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR-------KAVSIDSVSLSSVL 228
            VF++M + + +++T ++S   +   V EA  +F+ M+        + V  D+++  ++L
Sbjct: 403 AVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTIL 462

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
             CA        DV A    K    V  Q   C     G  +D  +  +++++Y K G++
Sbjct: 463 NACA--------DVSALEQGKM---VSEQAASC-----GLSSDKAVGTAVVNLYGKCGEI 506

Query: 289 DSAEVIFSNLPERSVVS-WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           +    IF  +  R  V  WN MIA Y Q  QS +A++L  RM+  G  PD  + +++L+A
Sbjct: 507 EEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLA 566

Query: 348 CVRSGDIKTGREMFDSMPSP------SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           C  +G    G+  F SM +       ++  +  +     +    KEA +   ++    VK
Sbjct: 567 CSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLP---VK 623

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASH-IDNYVASGLIGIYSKCQR 454
           PD      +L++C     L+  K+V    L+        YVA  L  IY++ Q+
Sbjct: 624 PDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVA--LSNIYAELQK 675



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 173/437 (39%), Gaps = 87/437 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G++LH  I+ + L  +  + N L+ +Y+KC +   A+ +FDKM  + I SW  I+SA  +
Sbjct: 366 GRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVR 425

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +  A  LF +M E            L +NG            S++   P  +   ++
Sbjct: 426 RRLVAEACHLFQQMLE------------LEKNG------------SSQRVKPDALAFVTI 461

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM-SEPN 185
             A   +  +E G+         GL  +  V  A+++LY KCG  +    +F+ + S P+
Sbjct: 462 LNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPD 521

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
              + AM++  A+  +  EAL++F  M  + V  DS S  S+L  C+  G   +   +  
Sbjct: 522 VQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFT 581

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S     RNV     H      G  ADL           + G +  AE     LP      
Sbjct: 582 SMTTEYRNVTRTIQH-----FGCVADL---------LGRGGRLKEAEEFLEKLP------ 621

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM- 364
                                        +PD V   ++L AC    D+K  +E+ + + 
Sbjct: 622 ----------------------------VKPDAVAWTSLLAACRNHRDLKRAKEVANKLL 653

Query: 365 -PSPSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
              P  ++    LS+ Y++ +      K+ + M  +GVK +R            +  +E 
Sbjct: 654 RLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKER-----------GVSTIEI 702

Query: 423 GKQVHAASLKTASHIDN 439
           GK +H  +    +H  N
Sbjct: 703 GKYMHDFATGDDAHPRN 719


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 189/546 (34%), Positives = 286/546 (52%), Gaps = 42/546 (7%)

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           VES V  Q  ++  R  H Q +  L   L       + N L++MY+K    +SA+++ S 
Sbjct: 13  VESAVSTQC-SRLGRAAHAQIIKTLDNPL----PSFIYNHLVNMYSKLDRPNSAQLLLSL 67

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI--------------- 342
            P RSVV+W  +IAG  Q  + T A+     M+    +P++ T                 
Sbjct: 68  TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG 127

Query: 343 --------------NMLVACV------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                         ++ V C       ++G  +  R+MFD MP  ++++WNA LS+    
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLE 187

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
             + +A+  F E +  G +P+  T    L++CA    L  G+Q+H   L++    D  VA
Sbjct: 188 GRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVA 247

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           +GLI  Y KC +   +E +F  I + + V W SMI     N  + +A + F + R+  + 
Sbjct: 248 NGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIE 307

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           PT F  ++VLS+CA LS    G+ VH    K   V +IFVGSAL++MY KCG I  A + 
Sbjct: 308 PTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERA 367

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG--VKPDDITFVAILTACSHSG 620
           FD M  +N VTWN MI GYA  G  D AV L+ +M      V P+ +TFV +L+ACS +G
Sbjct: 368 FDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAG 427

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
            V+VG+EIF SM+  +G+EP  +HY C++D LGRAG   +A   I +MP +    +W  L
Sbjct: 428 SVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGAL 487

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           L + ++     L K AA+ LF LDP +S  + LL+N++++ GRW++   VR+ M +  I 
Sbjct: 488 LGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIK 547

Query: 741 KDPAYS 746
           K    S
Sbjct: 548 KGAGCS 553



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 199/431 (46%), Gaps = 59/431 (13%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           ++ + GK +HA  ++ G   D F+     ++YSK   T  A+                  
Sbjct: 122 RSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEAR------------------ 163

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                        K+FDEMPERN+ +WN  +S  V  G  + AL+ + +  +EG+ P  I
Sbjct: 164 -------------KMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLI 210

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  +   A      +  GR+ HG V++ G + ++ VAN L+  Y KC     +  +F  +
Sbjct: 211 TFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGI 270

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S+PN+V++ +M+    + D   +A  +F    ++ +      +SSVL  CA         
Sbjct: 271 SKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACA--------- 321

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                    S    G+ VH L +K     ++ + ++L+DMY K G ++ AE  F  +PER
Sbjct: 322 -------GLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPER 374

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG---FEPDEVTSINMLVACVRSGDIKTGR 358
           ++V+WN MI GY  + Q+  A+ L   M +CG     P+ VT + +L AC R+G +  G 
Sbjct: 375 NLVTWNAMIGGYAHQGQADMAVTLFDEM-TCGSHRVAPNYVTFVCVLSACSRAGSVNVGM 433

Query: 359 EMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           E+F+SM       P    +  ++    ++   ++A +  ++M  R   P  +    +L +
Sbjct: 434 EIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIR---PTVSVWGALLGA 490

Query: 414 CAAMGILESGK 424
               G  E GK
Sbjct: 491 SKMFGKSELGK 501



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 193/460 (41%), Gaps = 89/460 (19%)

Query: 7   GKLLHAHILRNGLFDD---TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           G+  HA I++    D+   +F+ N L+ +YSK +  +SAQ L    P+            
Sbjct: 25  GRAAHAQIIKT--LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPN------------ 70

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                              R+VV+W  LI+  V+NG    AL  ++ M  +   P   T 
Sbjct: 71  -------------------RSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTF 111

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
              FKAS +L     G++ H L +K G   +++V  +   +Y+K G T+ A  +F+EM E
Sbjct: 112 PCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPE 171

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N  T+ A +S      R  +AL  F     +    + ++  + L  CA           
Sbjct: 172 RNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGA--------- 222

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                  S    G+Q+H   ++ GFEAD+ ++N L+D Y K   +  +E+IFS + + + 
Sbjct: 223 -------SYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPND 275

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------- 349
           VSW  MI  Y Q  +  KA  +  R +  G EP +    ++L AC               
Sbjct: 276 VSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTL 335

Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                                + G I+     FD MP  ++ +WNAM+  Y+       A
Sbjct: 336 AVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMA 395

Query: 389 IKLFREMQFRG--VKPDRTTLAIILSSCAAMGILESGKQV 426
           + LF EM      V P+  T   +LS+C+  G +  G ++
Sbjct: 396 VTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 435


>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 191/676 (28%), Positives = 329/676 (48%), Gaps = 83/676 (12%)

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
           + + L S  K+ ++L  +  GR+ H L+ K+GL  N ++ N+L+++YAKCG  K+A  +F
Sbjct: 52  SELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLF 111

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREG-- 235
           +  +  + V+   M+SG  +  ++  A ++F +M  K  VS  ++ +  V     RE   
Sbjct: 112 DGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALE 171

Query: 236 -------CGVESDVFAQSD-----NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
                  CGV  +     +     +     ++ + VH L +K+     + +S +L+  Y 
Sbjct: 172 VFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYC 231

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
               +  A  +F  +PER++V+WNVM+ GY                              
Sbjct: 232 LCSGVREARRLFDEMPERNLVTWNVMLNGYA----------------------------- 262

Query: 344 MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                 ++G +   RE+FD +    V SW  M+  Y Q    +EA++++R M   G  P+
Sbjct: 263 ------KTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPN 316

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA----- 458
              +  ++S+C     +  G Q+H   +K      N++ + +I  Y+ C   +LA     
Sbjct: 317 EVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFE 376

Query: 459 --------------------------ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                                      + F ++   D+  W++MI+G + +     A   
Sbjct: 377 VGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALEL 436

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           F +M    + P + +  +V S+ A L +  +G+  H  +  +    +  + +ALI+MY K
Sbjct: 437 FHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAK 496

Query: 553 CGDIYGARQFFDMMHGK--NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
           CG I  A QFF+ +  +  +   WN +I G A +G+    + ++ DM    +KP+ ITF+
Sbjct: 497 CGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFI 556

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
            +L+AC H+GLV+ G  IF +M+  + VEP + HY CMID LGRAG   EAE +I  MP 
Sbjct: 557 GVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPM 616

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
           + D VIW  LL++CR H NV + +RAAE L RL P +     LL+NIY++ G+W+++  V
Sbjct: 617 EADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFV 676

Query: 731 RELMSENCIVKDPAYS 746
           R +M    + ++P YS
Sbjct: 677 RSVMQGQTMDREPGYS 692



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 156/558 (27%), Positives = 261/558 (46%), Gaps = 87/558 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+ I + GL  +TF+ N LI +Y+KC +  +AQ LFD     D  S N ++S   +
Sbjct: 72  GRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVR 131

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +  ++ A KLFD MP +  VS+  +I   V+NG   +AL V+  M + G VP  +TL +V
Sbjct: 132 NGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNV 191

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + L +V + R  HGLV+K+ +   + V+  L+  Y  C   + A  +F+EM E N 
Sbjct: 192 ISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNL 251

Query: 187 VTFTAMMSGLAKT-------------------------------DRVVEALEMFRLMIRK 215
           VT+  M++G AKT                                R+ EALE++R M++ 
Sbjct: 252 VTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQT 311

Query: 216 AVSIDSVSLSSVLGVCAR-----EGCGVESDV---------FAQSDNKFSRNVHG-QQVH 260
               + V + +++  C R     +G  +   V         F Q+   +     G   + 
Sbjct: 312 GHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLA 371

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
           CL  ++G +  L   N+L   + KNG MD A   F  +  R V SW+ MI+GY Q     
Sbjct: 372 CLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPK 431

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-------------- 366
            A+EL  +M + G +P+EVT +++  A    G ++ G+   + M S              
Sbjct: 432 MALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALI 491

Query: 367 -----------------------PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                                   SVS WNA++   +   +    +++F +MQ   +KP+
Sbjct: 492 DMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPN 551

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQRNELAERV 461
             T   +LS+C   G++ESGK++   ++K+A +++  +     +I I  +    E AE +
Sbjct: 552 PITFIGVLSACCHAGLVESGKRIF-KTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEM 610

Query: 462 FHRIP-ELDIVCWNSMIA 478
              +P E DIV W +++A
Sbjct: 611 IRSMPMEADIVIWGTLLA 628



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 152/333 (45%), Gaps = 21/333 (6%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V G  LH  +++ G     F+   +I  Y+ C     A   F+      + SWNA+ +
Sbjct: 332 AIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTA 391

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              K+  ++ A K FD+M  R+V SW+ +IS   ++   + AL +++KM   G  P  +T
Sbjct: 392 GFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVT 451

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM- 181
           + SVF A   L  ++ G+  H  +    +  N  +  AL+ +YAKCG    A+  F ++ 
Sbjct: 452 MVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIR 511

Query: 182 SEPNEVT-FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
            E + V+ + A++ GLA        LE+F  M R  +  + ++   VL  C   G  VES
Sbjct: 512 DEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGL-VES 570

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP- 299
                   K + NV              E D+     ++D+  + G ++ AE +  ++P 
Sbjct: 571 GKRIFKTMKSAYNV--------------EPDIKHYGCMIDILGRAGLLEEAEEMIRSMPM 616

Query: 300 ERSVVSWNVMIAG---YGQKYQSTKAIELLQRM 329
           E  +V W  ++A    +G      +A E L R+
Sbjct: 617 EADIVIWGTLLAACRTHGNVNIGERAAENLARL 649



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 124/276 (44%), Gaps = 60/276 (21%)

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
           +F         + ++ +  + L SC+ LS   QGRQ+H+ I K G   + F+ ++LI MY
Sbjct: 39  IFTNARNHQNHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMY 98

Query: 551 CKCGDIY-------------------------------GARQFFDMMHGKNTVTWNEMIH 579
            KCGDI                                 AR+ FD+M  K  V++  MI 
Sbjct: 99  AKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIM 158

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG-- 637
           G+ QNG+  EA+ ++KDM + GV P+D+T V +++ACSH G      E+ N  ++ HG  
Sbjct: 159 GFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLG------EVLNC-RMVHGLV 211

Query: 638 ----------VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
                     V   L H  C+  C G      EA  L DEMP + + V W V+L+    +
Sbjct: 212 VKMFVVGLVIVSTNLMHAYCL--CSG----VREARRLFDEMP-ERNLVTWNVMLNG---Y 261

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGR 723
           A   L   A E    +  K+   +  + + Y   GR
Sbjct: 262 AKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGR 297


>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 710

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 195/693 (28%), Positives = 339/693 (48%), Gaps = 91/693 (13%)

Query: 106 SVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
           S+ N  + +      + L S  K  +  L +  G++ H LV K GL  N ++ N+L+++Y
Sbjct: 52  SLLNPKTGQRHFNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMY 111

Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSL 224
            KCG    A  +F+     + V++  M+SG  K+ ++  A E+F  M ++  VS  ++  
Sbjct: 112 GKCGLLVDAKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTM-- 169

Query: 225 SSVLGVCAREGCGVESDVFAQSDN------------------KFSRNVHGQQVHCLTIKL 266
             ++G    E      ++F Q  N                   F      + +H L IK+
Sbjct: 170 --IMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKM 227

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
            FE  + +S +LL MY     +  A  +F  +PE+++VSWNVM+ GY             
Sbjct: 228 LFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYS------------ 275

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                                  ++G + + R +F+ +P+  + +W  ++  Y + E   
Sbjct: 276 -----------------------KAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERIN 312

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
           EA+ ++R M   G +P+   +  ++S C     +  G+Q+ +A +K      +++ S +I
Sbjct: 313 EALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTII 372

Query: 447 GIYSKCQ----------------------------RNELAER---VFHRIPELDIVCWNS 475
            +Y+ C                             RN + +R   +F+ +PE D+  W++
Sbjct: 373 HLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWST 432

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           MI+G + N     A   F +M  + + P + +  +VLS+ A   +  +GR  H  +  + 
Sbjct: 433 MISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNS 492

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQ-FFDMMHGKNTVT-WNEMIHGYAQNGYGDEAVRL 593
                 + +A+I+MY KCG I  A + F+++    +TV+ WN +I G A +G+ + ++++
Sbjct: 493 ITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKI 552

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           + D+    +K + ITF+ +LTAC H GLV+ G   F SM+ +H ++P + HY CM+D LG
Sbjct: 553 FSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLG 612

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           RAG   EAE +I  MP K D VIW  LL++CR H NV + +RAAE L RL+P + A   L
Sbjct: 613 RAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVL 672

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L+N+Y+  G+W+D   VR  M  + + + P YS
Sbjct: 673 LSNMYADAGKWEDAFLVRRAMQSHRMQRLPGYS 705



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 264/559 (47%), Gaps = 87/559 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  + ++GL  + F+ N LI +Y KC     A+ +FD  P  D  S+N ++S   K
Sbjct: 85  GKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMISGYVK 144

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S  L++A +LFDEMP +  VS+  +I    +N    +A+ ++ +M N G VP  +T+A++
Sbjct: 145 SGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATL 204

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A +    +   R  HGLVIK+  ++ + V+  LL +Y  C     A  +F+EM E N 
Sbjct: 205 VSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNI 264

Query: 187 VTFTAMMSGLAK-------------------------------TDRVVEALEMFRLMIRK 215
           V++  M++G +K                                +R+ EAL M+R MI  
Sbjct: 265 VSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISA 324

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN----VHGQQVH----------- 260
               + V +  ++  C R     E      +  K   +    +    +H           
Sbjct: 325 GWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEA 384

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
           CL  ++G + ++   N+L+  Y +N  +D A  +F+ +PER V SW+ MI+GY Q  Q  
Sbjct: 385 CLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPN 444

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------------------- 358
            A+EL  +M + G +P+EVT +++L A   SG +K GR                      
Sbjct: 445 LALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAII 504

Query: 359 -------------EMFDSM--PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                        E+F  +   + +VS WNA++   +   +   ++K+F +++ R +K +
Sbjct: 505 DMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLN 564

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQRNELAERV 461
             T   +L++C  +G++ESGK+ H  S+K+   ID  +     ++ +  +  R E AE +
Sbjct: 565 AITFIGVLTACCHVGLVESGKR-HFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEM 623

Query: 462 FHRIP-ELDIVCWNSMIAG 479
              +P + D+V W +++A 
Sbjct: 624 IRSMPMKADVVIWGTLLAA 642



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 217/458 (47%), Gaps = 57/458 (12%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           A ++LH  +++    +   +   L+ +Y  C++   A+ LFD+MP K+I SWN +L+   
Sbjct: 216 ACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYS 275

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K+  ++ A  +F+ +P +++V+W  +I   VR     +AL +Y  M + G+ P  + +  
Sbjct: 276 KAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVD 335

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------------- 169
           +       + +  G++    V+K+G D   ++ + ++ LYA CG                
Sbjct: 336 LISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKEN 395

Query: 170 ---WTK------------HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
              W               A+ +F EM E +  +++ M+SG  + ++   ALE+F  M+ 
Sbjct: 396 VASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVA 455

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
             +  + V++ SVL   A  G   E            R  H + VH  +I +   +D +L
Sbjct: 456 SGIKPNEVTMVSVLSAIATSGTLKE-----------GRWAH-EYVHNNSITV---SD-NL 499

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPER--SVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
           S +++DMYAK G +++A  +F  + E+  +V  WN +I G      +  ++++   ++  
Sbjct: 500 SAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERR 559

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKE 387
             + + +T I +L AC   G +++G+  F SM S     P +  +  M+    ++   +E
Sbjct: 560 HIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEE 619

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           A ++ R M    +K D      +L++C   G ++ G++
Sbjct: 620 AEEMIRSMP---MKADVVIWGTLLAACRTHGNVDVGER 654



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 163/336 (48%), Gaps = 25/336 (7%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A   G+ L + +++ G     F+ + +I LY+ C   + A   F     +++ SWNA+++
Sbjct: 345 AMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIA 404

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              ++  ++ A +LF+EMPER+V SW+ +IS   +N     AL +++KM   G  P  +T
Sbjct: 405 GYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVT 464

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + SV  A      ++ GR  H  V    +  +  ++ A++ +YAKCG   +A+ VF E+ 
Sbjct: 465 MVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIR 524

Query: 183 EPNEVT--FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           E       + A++ GLA       +L++F  + R+ + +++++   VL  C   G     
Sbjct: 525 EKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGL---- 580

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKL--GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                        V   + H +++K     + D+     ++D+  + G ++ AE +  ++
Sbjct: 581 -------------VESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSM 627

Query: 299 PERS-VVSWNVMIAG---YGQKYQSTKAIELLQRMK 330
           P ++ VV W  ++A    +G      +A E L R++
Sbjct: 628 PMKADVVIWGTLLAACRTHGNVDVGERAAENLARLE 663


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 198/630 (31%), Positives = 324/630 (51%), Gaps = 63/630 (10%)

Query: 161 LLSLYAKCGWTKHAVPVFEEMSE--PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           L+ LY  C   K A  VF++M     N V +  ++   A      EA++++  M+   ++
Sbjct: 57  LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            +  +   VL  C+                       G+++HC   +L  E+++++S +L
Sbjct: 117 PNRFTFPFVLKACS----------------ALKEASEGREIHCDIKRLRLESNVYVSTAL 160

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI-ELLQRMKSCGFEPD 337
           +D YAK G +D A+ +F  + +R VV+WN MI+G+     S   +  LL +M++    P+
Sbjct: 161 VDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQN-DVSPN 219

Query: 338 EVTSINMLVA----------------CVRSG---DIKTG----------------REMFD 362
             T + +L A                CVR G   D+  G                R +FD
Sbjct: 220 SSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFD 279

Query: 363 SMP-SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD-----RTTLAIILSSCAA 416
            M    +  +W+AM+ +Y   +  +EA++LF   Q   +K D       TLA ++  CA 
Sbjct: 280 MMGIVKNEVTWSAMVGAYVVCDFMREALELF--CQLLMLKDDVIVLSAVTLATVIRVCAN 337

Query: 417 MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
           +  L +G  +H  ++K+   +D  V + L+ +Y+KC     A R F+ +   D V + ++
Sbjct: 338 LTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAI 397

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
           I+G   N    E    F +M+ + + P + + A+VL +CA L+    G   H      G+
Sbjct: 398 ISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGF 457

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
             D  + +ALI+MY KCG I  AR+ FD MH +  V+WN MI  Y  +G G EA+ L+ +
Sbjct: 458 TADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDN 517

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M + G+KPDD+TF+ +++ACSHSGLV  G   FN+M  D G+ P ++HY CM+D L RAG
Sbjct: 518 MQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAG 577

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
            F E    I++MP + D  +W  LLS+CR++ NV L +  ++++ +L P+++  + LL+N
Sbjct: 578 LFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSN 637

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +YS++GRWDD   VR    E    K P  S
Sbjct: 638 MYSAVGRWDDAAQVRFTQKEQGFEKSPGCS 667



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 164/654 (25%), Positives = 288/654 (44%), Gaps = 112/654 (17%)

Query: 2   KAHVAGKLLHAHILR-------NGL--FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK 52
           K+   GKL+H H+L+         L  FD  F   +L++LY  C+    A+H+FDK    
Sbjct: 23  KSLFRGKLIHQHLLKCLHRTHETNLTNFDVPF--EKLVDLYIACSELKIARHVFDK---- 76

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPER--NVVSWNNLISALVRNGLEEKALSVYNK 110
                                      MP R  NVV WN LI A   NG  E+A+ +Y K
Sbjct: 77  ---------------------------MPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYK 109

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M   G  P   T   V KA +AL +   GR  H  + ++ L+ N+YV+ AL+  YAKCG 
Sbjct: 110 MLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGC 169

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              A  VF++M + + V + +M+SG +  +   + +    + ++  VS +S ++  VL  
Sbjct: 170 LDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPA 229

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
            A                + +   HG+++H   ++ GF  D+ +   +LD+Y K   +D 
Sbjct: 230 VA----------------QVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDY 273

Query: 291 AEVIFSNLP-ERSVVSWNVMIAGYGQKYQSTKAIELLQRM-------------------K 330
           A  IF  +   ++ V+W+ M+  Y       +A+EL  ++                   +
Sbjct: 274 ARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIR 333

Query: 331 SC-------------------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSS 371
            C                   GF  D +    +L    + G I      F+ M      S
Sbjct: 334 VCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVS 393

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           + A++S Y Q+ N +E +++F EMQ  G+ P++ TLA +L +CA +  L  G   H  ++
Sbjct: 394 FTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAI 453

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
                 D  + + LI +Y+KC + + A +VF R+ +  IV WN+MI    ++ + +EA +
Sbjct: 454 ICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALL 513

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMY 550
            F  M+   + P   +F  ++S+C+      +G+     + +D G +  +   + ++++ 
Sbjct: 514 LFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLL 573

Query: 551 CKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNGYGDEAVRLYKDM-IASGV 602
            + G       F + M  +  V  W  ++           A R+YK++ +  GV
Sbjct: 574 SRAGLFKEVHSFIEKMPLEPDVRVWGALL----------SACRVYKNVELGEGV 617



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 19/237 (8%)

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEK-------DGYVNDIFVGSALIEMYCKCGDIYGARQ 561
             +L SC +  S F+G+ +H  + K           N       L+++Y  C ++  AR 
Sbjct: 13  TVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARH 72

Query: 562 FFDMM--HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
            FD M    KN V WN +I  YA NG  +EA+ LY  M+  G+ P+  TF  +L ACS  
Sbjct: 73  VFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSAL 132

Query: 620 GLVDVGVEI---FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
                G EI      ++L+  V       T ++D   + G   +A+ + D+M  K D V 
Sbjct: 133 KEASEGREIHCDIKRLRLESNVYV----STALVDFYAKCGCLDDAKEVFDKMH-KRDVVA 187

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
           W  ++S   LH         A  L ++    S   S +  +  ++ + + LR  +E+
Sbjct: 188 WNSMISGFSLHEGSY--DEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEI 242


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 188/638 (29%), Positives = 319/638 (50%), Gaps = 58/638 (9%)

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           + H   +K GL  + ++   L  LYA+     HA  +F+E        + A++       
Sbjct: 157 QLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEG 216

Query: 201 RVVEALEMFRLMIR-KAVSI----DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
             VE L +FR M    +VSI    D+ S+S  L  CA                   + + 
Sbjct: 217 EWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCA----------------GLRKLLL 260

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ +H    K+  + D+ + ++L+D+Y K G M+ A  +F   P+  VV W  +I+GY Q
Sbjct: 261 GKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQ 320

Query: 316 KYQSTKAIELLQRMK-SCGFEPDEVTSINMLVACV------------------------- 349
                 A+    RM  S    PD VT +++  AC                          
Sbjct: 321 SGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLC 380

Query: 350 ----------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                     ++G IK    +F  M    + SW+ M++ Y+ +    + + LF EM  + 
Sbjct: 381 LANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKR 440

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           +KP+  T+  +L +CA +  LE G ++H  ++     ++  V++ L+ +Y KC   E A 
Sbjct: 441 IKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAV 500

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            +F+R+P+ D++ W  + +G + N +  E+   F+ M  +   P   +   +L++ ++L 
Sbjct: 501 DLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELG 560

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
              Q   +HA + K+G+ N+ F+G++LIE+Y KC  I  A + F  M  K+ VTW+ +I 
Sbjct: 561 ILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 620

Query: 580 GYAQNGYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            Y  +G G+EA++L+  M   S  KP+++TF++IL+ACSHSGL+  G+ +F+ M   + +
Sbjct: 621 AYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKL 680

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
           +P  +HY  M+D LGR G    A  +I+ MP +  P IW  LL +CR+H N+++ + AA+
Sbjct: 681 KPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAK 740

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
            LF LDP ++  Y LL+NIYS    W     +R L+ E
Sbjct: 741 NLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKE 778



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 150/544 (27%), Positives = 260/544 (47%), Gaps = 79/544 (14%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH+  L+ GL  D+F+  +L  LY++  + H A  LF + PH+ +Y WNA+L + C   +
Sbjct: 158 LHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGE 217

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                 LF +M        NN+ S      +EE+              P + +++   K+
Sbjct: 218 WVETLSLFRQM--------NNVSSV----SIEER--------------PDNYSVSIALKS 251

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
              L  +  G+  HG + K+ +D +++V +AL+ LY KCG    AV VF E  +P+ V +
Sbjct: 252 CAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLW 311

Query: 190 TAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           T+++SG  ++     AL  F R+++ + VS D V+L SV   CA+            S+ 
Sbjct: 312 TSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQ-----------LSNF 360

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
           K  R+VHG        + G +  L L+NSLL +Y K G + +A  +F  + ++ ++SW+ 
Sbjct: 361 KLGRSVHG-----FVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWST 415

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR---------- 358
           M+A Y      T  ++L   M     +P+ VT +++L AC    +++ G           
Sbjct: 416 MVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG 475

Query: 359 -------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                                    ++F+ MP   V +W  + S Y+ +    E++ +FR
Sbjct: 476 FEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFR 535

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
            M   G +PD   L  IL++ + +GIL+    +HA  +K     + ++ + LI +Y+KC 
Sbjct: 536 NMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCS 595

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVL 512
             E A +VF  +   D+V W+S+IA    +    EA   F QM   ++  P   +F ++L
Sbjct: 596 SIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISIL 655

Query: 513 SSCA 516
           S+C+
Sbjct: 656 SACS 659



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 212/454 (46%), Gaps = 84/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H  + +  +  D F+ + LI+LY+KC   + A                        
Sbjct: 261 GKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDA------------------------ 296

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITLAS 125
                   K+F E P+ +VV W ++IS   ++G  E AL+ +++M  +E   P  +TL S
Sbjct: 297 -------VKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVS 349

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   L + + GR  HG V + GLD  + +AN+LL LY K G  K+A  +F EMS+ +
Sbjct: 350 VASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKD 409

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            ++++ M++  A      + L++F  M+ K +  + V++ SVL  CA   C         
Sbjct: 410 IISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACA---C--------- 457

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                S    G ++H L +  GFE +  +S +L+DMY K    + A  +F+ +P++ V++
Sbjct: 458 ----ISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIA 513

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-----------CVRSGDI 354
           W V+ +GY       +++ + + M S G  PD +  + +L             C+ +  I
Sbjct: 514 WAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVI 573

Query: 355 KTGRE------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
           K G E                        +F  M    V +W++++++Y      +EA+K
Sbjct: 574 KNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALK 633

Query: 391 LFREM-QFRGVKPDRTTLAIILSSCAAMGILESG 423
           LF +M      KP+  T   ILS+C+  G+++ G
Sbjct: 634 LFYQMANHSDTKPNNVTFISILSACSHSGLIKEG 667



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 173/359 (48%), Gaps = 48/359 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  + R GL +   L N L+ LY K  +  +A +LF +M  KDI SW+ +++  C 
Sbjct: 363 GRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVA--CY 420

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +D                             NG E   L ++N+M ++   P  +T+ SV
Sbjct: 421 AD-----------------------------NGAETDVLDLFNEMLDKRIKPNWVTVVSV 451

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A   + ++E G + H L +  G +    V+ AL+ +Y KC   + AV +F  M + + 
Sbjct: 452 LRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDV 511

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           + +  + SG A    V E++ +FR M+      D+++L  +L   +  G      +  Q+
Sbjct: 512 IAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELG------ILQQA 565

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                       +H   IK GFE +  +  SL+++YAK   ++ A  +F  +  + VV+W
Sbjct: 566 ----------VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTW 615

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           + +IA YG   Q  +A++L  +M +    +P+ VT I++L AC  SG IK G  MFD M
Sbjct: 616 SSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIM 674



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 127/281 (45%), Gaps = 22/281 (7%)

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
           R  L  +L +C +     S  Q+H+  LK     D+++ + L  +Y++      A ++F 
Sbjct: 139 RNLLVKLLETCCSK---LSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQ 195

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN-----EMYPTQFSFATVLSSCAKL 518
             P   +  WN+++         +E    F+QM        E  P  +S +  L SCA L
Sbjct: 196 ETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGL 255

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
                G+ +H  ++K     D+FVGSALI++Y KCG +  A + F      + V W  +I
Sbjct: 256 RKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSII 315

Query: 579 HGYAQNGYGDEAVRLYKDMIAS-GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
            GY Q+G  + A+  +  M+ S  V PD +T V++ +AC+      +G  +       HG
Sbjct: 316 SGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSV-------HG 368

Query: 638 V--EPILDHYTCMIDCL----GRAGHFHEAEMLIDEMPCKD 672
                 LD+  C+ + L    G+ G    A  L  EM  KD
Sbjct: 369 FVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKD 409



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 68/110 (61%), Gaps = 5/110 (4%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LHA +++NG  ++ F+   LIE+Y+KC++   A  +F  M +KD+ +W++I++A      
Sbjct: 568 LHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQ 627

Query: 70  LEFAYKLFDEMP-----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
            E A KLF +M      + N V++ +++SA   +GL ++ +++++ M N+
Sbjct: 628 GEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNK 677



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 11/186 (5%)

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           + C+KLS S    Q+H+Q  K G V+D F+ + L  +Y +   I+ A + F     +   
Sbjct: 148 TCCSKLSIS----QLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVY 203

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDM-----IASGVKPDDITFVAILTACSHSGLVDVGVE 627
            WN ++  Y   G   E + L++ M     ++   +PD+ +    L +C+    + +G +
Sbjct: 204 LWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLG-K 262

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           + +       ++  +   + +ID   + G  ++A  +  E P K D V+W  ++S     
Sbjct: 263 VIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYP-KPDVVLWTSIISGYEQS 321

Query: 688 ANVRLA 693
            +  LA
Sbjct: 322 GSPELA 327


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 193/623 (30%), Positives = 311/623 (49%), Gaps = 53/623 (8%)

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           ++SL A+ G    AV     +  P+      M+ G A       AL  +R M+      D
Sbjct: 48  VVSLAAE-GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
             +   V+  CAR G G++                G+  H + IKLG E D++  NSL+ 
Sbjct: 107 RFTFPVVVKCCARLG-GLD---------------EGRAAHGMVIKLGLEHDVYTCNSLVA 150

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEV 339
            YAK G ++ AE +F  +P R +V+WN M+ GY      + A+   Q M  +   + D V
Sbjct: 151 FYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSV 210

Query: 340 TSINMLVAC----------------VRSG---DIKTG----------------REMFDSM 364
             I  L AC                +R G   DIK G                R +F +M
Sbjct: 211 GIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATM 270

Query: 365 PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
           P  +V +WN M+  Y+ +E   EA   F +M+  G++ +  T   +L++CA       G+
Sbjct: 271 PLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGR 330

Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
            VH   ++        + + L+ +Y K  + E +E++F +I    +V WN+MIA      
Sbjct: 331 SVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKE 390

Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
           +  EA   F ++    +YP  F+ +TV+ +   L S    RQ+H+ I   GY  +  + +
Sbjct: 391 MYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMN 450

Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKP 604
           A++ MY + GD+  +R+ FD M  K+ ++WN MI GYA +G G  A+ ++ +M  +G++P
Sbjct: 451 AVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQP 510

Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEML 664
           ++ TFV++LTACS SGLVD G   FN M  ++G+ P ++HY CM D LGR G   E    
Sbjct: 511 NESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQF 570

Query: 665 IDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRW 724
           I+ MP      +W  LL++ R   ++ +A+ AAE +F+L+  N+  Y +L+++Y+  GRW
Sbjct: 571 IESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRW 630

Query: 725 DDLRAVRELMSENCIVKDPAYSL 747
           +D+  VR LM E  + +    SL
Sbjct: 631 EDVERVRLLMKEKGLRRTEPISL 653



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 238/497 (47%), Gaps = 55/497 (11%)

Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
           Y  M  +G  P   T   V K    L  ++ GR  HG+VIK+GL+ ++Y  N+L++ YAK
Sbjct: 95  YRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAK 154

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI--DSVSLS 225
            G  + A  VF+ M   + VT+  M+ G         AL  F+ M   A+ +  DSV + 
Sbjct: 155 LGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEM-HDALEVQHDSVGII 213

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
           + L  C  E                  ++ G+++H   I+ G E D+ +  SLLDMY K 
Sbjct: 214 AALAACCLE----------------VSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKC 257

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
           G++  A  +F+ +P R+VV+WN MI GY    +  +A +   +M++ G + + VT+IN+L
Sbjct: 258 GEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLL 317

Query: 346 VACVRS-----------------------------------GDIKTGREMFDSMPSPSVS 370
            AC ++                                   G +++  ++F  + + ++ 
Sbjct: 318 AACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLV 377

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           SWN M+++Y   E + EAI LF E+  + + PD  T++ ++ +   +G L   +Q+H+  
Sbjct: 378 SWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYI 437

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
           +      +  + + ++ +Y++      +  +F ++   D++ WN+MI G +++     A 
Sbjct: 438 IGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTAL 497

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEM 549
             F +M+ N + P + +F +VL++C+      +G    +  +++ G +  I     + ++
Sbjct: 498 EMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDL 557

Query: 550 YCKCGDIYGARQFFDMM 566
             + GD+    QF + M
Sbjct: 558 LGREGDLREVLQFIESM 574



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 208/454 (45%), Gaps = 85/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+  H  +++ GL  D + CN L+  Y+K      A+ +FD MP +DI +W         
Sbjct: 126 GRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTW--------- 176

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                 N ++   V NGL   AL+ + +M ++     H ++  +
Sbjct: 177 ----------------------NTMVDGYVSNGLGSLALACFQEM-HDALEVQHDSVGII 213

Query: 127 FKASTALLDVE--HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
              +   L+V    G+  HG VI+ GL+++I V  +LL +Y KCG   +A  VF  M   
Sbjct: 214 AALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
             VT+  M+ G A  +R  EA + F  M  + + ++ V+  ++L  CA+     ES ++ 
Sbjct: 274 TVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQ----TESSLY- 328

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+ VH   ++  F   + L  +LL+MY K G ++S+E IF  +  +++V
Sbjct: 329 -----------GRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLV 377

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------- 349
           SWN MIA Y  K   T+AI L   + +    PD  T   ++ A V               
Sbjct: 378 SWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYI 437

Query: 350 --------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               RSGD+   RE+FD M S  V SWN M+  Y+     K A+
Sbjct: 438 IGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTAL 497

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           ++F EM++ G++P+ +T   +L++C+  G+++ G
Sbjct: 498 EMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 145/287 (50%), Gaps = 1/287 (0%)

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
             P   +S +++V+    G +    E   ++  P     N M+  ++ +     A+  +R
Sbjct: 37  LPPKRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYR 96

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ 453
            M   G +PDR T  +++  CA +G L+ G+  H   +K     D Y  + L+  Y+K  
Sbjct: 97  GMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLG 156

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN-EMYPTQFSFATVL 512
             E AERVF  +P  DIV WN+M+ G   N L   A   F++M    E+          L
Sbjct: 157 LVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAAL 216

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
           ++C    SS QG+++H  + + G   DI VG++L++MYCKCG++  AR  F  M  +  V
Sbjct: 217 AACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVV 276

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           TWN MI GYA N   DEA   +  M A G++ + +T + +L AC+ +
Sbjct: 277 TWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQT 323



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 176/394 (44%), Gaps = 52/394 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +++R+GL  D  +   L+++Y KC                              
Sbjct: 228 GKEIHGYVIRHGLEQDIKVGTSLLDMYCKCG----------------------------- 258

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             ++ +A  +F  MP R VV+WN +I     N   ++A   + +M  EG     +T  ++
Sbjct: 259 --EVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINL 316

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A        +GR  HG V++     ++ +  ALL +Y K G  + +  +F +++    
Sbjct: 317 LAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTL 376

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M++     +   EA+ +F  ++ + +  D  ++S+V          V + V   S
Sbjct: 377 VSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTV----------VPAFVLLGS 426

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                   H +Q+H   I LG+  +  + N++L MYA++GD+ ++  IF  +  + V+SW
Sbjct: 427 LR------HCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISW 480

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N MI GY    Q   A+E+   MK  G +P+E T +++L AC  SG +  G   F+ M  
Sbjct: 481 NTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQ 540

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                P +  +  M     +  + +E ++    M
Sbjct: 541 EYGMIPQIEHYGCMTDLLGREGDLREVLQFIESM 574


>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 170/490 (34%), Positives = 271/490 (55%), Gaps = 35/490 (7%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +Q+H      G  AD   +N+LL  YA  GD+ +A  +F  + +R+V+SWN++I G    
Sbjct: 62  RQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGG---- 117

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                          C+++GD+ + RE+FD MP+ +V++WNAM+
Sbjct: 118 -------------------------------CIKNGDLGSARELFDKMPTRNVATWNAMV 146

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           +  +     +++++ F  M+  G+ PD   L  +   CA +  + SG+QVHA  +++   
Sbjct: 147 AGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMD 206

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D  V + L  +Y +C      E V   +P L IV +N+ IAG + N     A  +F  M
Sbjct: 207 SDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMM 266

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R  E+ P   +F + +S C+ L++  QG+QVHAQ+ K G    + V ++L+ MY +CG +
Sbjct: 267 RGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCL 326

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             + + +D   G +    + MI     +G G +AV L+K M+  G +P+++TF+A+L AC
Sbjct: 327 GDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYAC 386

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SHSGL D G+E F  M   +G +P + HY C++D LGR+G   EAE LI  MP + D VI
Sbjct: 387 SHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVI 446

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W+ LLS+C+   N  +A+R AE +   DP++SAPY LL+NI ++  RW D+  VR++M E
Sbjct: 447 WKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMRE 506

Query: 737 NCIVKDPAYS 746
             I K+P  S
Sbjct: 507 KDIRKEPGVS 516



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 201/412 (48%), Gaps = 24/412 (5%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + LHA    +G   D F  N L+  Y+   +  +A+HLF+ +  +++ SWN ++    K+
Sbjct: 62  RQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKN 121

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            DL  A +LFD+MP RNV +WN +++ L   GL+E +L  +  M  EG  P    L SVF
Sbjct: 122 GDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVF 181

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           +    LLDV  GR+ H  V++ G+D ++ V N+L  +Y +CG       V   +     V
Sbjct: 182 RCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIV 241

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           +F   ++G  +      ALE F +M    V+ D V+  S +  C        SD+ A + 
Sbjct: 242 SFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCC--------SDLAALA- 292

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   GQQVH   IK G +  + +  SL+ MY++ G +  +E ++       +   +
Sbjct: 293 -------QGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLS 345

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
            MI+  G   Q  KA+EL ++M + G EP+EVT + +L AC  SG    G E F+ M   
Sbjct: 346 AMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKT 405

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               PSV  +N ++    +S    EA  L   M    V+ D      +LS+C
Sbjct: 406 YGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMP---VRADGVIWKTLLSAC 454



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/376 (21%), Positives = 156/376 (41%), Gaps = 60/376 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V+G+ +HA+++R+G+  D  + N L  +Y +C      + +   +P   I S+N  ++ +
Sbjct: 191 VSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGR 250

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                           +NG  E AL  ++ M      P  +T  
Sbjct: 251 -------------------------------TQNGDSEGALEYFSMMRGVEVAPDVVTFV 279

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S     + L  +  G++ H  VIK G+DK + V  +L+ +Y++CG    +  V++     
Sbjct: 280 SAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGL 339

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +    +AM+S      +  +A+E+F+ M+      + V+  ++L  C+  G   E   F 
Sbjct: 340 DLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFF 399

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-V 303
           +                +T   GF+  +   N ++D+  ++G +D AE +  ++P R+  
Sbjct: 400 E---------------LMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADG 444

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI------NMLVACVRSGDIKTG 357
           V W  +++      ++ K  ++ +R+     E D   S       N+     R GD+   
Sbjct: 445 VIWKTLLSA----CKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEV 500

Query: 358 REMF---DSMPSPSVS 370
           R++    D    P VS
Sbjct: 501 RKIMREKDIRKEPGVS 516


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 198/653 (30%), Positives = 321/653 (49%), Gaps = 76/653 (11%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV-FEEMSEPNEVTFTAMM 193
           +  H R+ H  +I   L  + Y    L++   +     H   + F     PN   FT+M+
Sbjct: 13  NFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSML 72

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
              +      + + MF  M                     +GCGV  D F       S  
Sbjct: 73  RFYSHLQDHAKVVLMFEHM---------------------QGCGVRPDAFVYPILIKSAG 111

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP--ERSVVSWNVMIA 311
             G   H   +KLG  +D  + N+++DMYA+ G +  A  +F  +P  ER V  WN M++
Sbjct: 112 NGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVS 171

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSS 371
           GY +     +A  L   M     E + +T   M+    +  D++  R  FD MP  SV S
Sbjct: 172 GYWKWESEGQAQWLFDVMP----ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVS 227

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           WNAMLS Y+Q+   +E ++LF EM   G++PD TT   ++S+C++      G    AASL
Sbjct: 228 WNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSS-----RGDPCLAASL 282

Query: 432 KTASH-----IDNYVASGLIGIYSKC---------------QRNEL-------------- 457
               H     ++ +V + L+ +Y+KC                RN +              
Sbjct: 283 VRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGN 342

Query: 458 ---AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLS 513
              A  +F+ +P  ++V WNSMIAG + N     A   FK+M    ++ P + +  +V+S
Sbjct: 343 LDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVIS 402

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
           +C  L +   G  V   + ++     I   +A+I MY +CG +  A++ F  M  ++ V+
Sbjct: 403 ACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVS 462

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           +N +I G+A +G+G EA+ L   M   G++PD +TF+ +LTACSH+GL++ G ++F S++
Sbjct: 463 YNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK 522

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
                +P +DHY CM+D LGR G   +A+  ++ MP +    ++  LL++ R+H  V L 
Sbjct: 523 -----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELG 577

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + AA +LF L+P NS  + LL+NIY+S GRW D+  +RE M +  + K   +S
Sbjct: 578 ELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWS 630



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 207/446 (46%), Gaps = 90/446 (20%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYS-------------------------- 34
           K A   G   HAH+L+ G   D F+ N +I++Y+                          
Sbjct: 108 KSAGNGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWN 167

Query: 35  -------KCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVS 87
                  K  +   AQ LFD MP +++ +W A+++   K  DLE A + FD MPER+VVS
Sbjct: 168 AMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVS 227

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA----LLDVEHGRRCH 143
           WN ++S   +NGL E+ L ++++M N G  P   T  +V  A ++     L     R  H
Sbjct: 228 WNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH 287

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE----------------------- 180
              I++    N +V  ALL +YAKCG    A  +F+E                       
Sbjct: 288 QKQIQL----NCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNL 343

Query: 181 ---------MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGV 230
                    M   N VT+ +M++G A+  +   A+E+F+ MI  K ++ D V++ SV+  
Sbjct: 344 DSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISA 403

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           C   G         +  N   R +   Q     IKL         N+++ MY++ G M+ 
Sbjct: 404 CGHLGA-------LELGNWVVRFLTENQ-----IKLSISG----HNAMIFMYSRCGSMED 447

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A+ +F  +  R VVS+N +I+G+       +AI L+  MK  G EPD VT I +L AC  
Sbjct: 448 AKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSH 507

Query: 351 SGDIKTGREMFDSMPSPSVSSWNAML 376
           +G ++ GR++F+S+  P++  +  M+
Sbjct: 508 AGLLEEGRKVFESIKDPAIDHYACMV 533


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 191/572 (33%), Positives = 295/572 (51%), Gaps = 71/572 (12%)

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F++M E + V++ AM+SG A+   V EA E+F  M  K    +S+S + +L    + G 
Sbjct: 52  LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGR 107

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL--SNSLLDMYAKNGDMDSAEVI 294
             ++    +S                      +AD  L   N ++  Y K   +  A  I
Sbjct: 108 IEDARRLFES----------------------KADWELISWNCMMGGYVKRNRLVDARGI 145

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  +PER  VSWN MI+GY Q  +  +A  L +         D  T   M+   V++G +
Sbjct: 146 FDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPV----RDVFTWTAMVSGYVQNGML 201

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
              R +FD MP  +  SWNA+++ Y Q +   +A +LF  M  + V           SS 
Sbjct: 202 DEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNV-----------SSW 250

Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
             M                   I  Y  +G I           A   F R+P+ D + W 
Sbjct: 251 NTM-------------------ITGYAQNGDIA---------QARNFFDRMPQRDSISWA 282

Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
           ++IAG + +    EA   F +M+++     + +F + LS+CA++++   G+QVH ++ K 
Sbjct: 283 AIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKA 342

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G  +  +VG+AL+ MYCKCG+I  A   F+ +  K  V+WN MI GYA++G+G EA+ L+
Sbjct: 343 GLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLF 402

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
           + M  +G+ PDD+T V +L+ACSH+GLVD G E F SM  D+G+     HYTCMID LGR
Sbjct: 403 ESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGR 462

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
           AG   +A+ L+  MP + D   W  LL + R+H N  L ++AA+ +F ++P NS  Y LL
Sbjct: 463 AGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLL 522

Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +N+Y++ GRW D+  +R  M +  + K P YS
Sbjct: 523 SNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 554



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 217/449 (48%), Gaps = 45/449 (10%)

Query: 33  YSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLI 92
           Y K N    A+ +FD+MP +D  SWN ++S   ++ +L  A +LF+E P R+V +W  ++
Sbjct: 133 YVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMV 192

Query: 93  SALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLD 152
           S  V+NG+ ++A  V++ M  +  V  +  +A   +       ++  R     + +    
Sbjct: 193 SGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKR----MDQARE----LFEAMPC 244

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           +N+   N +++ YA+ G    A   F+ M + + +++ A+++G A++    EAL +F  M
Sbjct: 245 QNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEM 304

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
            R    ++  + +S L  CA E   +E                G+QVH   +K G E+  
Sbjct: 305 KRDGERLNRSTFTSTLSTCA-EIAALEL---------------GKQVHGRVVKAGLESGC 348

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
           ++ N+LL MY K G++D A ++F  + E+ VVSWN MIAGY +     +A+ L + MK  
Sbjct: 349 YVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKT 408

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKE 387
           G  PD+VT + +L AC  +G +  G E F SM      + +   +  M+    ++    +
Sbjct: 409 GILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDD 468

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN-------- 439
           A  L + M F   +PD  T   +L +    G  E G++  AA +      DN        
Sbjct: 469 AQNLMKNMPF---EPDAATWGALLGASRIHGNTELGEK--AAKMIFEMEPDNSGMYVLLS 523

Query: 440 --YVASGLIGIYSKCQRNELAERVFHRIP 466
             Y ASG  G   +  R  + +R   ++P
Sbjct: 524 NLYAASGRWGDVGR-MRLRMRDRGVKKVP 551



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 159/340 (46%), Gaps = 28/340 (8%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N +I  Y +C     A+ LF+ MP +++ SWN +++   ++ D+  A   FD MP+R+ +
Sbjct: 220 NAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSI 279

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW  +I+   ++G  E+AL ++ +M  +G      T  S       +  +E G++ HG V
Sbjct: 280 SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV 339

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K GL+   YV NALL +Y KCG    A  VFE + E   V++  M++G A+     EAL
Sbjct: 340 VKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEAL 399

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
            +F  M +  +  D V++  VL  C+  G   +   +                + +T   
Sbjct: 400 MLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY---------------FYSMTQDY 444

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVSWNVMIAG---YGQKYQSTKA 322
           G  A+      ++D+  + G +D A+ +  N+P E    +W  ++     +G      KA
Sbjct: 445 GITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKA 504

Query: 323 IELLQRMKSCGFEPDE----VTSINMLVACVRSGDIKTGR 358
            +++  M     EPD     V   N+  A  R GD+   R
Sbjct: 505 AKMIFEM-----EPDNSGMYVLLSNLYAASGRWGDVGRMR 539



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 203/449 (45%), Gaps = 84/449 (18%)

Query: 345 LVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
           L  CVR  +++  R +FD MP   V SWNAMLS Y+Q+   KEA ++F EM      P +
Sbjct: 37  LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM------PCK 90

Query: 405 TTLAI--ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
            +++   +L++    G +E  +++     ++ +  +    + ++G Y K  R   A  +F
Sbjct: 91  NSISWNGMLAAYVQNGRIEDARRL----FESKADWELISWNCMMGGYVKRNRLVDARGIF 146

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
            R+PE D V WN+MI+G + N   +EA   F++    ++    F++  ++S   +     
Sbjct: 147 DRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLD 202

Query: 523 QGRQVHAQI-EKD---------GYV-----------------NDIFVGSALIEMYCKCGD 555
           + R+V   + EK+         GYV                  ++   + +I  Y + GD
Sbjct: 203 EARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGD 262

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           I  AR FFD M  +++++W  +I GYAQ+GYG+EA+ L+ +M   G + +  TF + L+ 
Sbjct: 263 IAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLST 322

Query: 616 CS-----------HSGLVDVGVE------------------IFNSMQLDHGVEPI-LDHY 645
           C+           H  +V  G+E                  I ++  +  G+E   +  +
Sbjct: 323 CAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSW 382

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKD---DPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
             MI    R G   EA ML + M       D V    +LS+C   ++  L  +  E  + 
Sbjct: 383 NTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSAC---SHTGLVDKGTEYFYS 439

Query: 703 LD-----PKNSAPYSLLANIYSSLGRWDD 726
           +        NS  Y+ + ++    GR DD
Sbjct: 440 MTQDYGITANSKHYTCMIDLLGRAGRLDD 468



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 55/271 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  +++ GL    ++ N L+ +Y KC N   A  +F+ +  K++ SWN +++   +
Sbjct: 332 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYAR 391

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVY-------------- 108
               + A  LF+ M +  +    V+   ++SA    GL +K    +              
Sbjct: 392 HGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSK 451

Query: 109 -------------------NKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI 149
                              N M N  F P   T  ++  AS    + E G +   ++ ++
Sbjct: 452 HYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM 511

Query: 150 GLDKN-IYVANALLSLYAKCG-WTK-------------HAVPVFEEMSEPNEV-TFTAMM 193
             D + +YV   L +LYA  G W                 VP +  +   N++ TFT   
Sbjct: 512 EPDNSGMYV--LLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGD 569

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSL 224
           S   + DR+   LE   L ++K   + S  L
Sbjct: 570 SVHPERDRIYTFLEELDLKMKKEGYVSSTKL 600


>gi|302775226|ref|XP_002971030.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
 gi|300161012|gb|EFJ27628.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
          Length = 846

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 196/710 (27%), Positives = 355/710 (50%), Gaps = 63/710 (8%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
            A++ A  ++  +E A ++F+ M     + ++++W  +++A  + G   +AL ++ KM  
Sbjct: 141 TAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMMTAYNQLGHAREALLLFRKMDL 200

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
           +G  P      +   A +++  +E G   H  ++   ++ +  V NALL+ YAK G    
Sbjct: 201 QGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGLVHE 260

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           +  +F  M   N VT++A+++  A+      A+E+FR M+   ++ + V+++ +  V   
Sbjct: 261 SRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGIAPNKVTIALLRIV--- 317

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
           E C  + D   Q+     R +H +             D+ ++ +L++MY + G +  A+ 
Sbjct: 318 EACD-QPDALDQA-----RELHTR----FFPGAAAAGDVVVATALVNMYGRCGSVSDAKT 367

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM--KSCGFEPDEVTSINMLVACVRS 351
           +F  +  R++ SWN M+  Y    +S +A+   + M  +  G +PD +T ++   AC   
Sbjct: 368 VFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMM 427

Query: 352 GDIKTGREM-------------------------------------FDSMPSPSVSSWNA 374
           GD+    E+                                      D MP  +V SW +
Sbjct: 428 GDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTNVISWTS 487

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+ +  Q+E+++ AI ++R MQ  G KPD  T+  ++ + A +  L+ G + HA +    
Sbjct: 488 MILACEQNEDNEAAIHVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFG 547

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL---DIVCWNSMIAGLSLNSLDIEAFM 491
                 V + L+ +Y      + AE VF  + +    D+V WNSM++  + N L  +A  
Sbjct: 548 FATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALR 607

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEMY 550
            F++M  +  +P + +F  +L++CA   S   Q  ++HA     G  +D  V + L+ MY
Sbjct: 608 TFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQAVKIHALAAACGLDSDTDVANTLLHMY 667

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            +CG++  AR+ F  +  KN V+W+ M    A NG  D A++ ++ M+  G++P+ +TF+
Sbjct: 668 SRCGNLSRARKVFHAITQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVTFI 727

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
           +IL+ CSH+GL+D  V    +M  DH ++P + HY C++D L RAG FH AE L   +P 
Sbjct: 728 SILSGCSHTGLMDEAVSYLYAMSSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHLP- 786

Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
             +PV W  LL +C +H +   A RAA+   +L P + APY  L+N  S+
Sbjct: 787 --NPVAWNSLLGACLVHGDAETAARAADTAAKLQPLDCAPYVSLSNAMST 834



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 177/734 (24%), Positives = 321/734 (43%), Gaps = 103/734 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H  ++ +G   D +LCN LI++Y +C + H A  +F  +  K++++W        
Sbjct: 13  AGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTI------ 66

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    LI A   NGL  +A+ ++ +M   G      T ++
Sbjct: 67  -------------------------LIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSA 101

Query: 126 VFKAST--ALLDVEHGRRCHGLVIKIGL----DKNIYVANALLSLYAKCGWTKHAVPVFE 179
           + +A +   L  +  G+  H  + + GL    +  +  + A++  YA+ G  + A  +FE
Sbjct: 102 ILEACSNLGLAFLSLGKTIHSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFE 161

Query: 180 EMS----EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
            M     +P+ + +TAMM+   +     EAL +FR M  + +  D  +  + +  C+   
Sbjct: 162 RMQLQGLDPDLIAWTAMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACS--- 218

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                               G  +H   +    E D  + N+LL+ YAK G +  +  +F
Sbjct: 219 -------------SIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGLVHESRSLF 265

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS--INMLVAC----- 348
           S++  ++VV+W+ ++A Y Q      A+EL + M   G  P++VT   + ++ AC     
Sbjct: 266 SSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGIAPNKVTIALLRIVEACDQPDA 325

Query: 349 -------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLS 377
                                           R G +   + +FD M   +++SWNAML 
Sbjct: 326 LDQARELHTRFFPGAAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLV 385

Query: 378 SYSQSENHKEAIKLFREM--QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT-- 433
           +YS ++   EA++ FR M  +  GVKPD  T      +C  MG L    ++H+   ++  
Sbjct: 386 TYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWP 445

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
           ++  D  + S LI +Y  C+    A +V   +P  +++ W SMI     N  +  A   +
Sbjct: 446 SNQTDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTNVISWTSMILACEQNEDNEAAIHVY 505

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
           + M+ +   P   +  TV+ + A L    +G + HAQ    G+     VG+AL+ +Y   
Sbjct: 506 RAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTS 565

Query: 554 GDIYGARQFFDMMHGK---NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
           GD+  A   F  +  +   + VTWN M+  + QNG  ++A+R ++ M+  G  PD  TFV
Sbjct: 566 GDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALRTFQRMLHHGRHPDKTTFV 625

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
            IL AC+      +     +++    G++   D    ++    R G+   A  +   +  
Sbjct: 626 NILNACAGDPSKLLQAVKIHALAAACGLDSDTDVANTLLHMYSRCGNLSRARKVFHAITQ 685

Query: 671 KDDPVIWEVLLSSC 684
           K + V W  + ++C
Sbjct: 686 K-NVVSWSAMAAAC 698



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/597 (25%), Positives = 278/597 (46%), Gaps = 59/597 (9%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           +++ GR  H  +I  G  ++ Y+ N L+ +Y +C     A+ VF  +S  N  T+T ++ 
Sbjct: 10  NLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILIV 69

Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
                    EA+E+FR M    V  D  + S++L  C+  G    S           + +
Sbjct: 70  AHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLS---------LGKTI 120

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP----ERSVVSWNVMI 310
           H  ++H   +KL     +  S +++D YA+NG ++ A  IF  +     +  +++W  M+
Sbjct: 121 H-SRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMM 179

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------------------- 348
             Y Q   + +A+ L ++M   G EPD    +  + AC                      
Sbjct: 180 TAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVE 239

Query: 349 -------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                         ++G +   R +F SM   +V +W+A++++Y+Q+ +H+ A++LFREM
Sbjct: 240 CDGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREM 299

Query: 396 QFRGVKPDRTTLAI--ILSSCAAMGILESGKQVHAASLK-TASHIDNYVASGLIGIYSKC 452
              G+ P++ T+A+  I+ +C     L+  +++H       A+  D  VA+ L+ +Y +C
Sbjct: 300 LLDGIAPNKVTIALLRIVEACDQPDALDQARELHTRFFPGAAAAGDVVVATALVNMYGRC 359

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM--RQNEMYPTQFSFAT 510
                A+ VF  +   +I  WN+M+   SLN   +EA  FF+ M      + P   +F +
Sbjct: 360 GSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVS 419

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVN--DIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
              +C  +    +  ++H++I +    N  D+ +GSALI+MY  C  + GA Q  D M  
Sbjct: 420 AADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRSLAGAAQVLDEMPR 479

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            N ++W  MI    QN   + A+ +Y+ M   G KPD +T V ++ A ++   +  G+E 
Sbjct: 480 TNVISWTSMILACEQNEDNEAAIHVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIE- 538

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK--DDPVIWEVLLSS 683
           F++     G          ++   G +G    AE +  E+  +  +D V W  +LS+
Sbjct: 539 FHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSA 595



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 181/400 (45%), Gaps = 36/400 (9%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           +R +E++S+ + +  +          D+   +A++        L  A ++ DEMP  NV+
Sbjct: 431 SRAVEIHSRISQSWPSNQ-------TDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTNVI 483

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SW ++I A  +N   E A+ VY  M   G  P  +T+ +V KA+  L D++ G   H   
Sbjct: 484 SWTSMILACEQNEDNEAAIHVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQA 543

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM---SEPNEVTFTAMMSGLAKTDRVV 203
              G   +  V NAL++LY   G  + A  VF+E+   S  + VT+ +M+S   +     
Sbjct: 544 AAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPN 603

Query: 204 EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLT 263
           +AL  F+ M+      D  +  ++L  CA +                S+ +   ++H L 
Sbjct: 604 QALRTFQRMLHHGRHPDKTTFVNILNACAGDP---------------SKLLQAVKIHALA 648

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
              G ++D  ++N+LL MY++ G++  A  +F  + +++VVSW+ M A       +  A+
Sbjct: 649 AACGLDSDTDVANTLLHMYSRCGNLSRARKVFHAITQKNVVSWSAMAAACAHNGDADGAL 708

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSS 378
           +  + M   G +P+ VT I++L  C  +G +        +M S     P+V  +  +L  
Sbjct: 709 QAFRGMLHGGIQPNAVTFISILSGCSHTGLMDEAVSYLYAMSSDHNLKPTVQHYACLLDL 768

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
            ++      A K  R  +     P+      +L +C   G
Sbjct: 769 LAR------AGKFHRAEELATHLPNPVAWNSLLGACLVHG 802



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 156/329 (47%), Gaps = 22/329 (6%)

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           L++G+ VH   + +  H D Y+ + LI +Y +C+    A  VFH +   ++  W  +I  
Sbjct: 11  LDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILIVA 70

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF--QGRQVHAQIEKDGYV 537
            + N L  EA   F++M  + +   +F+F+ +L +C+ L  +F   G+ +H++I + G  
Sbjct: 71  HTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQGLK 130

Query: 538 ----NDIFVGSALIEMYCKCGDIYGARQFFDMMH----GKNTVTWNEMIHGYAQNGYGDE 589
                 +   +A+I+ Y + G I  A + F+ M       + + W  M+  Y Q G+  E
Sbjct: 131 LTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMMTAYNQLGHARE 190

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+ L++ M   G++PD   FVA + ACS    ++ G  + +S  L   VE        ++
Sbjct: 191 ALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGT-VLHSRLLASSVECDGVVGNALL 249

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR---LD-- 704
           +   +AG  HE+  L   M  K + V W  ++++   + +       A ELFR   LD  
Sbjct: 250 NFYAKAGLVHESRSLFSSMKVK-NVVTWSAIVAAYAQNGH----HEPAVELFREMLLDGI 304

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVREL 733
             N    +LL  I  +  + D L   REL
Sbjct: 305 APNKVTIALL-RIVEACDQPDALDQAREL 332



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 136/316 (43%), Gaps = 64/316 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK---DIYSWNAILSA 63
           G   HA     G    T + N L+ LY    +  +A+++F ++  +   D+ +WN++LSA
Sbjct: 536 GIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSA 595

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
                                   WN       +NGL  +AL  + +M + G  P   T 
Sbjct: 596 ------------------------WN-------QNGLPNQALRTFQRMLHHGRHPDKTTF 624

Query: 124 ASVFKA----STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
            ++  A     + LL      + H L    GLD +  VAN LL +Y++CG    A  VF 
Sbjct: 625 VNILNACAGDPSKLL---QAVKIHALAAACGLDSDTDVANTLLHMYSRCGNLSRARKVFH 681

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            +++ N V+++AM +  A       AL+ FR M+   +  ++V+  S+L  C+  G   E
Sbjct: 682 AITQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVTFISILSGCSHTGLMDE 741

Query: 240 --SDVFA-QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
             S ++A  SD+     V  Q   C                LLD+ A+ G    AE + +
Sbjct: 742 AVSYLYAMSSDHNLKPTV--QHYAC----------------LLDLLARAGKFHRAEELAT 783

Query: 297 NLPERSVVSWNVMIAG 312
           +LP  + V+WN ++  
Sbjct: 784 HLP--NPVAWNSLLGA 797


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 192/650 (29%), Positives = 322/650 (49%), Gaps = 62/650 (9%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGW--TKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           HG + +     ++++ N LL+ Y + G   T  A  + +EM   N V+F  ++   ++  
Sbjct: 33  HGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAG 92

Query: 201 RVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
           +  E+LE F    R A V  D  + ++ L  C+R G                R   G+ V
Sbjct: 93  QTEESLETFLHAHRAAEVKADRFTYAAALAACSRAG----------------RLKEGKVV 136

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY---GQK 316
           H L +  G    + +SNSL+ MYA+ GDM  A  +F    ER  VSWN +++GY   G  
Sbjct: 137 HALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAH 196

Query: 317 YQSTKAIELLQR-------------MKSC---------------------GFEPDEVTSI 342
            +  +   L++R             +K C                     G + D   + 
Sbjct: 197 EEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLAS 256

Query: 343 NMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN--HKE----AIKLFREMQ 396
            M+    + G +     +F S+  P+V  +NAM++   + E   HKE    A+ L+ E+Q
Sbjct: 257 AMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQ 316

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
            RG++P   T + ++ +C   G +E GKQ+H   LK     D+++ S LI +Y      E
Sbjct: 317 SRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACME 376

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
              R F  +P+ D+V W +MI+G   N L   A   F ++    + P  F+ ++V+++CA
Sbjct: 377 DGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACA 436

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
            L+    G Q+     K G+     +G++ I MY + G++  A Q F  M   + V+W+ 
Sbjct: 437 SLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSA 496

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDH 636
           +I  +AQ+G   +A++ + +M+ + V P++ITF+ +LTACSH GLVD G+  +  M++++
Sbjct: 497 IISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEY 556

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA 696
           G+ P + H TC++D LGRAG   +AE  I +    D+PV+W+ LL SCR+H ++   +  
Sbjct: 557 GLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLV 616

Query: 697 AEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A+ +  L P +S  Y  L N+Y   G       +R+LM E  + K+P  S
Sbjct: 617 ADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLS 666



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 160/612 (26%), Positives = 297/612 (48%), Gaps = 74/612 (12%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCK--SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLE 101
           H+    P   ++  N +L+A C+  + D   A +L DEMP RN VS+N LI A  R G  
Sbjct: 35  HIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQT 94

Query: 102 EKALSVYNKMSNEGFVPT-HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANA 160
           E++L  +        V     T A+   A +    ++ G+  H L +  GL + ++V+N+
Sbjct: 95  EESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNS 154

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           L+S+YA+CG    A  VF+   E ++V++ +++SG  +     E L +F LM R A+ ++
Sbjct: 155 LVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLN 214

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
           S +L SV+  C+    G +  V         R +  + VH   +K G + DL L+++++D
Sbjct: 215 SFALGSVIKCCS----GGDGSV---------RGI-AEAVHGCVVKAGLDTDLFLASAMVD 260

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ------KYQSTKAIELLQRMKSCGF 334
           MYAK G +  A  +F ++ + +VV +N MIAG  +      K    +A+ L   ++S G 
Sbjct: 261 MYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGM 320

Query: 335 EPDEVTSINMLVACVRSGDIKTGREM---------------------------------- 360
           EP E T  +++ AC  +GDI+ G+++                                  
Sbjct: 321 EPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFR 380

Query: 361 -FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
            F S+P   V +W AM+S   Q+E  + A+ LF E+   G+KPD  T++ ++++CA++ +
Sbjct: 381 CFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAV 440

Query: 420 LESGKQVHAASLKTASHIDNYVASG--LIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
           + +G+Q+      T S  D + A G   I +Y++    E A + F  +   D+V W+++I
Sbjct: 441 VRTGEQMQC--FATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAII 498

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GY 536
           +  + +    +A  FF +M   ++ P + +F  VL++C+      +G + +  ++ + G 
Sbjct: 499 SSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGL 558

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
              +   + ++++  + G +  A  F  D +     V W  ++           + R+++
Sbjct: 559 CPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLL----------GSCRIHR 608

Query: 596 DMIASGVKPDDI 607
           DM    +  D I
Sbjct: 609 DMERGQLVADRI 620



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 207/461 (44%), Gaps = 92/461 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++HA  +  GL +  F+ N L+ +Y++C +   A+ +FD    +D  SW         
Sbjct: 133 GKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSW--------- 183

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                 N+L+S  +R G  E+ L V+  M           L SV
Sbjct: 184 ----------------------NSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSV 221

Query: 127 FKASTALLDVEHG--RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            K  +       G     HG V+K GLD ++++A+A++ +YAK G    AV +F+ + +P
Sbjct: 222 IKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDP 281

Query: 185 NEVTFTAMMSGLAKTDRVV------EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
           N V F AM++GL + +  V      EAL ++  +  + +     + SSV+  C   G   
Sbjct: 282 NVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAG--- 338

Query: 239 ESDVFAQSDNKFSRNVHGQQV-HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                   D +F + +HGQ + HC      F+ D  + ++L+D+Y  +  M+     F +
Sbjct: 339 --------DIEFGKQIHGQVLKHC------FQGDDFIGSALIDLYFNSACMEDGFRCFRS 384

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
           +P++ VV+W  MI+G  Q     +A+ L   +   G +PD  T  +++ AC         
Sbjct: 385 VPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTG 444

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      RSG+++   + F  M S  V SW+A++SS++Q 
Sbjct: 445 EQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQH 504

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
              ++A++ F EM    V P+  T   +L++C+  G+++ G
Sbjct: 505 GCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEG 545



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/484 (22%), Positives = 214/484 (44%), Gaps = 61/484 (12%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H  +++ GL  D FL + ++++Y+K      A  LF  +   ++  +NA+++  C+ + 
Sbjct: 239 VHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDE- 297

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                                   A V   +  +ALS+Y+++ + G  PT  T +SV +A
Sbjct: 298 ------------------------AAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRA 333

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
                D+E G++ HG V+K     + ++ +AL+ LY      +     F  + + + VT+
Sbjct: 334 CNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTW 393

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
           TAM+SG  + +    AL +F  ++   +  D  ++SSV+  CA                 
Sbjct: 394 TAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACA----------------S 437

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
            +    G+Q+ C   K GF+    + NS + MYA++G++++A   F  +    VVSW+ +
Sbjct: 438 LAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAI 497

Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP---- 365
           I+ + Q   + +A++    M      P+E+T + +L AC   G +  G   ++ M     
Sbjct: 498 ISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYG 557

Query: 366 -SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
             P+V     ++    ++    +A    R+  F     +      +L SC     +E G+
Sbjct: 558 LCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFH---DEPVVWQSLLGSCRIHRDMERGQ 614

Query: 425 QV--HAASLKTASH------IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
            V      L+ AS        + Y+ +G + + SK  R+ + ER   + P L    W  +
Sbjct: 615 LVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKI-RDLMKERGVKKEPGLS---WIEL 670

Query: 477 IAGL 480
            +G+
Sbjct: 671 RSGI 674



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 15/288 (5%)

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL--AERVFHRIPEL 468
           L SCA+   L     VH    +       ++ + L+  Y +    +   A R+   +P  
Sbjct: 20  LRSCAS---LPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRR 76

Query: 469 DIVCWNSMI-----AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
           + V +N +I     AG +  SL+     F    R  E+   +F++A  L++C++     +
Sbjct: 77  NAVSFNLLIDAYSRAGQTEESLET----FLHAHRAAEVKADRFTYAAALAACSRAGRLKE 132

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           G+ VHA    +G    +FV ++L+ MY +CGD+  AR+ FD+   ++ V+WN ++ GY +
Sbjct: 133 GKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLR 192

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS-GLVDVGVEIFNSMQLDHGVEPIL 642
            G  +E +R++  M    +  +     +++  CS   G V    E  +   +  G++  L
Sbjct: 193 VGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDL 252

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
              + M+D   + G   EA  L   +   +  V   ++   CR  A V
Sbjct: 253 FLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAV 300


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 174/491 (35%), Positives = 277/491 (56%), Gaps = 34/491 (6%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+ +H   I++G + DL+  N+L++MY+K        + F     R  +       G G+
Sbjct: 125 GESLHGYIIRVGLDFDLYTGNALMNMYSK--------LRFLEESGRQRL-------GAGE 169

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
            +      E+ +R +S       V ++++L     S D  + R++F+ MP   + SWN +
Sbjct: 170 VFD-----EMTERTRS-------VRTVSVL-----SED--SVRKIFEMMPEKDLVSWNTI 210

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           ++  +++  ++E +++ REM    +KPD  TL+ +L   A    +  GK++H  S++   
Sbjct: 211 IAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGL 270

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
             D YVAS LI +Y+KC R   + RVF  + E D + WNS+IAG   N L  E   FF+Q
Sbjct: 271 DADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQ 330

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M   ++ P  +SF++++ +CA L++   G+Q+H  I ++G+  +IF+ S+L++MY KCG+
Sbjct: 331 MLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGN 390

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           I  A+Q FD M  ++ V+W  MI G A +G   +A+ L++ M   G+KP+ + F+A+LTA
Sbjct: 391 IRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTA 450

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           CSH GLVD   + FNSM  D G+ P ++HY  + D LGRAG   EA   I  M       
Sbjct: 451 CSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGS 510

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMS 735
           IW  LLS+CR+H N+ +A++ A  +  +DP N+  Y LLANIYS+  RW +    R  M 
Sbjct: 511 IWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMR 570

Query: 736 ENCIVKDPAYS 746
              I K PA S
Sbjct: 571 RIGIRKTPACS 581



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 229/462 (49%), Gaps = 42/462 (9%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCN-------NTHSAQHLFDKMPHKDIYSWNA 59
           G+ LH +I+R GL  D +  N L+ +YSK             A  +FD+M  +      +
Sbjct: 125 GESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERT----RS 180

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           + +    S+D     K+F+ MPE+++VSWN +I+   RNGL E+ L +  +M      P 
Sbjct: 181 VRTVSVLSED--SVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPD 238

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             TL+SV       +D+  G+  HG  I+ GLD +IYVA++L+ +YAKC     +  VF 
Sbjct: 239 SFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFT 298

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
            ++E + +++ ++++G  +     E L  FR M+   +   S S SS++  CA       
Sbjct: 299 LLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAH------ 352

Query: 240 SDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                         +H G+Q+H    + GF+ ++ +++SL+DMYAK G++ +A+ IF  +
Sbjct: 353 -----------LTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRM 401

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
             R +VSW  MI G     Q+  AIEL ++M++ G +P+ V  + +L AC   G +    
Sbjct: 402 RLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAW 461

Query: 359 EMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           + F+SM      +P V  + A+     ++   +EA      M    + P  +  A +LS+
Sbjct: 462 KYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMH---IGPTGSIWATLLSA 518

Query: 414 CAAMGILESGKQVHAASLKT-ASHIDNYVASGLIGIYSKCQR 454
           C     ++  ++V    L+   ++   Y+   L  IYS  +R
Sbjct: 519 CRVHXNIDMAEKVANRILEVDPNNTGAYIL--LANIYSAARR 558



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 202/444 (45%), Gaps = 87/444 (19%)

Query: 75  KLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALL 134
           +LF+ +     ++W ++I     +GL  ++L  +  M   G  P H    SV K+   L+
Sbjct: 61  RLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLM 120

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA-------------------- 174
           D+  G   HG +I++GLD ++Y  NAL+++Y+K  + + +                    
Sbjct: 121 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180

Query: 175 ------------VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSV 222
                         +FE M E + V++  +++G A+     E L M R M    +  DS 
Sbjct: 181 VRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSF 240

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
           +LSSVL + A              +   SR   G+++H  +I+ G +AD+++++SL+DMY
Sbjct: 241 TLSSVLPLIA-------------ENVDISR---GKEIHGCSIRQGLDADIYVASSLIDMY 284

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           AK   +  +  +F+ L ER  +SWN +IAG  Q     + +   ++M     +P   +  
Sbjct: 285 AKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFS 344

Query: 343 NMLVAC-----------------------------------VRSGDIKTGREMFDSMPSP 367
           +++ AC                                    + G+I+T +++FD M   
Sbjct: 345 SIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR 404

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL-ESGKQV 426
            + SW AM+   +      +AI+LF +M+  G+KP+      +L++C+  G++ E+ K  
Sbjct: 405 DMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYF 464

Query: 427 HAAS--LKTASHIDNYVA-SGLIG 447
           ++ +     A  +++Y A S L+G
Sbjct: 465 NSMTRDFGIAPGVEHYAAVSDLLG 488



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 130/294 (44%), Gaps = 35/294 (11%)

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
            +Q+HA  LK  +     ++  L  IYS       + R+F+ I     + W S+I   + 
Sbjct: 25  AQQLHAQVLKFQASSLCNLSLLLS-IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTS 83

Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
           + L  ++   F  M  + +YP    F +VL SCA L     G  +H  I + G   D++ 
Sbjct: 84  HGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYT 143

Query: 543 GSALIEMYCK-------------CGDIY-------------------GARQFFDMMHGKN 570
           G+AL+ MY K              G+++                     R+ F+MM  K+
Sbjct: 144 GNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKD 203

Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
            V+WN +I G A+NG  +E +R+ ++M  + +KPD  T  ++L   + +  +  G EI +
Sbjct: 204 LVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEI-H 262

Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
              +  G++  +   + +ID   +     ++   +  +  + D + W  +++ C
Sbjct: 263 GCSIRQGLDADIYVASSLIDMYAKCTRVADS-CRVFTLLTERDGISWNSIIAGC 315


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 152/419 (36%), Positives = 252/419 (60%)

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
           ++ + G   D + +  +L  C +  D+ T   +F+ M      SW+ M+  + ++ +++ 
Sbjct: 25  QVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYER 84

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
             + FRE+   G KPD  +L  ++ +C     L  G+ +H+  LK   H+DN+V S L+ 
Sbjct: 85  CFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVD 144

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+KC   + A+++F R+P+ D+V    MIAG +      E+++ F QMR++   P + +
Sbjct: 145 MYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVA 204

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
             T++++CAKL +  + R VH  +    Y  D+ +G+A+I+MY KCG I  +R+ FD M 
Sbjct: 205 MVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRME 264

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            KN ++W+ MI  Y  +G G EA+ L+  M+ SG+ P+ ITF+++L ACSH+GLVD G++
Sbjct: 265 QKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQ 324

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           +F+ M + +GV P + HYTCM+D LGRAG   +A  LI+ M  + D  IW   L +CR+H
Sbjct: 325 LFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIH 384

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             V LA++AA+ L  L  +N   Y LL+NIY++ GRW D+  +R LM++  + K P Y+
Sbjct: 385 RQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYT 443



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 224/479 (46%), Gaps = 49/479 (10%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+   N +L    K  DL  A+ LF++M ER+ VSW+ +I   V+NG  E+    + ++ 
Sbjct: 34  DLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELI 93

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
             G  P + +L  V KA    + +  GR  H  V+K GL  + +V + L+ +YAKCG   
Sbjct: 94  RAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMID 153

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
           +A  +F+ M + + VT T M++G A+  +  E+  +F  M R     D V++ +++  CA
Sbjct: 154 NAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACA 213

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
           + G          + NK       + VH       +  D+ L  +++DMYAK G +DS+ 
Sbjct: 214 KLG----------AMNK------ARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSR 257

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            IF  + +++V+SW+ MI  YG   Q  +A+EL   M + G  P+ +T I++L AC  +G
Sbjct: 258 EIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAG 317

Query: 353 DIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
            +  G ++F  M       P V  +  M+    ++    +A++L   M+   V+ D    
Sbjct: 318 LVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENME---VEKDEGIW 374

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDN----------YVASGLIGIYSKCQRNEL 457
              L +C     ++  ++  AA L  +    N          Y  +G     +K  RN +
Sbjct: 375 CAFLGACRIHRQVDLAEK--AAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKI-RNLM 431

Query: 458 AERVFHRIPELDIVCWNSMIA--GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
           A+R   +IP    +  +++I   G   NS           +R NE+Y    S +  L S
Sbjct: 432 AKRRLKKIPGYTWIEVDNIIYRFGAGDNS----------HLRSNEIYEMLKSLSQKLES 480



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/423 (22%), Positives = 182/423 (43%), Gaps = 68/423 (16%)

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           ++ D F  +  K       +QVH      G   DL ++N LL M AK+ D+ +A ++F+ 
Sbjct: 1   MDPDFFISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNK 60

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
           + ER  VSW+VMI G+ +     +  +  + +   G +PD  +   ++ AC         
Sbjct: 61  MEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMG 120

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      + G I   +++FD MP   + +   M++ Y++ 
Sbjct: 121 RLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAEC 180

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
               E+  LF +M+  G  PD+  +  I+++CA +G +   + VH         +D  + 
Sbjct: 181 GKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELG 240

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + +I +Y+KC   + +  +F R+ + +++ W++MI     +    EA   F  M  + + 
Sbjct: 241 TAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGII 300

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P + +F ++L +C+           HA +  DG           ++++      YG R  
Sbjct: 301 PNRITFISLLYACS-----------HAGLVDDG-----------LQLFSLMSVSYGVRP- 337

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
            D+ H      +  M+    + G  D+A+RL ++M    V+ D+  + A L AC     V
Sbjct: 338 -DVKH------YTCMVDLLGRAGRLDQALRLIENM---EVEKDEGIWCAFLGACRIHRQV 387

Query: 623 DVG 625
           D+ 
Sbjct: 388 DLA 390



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 133/287 (46%), Gaps = 20/287 (6%)

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           KQVHA    T    D  VA+ L+ + +K +    A  +F+++ E D V W+ MI G   N
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
                 F  F+++ +    P  FS   V+ +C        GR +H+ + K+G   D FV 
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           S L++MY KCG I  A+Q FD M  K+ VT   MI GYA+ G  +E+  L+  M   G  
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFV 199

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFN-------SMQLDHGVEPILDHYTCMIDCLGRAG 656
           PD +  V I+ AC+  G ++    + +       S+ ++ G        T MID   + G
Sbjct: 200 PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELG--------TAMIDMYAKCG 251

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
               +  + D M  K + + W  ++ +   H       R A ELF +
Sbjct: 252 SIDSSREIFDRMEQK-NVISWSAMIGAYGYHGQ----GREALELFHM 293



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 135/294 (45%), Gaps = 46/294 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + G+L+H+ +L+NGL  D F+C+ L+++Y+KC    +A+                     
Sbjct: 118 IMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAK--------------------- 156

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                     +LFD MP++++V+   +I+     G   ++  ++++M  +GFVP  + + 
Sbjct: 157 ----------QLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMV 206

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           ++  A   L  +   R  H  V       ++ +  A++ +YAKCG    +  +F+ M + 
Sbjct: 207 TIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQK 266

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           N ++++AM+       +  EALE+F +M+   +  + ++  S+L  C+  G  V+  +  
Sbjct: 267 NVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGL-VDDGL-- 323

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
                       Q    +++  G   D+     ++D+  + G +D A  +  N+
Sbjct: 324 ------------QLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENM 365



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 91/163 (55%), Gaps = 5/163 (3%)

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           +S+  K  + FQ +QVHAQ+   G ++D+ V + L+ M  K  D+  A   F+ M  ++ 
Sbjct: 7   ISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDP 66

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
           V+W+ MI G+ +NG  +   + ++++I +G KPD+ +   ++ AC  +  + +G  + +S
Sbjct: 67  VSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMG-RLIHS 125

Query: 632 MQLDHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKD 672
             L +G+   LD++ C  ++D   + G    A+ L D MP KD
Sbjct: 126 TVLKNGLH--LDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKD 166


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 171/490 (34%), Positives = 278/490 (56%), Gaps = 20/490 (4%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNL------PERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
           NS++  +A++GD   A   FS++      P RS  ++   I      Y      ++ Q+ 
Sbjct: 55  NSIIADFARSGDSLQALYAFSSMRKLSLHPNRS--TFPCTIKSCSSLYDLCAGKQIHQQA 112

Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
              G+  D   +  ++    + G +   R++FD +P  +V SW +M+S Y Q+E  +EA+
Sbjct: 113 FVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAV 172

Query: 390 KLFRE-----------MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
            LF+E           +   GV  D   L  ++S+CA + +    + VH  ++K      
Sbjct: 173 FLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGC 232

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-R 497
             V + L+  Y+KC    ++ +VF  + E D+  WNS+IA  + N L +EAF  F  M +
Sbjct: 233 LAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVK 292

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           + E+     + + VL +CA   +   G+ +H Q+ K    +++ VG+++++MYCKCG + 
Sbjct: 293 RGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVE 352

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            AR+ FD +  KN  +W  M+ GY  +G+G EA++++ +MI  G+KP+ ITFV++L ACS
Sbjct: 353 MARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS 412

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           H+GL+  G   FN M+ +  VEP ++HY+CM+D LGRAG+  EA  LI EM  K D ++W
Sbjct: 413 HAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVW 472

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
             LL +CR+H NV L + +A +LF+LDP N   Y LL+NIY+  GRWDD+  +R LM  +
Sbjct: 473 GSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNH 532

Query: 738 CIVKDPAYSL 747
            ++K P YS+
Sbjct: 533 GLLKTPGYSI 542



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 206/437 (47%), Gaps = 69/437 (15%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AGK +H      G   D F+ + LI++YSKC   + A+                      
Sbjct: 104 AGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDAR---------------------- 141

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSV-----------YNKMSNE 114
                    KLFDE+PERNVVSW ++IS  V+N    +A+ +           Y+++   
Sbjct: 142 ---------KLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGV 192

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRC-HGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
           G     + L  V  A  A + V+    C HGL +K G +  + V N L+  YAKCG    
Sbjct: 193 GVGVDSVLLGCVISA-CARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISV 251

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCA 232
           +  VF+ M E +  ++ ++++  A+    VEA  +F  M+++  V  ++V+LS+VL  CA
Sbjct: 252 SRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACA 311

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G             +  + +H Q      +K+  E +L +  S++DMY K G ++ A 
Sbjct: 312 HSGA-----------LQIGKCIHDQ-----VVKMELEDNLVVGTSIVDMYCKCGRVEMAR 355

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
             F  L  ++V SW VM+AGYG      +A+++   M  CG +P+ +T +++L AC  +G
Sbjct: 356 KAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAG 415

Query: 353 DIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
            +K G   F+ M       P +  ++ M+    ++   KEA  L +EM+   VKPD    
Sbjct: 416 LLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMK---VKPDFIVW 472

Query: 408 AIILSSCAAMGILESGK 424
             +L +C     +E G+
Sbjct: 473 GSLLGACRIHKNVELGE 489



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 187/387 (48%), Gaps = 63/387 (16%)

Query: 84  NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCH 143
           +V SWN++I+   R+G   +AL  ++ M      P   T     K+ ++L D+  G++ H
Sbjct: 50  SVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIH 109

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
                 G   +I+VA+AL+ +Y+KCG+   A  +F+E+ E N V++T+M+SG  + +R  
Sbjct: 110 QQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAR 169

Query: 204 EALEMFR--LMIRKA---------VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           EA+ +F+  L++ +          V +DSV L  V+  CAR        V  +S      
Sbjct: 170 EAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACAR--------VCVKSVT---- 217

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
               + VH L +K GFE  L + N+L+D YAK G++  +  +F  + E  V SWN +IA 
Sbjct: 218 ----ECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAV 273

Query: 313 YGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTG-------------- 357
           Y Q   S +A  L   M   G    + VT   +L+AC  SG ++ G              
Sbjct: 274 YAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELED 333

Query: 358 ---------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                                R+ FD +   +V SW  M++ Y    + KEA+K+F EM 
Sbjct: 334 NLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMI 393

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESG 423
             G+KP+  T   +L++C+  G+L+ G
Sbjct: 394 RCGIKPNYITFVSVLAACSHAGLLKEG 420



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 186/373 (49%), Gaps = 17/373 (4%)

Query: 358 REMFDS-MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           R MF   +   SV SWN++++ +++S +  +A+  F  M+   + P+R+T    + SC++
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 417 MGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSM 476
           +  L +GKQ+H  +       D +VAS LI +YSKC     A ++F  IPE ++V W SM
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158

Query: 477 IAGLSLNSLDIEAFMFFK-----------QMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
           I+G   N    EA   FK           ++    +         V+S+CA++       
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
            VH    K G+   + VG+ L++ Y KCG+I  +R+ FD M   +  +WN +I  YAQNG
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278

Query: 586 YGDEAVRLYKDMIASG-VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
              EA  L+ DM+  G V+ + +T  A+L AC+HSG + +G  I + + +   +E  L  
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQV-VKMELEDNLVV 337

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR-- 702
            T ++D   + G    A    D +  K+    W V+++   +H + + A +   E+ R  
Sbjct: 338 GTSIVDMYCKCGRVEMARKAFDRLKRKNVKS-WTVMVAGYGMHGHGKEAMKVFYEMIRCG 396

Query: 703 LDPKNSAPYSLLA 715
           + P      S+LA
Sbjct: 397 IKPNYITFVSVLA 409


>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 221/789 (28%), Positives = 365/789 (46%), Gaps = 141/789 (17%)

Query: 1   KKAHVAGKLLHAHILRNG-LFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWN 58
           ++A   G+ +HA I++ G +F  + ++  +L+  Y+KC+N  ++  LF ++  K      
Sbjct: 23  ERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVRLK------ 76

Query: 59  AILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
                                    NV SW  +I    R G  ++AL  + +M   G +P
Sbjct: 77  -------------------------NVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLP 111

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT------K 172
            +  L +V KA   L  +  G+  HGLV                     CG+        
Sbjct: 112 DNFVLPNVLKACGGLEWIRIGKVVHGLV--------------------SCGYVWKMWGGG 151

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
                   M + N V + +M+ G  +     EA+E+F  M  + V    V+LSS L   A
Sbjct: 152 GCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASA 211

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G        A  D        G+Q H + +  G E   +L +SL++ Y+K G ++ AE
Sbjct: 212 NLG--------ALQD--------GKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAE 255

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----- 347
            +FS + E+ VV+WN++I+GY Q  +  KA+ +   M+      D VT   ++ A     
Sbjct: 256 SVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMR 315

Query: 348 -----------CVRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLS 377
                      C+R+                     I   R +F+S  +  +  WN ML+
Sbjct: 316 NLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLA 375

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
           ++++  +  EA+ LF +MQ   V P+     +I  +   +G L SG QV+ A        
Sbjct: 376 AFAELGHSGEALNLFYQMQLESVPPN-----VISWNSLILGFLNSG-QVNEAK------- 422

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D ++    +G+                  + ++V W ++I+GL+ +    EA + F++M+
Sbjct: 423 DMFLQMQSLGV------------------QPNLVTWTTLISGLARSGFGYEAILTFQRMQ 464

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
           +  + P   S   VL +C  L+S   GR +H  + +      I + ++L++MY KCGD  
Sbjct: 465 EAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRD 524

Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
            A++ FDM+  K    +N MI G+A +G   EA+ LY+ +   G+KPD+ITF   L ACS
Sbjct: 525 QAKRVFDMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACS 584

Query: 618 HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIW 677
           H+ +V  G+E+F  M  +H + P ++HY CM+  L R G   EA  LI  MP K D  I 
Sbjct: 585 HAMMVSEGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQIL 644

Query: 678 EVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
             LL++CR H  + L +  + +L +L P NS  Y  ++N Y++ GRWD+++ VR+LM E 
Sbjct: 645 GSLLAACREHNKIELEEYLSNQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKER 704

Query: 738 CIVKDPAYS 746
            + K P  S
Sbjct: 705 GLRKIPGCS 713



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 259/516 (50%), Gaps = 31/516 (6%)

Query: 250 FSRNVH-GQQVHCLTIKLG--FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           + R +H G+Q+H   +K G  F  + ++   L+  YAK  + +++  +F  +  ++V SW
Sbjct: 22  YERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVRLKNVFSW 81

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-----VRSGDIKTG---- 357
             +I    +K    +A+   + M+  G  PD     N+L AC     +R G +  G    
Sbjct: 82  AAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVVHGLVSC 141

Query: 358 ------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                       ++    MP  +  +WN+M+  Y Q+  ++EAI++F EM+  GV+P + 
Sbjct: 142 GYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQV 201

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           TL+  LS+ A +G L+ GKQ HA ++     +   + S LI  YSK    E AE VF R+
Sbjct: 202 TLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRM 261

Query: 466 PELDIVCWNSMIAG-LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
            E D+V WN +I+G + +  +D +A      MR   +     + AT++S+ A + +   G
Sbjct: 262 LEKDVVTWNLLISGYVQIGEVD-KALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLG 320

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
           ++ H    ++   +D+ V S++++MY KC  I  AR+ F+    K+ + WN M+  +A+ 
Sbjct: 321 KEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAEL 380

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G+  EA+ L+  M    V P+ I++ +++    +SG V+   ++F  MQ   GV+P L  
Sbjct: 381 GHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQ-SLGVQPNLVT 439

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMP---CKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           +T +I  L R+G  +EA +    M     K + V    +L +C   A++++ +     L 
Sbjct: 440 WTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALHGYLI 499

Query: 702 RLDPKNSAPYSL-LANIYSSLGRWDDLRAVRELMSE 736
           R     S P +  L ++Y+  G  D  + V +++ +
Sbjct: 500 RHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPD 535



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 137/291 (47%), Gaps = 18/291 (6%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS--HIDNYVASGLIGIYSKC 452
           M+ + ++        +L  C     L +G+Q+HA  +K  +   ++ Y+ + L+  Y+KC
Sbjct: 1   MELKNLRIGPEVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKC 60

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              E +  +F R+   ++  W ++I          EA + FK+M++N + P  F    VL
Sbjct: 61  DNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVL 120

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
            +C  L     G+ VH  +   GYV  ++ G                ++    M  +N V
Sbjct: 121 KACGGLEWIRIGKVVHGLV-SCGYVWKMWGGGG-------------CKKGVCGMPQRNAV 166

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
            WN MI GY QNG  +EA+ ++ +M   GV+P  +T  + L+A ++ G +  G +  +++
Sbjct: 167 AWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQ-GHAI 225

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            +  G+E   +  + +I+   + G   +AE +   M  + D V W +L+S 
Sbjct: 226 AVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRM-LEKDVVTWNLLISG 275


>gi|218189824|gb|EEC72251.1| hypothetical protein OsI_05387 [Oryza sativa Indica Group]
          Length = 566

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 187/527 (35%), Positives = 285/527 (54%), Gaps = 39/527 (7%)

Query: 258 QVHCLTIKLGFEADLHLSNS-LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           Q H    KLGF A    +N+ LL  Y ++  +  A+ +F  +P R+ V+WN +I G+ Q 
Sbjct: 32  QCHAAATKLGFSASNPFANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQS 91

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------------- 357
                A+    RM   G  P   +  ++LVACVR  +   G                   
Sbjct: 92  TAPDLAVAAFARMVRAGVSPTASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVG 151

Query: 358 ----------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                           +++F  M   +V+++ A+++ +  S    +A+ L REM+  GV 
Sbjct: 152 TALVDMYAKCRRLGAAQQVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVA 211

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P+  T + +LSS A+   ++ GKQVH A LK     D +V S L+ +YSKC   E   +V
Sbjct: 212 PNLMTYSSLLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKV 271

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
              +   D V +NS+I+GLS      EAF  F +MR++      F+FA++L +    SS 
Sbjct: 272 QMSVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSL 331

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
            +GRQVH  I K GY + + V ++LI MY + G I  +   F  M   N V+WN ++ G 
Sbjct: 332 LEGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGC 391

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG--VE 639
           AQ+G+G E V +++ M    V+PD ITF+++LTACSH GLVD G+E FN M+ D G  V 
Sbjct: 392 AQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMK-DKGYLVG 450

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
               HY CM+D LGRAG+ +EAE LI+ MP K    ++  LLS+C++H N+ +A R ++ 
Sbjct: 451 ARTKHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIAIRVSKR 510

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L  L+P +S+ +  L+N ++  GRW +   +RE MS   IVK+P++S
Sbjct: 511 LMELNPHDSSVHVQLSNAFAGDGRWGNAAEIRETMSGKGIVKEPSWS 557



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 205/422 (48%), Gaps = 56/422 (13%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG +LH+  LR G F    +   L+++Y+KC    +AQ                      
Sbjct: 131 AGAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQ---------------------- 168

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                    ++F EM E+NV ++  L++  V +     A+ +  +M   G  P  +T +S
Sbjct: 169 ---------QVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPNLMTYSS 219

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  +  +  D++HG++ H  V+K GL+ + +V +AL+++Y+KCG  +  V V   +S  +
Sbjct: 220 LLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQD 279

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +V+F +++SGL+   R  EA + F  M R    +D  + +S+L     +  G  S +   
Sbjct: 280 QVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASIL-----KAIGSSSSL--- 331

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                   + G+QVH L +K+G+++ + + NSL+ MYA++G +  +  +F ++   ++VS
Sbjct: 332 --------LEGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVS 383

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN +++G  Q     + +E+ ++M+    +PD +T +++L AC   G +  G E F+ M 
Sbjct: 384 WNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMK 443

Query: 366 ------SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                       +  M+    ++    EA  L   M    +KP  +    +LS+C   G 
Sbjct: 444 DKGYLVGARTKHYACMVDLLGRAGYLNEAEYLINGMP---IKPGASVYRALLSACQIHGN 500

Query: 420 LE 421
           LE
Sbjct: 501 LE 502



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 196/404 (48%), Gaps = 51/404 (12%)

Query: 55  YSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
           ++  A+L+  C+S  L  A  LFD+MP R  V+WN LI    ++   + A++ + +M   
Sbjct: 48  FANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQSTAPDLAVAAFARMVRA 107

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G  PT  +++SV  A   L +   G   H + ++ G   ++ V  AL+ +YAKC     A
Sbjct: 108 GVSPTASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAA 167

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             VF EM E N  TFTA+++G   + R  +A+ + R M R  V+ + ++ SS+L      
Sbjct: 168 QQVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPNLMTYSSLL------ 221

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
                   FA  ++      HG+QVHC  +K G E D  + ++L+ MY+K G  +    +
Sbjct: 222 ------SSFASPEDI----DHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKV 271

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
             ++  +  VS+N +I+G     +  +A +    M+  G + D  T  ++L A   S  +
Sbjct: 272 QMSVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSL 331

Query: 355 KTGRE-----------------------------------MFDSMPSPSVSSWNAMLSSY 379
             GR+                                   +F SM +P++ SWN+++S  
Sbjct: 332 LEGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGC 391

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +Q  + KE +++F +M+   V+PD  T   +L++C+ +G+++ G
Sbjct: 392 AQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKG 435



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 228/525 (43%), Gaps = 86/525 (16%)

Query: 141 RCHGLVIKIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           +CH    K+G    N +   ALL+ Y +    + A  +F++M     VT+  ++ G A++
Sbjct: 32  QCHAAATKLGFSASNPFANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQS 91

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-EGCGVESDVFAQSDNKFSRNVHGQQ 258
                A+  F  M+R  VS  + S+SSVL  C R E  G                  G  
Sbjct: 92  TAPDLAVAAFARMVRAGVSPTASSVSSVLVACVRLENAGA-----------------GAM 134

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +H + ++ GF A + +  +L+DMYAK   + +A+ +F  + E++V ++  ++ G+    +
Sbjct: 135 LHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQQVFGEMEEKNVATFTALVTGFVLSRR 194

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------------------ 360
              A+ L++ M+  G  P+ +T  ++L +     DI  G+++                  
Sbjct: 195 PHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSA 254

Query: 361 FDSMPSP------------SVS-----SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
             +M S             SVS     S+N+++S  S     KEA + F EM+  G   D
Sbjct: 255 LVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMD 314

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             T A IL +  +   L  G+QVH   LK        V + LI +Y++      +  VF 
Sbjct: 315 VFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESNGVFI 374

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            +   ++V WNS+++G + +    E    F+QMR+  + P   +F +VL++C+ +    +
Sbjct: 375 SMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDK 434

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           G +    ++  GY                   + GAR          T  +  M+    +
Sbjct: 435 GLEYFNLMKDKGY-------------------LVGAR----------TKHYACMVDLLGR 465

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            GY +EA  L   M    +KP    + A+L+AC   G +++ + +
Sbjct: 466 AGYLNEAEYLINGM---PIKPGASVYRALLSACQIHGNLEIAIRV 507


>gi|5803274|dbj|BAA83584.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|55296350|dbj|BAD68395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|125596022|gb|EAZ35802.1| hypothetical protein OsJ_20095 [Oryza sativa Japonica Group]
          Length = 763

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 213/766 (27%), Positives = 357/766 (46%), Gaps = 89/766 (11%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           NRL+  + +     +A+ +FD MP +D+ SWN I++ Q                      
Sbjct: 39  NRLMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQ---------------------- 76

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
                     R G   +A+  + +M  +GF P H + ++   A   L  +E GR  HGLV
Sbjct: 77  ---------ARAGSHGRAVGAFLEMRRQGFRPDHTSFSTALSACARLEALEMGRCVHGLV 127

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
            K     N++V  +L+++YA CG       V + +  PN   + A++SGL    RV  A 
Sbjct: 128 FKSCSSGNVFVGASLITMYANCGVVSCLEQVLDGVESPNVALWNALISGLVMNHRVGYAR 187

Query: 207 EMF-RLMIRKAVSIDS--------------------VSLSSVLGVCAREGCGVESDVFAQ 245
           + F R+ +R  VS  +                    + + + +  C   G  V  + F++
Sbjct: 188 KAFDRMPVRNVVSWTAMIKGHFTAHEVDMAFQLFKLMPVKNSVSWCVMIGGFVTHEKFSE 247

Query: 246 SDNKFS---------RNV----------------HGQQVHCLTIKLGFEADLHLSNSLLD 280
           +   F+          NV                 G+ +H L +K GF  DL L  SL+ 
Sbjct: 248 AVELFNSLMMNGEEVTNVILVKIVNAFAGMKSIRGGRCIHGLAVKSGFAYDLVLEASLVL 307

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MY K+ D+  A + F  +    V SWN M+ GY    +  +A +L   M +     D+++
Sbjct: 308 MYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSDKIDEARKLFDSMNN----RDKIS 363

Query: 341 SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
             +M+   +  G I    E++  M   S+ +  A++S +  +    +A    R+M +   
Sbjct: 364 WNSMINGYINDGRIADATELYSKMTEKSLEAATALMSWFIDNGMLDKA----RDMFYNMP 419

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           + D  +   +L      G ++    +     K      N + SGL   + + +  E A +
Sbjct: 420 QIDVMSCTTLLFGYVKGGHMDDALDLFHMMQKRTVVTYNVMISGL---FHQGKITE-AYK 475

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
           +F+  P  D V W+ ++AGL+ N L  EA  F+K+M  + + P++   ++++S  +  S 
Sbjct: 476 LFNESPTRDSVTWSCLVAGLATNGLIHEALQFYKKMLLSNIRPSESVVSSLISCLSNYSM 535

Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
              G+Q HA   K G  + + + ++LI +YCKCG++  A+  FD+M  ++ VTWN +IHG
Sbjct: 536 MVHGQQFHATTIKIGLDSHLLIQNSLISLYCKCGEMIIAQSIFDLMAKRDKVTWNTIIHG 595

Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           YA N  G  AV +++ M  + V PDDITF+ +L+AC+H  L++     FN+M   +G+ P
Sbjct: 596 YALNNLGQNAVEMFESMTKAQVDPDDITFLGVLSACNHMSLLEEAKYFFNAMTCTYGILP 655

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
            + HY CM+D   R     EAE L+  MP + D  IW  LLS CRL  N +LA+ AA +L
Sbjct: 656 NIMHYACMVDLFCRKCMIKEAEGLVKSMPFEPDSAIWTSLLSGCRLTGNDKLAEHAASQL 715

Query: 701 FRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
             +DP    PY  L +++    +   + ++R  +      KD  YS
Sbjct: 716 IAIDPCTKMPYLHLISVHGLTNKSTVIDSLRSQIKSTATEKDVGYS 761



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 208/440 (47%), Gaps = 45/440 (10%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ +H   +++G   D  L   L+ +Y K  +   A+  FDKM    + SWNA+L    
Sbjct: 282 GGRCIHGLAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYI 341

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            SD ++ A KLFD M  R+ +SWN++I+  + +G    A  +Y+KM+ +           
Sbjct: 342 YSDKIDEARKLFDSMNNRDKISWNSMINGYINDGRIADATELYSKMTEKS---------- 391

Query: 126 VFKASTALLD--VEHGRRCHGLVIKIGLDK-NIYVANALLSLYAKCGWTKHAVPVFEEMS 182
             +A+TAL+   +++G       +   + + ++     LL  Y K G    A+ +F  M 
Sbjct: 392 -LEAATALMSWFIDNGMLDKARDMFYNMPQIDVMSCTTLLFGYVKGGHMDDALDLFHMMQ 450

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           +   VT+  M+SGL    ++ EA ++F     ++ + DSV+ S ++   A  G   E+  
Sbjct: 451 KRTVVTYNVMISGLFHQGKITEAYKLF----NESPTRDSVTWSCLVAGLATNGLIHEALQ 506

Query: 243 FAQSD-------------------NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
           F +                     + +S  VHGQQ H  TIK+G ++ L + NSL+ +Y 
Sbjct: 507 FYKKMLLSNIRPSESVVSSLISCLSNYSMMVHGQQFHATTIKIGLDSHLLIQNSLISLYC 566

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K G+M  A+ IF  + +R  V+WN +I GY        A+E+ + M     +PD++T + 
Sbjct: 567 KCGEMIIAQSIFDLMAKRDKVTWNTIIHGYALNNLGQNAVEMFESMTKAQVDPDDITFLG 626

Query: 344 MLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           +L AC     ++  +  F++M       P++  +  M+  + +    KEA  L + M F 
Sbjct: 627 VLSACNHMSLLEEAKYFFNAMTCTYGILPNIMHYACMVDLFCRKCMIKEAEGLVKSMPF- 685

Query: 399 GVKPDRTTLAIILSSCAAMG 418
             +PD      +LS C   G
Sbjct: 686 --EPDSAIWTSLLSGCRLTG 703



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 149/325 (45%), Gaps = 28/325 (8%)

Query: 1   KKAHVAGKLLHAHILRNGLFD------------DTFLCNRLIELYSKCNNTHSAQHLFDK 48
           +K+  A   L +  + NG+ D            D   C  L+  Y K  +   A  LF  
Sbjct: 389 EKSLEAATALMSWFIDNGMLDKARDMFYNMPQIDVMSCTTLLFGYVKGGHMDDALDLFHM 448

Query: 49  MPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY 108
           M  + + ++N ++S       +  AYKLF+E P R+ V+W+ L++ L  NGL  +AL  Y
Sbjct: 449 MQKRTVVTYNVMISGLFHQGKITEAYKLFNESPTRDSVTWSCLVAGLATNGLIHEALQFY 508

Query: 109 NKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC 168
            KM      P+   ++S+    +    + HG++ H   IKIGLD ++ + N+L+SLY KC
Sbjct: 509 KKMLLSNIRPSESVVSSLISCLSNYSMMVHGQQFHATTIKIGLDSHLLIQNSLISLYCKC 568

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           G    A  +F+ M++ ++VT+  ++ G A  +    A+EMF  M +  V  D ++   VL
Sbjct: 569 GEMIIAQSIFDLMAKRDKVTWNTIIHGYALNNLGQNAVEMFESMTKAQVDPDDITFLGVL 628

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
             C       E+  F                + +T   G   ++     ++D++ +   +
Sbjct: 629 SACNHMSLLEEAKYF---------------FNAMTCTYGILPNIMHYACMVDLFCRKCMI 673

Query: 289 DSAEVIFSNLP-ERSVVSWNVMIAG 312
             AE +  ++P E     W  +++G
Sbjct: 674 KEAEGLVKSMPFEPDSAIWTSLLSG 698



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 114/506 (22%), Positives = 206/506 (40%), Gaps = 80/506 (15%)

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
           +N L+  + + G +++A  +F  +P R VVSWN ++A   +     +A+     M+  GF
Sbjct: 38  NNRLMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGF 97

Query: 335 EPDEVTSINMLVACVRSGDIKTGR----EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
            PD  +    L AC R   ++ GR     +F S  S +V    ++++ Y+        + 
Sbjct: 98  RPDHTSFSTALSACARLEALEMGRCVHGLVFKSCSSGNVFVGASLITMYANC-----GVV 152

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIY 449
              E    GV+     L   L S    G++ + +  +A        + N V+ + +I  +
Sbjct: 153 SCLEQVLDGVESPNVALWNALIS----GLVMNHRVGYARKAFDRMPVRNVVSWTAMIKGH 208

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
                 ++A ++F  +P  + V W  MI G   +    EA   F  +  N    T     
Sbjct: 209 FTAHEVDMAFQLFKLMPVKNSVSWCVMIGGFVTHEKFSEAVELFNSLMMNGEEVTNVILV 268

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK----------------- 552
            ++++ A + S   GR +H    K G+  D+ + ++L+ MYCK                 
Sbjct: 269 KIVNAFAGMKSIRGGRCIHGLAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGN 328

Query: 553 ---------CGDIYG-----ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY---- 594
                    CG IY      AR+ FD M+ ++ ++WN MI+GY  +G   +A  LY    
Sbjct: 329 HVGSWNAMLCGYIYSDKIDEARKLFDSMNNRDKISWNSMINGYINDGRIADATELYSKMT 388

Query: 595 -----------------------KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
                                  +DM  +  + D ++   +L      G +D  +++F+ 
Sbjct: 389 EKSLEAATALMSWFIDNGMLDKARDMFYNMPQIDVMSCTTLLFGYVKGGHMDDALDLFHM 448

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           MQ     +  +  Y  MI  L   G   EA  L +E P +D  V W  L++    +  + 
Sbjct: 449 MQ-----KRTVVTYNVMISGLFHQGKITEAYKLFNESPTRDS-VTWSCLVAGLATNGLIH 502

Query: 692 LAKRAAEELF--RLDPKNSAPYSLLA 715
            A +  +++    + P  S   SL++
Sbjct: 503 EALQFYKKMLLSNIRPSESVVSSLIS 528


>gi|57899214|dbj|BAD87363.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|222619954|gb|EEE56086.1| hypothetical protein OsJ_04925 [Oryza sativa Japonica Group]
          Length = 566

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 187/527 (35%), Positives = 285/527 (54%), Gaps = 39/527 (7%)

Query: 258 QVHCLTIKLGFEADLHLSNS-LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           Q H    KLGF A    +N+ LL  Y ++  +  A+ +F  +P R+ V+WN +I G+ Q 
Sbjct: 32  QCHAAATKLGFSASNPFANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQS 91

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------------- 357
                A+    RM   G  P   +  ++LVACVR  +   G                   
Sbjct: 92  TAPDLAVAAFARMVRAGVSPTASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVG 151

Query: 358 ----------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                           +++F  M   +V+++ A+++ +  S    +A+ L REM+  GV 
Sbjct: 152 TALVDMYAKCRRLGAAQQVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVA 211

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P+  T + +LSS A+   ++ GKQVH A LK     D +V S L+ +YSKC   E   +V
Sbjct: 212 PNLMTYSSLLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKV 271

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
              +   D V +NS+I+GLS      EAF  F +MR++      F+FA++L +    SS 
Sbjct: 272 QMSVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSL 331

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
            +GRQVH  I K GY + + V ++LI MY + G I  +   F  M   N V+WN ++ G 
Sbjct: 332 LEGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGC 391

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG--VE 639
           AQ+G+G E V +++ M    V+PD ITF+++LTACSH GLVD G+E FN M+ D G  V 
Sbjct: 392 AQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMK-DKGYLVG 450

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
               HY CM+D LGRAG+ +EAE LI+ MP K    ++  LLS+C++H N+ +A R ++ 
Sbjct: 451 ARTKHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIAIRVSKR 510

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L  L+P +S+ +  L+N ++  GRW +   +RE MS   IVK+P++S
Sbjct: 511 LMELNPHDSSVHVQLSNAFAGDGRWGNAAEIRETMSGKGIVKEPSWS 557



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 205/422 (48%), Gaps = 56/422 (13%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG +LH+  LR G F    +   L+++Y+KC    +AQ                      
Sbjct: 131 AGAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQ---------------------- 168

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                    ++F EM E+NV ++  L++  V +     A+ +  +M   G  P  +T +S
Sbjct: 169 ---------QVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPNLMTYSS 219

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  +  +  D++HG++ H  V+K GL+ + +V +AL+++Y+KCG  +  V V   +S  +
Sbjct: 220 LLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQD 279

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +V+F +++SGL+   R  EA + F  M R    +D  + +S+L     +  G  S +   
Sbjct: 280 QVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASIL-----KAIGSSSSL--- 331

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                   + G+QVH L +K+G+++ + + NSL+ MYA++G +  +  +F ++   ++VS
Sbjct: 332 --------LEGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVS 383

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN +++G  Q     + +E+ ++M+    +PD +T +++L AC   G +  G E F+ M 
Sbjct: 384 WNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMK 443

Query: 366 ------SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
                       +  M+    ++    EA  L   M    +KP  +    +LS+C   G 
Sbjct: 444 DKGYLVGARTKHYACMVDLLGRAGYLNEAEYLINGMP---IKPGASVYRALLSACQIHGN 500

Query: 420 LE 421
           LE
Sbjct: 501 LE 502



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 196/404 (48%), Gaps = 51/404 (12%)

Query: 55  YSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
           ++  A+L+  C+S  L  A  LFD+MP R  V+WN LI    ++   + A++ + +M   
Sbjct: 48  FANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQSTAPDLAVAAFARMVRA 107

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
           G  PT  +++SV  A   L +   G   H + ++ G   ++ V  AL+ +YAKC     A
Sbjct: 108 GVSPTASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAA 167

Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
             VF EM E N  TFTA+++G   + R  +A+ + R M R  V+ + ++ SS+L      
Sbjct: 168 QQVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPNLMTYSSLL------ 221

Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
                   FA  ++      HG+QVHC  +K G E D  + ++L+ MY+K G  +    +
Sbjct: 222 ------SSFASPEDI----DHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKV 271

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
             ++  +  VS+N +I+G     +  +A +    M+  G + D  T  ++L A   S  +
Sbjct: 272 QMSVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSL 331

Query: 355 KTGRE-----------------------------------MFDSMPSPSVSSWNAMLSSY 379
             GR+                                   +F SM +P++ SWN+++S  
Sbjct: 332 LEGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGC 391

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           +Q  + KE +++F +M+   V+PD  T   +L++C+ +G+++ G
Sbjct: 392 AQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKG 435



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 228/525 (43%), Gaps = 86/525 (16%)

Query: 141 RCHGLVIKIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           +CH    K+G    N +   ALL+ Y +    + A  +F++M     VT+  ++ G A++
Sbjct: 32  QCHAAATKLGFSASNPFANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQS 91

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR-EGCGVESDVFAQSDNKFSRNVHGQQ 258
                A+  F  M+R  VS  + S+SSVL  C R E  G                  G  
Sbjct: 92  TAPDLAVAAFARMVRAGVSPTASSVSSVLVACVRLENAGA-----------------GAM 134

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +H + ++ GF A + +  +L+DMYAK   + +A+ +F  + E++V ++  ++ G+    +
Sbjct: 135 LHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQQVFGEMEEKNVATFTALVTGFVLSRR 194

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------------------ 360
              A+ L++ M+  G  P+ +T  ++L +     DI  G+++                  
Sbjct: 195 PHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSA 254

Query: 361 FDSMPSP------------SVS-----SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
             +M S             SVS     S+N+++S  S     KEA + F EM+  G   D
Sbjct: 255 LVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMD 314

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             T A IL +  +   L  G+QVH   LK        V + LI +Y++      +  VF 
Sbjct: 315 VFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESNGVFI 374

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            +   ++V WNS+++G + +    E    F+QMR+  + P   +F +VL++C+ +    +
Sbjct: 375 SMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDK 434

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           G +    ++  GY                   + GAR          T  +  M+    +
Sbjct: 435 GLEYFNLMKDKGY-------------------LVGAR----------TKHYACMVDLLGR 465

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            GY +EA  L   M    +KP    + A+L+AC   G +++ + +
Sbjct: 466 AGYLNEAEYLINGM---PIKPGASVYRALLSACQIHGNLEIAIRV 507


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 220/790 (27%), Positives = 369/790 (46%), Gaps = 109/790 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  I++ GL  +  L N L+++YSKC +                            
Sbjct: 43  GRQLHRQIVKQGLARNDLLGNYLVQMYSKCRS---------------------------- 74

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV---PTHITL 123
              L+ A   F  +  R + +WN LI+A            +Y +M  E      P  +T+
Sbjct: 75  ---LDDANAAFSALRSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNRLTI 128

Query: 124 ASVFKA------STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
            +V  A      S++       R  H  +    L+++++VA ALL  Y KCG  + A+ V
Sbjct: 129 IAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEV 188

Query: 178 FEEMSEPNEVTFTAMMSGLAKTD-RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           F  +  P+ + + A +   A  D R   AL + R M  + +  +  S  ++L  C     
Sbjct: 189 FSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGD--- 245

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                    S    +R++H +       +LGF  D+ ++ +L+ MY + G +D +  +F 
Sbjct: 246 --------HSSLPLARSIHAR-----VEELGFLGDVVVATALVTMYGRCGSVDESIAVFE 292

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML----------- 345
            +  R+ VSWN MIA + Q    + A  +  RM+  GF P+++T +  L           
Sbjct: 293 AMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDL 352

Query: 346 ---------VACV-----------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
                    +AC                   +G I   R  FD++P+ ++ SWNAML++Y
Sbjct: 353 GESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAY 412

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI-D 438
             +   +EA++LF  M+ + + P++ +   +L  C     +   + +HA  +       +
Sbjct: 413 GDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQE 469

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
           + +A+G++ ++++    E A   F      D V WN+ +A LS       A   F  M+ 
Sbjct: 470 SSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQH 529

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV-NDIFVGSALIEMYCKCGD-I 556
               P +F+  +V+  CA L +   GR +  Q+     V  D+ V SA++ M  KCG  +
Sbjct: 530 EGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSV 589

Query: 557 YGARQFFDMMHG--KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA-SGVKPDDITFVAIL 613
               + F  M    K+ V WN MI  YAQ+G+G +A++L++ M   S V+PD  TFV++L
Sbjct: 590 DECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVL 649

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVE--PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           + CSH+GLV+ G+  F   +   G+E  P+ +HY C++D LGR G+  EAE  I +MP  
Sbjct: 650 SGCSHAGLVEDGIHCFFLAREVLGIEQQPV-EHYACLVDVLGRMGYLREAEDFIRKMPLP 708

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
            D V+W  LL +C  + ++   +RAA     L   +S  Y +L+NIY++ GRW+D   VR
Sbjct: 709 ADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVR 768

Query: 732 ELMSENCIVK 741
           E M+E  + K
Sbjct: 769 EDMAERRVKK 778



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 143/638 (22%), Positives = 273/638 (42%), Gaps = 59/638 (9%)

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           ++ ++P   TLA + +      D+  GR+ H  ++K GL +N  + N L+ +Y+KC    
Sbjct: 18  HDDYIPIE-TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLD 76

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A   F  +      T+  +++  +    V +     +L  R     + +++ +VLG  A
Sbjct: 77  DANAAFSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIA 136

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
                  S   AQ+          + VH        E DL ++ +LLD Y K G ++SA 
Sbjct: 137 SGDPSSSSSSRAQA----------RIVHDDIRGSDLERDLFVATALLDAYGKCGCVESAL 186

Query: 293 VIFSNLPERSVVSWNVMI-AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--- 348
            +FS +    ++ WN  I A  G   +  +A+ L++RM   G  P+  + + +L +C   
Sbjct: 187 EVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDH 246

Query: 349 --------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                            R G +     +F++M   +  SWNAM+
Sbjct: 247 SSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMI 306

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ--VHAASLKTA 434
           ++++Q  +   A  ++  MQ  G +P++ T    L +  +    + G+   +H       
Sbjct: 307 AAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAG 366

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
              D  V + L+ +Y      + A   F  IP  +IV WN+M+     N    EA   F 
Sbjct: 367 LEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFA 426

Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG-YVNDIFVGSALIEMYCKC 553
            M++  + P + S+  VL  C  +S   + R +HA++  +G +  +  + + ++ M+ + 
Sbjct: 427 AMKRQSLAPNKVSYLAVLGCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARS 483

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +  A   FD    K++V+WN  +   +       A+  +  M   G +PD  T V+++
Sbjct: 484 GSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVV 543

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG-HFHEAEMLIDEMP-CK 671
             C+  G +++G  I   +     VE  +   + +++ + + G    E E L   MP  +
Sbjct: 544 DVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDR 603

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
            D V W  ++++   H +     R A +LFR+  + S+
Sbjct: 604 KDLVAWNTMIAAYAQHGH----GRKALKLFRIMQQRSS 637


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 179/566 (31%), Positives = 301/566 (53%), Gaps = 56/566 (9%)

Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSL 278
           D  +L +VL VCARE                 R +  G+ VH   +KL  + +L L+N+L
Sbjct: 41  DVATLVTVLPVCARE-----------------REIGLGKGVHGWAVKLRLDKELVLNNAL 83

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG--FEP 336
           +DMY+K G + +A++IF     ++VVSWN M+ G+  +  +    ++L++M + G   + 
Sbjct: 84  MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 143

Query: 337 DEVTSINMLVAC-----------------------------------VRSGDIKTGREMF 361
           DEVT +N +  C                                    + G +   + +F
Sbjct: 144 DEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 203

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
             + S +V+SWNA++  ++QS + + ++    +M+  G+ PD  T+  +LS+C+ +  L 
Sbjct: 204 HGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLR 263

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            GK+VH   ++     D +V   ++ +Y  C      + +F  + +  +V WN++I G  
Sbjct: 264 LGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYL 323

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N     A   F+QM    +     S   V  +C+ L S   GR+ HA   K    +D F
Sbjct: 324 QNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAF 383

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           +  +LI+MY K G I  + + F+ +  K+T +WN MI GY  +G   EA++L+++M  +G
Sbjct: 384 IACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTG 443

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
             PDD+TF+ +LTAC+HSGL+  G+   + M+   G++P L HY C+ID LGRAG   +A
Sbjct: 444 HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKA 503

Query: 662 -EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
             ++ +EM  + D  IW+ LLSSCR+H N+ + ++ A +LF L+P+    Y LL+N+Y+ 
Sbjct: 504 LRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAG 563

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
           LG+W+D+R VR+ M+E  + KD   S
Sbjct: 564 LGKWEDVRKVRQRMNEMSLRKDAGCS 589



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 221/474 (46%), Gaps = 57/474 (12%)

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNE----GFVPTHITLASVFKASTALLDVEH 138
           RN VSWN++I     NG  E++  +  +M  E     F+P   TL +V        ++  
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           G+  HG  +K+ LDK + + NAL+ +Y+KCG   +A  +F+  +  N V++  M+ G + 
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 199 TDRVVEALEMFRLMIRKA--VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
                   ++ R M+     V  D V++ + + VC  E        F  S          
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES-------FLPSL--------- 164

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +++HC ++K  F  +  ++N+ +  YAK G +  A+ +F  +  ++V SWN +I G+ Q 
Sbjct: 165 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 224

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----------------- 359
                +++   +MK  G  PD  T  ++L AC +   ++ G+E                 
Sbjct: 225 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 284

Query: 360 ------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                             +FD+M   S+ SWN +++ Y Q+     A+ +FR+M   G++
Sbjct: 285 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 344

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
               ++  +  +C+ +  L  G++ HA +LK     D ++A  LI +Y+K      + +V
Sbjct: 345 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 404

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
           F+ + E     WN+MI G  ++ L  EA   F++M++    P   +F  VL++C
Sbjct: 405 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 458



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 208/441 (47%), Gaps = 30/441 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           NA +++  K   L +A ++F  +  + V SWN LI    ++     +L  + +M   G +
Sbjct: 184 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 243

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   T+ S+  A + L  +  G+  HG +I+  L+++++V  ++LSLY  CG       +
Sbjct: 244 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 303

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+ M + + V++  +++G  +      AL +FR M+   + +  +S+  V G C+     
Sbjct: 304 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL---- 359

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                             G++ H   +K   E D  ++ SL+DMYAKNG +  +  +F+ 
Sbjct: 360 ------------LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNG 407

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           L E+S  SWN MI GYG    + +AI+L + M+  G  PD++T + +L AC  SG I  G
Sbjct: 408 LKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 467

Query: 358 REMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
               D M S     P++  +  ++    ++    +A+++  E      + D      +LS
Sbjct: 468 LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE--EADVGIWKSLLS 525

Query: 413 SCAAMGILESGKQVHAASLK-TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
           SC     LE G++V A   +      +NYV   L  +Y+   + E   +V  R+ E+ + 
Sbjct: 526 SCRIHQNLEMGEKVAAKLFELEPEKPENYVL--LSNLYAGLGKWEDVRKVRQRMNEMSL- 582

Query: 472 CWNSMIAGLSLNSLDIEAFMF 492
                 AG S   L+ + F F
Sbjct: 583 ---RKDAGCSWIELNRKVFSF 600



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 193/457 (42%), Gaps = 90/457 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   ++  L  +  L N L+++YSKC    +AQ +F    +K++ SWN ++     
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKA--LSVYNKMS---NEGFVPTHI 121
             D    + +  +M               +  G + KA  +++ N +    +E F+P+  
Sbjct: 121 EGDTHGTFDVLRQM---------------LAGGEDVKADEVTILNAVPVCFHESFLPSL- 164

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
                             +  H   +K     N  VANA ++ YAKCG   +A  VF  +
Sbjct: 165 ------------------KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 206

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
                 ++ A++ G A+++    +L+    M    +  DS ++ S+L  C+         
Sbjct: 207 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS--------- 257

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                  K      G++VH   I+   E DL +  S+L +Y   G++ + + +F  + ++
Sbjct: 258 -------KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 310

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM-----KSCG----------------------- 333
           S+VSWN +I GY Q     +A+ + ++M     + CG                       
Sbjct: 311 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 370

Query: 334 -------FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
                   E D   + +++    ++G I    ++F+ +   S +SWNAM+  Y      K
Sbjct: 371 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 430

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           EAIKLF EMQ  G  PD  T   +L++C   G++  G
Sbjct: 431 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 467



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 154/356 (43%), Gaps = 33/356 (9%)

Query: 11  HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQH----LFDKMPHKDIYSWNAILSAQCK 66
           H  +  +GL  D+F    L+   SK  +    +     +      +D++ + ++LS    
Sbjct: 234 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 293

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             +L     LFD M ++++VSWN +I+  ++NG  ++AL V+ +M   G     I++  V
Sbjct: 294 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 353

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F A + L  +  GR  H   +K  L+ + ++A +L+ +YAK G    +  VF  + E + 
Sbjct: 354 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 413

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
            ++ AM+ G        EA+++F  M R   + D ++   VL  C   G   E      Q
Sbjct: 414 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ 473

Query: 246 SDNKFSRNVHGQQVHCLTIKLGF-----------------EADLHLSNSLLDMYAKNGDM 288
             + F    + +   C+   LG                  EAD+ +  SLL     + ++
Sbjct: 474 MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNL 533

Query: 289 DSAEVIFSNL-------PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           +  E + + L       PE  V+  N + AG G K++  + +   QRM       D
Sbjct: 534 EMGEKVAAKLFELEPEKPENYVLLSN-LYAGLG-KWEDVRKVR--QRMNEMSLRKD 585


>gi|297796091|ref|XP_002865930.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311765|gb|EFH42189.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 878

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 211/773 (27%), Positives = 361/773 (46%), Gaps = 88/773 (11%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +++ GL ++  LCN L+ LY K +                   WNA       
Sbjct: 41  GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGI-----------------WNA------- 76

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   KLFDEMP+R V +W  +ISA  ++     ALS++ +M   G  P   T +SV
Sbjct: 77  -------RKLFDEMPQRTVFAWTVMISAFTKSQEFASALSLFEEMMASGIHPNEFTFSSV 129

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            ++   L D+ +G R HG V+K G + N  V ++L  LY+KCG  K A  +F  +   + 
Sbjct: 130 IRSCAGLGDLSYGGRVHGSVLKTGFEGNSVVGSSLTDLYSKCGKLKEARELFSSLQNADT 189

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++T M+S L    +  EAL  +  MI+  V  +  +   +LG  A    G+E       
Sbjct: 190 ISWTMMISSLVGARKWSEALRFYSEMIKAGVPPNEFTFVKLLG--ASSFLGLE------- 240

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ +H   I  G   ++ L  SL+  Y+    M+ A  + ++  E+ V  W
Sbjct: 241 --------FGKTIHSSIIVRGIPLNVVLKTSLVYFYSHFSIMEDAVRVLNSTGEQDVFLW 292

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--VRSGD---------IK 355
             +++G+ +  ++ +A+     M+S G  P+  T   +L  C  VRS D         IK
Sbjct: 293 TSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAILSLCSAVRSLDLGKQIHSQTIK 352

Query: 356 TGRE-------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
            G E                         +F +M SP+V SW  ++         ++   
Sbjct: 353 VGFEDSTDVGNALVSMYMKCSASEVEASRVFGAMISPNVVSWTTLILGLVDHGFEQDCFG 412

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN--YVASGLIGI 448
           L  EM  R V+P+  TL+ +L +C+ +  L    ++H   L+   H+D    V + L+  
Sbjct: 413 LLMEMVKREVEPNFVTLSGVLRACSKLKYLRLVLEIHGYLLR--RHVDGEMIVGNSLVDA 470

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+   + + A  V   +   D + + S++   +       A      M  + +   Q S 
Sbjct: 471 YASSGKVDYAWNVTRSMDMRDNITYTSLVTRFNELGKHEMALSVINHMYGDGIRMDQLSL 530

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
              +S+ A L +   G+ +H    K G+   + V ++L++MY KCG +  A++ F+ +  
Sbjct: 531 PGFISASANLGAHETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDAKKVFEEIAM 590

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
            + V+WN ++ G A  G    A+  +++M   G +PD +TF+ +L+ACS   L ++G+E 
Sbjct: 591 PDVVSWNGLVSGLASIGRISSALSAFEEMRMKGTEPDSVTFLILLSACSKGRLTEMGLEY 650

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           F SM+  H +EP ++HY  ++  LGRAG   EA  +++ M  K + +I++ LL +CR H 
Sbjct: 651 FQSMKTIHNMEPQIEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYHG 710

Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           N+ L +  A +   L P + A Y LLA++Y   G+ +  +  R LMSE  + K
Sbjct: 711 NLSLGEDMANKGLALAPSDPAFYILLADLYDESGKPELAQKTRNLMSEKGLCK 763



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           AH  GK LH + +++G      + N L+++YSKC +   A+ +F+++   D+ SWN ++S
Sbjct: 542 AHETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDAKKVFEEIAMPDVVSWNGLVS 601

Query: 63  AQCKSDDLEFAYKLFDEM----PERNVVSWNNLISALVRNGLEEKALSVYNKM 111
                  +  A   F+EM     E + V++  L+SA  +  L E  L  +  M
Sbjct: 602 GLASIGRISSALSAFEEMRMKGTEPDSVTFLILLSACSKGRLTEMGLEYFQSM 654


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 165/448 (36%), Positives = 265/448 (59%), Gaps = 3/448 (0%)

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
           PER++ S  +    Y +K +  +AI     ++S  FE D V    +L    + G ++  +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIH--AHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
           ++FD MP+  + SW  ++S YSQS    EA+ LF +M   G +P+  TL+ +L +     
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
               G+Q+HA SLK    ++ +V S L+ +Y++      A+ +F+ +   ++V WN++IA
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G +           F QM +    PT F++++V ++CA   S  QG+ VHA + K G   
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
             ++G+ LI+MY K G I  A++ F  +  ++ V+WN +I GYAQ+G G EA++L++ M+
Sbjct: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
            + V+P++ITF+++LTACSHSGL+D G   F  M+  H +E  + H+  ++D LGRAG  
Sbjct: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRL 459

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
           +EA   I+EMP K    +W  LL SCR+H N+ L   AAE++F LDP +S P+ LL+NIY
Sbjct: 460 NEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 519

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +S GR  D   VR++M E+ + K+PA S
Sbjct: 520 ASAGRLSDAAKVRKMMKESGVKKEPACS 547



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 199/412 (48%), Gaps = 54/412 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HAHI  +   DD  L N ++ +Y+KC +   AQ LFDKMP KD+ SW         
Sbjct: 124 GRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTV------- 176

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LIS   ++G   +AL+++ KM + GF P   TL+S+
Sbjct: 177 ------------------------LISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSL 212

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KAS       HGR+ H   +K G D N++V ++LL +YA+    + A  +F  ++  N 
Sbjct: 213 LKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNV 272

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+++G A+       + +F  M+R+       + SSV   CA  G   +       
Sbjct: 273 VSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQ------- 325

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ VH   IK G +   ++ N+L+DMYAK+G +  A+ +F  L ++ +VSW
Sbjct: 326 ---------GKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSW 376

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           N +I+GY Q     +A++L ++M     +P+E+T +++L AC  SG +  G+  F+ M  
Sbjct: 377 NSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK 436

Query: 367 PSVSSWNA----MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
             + +  A    ++    ++    EA K   EM    +KP       +L SC
Sbjct: 437 HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMP---IKPTAAVWGALLGSC 485



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 172/342 (50%), Gaps = 51/342 (14%)

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P     + +    T L  ++ GR  H  +     + ++ + N +L++YAKCG  + A  +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F++M   + V++T ++SG +++ +  EAL +F  M+      +  +LSS+L      G G
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA---SGTG 219

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                   SD+      HG+Q+H  ++K G++ ++H+ +SLLDMYA+   M  A+VIF++
Sbjct: 220 -------PSDH------HGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNS 266

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
           L  ++VVSWN +IAG+ +K +    + L  +M   GFEP   T  ++  AC         
Sbjct: 267 LAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQG 326

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      +SG IK  +++F  +    + SWN+++S Y+Q 
Sbjct: 327 KWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQH 386

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
               EA++LF +M    V+P+  T   +L++C+  G+L+ G+
Sbjct: 387 GLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQ 428



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 176/342 (51%), Gaps = 5/342 (1%)

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           ++P+RT  + +L+ C  +  L+ G+ +HA    +    D  + + ++ +Y+KC   E A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            +F ++P  D+V W  +I+G S +    EA   F +M      P +F+ +++L +     
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S   GRQ+HA   K GY  ++ VGS+L++MY +   +  A+  F+ +  KN V+WN +I 
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G+A+ G G+  +RL+  M+  G +P   T+ ++ TAC+ SG ++ G  + ++  +  G +
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWV-HAHVIKSGGQ 339

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           PI      +ID   ++G   +A+ +   +  K D V W  ++S    H     A +  E+
Sbjct: 340 PIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLFEQ 398

Query: 700 LF--RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           +   ++ P      S+L     S G  D+ +   ELM ++ I
Sbjct: 399 MLKAKVQPNEITFLSVLTACSHS-GLLDEGQYYFELMKKHKI 439


>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
          Length = 603

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 170/532 (31%), Positives = 287/532 (53%), Gaps = 41/532 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN-LPERSVVSWNVMIAGYG 314
           G+Q+H L I  GF        SL++MY+K G M  A ++F +   ER+V ++N +I+G+ 
Sbjct: 30  GKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAIISGFV 89

Query: 315 QKYQSTKAIELLQRMKSCGFEPD------------EVTSINMLVACV------------- 349
               ++K  +  ++M+  G  PD            EV  +  +  C+             
Sbjct: 90  SNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKKIHGCLLKMGLELDVFVGS 149

Query: 350 -------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                  ++G ++  +++F  +    V  WNAM++ Y++     EA+++FR M  +GV P
Sbjct: 150 ALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAP 209

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
            R T+  ILS  A+ G L++GK VH   +K        V++ LI +Y KC+    A  +F
Sbjct: 210 SRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIF 269

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
             I E DI  WNS+I+              F +M  + + P   +  TVL +C+ L++  
Sbjct: 270 EMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALM 329

Query: 523 QGRQVHAQI--------EKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
            GR++H  +        +++G V+++ V +A+++MY KCG +  A + FD M  K+  +W
Sbjct: 330 HGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASW 389

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI GY  +GY  EA+ ++  M  +  KP+++T V +L+AC+H+G V  G      M+ 
Sbjct: 390 NIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMES 449

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
             GV P ++HYTC+ID LGRAGH  +A  ++ +MP + +PV+W  LL +CRLH N  LA+
Sbjct: 450 TFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAE 509

Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AA ++ +L+P++   Y L++N+Y  +GR++++  VR+ M E  + K P  S
Sbjct: 510 IAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCS 561



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 228/525 (43%), Gaps = 98/525 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH+ ++  G          LI +YSKC     A  +F                    
Sbjct: 30  GKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF-------------------- 69

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                     +D   ERNV ++N +IS  V NGL  K    Y KM  EG +P   T   V
Sbjct: 70  ----------YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCV 119

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +    +++V   ++ HG ++K+GL+ +++V +AL++ Y K G  + A  VF E+S  + 
Sbjct: 120 VRTCCEVMEV---KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDV 176

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + AM++G AK   + EALE+FR M  K V+    +++ +L V A  G           
Sbjct: 177 VLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRG---------DL 227

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           DN       G+ VH + +K+G+++ + +SN+L+DMY K   +  A +IF  + E+ + SW
Sbjct: 228 DN-------GKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSW 280

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------- 359
           N +I+ + Q       + L  +M   G  PD VT   +L AC     +  GRE       
Sbjct: 281 NSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMII 340

Query: 360 ------------------------------------MFDSMPSPSVSSWNAMLSSYSQSE 383
                                               +FDSM    V+SWN M+  Y    
Sbjct: 341 NGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHG 400

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA---ASLKTASHIDNY 440
              EA+ +F +M     KP+  TL  +LS+C   G +  G+   A   ++      I++Y
Sbjct: 401 YALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHY 460

Query: 441 VASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS 484
               +I +  +    E A  +  ++P + + V W +++    L+ 
Sbjct: 461 TC--VIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHG 503



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 221/500 (44%), Gaps = 70/500 (14%)

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF-EEMSEPNEVTFTAMM 193
           ++  G++ H L+I  G   +     +L+++Y+KCG    A+ VF +   E N   + A++
Sbjct: 26  NLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAII 85

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           SG        +  + ++ M  + V  D  +   V+  C    C V             + 
Sbjct: 86  SGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTC----CEVME----------VKK 131

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
           +HG    CL +K+G E D+ + ++L++ Y KNG M+ A+ +F  L  R VV WN MI GY
Sbjct: 132 IHG----CL-LKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGY 186

Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE-------------- 359
            +     +A+E+ +RM   G  P   T   +L      GD+  G+               
Sbjct: 187 AKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGV 246

Query: 360 ---------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                                +F+ +    + SWN+++S + Q  +H   ++LF +M   
Sbjct: 247 SVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGS 306

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA-------SHIDN-YVASGLIGIYS 450
           G+ PD  T+  +L +C+ +  L  G+++H   +            +DN  V++ ++ +Y+
Sbjct: 307 GILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYA 366

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC     A ++F  + + D+  WN MI G  ++   +EA   F QM + E  P + +   
Sbjct: 367 KCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVG 426

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           VLS+C        GR   AQ+E   G +  I   + +I+M  + G +  A +    M  +
Sbjct: 427 VLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQ 486

Query: 570 -NTVTWNEM-----IHGYAQ 583
            N V W  +     +HG A+
Sbjct: 487 ANPVVWRALLGACRLHGNAE 506



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 218/434 (50%), Gaps = 39/434 (8%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D++  +A+++   K+  +E A K+F E+  R+VV WN +I+   + G  ++AL V+ +M 
Sbjct: 144 DVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMH 203

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
            +G  P+  T+  +     +  D+++G+  HG+V+K+G D  + V+NAL+ +Y KC    
Sbjct: 204 VKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIG 263

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A+ +FE ++E +  ++ +++S   +       L +F  M+   +  D V++++VL  C+
Sbjct: 264 DALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACS 323

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD--------LHLSNSLLDMYAK 284
                             +  +HG+++H   I  G   D        L +SN+++DMYAK
Sbjct: 324 H----------------LAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAK 367

Query: 285 NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
            G M++A  IF ++ ++ V SWN+MI GYG    + +A+ +  +M    F+P+EVT + +
Sbjct: 368 CGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGV 427

Query: 345 LVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           L AC  +G +  GR     M S     P++  +  ++    ++ + ++A ++ ++M    
Sbjct: 428 LSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMP--- 484

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLK-TASHIDNYV----ASGLIGIYSKCQ- 453
           ++ +      +L +C   G  E  +      L+    H  +YV      G+IG Y +   
Sbjct: 485 IQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLE 544

Query: 454 -RNELAERVFHRIP 466
            R  + E+   + P
Sbjct: 545 VRKTMKEQNVKKTP 558



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 143/279 (51%), Gaps = 6/279 (2%)

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH- 463
           T     L SCA    L  GKQ+H+  +           + LI +YSKC +   A  VF+ 
Sbjct: 12  TKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYD 71

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
              E ++  +N++I+G   N L  + F F+K+MR   + P +++F  V+ +C ++    +
Sbjct: 72  PCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEV---ME 128

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
            +++H  + K G   D+FVGSAL+  Y K G +  A++ F  +  ++ V WN MI+GYA+
Sbjct: 129 VKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAK 188

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
            G  DEA+ +++ M   GV P   T   IL+  +  G +D G +  + + +  G +  + 
Sbjct: 189 IGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNG-KTVHGIVMKMGYDSGVS 247

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
               +ID  G+  H  +A ++I EM  + D   W  ++S
Sbjct: 248 VSNALIDMYGKCKHIGDA-LIIFEMINEKDIFSWNSIIS 285


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 177/491 (36%), Positives = 279/491 (56%), Gaps = 32/491 (6%)

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
           L  E D    N +L  Y +NG ++ A  +F++  E  V+SWN +++GY Q  + ++A EL
Sbjct: 31  LAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEAREL 90

Query: 326 LQRMKSCGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
             RM        +V S N++V+   R GD+   R +FD+ P   V +W A++S Y+Q+  
Sbjct: 91  FDRMPG-----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGM 145

Query: 385 HKEAIKLFREMQFRGVKPDRTTLA--IILSSCAAMGILESGKQV-------HAASLKTAS 435
            +EA ++F  M      P+R  ++   ++++     +++  K++       + AS  T  
Sbjct: 146 LEEARRVFDAM------PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTM- 198

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
            +  Y  +G++         E A+ VF  +P+ D V W +M+A  S      E    F +
Sbjct: 199 -LTGYAQAGML---------EEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIE 248

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M +   +  + +FA VLS+CA +++   G Q+H ++ + GY    FVG+AL+ MY KCG+
Sbjct: 249 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGN 308

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +  AR  F+ M  ++ V+WN MI GYA++G+G EA+ ++  M  +  KPDDIT V +L A
Sbjct: 309 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 368

Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
           CSHSGLV+ G+  F SM  D GV    +HYTCMID LGRAG   EA  L+ +MP + D  
Sbjct: 369 CSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDST 428

Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMS 735
           +W  LL + R+H N  L + AAE++F L+P+N+  Y LL+NIY+S G+W D R +R +M 
Sbjct: 429 MWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMME 488

Query: 736 ENCIVKDPAYS 746
           E  + K P +S
Sbjct: 489 ERGVKKVPGFS 499



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 195/406 (48%), Gaps = 37/406 (9%)

Query: 18  GLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEF 72
           GLF+     D    N L+  Y +      A+ LFD+MP +D+ SWN ++S   +  D+  
Sbjct: 58  GLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVE 117

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A +LFD  P R+V +W  ++S   +NG+ E+A  V++ M     V  +  +A+  +    
Sbjct: 118 ARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRM- 176

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
              ++  +    ++      +N+   N +L+ YA+ G  + A  VF+ M + + V++ AM
Sbjct: 177 ---MDEAKELFNMMPC----RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAM 229

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           ++  ++     E L++F  M R    ++  + + VL  CA        D+ A        
Sbjct: 230 LAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCA--------DIAALE------ 275

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
              G Q+H   I+ G+     + N+LL MY K G+M+ A   F  + ER VVSWN MIAG
Sbjct: 276 --CGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAG 333

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-----PSP 367
           Y +     +A+E+   M++   +PD++T + +L AC  SG ++ G   F SM      + 
Sbjct: 334 YARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTA 393

Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
               +  M+    ++    EA  L ++M F   +PD T    +L +
Sbjct: 394 KPEHYTCMIDLLGRAGRLAEAHDLMKDMPF---EPDSTMWGALLGA 436



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 7/123 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH  ++R G     F+ N L+ +Y KC N   A++ F++M  +D+ SWN +++   +
Sbjct: 277 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR 336

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFV---PT 119
               + A ++FD M   +     ++   +++A   +GL EK +S +  M ++  V   P 
Sbjct: 337 HGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPE 396

Query: 120 HIT 122
           H T
Sbjct: 397 HYT 399



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 42/230 (18%)

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
           V D    + +I  +   G +  AR +FD+   K+ V+WN M+  Y +NG  +EA  L+  
Sbjct: 3   VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN- 61

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD--HYTCMIDCLGR 654
              S  + D I++ A+++     G +    E+F+ M       P  D   +  M+    R
Sbjct: 62  ---SRTEWDVISWNALMSGYVQWGKMSEARELFDRM-------PGRDVVSWNIMVSGYAR 111

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA------------------ 696
            G   EA  L D  P + D   W  ++S    +  +  A+R                   
Sbjct: 112 RGDMVEARRLFDAAPVR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAA 170

Query: 697 ---------AEELFRLDP-KNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
                    A+ELF + P +N A ++ +   Y+  G  ++ +AV + M +
Sbjct: 171 YIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQ 220


>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
 gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
          Length = 531

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 170/529 (32%), Positives = 279/529 (52%), Gaps = 63/529 (11%)

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
           MY K G ++ A  +F  +  R  VSW  MI+ Y       +A++L Q+M + G +PD +T
Sbjct: 1   MYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSIT 60

Query: 341 SINMLVACV-------------------------------RSGDIKTGREMFDSMPSPSV 369
             + L+AC                                R GD+ + R+ F+ + +  V
Sbjct: 61  FTSALLACTKLADGKAIHARIVSSNMESDFVGSALINMYARCGDVSSARQAFEKIQNKHV 120

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH-- 427
             W +++++Y Q+ +++EA+ L+  M   GV  D  T    L +CA++G L+ GK +H  
Sbjct: 121 VCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHLR 180

Query: 428 ---------------------AASLKTASHIDNYVAS------GLIGIYSKCQRNELAER 460
                                   L  A  + N +AS       L+ +Y+KC   ELA+ 
Sbjct: 181 VSECGFQSLVVHTALLTMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGSLELAKS 240

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSS 520
            F      D+V WN+MI   + + L  EA   ++ M    + P + + A+ LS+CA +S 
Sbjct: 241 AFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACA-ISG 299

Query: 521 SFQ-GRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           S Q GR++H+++ K+  + + + V +AL+ MY +CG +  AR  F+ M  ++ ++W  M 
Sbjct: 300 SLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMT 359

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
             YAQ G+ D+ + LY +M+  G++P++ITF +IL  CSH+GL+  GVE F  MQ +H V
Sbjct: 360 SVYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEV 419

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
            PI +H+ CM+D LGR+G   +AE L++ MP + D V W  +L SC+ H++   AKRAA 
Sbjct: 420 VPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAAR 479

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            +  LDP+N++ YSLL++I+++ G   +   V+  M E  + K P  SL
Sbjct: 480 RVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSL 528



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 191/424 (45%), Gaps = 87/424 (20%)

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   +E A K+FD +  R+ VSW ++IS+   NG  ++AL +Y +M  +G  P  IT  S
Sbjct: 4   KCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTS 63

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A T L D   G+  H  ++   ++ + +V +AL+++YA+CG    A   FE++   +
Sbjct: 64  ALLACTKLAD---GKAIHARIVSSNMESD-FVGSALINMYARCGDVSSARQAFEKIQNKH 119

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +T++M+   +T    EAL+++  M  + V  D V+  + LG CA  G   E      
Sbjct: 120 VVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKE------ 173

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP------ 299
                     G+ +H    + GF++ L +  +LL MYAK G++D+A  +F+ L       
Sbjct: 174 ----------GKAIHLRVSECGFQS-LVVHTALLTMYAKCGELDAARAVFNRLASNVAVQ 222

Query: 300 ------------------------ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
                                    + +VSWN MI  Y Q     +A++L Q M S G  
Sbjct: 223 NALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVL 282

Query: 336 PDEVTSINMLVACVRSGDIKTGRE------------------------------------ 359
           PDEVT  + L AC  SG ++ GRE                                    
Sbjct: 283 PDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARS 342

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           MF+ M    V SW AM S Y+Q  +  + + L+ EM   G++P+  T   IL  C+  G+
Sbjct: 343 MFEDMGQRDVLSWTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGL 402

Query: 420 LESG 423
           L  G
Sbjct: 403 LARG 406



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 196/442 (44%), Gaps = 84/442 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA I+ + +  D F+ + LI +Y++C +  SA+  F+K+ +K              
Sbjct: 74  GKAIHARIVSSNMESD-FVGSALINMYARCGDVSSARQAFEKIQNK-------------- 118

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                            +VV W +L++A V+ G   +AL +Y +M +EG     +T  + 
Sbjct: 119 -----------------HVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTA 161

Query: 127 FKASTALLDVEHGRRCHGLVIKIG-----------------------------LDKNIYV 157
             A  +L  ++ G+  H  V + G                             L  N+ V
Sbjct: 162 LGACASLGALKEGKAIHLRVSECGFQSLVVHTALLTMYAKCGELDAARAVFNRLASNVAV 221

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
            NAL+++YAKCG  + A   FE     + V++ AM+   A+     EAL++++ M  + V
Sbjct: 222 QNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGV 281

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
             D V+++S L  CA  G             +  R +H + +        F++ L +  +
Sbjct: 282 LPDEVTIASSLSACAISG-----------SLQLGREIHSRVLK----NQSFQSSLMVQTA 326

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L++MY + G +++A  +F ++ +R V+SW  M + Y Q+  + + ++L   M   G  P+
Sbjct: 327 LVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLDLYLEMVLHGIRPN 386

Query: 338 EVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLF 392
           E+T  ++LV C  +G +  G E F  M S     P    +  M+    +S   ++A  L 
Sbjct: 387 EITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALV 446

Query: 393 REMQFRGVKPDRTTLAIILSSC 414
             M +   +PD      +L SC
Sbjct: 447 ESMPY---QPDSVAWLTVLGSC 465



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/541 (21%), Positives = 235/541 (43%), Gaps = 96/541 (17%)

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y KCG  + A  VF+ +   + V++T+M+S  A      EAL++++ M    +  DS++
Sbjct: 1   MYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSIT 60

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
            +S L  C                   ++   G+ +H   +    E+D  + ++L++MYA
Sbjct: 61  FTSALLAC-------------------TKLADGKAIHARIVSSNMESDF-VGSALINMYA 100

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           + GD+ SA   F  +  + VV W  ++  Y Q     +A++L  RM   G   D VT + 
Sbjct: 101 RCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVT 160

Query: 344 MLVACVRSGDIKTG----------------------------------REMFDSMPSPSV 369
            L AC   G +K G                                  R +F+ + S +V
Sbjct: 161 ALGACASLGALKEGKAIHLRVSECGFQSLVVHTALLTMYAKCGELDAARAVFNRLAS-NV 219

Query: 370 SSWNAMLSSY-------------------------------SQSENHKEAIKLFREMQFR 398
           +  NA+++ Y                               +Q    +EA+ L++ M  +
Sbjct: 220 AVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQ 279

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNEL 457
           GV PD  T+A  LS+CA  G L+ G+++H+  LK  S   +  V + L+ +Y +C R E 
Sbjct: 280 GVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLET 339

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A  +F  + + D++ W +M +  +      +    + +M  + + P + +F ++L  C+ 
Sbjct: 340 ARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSH 399

Query: 518 LSSSFQGRQVHAQIEKDGYVNDI---FVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVT 573
                +G +   +++ +  V  I   F+   ++++  + G +  A    + M +  ++V 
Sbjct: 400 AGLLARGVECFLEMQSEHEVVPIREHFL--CMVDLLGRSGRLRDAEALVESMPYQPDSVA 457

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC-SHSGLVDVGVEIFNSM 632
           W  ++     +   D A R  + +    + P++ +  ++L++  + +GL    +E+  SM
Sbjct: 458 WLTVLGSCKTHSDADTAKRAARRV--KELDPENTSLYSLLSSIFTAAGLPQEALEVQLSM 515

Query: 633 Q 633
           +
Sbjct: 516 K 516


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 196/626 (31%), Positives = 319/626 (50%), Gaps = 52/626 (8%)

Query: 157 VANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
           V + L  LY  C     A  +F+E+  P+ + +  ++   A       A++++  M+   
Sbjct: 45  VLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLG 104

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           V  +  +   VL  C        S + A  D        G ++H      G E+D+ +  
Sbjct: 105 VRPNKYTYPFVLKAC--------SGLLAIED--------GVEIHSHAKMFGLESDVFVCT 148

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+D YAK G +  A+ +FS++  R VV+WN MIAG         A++L+ +M+  G  P
Sbjct: 149 ALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICP 208

Query: 337 DEVTSINMLVA----------------CVR-SGD----IKTG--------------REMF 361
           +  T + +L                  CVR S D    + TG              R++F
Sbjct: 209 NSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIF 268

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGIL 420
           D M   +  SW+AM+  Y  S+  KEA++LF +M  +  + P   TL  +L +CA +  L
Sbjct: 269 DVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDL 328

Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
             G+++H   +K    +D  + + L+ +Y+KC   + A R F  +   D V ++++++G 
Sbjct: 329 SRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGC 388

Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
             N     A   F+ M+ + + P   +   VL +C+ L++   G   H  +   G+  D 
Sbjct: 389 VQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDT 448

Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
            + +ALI+MY KCG I  AR+ F+ M   + V+WN MI GY  +G G EA+ L+ D++A 
Sbjct: 449 LICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLAL 508

Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
           G+KPDDITF+ +L++CSHSGLV  G   F++M  D  + P ++H  CM+D LGRAG   E
Sbjct: 509 GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDE 568

Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           A   I  MP + D  IW  LLS+CR+H N+ L +  ++++  L P+++  + LL+NIYS+
Sbjct: 569 AHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSA 628

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYS 746
            GRWDD   +R    +  + K P  S
Sbjct: 629 AGRWDDAAHIRITQKDWGLKKIPGCS 654



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 174/668 (26%), Positives = 285/668 (42%), Gaps = 116/668 (17%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K+    K +H H L+N    D+ + ++L  LY  CN                        
Sbjct: 22  KSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQ----------------------- 58

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                   +  A +LFDE+P  +V+ WN +I A   NG  + A+ +Y+ M + G  P   
Sbjct: 59  --------VVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKY 110

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T   V KA + LL +E G   H      GL+ +++V  AL+  YAKCG    A  +F  M
Sbjct: 111 TYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSM 170

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S  + V + AM++G +      +A+++   M  + +  +S   S+++GV    G   E+ 
Sbjct: 171 SHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNS---STIVGVLPTVG---EAK 224

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                        HG+ +H   ++  F+  + +   LLDMYAK   +  A  IF  +  R
Sbjct: 225 ALG----------HGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR 274

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           + VSW+ MI GY       +A+EL  +M      +P  VT  ++L AC +  D+  GR++
Sbjct: 275 NEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKL 334

Query: 361 -----------------------------------FDSMPSPSVSSWNAMLSSYSQSENH 385
                                              FD M      S++A++S   Q+ N 
Sbjct: 335 HCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNA 394

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
             A+ +FR MQ  G+ PD TT+  +L +C+ +  L+ G   H   +      D  + + L
Sbjct: 395 AVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNAL 454

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +YSKC +   A  VF+R+   DIV WN+MI G  ++ L +EA   F  +    + P  
Sbjct: 455 IDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDD 514

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +F  +LSSC+      +GR     + +D      F     +E +C C            
Sbjct: 515 ITFICLLSSCSHSGLVMEGRLWFDAMSRD------FSIVPRME-HCIC------------ 555

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
                      M+    + G  DEA    ++M     +PD   + A+L+AC     +++G
Sbjct: 556 -----------MVDILGRAGLIDEAHHFIRNM---PFEPDVRIWSALLSACRIHKNIELG 601

Query: 626 VEIFNSMQ 633
            E+   +Q
Sbjct: 602 EEVSKKIQ 609



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 148/327 (45%), Gaps = 9/327 (2%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +L +C     L   K++H   LK  S+ D+ V   L  +Y  C +  LA R+F  IP   
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           ++ WN +I   + N     A   +  M    + P ++++  VL +C+ L +   G ++H+
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
             +  G  +D+FV +AL++ Y KCG +  A++ F  M  ++ V WN MI G +  G  D+
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN---SMQLDHGVEPILDHYT 646
           AV+L   M   G+ P+  T V +L     +  +  G  +         D+GV       T
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV----GT 249

Query: 647 CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPK 706
            ++D   +      A  + D M  +++ V W  ++        ++ A    +++   D  
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNE-VSWSAMIGGYVXSDCMKEALELFDQMILKDAM 308

Query: 707 NSAPYSLLANIYSSLGRWDDLRAVREL 733
           +  P + L ++  +  +  DL   R+L
Sbjct: 309 DPTPVT-LGSVLRACAKLTDLSRGRKL 334



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 5/206 (2%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++  +L +C +  S  + +++H    K+    D  V   L  +Y  C  +  AR+ FD +
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
              + + WN++I  YA NG  D A+ LY  M+  GV+P+  T+  +L ACS    ++ GV
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
           EI +  ++  G+E  +   T ++D   + G   EA+ L   M  + D V W  +++ C L
Sbjct: 130 EIHSHAKM-FGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSL 187

Query: 687 HANVRLAKRAAEELFRLDPKNSAPYS 712
           +    L   A + + ++  +   P S
Sbjct: 188 YG---LCDDAVQLIMQMQEEGICPNS 210


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 183/564 (32%), Positives = 292/564 (51%), Gaps = 74/564 (13%)

Query: 257 QQVHCLTIKLGFEAD-LHLSNSLLDMYAK-NGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
            Q+H  TIK G  ++ L L+  ++    K +GD+  A  +F  +P+ SV  WN MI GY 
Sbjct: 52  NQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYS 111

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG----------------- 357
           +   S   + L + M     +PD  T   +L    +   +K G                 
Sbjct: 112 RINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNL 171

Query: 358 -------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                              R++FD      V +WN +LS Y++ + ++E+ +LF EM+ +
Sbjct: 172 FVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKK 231

Query: 399 G--VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV-ASGLIGIYSKCQ-- 453
              V P+  TL ++LS+C+ +  L  GK ++   +K      N +  + LI +++ C   
Sbjct: 232 CECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEM 291

Query: 454 -----------------------------RNELAERVFHRIPELDIVCWNSMIAG-LSLN 483
                                        R +LA + F ++PE D V W +MI G L +N
Sbjct: 292 DAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMN 351

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               E    F+ M+ + + P +F+  ++L++CA L +   G      I+K+   ND F+G
Sbjct: 352 RFK-EVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIG 410

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           +ALI+MY KCG++  A++ F+ M  K+  TW  MI G A NG+G+EA+ ++  M+ + V 
Sbjct: 411 NALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVT 470

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           PD+IT++ ++ AC+H GLV  G   F++M + HG++P L HY CM+D LGRAGH  EA  
Sbjct: 471 PDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALE 530

Query: 664 LIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGR 723
           +I  MP K + ++W  LL +CR+H NV+LA+ AA E+  L+P+N A Y LL NIY++  +
Sbjct: 531 VIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKK 590

Query: 724 WDDLRAVRELMSENCIVKDPAYSL 747
           W +L  VR++M E  I K P  SL
Sbjct: 591 WKNLHNVRKMMMERGIKKIPGCSL 614



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 145/560 (25%), Positives = 252/560 (45%), Gaps = 63/560 (11%)

Query: 26  CNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK-SDDLEFAYKLFDEMPERN 84
           CN + E+    N  HS Q +   +    ++    I+    K S D+ +A K+FDE+P+ +
Sbjct: 45  CNTMYEI----NQIHS-QTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPS 99

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR-RCH 143
           V  WN +I    R    E  +S+Y  M      P   T   + K  T  + +++G+   +
Sbjct: 100 VFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLN 159

Query: 144 GLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVV 203
             VI   LD N++V    + L++ CG   +A  +F+       VT+  ++SG  +  R  
Sbjct: 160 HAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYE 219

Query: 204 EALEMFRLMIRKA--VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
           E+  +F  M +K   VS +SV+L  +L  C+                K    V G+ ++ 
Sbjct: 220 ESKRLFIEMEKKCECVSPNSVTLVLMLSACS----------------KLKDLVGGKCIYN 263

Query: 262 LTIKLGF-EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
             IK G  E +L L N+L+DM+A  G+MD+A  +F  +  R V+SW  ++ G+       
Sbjct: 264 KYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFAN----- 318

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
                     +C                     I   R+ FD MP     SW AM+  Y 
Sbjct: 319 ----------TC--------------------RIDLARKYFDQMPERDYVSWTAMIDGYL 348

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
           +    KE + LFR+MQ   VKPD  T+  IL++CA +G LE G+       K     D +
Sbjct: 349 RMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTF 408

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           + + LI +Y KC   E A+++F+ + + D   W +MI GL+ N    EA   F  M +  
Sbjct: 409 IGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEAS 468

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE-KDGYVNDIFVGSALIEMYCKCGDIYGA 559
           + P + ++  V+ +C  +    +G+   + +  + G   ++     ++++  + G +  A
Sbjct: 469 VTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEA 528

Query: 560 RQ-FFDMMHGKNTVTWNEMI 578
            +   +M    N++ W  ++
Sbjct: 529 LEVIMNMPVKPNSIVWGSLL 548



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/404 (23%), Positives = 198/404 (49%), Gaps = 29/404 (7%)

Query: 5   VAGKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
           V GK ++   ++ G+ + +  L N LI++++ C    +A+ +FD+M  +D+ SW +I++ 
Sbjct: 256 VGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTG 315

Query: 64  QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
              +  ++ A K FD+MPER+ VSW  +I   +R    ++ L+++  M      P   T+
Sbjct: 316 FANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTM 375

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
            S+  A   L  +E G      + K  +  + ++ NAL+ +Y KCG  + A  +F EM +
Sbjct: 376 VSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQK 435

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            ++ T+TAM+ GLA      EAL MF  M+  +V+ D ++   V+  C   G      + 
Sbjct: 436 KDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVG------LV 489

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER-S 302
           A+  + FS          + ++ G + +L     ++D+  + G +  A  +  N+P + +
Sbjct: 490 AKGKHFFSN---------MAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPN 540

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE----VTSINMLVACVRSGDIKTGR 358
            + W  ++ G  + +++ +  E+    +    EP+     V   N+  AC +  ++   R
Sbjct: 541 SIVWGSLL-GACRVHKNVQLAEMAAN-EILELEPENGAVYVLLCNIYAACKKWKNLHNVR 598

Query: 359 EM-----FDSMPSPSVSSWNAMLSSY-SQSENHKEAIKLFREMQ 396
           +M        +P  S+   N ++  + +  ++H ++ +++ +++
Sbjct: 599 KMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLE 642



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 126/548 (22%), Positives = 224/548 (40%), Gaps = 109/548 (19%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK+L  H + +G  D + F+    I L+S C   + A+ +FD     ++ +WN +LS   
Sbjct: 154 GKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYN 213

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           +    E + +LF EM ++                              E   P  +TL  
Sbjct: 214 RFKRYEESKRLFIEMEKK-----------------------------CECVSPNSVTLVL 244

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCG--------------- 169
           +  A + L D+  G+  +   IK G+ + N+ + NAL+ ++A CG               
Sbjct: 245 MLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTR 304

Query: 170 ----WTK------------HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
               WT              A   F++M E + V++TAM+ G  + +R  E L +FR M 
Sbjct: 305 DVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQ 364

Query: 214 RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
              V  D  ++ S+L  CA  G  +E                G+       K   + D  
Sbjct: 365 MSNVKPDEFTMVSILTACAHLG-ALEL---------------GEWAKTYIDKNKIKNDTF 408

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG 333
           + N+L+DMY K G+++ A+ IF+ + ++   +W  MI G        +A+ +   M    
Sbjct: 409 IGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEAS 468

Query: 334 FEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEA 388
             PDE+T I ++ AC   G +  G+  F +M       P+++ +  M+    ++ + KEA
Sbjct: 469 VTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEA 528

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG---- 444
           +++   M    VKP+      +L +C         K V  A +     ++    +G    
Sbjct: 529 LEVIMNMP---VKPNSIVWGSLLGACRV------HKNVQLAEMAANEILELEPENGAVYV 579

Query: 445 -LIGIYSKCQ--------RNELAERVFHRIPELDIVCWNSM----IAGLSLNSLDIEAFM 491
            L  IY+ C+        R  + ER   +IP   ++  N +    +AG   +    E + 
Sbjct: 580 LLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYA 639

Query: 492 FFKQMRQN 499
             + M+Q+
Sbjct: 640 KLENMKQD 647



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 154/334 (46%), Gaps = 13/334 (3%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL--AERVFHRIPE 467
           +L +C  M  +    Q+H+ ++KT    ++   + +I      +  ++  A +VF  IP+
Sbjct: 41  LLETCNTMYEIN---QIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQ 97

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
             +  WN+MI G S  +        +K M  + + P  F+F  +L    K  +   G+ +
Sbjct: 98  PSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVL 157

Query: 528 HAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGY 586
                  G+++ ++FV    I ++  CG +  AR+ FDM  G   VTWN ++ GY +   
Sbjct: 158 LNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKR 217

Query: 587 GDEAVRLYKDM--IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
            +E+ RL+ +M      V P+ +T V +L+ACS    +  G  I+N    +  VEP L  
Sbjct: 218 YEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLIL 277

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
              +ID     G    A  + DEM  + D + W  +++       + LA++  ++   + 
Sbjct: 278 ENALIDMFASCGEMDAARGVFDEMKTR-DVISWTSIVTGFANTCRIDLARKYFDQ---MP 333

Query: 705 PKNSAPYSLLANIYSSLGRWDD-LRAVRELMSEN 737
            ++   ++ + + Y  + R+ + L   R++   N
Sbjct: 334 ERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSN 367



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 9/214 (4%)

Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV-NDIFVGSALIEM 549
           +F K+M  N   P      + +S     ++ ++  Q+H+Q  K G   N +F+   +I  
Sbjct: 20  LFLKRMISNT--PLHSFVKSPISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVII-- 75

Query: 550 YC---KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           +C   + GD+Y AR+ FD +   +   WN MI GY++    +  V LYK M+   +KPD 
Sbjct: 76  FCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDG 135

Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
            TF  +L   +    +  G  + N   +   ++  L      I      G  + A  + D
Sbjct: 136 FTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFD 195

Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
            M    + V W V+LS          +KR   E+
Sbjct: 196 -MGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEM 228


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 176/525 (33%), Positives = 265/525 (50%), Gaps = 66/525 (12%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           + +H   +  G   D  +++SLL  Y + G   +A  +F  +PE++VV W+ +IAGY  +
Sbjct: 37  RALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSAR 96

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
             +  A  LL++M+S G EP+ +T                               WN ++
Sbjct: 97  GDAEAAWGLLEQMRSAGVEPNVIT-------------------------------WNGLV 125

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           S  ++S    +A+     M   G  PD T ++  LS+   +  +  GKQVH   +K    
Sbjct: 126 SGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCR 185

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS------------ 484
           +D  V + LI +Y KC R +   RVFH    +D+   N+++AGLS N+            
Sbjct: 186 LDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREF 245

Query: 485 -----------------------LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
                                   D+EA   F+ M+   + P   +   VL + A +++ 
Sbjct: 246 ICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAAL 305

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
             GR  H    + G+++D++VGSAL++MY KCG    AR  FD M  +N V+WN MI GY
Sbjct: 306 MHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGY 365

Query: 582 AQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           A +G    AV+L+  M     KPD +TF  +L ACS +GL + G   FN MQ  HG+ P 
Sbjct: 366 AMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPR 425

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
           ++HY CM+  LGR+G   EA  LI+EMP + D  IW  LL SCR++ NV LA+ AAE+LF
Sbjct: 426 MEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLF 485

Query: 702 RLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +L+P N+  Y LL+NIY+S   WD +  VR+ M    + K+   S
Sbjct: 486 QLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCS 530



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 142/444 (31%), Positives = 230/444 (51%), Gaps = 31/444 (6%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A    + LHA  + +GL +D F+ + L+  Y +   T +A+ +FD+MP K++  W+A+++
Sbjct: 32  AQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIA 91

Query: 63  AQCKSDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
                 D E A+ L ++M     E NV++WN L+S L R+G    A++   +M +EGF P
Sbjct: 92  GYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFP 151

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
               ++    A   + +V  G++ HG V+K G   +  V  AL+ +Y KCG     V VF
Sbjct: 152 DATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVF 211

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            E S  +  +  A+++GL++  +V EAL +FR  I + V ++ VS +S++  C + G  +
Sbjct: 212 HESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDL 271

Query: 239 ES-DVF--AQSDNKFSRNV----------------HGQQVHCLTIKLGFEADLHLSNSLL 279
           E+ D+F   QS      +V                HG+  HC +++ GF  D+++ ++L+
Sbjct: 272 EAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALV 331

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
           DMYAK G    A  IF  +P R+VVSWN MI GY     +  A++L   M+ C  +PD V
Sbjct: 332 DMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLV 391

Query: 340 TSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           T   +L AC ++G  + GR  F+ M      SP +  +  M++   +S    EA  L  E
Sbjct: 392 TFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINE 451

Query: 395 MQFRGVKPDRTTLAIILSSCAAMG 418
           M F   +PD      +L SC   G
Sbjct: 452 MPF---EPDSCIWGSLLGSCRVYG 472



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 161/332 (48%), Gaps = 23/332 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H ++++ G   D  +   LI++Y KC        +F +  H D+ S NA+++   +
Sbjct: 172 GKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSR 231

Query: 67  SDDLEFAYKLFDEM----PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
           +  +  A  LF E      E NVVSW ++++  V+NG + +A+ ++  M + G  P  +T
Sbjct: 232 NAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVT 291

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           +  V  A   +  + HGR  H   ++ G   ++YV +AL+ +YAKCG  +HA  +F+ M 
Sbjct: 292 IPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMP 351

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             N V++ AM+ G A       A+++F  M +     D V+ + VLG C++ G       
Sbjct: 352 SRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAG------- 404

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
             +   ++   +  QQ H ++ ++   A       ++ +  ++G +D A  + + +P E 
Sbjct: 405 LTEEGRRYFNEM--QQGHGISPRMEHYA------CMVTLLGRSGKLDEAYDLINEMPFEP 456

Query: 302 SVVSWNVMIAG---YGQKYQSTKAIELLQRMK 330
               W  ++     YG    +  A E L +++
Sbjct: 457 DSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLE 488



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 39/285 (13%)

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           L+  ++     PD   L   L SC A  +    + +HAA++ +    D +VAS L+  Y 
Sbjct: 7   LYHFLRHVSFPPDPHLLPSALKSCPAQPL---ARALHAAAVVSGLAEDPFVASSLLHSYI 63

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR------------- 497
           +      A  VF R+PE ++V W+++IAG S       A+   +QMR             
Sbjct: 64  RLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNG 123

Query: 498 ----------------------QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
                                     +P     +  LS+   +     G+QVH  + K G
Sbjct: 124 LVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAG 183

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
              D  V +ALI+MY KCG      + F      +  + N ++ G ++N    EA+ L++
Sbjct: 184 CRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFR 243

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
           + I  GV+ + +++ +I+  C  +G     V++F +MQ   GVEP
Sbjct: 244 EFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQ-SIGVEP 287


>gi|356528072|ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 219/703 (31%), Positives = 337/703 (47%), Gaps = 115/703 (16%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N  +S   +S  L  A  LFD M  R+ V+WN++I+  V      +A  ++++M     V
Sbjct: 43  NKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDVV 102

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
             ++ ++  F    +   VE GRR                                   +
Sbjct: 103 SWNLIVSGYFSCRGSRF-VEEGRR-----------------------------------L 126

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSVSLSSVLGVCAREGC 236
           FE M + + V++  ++SG AK  R+ +AL++F  M  R AVS +++    + G       
Sbjct: 127 FELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNAL----ITGFLLNGDV 182

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF- 295
               D F      +S ++                     ++L+    +NG++D A  I  
Sbjct: 183 DSAVDFFRTMPEHYSTSL---------------------SALISGLVRNGELDMAAGILC 221

Query: 296 --SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE--------VTSINML 345
              N  +  V ++N +IAGYGQ+    +A  L   +     + DE        V S N +
Sbjct: 222 ECGNGDDDLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSM 281

Query: 346 VAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
           + C V++GDI + RE+FD M      SWN M+S Y Q  N +EA KLFREM      PD 
Sbjct: 282 MMCYVKAGDIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREMPI----PDV 337

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
            +  +I+S  A  G L                                    LA+  F R
Sbjct: 338 LSWNLIVSGFAQKGDLN-----------------------------------LAKDFFER 362

Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           +P  +++ WNS+IAG   N     A   F +M+     P + + ++V+S C  L + + G
Sbjct: 363 MPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPDRHTLSSVMSVCTGLVNLYLG 422

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH-GKNTVTWNEMIHGYAQ 583
           +Q+H  + K   + D  + ++LI MY +CG I  A   F+ +   K+ +TWN MI GYA 
Sbjct: 423 KQIHQLVTKI-VIPDSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYAS 481

Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
           +G   EA+ L+K M    + P  ITF++++ AC+H+GLV+ G   F SM  D+G+E  ++
Sbjct: 482 HGLAAEALELFKLMKRLKIHPTYITFISVMNACAHAGLVEEGRRQFKSMINDYGIERRVE 541

Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRL 703
           H+  ++D LGR G   EA  LI+ MP K D  +W  LLS+CR+H NV LA  AA+ L RL
Sbjct: 542 HFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLSACRVHNNVELALVAADALIRL 601

Query: 704 DPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +P++SAPY LL NIY++LG+WDD  +VR LM E  + K   YS
Sbjct: 602 EPESSAPYVLLYNIYANLGQWDDAESVRVLMEEKNVKKQAGYS 644



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 165/584 (28%), Positives = 275/584 (47%), Gaps = 79/584 (13%)

Query: 27  NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
           N+ I    +      A+ LFD M H+D  +WN++++      ++  A +LFDEMP R+VV
Sbjct: 43  NKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDVV 102

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           SWN ++S                     G+        S F        VE GRR   L+
Sbjct: 103 SWNLIVS---------------------GYFSCR---GSRF--------VEEGRRLFELM 130

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
            +    ++    N ++S YAK G    A+ +F  M E N V+  A+++G      V  A+
Sbjct: 131 PQ----RDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNALITGFLLNGDVDSAV 186

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREG-----------CGVESDVFAQSDNKFSRNVH 255
           + FR M        S SLS+++    R G           CG   D    + N      +
Sbjct: 187 DFFRTMPEHY----STSLSALISGLVRNGELDMAAGILCECGNGDDDLVHAYNTLIAG-Y 241

Query: 256 GQQVHCLTIKLGFEA-----------------DLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
           GQ+ H    +  F+                  ++   NS++  Y K GD+ SA  +F  +
Sbjct: 242 GQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSARELFDRM 301

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-VRSGDIKTG 357
            E+   SWN MI+GY Q     +A +L + M      PD V S N++V+   + GD+   
Sbjct: 302 VEQDTCSWNTMISGYVQISNMEEASKLFREMPI----PD-VLSWNLIVSGFAQKGDLNLA 356

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           ++ F+ MP  ++ SWN++++ Y ++E++K AI+LF  MQF G +PDR TL+ ++S C  +
Sbjct: 357 KDFFERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPDRHTLSSVMSVCTGL 416

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSM 476
             L  GKQ+H    K     D+ + + LI +YS+C     A  VF+ I    D++ WN+M
Sbjct: 417 VNLYLGKQIHQLVTKIVIP-DSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAM 475

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG-RQVHAQIEKDG 535
           I G + + L  EA   FK M++ +++PT  +F +V+++CA      +G RQ  + I   G
Sbjct: 476 IGGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHAGLVEEGRRQFKSMINDYG 535

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMI 578
               +   ++L+++  + G +  A    + M  K +   W  ++
Sbjct: 536 IERRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALL 579



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 149/296 (50%), Gaps = 18/296 (6%)

Query: 6   AGKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           AG ++ A  L + + + DT   N +I  Y + +N   A  LF +MP  D+ SWN I+S  
Sbjct: 288 AGDIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREMPIPDVLSWNLIVSGF 347

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            +  DL  A   F+ MP +N++SWN++I+   +N   + A+ ++++M  EG  P   TL+
Sbjct: 348 AQKGDLNLAKDFFERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPDRHTLS 407

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV    T L+++  G++ H LV KI +  +  + N+L+++Y++CG    A  VF E+   
Sbjct: 408 SVMSVCTGLVNLYLGKQIHQLVTKIVIPDSP-INNSLITMYSRCGAIVDACTVFNEIKLY 466

Query: 185 NEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            +V T+ AM+ G A      EALE+F+LM R  +    ++  SV+  CA  G   E    
Sbjct: 467 KDVITWNAMIGGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHAGLVEEGR-- 524

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                        +Q   +    G E  +    SL+D+  + G +  A  + + +P
Sbjct: 525 -------------RQFKSMINDYGIERRVEHFASLVDILGRQGQLQEAMDLINTMP 567



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/467 (23%), Positives = 199/467 (42%), Gaps = 93/467 (19%)

Query: 19  LFD-----DTFLCNRLIELYSKCNNTH---SAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
           LFD     D    N ++  Y  C  +      + LF+ MP +D  SWN ++S   K+  +
Sbjct: 92  LFDEMPRRDVVSWNLIVSGYFSCRGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRM 151

Query: 71  EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH--ITLASVFK 128
           + A KLF+ MPERN VS N LI+  + NG  + A+  +  M      P H   +L+++  
Sbjct: 152 DQALKLFNAMPERNAVSSNALITGFLLNGDVDSAVDFFRTM------PEHYSTSLSALIS 205

Query: 129 A--STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP-- 184
                  LD+  G  C       G D  ++  N L++ Y + G  + A  +F+ + +   
Sbjct: 206 GLVRNGELDMAAGILCE---CGNGDDDLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRG 262

Query: 185 -----------NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
                      N V++ +MM    K   +V A E+F  M+ +     +  +S  + +   
Sbjct: 263 DGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSARELFDRMVEQDTCSWNTMISGYVQISNM 322

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
           E     S +F +                + I      D+   N ++  +A+ GD++ A+ 
Sbjct: 323 EEA---SKLFRE----------------MPI-----PDVLSWNLIVSGFAQKGDLNLAKD 358

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
            F  +P ++++SWN +IAGY +      AI+L  RM+  G  PD  T  +++  C    +
Sbjct: 359 FFERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPDRHTLSSVMSVCTGLVN 418

Query: 354 IKTGREMFDSMP------SP-----------------------------SVSSWNAMLSS 378
           +  G+++   +       SP                              V +WNAM+  
Sbjct: 419 LYLGKQIHQLVTKIVIPDSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGG 478

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           Y+      EA++LF+ M+   + P   T   ++++CA  G++E G++
Sbjct: 479 YASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHAGLVEEGRR 525



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 213/484 (44%), Gaps = 62/484 (12%)

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
           T K    + L+ SN  +    ++G +  A  +F ++  R  V+WN MI GY  + +  +A
Sbjct: 30  THKYNNSSPLNRSNKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARA 89

Query: 323 IELLQRMKSCGFEPDEVTSINMLV----ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
            +L   M        +V S N++V    +C  S  ++ GR +F+ MP     SWN ++S 
Sbjct: 90  RQLFDEMPR-----RDVVSWNLIVSGYFSCRGSRFVEEGRRLFELMPQRDCVSWNTVISG 144

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL--------------------SSCAAM- 417
           Y+++    +A+KLF  M  R        +   L                    +S +A+ 
Sbjct: 145 YAKNGRMDQALKLFNAMPERNAVSSNALITGFLLNGDVDSAVDFFRTMPEHYSTSLSALI 204

Query: 418 -GILESGKQVHAASL--KTASHIDNYVAS--GLIGIYSKCQRNELAERVFHRIPE----- 467
            G++ +G+   AA +  +  +  D+ V +   LI  Y +    E A R+F  IP+     
Sbjct: 205 SGLVRNGELDMAAGILCECGNGDDDLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDG 264

Query: 468 --------LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
                    ++V WNSM+         + A   F +M + +      S+ T++S   ++S
Sbjct: 265 DEGQRRFRRNVVSWNSMMMCYVKAGDIVSARELFDRMVEQD----TCSWNTMISGYVQIS 320

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +  +  ++  ++     + D+   + ++  + + GD+  A+ FF+ M  KN ++WN +I 
Sbjct: 321 NMEEASKLFREMP----IPDVLSWNLIVSGFAQKGDLNLAKDFFERMPLKNLISWNSIIA 376

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GY +N     A++L+  M   G +PD  T  ++++ C  +GLV++ +       +   V 
Sbjct: 377 GYEKNEDYKGAIQLFSRMQFEGERPDRHTLSSVMSVC--TGLVNLYLGKQIHQLVTKIVI 434

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P       +I    R G   +A  + +E+    D + W  ++     H    LA  A  E
Sbjct: 435 PDSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASHG---LAAEAL-E 490

Query: 700 LFRL 703
           LF+L
Sbjct: 491 LFKL 494


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 199/651 (30%), Positives = 325/651 (49%), Gaps = 58/651 (8%)

Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
           HG+  H  +IK   +  +++ N  L+LY+K G   +A  +F+ MSE + +++  ++SG  
Sbjct: 27  HGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYG 86

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
                 +A+ +F       + +D  S + VL  C +             D    + +HG 
Sbjct: 87  GMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQ-----------IKDFALGKVIHGL 135

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
            + C     G    + L+N L+DMY K   +D A ++F +  E   VSWN +I GY +  
Sbjct: 136 AIVC-----GLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVG 190

Query: 318 QSTKAIELLQRM----------------KSC---------------------GFEPDEVT 340
              + ++LL +M                KSC                     G + D V 
Sbjct: 191 AYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVV 250

Query: 341 SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN-----HKEAIKLFREM 395
              +L    ++G +    ++F + P+ +V  +NAM++ + Q+E+       EA+KLF +M
Sbjct: 251 GTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQM 310

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
           Q +G+KP   T + I+  C  +   E GKQ+HA   K     D ++ S LI +YS     
Sbjct: 311 QRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGST 370

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
           E   + F+  P+LDIV W +MIAG + N     A   F ++  +   P +F   T+LS+C
Sbjct: 371 EDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSAC 430

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           A +++   G QVH    K G      V ++ I MY K G++  A+  F+ +   + V+W+
Sbjct: 431 ADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWS 490

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MI   AQ+G+  +A+ L++ M + G+ P+ ITF+ +LTACSH GLV+ G+  + SM+ D
Sbjct: 491 VMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKD 550

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           + ++  + H TC++D L RAG   +A+  I      D PV+W  LLS CR++ ++   K 
Sbjct: 551 YDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKH 610

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            AE+L  LDP+ S+ Y LL NIY+  G       +RELM +  I K+P  S
Sbjct: 611 VAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQS 661



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 267/570 (46%), Gaps = 68/570 (11%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A KLFD M ER+V+S+N LIS     G   KA+ ++++           + A V  A   
Sbjct: 63  AQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQ 122

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           + D   G+  HGL I  GL + +++ N L+ +Y KC    HA  +FE   E + V++ ++
Sbjct: 123 IKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSL 182

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           ++G A+     E L++   M    + +++ +L S L  C           +   +N  S 
Sbjct: 183 ITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSC-----------YLNLNNMVS- 230

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
             +G+ +H  T+K G + D+ +  +LLDMYAK G +  A  +F   P ++VV +N MIAG
Sbjct: 231 --YGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAG 288

Query: 313 YGQ-----KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------- 360
           + Q     K  + +A++L  +M+  G +P + T  +++  C      + G+++       
Sbjct: 289 FIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKH 348

Query: 361 ----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                       F+S P   + SW  M++ Y+Q+   + A+ LF
Sbjct: 349 NIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALF 408

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
            E+   G KPD   +  +LS+CA +    SG+QVH  ++KT       V +  I +Y+K 
Sbjct: 409 YELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKS 468

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              + A+  F  I   D+V W+ MI   + +    +A   F+ M+   ++P Q +F  VL
Sbjct: 469 GNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVL 528

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG--SALIEMYCKCGDIYGARQF-FDMMHGK 569
           ++C+      +G + +  ++KD Y   I V   + ++++  + G +  A+ F  +   G 
Sbjct: 529 TACSHGGLVEEGLRYYESMKKD-YDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGD 587

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           + V W  ++ G           R+YKD++ 
Sbjct: 588 HPVMWRTLLSG----------CRIYKDIVT 607



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 203/459 (44%), Gaps = 89/459 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H   +  GL    FL N LI++Y KC     A+ LF+     D  SWN+       
Sbjct: 129 GKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNS------- 181

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LI+   R G  E+ L +  KM + G      TL S 
Sbjct: 182 ------------------------LITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSA 217

Query: 127 FKASTALLD--VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
            K+    L+  V +G+  HG  +K GLD +I V  ALL +YAK G+   A+ +F      
Sbjct: 218 LKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQ 277

Query: 185 NEVTFTAMMSGLAKTDRV-----VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           N V + AM++G  +T+ +      EAL++F  M R+ +     + SS++ +C        
Sbjct: 278 NVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKIC-------- 329

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                   N      +G+Q+H    K   ++D  + ++L+++Y+  G  +     F++ P
Sbjct: 330 --------NHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTP 381

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------- 348
           +  +VSW  MIAGY Q  Q   A+ L   + + G +PDE     ML AC           
Sbjct: 382 KLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQ 441

Query: 349 ------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                    +SG++ + +  F+ + +P V SW+ M+ S +Q  +
Sbjct: 442 VHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGH 501

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            K+AI LF  M+  G+ P++ T   +L++C+  G++E G
Sbjct: 502 AKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEG 540



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 132/307 (42%), Gaps = 47/307 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HAHI ++ +  D F+ + LIELYS   +T      F+  P  DI SW         
Sbjct: 338 GKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTT------- 390

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I+   +NG  E AL+++ ++   G  P    + ++
Sbjct: 391 ------------------------MIAGYAQNGQFESALALFYELLASGKKPDEFIITTM 426

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   +     G + HG  +K G+     V N+ +S+YAK G    A   FEE+  P+ 
Sbjct: 427 LSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDV 486

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V+++ M+   A+     +A+ +F LM    +  + ++   VL  C+  G   E   + +S
Sbjct: 487 VSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYES 546

Query: 247 DNK-FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
             K +   ++ +   C+ + L     L  +  LLD  AKN  ++S    F + P    V 
Sbjct: 547 MKKDYDMKINVKHCTCI-VDL-----LSRAGRLLD--AKNFILNSG---FGDHP----VM 591

Query: 306 WNVMIAG 312
           W  +++G
Sbjct: 592 WRTLLSG 598



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 61/112 (54%)

Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           ++  ++   +K  SS  G+  HA + K  +   +F+ +  + +Y K G++  A++ FD M
Sbjct: 11  AYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRM 70

Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
             ++ +++N +I GY   G+  +A+ L+ +   + +K D  ++  +L+AC  
Sbjct: 71  SERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQ 122



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 4/116 (3%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A  +G+ +H + ++ G+     + N  I +Y+K  N  SA+  F+++ + D+ SW+ ++ 
Sbjct: 435 AERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMIC 494

Query: 63  AQCKSDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
           +  +    + A  LF+ M       N +++  +++A    GL E+ L  Y  M  +
Sbjct: 495 SNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKD 550


>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
 gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
          Length = 698

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 192/631 (30%), Positives = 315/631 (49%), Gaps = 59/631 (9%)

Query: 159 NALLSLYAKCG---WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
           N LL+ Y+  G       A  VF+E+  P+ V++ ++++         +A  + + M  +
Sbjct: 30  NQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHAR 89

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            ++  + +L S                  +S     R   G Q+    +K G   ++  +
Sbjct: 90  GLTASTFALGSA----------------LRSAAAARRPELGAQLQSFAVKSGLVDNVFSA 133

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           ++LLD+YAK G +  A  +F  +P R+ VSWN +IAGY +  +  +A+EL   M+     
Sbjct: 134 SALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELV 193

Query: 336 PDEVTSINML-----------------------------------VACVRSGDIKTGREM 360
           PD+ T   +L                                    A  + G     R +
Sbjct: 194 PDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRI 253

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF-REMQFRGVKPDRTTLAIILSSCAAMGI 419
           FD + S  + SWN+ML +Y+      EA++ F R M+  GV+PD  +   ++S C+  G 
Sbjct: 254 FDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGC 313

Query: 420 LE-SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN---ELAERVFHRIPELDIVCWNS 475
            +  G+ +H+  +K       +V + +I +Y++   N   E A + F  +   D V WNS
Sbjct: 314 DDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNS 373

Query: 476 MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
           M+ G S + L  +A  FF+ MR   +   +F+ +  L SC+ L+    GRQVH+ + + G
Sbjct: 374 MLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSG 433

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
           + ++ FV S+LI MY KCG +  AR+ F+     ++V WN M+ GYAQ+G       L+ 
Sbjct: 434 FSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFS 493

Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
           +M+   V  D +TFVA+LTA SH GLVD G EI NSM+  + +   ++HY C +D  GRA
Sbjct: 494 EMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLYGRA 553

Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLA 715
           G   +A+ LI+ MP + D ++W  LL +CR+H N+ LA   A  LF  +P+  + Y LL+
Sbjct: 554 GQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELASDVASHLFVAEPRQHSTYVLLS 613

Query: 716 NIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ++YS  G W D   V+++M    + K P +S
Sbjct: 614 SMYSGRGMWSDRATVQKVMKNRGLSKVPGWS 644



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 152/616 (24%), Positives = 266/616 (43%), Gaps = 94/616 (15%)

Query: 57  WNAILSAQCKS---DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           WN +L+A   S     L  A ++FDE+P  + VSWN+L++A V  G    A  +   M  
Sbjct: 29  WNQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHA 88

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
            G   +   L S  +++ A    E G +     +K GL  N++ A+ALL +YAKCG    
Sbjct: 89  RGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSD 148

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           A  VF+ M   N V++ A+++G A++ +  +A+E+F  M R  +  D  + +++L     
Sbjct: 149 ARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATV-- 206

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
           EG    S +              QQ+H    K G    L + N+ +  Y++ G    +  
Sbjct: 207 EGPSWYSLM--------------QQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRR 252

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR-MKSCGFEPDEVTSINMLVACVRSG 352
           IF  +  R ++SWN M+  Y       +A+    R M+  G +PD  +  +++  C   G
Sbjct: 253 IFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHG 312

Query: 353 -DIKTGREM--------------------------------------FDSMPSPSVSSWN 373
            D + GR +                                      FDS+      SWN
Sbjct: 313 CDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWN 372

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           +ML+ YS      +A++ FR M+   V  D   L+  L SC+ + +L  G+QVH+  +++
Sbjct: 373 SMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQS 432

Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
               +++V+S LI +YSKC     A + F    +   V WNSM+ G + +         F
Sbjct: 433 GFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLF 492

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
            +M  +++     +F  +L++ +      +G ++   +E    +         +E Y  C
Sbjct: 493 SEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKI------PLRMEHYA-C 545

Query: 554 G-DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
           G D+YG                        + G  D+A  L + M     +PD + ++ +
Sbjct: 546 GVDLYG------------------------RAGQLDKAKELIESM---PFQPDAMVWMTL 578

Query: 613 LTACSHSGLVDVGVEI 628
           L AC   G +++  ++
Sbjct: 579 LGACRIHGNMELASDV 594



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/544 (22%), Positives = 238/544 (43%), Gaps = 96/544 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  L +  +++GL D+ F  + L+++Y+KC     A+ +FD MP ++  SWNA+++   +
Sbjct: 114 GAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAE 173

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S     A +LF EM    +V  +   +AL+               + EG  P+  +L   
Sbjct: 174 SRKPAQAMELFLEMQRVELVPDDATFAALL--------------ATVEG--PSWYSLM-- 215

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                        ++ HG + K G    + V NA ++ Y++CG    +  +F+ +   + 
Sbjct: 216 -------------QQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDL 262

Query: 187 VTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +++ +M+   A      EA+  F R+M    V  D  S +SV+ VC+  GC         
Sbjct: 263 ISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGC--------- 313

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIFSNLPERS 302
            D++      G+ +H L +K+G E   H+ N+++ MY +   N  M+ A   F +L  + 
Sbjct: 314 -DDR-----QGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKD 367

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRM----------------KSC-------------- 332
            VSWN M+ GY     S+ A+   + M                +SC              
Sbjct: 368 AVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHS 427

Query: 333 -----GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                GF  ++  S +++    + G +   R+ F+     S   WN+M+  Y+Q    + 
Sbjct: 428 LVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQT 487

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID---NYVASG 444
              LF EM    V  D  T   +L++ +  G+++ G ++   S++T   I     + A G
Sbjct: 488 VTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEI-LNSMETRYKIPLRMEHYACG 546

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-----SLDIEAFMFFKQMRQ 498
            + +Y +  + + A+ +   +P + D + W +++    ++     + D+ + +F  + RQ
Sbjct: 547 -VDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELASDVASHLFVAEPRQ 605

Query: 499 NEMY 502
           +  Y
Sbjct: 606 HSTY 609


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 178/584 (30%), Positives = 293/584 (50%), Gaps = 80/584 (13%)

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
            +K +     + +F  M+ + +  DS  L +V+  CA                  S    
Sbjct: 49  FSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCA----------------ALSALQT 92

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+Q+HC  +  G   D  + +SLL MY +   +  A  +F  LP+  VV+ + +I+ + +
Sbjct: 93  GKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFAR 152

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
           K +  +  EL  + +  G E + V                               SWN M
Sbjct: 153 KGRVKETKELFYQTRDLGVELNLV-------------------------------SWNGM 181

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +S +++S ++ +A+ +F+ M   G+KPD T+++ +L +   + +   G Q+H   +K   
Sbjct: 182 ISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGL 241

Query: 436 HIDNYVASGLIGIYSKC----------------------------QRNELAE---RVFHR 464
             D +V S LI +Y KC                             RN L +    VF +
Sbjct: 242 GPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQ 301

Query: 465 IP--ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
               +L++V W SMIA  S N  D+EA   F++M+   + P   +   +L +C  +++  
Sbjct: 302 FKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALL 361

Query: 523 QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA 582
            G+  H    ++G  ND++VGSALI+MY KCG +  +R  FDMM  +N V+WN ++ GYA
Sbjct: 362 HGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYA 421

Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
            +G   EA+ +++ M   G KPD ++F  +L+AC+  GL + G   F+SM  +HGVE  +
Sbjct: 422 MHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARM 481

Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
           +HY+CM+  LGR+G   EA  +I +MP + D  +W  LLSSCR+H  V L + AA+ +F 
Sbjct: 482 EHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFE 541

Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L+P+N   Y LL+NIY+S   W ++  VR++M    + K+P YS
Sbjct: 542 LEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYS 585



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 226/437 (51%), Gaps = 33/437 (7%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +H   L +GL  D+ + + L+ +Y + ++   A+++FDK+P   + + +A++S   
Sbjct: 92  TGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFA 151

Query: 66  KSDDL----EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
           +   +    E  Y+  D   E N+VSWN +IS   R+G    A+ ++  M  EG  P   
Sbjct: 152 RKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGT 211

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           +++SV  A   L     G + H  VIK GL  + +V +AL+ +Y KC        VF EM
Sbjct: 212 SVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEM 271

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES- 240
            E +     A+++GL++   V  ALE+F+    K + ++ VS +S++  C++ G  +E+ 
Sbjct: 272 DEVDVGACNALVTGLSRNGLVDNALEVFKQF--KGMDLNVVSWTSMIASCSQNGKDMEAL 329

Query: 241 DVFAQSD------------------NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
           ++F +                       +  +HG+  HC +++ G   D+++ ++L+DMY
Sbjct: 330 ELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMY 389

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           AK G M ++ + F  +P R++VSWN ++AGY    ++ +AI + + M+ CG +PD V+  
Sbjct: 390 AKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFT 449

Query: 343 NMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
            +L AC + G  + G   FDSM         +  ++ M++   +S   +EA  + ++M F
Sbjct: 450 CVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPF 509

Query: 398 RGVKPDRTTLAIILSSC 414
              +PD      +LSSC
Sbjct: 510 ---EPDSCVWGALLSSC 523



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 200/465 (43%), Gaps = 93/465 (20%)

Query: 105 LSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL 164
           + V++ M  +G VP    L +V K   AL  ++ G++ H   +  GL  +  V ++LL +
Sbjct: 59  IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118

Query: 165 YAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSL 224
           Y +    K A  VF+++ +P  VT +A++S  A+  RV E  E+F       V ++ VS 
Sbjct: 119 YVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSW 178

Query: 225 SSVLGVCAREGC--------------GVESDVFAQSD-----NKFSRNVHGQQVHCLTIK 265
           + ++    R G               G++ D  + S            + G Q+HC  IK
Sbjct: 179 NGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIK 238

Query: 266 LGFEADLHLSNSLLDMYAK-------------------------------NGDMDSAEVI 294
            G   D  + ++L+DMY K                               NG +D+A  +
Sbjct: 239 QGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEV 298

Query: 295 FSNLP--ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---- 348
           F      + +VVSW  MIA   Q  +  +A+EL + M+  G +P+ VT   +L AC    
Sbjct: 299 FKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIA 358

Query: 349 ------------VRSG---DIKTG----------------REMFDSMPSPSVSSWNAMLS 377
                       +R+G   D+  G                R  FD MP+ ++ SWN++++
Sbjct: 359 ALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMA 418

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAASLKTA 434
            Y+      EAI +F  MQ  G KPD  +   +LS+C   G+ E G       + +    
Sbjct: 419 GYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVE 478

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
           + +++Y  S ++ +  +  R E A  +  ++P E D   W ++++
Sbjct: 479 ARMEHY--SCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLS 521


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 195/667 (29%), Positives = 330/667 (49%), Gaps = 65/667 (9%)

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK--HAVPVFEEMSE 183
           + ++ TAL    H    H  + +     ++++ N+LL+ Y + G     HA  + +EM  
Sbjct: 8   LLRSCTAL---PHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPR 64

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDV 242
            N V++  ++S  ++      ALE F        + +D  + ++ L  C+R       D+
Sbjct: 65  RNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRA-----LDL 119

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+ VH +T+  G    + LSNSL  MYA  G+M  A  +F    E  
Sbjct: 120 RT-----------GKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHD 168

Query: 303 VVSWNVMIAGY---GQKYQSTKAIELL-------------QRMKSC-------------- 332
            VSWN +++GY   G + ++ K   L+               +K C              
Sbjct: 169 DVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAV 228

Query: 333 -------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN- 384
                  G + D   +  M+    + G +     +F S+P P+V  +NAM++ + + E  
Sbjct: 229 HGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAA 288

Query: 385 -----HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
                 +EA+ L+ EMQ RG++P   T + IL +C   G    GKQ+H   LK + H D+
Sbjct: 289 VGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDD 348

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
           Y+ S LI +YS     E   R F  +P+ DIV W SMI+G   N L  +A   F++    
Sbjct: 349 YIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICY 408

Query: 500 EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGA 559
            + P  F+ ++V+++CA L+ +  G Q+     K G+     +G++ I M  + GD+   
Sbjct: 409 GLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAV 468

Query: 560 RQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
            + F  M  ++ V+W+ +I  +AQ+G   +A+R++ +M+ + V P+++TF+ +LTACSH 
Sbjct: 469 TRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHG 528

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           GLVD G+  +  M+ ++G+ P + H TC++D LGRAG   +AE  I +    DD V+W  
Sbjct: 529 GLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRS 588

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL+SCR+H ++   +  A+++  L+P +SA Y +L N+Y   G        R+LM E  +
Sbjct: 589 LLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGV 648

Query: 740 VKDPAYS 746
            K+P  S
Sbjct: 649 KKEPGLS 655



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/593 (25%), Positives = 288/593 (48%), Gaps = 65/593 (10%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCK--SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLE 101
           H+    P   ++  N++L+A C+        A +L DEMP RN VS+N LIS+  R GL 
Sbjct: 24  HIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSRAGLP 83

Query: 102 EKALSVYNKMSNE-GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANA 160
            +AL  + +     G      T A+   A +  LD+  G+  H + +  GL   ++++N+
Sbjct: 84  GRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNS 143

Query: 161 LLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
           L S+YA CG    A  VF+   E ++V++ +++SG  +     E L++F LM    +  +
Sbjct: 144 LASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWN 203

Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
           S +L S++  CA             S +   R++  + VH   +K G +ADL L+++++D
Sbjct: 204 SFALGSIIKCCA-------------SGSDVGRHI-AEAVHGCVVKAGLDADLFLASAMID 249

Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ------KYQSTKAIELLQRMKSCGF 334
           MYAK G + +A  +F ++P+ +V+ +N MIAG+ +      K  S +A+ L   M+S G 
Sbjct: 250 MYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGM 309

Query: 335 EPDEVTSINMLVACVRSGDIKTGREM---------------------------------- 360
           +P E T  ++L AC  +G+   G+++                                  
Sbjct: 310 QPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYR 369

Query: 361 -FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
            F S+P   + +W +M+S   Q+E  ++A++LF+E    G+KPD  T++ ++++CA++ +
Sbjct: 370 CFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAV 429

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
             +G+Q+   ++K   +    + +  I + ++    +   R F  +   D+V W+++I+ 
Sbjct: 430 ARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISS 489

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVN 538
            + +    +A   F +M   ++ P + +F  VL++C+       G + +  ++ + G   
Sbjct: 490 HAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSP 549

Query: 539 DIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEM-----IHGYAQNG 585
            I   + ++++  + G +  A  F  D     + V W  +     IHG  + G
Sbjct: 550 TIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERG 602



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 208/462 (45%), Gaps = 94/462 (20%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA  + +GL +  FL N L  +Y+ C     A+ +FD     D  SWN++L     
Sbjct: 122 GKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLL----- 176

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                     S  VR G  E+ L V++ M + G       L S+
Sbjct: 177 --------------------------SGYVRAGAREETLKVFSLMCHHGLGWNSFALGSI 210

Query: 127 FKASTALLDVEHGRR----CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
            K   +  DV  GR      HG V+K GLD ++++A+A++ +YAK G   +AV +F+ + 
Sbjct: 211 IKCCASGSDV--GRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVP 268

Query: 183 EPNEVTFTAMMSGLAKTDRVV------EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +PN + F AM++G  + +  V      EAL ++  M  + +     + SS+L  C   G 
Sbjct: 269 DPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAG- 327

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                     +  F + +HGQ      +K  F  D ++ ++L+D+Y+ +G M+     F 
Sbjct: 328 ----------EFGFGKQIHGQ-----VLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFR 372

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--------- 347
           +LP++ +V+W  MI+G  Q     KA+ L Q     G +PD  T  +++ A         
Sbjct: 373 SLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVART 432

Query: 348 --------------------------CVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
                                     C RSGD+      F  M S  V SW+A++SS++Q
Sbjct: 433 GEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQ 492

Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
               ++A+++F EM    V P+  T   +L++C+  G+++ G
Sbjct: 493 HGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDG 534



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 214/447 (47%), Gaps = 42/447 (9%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNG------LEEKALS 106
           D++  +A++    K   L  A  LF  +P+ NV+ +N +I+   R+       +  +ALS
Sbjct: 240 DLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALS 299

Query: 107 VYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYA 166
           +Y++M + G  P+  T +S+ +A     +   G++ HG V+K     + Y+ +AL+ LY+
Sbjct: 300 LYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYS 359

Query: 167 KCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS 226
             G  +     F  + + + VT+T+M+SG  + +   +AL +F+  I   +  D  ++SS
Sbjct: 360 DSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSS 419

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           V+  CA       S   A++         G+Q+ CL IK GF     + NS + M A++G
Sbjct: 420 VMNACA-------SLAVART---------GEQIQCLAIKYGFNRFTAMGNSFIHMCARSG 463

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
           D+D+    F  +  R VVSW+ +I+ + Q   +  A+ +   M +    P+EVT +N+L 
Sbjct: 464 DVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLT 523

Query: 347 ACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           AC   G +  G   ++ M      SP++     ++    ++    +A    R+  F    
Sbjct: 524 ACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFH--- 580

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASL-----KTASHI---DNYVASGLIGIYSKCQ 453
            D      +L+SC   G +E G+ V    +      +AS++   + Y+ +G + + SK  
Sbjct: 581 DDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASK-T 639

Query: 454 RNELAERVFHRIPELDIVCWNSMIAGL 480
           R+ + ER   + P L    W  + +G+
Sbjct: 640 RDLMKERGVKKEPGLS---WIELRSGV 663



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 7/123 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +    ++ G    T + N  I + ++  +  +    F +M  +D+ SW+A++S+  +
Sbjct: 433 GEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQ 492

Query: 67  SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPT-- 119
                 A ++F+EM    V    V++ N+++A    GL +  L  Y  M NE G  PT  
Sbjct: 493 HGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIK 552

Query: 120 HIT 122
           H+T
Sbjct: 553 HVT 555


>gi|296084954|emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 204/677 (30%), Positives = 348/677 (51%), Gaps = 48/677 (7%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D +  NA++S       LE A  +F  + + ++V W++++S  V+NGLEE+ L ++  M 
Sbjct: 155 DSFVENALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMV 214

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           + G  P     + V  A T L   + G + H  +IK+G D  +Y+ N+L+  YAKCG  +
Sbjct: 215 SGGIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLE 274

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
               VF  MSE N V++   ++G       +EAL +F++++ +    D  SL S+L   A
Sbjct: 275 GMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILK--A 332

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
             G G                 HG+++H   ++ G E + ++ +SLLDMY    D +S  
Sbjct: 333 VSGLG--------------HLDHGKEIHGYILRAGIETNRYVVSSLLDMYIGCIDHESL- 377

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
                 P   V                   ++LL  ++  G+  DE    ++L  C    
Sbjct: 378 -----YPRVEV------------------PLKLLNYLEGGGY--DEFIMTSLLKWCSLES 412

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
            ++T + +F  +  P  + W+A++S +S +    EA+KLFR+MQF G+K +  T   ++ 
Sbjct: 413 SLETAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVIL 472

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +C A+  L  GK++H   L++    +  V + LI +YS+  +++ A ++   IP+ +I  
Sbjct: 473 ACLALENLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSEI-S 531

Query: 473 WNSMI-AGLSLNSLDIEAFMFFK-QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           WN +I A L     +I   + ++ Q+    + P   S   + +SC+       G Q HA 
Sbjct: 532 WNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDPV--SACDIFASCSSPVLLNVGTQAHAY 589

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + K G ++   + ++LI+MY  CG    A Q F++M  K+T +W  ++    ++G+  EA
Sbjct: 590 MTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEA 649

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           + L   M       D  TF ++L AC+  GLVD    +F SM+  +G+EP+ +HY+CM++
Sbjct: 650 LNLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMVE 709

Query: 651 CLGRAGHFHEAEMLIDEMPC-KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
            LGRAG F E    I+ +P  K  P+IW  LLSS R+H N+++A+ AAE+L  L+P + +
Sbjct: 710 VLGRAGMFEEVLDFINGVPTFKLGPLIWRTLLSSSRIHGNMKVAQYAAEKLLELEPSDFS 769

Query: 710 PYSLLANIYSSLGRWDD 726
              LL  +  +LG WD+
Sbjct: 770 ANLLLEQVLLTLGEWDN 786



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 177/705 (25%), Positives = 324/705 (45%), Gaps = 66/705 (9%)

Query: 37  NNTHSAQHLFDKMPHKDIYS----WNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLI 92
            + H AQ     +P  +I++    +N  L     +  ++ A KLFDEMPER++VSW  ++
Sbjct: 30  QSNHIAQTKLKPIPQNEIHARTRLFNLYLRMYVNAGAMQEARKLFDEMPERSLVSWTIVM 89

Query: 93  SALVRNGLEEKALSVYNKM---SNEGFV-PTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           S   R+G   + L ++  M   S  G + P     A V +A   +  + +GR  HGLV+K
Sbjct: 90  SGYARHGPASEVLMMFWDMLCGSGGGLLRPDSFVFAVVLRACGMVECLSYGRGVHGLVVK 149

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
                + +V NAL+S+Y  CG  + A  VF  + +P+ V +++++SG  K     E L +
Sbjct: 150 QSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRI 209

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
           F  M+   +  D+ + S VLG C    C                   G Q HC  IK+GF
Sbjct: 210 FCDMVSGGIEPDAFAFSMVLGACTNLECW----------------DFGTQAHCYIIKMGF 253

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           ++ L+L NSL+D YAK GD++    +FS++ E+++VSWN  I GY   +   +A+ + Q 
Sbjct: 254 DSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQI 313

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
           +     + D+ + +++L A    G +  G+E+   +    +             E ++  
Sbjct: 314 LMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGI-------------ETNRYV 360

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           +    +M + G     +    +      +  LE G              D ++ + L+  
Sbjct: 361 VSSLLDM-YIGCIDHESLYPRVEVPLKLLNYLEGGG------------YDEFIMTSLLKW 407

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
            S     E A+RVF R+ + D   W+++I+G S N    EA   F++M+ + +   +F+F
Sbjct: 408 CSLESSLETAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTF 467

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM--M 566
            +V+ +C  L +  +G+++H +I + GY ++  V + LI +Y    +++  +Q   +  M
Sbjct: 468 TSVILACLALENLRKGKELHCKILRSGYESNFSVVNTLINLY---SELWQHKQALKLCSM 524

Query: 567 HGKNTVTWNEMIHG-YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
              + ++WN +I        Y      L++  ++ G   D ++   I  +CS   L++VG
Sbjct: 525 IPDSEISWNFLIRACLGAEDYEIIHKLLWRIQVSHG-NLDPVSACDIFASCSSPVLLNVG 583

Query: 626 VEIFNSMQLDHGVEPILDHYT---CMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            +    M        ++ H T    +I      G F EA    + MP KD    W  +LS
Sbjct: 584 TQAHAYMT----KRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDT-CSWTSILS 638

Query: 683 SCRLHANVRLAKRAAEEL-FRLDPKNSAPYSLLANIYSSLGRWDD 726
           +   H +   A     ++ ++  P + + +  + N  + +G  D+
Sbjct: 639 ARVEHGHPSEALNLISQMRWKNKPADQSTFRSVLNACAQMGLVDE 683



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/490 (20%), Positives = 197/490 (40%), Gaps = 123/490 (25%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G   H +I++ G     +L N L++ Y+KC +    + +F  M  K++            
Sbjct: 241 GTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNL------------ 288

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                              VSWN  I+  V N    +AL ++  +  E       +L S+
Sbjct: 289 -------------------VSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSI 329

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC-----GWTKHAVP----- 176
            KA + L  ++HG+  HG +++ G++ N YV ++LL +Y  C      + +  VP     
Sbjct: 330 LKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMYIGCIDHESLYPRVEVPLKLLN 389

Query: 177 ------------------------------VFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
                                         VF  + +P+   ++A++SG +      EAL
Sbjct: 390 YLEGGGYDEFIMTSLLKWCSLESSLETAKRVFTRVEQPDTAPWSALISGHSWNGCFAEAL 449

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
           ++FR M    +  +  + +SV+  C            A  + +      G+++HC  ++ 
Sbjct: 450 KLFRKMQFDGIKANEFTFTSVILAC-----------LALENLR-----KGKELHCKILRS 493

Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
           G+E++  + N+L+++Y++      A  + S +P+ S +SWN +I             +LL
Sbjct: 494 GYESNFSVVNTLINLYSELWQHKQALKLCSMIPD-SEISWNFLIRACLGAEDYEIIHKLL 552

Query: 327 QRMKSCGFEPDEVTSINMLVACVRS----------------------------------- 351
            R++      D V++ ++  +C                                      
Sbjct: 553 WRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSAC 612

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           G      + F+ MP     SW ++LS+  +  +  EA+ L  +M+++    D++T   +L
Sbjct: 613 GKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTFRSVL 672

Query: 412 SSCAAMGILE 421
           ++CA MG+++
Sbjct: 673 NACAQMGLVD 682



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G   HA++ + GL     + N LI++YS C     A   F+ MP KD  SW +ILSA+ +
Sbjct: 583 GTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVE 642

Query: 67  SDDLEFAYKLFDEMPERN----VVSWNNLISALVRNGLEEKALSVYNKM 111
                 A  L  +M  +N      ++ ++++A  + GL ++A  ++  M
Sbjct: 643 HGHPSEALNLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFSM 691


>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
 gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
          Length = 590

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 158/419 (37%), Positives = 248/419 (59%), Gaps = 1/419 (0%)

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
           RM +  + P       ++   VR G +   R + D MP  SV SW  M+S YSQ+E H E
Sbjct: 35  RMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVE 94

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+ LF +M   G  P+  TLA +L+SC+    +  GKQVH+  +KT      +V S L+ 
Sbjct: 95  ALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLD 154

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+K +  + A RVF  +PE D+V   ++I+G +   LD EA   F+Q+    M     +
Sbjct: 155 MYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVT 214

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           F T++++ + L+S   G+QVHA I +      + + ++LI+MY KCG +  +R+ FD M 
Sbjct: 215 FTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNML 274

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ V+WN M+ GY ++G G E + L+KD+    VKPD +T +A+L+ CSH GLVD G++
Sbjct: 275 ERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLSGCSHGGLVDEGLD 333

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           IF+++  +        HY C+ID LGR+G   +A  LI+ MP +  P IW  LL +CR+H
Sbjct: 334 IFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVH 393

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ANV + +  A++L  ++P+N+  Y +L+NIY++ G W D+  VR+LM E  + K+P  S
Sbjct: 394 ANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQS 452



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 192/402 (47%), Gaps = 53/402 (13%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++A   G+ +HA ++        FL  RL+ +Y +C     A+++ D+M           
Sbjct: 23  RRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRM----------- 71

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
                               PER+VVSW  +IS   +     +AL ++ KM   G +P  
Sbjct: 72  --------------------PERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 111

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            TLA+V  + +    +  G++ H L++K   + +++V ++LL +YAK    + A  VF+ 
Sbjct: 112 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 171

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           + E + V+ TA++SG A+     EAL++FR +  + +  + V+ +++  V A  G     
Sbjct: 172 LPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTL--VTALSG----- 224

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
              A  D       +G+QVH L ++      + L NSL+DMY+K G +  +  +F N+ E
Sbjct: 225 --LASLD-------YGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLE 275

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           RSVVSWN M+ GYG+     + I L + +     +PD VT + +L  C   G +  G ++
Sbjct: 276 RSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDI 334

Query: 361 FDSMPSPS-----VSSWNAMLSSYSQSENHKEAIKLFREMQF 397
           FD++            +  ++    +S   ++A+ L   M F
Sbjct: 335 FDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPF 376



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 182/380 (47%), Gaps = 58/380 (15%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           GR+ H  +I       +++   L+++Y +CG    A  V + M E + V++T M+SG ++
Sbjct: 29  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 88

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
           T+R VEAL++F  M+R     +  +L++VL  C+    G +S               G+Q
Sbjct: 89  TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCS----GPQSI------------YQGKQ 132

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           VH L +K  FE+ + + +SLLDMYAK+ ++  A  +F  LPER VVS   +I+GY QK  
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVAC------------------------------ 348
             +A++L +++ S G + + VT   ++ A                               
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252

Query: 349 -----VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                 + G +   R +FD+M   SV SWNAML  Y +     E I LF+++  + VKPD
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPD 311

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTAS---HIDNYVASGLIGIYSKCQRNELAER 460
             TL  +LS C+  G+++ G  +    +K  S   H  +Y    +I +  +  R E A  
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY--GCIIDLLGRSGRLEKALN 369

Query: 461 VFHRIP-ELDIVCWNSMIAG 479
           +   +P E     W S++  
Sbjct: 370 LIENMPFESTPSIWGSLLGA 389



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 146/271 (53%), Gaps = 2/271 (0%)

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           +++C     L  G+QVHA  +        ++ + L+ +Y +C   + A  V  R+PE  +
Sbjct: 17  ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSV 76

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           V W +MI+G S     +EA   F +M +    P +++ ATVL+SC+   S +QG+QVH+ 
Sbjct: 77  VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 136

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + K  + + +FVGS+L++MY K  +I  AR+ FD +  ++ V+   +I GYAQ G  +EA
Sbjct: 137 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 196

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           + L++ + + G++ + +TF  ++TA S    +D G ++ +++ L   +   +     +ID
Sbjct: 197 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQV-HALILRKELPFFVALQNSLID 255

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
              + G    +  + D M  +   V W  +L
Sbjct: 256 MYSKCGKLLYSRRVFDNM-LERSVVSWNAML 285



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 138/261 (52%), Gaps = 19/261 (7%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           ++  +++L    KS++++ A ++FD +PER+VVS   +IS   + GL+E+AL ++ ++ +
Sbjct: 146 MFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYS 205

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
           EG    H+T  ++  A + L  +++G++ H L+++  L   + + N+L+ +Y+KCG   +
Sbjct: 206 EGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLY 265

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           +  VF+ M E + V++ AM+ G  +     E + +F+  + K V  DSV+L +VL  C+ 
Sbjct: 266 SRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFK-DLHKEVKPDSVTLLAVLSGCSH 324

Query: 234 EGCGVES-DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
            G   E  D+F     + S  +H     C                ++D+  ++G ++ A 
Sbjct: 325 GGLVDEGLDIFDTVVKEQSALLHTGHYGC----------------IIDLLGRSGRLEKAL 368

Query: 293 VIFSNLPERSVVS-WNVMIAG 312
            +  N+P  S  S W  ++  
Sbjct: 369 NLIENMPFESTPSIWGSLLGA 389



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 90/165 (54%), Gaps = 1/165 (0%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +   +++C +  + ++GRQVHA++    Y   +F+G+ L+ MY +CG +  AR   D M 
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ V+W  MI GY+Q     EA+ L+  M+ +G  P++ T   +LT+CS    +  G +
Sbjct: 73  ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           + +S+ +    E  +   + ++D   ++ +  EA  + D +P +D
Sbjct: 133 V-HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERD 176


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 158/407 (38%), Positives = 245/407 (60%), Gaps = 4/407 (0%)

Query: 340 TSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           T ++M   C   G +     +FD M   +V +W +++++Y++     EAI+LF EM   G
Sbjct: 38  TLLDMYAKC---GVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREG 94

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V PD  T+  +L +CA  G LE+GK VH    +     + +V + L+ +Y+KC   E A 
Sbjct: 95  VSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDAN 154

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
            VF  +P  DI+ WN+MI G S NSL  EA   F  M   EM P   + A +L +CA L+
Sbjct: 155 SVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVL-EMKPDGTTLACILPACASLA 213

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S  +G++VH  I ++G+ +D  V +AL++MY KCG    AR  FDM+  K+ +TW  MI 
Sbjct: 214 SLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIA 273

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GY  +G+G+ A+  + +M  +G++PD+++F++IL ACSHSGL+D G   FN MQ +  V+
Sbjct: 274 GYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVK 333

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P L+HY C++D L R+G    A   I  MP + D  IW  LLS CR+H +V+LA++ AE 
Sbjct: 334 PKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEH 393

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +F L+P+N+  Y LLAN Y+   +W++++ +R+ +    + K+P  S
Sbjct: 394 VFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCS 440



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 197/413 (47%), Gaps = 56/413 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   ++  +   T  CN L+++Y+KC                              
Sbjct: 17  GRAVHGSGVKACVHWKTTFCNTLLDMYAKCGV---------------------------- 48

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L+ A  +FD M  R VV+W +LI+A  R GL ++A+ ++++M  EG  P   T+ +V
Sbjct: 49  ---LDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTV 105

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A      +E+G+  H  + +  +  NI+V NAL+ +YAKCG  + A  VF EM   + 
Sbjct: 106 LHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDI 165

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++  M+ G +K     EAL +F  M+ + +  D  +L+ +L  CA           A  
Sbjct: 166 ISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACAS---------LASL 215

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D        G++VH   ++ GF +D  ++N+L+DMY K G    A ++F  +P + +++W
Sbjct: 216 D-------RGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITW 268

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
            VMIAGYG       AI     M+  G EPDEV+ I++L AC  SG +  G   F+ M  
Sbjct: 269 TVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQD 328

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                P +  +  ++   ++S     A K  + M    ++PD T    +LS C
Sbjct: 329 ECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMP---IEPDATIWGALLSGC 378



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 180/400 (45%), Gaps = 58/400 (14%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + S+ +A     DV  GR  HG  +K  +       N LL +YAKCG    A+ VF+ MS
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
               VT+T++++  A+     EA+ +F  M R+ VS D  ++++VL  CA  G  +E+  
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNG-SLEN-- 117

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+ VH    +   ++++ + N+L+DMYAK G M+ A  +F  +P + 
Sbjct: 118 -------------GKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKD 164

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--- 359
           ++SWN MI GY +     +A+ L   M     +PD  T   +L AC     +  G+E   
Sbjct: 165 IISWNTMIGGYSKNSLPNEALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHG 223

Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                                           +FD +P+  + +W  M++ Y        
Sbjct: 224 HILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNN 283

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---VHAASLKTASHIDNYVASG 444
           AI  F EM+  G++PD  +   IL +C+  G+L+ G +   V          +++Y    
Sbjct: 284 AITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYAC-- 341

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
           ++ + ++  +  +A +    +P E D   W ++++G  ++
Sbjct: 342 IVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIH 381



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 142/279 (50%), Gaps = 3/279 (1%)

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           IL +CA  G +  G+ VH + +K   H      + L+ +Y+KC   + A  VF  +    
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           +V W S+IA  +   L  EA   F +M +  + P  F+  TVL +CA   S   G+ VH 
Sbjct: 64  VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            I ++   ++IFV +AL++MY KCG +  A   F  M  K+ ++WN MI GY++N   +E
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+ L+ DM+   +KPD  T   IL AC+    +D G E+   + L +G          ++
Sbjct: 184 ALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHI-LRNGFFSDQQVANALV 241

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
           D   + G    A +L D +P K D + W V+++   +H 
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTK-DLITWTVMIAGYGMHG 279


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 235/786 (29%), Positives = 367/786 (46%), Gaps = 116/786 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  + +     D  + N LI +Y KC  +                           
Sbjct: 123 GRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGS--------------------------- 155

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              L +A + FD++  +N VSWN++IS   + G +  A  ++  M  +G  PT  T  S+
Sbjct: 156 ---LGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSL 212

Query: 127 FKASTALL--DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
              + +L   DV    +    + K G   +++V + L+S +AK G   HA  +F +M   
Sbjct: 213 VTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETR 272

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMF---RLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           N VT   +M GL +     EA ++F     MI  +     + LSS       E  G+   
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGL--- 329

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                  K  R VHG   H +T  L  +  + + N L++MYAK G +  A  +F  + E+
Sbjct: 330 -------KKGREVHG---HVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEK 378

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV------------ 349
             VSWN MI G  Q     +A+E  Q M+     P   T I+ + +C             
Sbjct: 379 DSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIH 438

Query: 350 -----------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH- 385
                                   +G +   R++F SMP     SWN+++ + + SE   
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSL 498

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
            EA+  F      G K +R T + +LS+ +++   E GKQ+H  +LK     +    + L
Sbjct: 499 PEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENAL 558

Query: 446 IGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           I  Y KC   +  E++F R+ E  D V WNSMI+G   N L  +A      M Q      
Sbjct: 559 IACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLD 618

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            F +ATVLS+ A +++  +G +VHA   +    +D+ VGSAL++MY KCG +  A +FF+
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VKPDDITFVAILTACSHSGLVD 623
            M                          L+ +M   G   PD +TFV +L+ACSH+GL++
Sbjct: 679 TMP-------------------------LFANMKLDGQTPPDHVTFVGVLSACSHAGLLE 713

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G + F SM   +G+ P ++H++CM D LGRAG   + E  I++MP K + +IW  +L +
Sbjct: 714 EGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 773

Query: 684 CRLHANVR---LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           C   AN R   L K+AAE LF+L+P+N+  Y LL N+Y++ GRW+DL   R+ M +  + 
Sbjct: 774 C-CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVK 832

Query: 741 KDPAYS 746
           K+  YS
Sbjct: 833 KEAGYS 838



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 4/200 (2%)

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
           + K  H+   K     D Y+ + LI  Y +   +  A +VF  +P  + V W  +++G S
Sbjct: 19  AAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYS 78

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS--FQGRQVHAQIEKDGYVND 539
            N    EA +F + M +  ++   ++F + L +C +L S     GRQ+H  + K  Y  D
Sbjct: 79  RNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVD 138

Query: 540 IFVGSALIEMYCKCGDIYG-ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
             V + LI MY KCG   G A + FD +  KN+V+WN +I  Y+Q G    A +++  M 
Sbjct: 139 AVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQ 198

Query: 599 ASGVKPDDITFVAIL-TACS 617
             G +P + TF +++ TACS
Sbjct: 199 CDGSRPTEYTFGSLVTTACS 218



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 9/171 (5%)

Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
           H+++ K+G   D+++ + LI  Y + GD   AR+ FD M  +N V+W  ++ GY++NG  
Sbjct: 24  HSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEH 83

Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV--GVEIFNSM-QLDHGVEPILDH 644
            EA+   +DM+  GV  +   FV+ L AC     V +  G +I   + +L + V+ ++ +
Sbjct: 84  KEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSN 143

Query: 645 YTCMI--DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
               +   C G  G+   A    D++  K+  V W  ++S      + R A
Sbjct: 144 VLISMYWKCGGSLGYALRA---FDDVQVKNS-VSWNSIISVYSQTGDQRFA 190


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 187/637 (29%), Positives = 323/637 (50%), Gaps = 56/637 (8%)

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           + H   +K+GL  + +V   L  LYA+     HA  +FEE        + A++       
Sbjct: 22  QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81

Query: 201 RVVEALEMFRLMIRKAVS---IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
           + VE L +F  M   A++    D+ ++S  L  C+    G++                G+
Sbjct: 82  KWVETLSLFHQMNADAITEERPDNYTVSIALKSCS----GLQKLEL------------GK 125

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
            +H    K   + D+ + ++L+++Y+K G M+ A  +F+  P++ VV W  +I GY Q  
Sbjct: 126 MIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNG 185

Query: 318 QSTKAIELLQRMKSC-GFEPDEVTSINMLVACV--------------------------- 349
               A+    RM       PD VT ++   AC                            
Sbjct: 186 SPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLA 245

Query: 350 --------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                   ++G I++   +F  MP   + SW++M++ Y+ +     A+ LF EM  + ++
Sbjct: 246 NSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIE 305

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            +R T+   L +CA+   LE GK +H  ++     +D  V++ L+ +Y KC   + A  +
Sbjct: 306 LNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDL 365

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F+R+P+ D+V W  + +G +   +  ++   F  M      P   +   +L++ ++L   
Sbjct: 366 FNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIV 425

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
            Q   +HA + K G+ N+ F+G++LIE+Y KC  I  A + F  M  K+ VTW+ +I  Y
Sbjct: 426 QQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAY 485

Query: 582 AQNGYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
             +G G+EA++L+  M   S VKP+D+TFV+IL+ACSH+GL++ G+++F+ M  ++ + P
Sbjct: 486 GFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMP 545

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
             +HY  M+D LGR G   +A  +I+EMP +  P +W  LL +CR+H N+++ + AA  L
Sbjct: 546 NTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNL 605

Query: 701 FRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
           F LDP ++  Y+LL+NIY     W D   +R L+ EN
Sbjct: 606 FLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKEN 642



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 258/547 (47%), Gaps = 87/547 (15%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH+  L+ GL  D+F+  +L  LY++          +  + H                  
Sbjct: 23  LHSQCLKVGLAHDSFVVTKLNVLYAR----------YASLCH------------------ 54

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV---PTHITLASV 126
              A+KLF+E P + V  WN L+ +    G   + LS++++M+ +      P + T++  
Sbjct: 55  ---AHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIA 111

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K+ + L  +E G+  HG + K  +D +++V +AL+ LY+KCG    AV VF E  + + 
Sbjct: 112 LKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDV 171

Query: 187 VTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           V +T++++G  +      AL  F R+++ + VS D V+L S    CA+            
Sbjct: 172 VLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQ-----------L 220

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           SD    R+VHG        + GF+  L L+NS+L++Y K G + SA  +F  +P + ++S
Sbjct: 221 SDFNLGRSVHG-----FVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIIS 275

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------- 358
           W+ M+A Y      T A+ L   M     E + VT I+ L AC  S +++ G+       
Sbjct: 276 WSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAV 335

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                       ++F+ MP   V SW  + S Y++     +++ 
Sbjct: 336 NYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLG 395

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +F  M   G +PD   L  IL++ + +GI++    +HA   K+    + ++ + LI +Y+
Sbjct: 396 VFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYA 455

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFA 509
           KC   + A +VF  +   D+V W+S+IA    +    EA   F QM   +++ P   +F 
Sbjct: 456 KCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFV 515

Query: 510 TVLSSCA 516
           ++LS+C+
Sbjct: 516 SILSACS 522



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 211/454 (46%), Gaps = 84/454 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H  + +  + +D F+ + LIELYSKC   + A                        
Sbjct: 124 GKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDA------------------------ 159

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFVPTHITLAS 125
                   K+F E P+++VV W ++I+   +NG  E AL+ +++M   E   P  +TL S
Sbjct: 160 -------VKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVS 212

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A   L D   GR  HG V + G D  + +AN++L+LY K G  + A  +F EM   +
Sbjct: 213 AASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKD 272

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++++M++  A       AL +F  MI K + ++ V++ S L  CA             
Sbjct: 273 IISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASS----------- 321

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                S    G+ +H L +  GFE D+ +S +L+DMY K     +A  +F+ +P++ VVS
Sbjct: 322 -----SNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVS 376

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-----------CV----- 349
           W V+ +GY +   + K++ +   M S G  PD +  + +L A           C+     
Sbjct: 377 WAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVS 436

Query: 350 RSG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
           +SG                    I    ++F  M    V +W++++++Y      +EA+K
Sbjct: 437 KSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALK 496

Query: 391 LFREM-QFRGVKPDRTTLAIILSSCAAMGILESG 423
           LF +M     VKP+  T   ILS+C+  G++E G
Sbjct: 497 LFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEG 530



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 179/348 (51%), Gaps = 22/348 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N+IL+   K+  +  A  LF EMP ++++SW+++++    NG E  AL+++N+M ++   
Sbjct: 246 NSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIE 305

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
              +T+ S  +A  +  ++E G+  H L +  G + +I V+ AL+ +Y KC   K+A+ +
Sbjct: 306 LNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDL 365

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  M + + V++  + SG A+     ++L +F  M+      D+++L  +L   +  G  
Sbjct: 366 FNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIV 425

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
            ++                  +H    K GF+ +  +  SL+++YAK   +D+A  +F  
Sbjct: 426 QQALC----------------LHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKG 469

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSINMLVACVRSGDIKT 356
           +  + VV+W+ +IA YG   Q  +A++L  +M +    +P++VT +++L AC  +G I+ 
Sbjct: 470 MRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEE 529

Query: 357 GREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           G +MF  M +     P+   +  M+    +     +A+ +  EM  + 
Sbjct: 530 GIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQA 577



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 18/275 (6%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           DI    A++    K    + A  LF+ MP+++VVSW  L S     G+  K+L V+  M 
Sbjct: 342 DITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNML 401

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           + G  P  I L  +  AS+ L  V+     H  V K G D N ++  +L+ LYAKC    
Sbjct: 402 SYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSID 461

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVC 231
           +A  VF+ M   + VT++++++      +  EAL++F  M   + V  + V+  S+L  C
Sbjct: 462 NANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSAC 521

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           +  G      +  +    F   V+  Q+   T   G          ++D+  + G++D A
Sbjct: 522 SHAG------LIEEGIKMFHVMVNEYQLMPNTEHYGI---------MVDLLGRMGELDKA 566

Query: 292 EVIFSNLPERSVVS-WNVMIAGYGQKYQSTKAIEL 325
             + + +P ++    W  ++ G  + +Q+ K  EL
Sbjct: 567 LDMINEMPMQAGPHVWGALL-GACRIHQNIKIGEL 600



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 5/110 (4%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LHA + ++G  ++ F+   LIELY+KC++  +A  +F  M  KD+ +W++I++A      
Sbjct: 431 LHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQ 490

Query: 70  LEFAYKLFDEMPER-----NVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
            E A KLF +M        N V++ +++SA    GL E+ + +++ M NE
Sbjct: 491 GEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNE 540


>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 646

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 200/621 (32%), Positives = 313/621 (50%), Gaps = 66/621 (10%)

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD-RVVEALEMFRLMIRKAVSIDSV 222
           L A   +T H   +F   + P+   FT M+   ++   R    + +F+ M+R      + 
Sbjct: 48  LLAPSSYTCH---IFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNT 104

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY 282
           S  SV+     +  G ES +F                H L  K G++ D ++ N +L +Y
Sbjct: 105 SFYSVM----MKSAGSESMLFL--------------AHVL--KSGYDRDHYVRNGILGIY 144

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           AK G ++ A  +F  +P+R+V  WNVMI+GY +     +A  L   M       + +T  
Sbjct: 145 AKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWT 204

Query: 343 NMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG-VK 401
            M+    + G++KT R  FD MP  SV SWNAMLS Y+Q    +E I+LF +M   G V+
Sbjct: 205 TMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQ 264

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAER 460
           PD TT   ++SSC+++G     + +      T     NY V + L+ +++KC   E A +
Sbjct: 265 PDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHK 324

Query: 461 VFH----------------------------------RIPELDIVCWNSMIAGLSLNSLD 486
           +F                                   ++P+ D V WNSMIAG + N   
Sbjct: 325 IFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGES 384

Query: 487 IEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
           ++A   F++M  +E   P + +  +V S+C  L     G    + ++++     I V ++
Sbjct: 385 VKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNS 444

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           LI MY +CG +  A   F  M  ++ V++N +I G+A++G+G E++ L   M   G++PD
Sbjct: 445 LISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPD 504

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
            IT++AILTACSH+GL+  G  +F S++      P +DHY CMID LGRAG   EA  LI
Sbjct: 505 RITYIAILTACSHAGLLGEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLI 559

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
             MP +    I+  LL++  +H  V L + AA +LF+++P NS  Y LL+NIY+S GRW 
Sbjct: 560 QSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWK 619

Query: 726 DLRAVRELMSENCIVKDPAYS 746
           D   VR+ M +  + K    S
Sbjct: 620 DGDKVRDTMRKQGVKKTTGLS 640



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 245/527 (46%), Gaps = 80/527 (15%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           K A     L  AH+L++G   D ++ N ++ +Y+K      A+ LFD+MP + +  WN +
Sbjct: 112 KSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVM 171

Query: 61  LS-----------------------------------AQCKSDDLEFAYKLFDEMPERNV 85
           +S                                      K  +L+ A   FD+MPER+V
Sbjct: 172 ISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSV 231

Query: 86  VSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLASVFKASTALLDVEHGRRC-- 142
           VSWN ++S   + G  E+ + ++N M + G V P   T  +V  + ++L     G  C  
Sbjct: 232 VSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSL-----GDPCLS 286

Query: 143 HGLVIK----IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS---EPNEVTFTAMMSG 195
             +V K    +G   N +V  ALL ++AKCG  + A  +FE++      + V + AM+S 
Sbjct: 287 ESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISA 346

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-----DVFAQSDNKF 250
            A+   +  A  +F  M ++    D+VS +S++    + G  V++     ++ +  D+K 
Sbjct: 347 YARVGDLPSARHLFDKMPQR----DTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKP 402

Query: 251 SR----NVHGQQVHCLTIKLG-----------FEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                 +V     H   + LG            +  + + NSL+ MY++ G M  A +IF
Sbjct: 403 DEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIF 462

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
             +  R +VS+N +I+G+ +     ++IELL +MK  G EPD +T I +L AC  +G + 
Sbjct: 463 QEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLG 522

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
            G+ +F+S+  P V  +  M+    ++   +EA+KL + M    ++P       +L++ +
Sbjct: 523 EGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMP---MEPHAGIYGSLLNATS 579

Query: 416 AMGILESGKQVHAASLKTASH-IDNYVASGLIGIYSKCQRNELAERV 461
               +E G+   A   K   H   NYV   L  IY+   R +  ++V
Sbjct: 580 IHKQVELGELAAAKLFKVEPHNSGNYVL--LSNIYASAGRWKDGDKV 624



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 218/480 (45%), Gaps = 97/480 (20%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
           H+      +D Y  N IL    K   +EFA KLFDEMP+R V  WN +IS   + G EE+
Sbjct: 124 HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 183

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           A ++++ M ++                                    + +N+     +++
Sbjct: 184 ASTLFHVMGDQE-----------------------------------ISRNVITWTTMIT 208

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSV 222
            +AK G  K A   F++M E + V++ AM+SG A+     E + +F  M+    V  D  
Sbjct: 209 GHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDET 268

Query: 223 SLSSVLGVCAREG--CGVES------DVFAQSDNKFSR----NVHG-----QQVHCLTIK 265
           +  +V+  C+  G  C  ES      D      N F +    ++H      +  H +  +
Sbjct: 269 TWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQ 328

Query: 266 LG---FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
           LG   + + +   N+++  YA+ GD+ SA  +F  +P+R  VSWN MIAGY Q  +S KA
Sbjct: 329 LGVYKYRSSVPW-NAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKA 387

Query: 323 IELLQRMKSC-GFEPDEVTSINMLVACVRSGDIKTGRE---------------------- 359
           I+L + M S    +PDEVT +++  AC   G++  G                        
Sbjct: 388 IKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLIS 447

Query: 360 -------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
                        +F  M +  + S+N ++S +++  +  E+I+L  +M+  G++PDR T
Sbjct: 448 MYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRIT 507

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP 466
              IL++C+  G+L  G+++   S+K    +D+Y    +I +  +  R E A ++   +P
Sbjct: 508 YIAILTACSHAGLLGEGQRLF-ESIKFPD-VDHYAC--MIDMLGRAGRLEEAMKLIQSMP 563



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 135/618 (21%), Positives = 250/618 (40%), Gaps = 147/618 (23%)

Query: 32  LYSKCNNTHSAQHLFDKMPHKDIYS---WNAILSAQCKSDDLEFAYK--LFDEMPERNVV 86
           + SK  N H  + L  ++ H  ++    W  +L  QC       +Y   +F      +V 
Sbjct: 9   IVSKITNLHRLRQLHAQLVHHSLHHQNHWVVLLLTQCTRLLAPSSYTCHIFHAATHPDVR 68

Query: 87  SWNNLISALVRNGLEEKA-LSVYNKMSNEGFVPTHITLASVF---KASTALLDVEHGRRC 142
            +  ++    + G+  +  +S++  M     +  + +  SV      S ++L + H    
Sbjct: 69  VFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFLAH---- 124

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
              V+K G D++ YV N +L +YAK G  + A  +F+EM +     +  M+SG  K    
Sbjct: 125 ---VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNE 181

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            EA  +F +M                                  D + SRNV    +   
Sbjct: 182 EEASTLFHVM---------------------------------GDQEISRNV----ITWT 204

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
           T+  G              +AK G++ +A + F  +PERSVVSWN M++GY Q     + 
Sbjct: 205 TMITG--------------HAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEET 250

Query: 323 IELLQRMKSCG-FEPDEVTSINMLVAC--------------------------------- 348
           I L   M S G  +PDE T + ++ +C                                 
Sbjct: 251 IRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALL 310

Query: 349 ---VRSGDIKTGREMFDSMPSPSVSS---WNAMLSS------------------------ 378
               + G+++   ++F+ +      S   WNAM+S+                        
Sbjct: 311 DMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVS 370

Query: 379 -------YSQSENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
                  Y+Q+    +AIKLF EM      KPD  T+  + S+C  +G L  G    A S
Sbjct: 371 WNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNW--AVS 428

Query: 431 LKTASHIDNYVA--SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
           +   +HI   ++  + LI +YS+C   + A  +F  +   D+V +N++I+G + +   +E
Sbjct: 429 ILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGME 488

Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIE 548
           +     +M+++ + P + ++  +L++C+      +G+++   I+      D+   + +I+
Sbjct: 489 SIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIK----FPDVDHYACMID 544

Query: 549 MYCKCGDIYGARQFFDMM 566
           M  + G +  A +    M
Sbjct: 545 MLGRAGRLEEAMKLIQSM 562


>gi|357116106|ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Brachypodium distachyon]
          Length = 739

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 207/647 (31%), Positives = 320/647 (49%), Gaps = 64/647 (9%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWT-KHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
           HGL I  GLD   +V N+L + YAK   +   A  VF      +  ++  ++S L   DR
Sbjct: 60  HGLAIASGLDAFSFVTNSLAARYAKSASSFPSAAKVFHTARARDVSSYNTILSAL--PDR 117

Query: 202 VVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
             EAL     M+R   V  D+V+L+  L + A  G         ++D  +      +Q+H
Sbjct: 118 G-EALAFAAWMLRSGDVRPDAVTLTVALSLAASRG---------EADGVWIV----RQLH 163

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
            L  + G  AD+ + N+L+  Y++   + +A  +F  +P R +VSWN MI G  Q     
Sbjct: 164 ALASRSGLVADVFVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDGDCP 223

Query: 321 KAIEL--LQRMKSCG--FEPDEVTSINMLVACVRSGDIKTGRE----------------- 359
             + L  L+ +K  G    PD ++  +++ AC   G I+ GR+                 
Sbjct: 224 TEVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIG 283

Query: 360 ------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                             +  SM    V SW   +S     +  ++AI+LF  M+  GV 
Sbjct: 284 NVLVAMYYKSGAAGCARKLLKSMDERDVISWTTAIS----MDGEEDAIELFNGMRQDGVP 339

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
           P+  T   ++S+ AA      G+ +H   LKT    +   A+ LI +Y+K +R + A  V
Sbjct: 340 PNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTV 399

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS-- 519
           F R+P  +I+ WN++I+G + N L  EA   F  M +  + P + +FA+VLS+   +   
Sbjct: 400 FDRMPRPEIIAWNALISGYAQNELCNEALQVFSCMVRC-LRPNETTFASVLSAVTAVETV 458

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S   G   H Q  K G     +V  ALI+MY K G +  +R+ FD+   ++ + W  +I 
Sbjct: 459 SMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRSLIAWTAIIS 518

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
            +A++G  D  + L+ DM+ SGV PD +  +++LTAC HSG V+ G EIF+SM  +H VE
Sbjct: 519 AHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIFDSMPAEHHVE 578

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P  +HY C+ID LGRAG   EAE L+ +MP        + LL +CR+H N  +A+R A  
Sbjct: 579 PWPEHYACVIDMLGRAGRLEEAEELMLQMPTGPSVSALQSLLGACRIHGNTSIAERVAGI 638

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L   +P  S  Y LL+NIY+  G W  +  VR  M E  + K+  +S
Sbjct: 639 LTETEPTESGAYVLLSNIYAEKGDWGGVAKVRREMREKGVRKEIGFS 685



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 252/547 (46%), Gaps = 70/547 (12%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITL--ASVFKA 129
           A K+F     R+V S+N ++SAL   G   +AL+    M   G V P  +TL  A    A
Sbjct: 92  AAKVFHTARARDVSSYNTILSALPDRG---EALAFAAWMLRSGDVRPDAVTLTVALSLAA 148

Query: 130 STALLD-VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           S    D V   R+ H L  + GL  +++V NAL++ Y++      A  VF+EM   + V+
Sbjct: 149 SRGEADGVWIVRQLHALASRSGLVADVFVGNALVTAYSRGALLGAARRVFDEMPARDLVS 208

Query: 189 FTAMMSGLAK-TDRVVEALEMFRLMIR---KAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + AM+ GLA+  D   E + +F  +++    AV  D +S+ SV+  C  EG         
Sbjct: 209 WNAMICGLAQDGDCPTEVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEG--------- 259

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                  +   G+QVH  T+KLG E  + + N L+ MY K+G    A  +  ++ ER V+
Sbjct: 260 -------KIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKSGAAGCARKLLKSMDERDVI 312

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA----------------C 348
           SW   I+  G++     AIEL   M+  G  P+EVT + ++ A                C
Sbjct: 313 SWTTAISMDGEE----DAIELFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTVC 368

Query: 349 VRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
           +++G                    +   R +FD MP P + +WNA++S Y+Q+E   EA+
Sbjct: 369 LKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEAL 428

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGI--LESGKQVHAASLKTASHIDNYVASGLIG 447
           ++F  M  R ++P+ TT A +LS+  A+    +  G+  H  SLK    +  YV+  LI 
Sbjct: 429 QVFSCM-VRCLRPNETTFASVLSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALID 487

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+K    E + + F       ++ W ++I+  + +         F  M  + + P    
Sbjct: 488 MYAKRGSLEESRKAFDVTVHRSLIAWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVV 547

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMM 566
             +VL++C    +   GR++   +  + +V       A +I+M  + G +  A +    M
Sbjct: 548 LLSVLTACRHSGAVNTGREIFDSMPAEHHVEPWPEHYACVIDMLGRAGRLEEAEELMLQM 607

Query: 567 HGKNTVT 573
               +V+
Sbjct: 608 PTGPSVS 614



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 216/457 (47%), Gaps = 65/457 (14%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNG-LEEKALSVYNKM 111
           D++  NA+++A  +   L  A ++FDEMP R++VSWN +I  L ++G    + + V+ ++
Sbjct: 174 DVFVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDGDCPTEVILVFLRL 233

Query: 112 SNEGFV---PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC 168
             +G     P  I++ SV  A  +   +E GR+ H   +K+G++  + + N L+++Y K 
Sbjct: 234 LKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKS 293

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           G    A  + + M E + +++T  +S     D   +A+E+F  M +  V  + V+  +++
Sbjct: 294 GAAGCARKLLKSMDERDVISWTTAIS----MDGEEDAIELFNGMRQDGVPPNEVTFVALM 349

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
              A  GC                  +GQ +H + +K G   +   +NSL+ MYAK   M
Sbjct: 350 SALA-AGCPAR---------------YGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRM 393

Query: 289 DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
           D A  +F  +P   +++WN +I+GY Q     +A+++   M  C   P+E T  ++L A 
Sbjct: 394 DDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCMVRC-LRPNETTFASVLSAV 452

Query: 349 V-------------------------------------RSGDIKTGREMFDSMPSPSVSS 371
                                                 + G ++  R+ FD     S+ +
Sbjct: 453 TAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRSLIA 512

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           W A++S++++  N+   + LF +M   GV PD   L  +L++C   G + +G+++   S+
Sbjct: 513 WTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIF-DSM 571

Query: 432 KTASHIDNYVA--SGLIGIYSKCQRNELAERVFHRIP 466
               H++ +    + +I +  +  R E AE +  ++P
Sbjct: 572 PAEHHVEPWPEHYACVIDMLGRAGRLEEAEELMLQMP 608



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 178/362 (49%), Gaps = 27/362 (7%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +++   KS     A KL   M ER+V+SW   IS    +G EE A+ ++N M  +G  
Sbjct: 284 NVLVAMYYKSGAAGCARKLLKSMDERDVISWTTAIS---MDG-EEDAIELFNGMRQDGVP 339

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P  +T  ++  A  A     +G+  H + +K G+      AN+L+++YAK      A  V
Sbjct: 340 PNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTV 399

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F+ M  P  + + A++SG A+ +   EAL++F  M+R  +  +  + +SVL         
Sbjct: 400 FDRMPRPEIIAWNALISGYAQNELCNEALQVFSCMVR-CLRPNETTFASVLSAVT----A 454

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
           VE+   A          +G+  HC ++KLG +   ++S +L+DMYAK G ++ +   F  
Sbjct: 455 VETVSMA----------YGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDV 504

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
              RS+++W  +I+ + +       + L   M   G  PD V  +++L AC  SG + TG
Sbjct: 505 TVHRSLIAWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTG 564

Query: 358 REMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           RE+FDSMP+     P    +  ++    ++   +EA +L  +M      P  + L  +L 
Sbjct: 565 REIFDSMPAEHHVEPWPEHYACVIDMLGRAGRLEEAEELMLQMP---TGPSVSALQSLLG 621

Query: 413 SC 414
           +C
Sbjct: 622 AC 623



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 51/302 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H   L+ G+ D+    N LI +Y+K      A+ +FD+MP  +I +WNA       
Sbjct: 361 GQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPEIIAWNA------- 413

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   LIS   +N L  +AL V++ M      P   T ASV
Sbjct: 414 ------------------------LISGYAQNELCNEALQVFSCMVR-CLRPNETTFASV 448

Query: 127 FKASTAL--LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
             A TA+  + + +G   H   +K+GL  + YV+ AL+ +YAK G  + +   F+     
Sbjct: 449 LSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHR 508

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC-GVESDVF 243
           + + +TA++S  AK       + +F  M+   V+ D V L SVL  C   G      ++F
Sbjct: 509 SLIAWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIF 568

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                +       +   C                ++DM  + G ++ AE +   +P    
Sbjct: 569 DSMPAEHHVEPWPEHYAC----------------VIDMLGRAGRLEEAEELMLQMPTGPS 612

Query: 304 VS 305
           VS
Sbjct: 613 VS 614


>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
 gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
          Length = 625

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 184/641 (28%), Positives = 325/641 (50%), Gaps = 59/641 (9%)

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
           EGF P  +T + V  + +   +++        +       N+ V N+L+S Y + G  + 
Sbjct: 4   EGFRPNGVTFSGVASSCSGREELD---TIQASIAASDFHSNVVVKNSLVSAYTRSGDLRS 60

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           A  VF+ +   + +++ +M+   ++     E LE+FR M    V  DS++ +S+LG C  
Sbjct: 61  ARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKM---DVEPDSITYASILGAC-- 115

Query: 234 EGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV 293
                         +       G++VH    +  F++D  L+ +L++MY+K G ++SA  
Sbjct: 116 --------------SAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARR 161

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +F  +       WN MI+G  Q  ++ +A+ L +RMK+     D+V+ + +L AC    D
Sbjct: 162 VFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALED 221

Query: 354 IKTG-----------------------------------REMFDSMPSPS-VSSWNAMLS 377
           +  G                                   R+MFD M   + V SWN+M++
Sbjct: 222 LHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIA 281

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
           +Y+QS   +EA++L+  M+  GV+PD  T A  L +C + G    G ++H+   ++    
Sbjct: 282 AYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRT 341

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
           D ++ + ++ +Y+KC   E A   F ++   + V W++M+        D EA   + +M 
Sbjct: 342 DVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMV 401

Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE-KDGYVNDIFVGSALIEMYCKCGDI 556
                P++ + A  L++C+++ +  +G+ +H++I+  +   N +F+ ++L+ MY KCG +
Sbjct: 402 SEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCL 461

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             A   F  +  +++ +WN +I G+A +G  DE + L+ +M+  GV PD +TF  +L AC
Sbjct: 462 AIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLAC 521

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SH+GL+D G   F SM  D+ ++P+LDHY C++D L RAG   EAE L   MP    PV 
Sbjct: 522 SHAGLLDRGRSHFLSMTGDYCIKPMLDHYECLVDVLSRAGWAREAEALAMAMPFTPRPVT 581

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANI 717
           W  LL +C+LH   +    AA  L  L  + S+ Y LL+N+
Sbjct: 582 WTTLLGACKLHGETKRGVEAARSLLELGFECSSSYVLLSNL 622



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 166/628 (26%), Positives = 292/628 (46%), Gaps = 94/628 (14%)

Query: 51  HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
           H ++   N+++SA  +S DL  A K+FD +  ++++SWN+++ A  ++G  E+ L ++ K
Sbjct: 39  HSNVVVKNSLVSAYTRSGDLRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRK 98

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M  E   P  IT AS+  A +A+  +E G+  H  V +     +  +A AL+++Y+KCG 
Sbjct: 99  MDVE---PDSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGV 155

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            + A  VF+ +   +   + AM+SGL +  R  EAL +F  M  ++V ID VS  ++L  
Sbjct: 156 LESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSA 215

Query: 231 CAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
           C    C +E             ++H G ++H      G + DL +  ++ +MY+K   +D
Sbjct: 216 C----CALE-------------DLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVD 258

Query: 290 SAEVIFSNLPERS-VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
            A  +F  + E++ VVSWN MIA Y Q  +  +A+EL + MK  G +PD++T    L AC
Sbjct: 259 LARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGAC 318

Query: 349 V-----------------------------------RSGDIKTGREMFDSMPSPSVSSWN 373
                                               + G+++T    F+ M   +  +W+
Sbjct: 319 TSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWS 378

Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
           AM+ ++ Q    +EA+ L+  M   G +P   TLA  L++C+ +G L+ GK +H + ++ 
Sbjct: 379 AMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIH-SRIQA 437

Query: 434 ASHIDN--YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
              + N  ++ + L+ +Y+KC    +A  +F  +   D   WN++I G + +    E   
Sbjct: 438 TETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLS 497

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
              +M Q+ + P   +FA VL +C+      +GR     +  D               YC
Sbjct: 498 LHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMTGD---------------YC 542

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
                   +   D         +  ++   ++ G+  EA  L    +A    P  +T+  
Sbjct: 543 -------IKPMLD--------HYECLVDVLSRAGWAREAEAL---AMAMPFTPRPVTWTT 584

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           +L AC   G    GVE   S+ L+ G E
Sbjct: 585 LLGACKLHGETKRGVEAARSL-LELGFE 611



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 202/455 (44%), Gaps = 84/455 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA + R+    D  L   LI +YSKC    SA+ +FD +   D   WNA       
Sbjct: 124 GKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNA------- 176

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +IS LV++G   +AL ++ +M  E      ++  ++
Sbjct: 177 ------------------------MISGLVQHGRAREALGLFERMKAESVRIDKVSYLTI 212

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
             A  AL D+  G R H      G+DK++ V  A+ ++Y+KC     A  +F+ M+E  N
Sbjct: 213 LSACCALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTN 272

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V++ +M++  A++ R  EALE++ LM  + V  D ++ +  LG C              
Sbjct: 273 VVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGAC-------------- 318

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
               +  +  G ++H    +     D+ L  ++++MYAK G++++A   F  +  ++ V+
Sbjct: 319 --TSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVT 376

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------- 358
           W+ M+  + Q+    +A++L  RM S GF+P E+T    L AC R G ++ G+       
Sbjct: 377 WSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQ 436

Query: 359 -----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                         MF ++      SWN ++  ++   +  E +
Sbjct: 437 ATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVL 496

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
            L  EM   GV PD  T A +L +C+  G+L+ G+
Sbjct: 497 SLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGR 531



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 143/289 (49%), Gaps = 7/289 (2%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M   G +P+  T + + SSC+    L++   + A+   +  H +  V + L+  Y++   
Sbjct: 1   MLLEGFRPNGVTFSGVASSCSGREELDT---IQASIAASDFHSNVVVKNSLVSAYTRSGD 57

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              A +VF  I   D++ WNSM+   S +    E    F++M   ++ P   ++A++L +
Sbjct: 58  LRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKM---DVEPDSITYASILGA 114

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C+ +     G++VHA++ +  + +D  + +ALI MY KCG +  AR+ FD +   +   W
Sbjct: 115 CSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPW 174

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
           N MI G  Q+G   EA+ L++ M A  V+ D ++++ IL+AC     +  G+ I      
Sbjct: 175 NAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASA 234

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
             G++  L   T + +   +      A  + D M  K + V W  ++++
Sbjct: 235 -CGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAA 282



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 47/210 (22%)

Query: 7   GKLLHAHILRNGLFDDT-FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           GK +H+ I       +  FL N L+ +Y+KC     A  +F  +  +D +SWN I+    
Sbjct: 428 GKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHA 487

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
              D+                               ++ LS++ +M  +G  P ++T A 
Sbjct: 488 HHGDV-------------------------------DEVLSLHGEMVQDGVDPDYVTFAC 516

Query: 126 VFKASTALLDVEHGRRCHGL------VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           V  A +    ++ GR  H L       IK  LD        L+ + ++ GW + A  +  
Sbjct: 517 VLLACSHAGLLDRGRS-HFLSMTGDYCIKPMLDHY----ECLVDVLSRAGWAREAEALAM 571

Query: 180 EMS-EPNEVTFTAMMSGL---AKTDRVVEA 205
            M   P  VT+T ++       +T R VEA
Sbjct: 572 AMPFTPRPVTWTTLLGACKLHGETKRGVEA 601


>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
 gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 171/471 (36%), Positives = 262/471 (55%), Gaps = 52/471 (11%)

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           ++  Y +N   D A  +F  +PER + SWNVM+ GY                        
Sbjct: 1   MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGY------------------------ 36

Query: 338 EVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                      VR+ D+KT R +F+ MP   + SWNAMLS Y+Q+    EA ++F +M  
Sbjct: 37  -----------VRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMPL 85

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG--LIGIYSKCQRN 455
           +    +  +   +L++    G +E  K++        S +D  + S   L+G + + +RN
Sbjct: 86  K----NGISWNGLLAAYVQNGRIEDAKRLFE------SKMDWTLVSWNCLMGGFVRKRRN 135

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
                +F  +P+ D + W++MIAG S N    EA  FF +M+++     + SF   LS+C
Sbjct: 136 -----LFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTC 190

Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
           + +++   GRQ+H ++ K GY    +VG+AL+ MYCKCG I  AR  F  +  K+ V+WN
Sbjct: 191 SNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWN 250

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
            MIHGYA++G+G+EA+ +++ M  +G++PDD T V++L ACSH+GLVD G E F SM  D
Sbjct: 251 TMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRD 310

Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
           +G+   L HYTCM+D LGRAG   EA+ L+  MP + D   W  LL + R+H N  L ++
Sbjct: 311 YGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEK 370

Query: 696 AAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           AA+ +F ++P NS  Y LL+ +Y++ GRW D   +R  M    + K P YS
Sbjct: 371 AAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYS 421



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 203/413 (49%), Gaps = 37/413 (8%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSW 88
           +I  Y + +    A+ LFDKMP +D++SWN +L+   ++ DL+ A  LF+ MPER++VSW
Sbjct: 1   MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60

Query: 89  NNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK 148
           N ++S   +NG  ++A  ++ KM  +  +  +  LA+  +       +E  +R    + +
Sbjct: 61  NAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGR----IEDAKR----LFE 112

Query: 149 IGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEM 208
             +D  +   N L+      G+ +    +F+ M + + ++++AM++G ++     EAL  
Sbjct: 113 SKMDWTLVSWNCLMG-----GFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHF 167

Query: 209 FRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
           F  M R    ++  S +  L  C        S++ A           G+Q+HC  +K G+
Sbjct: 168 FVEMQRDCERLNRSSFTCALSTC--------SNIAALE--------LGRQLHCRLVKAGY 211

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
           +   ++ N+LL MY K G +D A   F  + E+ VVSWN MI GY +     +A+ + + 
Sbjct: 212 QTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFEL 271

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSE 383
           MK+ G  PD+ T +++L AC  +G +  G E F SM      +  +  +  M+    ++ 
Sbjct: 272 MKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAG 331

Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
             +EA  L + M F   +PD  T   +L +    G  E G++      +   H
Sbjct: 332 QLEEAQNLMKNMPF---EPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPH 381



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 157/386 (40%), Gaps = 81/386 (20%)

Query: 11  HAHILRNGLFD-----DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           H   L   LFD     D F  N ++  Y +  +  +A+ LF++MP +DI SWNA+LS   
Sbjct: 9   HKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYA 68

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++  ++ A ++F +MP +N +SWN L++A V+NG  E A  ++    +   V  +  +  
Sbjct: 69  QNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGG 128

Query: 126 VFKASTALLD------------------------------VEHGRRC------------- 142
             +    L D                              VE  R C             
Sbjct: 129 FVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALS 188

Query: 143 --------------HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
                         H  ++K G     YV NALL++Y KCG    A   F+E+ E + V+
Sbjct: 189 TCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVS 248

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
           +  M+ G A+     EAL +F LM    +  D  ++ SVL  C+  G   +   +  S N
Sbjct: 249 WNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMN 308

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVSWN 307
           +                 G  A L     ++D+  + G ++ A+ +  N+P E    +W 
Sbjct: 309 R---------------DYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWG 353

Query: 308 VMIAG---YGQKYQSTKAIELLQRMK 330
            ++     +G      KA +++  M+
Sbjct: 354 ALLGASRIHGNTELGEKAAQIIFEME 379



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 33/190 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH  +++ G     ++ N L+ +Y KC +   A+  F ++  KD+ SWN        
Sbjct: 199 GRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNT------- 251

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                   +I    R+G  E+AL+V+  M   G  P   T+ SV
Sbjct: 252 ------------------------MIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSV 287

Query: 127 FKASTALLDVEHGRR-CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EP 184
             A +    V+ G    + +    G+   +     ++ L  + G  + A  + + M  EP
Sbjct: 288 LAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEP 347

Query: 185 NEVTFTAMMS 194
           +  T+ A++ 
Sbjct: 348 DAATWGALLG 357


>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
 gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
          Length = 693

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 189/615 (30%), Positives = 309/615 (50%), Gaps = 59/615 (9%)

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-------- 235
           P+ V     +  L K+ R+ +AL++F  M RK V    V+ ++ +  C R G        
Sbjct: 40  PDVVLDCKRLDALMKSGRLSDALDLFDRMPRKNV----VAWTTAISGCTRNGQPEAAAAM 95

Query: 236 ------CGVESDVFAQSDNKFSRNVH-------GQQVHCLTIKLGFEADLHLSNSLLDMY 282
                  GV ++ FA +    +           G+QVH L ++ GF AD  + + L+++Y
Sbjct: 96  FADMLESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELY 155

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
           ++ G M +AE +F  +    VV +  +++   +     +A+E+L +M   G +P+E T  
Sbjct: 156 SRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMT 215

Query: 343 NMLVACVRS-------------------------------GDIKTGREMFDSMPSPSVSS 371
           +ML  C R                                GD      +F+++ S +V S
Sbjct: 216 SMLAECPRMIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVS 275

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           W +M+    +    ++A+++F EM    V+P+    +I L +C ++ +   G+Q+H +++
Sbjct: 276 WCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGACGSVCL---GRQIHCSAI 332

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           K     D  V++ L+ +Y +       E V  +I   D+V W + I+    N    +A  
Sbjct: 333 KCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVA 392

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
              QM      P  ++F++ LSSCA L+   QGRQ+H    K G    +  G+ALI MY 
Sbjct: 393 LLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYS 452

Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
           KCG I  AR  FD+M+  + ++WN +IHG AQ+G  +  +  + +M +SG +PDD TF+A
Sbjct: 453 KCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIA 512

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +L  C+H+GLV  G   F  M   +G+ P   HY CMID LGR G F EA  +I  MP +
Sbjct: 513 VLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFE 572

Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
            D +IW+ LL+SC+LH N+ + K A ++L  L  ++SA Y L++N+Y+    W D   VR
Sbjct: 573 PDVLIWKTLLASCKLHKNLDIGKLATDKLMELSERDSASYVLMSNLYAMHEEWQDAERVR 632

Query: 732 ELMSENCIVKDPAYS 746
             M E  + KD  +S
Sbjct: 633 RRMDEIGVKKDAGWS 647



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 154/615 (25%), Positives = 257/615 (41%), Gaps = 97/615 (15%)

Query: 50  PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN 109
           P  D+      L A  KS  L  A  LFD MP +NVV+W   IS   RNG  E A +++ 
Sbjct: 38  PPPDVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFA 97

Query: 110 KMSNEGFVPTHITLASVFKASTALLDVEH--GRRCHGLVIKIGLDKNIYVANALLSLYAK 167
            M   G         +   A  A        G + H L ++ G   + ++ + L+ LY++
Sbjct: 98  DMLESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSR 157

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
           CG    A  VF  M  P+ V +T+++S L +   +  A+E+   M+R+ +  +  +++S+
Sbjct: 158 CGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSM 217

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           L  C R                    + G+Q+H   +K+     ++ S +L+D Y++ GD
Sbjct: 218 LAECPR--------------------MIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGD 257

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
            D AE +F NL  ++VVSW  M+    +  +   A+ +   M S   EP+E      L A
Sbjct: 258 FDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGA 317

Query: 348 C--------------------------------VRSGDIKTGREMFDSMPSPSVSSWNAM 375
           C                                 RSG +     +   + +P + SW A 
Sbjct: 318 CGSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAA 377

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +S+  Q+   ++A+ L  +M   G  P+    +  LSSCA + +L+ G+Q+H  +LK   
Sbjct: 378 ISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGC 437

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
                  + LI +YSKC +   A   F  +   D++ WNS+I GL+ +         F +
Sbjct: 438 DFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSE 497

Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
           M  +   P   +F  VL  C            HA + K+G                    
Sbjct: 498 MCSSGWQPDDSTFIAVLVGCN-----------HAGLVKEG-------------------- 526

Query: 556 IYGARQFFDMMHGKNTVT-----WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
                 FF +M  +  +T     +  MI    +NG  DEA+ + K+M     +PD + + 
Sbjct: 527 ----ETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNM---PFEPDVLIWK 579

Query: 611 AILTACSHSGLVDVG 625
            +L +C     +D+G
Sbjct: 580 TLLASCKLHKNLDIG 594



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/537 (24%), Positives = 227/537 (42%), Gaps = 102/537 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H+  +R G   D ++ + LIELYS+C +  +A+ +F +M   D+  + +++SA C+
Sbjct: 129 GEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCR 188

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           + DL                                +A+ V  +M  +G  P   T+ S+
Sbjct: 189 NGDL-------------------------------ARAVEVLCQMMRQGLQPNEHTMTSM 217

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 ++    G + HG ++K+   +++Y + AL+  Y++ G    A  VFE +   N 
Sbjct: 218 LAECPRMI----GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNV 273

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ +MM    +  R+ +AL +F  MI +AV  +  + S  LG C               
Sbjct: 274 VSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGACGSV------------ 321

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+Q+HC  IK     D+ +SN+LL MY ++G +   E +   +    +VSW
Sbjct: 322 -------CLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSW 374

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
              I+   Q   S KA+ LL +M S GF P++    + L +C                  
Sbjct: 375 TAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALK 434

Query: 350 ------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             + G I + R  FD M    V SWN+++   +Q       ++ 
Sbjct: 435 LGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEA 494

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV------HAASLKTASHIDNYVASGL 445
           F EM   G +PD +T   +L  C   G+++ G+              T SH      + +
Sbjct: 495 FSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHY-----ACM 549

Query: 446 IGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-SLDIEAFMFFKQMRQNE 500
           I +  +  R + A  +   +P E D++ W +++A   L+ +LDI      K M  +E
Sbjct: 550 IDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKLHKNLDIGKLATDKLMELSE 606



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 206/432 (47%), Gaps = 28/432 (6%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
           ++   M  + +Y+  A++    +  D + A  +F+ +  +NVVSW +++   +R+G  E 
Sbjct: 232 YMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLED 291

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           AL V+++M +E   P     +    A  +   V  GR+ H   IK  L  +I V+NALLS
Sbjct: 292 ALRVFSEMISEAVEPNEFAFSIALGACGS---VCLGRQIHCSAIKCNLMTDIRVSNALLS 348

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS 223
           +Y + G+      V  ++  P+ V++TA +S   +     +A+ +   M  +  + +  +
Sbjct: 349 MYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYA 408

Query: 224 LSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
            SS L  CA           A  D        G+Q+HCL +KLG +  +   N+L++MY+
Sbjct: 409 FSSGLSSCAD---------LALLD-------QGRQLHCLALKLGCDFKVCTGNALINMYS 452

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K G + SA + F  +    V+SWN +I G  Q   +   +E    M S G++PD+ T I 
Sbjct: 453 KCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIA 512

Query: 344 MLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           +LV C  +G +K G   F  M      +P+ S +  M+    ++    EA+ + + M F 
Sbjct: 513 VLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPF- 571

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
             +PD      +L+SC     L+ GK +    L   S  D+     +  +Y+  +  + A
Sbjct: 572 --EPDVLIWKTLLASCKLHKNLDIGK-LATDKLMELSERDSASYVLMSNLYAMHEEWQDA 628

Query: 459 ERVFHRIPELDI 470
           ERV  R+ E+ +
Sbjct: 629 ERVRRRMDEIGV 640


>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 191/662 (28%), Positives = 334/662 (50%), Gaps = 54/662 (8%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L S+ +  T    +   +  H  ++ +GL  ++ +  +L+++Y  C     A  VFE + 
Sbjct: 6   LLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENID 65

Query: 183 EPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI-DSVSLSSVLGVCAREGCGVES 240
             ++V  + +++SG +K     + L++F+ ++   + + DS +  +V+            
Sbjct: 66  IRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVI------------ 113

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
               ++     R   G+ +H + +K G   D+ +++SL+ MYAK    + +  +F  +PE
Sbjct: 114 ----KAYGALGREFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPE 169

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG--- 357
           R V SWN +I+ + Q+  + KA+EL  RM+   FEP+ V+    + AC R   ++ G   
Sbjct: 170 RDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEI 229

Query: 358 --------------------------------REMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                           RE+F  M   S+ +WN+M+  Y    + 
Sbjct: 230 HRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDS 289

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           K  ++L   M   G +P +TTL  IL +C+    L  GK VH   +++    D Y+   L
Sbjct: 290 KSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSL 349

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +Y KC   +LAE VF +  +  +  WN MI+G        +A   + QM    + P  
Sbjct: 350 IDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDI 409

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +F +VLS+C++L++  +G+Q+H  I +     D  + SAL++MY KCG++  A + F+ 
Sbjct: 410 VTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNS 469

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           +  K+ V+W  MI  Y  +G   EA+  + +M   GVKPD +TF+A+L+AC H+GL+D G
Sbjct: 470 IPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEG 529

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP-CKDDPVIWEVLLSSC 684
           V+ F+ M+  +G+E  ++ Y+C+ID LGRAG   EA  ++ + P  +D+  +   L  +C
Sbjct: 530 VKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCAC 589

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
            LH +  L    A+ L    P +++ Y++L N+Y+S   WD  + VR  M E  + K P 
Sbjct: 590 CLHRDHLLGYTIAKLLVEKYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPG 649

Query: 745 YS 746
            S
Sbjct: 650 CS 651



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 169/595 (28%), Positives = 275/595 (46%), Gaps = 86/595 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            KL+H  IL  GL  D  LC  LI +Y  C +  SA+ +F+ +   DI S          
Sbjct: 22  AKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENI---DIRS---------- 68

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF-VPTHITLAS 125
                            +V  WN+L+S   +N +    L V+ ++ N    VP   T  +
Sbjct: 69  -----------------DVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPN 111

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V KA  AL     GR  H +V+K G   ++ VA++L+ +YAK    + +V VF+EM E +
Sbjct: 112 VIKAYGALGREFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERD 171

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             ++  ++S   +     +ALE+F  M R     +SVS++  +  C+R  C         
Sbjct: 172 VASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLC--------- 222

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                 R   G+++H   +K  FE D +++++L+DMY +   ++ A  +F  +  +S+V+
Sbjct: 223 ----LER---GKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVA 275

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS-------------- 351
           WN MI GY  +  S   +ELL RM   G  P + T  ++L+AC RS              
Sbjct: 276 WNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVI 335

Query: 352 ---------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                G++K    +F       V SWN M+S Y    N  +A+ 
Sbjct: 336 RSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVD 395

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           ++ +M   GV+PD  T   +LS+C+ +  LE GKQ+H +  ++    D  + S L+ +YS
Sbjct: 396 VYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYS 455

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
           KC   + A R+F+ IP+ D+V W  MI+    +    EA   F +M++  + P   +F  
Sbjct: 456 KCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLA 515

Query: 511 VLSSCAKLSSSFQGRQVHAQIE-KDGYVNDIFVGSALIEMYCKCGDI---YGARQ 561
           VLS+C       +G +  +Q+  K G    I   S LI++  + G +   YG  Q
Sbjct: 516 VLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQ 570



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 232/500 (46%), Gaps = 89/500 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+++H  ++++G   D  + + L+ +Y+K N       LF                    
Sbjct: 125 GRMIHTVVVKSGHVCDVVVASSLVGMYAKFN-------LF-------------------- 157

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               E + ++FDEMPER+V SWN +IS+  + G  EKAL ++ +M    F P  +++   
Sbjct: 158 ----EDSVQVFDEMPERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVA 213

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A + LL +E G+  H   +K   + + YV +AL+ +Y +C + + A  VF++M   + 
Sbjct: 214 ISACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSL 273

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V + +M+ G          +E+   MI +       +L+S+L  C+R             
Sbjct: 274 VAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSR------------- 320

Query: 247 DNKFSRN-VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
               SRN +HG+ VH   I+   +AD++++ SL+D+Y K G++  AE +F    +  V S
Sbjct: 321 ----SRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVES 376

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           WNVMI+GY       KA+++  +M S G +PD VT  ++L  C                 
Sbjct: 377 WNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSIS 436

Query: 349 ------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                              + G++K    +F+S+P   V SW  M+S+Y      +EA+ 
Sbjct: 437 ESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 496

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA---ASLKTASHIDNYVASGLIG 447
            F EMQ  GVKPD  T   +LS+C   G+++ G +  +   +     + I+ Y  S LI 
Sbjct: 497 HFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQY--SCLID 554

Query: 448 IYSKCQRNELAERVFHRIPE 467
           I  +  R   A  +  + PE
Sbjct: 555 ILGRAGRLLEAYGILQQKPE 574


>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 694

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 188/628 (29%), Positives = 315/628 (50%), Gaps = 57/628 (9%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           N LL+ Y+  G    A  VF+E+  P+  ++ ++++         +A  + R M  + ++
Sbjct: 30  NQLLTAYSATGLAA-ARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGLA 88

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
             + +L S                  +S     R   G Q+   +++ G   ++  +++L
Sbjct: 89  ASTFALGSA----------------LRSAAAARRPELGAQLQSFSVRCGLADNVFPASAL 132

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           LD+YAK G +  A  +F  +P R++VSWN +IAGY    +  +A+EL   M+  G  PD 
Sbjct: 133 LDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDG 192

Query: 339 VT----------------------------------SINMLVACVRSGD-IKTGREMFDS 363
            T                                  ++N  +      D +   R++FD 
Sbjct: 193 TTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDG 252

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLF-REMQFRGVKPDRTTLAIILSSCAAMGIL-E 421
           + S  + SWN+ML +Y+      EA++ F R M+  G++PD  +    +S C+  G   +
Sbjct: 253 IESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQ 312

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL---DIVCWNSMIA 478
            G+ +H+  +K        V + +I +Y++   N + E  ++    L   D V WNSM+ 
Sbjct: 313 QGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLT 372

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G S + L  +A  FF+ MR   +   +F  +  L SC+ L+    GRQVH+ + + G+ +
Sbjct: 373 GYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFAS 432

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           + FV S+LI MY KCG +  AR+ F+     ++V WN M+ GYAQ+G       L+ +M+
Sbjct: 433 NDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEML 492

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
              V  D +TFVA++TA SH GLVD G EI N+M+  + +   ++HY C +D  GRAG  
Sbjct: 493 DLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACGVDLYGRAGQL 552

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
            +A+ LI+ MP + D ++W  LL +CR+H N+ LA   A  LF  +P+  + Y LL+++Y
Sbjct: 553 DKAKELIESMPFQPDAIVWMTLLGACRIHGNMELASDVARHLFVAEPRQHSTYVLLSSMY 612

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYS 746
           S LG W D   V+++M    + K P +S
Sbjct: 613 SGLGMWSDRATVQKVMRNRALSKIPGWS 640



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 146/613 (23%), Positives = 257/613 (41%), Gaps = 92/613 (15%)

Query: 57  WNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
           WN +L+A   +  L  A ++FDE+P  +  SWN+L++A V  G    A  +   M   G 
Sbjct: 29  WNQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGL 87

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
             +   L S  +++ A    E G +     ++ GL  N++ A+ALL +YAKCG    A  
Sbjct: 88  AASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARR 147

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           VF+ M   N V++ A+++G   + +  EA+E+F  M R     D  + + +L   A    
Sbjct: 148 VFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIA---- 203

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
                          R +HG+      +K G    L   N+ +  Y++   +  +  IF 
Sbjct: 204 -------GPRWYSLMRQLHGK-----IVKYGSALGLVALNAAITAYSQCDALADSRKIFD 251

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQR-MKSCGFEPDEVTSINMLVACVRSG-DI 354
            +  R ++SWN M+  Y       +A+    R M+  G +PD  +  + +  C   G D 
Sbjct: 252 GIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDD 311

Query: 355 KTGREM--------------------------------------FDSMPSPSVSSWNAML 376
           + GR +                                      F S+      SWN+ML
Sbjct: 312 QQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSML 371

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           + YS      +A+K FR M+   ++ D   L+  L SC+ + +L  G+QVH+  +++   
Sbjct: 372 TGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFA 431

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            +++V+S LI +YSKC     A + F    +   V WNSM+ G + +         F +M
Sbjct: 432 SNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEM 491

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG-D 555
              E+     +F  ++++ +      +G ++   +E    +         +E Y  CG D
Sbjct: 492 LDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKI------PMRMEHYA-CGVD 544

Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           +YG                        + G  D+A  L + M     +PD I ++ +L A
Sbjct: 545 LYG------------------------RAGQLDKAKELIESM---PFQPDAIVWMTLLGA 577

Query: 616 CSHSGLVDVGVEI 628
           C   G +++  ++
Sbjct: 578 CRIHGNMELASDV 590



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 179/366 (48%), Gaps = 12/366 (3%)

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
           +KS    P   T  N L+    +  +   R +FD +P P  +SWN++L+++  +  H++A
Sbjct: 19  LKSGASSP---TPWNQLLTAYSATGLAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDA 75

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
            +L R M  RG+      L   L S AA    E G Q+ + S++     + + AS L+ +
Sbjct: 76  WRLLRAMHARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDV 135

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y+KC R   A RVF  +P  +IV WN++IAG + +    EA   F +M++    P   +F
Sbjct: 136 YAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTF 195

Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
           A +L++ A        RQ+H +I K G    +   +A I  Y +C  +  +R+ FD +  
Sbjct: 196 AVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGIES 255

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMI-ASGVKPDDITFVAILTACSHSGLVDVGVE 627
           ++ ++WN M+  YA +G  DEA+R +  M+  SG++PD  +F + ++ CS  G  D    
Sbjct: 256 RDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGR 315

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD-----DPVIWEVLLS 682
             +S+ +  G+E +      MI    R   F +  M+ D   C       D V W  +L+
Sbjct: 316 SIHSLVIKFGLEGVTPVCNAMIAMYTR---FADNCMMEDAYNCFSSLVFKDAVSWNSMLT 372

Query: 683 SCRLHA 688
               H 
Sbjct: 373 GYSHHG 378



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 119/544 (21%), Positives = 223/544 (40%), Gaps = 96/544 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  L +  +R GL D+ F  + L+++Y+KC     A+ +FD MP ++I SWNAI++    
Sbjct: 110 GAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTD 169

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S     A +LF E                               M   G VP   T A +
Sbjct: 170 SRKPAEAMELFLE-------------------------------MQRVGSVPDGTTFAVL 198

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                        R+ HG ++K G    +   NA ++ Y++C     +  +F+ +   + 
Sbjct: 199 LATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGIESRDL 258

Query: 187 VTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           +++ +M+   A      EA+  F R+M    +  D  S +S + VC+  GC         
Sbjct: 259 ISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGC--------- 309

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD---MDSAEVIFSNLPERS 302
            D++      G+ +H L IK G E    + N+++ MY +  D   M+ A   FS+L  + 
Sbjct: 310 -DDQ-----QGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKD 363

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRM----------------KSC-------------- 332
            VSWN M+ GY     S+ A++  + M                +SC              
Sbjct: 364 AVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHS 423

Query: 333 -----GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
                GF  ++  S +++    + G +   R+ F+     S   WN+M+  Y+Q    + 
Sbjct: 424 LVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQT 483

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV---HAASLKTASHIDNYVASG 444
              LF EM    V  D  T   ++++ +  G+++ G ++        K    +++Y    
Sbjct: 484 VTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACG- 542

Query: 445 LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN-----SLDIEAFMFFKQMRQ 498
            + +Y +  + + A+ +   +P + D + W +++    ++     + D+   +F  + RQ
Sbjct: 543 -VDLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELASDVARHLFVAEPRQ 601

Query: 499 NEMY 502
           +  Y
Sbjct: 602 HSTY 605


>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
          Length = 749

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 190/667 (28%), Positives = 339/667 (50%), Gaps = 77/667 (11%)

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIG-------LDKNIYVANALLSLYAKCGWTKHAVP 176
           A++  A + L  +  GRR H  ++          L  N  + N L+++Y +         
Sbjct: 48  AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGR--------- 98

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
                   N V++ ++++   +  R  +AL +F  M+R   + D  +L S +  C   G 
Sbjct: 99  --------NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG- 149

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
               DV             G+QVH   +K    +DL + N+L+ MY+KNG +D   ++F 
Sbjct: 150 ----DVGT-----------GRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFE 194

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-----------------KSCGF----- 334
            + ++ ++SW  +IAG+ Q+    +A+++ + M                 ++CG      
Sbjct: 195 RIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWE 254

Query: 335 --EPDEVTSI------NMLVAC------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYS 380
             E     SI      ++ V C       R  ++ + R  F  + +P + SWN+++++YS
Sbjct: 255 YGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYS 314

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
                 EA+ LF EM+  G++PD  T+  +L +C     L  G+ +H+  +K     D  
Sbjct: 315 VEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVS 374

Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
           V + L+ +Y++C     A  VFH I + D+V WNS++   + ++   E    F  + ++E
Sbjct: 375 VCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSE 434

Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
               + S   VLS+ A+L      +QVHA   K G V+D  + + LI+ Y KCG +  A 
Sbjct: 435 PSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAM 494

Query: 561 QFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS 619
           + F++M + ++  +W+ +I GYAQ GY  EA  L+  M + G++P+ +TF+ +LTACS  
Sbjct: 495 RLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRV 554

Query: 620 GLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEV 679
           G V+ G   ++ M+ ++G+ P  +H +C++D L RAG   EA   ID+MP + D ++W+ 
Sbjct: 555 GFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKT 614

Query: 680 LLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCI 739
           LL++ ++H ++ + KRAAE +  +DP +SA Y LL NIY++ G W++   +++ M  + +
Sbjct: 615 LLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGV 674

Query: 740 VKDPAYS 746
            K P  S
Sbjct: 675 KKSPGKS 681



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 159/597 (26%), Positives = 268/597 (44%), Gaps = 89/597 (14%)

Query: 80  MPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHG 139
           M  RN VSW ++I+A V+NG    AL +++ M   G       L S  +A T L DV  G
Sbjct: 95  MYGRNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTG 154

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           R+ H   +K     ++ V NAL+++Y+K G       +FE + + + +++ ++++G A+ 
Sbjct: 155 RQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQ 214

Query: 200 DRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
              +EAL++FR MI +     +     S    C   G                   +G+Q
Sbjct: 215 GFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSW----------------EYGEQ 258

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           +H L+IK   + DL++  SL DMYA+  ++DSA V F  +    +VSWN ++  Y  +  
Sbjct: 259 IHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGL 318

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVACV----------------------------- 349
            ++A+ L   M+  G  PD +T   +L ACV                             
Sbjct: 319 LSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNS 378

Query: 350 ------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                 R  D+ +  ++F  +    V +WN++L++ +Q  + +E +KLF  +       D
Sbjct: 379 LLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLD 438

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
           R +L  +LS+ A +G  E  KQVHA + K     D  +++ LI  Y+KC   + A R+F 
Sbjct: 439 RISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFE 498

Query: 464 RIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSF 522
            +    D+  W+S+I G +      EAF  F +MR   + P   +F  VL++C+++    
Sbjct: 499 IMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVN 558

Query: 523 QGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTW------ 574
           +G   ++ +E + G V      S ++++  + G +  A  F D M    + + W      
Sbjct: 559 EGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAA 618

Query: 575 ----NEMIHG------------------------YAQNGYGDEAVRLYKDMIASGVK 603
               N+M  G                        YA +G  +E  RL K M  SGVK
Sbjct: 619 SKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVK 675



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 196/397 (49%), Gaps = 26/397 (6%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
           +D+Y   ++     +  +L+ A   F  +   ++VSWN++++A    GL  +AL ++++M
Sbjct: 270 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 329

Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
            + G  P  IT+  +  A      + HGR  H  ++K+GLD ++ V N+LLS+YA+C   
Sbjct: 330 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 389

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
             A+ VF E+ + + VT+ ++++  A+ +   E L++F L+ +   S+D +SL++VL   
Sbjct: 390 SSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSAS 449

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A  G              +   V  +QVH    K G   D  LSN+L+D YAK G +D A
Sbjct: 450 AELG--------------YFEMV--KQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDA 493

Query: 292 EVIFSNLP-ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
             +F  +   R V SW+ +I GY Q   + +A +L  RM+S G  P+ VT I +L AC R
Sbjct: 494 MRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSR 553

Query: 351 SGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
            G +  G   +  M       P+    + ++   +++    EA     +M F   +PD  
Sbjct: 554 VGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPF---EPDII 610

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKT-ASHIDNYV 441
               +L++      +E GK+     L    SH   YV
Sbjct: 611 MWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYV 647



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/517 (22%), Positives = 230/517 (44%), Gaps = 69/517 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQ----HLFDKMPHKDIYSWNAILSAQC 65
           L + +LR+G   D F     +   ++  +  + +    H        D+   NA+++   
Sbjct: 122 LFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYS 181

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG-FVPTHITLA 124
           K+  ++  + LF+ + +++++SW ++I+   + G E +AL V+ +M  EG   P      
Sbjct: 182 KNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFG 241

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S F+A  A+   E+G + HGL IK  LD+++YV  +L  +YA+C     A   F  +  P
Sbjct: 242 SAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAP 301

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++ ++++  +    + EAL +F  M    +  D +++  +L  C      V  D   
Sbjct: 302 DLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCAC------VGRDAL- 354

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                     HG+ +H   +KLG + D+ + NSLL MYA+  D+ SA  +F  + ++ VV
Sbjct: 355 ---------YHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVV 405

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMK---------------------------------- 330
           +WN ++    Q     + ++L   +                                   
Sbjct: 406 TWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYA 465

Query: 331 -SCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSENHKEA 388
              G   D + S  ++    + G +     +F+ M  +  V SW++++  Y+Q    KEA
Sbjct: 466 FKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEA 525

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA------ASLKTASHIDNYVA 442
             LF  M+  G++P+  T   +L++C+ +G +  G   ++        + T  H      
Sbjct: 526 FDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREH-----C 580

Query: 443 SGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
           S ++ + ++  +   A     ++P E DI+ W +++A
Sbjct: 581 SCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLA 617



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 168/403 (41%), Gaps = 92/403 (22%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+L+H+++++ GL  D  +CN L+ +Y++C++  SA  +F ++  +D+ +WN+IL+A  +
Sbjct: 357 GRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQ 416

Query: 67  SDDLEFAYKLFDEM----PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
            +  E   KLF  +    P  + +S NN++S                             
Sbjct: 417 HNHPEEVLKLFSLLNKSEPSLDRISLNNVLS----------------------------- 447

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
                 AS  L   E  ++ H    K GL  +  ++N L+  YAKCG    A+ +FE M 
Sbjct: 448 ------ASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMG 501

Query: 183 EPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
              +V ++++++ G A+     EA ++F  M    +  + V+   VL  C+R G  V   
Sbjct: 502 NNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGF-VNEG 560

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
            +  S  +    +   + HC              + ++D+ A+ G +  A      +P  
Sbjct: 561 CYYYSIMEPEYGIVPTREHC--------------SCIVDLLARAGKLTEAANFIDQMP-- 604

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
                                           FEPD +    +L A     D++ G+   
Sbjct: 605 --------------------------------FEPDIIMWKTLLAASKMHNDMEMGKRAA 632

Query: 362 DSMPS--PSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGVK 401
           + + +  PS S+   +L + Y+ S N  E  +L + M+  GVK
Sbjct: 633 EGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVK 675



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 27/173 (15%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDG-------YVNDIFVGSALIEMYCKCGDIYGAR 560
           +A ++S+C++L S  QGR+VH  +              +  +G+ LI MY          
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMY---------- 96

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
                  G+N V+W  +I  + QNG   +A+ L+  M+ SG   D     + + AC+  G
Sbjct: 97  -------GRNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149

Query: 621 LVDVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
            V  G ++  ++++ + G + I+ +   ++    + G   +  ML + +  KD
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQN--ALVTMYSKNGLVDDGFMLFERIKDKD 200


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 207/713 (29%), Positives = 344/713 (48%), Gaps = 100/713 (14%)

Query: 119 THITLASVFKASTALLDVEHGRRCHG-LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           T + LAS+ ++     D+  GR  H  LV+      + ++AN L+++Y+ C     A+ +
Sbjct: 19  TTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRL 78

Query: 178 FEEMSEPNEVTFTAMMS---------------------GLAKTDRVVEAL---------- 206
           F  M   N V++T ++S                     G+A T  + E            
Sbjct: 79  FAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHT 138

Query: 207 -------EMFRLMIR----------KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
                      LM++             +  +V L+S+L  C R G           D +
Sbjct: 139 LAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAG-----------DLR 187

Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
             R +H +    L +     A   L+N L+ MY+   D+ SA  +F+ +P R+ VSW  +
Sbjct: 188 RGRLLHAR----LVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTL 243

Query: 310 IAGYGQKYQSTKAIELLQRMK----------------------------------SCGFE 335
           ++G  Q      A+     M+                                  S GF+
Sbjct: 244 VSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFD 303

Query: 336 PDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
            +   + N+     + G +     +FD MP     +W AM+  Y+++ + + A+  FR+M
Sbjct: 304 TELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDM 363

Query: 396 QFRG-VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +  G V  D+     +LS+   +      K +H    K    ++  V + LI +Y+K   
Sbjct: 364 KREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMD 423

Query: 455 NELAERVFHRIPE-LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS 513
            E A RV    P   ++V   SMI G        EA + + ++R+  + P +F+F++++ 
Sbjct: 424 VESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIK 483

Query: 514 SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
            CA  +   QG Q+HAQ+ K   + D FVGS L++MY KCG I  + Q F+ +  +  + 
Sbjct: 484 GCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIA 543

Query: 574 WNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
           WN +I+ +AQ+G+G EA++ +  MI SG++P+ I FV++LTACSH+GLVD G++ F SM+
Sbjct: 544 WNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMK 603

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
             HG+EP  +HY+C+ID  GRAG   EA   I EMP K +   W  LL +CR+  +  L 
Sbjct: 604 EAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELG 663

Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + AA+ L +L+P N+  +  L+ IY+SLG+W+D++AVR+LM ++ I K P +S
Sbjct: 664 EVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFS 716



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 225/501 (44%), Gaps = 91/501 (18%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+LLHA ++ +G     TFL N LI +YS C                             
Sbjct: 189 GRLLHARLVLSGAAAASTFLANHLITMYSHCA---------------------------- 220

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
              DL  A +LF  MP RN VSW  L+S L +N +   AL+ +  M   G  PT   L+S
Sbjct: 221 ---DLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSS 277

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             +A+ AL      R C      +G D  ++VA+ L  +Y+KCG    A  VF++M + +
Sbjct: 278 AARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKD 336

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V +TAM+ G AK   +  A+  FR M R+           ++G      C V S     
Sbjct: 337 AVAWTAMIDGYAKNGSLEAAVLSFRDMKREG----------LVGADQHVFCSVLSASGGL 386

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER-SVV 304
            D   S++     +HC   K GFE ++ + N+L+DMYAK+ D++SA  +    P   +VV
Sbjct: 387 KDGWLSKS-----IHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVV 441

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------- 349
           S   MI GY +     +A+ +   ++  G EP+E T  +M+  C                
Sbjct: 442 SGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQV 501

Query: 350 --------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                               + G I    ++F+ +   +  +WNA+++ ++Q  + +EAI
Sbjct: 502 IKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAI 561

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI----DNYVASGL 445
           + F  M + G++P+      +L++C+  G+++ G + +  S+K A  I    ++Y  S +
Sbjct: 562 QAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLK-YFYSMKEAHGIEPKEEHY--SCI 618

Query: 446 IGIYSKCQRNELAERVFHRIP 466
           I  Y +  R + A +    +P
Sbjct: 619 IDTYGRAGRLDEAYKFISEMP 639



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 167/723 (23%), Positives = 290/723 (40%), Gaps = 177/723 (24%)

Query: 7   GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+LLHA ++ +G     TFL N LI +YS C                             
Sbjct: 39  GRLLHARLVLSGAAAASTFLANHLITMYSHCA---------------------------- 70

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT--- 122
              DL  A +LF  MP RN VSW  L+S L +N +   AL+ +  M   G  PT +    
Sbjct: 71  ---DLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYET 127

Query: 123 ---------------------------------------------LASVFKASTALLDVE 137
                                                        LAS+ ++     D+ 
Sbjct: 128 KFHNTLGPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLR 187

Query: 138 HGRRCHG-LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGL 196
            GR  H  LV+      + ++AN L+++Y+ C     A+ +F  M   N V++T ++SGL
Sbjct: 188 RGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGL 247

Query: 197 AKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG 256
           ++     +AL  F  M R  V+    +LSS                 A      +R+   
Sbjct: 248 SQNLMHADALAAFAAMRRAGVAPTRFALSS-----------AARAAAALGAPLRARSCTA 296

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
                 +  +GF+ +L ++++L DMY+K G +  A  +F  +P++  V+W  MI GY + 
Sbjct: 297 ------SASVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 350

Query: 317 YQSTKAIELLQRMK------------------------------------SCGFEPDEVT 340
                A+   + MK                                      GFE +   
Sbjct: 351 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 410

Query: 341 SINMLVACVRSGDIKTGREMFDSMPSP-SVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
              ++    +S D+++   +    P   +V S  +M+  Y +++  +EA+ ++ E++ +G
Sbjct: 411 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 470

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           V+P+  T + ++  CA   +LE G Q+HA  +KT    D++V S L+ +Y KC    L+ 
Sbjct: 471 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 530

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           ++F+ I     + WN++I   + +    EA   F +M  + + P   +F ++L++C+   
Sbjct: 531 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS--- 587

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE--- 576
                   HA     G V++                  G + F+ M          E   
Sbjct: 588 --------HA-----GLVDE------------------GLKYFYSMKEAHGIEPKEEHYS 616

Query: 577 -MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG-VEIFNSMQL 634
            +I  Y + G  DEA +   +M    +KP+   + ++L AC   G  ++G V   N M+L
Sbjct: 617 CIIDTYGRAGRLDEAYKFISEM---PIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKL 673

Query: 635 DHG 637
           + G
Sbjct: 674 EPG 676



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 191/406 (47%), Gaps = 38/406 (9%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D+YS   +LS  C+         +FD+MP+++ V+W  +I    +NG  E A+  +  M 
Sbjct: 314 DMYSKCGLLSEACR---------VFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMK 364

Query: 113 NEGFVPT--HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
            EG V    H+   SV  AS  L D    +  H  V K G +  + V NAL+ +YAK   
Sbjct: 365 REGLVGADQHV-FCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMD 423

Query: 171 TKHAVPVFE-EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
            + A  V + +    N V+ T+M+ G  +TD V EAL ++  + R+ V  +  + SS++ 
Sbjct: 424 VESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMI- 482

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
               +GC +++ +             G Q+H   IK     D  + ++L+DMY K G + 
Sbjct: 483 ----KGCAMQALL-----------EQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 527

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV 349
            +  +F+ +  R+ ++WN +I  + Q     +AI+   RM   G  P+ +  +++L AC 
Sbjct: 528 LSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 587

Query: 350 RSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
            +G +  G + F SM       P    ++ ++ +Y ++    EA K   EM    +KP+ 
Sbjct: 588 HAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMP---IKPNA 644

Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
                +L +C   G  E G +V A +L      +  +   L GIY+
Sbjct: 645 YGWCSLLGACRMRGSKELG-EVAAQNLMKLEPGNTGIHVSLSGIYA 689


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 182/604 (30%), Positives = 310/604 (51%), Gaps = 65/604 (10%)

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
            N LL+LYAK    + A  +FEE+ + +  ++T ++SG A+     + L +F  M  + V
Sbjct: 324 GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGV 383

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
             +  +LS VL  C+       S+V   +D++  + +HG       ++ G + D  L+NS
Sbjct: 384 CPNQFTLSIVLKSCS-------SNV---NDSRIGKGIHGW-----ILRNGLDLDAVLNNS 428

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           +LD Y K      AE +F  + E+  VSWN+M++ Y                        
Sbjct: 429 ILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSY------------------------ 464

Query: 338 EVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                      ++ GD++   ++F  +P    +SWN M+    ++   + A++L  +M  
Sbjct: 465 -----------LQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVA 513

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
            G   ++ T +I L   +++ +L  GKQ+H   LK     D +V + LI +Y KC   E 
Sbjct: 514 AGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEK 573

Query: 458 AERVFHRIPE---------------LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           A  +F  +P+               ++ V W+SM++G   N    +A   F  M  +++ 
Sbjct: 574 ASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVE 633

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
             +F+  +V+S+CA       GRQVH  I+K G+  D+F+GS++I+MY KCG +  A   
Sbjct: 634 VDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLI 693

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           F+    +N V W  MI G A +G G EAVRL++ MI  G+ P++++FV +LTACSH+GL+
Sbjct: 694 FNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLL 753

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
           + G + F  M+  +G+ P  +H+TCM+D  GRAG  +E +  I          +W   LS
Sbjct: 754 EEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLS 813

Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
           SCR+H N+ +     ++L  L+P ++ PY L ++I ++  RW++   +R LM +  + K+
Sbjct: 814 SCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKN 873

Query: 743 PAYS 746
           P+ S
Sbjct: 874 PSQS 877



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 207/406 (50%), Gaps = 37/406 (9%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H  ILRNGL  D  L N +++ Y KC     A+ LF  M  KD  SWN ++S+  +
Sbjct: 407 GKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQ 466

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D++ +  LF ++P ++  SWN +I  L+RNG E  AL +  KM   G     +T +  
Sbjct: 467 IGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIA 526

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN- 185
              +++L  +  G++ H  V+K+G+  + +V N+L+ +Y KCG  + A  +F+ + + + 
Sbjct: 527 LVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESS 586

Query: 186 --------------EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
                          V++++M+SG  +  R  +AL+ F  MI   V +D  +L+SV+  C
Sbjct: 587 MMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSAC 646

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           A  G  +E                G+QVH    K+G   D+ L +S++DMY K G ++ A
Sbjct: 647 ASAGV-LE---------------LGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDA 690

Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
            +IF+   +R+VV W  MI+G     Q  +A+ L + M + G  P+EV+ + +L AC  +
Sbjct: 691 WLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHA 750

Query: 352 GDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLF 392
           G ++ G + F  M       P    +  M+  Y ++    E IK F
Sbjct: 751 GLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNE-IKEF 795



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 210/436 (48%), Gaps = 74/436 (16%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +L+   KS +LE A+K+F+E+P+ +V SW  LIS   R GL    L ++ KM ++G  
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384

Query: 118 PTHITLASVFKA-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           P   TL+ V K+ S+ + D   G+  HG +++ GLD +  + N++L  Y KC    +A  
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F  M+E + V++  MMS   +   + +++++FR +  K    D+ S ++++    R GC
Sbjct: 445 LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGK----DAASWNTMIDGLMRNGC 500

Query: 237 -GVESDVFAQ------SDNKFSRNVH------------GQQVHCLTIKLGFEADLHLSNS 277
             V  ++  +      + NK + ++             G+Q+H   +K+G   D  + NS
Sbjct: 501 ERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNS 560

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERS---------------VVSWNVMIAGYGQKYQSTKA 322
           L+DMY K G+M+ A VIF +LP+ S                VSW+ M++GY Q  +   A
Sbjct: 561 LIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDA 620

Query: 323 IELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----------------------- 359
           ++    M     E D+ T  +++ AC  +G ++ GR+                       
Sbjct: 621 LKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDM 680

Query: 360 ------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
                       +F+     +V  W +M+S  +     +EA++LF  M   G+ P+  + 
Sbjct: 681 YVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSF 740

Query: 408 AIILSSCAAMGILESG 423
             +L++C+  G+LE G
Sbjct: 741 VGVLTACSHAGLLEEG 756



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 23/237 (9%)

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
           +   +F      +  YP    F++  S      +S     +HA++ K+G V     G+ L
Sbjct: 273 VGGLLFLGFSLSSYFYPPLXYFSSTFSDSMNYPNS---EVLHAKLIKNGCVG--IRGNHL 327

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
           + +Y K  ++  A + F+ +   +  +W  +I G+A+ G   + + L+  M   GV P+ 
Sbjct: 328 LNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQ 387

Query: 607 ITFVAILTACS---HSGLVDVGVE---IFNSMQLDHGV-EPILDHYTCMIDCLGRAGHFH 659
            T   +L +CS   +   +  G+    + N + LD  +   ILD+Y        +   F 
Sbjct: 388 FTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYV-------KCRCFG 440

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
            AE L   M  K D V W +++SS   +  +   +++ +   +L  K++A ++ + +
Sbjct: 441 YAEKLFGLMAEK-DTVSWNIMMSS---YLQIGDMQKSVDLFRQLPGKDAASWNTMID 493


>gi|413915870|gb|AFW55802.1| hypothetical protein ZEAMMB73_686110 [Zea mays]
          Length = 810

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 216/741 (29%), Positives = 340/741 (45%), Gaps = 74/741 (9%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D Y+ N +L    K   L  A  +FDE P RN V+W  ++SA  R G     L ++  M 
Sbjct: 93  DTYTSNQLLIHYSKRGQLASALDVFDETPSRNHVTWTAIVSAAARGGAPGLGLRLFASML 152

Query: 113 NEGFVPTHITLASVFKASTALL--DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
             GF P    LAS   A    +  DV+ G   HGL ++  L  N YV ++L+ +YAK G 
Sbjct: 153 RSGFCPNEFALASALGACCQWVAADVKLGLSLHGLAVRAVLHGNPYVGSSLMLVYAKHGR 212

Query: 171 TKHAVPVFEEMSEPNE--VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
              A  VF  ++  +     + AM+ G        +A     LM                
Sbjct: 213 VAAAERVFAGIASGSRDVACWNAMLEGYVANGHGYDATRTVALM---------------- 256

Query: 229 GVCAREGCGVESDVF----AQSDNKFSRNVH-GQQVHCLTIKLGFEA-DLHLSNSLLDMY 282
                 G G+  D+F    A   +  +R+++ G+QVH L ++   E+ +  + N+L+DMY
Sbjct: 257 -----HGSGIAPDMFTYISAAKASWIARDLYFGRQVHGLVVRSVLESNNTSVMNALMDMY 311

Query: 283 AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT-- 340
            K G  ++A  IF  +  +  VSWN MI+G   +     A +    M  CG   ++VT  
Sbjct: 312 FKAGQKETAADIFGKIRWKDTVSWNTMISGLEDE---RAAADCFVDMARCGCRSNQVTFS 368

Query: 341 --------------------------------SINMLVACVRSGDIKTGREMFDSMPSPS 368
                                           +INML  C   G +      F  +   +
Sbjct: 369 VMLRLSGASLGLQIFGLAYRHGYSDNVLVANAAINMLSRC---GLLSCAYGYFCDLGVRN 425

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
           V +WN M++ Y       +A++LFR +   G +PD  T   +LS+        + +QVHA
Sbjct: 426 VVTWNEMIAGYGLHGCSGDAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQVHA 485

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAE-RVFHRIPELDIVCWNSMIAGLSLNSLDI 487
           + LK       +V++ LI   +    + L   ++     E+D+V W   I+    + L  
Sbjct: 486 SVLKQGFASCQFVSTSLIKAKAALGSSVLGPLKIIQDAGEMDLVSWGVAISAFVKHGLGQ 545

Query: 488 EAFMFFKQMRQN-EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
           EA   F   R +    P +F   T+L++CA  +   Q R +H+ + + G+   + V SAL
Sbjct: 546 EALSLFNSCRVDCPEKPDEFILGTILNACANAALIRQCRCIHSLVVRTGHSKHLCVSSAL 605

Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV-KPD 605
           ++ Y KCGDI  A+  F  +  K+ + +N M+  YA +G   E + LY++M    +  P 
Sbjct: 606 VDAYAKCGDITAAKGAFATVSTKDAIVYNTMLTAYANHGLIREVLSLYQEMTQLQLAAPT 665

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
             TFVA ++ACSH GLV+ G  +F+SM   HG+ P   +Y C+ID L R G   EA  +I
Sbjct: 666 PATFVAAISACSHLGLVEQGKLLFSSMLSAHGMNPTRANYACLIDLLARRGLLEEATGVI 725

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
             MP +  P +W  L++ CR+H N  L   A+E++ R+ P +   Y  L+++Y+  G W 
Sbjct: 726 QAMPFQPWPAVWRSLMNGCRIHGNKELGLLASEQILRMAPNSDGAYVSLSHVYAEDGDWR 785

Query: 726 DLRAVRELMSENCIVKDPAYS 746
                R  M+EN + K   YS
Sbjct: 786 SAEDARRKMAENQVHKAQGYS 806



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 187/404 (46%), Gaps = 54/404 (13%)

Query: 256 GQQVHCLTIKLGFE-ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           G Q+H   IKLG   AD + SN LL  Y+K G + SA  +F   P R+ V+W  +++   
Sbjct: 77  GSQLHASGIKLGVVFADTYTSNQLLIHYSKRGQLASALDVFDETPSRNHVTWTAIVSAAA 136

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR--SGDIKTG--------------- 357
           +       + L   M   GF P+E    + L AC +  + D+K G               
Sbjct: 137 RGGAPGLGLRLFASMLRSGFCPNEFALASALGACCQWVAADVKLGLSLHGLAVRAVLHGN 196

Query: 358 --------------------REMFDSMPSPS--VSSWNAMLSSYSQSENHKEAIKLFREM 395
                                 +F  + S S  V+ WNAML  Y  + +  +A +    M
Sbjct: 197 PYVGSSLMLVYAKHGRVAAAERVFAGIASGSRDVACWNAMLEGYVANGHGYDATRTVALM 256

Query: 396 QFRGVKPDRTTLAIILSSCAAMGI---LESGKQVHAASLKTASHIDNY-VASGLIGIYSK 451
              G+ PD  T    +S+  A  I   L  G+QVH   +++    +N  V + L+ +Y K
Sbjct: 257 HGSGIAPDMFTY---ISAAKASWIARDLYFGRQVHGLVVRSVLESNNTSVMNALMDMYFK 313

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
             + E A  +F +I   D V WN+MI+GL       + F+    M +      Q +F+ +
Sbjct: 314 AGQKETAADIFGKIRWKDTVSWNTMISGLEDERAAADCFV---DMARCGCRSNQVTFSVM 370

Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
           L    +LS +  G Q+     + GY +++ V +A I M  +CG +  A  +F  +  +N 
Sbjct: 371 L----RLSGASLGLQIFGLAYRHGYSDNVLVANAAINMLSRCGLLSCAYGYFCDLGVRNV 426

Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
           VTWNEMI GY  +G   +A+RL++ ++  G +PD+ T+ A+L+A
Sbjct: 427 VTWNEMIAGYGLHGCSGDAMRLFRSLVCFGARPDEFTYPAVLSA 470



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 224/516 (43%), Gaps = 64/516 (12%)

Query: 51  HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPE--RNVVSWNNLISALVRNGLEEKALSVY 108
           H + Y  ++++    K   +  A ++F  +    R+V  WN ++   V NG    A    
Sbjct: 194 HGNPYVGSSLMLVYAKHGRVAAAERVFAGIASGSRDVACWNAMLEGYVANGHGYDATRTV 253

Query: 109 NKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAK 167
             M   G  P   T  S  KAS    D+  GR+ HGLV++  L+ N   V NAL+ +Y K
Sbjct: 254 ALMHGSGIAPDMFTYISAAKASWIARDLYFGRQVHGLVVRSVLESNNTSVMNALMDMYFK 313

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
            G  + A  +F ++   + V++  M+SGL + +R   A + F  M R     + V+ S +
Sbjct: 314 AGQKETAADIFGKIRWKDTVSWNTMISGL-EDERA--AADCFVDMARCGCRSNQVTFSVM 370

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           L                    + S    G Q+  L  + G+  ++ ++N+ ++M ++ G 
Sbjct: 371 L--------------------RLSGASLGLQIFGLAYRHGYSDNVLVANAAINMLSRCGL 410

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           +  A   F +L  R+VV+WN MIAGYG    S  A+ L + +   G  PDE T   +L A
Sbjct: 411 LSCAYGYFCDLGVRNVVTWNEMIAGYGLHGCSGDAMRLFRSLVCFGARPDEFTYPAVLSA 470

Query: 348 CVRSGD--------------------------IKTGREMFDSMPSP----------SVSS 371
             +  D                          IK    +  S+  P           + S
Sbjct: 471 FQQDHDARNHEQVHASVLKQGFASCQFVSTSLIKAKAALGSSVLGPLKIIQDAGEMDLVS 530

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           W   +S++ +    +EA+ LF   +     KPD   L  IL++CA   ++   + +H+  
Sbjct: 531 WGVAISAFVKHGLGQEALSLFNSCRVDCPEKPDEFILGTILNACANAALIRQCRCIHSLV 590

Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
           ++T       V+S L+  Y+KC     A+  F  +   D + +N+M+   + + L  E  
Sbjct: 591 VRTGHSKHLCVSSALVDAYAKCGDITAAKGAFATVSTKDAIVYNTMLTAYANHGLIREVL 650

Query: 491 MFFKQMRQNEM-YPTQFSFATVLSSCAKLSSSFQGR 525
             +++M Q ++  PT  +F   +S+C+ L    QG+
Sbjct: 651 SLYQEMTQLQLAAPTPATFVAAISACSHLGLVEQGK 686



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 19/206 (9%)

Query: 422 SGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAER--VFHRIPELDIVCWNSMIA 478
           +G Q+HA+ +K      D Y ++ L+  YSK  R +LA    VF   P  + V W ++++
Sbjct: 76  TGSQLHASGIKLGVVFADTYTSNQLLIHYSK--RGQLASALDVFDETPSRNHVTWTAIVS 133

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC-------AKLSSSFQGRQVHAQI 531
             +           F  M ++   P +F+ A+ L +C        KL  S  G  V A +
Sbjct: 134 AAARGGAPGLGLRLFASMLRSGFCPNEFALASALGACCQWVAADVKLGLSLHGLAVRAVL 193

Query: 532 EKDGYVNDIFVGSALIEMYCKCGDIYGA-RQFFDMMHG-KNTVTWNEMIHGYAQNGYGDE 589
             + Y     VGS+L+ +Y K G +  A R F  +  G ++   WN M+ GY  NG+G +
Sbjct: 194 HGNPY-----VGSSLMLVYAKHGRVAAAERVFAGIASGSRDVACWNAMLEGYVANGHGYD 248

Query: 590 AVRLYKDMIASGVKPDDITFVAILTA 615
           A R    M  SG+ PD  T+++   A
Sbjct: 249 ATRTVALMHGSGIAPDMFTYISAAKA 274


>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 173/516 (33%), Positives = 266/516 (51%), Gaps = 37/516 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G Q+HCL +K G  ++  +SNS++ MY K  D+ SA  +F  +P R  ++WN +I GY  
Sbjct: 70  GTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLH 129

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------------- 360
                +A+E L  +   G  P      +++  C R    K GR++               
Sbjct: 130 NGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMF 189

Query: 361 ---------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                                FD M   +V SW  M+S     +++ EA   FR MQ  G
Sbjct: 190 LSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEG 249

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC-QRNELA 458
           V P+R T   +LS+CA  G ++ GK++H  + +         +S L+ +Y +C +   LA
Sbjct: 250 VCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLA 309

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
           E +F      D+V W+S+I   S      +A   F +MR  E+ P   +   V+S+C  L
Sbjct: 310 ELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNL 369

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           SS   G  +H  I K G+   I VG+ALI MY KCG + G+R+ F  M  ++ VTW+ +I
Sbjct: 370 SSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLI 429

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
             Y  +G G++A++++ +M   GVKPD ITF+A+L+AC+H+GLV  G  IF  ++ D  +
Sbjct: 430 SAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRADCEI 489

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
              ++HY C++D LGR+G    A  +   MP K    IW  L+S+C+LH  + +A+  A 
Sbjct: 490 PLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAP 549

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
           +L R +P N+  Y+LL  IY+  G W D   VRE M
Sbjct: 550 QLIRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAM 585



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 242/494 (48%), Gaps = 65/494 (13%)

Query: 51  HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
           H +    N+I++   K  D+  A ++FD MP R+ ++WN+LI+  + NG  E+AL   N 
Sbjct: 83  HSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEALND 142

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI---KIGLDKNIYVANALLSLYAK 167
           +   G VP    LASV       +  + GR+ H LV+   +IG  ++++++ AL+  Y +
Sbjct: 143 VYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIG--QSMFLSTALVDFYFR 200

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
           CG +  A+ VF+ M   N V++T M+SG        EA   FR M  + V  + V+  ++
Sbjct: 201 CGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIAL 260

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           L  CA  G       F +         HG+++H    + GFE+    S++L++MY + G+
Sbjct: 261 LSACAEPG-------FVK---------HGKEIHGYAFRHGFESCPSFSSALVNMYCQCGE 304

Query: 288 -MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
            M  AE+IF     R VV W+ +I  + ++  S KA++L  +M++   EP+ VT + ++ 
Sbjct: 305 PMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVIS 364

Query: 347 ACVRSGDIKTG-----------------------------------REMFDSMPSPSVSS 371
           AC     +K G                                   R+MF  MP+    +
Sbjct: 365 ACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVT 424

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA--- 428
           W++++S+Y      ++A+++F EM  RGVKPD  T   +LS+C   G++  G+++     
Sbjct: 425 WSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVR 484

Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNS-LD 486
           A  +    I++Y    L+ +  +  + E A  +   +P +     W+S+++   L+  LD
Sbjct: 485 ADCEIPLTIEHYAC--LVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLD 542

Query: 487 IEAFMFFKQMRQNE 500
           I A M   Q+ ++E
Sbjct: 543 I-AEMLAPQLIRSE 555



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 251/555 (45%), Gaps = 59/555 (10%)

Query: 87  SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           S +N I + +  GL  + L +++++   G       L SV KAS++      G + H L 
Sbjct: 18  SPSNQIKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQLHCLA 77

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           +K G      V+N+++++Y K      A  VF+ M   + +T+ ++++G      + EAL
Sbjct: 78  LKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEAL 137

Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI-- 264
           E    +    +      L+SV+ +C R    + S +             G+Q+H L +  
Sbjct: 138 EALNDVYLLGLVPKPELLASVVSMCGRR---MGSKI-------------GRQIHALVVVN 181

Query: 265 -KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
            ++G    + LS +L+D Y + GD   A  +F  +  ++VVSW  MI+G        +A 
Sbjct: 182 ERIG--QSMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAF 239

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------FDSMPSPS------- 368
              + M++ G  P+ VTSI +L AC   G +K G+E+        F+S PS S       
Sbjct: 240 ACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMY 299

Query: 369 ---------------------VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTL 407
                                V  W++++ S+S+  +  +A+KLF +M+   ++P+  TL
Sbjct: 300 CQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTL 359

Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
             ++S+C  +  L+ G  +H    K        V + LI +Y+KC     + ++F  +P 
Sbjct: 360 LAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPN 419

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
            D V W+S+I+   L+    +A   F +M +  + P   +F  VLS+C       +G+++
Sbjct: 420 RDNVTWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRI 479

Query: 528 HAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV-TWNEMIHGYAQNG 585
             Q+  D  +   I   + L+++  + G +  A +    M  K +   W+ ++     +G
Sbjct: 480 FKQVRADCEIPLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHG 539

Query: 586 YGDEAVRLYKDMIAS 600
             D A  L   +I S
Sbjct: 540 RLDIAEMLAPQLIRS 554



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 157/322 (48%), Gaps = 8/322 (2%)

Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
           +P+ SS +  + S+     + + ++LF E+   G       L  ++ + ++      G Q
Sbjct: 13  APTCSSPSNQIKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQ 72

Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
           +H  +LKT SH +  V++ +I +Y K      A +VF  +P  D + WNS+I G   N  
Sbjct: 73  LHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGY 132

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI---EKDGYVNDIFV 542
             EA      +    + P     A+V+S C +   S  GRQ+HA +   E+ G    +F+
Sbjct: 133 LEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIG--QSMFL 190

Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
            +AL++ Y +CGD   A + FD M  KN V+W  MI G   +   DEA   ++ M A GV
Sbjct: 191 STALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGV 250

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH-FHEA 661
            P+ +T +A+L+AC+  G V  G EI +     HG E      + +++   + G   H A
Sbjct: 251 CPNRVTSIALLSACAEPGFVKHGKEI-HGYAFRHGFESCPSFSSALVNMYCQCGEPMHLA 309

Query: 662 EMLIDEMPCKDDPVIWEVLLSS 683
           E LI E     D V+W  ++ S
Sbjct: 310 E-LIFEGSSFRDVVLWSSIIGS 330



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 47/366 (12%)

Query: 20  FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH-------KDIYSW-------------NA 59
           +D+ F C R ++    C N  ++  L             K+I+ +             +A
Sbjct: 235 YDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSA 294

Query: 60  ILSAQCK-SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
           +++  C+  + +  A  +F+    R+VV W+++I +  R G   KAL ++NKM  E   P
Sbjct: 295 LVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEP 354

Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
            ++TL +V  A T L  ++HG   HG + K G   +I V NAL+++YAKCG    +  +F
Sbjct: 355 NYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMF 414

Query: 179 EEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
            EM   + VT+++++S         +AL++F  M  + V  D+++  +VL  C   G   
Sbjct: 415 LEMPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVA 474

Query: 239 ESD-VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS----------------NSLLDM 281
           E   +F Q        +  +   CL   LG    L  +                +SL+  
Sbjct: 475 EGQRIFKQVRADCEIPLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSA 534

Query: 282 YAKNGDMDSAEVIFSNL----PERS--VVSWNVMIAGYGQKYQSTKAIEL--LQRMKSC- 332
              +G +D AE++   L    P  +      N + A +G    + +  E   LQ++K C 
Sbjct: 535 CKLHGRLDIAEMLAPQLIRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCY 594

Query: 333 GFEPDE 338
           GF   E
Sbjct: 595 GFSRIE 600



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 5/187 (2%)

Query: 507 SFATVLSSCAKLSSSFQ----GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           S +  L S  K SSS Q    G Q+H    K G  ++  V +++I MY K  D+  ARQ 
Sbjct: 49  SISFFLPSVIKASSSAQCHTFGTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQV 108

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
           FD M  ++ +TWN +I+GY  NGY +EA+    D+   G+ P      ++++ C      
Sbjct: 109 FDTMPHRDPITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGS 168

Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            +G +I   + ++  +   +   T ++D   R G    A  + D M  K + V W  ++S
Sbjct: 169 KIGRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGMEVK-NVVSWTTMIS 227

Query: 683 SCRLHAN 689
            C  H +
Sbjct: 228 GCIAHQD 234



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 62/116 (53%), Gaps = 4/116 (3%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH +I + G      + N LI +Y+KC   + ++ +F +MP++D  +W++++SA      
Sbjct: 378 LHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLHGC 437

Query: 70  LEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
            E A ++F EM ER V    +++  ++SA    GL  +   ++ ++  +  +P  I
Sbjct: 438 GEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRADCEIPLTI 493


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 186/636 (29%), Positives = 310/636 (48%), Gaps = 59/636 (9%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
           ++++ N LL+ Y + G    A  + +EM   N V+F  ++   ++      +LE      
Sbjct: 42  SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARAR 101

Query: 214 RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
           R  V +D  S ++ L  C+R G                    G+ VH L I  G  + + 
Sbjct: 102 RAGVDVDRFSYAAALAACSRAG----------------HLRAGRAVHALAILDGLSSGVF 145

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY---GQKYQSTKAIELLQR-- 328
           +SNSL+ MY+K G+M  A  +F    ER  VSWN +++GY   G + +  +   +++R  
Sbjct: 146 VSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGG 205

Query: 329 -----------MKSCGFEPDEVTSINMLV-ACV--------------------RSGDIKT 356
                      +K C    D    I   V  CV                    + G +  
Sbjct: 206 MGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVE 265

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSEN------HKEAIKLFREMQFRGVKPDRTTLAII 410
              +F S+  P+V  +N M++ + ++E         EA+ L+ E+Q RG++P   T + +
Sbjct: 266 AAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSV 325

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           L +C   G LE GKQ+H   +K     D+++ S LI +Y      E   R F   P+ DI
Sbjct: 326 LRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDI 385

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           V W +M++G   N L  +A   F +     + P  F+ ++V+++CA L+ +  G Q+   
Sbjct: 386 VTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCF 445

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
             K G+     +G++ + MY + GD+  A + F  M   + V+W+ +I  +AQ+G   +A
Sbjct: 446 ATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDA 505

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           +  + +M+ + V P++ITF+ +LTACSH GLVD G+  + +M  D+G+ P + H TC++D
Sbjct: 506 LHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVD 565

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            LGRAG   +AE  I       DPVIW  LL+SCR+H ++   +  A  +  L+P +SA 
Sbjct: 566 LLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSAS 625

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y +L N+Y   G        R+LM +  + K+P  S
Sbjct: 626 YVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLS 661



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 150/574 (26%), Positives = 279/574 (48%), Gaps = 61/574 (10%)

Query: 50  PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN 109
           P   ++  N +L+A C+      A +L DEMP RN VS+N LI A  R GL   +L    
Sbjct: 39  PAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLA 98

Query: 110 KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           +    G      + A+   A +    +  GR  H L I  GL   ++V+N+L+S+Y+KCG
Sbjct: 99  RARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCG 158

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
               A  VF+   E ++V++ +++SG  +     E + +F +M R  + ++S +L SV+ 
Sbjct: 159 EMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK 218

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            C+  G G   D+              + VH   IK G ++D+ L ++++DMYAK G + 
Sbjct: 219 CCSGRGDGT-MDI-------------AEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALV 264

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQ------KYQSTKAIELLQRMKSCGFEPDEVTSIN 343
            A  +F ++ E +VV +N MIAG+ +      K  +++A+ L   ++S G +P E T  +
Sbjct: 265 EAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSS 324

Query: 344 MLVACVRSGDIKTGREM-----------------------------------FDSMPSPS 368
           +L AC  +G ++ G+++                                   F S P   
Sbjct: 325 VLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHD 384

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
           + +W AM+S   Q+E H++A+ LF E    G+KPD  T++ ++++CA++ +  +G+Q+  
Sbjct: 385 IVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQC 444

Query: 429 ASLKTASHIDNYVASG--LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
               T S  D +   G   + +Y++    + A R F  +   D+V W+++I+  + +   
Sbjct: 445 --FATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCA 502

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSA 545
            +A  FF +M   ++ P + +F  VL++C+      +G + +  + KD G    I   + 
Sbjct: 503 RDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTC 562

Query: 546 LIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEMI 578
           ++++  + G +  A  F  + +   + V W  ++
Sbjct: 563 VVDLLGRAGRLADAEAFISNSIFHADPVIWRSLL 596



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 141/558 (25%), Positives = 234/558 (41%), Gaps = 106/558 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +HA  + +GL    F+ N L+ +YSKC     A+ +FD    +D  SW        
Sbjct: 127 AGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW-------- 178

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                  N+L+S  VR G  E+ + V+  M   G       L S
Sbjct: 179 -----------------------NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGS 215

Query: 126 VFKASTALLD--VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           V K  +   D  ++     HG VIK GLD ++++ +A++ +YAK G    A  +F  + E
Sbjct: 216 VIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQE 275

Query: 184 PNEVTFTAMMSGLAKTDRVV------EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           PN V F  M++G  +T+ V+      EAL ++  +  + +     + SSVL  C   G  
Sbjct: 276 PNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAG-- 333

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                      +F + +HGQ      IK  F+ D  + ++L+D+Y  +G M+     F +
Sbjct: 334 ---------YLEFGKQIHGQ-----VIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRS 379

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
            P+  +V+W  M++G  Q     KA+ L       G +PD  T  +++ AC         
Sbjct: 380 SPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAG 439

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      RSGD+      F  M S  V SW+A++S ++Q 
Sbjct: 440 EQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQH 499

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK------TASH 436
              ++A+  F EM    V P+  T   +L++C+  G+++ G + +    K      T  H
Sbjct: 500 GCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKH 559

Query: 437 IDNYVASGLIGIYSKCQRNE--LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
               V   L+G   +    E  ++  +FH  P    V W S++A   ++  D+E      
Sbjct: 560 CTCVV--DLLGRAGRLADAEAFISNSIFHADP----VIWRSLLASCRIHR-DLERGQLVA 612

Query: 495 QMRQNEMYPTQFSFATVL 512
             R  E+ PT  +   +L
Sbjct: 613 N-RIMELEPTSSASYVIL 629



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 203/435 (46%), Gaps = 39/435 (8%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRN----GLE--EKALS 106
           D++  +A++    K   L  A  LF  + E NVV +N +I+   R     G E   +AL+
Sbjct: 246 DVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALT 305

Query: 107 VYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYA 166
           +Y+++ + G  PT  T +SV +A      +E G++ HG VIK    ++ ++ +AL+ LY 
Sbjct: 306 LYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYF 365

Query: 167 KCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS 226
             G  +     F    + + VT+TAM+SG  + +   +AL +F   +   +  D  ++SS
Sbjct: 366 NSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISS 425

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           V+  CA       S   A++         G+Q+ C   K GF+    + NS + MYA++G
Sbjct: 426 VMNACA-------SLAVARA---------GEQIQCFATKSGFDRFTVMGNSCVHMYARSG 469

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
           D+D+A   F  +    VVSW+ +I+ + Q   +  A+     M      P+E+T + +L 
Sbjct: 470 DVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLT 529

Query: 347 ACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           AC   G +  G   +++M      SP++     ++    ++    +A        F    
Sbjct: 530 ACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHA-- 587

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLK-----TASHI---DNYVASGLIGIYSKCQ 453
            D      +L+SC     LE G+ V    ++     +AS++   + Y+ +G + + SK  
Sbjct: 588 -DPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASK-T 645

Query: 454 RNELAERVFHRIPEL 468
           R+ + +R   + P L
Sbjct: 646 RDLMKQRGVKKEPGL 660


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 173/544 (31%), Positives = 285/544 (52%), Gaps = 39/544 (7%)

Query: 237 GVESDVF-AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
           G+ SD F A   +  +     +Q+H   + LG +    L   L+   +  GD+  A  +F
Sbjct: 17  GIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------- 348
            +LP   +  WN +I GY +      A+ +   M+     PD  T  ++L AC       
Sbjct: 77  DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136

Query: 349 -------------------VRSGDIK---------TGREMFDSMPSP--SVSSWNAMLSS 378
                              V++G I          + R +F+ +P P  ++ SW A++S+
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           Y+Q+    EA+++F +M+   VKPD   L  +L++   +  L+ G+ +HA+ +K    I+
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
             +   L  +Y+KC +   A+ +F ++   +++ WN+MI+G + N    EA   F +M  
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
            ++ P   S  + +S+CA++ S  Q R ++  + +  Y +D+F+ SALI+M+ KCG + G
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           AR  FD    ++ V W+ MI GY  +G   EA+ LY+ M   GV P+D+TF+ +L AC+H
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
           SG+V  G   FN M  DH + P   HY C+ID LGRAGH  +A  +I  MP +    +W 
Sbjct: 437 SGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWG 495

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC 738
            LLS+C+ H +V L + AA++LF +DP N+  Y  L+N+Y++   WD +  VR  M E  
Sbjct: 496 ALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKG 555

Query: 739 IVKD 742
           + KD
Sbjct: 556 LNKD 559



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 214/422 (50%), Gaps = 52/422 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA + R G   D F+ N LI LY+KC    SA+ +F+ +P                
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP---------------- 181

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        +PER +VSW  ++SA  +NG   +AL ++++M      P  + L SV
Sbjct: 182 -------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSV 228

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A T L D++ GR  H  V+K+GL+    +  +L ++YAKCG    A  +F++M  PN 
Sbjct: 229 LNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNL 288

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           + + AM+SG AK     EA++MF  MI K V  D++S++S +  CA+ G   ++      
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA------ 342

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                     + ++    +  +  D+ +S++L+DM+AK G ++ A ++F    +R VV W
Sbjct: 343 ----------RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVW 392

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           + MI GYG   ++ +AI L + M+  G  P++VT + +L+AC  SG ++ G   F+ M  
Sbjct: 393 SAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD 452

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
              +P    +  ++    ++ +  +A ++ + M    V+P  T    +LS+C     +E 
Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---VQPGVTVWGALLSACKKHRHVEL 509

Query: 423 GK 424
           G+
Sbjct: 510 GE 511



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 199/413 (48%), Gaps = 53/413 (12%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           ++ H  ++ +GL  + ++   L+   +  G    A  VF+++  P    + A++ G ++ 
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
           +   +AL M+  M    VS DS +   +L  C+                  S    G+ V
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACS----------------GLSHLQMGRFV 141

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN--LPERSVVSWNVMIAGYGQKY 317
           H    +LGF+AD+ + N L+ +YAK   + SA  +F    LPER++VSW  +++ Y Q  
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------ 359
           +  +A+E+  +M+    +PD V  +++L A     D+K GR                   
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261

Query: 360 -----------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                            +FD M SP++  WNAM+S Y+++   +EAI +F EM  + V+P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  ++   +S+CA +G LE  + ++    ++    D +++S LI +++KC   E A  VF
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
            R  + D+V W++MI G  L+    EA   ++ M +  ++P   +F  +L +C
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 183/401 (45%), Gaps = 53/401 (13%)

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           ++ A     D+ FA ++FD++P   +  WN +I    RN   + AL +Y+ M      P 
Sbjct: 59  LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             T   + KA + L  ++ GR  H  V ++G D +++V N L++LYAKC     A  VFE
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178

Query: 180 EMSEPNE--VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
            +  P    V++TA++S  A+    +EALE+F  M +  V  D V+L SVL         
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT----- 233

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                    D K      G+ +H   +K+G E +  L  SL  MYAK G + +A+++F  
Sbjct: 234 ------CLQDLK-----QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +   +++ WN MI+GY +   + +AI++   M +    PD ++  + + AC + G ++  
Sbjct: 283 MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA 342

Query: 358 REM-----------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
           R M                                   FD      V  W+AM+  Y   
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLH 402

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
              +EAI L+R M+  GV P+  T   +L +C   G++  G
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443


>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
 gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
          Length = 849

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 182/625 (29%), Positives = 309/625 (49%), Gaps = 52/625 (8%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           N ++  Y KCG  K A  VF  +  PN  ++T +++  A+       LE+ R M    V 
Sbjct: 120 NCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVW 179

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            ++V+L++V+G  +  G   E+           R +H +     T +L +  D+ L  +L
Sbjct: 180 PNAVTLATVIGAVSELGNWDEA-----------RKIHARAA--ATCQLTY--DVVLVTAL 224

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
           +DMYAK GD+  AEV+F     + +   N MI+ Y Q   +  A+    R++  G +P++
Sbjct: 225 IDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQ 284

Query: 339 VTSINMLVACV-----------------------------------RSGDIKTGREMFDS 363
           VT   +  AC                                    R G ++  R +FD 
Sbjct: 285 VTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDR 344

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           MP  +V +WN M++ Y+Q     EA++L+  M+  GV+PD  T   +L SC+    L +G
Sbjct: 345 MPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAG 404

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR--IPELDIVCWNSMIAGLS 481
           + +H   +         V S LI +YS C     A  VFH+       ++ W +M+  L+
Sbjct: 405 RDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALT 464

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
            N     A   F++M    +     +F + + +C+ + +  +G  +  ++   G++ D+ 
Sbjct: 465 RNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVV 524

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           +G++LI +Y KCG +  A + F  +  KN VTWN ++   +QNG    +  L ++M   G
Sbjct: 525 LGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDG 584

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
            +P+++T + +L  CSH+GLV   V  F SM   H + P  +HY C++D LGR+G   E 
Sbjct: 585 AQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEV 644

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           E  I   P   D V+W  LL SC +H++V    RAA  +  LDPKN++PY LL+N+++++
Sbjct: 645 EAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAI 704

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           G  D ++++ +L  E  + K+ + S
Sbjct: 705 GMLDAVKSLAKLAGERAMKKEQSRS 729



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/548 (25%), Positives = 244/548 (44%), Gaps = 86/548 (15%)

Query: 8   KLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           K + AHI  +  F  D  L N ++E Y KC     A+ +F  + H ++Y           
Sbjct: 100 KTIQAHISHSKRFAGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVY----------- 148

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                               SW  L++A  +NG  +  L +  +M   G  P  +TLA+V
Sbjct: 149 --------------------SWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATV 188

Query: 127 FKASTALLDVEHGRRCHG-LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             A + L + +  R+ H        L  ++ +  AL+ +YAKCG   HA  VF++    +
Sbjct: 189 IGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKD 248

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
                AM+S   +    V+A+  F  +    +  + V+ + +   CA    GV SD    
Sbjct: 249 LACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATN--GVYSD---- 302

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                      +  H   I      D+ ++ +L+ MY++ G ++ A  +F  +P ++VV+
Sbjct: 303 ----------ARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVT 352

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
           WNVMIAGY Q+  + +A++L   M++ G EPDE+T +N+L +C  +  +  GR++     
Sbjct: 353 WNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVV 412

Query: 361 ---FDS-----------------------------MPSPSVSSWNAMLSSYSQSENHKEA 388
              +DS                                 SV SW AML++ +++   + A
Sbjct: 413 DAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSA 472

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
           + LFR+M   GV+ +  T    + +C+++G L  G  +    + T   ID  + + LI +
Sbjct: 473 LALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINL 532

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
           Y KC R + A  VFH +   +IV WN+++A  S N  +  +    ++M  +   P + + 
Sbjct: 533 YGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTL 592

Query: 509 ATVLSSCA 516
             +L  C+
Sbjct: 593 LNMLFGCS 600



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 192/366 (52%), Gaps = 12/366 (3%)

Query: 344 MLVACV-----RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           +L+ CV     + G +K  R +F S+  P+V SW  +L++Y+Q+ +HK  ++L R+M   
Sbjct: 117 LLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLL 176

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS-HIDNYVASGLIGIYSKCQRNEL 457
           GV P+  TLA ++ + + +G  +  +++HA +  T     D  + + LI +Y+KC     
Sbjct: 177 GVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFH 236

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           AE VF +    D+ C N+MI+        ++A   F +++ + + P Q ++A +  +CA 
Sbjct: 237 AEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACAT 296

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
                  R  H          D+ V +AL+ MY +CG +  AR+ FD M GKN VTWN M
Sbjct: 297 NGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVM 356

Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           I GYAQ GY DEA++LY  M A+GV+PD+ITFV +L +CS +  +  G +I   + +D G
Sbjct: 357 IAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHV-VDAG 415

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI-WEVLLSSCRLHANVRLAKRA 696
            +  L   + +I      G   +A  +  +       VI W  +L++   +       R+
Sbjct: 416 YDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGE----GRS 471

Query: 697 AEELFR 702
           A  LFR
Sbjct: 472 ALALFR 477



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 128/294 (43%), Gaps = 44/294 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +H H++  G      + + LI +YS C +   A  +F    HK + +         
Sbjct: 403 AGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVF----HKGVTT--------- 449

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                             +V+SW  +++AL RNG    AL+++ KM  EG     +T  S
Sbjct: 450 ----------------HSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVS 493

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A +++  +  G      VI  G   ++ +  +L++LY KCG   +A+ VF  +S  N
Sbjct: 494 TIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKN 553

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+  +++  ++      + E+ + M       + ++L ++L  C+  G      + A+
Sbjct: 554 IVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNG------LVAK 607

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
           + + F   V+G   HCL          H    L+D+  ++G ++  E   S+ P
Sbjct: 608 AVSYFRSMVYG---HCLV-----PTSEHY-GCLVDLLGRSGQLEEVEAFISSKP 652



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V G  +   ++  G   D  L   LI LY KC     A  +F  +  K+I +WN IL+
Sbjct: 503 ALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILA 562

Query: 63  AQCKSDDLEFAYKLFDEM----PERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFV 117
           A  ++ +   + +L  EM     + N ++  N++     NGL  KA+S +  M      V
Sbjct: 563 ASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLV 622

Query: 118 PT 119
           PT
Sbjct: 623 PT 624


>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
 gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 601

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 178/528 (33%), Positives = 278/528 (52%), Gaps = 37/528 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G  +H   I +GFE+D+ +  SL+DMY+K  ++ ++  +F     RSV+SWN MIA Y +
Sbjct: 72  GTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSR 131

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-----------------C---------- 348
            ++  +A++L + M   GFEP+  T +++L                   C          
Sbjct: 132 SFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDT 191

Query: 349 ----------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                     V  G I +   +F ++   +V SW  ML  Y ++    +  + F +M+  
Sbjct: 192 PVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQN 251

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
            V  D+     I+SSC  +G L  G  +H+  LKT    ++ +   LI +YSKC     A
Sbjct: 252 NVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSA 311

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
             VF  + E  I  W SMI+G +      EA   F    QN + P     AT +S+CA L
Sbjct: 312 RAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADL 371

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
            S    R++ A I++DG  +D  V ++LI +YCK G I  A + F+ M  ++   W+ M+
Sbjct: 372 GSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMM 431

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
           +GYA +G G++ + L+ +M  SG+KPD   + +IL ACSHSGLV+ G+E F +MQLD+G+
Sbjct: 432 NGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGI 491

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
            P + HYTC++D L RAGH   A   I EMP +     W   LS+CR + +V L + A  
Sbjct: 492 VPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANR 551

Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            L   +P+N   + L+AN+Y+S+G+W +   VR L+ +  +VK+P  S
Sbjct: 552 CLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCS 599



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 222/464 (47%), Gaps = 49/464 (10%)

Query: 88  WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
           WN  I + V  G   ++L  Y+ M + G    + T   + KA   L  +  G   H  +I
Sbjct: 21  WNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLI 80

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
            +G + +++V  +L+ +Y+K    + +  VF+E S  + +++ +M++  +++ RV EAL+
Sbjct: 81  HVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALK 140

Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
           +FR M+      +S +  S+L   A    G    +F        R +HG    CLT K  
Sbjct: 141 LFREMLGGGFEPNSSTFVSLLSGFADPTHG---SLFQ------GRLLHG----CLT-KFQ 186

Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
              D  + NSL+ MY   G +DSA  +F  + E++V+SW +M+ GY +     K  E   
Sbjct: 187 LHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFS 246

Query: 328 RMKSCGFEPDEVTSINMLVACV-----------------------------------RSG 352
           +M+      D+   ++++ +C+                                   + G
Sbjct: 247 QMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCG 306

Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
           D+ + R +FD +   S+ SW +M+S Y+ +   +EA+ LF       V+P+   LA  +S
Sbjct: 307 DLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAIS 366

Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
           +CA +G L   +++ A   +     D+ V++ LI +Y K    E AE+VF+ +   D+  
Sbjct: 367 ACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAA 426

Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
           W+SM+ G +++ +  +    F +M+++ + P    +A++L +C+
Sbjct: 427 WSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACS 470



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 213/502 (42%), Gaps = 93/502 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G +LHAH++  G   D F+   L+++YSK +N  +++ +FD+   + + SWN++++A  +
Sbjct: 72  GTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSR 131

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLAS 125
           S  +  A KLF EM               +  G E  + +  + +S  GF  PTH    S
Sbjct: 132 SFRVNEALKLFREM---------------LGGGFEPNSSTFVSLLS--GFADPTH---GS 171

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +F+          GR  HG + K  L  +  V N+L+ +Y   G    A  VF  +SE  
Sbjct: 172 LFQ----------GRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKT 221

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++T M+ G  K   V +  E F  M +  V +D      ++  C + G          
Sbjct: 222 VISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLG---------- 271

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G  +H L +K G + +  +   L+ MY+K GD+ SA  +F  L E+S+ S
Sbjct: 272 ------NLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYS 325

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
           W  MI+GY       +A+ L          P+       + AC   G +   RE+     
Sbjct: 326 WTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQ 385

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         F+SM    +++W++M++ Y+     ++ + 
Sbjct: 386 QDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMN 445

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESG------KQVHAASLKTASHIDNYVASG 444
           LF EMQ  G+KPD +  A IL +C+  G++E G       Q+    + T  H      + 
Sbjct: 446 LFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHY-----TC 500

Query: 445 LIGIYSKCQRNELAERVFHRIP 466
           L+ I S+    ELA      +P
Sbjct: 501 LVDILSRAGHLELALNTIQEMP 522



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 184/428 (42%), Gaps = 65/428 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+LLH  + +  L DDT + N L+++Y       SA                      C 
Sbjct: 175 GRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSA----------------------CS 212

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    +F  + E+ V+SW  ++   ++ G   K    +++M     V        +
Sbjct: 213 ---------VFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDI 263

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             +   L ++  G   H L++K GL     +   L+S+Y+KCG    A  VF+ +SE + 
Sbjct: 264 ISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSI 323

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC---GVESDVF 243
            ++T+M+SG A      EAL +F +  +  V  +   L++ +  CA  G      E + F
Sbjct: 324 YSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAF 383

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
            Q D                   G  +D  +S SL+ +Y K G ++ AE +F+++  R +
Sbjct: 384 IQQD-------------------GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDL 424

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
            +W+ M+ GY       K + L   M+  G +PD     ++L+AC  SG ++ G E F +
Sbjct: 425 AAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKN 484

Query: 364 MP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREM--QFRGVKPDRTTLAIILSSCAA 416
           M       P++  +  ++   S++ + + A+   +EM  QF+         A  LS+C  
Sbjct: 485 MQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQS-----QAWAPFLSACRT 539

Query: 417 MGILESGK 424
              +E G+
Sbjct: 540 YCDVELGE 547



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 2/251 (0%)

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           WN  + S        ++++ +  M+  G+  +  T  ++L +CA +  +  G  +HA  +
Sbjct: 21  WNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLI 80

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
                 D +V + L+ +YSK      + +VF       ++ WNSMIA  S +    EA  
Sbjct: 81  HVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALK 140

Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLS--SSFQGRQVHAQIEKDGYVNDIFVGSALIEM 549
            F++M      P   +F ++LS  A  +  S FQGR +H  + K    +D  V ++L++M
Sbjct: 141 LFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQM 200

Query: 550 YCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITF 609
           Y   G I  A   F  +  K  ++W  M+ GY + G   +    +  M  + V  D   F
Sbjct: 201 YVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVF 260

Query: 610 VAILTACSHSG 620
           V I+++C   G
Sbjct: 261 VDIISSCIQLG 271



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 143/316 (45%), Gaps = 46/316 (14%)

Query: 465 IPELDIVCWNSMI-----AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           I +  +  WN  I      G    SL+  +FM     R + ++   F+F  +L +CA L+
Sbjct: 13  ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFM-----RHSGIHGNNFTFPLLLKACANLA 67

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           S   G  +HA +   G+ +D+FV ++L++MY K  ++  +RQ FD    ++ ++WN MI 
Sbjct: 68  SIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIA 127

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC---SHSGLV-------------- 622
            Y+++   +EA++L+++M+  G +P+  TFV++L+     +H  L               
Sbjct: 128 AYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQL 187

Query: 623 --DVGVE------IFNSMQLDHGV-------EPILDHYTCMIDCLGRAGHFHEAEMLIDE 667
             D  VE        N  Q+D          E  +  +T M+    +AG   +      +
Sbjct: 188 HDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQ 247

Query: 668 MPCKD---DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYS-LLANIYSSLGR 723
           M   +   D  ++  ++SSC    N+ L       L +   K   P   LL ++YS  G 
Sbjct: 248 MRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGD 307

Query: 724 WDDLRAVRELMSENCI 739
               RAV +L+SE  I
Sbjct: 308 LLSARAVFDLLSEKSI 323


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 186/636 (29%), Positives = 310/636 (48%), Gaps = 59/636 (9%)

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
           ++++ N LL+ Y + G    A  + +EM   N V+F  ++   ++      +LE      
Sbjct: 42  SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARAR 101

Query: 214 RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
           R  V +D  S ++ L  C+R G                    G+ VH L I  G  + + 
Sbjct: 102 RAGVDVDRFSYAAALAACSRAG----------------HLRAGRAVHALAILDGLSSGVF 145

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY---GQKYQSTKAIELLQR-- 328
           +SNSL+ MY+K G+M  A  +F    ER  VSWN +++GY   G + +  +   +++R  
Sbjct: 146 VSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGG 205

Query: 329 -----------MKSCGFEPDEVTSINMLV-ACV--------------------RSGDIKT 356
                      +K C    D    I   V  CV                    + G +  
Sbjct: 206 MGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVE 265

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSEN------HKEAIKLFREMQFRGVKPDRTTLAII 410
              +F S+  P+V  +N M++ + ++E         EA+ L+ E+Q RG++P   T + +
Sbjct: 266 AAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSV 325

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           L +C   G LE GKQ+H   +K     D+++ S LI +Y      E   R F   P+ DI
Sbjct: 326 LRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDI 385

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           V W +M++G   N L  +A   F +     + P  F+ ++V+++CA L+ +  G Q+   
Sbjct: 386 VTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCF 445

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
             K G+     +G++ + MY + GD+  A + F  M   + V+W+ +I  +AQ+G   +A
Sbjct: 446 ATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDA 505

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           +  + +M+ + V P++ITF+ +LTACSH GLVD G+  + +M  D+G+ P + H TC++D
Sbjct: 506 LHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVD 565

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
            LGRAG   +AE  I       DPVIW  LL+SCR+H ++   +  A  +  L+P +SA 
Sbjct: 566 LLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSAS 625

Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           Y +L N+Y   G        R+LM +  + K+P  S
Sbjct: 626 YVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLS 661



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 151/575 (26%), Positives = 279/575 (48%), Gaps = 63/575 (10%)

Query: 50  PHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN 109
           P   ++  N +L+A C+      A +L DEMP RN VS+N LI A  R GL   +L    
Sbjct: 39  PAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLA 98

Query: 110 KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG 169
           +    G      + A+   A +    +  GR  H L I  GL   ++V+N+L+S+Y+KCG
Sbjct: 99  RARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCG 158

Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLG 229
               A  VF+   E ++V++ +++SG  +     E + +F +M R  + ++S +L SV+ 
Sbjct: 159 EMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK 218

Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
            C+  G G   D+              + VH   IK G ++D+ L ++++DMYAK G + 
Sbjct: 219 CCSGRGDGT-MDI-------------AEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALV 264

Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQ------KYQSTKAIELLQRMKSCGFEPDEVTSIN 343
            A  +F ++ E +VV +N MIAG+ +      K  +++A+ L   ++S G +P E T  +
Sbjct: 265 EAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSS 324

Query: 344 MLVACVRSGDIKTGREM-----------------------------------FDSMPSPS 368
           +L AC  +G ++ G+++                                   F S P   
Sbjct: 325 VLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHD 384

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
           + +W AM+S   Q+E H++A+ LF E    G+KPD  T++ ++++CA++ +  +G+Q+  
Sbjct: 385 IVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQC 444

Query: 429 ASLKTASHIDNYVASG--LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
               T S  D +   G   + +Y++    + A R F  +   D+V W+++I+  + +   
Sbjct: 445 --FATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCA 502

Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSA 545
            +A  FF +M   ++ P + +F  VL++C+      +G + +  + KD G    I   + 
Sbjct: 503 RDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTC 562

Query: 546 LIEMYCKCGDIYGARQFFD--MMHGKNTVTWNEMI 578
           ++++  + G +  A  F    + H  + V W  ++
Sbjct: 563 VVDLLGRAGRLADAEAFISNGIFHA-DPVIWRSLL 596



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 141/558 (25%), Positives = 234/558 (41%), Gaps = 106/558 (18%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG+ +HA  + +GL    F+ N L+ +YSKC     A+ +FD    +D  SW        
Sbjct: 127 AGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW-------- 178

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                  N+L+S  VR G  E+ + V+  M   G       L S
Sbjct: 179 -----------------------NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGS 215

Query: 126 VFKASTALLD--VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           V K  +   D  ++     HG VIK GLD ++++ +A++ +YAK G    A  +F  + E
Sbjct: 216 VIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQE 275

Query: 184 PNEVTFTAMMSGLAKTDRVV------EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           PN V F  M++G  +T+ V+      EAL ++  +  + +     + SSVL  C   G  
Sbjct: 276 PNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAG-- 333

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                      +F + +HGQ      IK  F+ D  + ++L+D+Y  +G M+     F +
Sbjct: 334 ---------YLEFGKQIHGQ-----VIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRS 379

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------- 348
            P+  +V+W  M++G  Q     KA+ L       G +PD  T  +++ AC         
Sbjct: 380 SPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAG 439

Query: 349 --------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                                      RSGD+      F  M S  V SW+A++S ++Q 
Sbjct: 440 EQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQH 499

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK------TASH 436
              ++A+  F EM    V P+  T   +L++C+  G+++ G + +    K      T  H
Sbjct: 500 GCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKH 559

Query: 437 IDNYVASGLIGIYSKCQRNE--LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
               V   L+G   +    E  ++  +FH  P    V W S++A   ++  D+E      
Sbjct: 560 CTCVV--DLLGRAGRLADAEAFISNGIFHADP----VIWRSLLASCRIHR-DLERGQLVA 612

Query: 495 QMRQNEMYPTQFSFATVL 512
             R  E+ PT  +   +L
Sbjct: 613 N-RIMELEPTSSASYVIL 629



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 203/435 (46%), Gaps = 39/435 (8%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRN----GLE--EKALS 106
           D++  +A++    K   L  A  LF  + E NVV +N +I+   R     G E   +AL+
Sbjct: 246 DVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALT 305

Query: 107 VYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYA 166
           +Y+++ + G  PT  T +SV +A      +E G++ HG VIK    ++ ++ +AL+ LY 
Sbjct: 306 LYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYF 365

Query: 167 KCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS 226
             G  +     F    + + VT+TAM+SG  + +   +AL +F   +   +  D  ++SS
Sbjct: 366 NSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISS 425

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           V+  CA       S   A++         G+Q+ C   K GF+    + NS + MYA++G
Sbjct: 426 VMNACA-------SLAVARA---------GEQIQCFATKSGFDRFTVMGNSCVHMYARSG 469

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
           D+D+A   F  +    VVSW+ +I+ + Q   +  A+     M      P+E+T + +L 
Sbjct: 470 DVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLT 529

Query: 347 ACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           AC   G +  G   +++M      SP++     ++    ++    +A        F    
Sbjct: 530 ACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHA-- 587

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLK-----TASHI---DNYVASGLIGIYSKCQ 453
            D      +L+SC     LE G+ V    ++     +AS++   + Y+ +G + + SK  
Sbjct: 588 -DPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASK-T 645

Query: 454 RNELAERVFHRIPEL 468
           R+ + +R   + P L
Sbjct: 646 RDLMKQRGVKKEPGL 660


>gi|413938252|gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]
          Length = 709

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 206/656 (31%), Positives = 335/656 (51%), Gaps = 38/656 (5%)

Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKN----IYVANALLSLYAKCGW 170
           G V T  +  ++ + +    D       H  ++K G  ++    +  AN+LL  Y +CG 
Sbjct: 18  GTVITPTSSVALLRGAAERRDTALTSALHAALLKSGALRSRQAPLAAANSLLHAYLQCGL 77

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI-----DSVSLS 225
              A+ + +EM   +  T+  ++S   +    ++AL  F  M+    S      D V  +
Sbjct: 78  LSRALRLLDEMPRRDAATYAPLISAHCRLGAPLDALRAFLDMLAWGCSDEEGVDDVVRPN 137

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
                   + CG+        D + +R VHG  V       GF  D  +  SL++MYAK 
Sbjct: 138 EFTAAAVVQACGL------ARDERLARMVHGYLV-----AGGFCDDPFVLGSLVNMYAKV 186

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
           GD+ SA  +   LP R VVSW  +++G        +A+ +   M   G  P+ VT ++++
Sbjct: 187 GDVASARRLLLGLPCRDVVSWTAIVSGCVLNAMLEEALGVFLMMLEDGVLPNNVTMLSVI 246

Query: 346 VACVRSGDIKTGREMFDSMPSPSV--------SSWNAMLSSYSQSENHKEAIKLFREMQF 397
            AC   G      E+F  + +  V        S  N+++  Y+++   +EAI+LF+    
Sbjct: 247 QACALMG----ASELFGPVHALVVLLELEHDASVVNSLIMMYAKNGFVEEAIRLFKGFYL 302

Query: 398 R--GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
           +   V  +   LA +L  C   G +++G+ +HA ++K  +     V + L+G+Y++ ++ 
Sbjct: 303 KTGSVCSNEDVLAAVLYGCTISGSVKNGEGLHAHTIKMGAFPSISVENSLMGMYARFEQI 362

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLS-- 513
           + A  VF  +   DIV WN++I+ L+      EA   F  +           F TVLS  
Sbjct: 363 DAALLVFEGMEVKDIVSWNTIISCLAKTDRVNEAMDIFSVLHAAAGGGLAPDFVTVLSML 422

Query: 514 -SCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
            +C+      QG+ +H  + K G+V D+ + +ALI MY K G I  A   F+ M  K+ V
Sbjct: 423 QACSNAGLLHQGQMLHGYVMKSGFVYDVSICNALISMYAKLGRIDFAEMIFERMDIKDLV 482

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVK-PDDITFVAILTACSHSGLVDVGVEIFNS 631
           +WN MI+ Y  +G G  A+R++  +  +G   P+ ITFV++++ACSHSGLV  G + F S
Sbjct: 483 SWNSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVSVISACSHSGLVSEGHKCFES 542

Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
           M  DHG+EP +DHY C++D LGR+G F EAE  I +MP + D  IW  LL++C+LH NV 
Sbjct: 543 MGRDHGIEPSMDHYACVVDLLGRSGRFAEAEQFIRDMPVRPDSTIWGPLLAACQLHGNVD 602

Query: 692 LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           LA++AA+EL  L+P++      L+N Y+S+GRW D   +R  M    + K+  +S 
Sbjct: 603 LAEKAAKELSALEPESDIWRVSLSNTYASVGRWRDAAKIRSEMRRVGLRKETGWSF 658



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 215/462 (46%), Gaps = 71/462 (15%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           +++H +++  G  DD F+   L+ +Y+K  +  SA+ L   +P +D+ SW AI+S    +
Sbjct: 158 RMVHGYLVAGGFCDDPFVLGSLVNMYAKVGDVASARRLLLGLPCRDVVSWTAIVSGCVLN 217

Query: 68  DDLEFAYKLFDEMPERNVVS---------------------------------------W 88
             LE A  +F  M E  V+                                         
Sbjct: 218 AMLEEALGVFLMMLEDGVLPNNVTMLSVIQACALMGASELFGPVHALVVLLELEHDASVV 277

Query: 89  NNLISALVRNGLEEKALSVYNK--MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
           N+LI    +NG  E+A+ ++    +           LA+V    T    V++G   H   
Sbjct: 278 NSLIMMYAKNGFVEEAIRLFKGFYLKTGSVCSNEDVLAAVLYGCTISGSVKNGEGLHAHT 337

Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
           IK+G   +I V N+L+ +YA+      A+ VFE M   + V++  ++S LAKTDRV EA+
Sbjct: 338 IKMGAFPSISVENSLMGMYARFEQIDAALLVFEGMEVKDIVSWNTIISCLAKTDRVNEAM 397

Query: 207 EMFRLMIRKA---VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCL 262
           ++F ++   A   ++ D V++ S+L  C+  G                  +H GQ +H  
Sbjct: 398 DIFSVLHAAAGGGLAPDFVTVLSMLQACSNAGL-----------------LHQGQMLHGY 440

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
            +K GF  D+ + N+L+ MYAK G +D AE+IF  +  + +VSWN MI  YG       A
Sbjct: 441 VMKSGFVYDVSICNALISMYAKLGRIDFAEMIFERMDIKDLVSWNSMINAYGMHGDGHSA 500

Query: 323 IELLQRMKSCGFE-PDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAML 376
           + +  ++K  G   P+ +T ++++ AC  SG +  G + F+SM       PS+  +  ++
Sbjct: 501 LRVFHQLKDAGTPAPNAITFVSVISACSHSGLVSEGHKCFESMGRDHGIEPSMDHYACVV 560

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
               +S    EA +  R+M    V+PD T    +L++C   G
Sbjct: 561 DLLGRSGRFAEAEQFIRDMP---VRPDSTIWGPLLAACQLHG 599



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 261/570 (45%), Gaps = 40/570 (7%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-----S 112
           N++L A  +   L  A +L DEMP R+  ++  LISA  R G    AL  +  M     S
Sbjct: 66  NSLLHAYLQCGLLSRALRLLDEMPRRDAATYAPLISAHCRLGAPLDALRAFLDMLAWGCS 125

Query: 113 NEGFV-----PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
           +E  V     P   T A+V +A     D    R  HG ++  G   + +V  +L+++YAK
Sbjct: 126 DEEGVDDVVRPNEFTAAAVVQACGLARDERLARMVHGYLVAGGFCDDPFVLGSLVNMYAK 185

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
            G    A  +   +   + V++TA++SG      + EAL +F +M+   V  ++V++ SV
Sbjct: 186 VGDVASARRLLLGLPCRDVVSWTAIVSGCVLNAMLEEALGVFLMMLEDGVLPNNVTMLSV 245

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           +  CA  G    S++F               VH L + L  E D  + NSL+ MYAKNG 
Sbjct: 246 IQACALMGA---SELFG-------------PVHALVVLLELEHDASVVNSLIMMYAKNGF 289

Query: 288 MDSAEVIFSN--LPERSVVSWNVMIAG--YGQKYQ-STKAIELLQ-RMKSCGFEPDEVTS 341
           ++ A  +F    L   SV S   ++A   YG     S K  E L       G  P     
Sbjct: 290 VEEAIRLFKGFYLKTGSVCSNEDVLAAVLYGCTISGSVKNGEGLHAHTIKMGAFPSISVE 349

Query: 342 INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR--- 398
            +++    R   I     +F+ M    + SWN ++S  ++++   EA+ +F  +      
Sbjct: 350 NSLMGMYARFEQIDAALLVFEGMEVKDIVSWNTIISCLAKTDRVNEAMDIFSVLHAAAGG 409

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G+ PD  T+  +L +C+  G+L  G+ +H   +K+    D  + + LI +Y+K  R + A
Sbjct: 410 GLAPDFVTVLSMLQACSNAGLLHQGQMLHGYVMKSGFVYDVSICNALISMYAKLGRIDFA 469

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQFSFATVLSSCAK 517
           E +F R+   D+V WNSMI    ++     A   F Q++      P   +F +V+S+C+ 
Sbjct: 470 EMIFERMDIKDLVSWNSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVSVISACSH 529

Query: 518 LSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWN 575
                +G +    + +D G    +   + ++++  + G    A QF  DM    ++  W 
Sbjct: 530 SGLVSEGHKCFESMGRDHGIEPSMDHYACVVDLLGRSGRFAEAEQFIRDMPVRPDSTIWG 589

Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
            ++     +G  D A +  K++  S ++P+
Sbjct: 590 PLLAACQLHGNVDLAEKAAKEL--SALEPE 617



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/403 (22%), Positives = 159/403 (39%), Gaps = 85/403 (21%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHAH ++ G F    + N L+ +Y++     +A  +F+ M  KDI SWN I+S   K
Sbjct: 330 GEGLHAHTIKMGAFPSISVENSLMGMYARFEQIDAALLVFEGMEVKDIVSWNTIISCLAK 389

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           +D +  A  +F                            SV +  +  G  P  +T+ S+
Sbjct: 390 TDRVNEAMDIF----------------------------SVLHAAAGGGLAPDFVTVLSM 421

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A +    +  G+  HG V+K G   ++ + NAL+S+YAK G    A  +FE M   + 
Sbjct: 422 LQACSNAGLLHQGQMLHGYVMKSGFVYDVSICNALISMYAKLGRIDFAEMIFERMDIKDL 481

Query: 187 VTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           V++ +M++          AL +F +L      + ++++  SV+  C+  G   E     +
Sbjct: 482 VSWNSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVSVISACSHSGLVSEGHKCFE 541

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S  +                 G E  +     ++D+  ++G    AE    ++P R    
Sbjct: 542 SMGR---------------DHGIEPSMDHYACVVDLLGRSGRFAEAEQFIRDMPVR---- 582

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI----KTGREMF 361
                                         PD      +L AC   G++    K  +E+ 
Sbjct: 583 ------------------------------PDSTIWGPLLAACQLHGNVDLAEKAAKEL- 611

Query: 362 DSMPSPSVSSWNAMLS-SYSQSENHKEAIKLFREMQFRGVKPD 403
            S   P    W   LS +Y+     ++A K+  EM+  G++ +
Sbjct: 612 -SALEPESDIWRVSLSNTYASVGRWRDAAKIRSEMRRVGLRKE 653


>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 650

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 185/568 (32%), Positives = 286/568 (50%), Gaps = 69/568 (12%)

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA-KNGDMDSAEVIFSNLPERSVV 304
           S N  S +   +++H   I+     D  L + ++  Y+  + ++  A ++F+ +   ++V
Sbjct: 24  SKNSISTDT-SKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLV 82

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----- 359
            WN MI G  Q     +AI +  RM   G   + +T I +  AC R  DI +GR+     
Sbjct: 83  VWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHA 142

Query: 360 ------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                         MFD M    + SWN ++  YSQ   +KE +
Sbjct: 143 LKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVL 202

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           +LF  M    +K D  T+  I+ +C+ +G  E    +     +    ID Y+ + LI +Y
Sbjct: 203 RLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMY 262

Query: 450 SKCQRNELAERVFHRI-------------------------------PELDIVCWNSMIA 478
            +    ELA+ VF R+                               P+ D++ W SMI 
Sbjct: 263 GRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMIT 322

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
           G S  S   +A   F++M   ++ P + + A+VLS+CA L     G  VH  I + G   
Sbjct: 323 GYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQA 382

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           DI+VG++LI+MYCKCG +  A + F  M  K++V+W  +I G A NG+ + A+ L+  M+
Sbjct: 383 DIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQML 442

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
             GV+P   TFV IL AC+H+GLV+ G+E F SM+  HG+ P + HY C++D L R+G+ 
Sbjct: 443 REGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNI 502

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
            +A   I +MP   D V+W +LLS+C+LH NV LA+ A + L  LDP +S  Y LL+N Y
Sbjct: 503 DKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTY 562

Query: 719 SSLGRWDDLRAVRELMSENCIVKDPAYS 746
           + + RWDD   +RELM E+  V+ P+ S
Sbjct: 563 AGVDRWDDAMKMRELM-EDSDVQKPSGS 589



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 210/482 (43%), Gaps = 112/482 (23%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K LHAH++R  L  D FL + +I  YS                                S
Sbjct: 34  KELHAHLIRTQLHTDPFLMSDVIRSYS------------------------------LSS 63

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            +L  A+ +F+++    +V WN++I  L ++    +A+ +Y +M ++G    ++TL  +F
Sbjct: 64  TNLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLF 123

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA   + D+  GR+ H   +K+G +  ++V+NAL+ +YA CG    A  +F+ M + + V
Sbjct: 124 KACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLV 183

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           ++  ++ G ++ ++  E L +F  M    +  D+V++  ++  C+  G       FA S 
Sbjct: 184 SWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLG----DWEFADSM 239

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMY------------------------- 282
            K+ +            +   E D++L N+L+DMY                         
Sbjct: 240 VKYIK------------ENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWN 287

Query: 283 ------AKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
                 AK G++ +A  +F N+P+R V+SW  MI GY Q  Q + A++L Q M +   +P
Sbjct: 288 ALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKP 347

Query: 337 DEVTSINMLVACVRSGDIKTG-----------------------------------REMF 361
           D+VT  ++L AC   G +  G                                    E+F
Sbjct: 348 DKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVF 407

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
             M      SW +++S  + +     A+ LF +M   GV+P   T   IL +CA  G++ 
Sbjct: 408 HRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVN 467

Query: 422 SG 423
            G
Sbjct: 468 KG 469



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 212/427 (49%), Gaps = 40/427 (9%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V+G+ +H H L+ G     F+ N LI +Y+ C     AQ +FD M  +D+ SWN ++   
Sbjct: 133 VSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGY 192

Query: 65  CKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
            + +  +   +LFD M   N+    V+   +I A    G  E A S+  K   E  +   
Sbjct: 193 SQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMV-KYIKENNLEID 251

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLD----KNIYVANALLSLYAKCGWTKHAVP 176
           + L +       L+D+ +GRR    + +   D    +NI   NAL+  +AK G    A  
Sbjct: 252 VYLGN------TLIDM-YGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARK 304

Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
           +F+ M + + +++T+M++G ++  +  +A+++F+ M+   V  D V+++SVL  CA  G 
Sbjct: 305 LFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLG- 363

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
             + DV             G  VH    + G +AD+++ NSL+DMY K G ++ A  +F 
Sbjct: 364 --KLDV-------------GWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFH 408

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
            + ++  VSW  +I+G      +  A++L  +M   G +P   T + +L+AC  +G +  
Sbjct: 409 RMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNK 468

Query: 357 GREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
           G E F+SM S     P++  +  ++   S+S N  +A +  ++M    + PD     I+L
Sbjct: 469 GLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMP---IVPDVVVWRILL 525

Query: 412 SSCAAMG 418
           S+C   G
Sbjct: 526 SACKLHG 532



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 184/378 (48%), Gaps = 25/378 (6%)

Query: 13  HILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEF 72
           +I  N L  D +L N LI++Y + +    AQ +FD+M  ++I SWNA++    K  +L  
Sbjct: 242 YIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTA 301

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA 132
           A KLFD MP+R+V+SW ++I+   +      A+ ++ +M      P  +T+ASV  A   
Sbjct: 302 ARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAH 361

Query: 133 LLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAM 192
           L  ++ G   H  + + G+  +IYV N+L+ +Y KCG  + A+ VF  M + + V++T++
Sbjct: 362 LGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSV 421

Query: 193 MSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSR 252
           +SGLA       AL++F  M+R+ V     +   +L  CA  G   +   + +S      
Sbjct: 422 ISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFES------ 475

Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVSWNVMIA 311
               + VH      G    +     ++D+ +++G++D A      +P    VV W ++++
Sbjct: 476 ---MESVH------GLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLS 526

Query: 312 G---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD--SMPS 366
               +G    +  A + L  +  C    + V   N      R  D    RE+ +   +  
Sbjct: 527 ACKLHGNVVLAEIATKRLLELDPCD-SGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQK 585

Query: 367 PSVSS---WNAMLSSYSQ 381
           PS SS    + M+S+YSQ
Sbjct: 586 PSGSSSIEVDGMVSNYSQ 603


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 176/528 (33%), Positives = 280/528 (53%), Gaps = 37/528 (7%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAK--NGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           QQVH   +K     D  ++ ++L+  A      +D A  IF+++ +    ++NVMI G  
Sbjct: 38  QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLA 97

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR------------------------ 350
            K     A+ L ++M     + D+ T  ++L AC R                        
Sbjct: 98  FKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEF 157

Query: 351 -----------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                       G I   R +FD MP  S+ +WN+MLS Y+++    E +KLFR++    
Sbjct: 158 VENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELR 217

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           ++ D  T+  +L +C  +  LE G+ +    +      +N + + LI +Y+KC + + A 
Sbjct: 218 IEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTAR 277

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           ++F  + + D+V W++MI+G +      EA   F +M++  +YP + +  +VL SCA L 
Sbjct: 278 KLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLG 337

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +   G+ VH  I+K      + +G+ LI+ Y KCG I  + + F  M  KN  TW  +I 
Sbjct: 338 AYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQ 397

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G A NG G  A+  +  M+ + VKP+D+TF+ +L+ACSH+ LVD G  +FNSM+ D  +E
Sbjct: 398 GLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIE 457

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P ++HY CM+D LGRAG   EA   ID MP   + V+W  LL+SCR H N+ +A+++ E 
Sbjct: 458 PRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEH 517

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           + RL+P +S  Y LL+N Y+ +GR +D   VR L+ E  I K P  SL
Sbjct: 518 ITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSL 565



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 229/501 (45%), Gaps = 64/501 (12%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           KA   G+ +HA IL++G   + F+ N LI++Y+ C     A+H+FD M            
Sbjct: 135 KALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGM------------ 182

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                              PER++V+WN+++S   +NGL ++ + ++ K+         +
Sbjct: 183 -------------------PERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDV 223

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T+ SV  A   L ++E G      ++  GL +N  +  +L+ +YAKCG    A  +F+EM
Sbjct: 224 TMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEM 283

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            + + V ++AM+SG A+ DR  EAL +F  M +  V  + V++ SVL  CA  G   E+ 
Sbjct: 284 DKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLG-AYET- 341

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                         G+ VH    K   +  + L   L+D YAK G +D +  +F  +  +
Sbjct: 342 --------------GKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK 387

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
           +V +W  +I G     +   A+E    M     +P++VT I +L AC  +  +  GR +F
Sbjct: 388 NVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLF 447

Query: 362 DSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
           +SM       P +  +  M+    ++   +EA +    M F    P+      +L+SC A
Sbjct: 448 NSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPF---PPNAVVWRTLLASCRA 504

Query: 417 MGILESGKQV--HAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
              +E  ++   H   L+ A H  +Y+   L   Y+   R E A RV   I E +I    
Sbjct: 505 HKNIEMAEKSLEHITRLEPA-HSGDYIL--LSNTYALVGRVEDAIRVRSLIKEKEI---- 557

Query: 475 SMIAGLSLNSLDIEAFMFFKQ 495
             I G SL  LD     FF +
Sbjct: 558 KKIPGCSLIELDGVVHEFFSE 578



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 182/394 (46%), Gaps = 51/394 (12%)

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D +++A  +F+ + +    ++N +I  L      + AL ++ KM  +       T +SV 
Sbjct: 69  DTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVL 128

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           KA + +  +  G + H L++K G   N +V N L+ +YA CG    A  VF+ M E + V
Sbjct: 129 KACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIV 188

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            + +M+SG  K     E +++FR ++   +  D V++ SVL  C R              
Sbjct: 189 AWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGR-------------- 234

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
              +    G+ +    +  G   +  L+ SL+DMYAK G +D+A  +F  + +R VV+W+
Sbjct: 235 --LANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWS 292

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--------- 358
            MI+GY Q  +  +A+ L   M+     P+EVT +++L +C   G  +TG+         
Sbjct: 293 AMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKK 352

Query: 359 --------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                                     E+F  M   +V +W A++   + +   K A++ F
Sbjct: 353 KMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFF 412

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
             M    VKP+  T   +LS+C+   +++ G+ +
Sbjct: 413 SSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL 446


>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g52850, chloroplastic; Flags: Precursor
 gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 893

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 210/778 (26%), Positives = 369/778 (47%), Gaps = 98/778 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +++ GL ++  LCN L+ LY K +                   WNA       
Sbjct: 42  GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGI-----------------WNA------- 77

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   KLFDEM  R V +W  +ISA  ++     ALS++ +M   G  P   T +SV
Sbjct: 78  -------RKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSV 130

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            ++   L D+ +G R HG VIK G + N  V ++L  LY+KCG  K A  +F  +   + 
Sbjct: 131 VRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADT 190

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++T M+S L    +  EAL+ +  M++  V  +  +   +LG  A    G+E       
Sbjct: 191 ISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLG--ASSFLGLE------- 241

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ +H   I  G   ++ L  SL+D Y++   M+ A  + ++  E+ V  W
Sbjct: 242 --------FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLW 293

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--VRSGD---------IK 355
             +++G+ +  ++ +A+     M+S G +P+  T   +L  C  VRS D         IK
Sbjct: 294 TSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK 353

Query: 356 TGRE-------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
            G E                         +F +M SP+V SW  ++         ++   
Sbjct: 354 VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFG 413

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN--YVASGLIGI 448
           L  EM  R V+P+  TL+ +L +C+ +  +    ++HA  L+   H+D    V + L+  
Sbjct: 414 LLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR--RHVDGEMVVGNSLVDA 471

Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIA-----GLSLNSLDIEAFMFFKQMRQNEMYP 503
           Y+  ++ + A  V   +   D + + S++      G    +L +  +M+   +R +    
Sbjct: 472 YASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMD---- 527

Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
            Q S    +S+ A L +   G+ +H    K G+     V ++L++MY KCG +  A++ F
Sbjct: 528 -QLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVF 586

Query: 564 DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           + +   + V+WN ++ G A NG+   A+  +++M     +PD +TF+ +L+ACS+  L D
Sbjct: 587 EEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTD 646

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           +G+E F  M+  + +EP ++HY  ++  LGRAG   EA  +++ M  K + +I++ LL +
Sbjct: 647 LGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRA 706

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           CR   N+ L +  A +   L P + A Y LLA++Y   G+ +  +  R LM+E  + K
Sbjct: 707 CRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSK 764


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 172/542 (31%), Positives = 283/542 (52%), Gaps = 60/542 (11%)

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           AL  +  M +  + +DS  + SVL  C+                + S    G+++H  ++
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACS----------------QISVARMGKEIHGFSV 136

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           K G  +D+ + N+L+ MY++ G + SA ++F  + ER VVSW+ MI  Y           
Sbjct: 137 KNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAY----------- 185

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                         +T                   +F      S+ SW AM++ Y +  +
Sbjct: 186 --------------IT-------------------LFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            +E  +LF  M    V P+  T+  ++ SC  +G ++ GK++HA  L+    +   +A+ 
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           L+ +Y KC     A  +F  +   D++ W +MI+  +  +    AF  F QMR N + P 
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           + +  ++LS CA   +   G+  HA I+K G   D+ + +ALI+MY KCGDI GA++ F 
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFS 392

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
               ++  TWN M+ GY  +GYG++A++L+ +M   GVKP+DITF+  L ACSH+GLV  
Sbjct: 393 EAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVE 452

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
           G  +F  M  D G+ P ++HY CM+D LGRAG   EA  +I+ MP   +  IW  +L++C
Sbjct: 453 GKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAAC 512

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           ++H N  + + AA EL  L+P+N     L++NIY++  RW+D+  +R+ + +  I K+P 
Sbjct: 513 KIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPG 572

Query: 745 YS 746
            S
Sbjct: 573 MS 574



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 214/413 (51%), Gaps = 33/413 (7%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H   ++NGL  D F+ N L+++YS+C +  SA+ LFDKM  +D+ SW+ ++ A   
Sbjct: 128 GKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYIT 187

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                    LF    +R++VSW  +I+  +R    E+   ++ +M  E   P  IT+ S+
Sbjct: 188 ---------LFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSL 238

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             +   +  V+ G+R H  +++ G   ++ +A AL+ +Y KCG  + A  +F+ M   + 
Sbjct: 239 IISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDV 298

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +T+TAM+S  A+ + +  A ++F  M    V  + +++ S+L +CA  G     D+    
Sbjct: 299 MTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGA---LDM---- 351

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+  H    K G E D+ L  +L+DMYAK GD+  A+ +FS   +R + +W
Sbjct: 352 ---------GKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTW 402

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
           NVM+AGYG      KA++L   M++ G +P+++T I  L AC  +G +  G+ +F+ M  
Sbjct: 403 NVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIH 462

Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                P V  +  M+    ++    EA K+   M    V P+      +L++C
Sbjct: 463 DFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMP---VTPNIAIWGAMLAAC 512



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 172/334 (51%), Gaps = 25/334 (7%)

Query: 378 SYSQSENH-KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           S+S  E+H + A+  +  M+   ++ D   +  +L +C+ + +   GK++H  S+K    
Sbjct: 82  SFSPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLV 141

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA-------GLSLNSL---- 485
            D +V + L+ +YS+C     A  +F ++ E D+V W++MI        G S  S+    
Sbjct: 142 SDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWT 201

Query: 486 ----------DI-EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
                     D+ E    F +M +  ++P   +  +++ SC  + +   G+++HA I ++
Sbjct: 202 AMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRN 261

Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
           G+   + + +AL++MY KCG+I  AR  FD M  K+ +TW  MI  YAQ    D A +L+
Sbjct: 262 GFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLF 321

Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
             M  +GV+P+++T V++L+ C+ +G +D+G + F++     GVE  +   T +ID   +
Sbjct: 322 VQMRDNGVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAK 380

Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
            G    A+ L  E     D   W V+++   +H 
Sbjct: 381 CGDISGAQRLFSE-AIDRDICTWNVMMAGYGMHG 413



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 191/439 (43%), Gaps = 75/439 (17%)

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           AL+ Y  M           + SV KA + +     G+  HG  +K GL  +++V NAL+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 164 LYAKCGWTKHAVPVFEEMSEPNE----------------------VTFTAMMSGLAKTDR 201
           +Y++CG    A  +F++MSE +                       V++TAM++G  + + 
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
           + E   +F  MI + V  + +++ S++  C   G  V+                G+++H 
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVG-AVQL---------------GKRLHA 256

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
             ++ GF   L L+ +L+DMY K G++ SA  IF ++  + V++W  MI+ Y Q      
Sbjct: 257 YILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDY 316

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVAC--------------------------------- 348
           A +L  +M+  G  P+E+T +++L  C                                 
Sbjct: 317 AFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALID 376

Query: 349 --VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
              + GDI   + +F       + +WN M++ Y      ++A+KLF EM+  GVKP+  T
Sbjct: 377 MYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDIT 436

Query: 407 LAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG-LIGIYSKCQRNELAERVFHRI 465
               L +C+  G++  GK +    +     +      G ++ +  +    + A ++   +
Sbjct: 437 FIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESM 496

Query: 466 P-ELDIVCWNSMIAGLSLN 483
           P   +I  W +M+A   ++
Sbjct: 497 PVTPNIAIWGAMLAACKIH 515


>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 174/532 (32%), Positives = 277/532 (52%), Gaps = 46/532 (8%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
            Q +H   IK G   DL +  SL+++YAK G M +A  IF +L  R+VV+W  ++ GY Q
Sbjct: 93  AQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGYVQ 152

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--------------- 360
             Q   AI++ Q M   G  P   T    L AC     IK G+++               
Sbjct: 153 NSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIKYKLDYDPSI 212

Query: 361 --------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
                               F S+   +V SW A++S+  ++      ++ F EM    +
Sbjct: 213 GNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDI 272

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
           KP+  TL  +LS C     L  G+ VH+ S+K     +  + + ++ +Y KC   + A+ 
Sbjct: 273 KPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQI 332

Query: 461 VFHRIPELDIVCWNSMIAG-----------LSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +FH++   ++V WN+MI+G            S     IEA   F ++ +    P  F+ +
Sbjct: 333 LFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLS 392

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           +VL+ C++LS+  QG Q+HAQ  K GY++D+ VG+AL+ MY KCG I  A + F  M  +
Sbjct: 393 SVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMSTR 452

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
             ++W  MI G AQ+G+ ++A++L++DM  +GV+P+ ITFV +L AC HSG+VD  +  F
Sbjct: 453 TLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEALGYF 512

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
             MQ ++ ++P++DHY C+I    +     EA  +I++M  +    IW +L++ CR    
Sbjct: 513 EMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAGCRNLGK 572

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
             L   AAE+L +L  K++  Y  L N+Y S  RW D+  VR+LM E  + K
Sbjct: 573 QELGFYAAEQLLKLKLKDTETYVTLLNMYISAKRWQDVSRVRKLMKEEKLGK 624



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 241/505 (47%), Gaps = 72/505 (14%)

Query: 29  LIELYSKCNNTHSAQ----HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERN 84
           L++  +K N+   AQ    H+     HKD+    ++++   K   +  A K+FD +  RN
Sbjct: 80  LLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRN 139

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
           VV+W  L++  V+N     A+ V+  M   G +P++ TL     A +A+  ++ G++ H 
Sbjct: 140 VVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHA 199

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
            VIK  LD +  + NAL SLY+K G    ++ VF+ + E N +++TA++S   +  +   
Sbjct: 200 FVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAM 259

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
            L  F  M+ + +  +  +L++VL +C    C   + V             G+ VH L+I
Sbjct: 260 GLRFFNEMLLEDIKPNEFTLTTVLSLC----CVTLALVL------------GRLVHSLSI 303

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK--- 321
           KLG++ +L ++NS++ +Y K G MD A+++F  +   ++V+WN MI+G+ Q     K   
Sbjct: 304 KLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDF 363

Query: 322 --------AIELLQRMKSCGFEPDEVTSINMLVACVR----------------------- 350
                   A+ +   +   G +PD  T  ++L  C R                       
Sbjct: 364 SAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDV 423

Query: 351 ------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                        G I    + F  M + ++ SW  M++  +Q  + ++A++LF +M+  
Sbjct: 424 VVGTALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLA 483

Query: 399 GVKPDRTTLAIILSSCAAMGILESGK---QVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
           GV+P++ T   +L++C   G+++      ++     +    +D+Y    LI ++ K +R 
Sbjct: 484 GVRPNQITFVGVLAACCHSGMVDEALGYFEMMQKEYRIKPVMDHY--GCLIAMFVKLRRL 541

Query: 456 ELAERVFHRIP-ELDIVCWNSMIAG 479
           + A  + +++  E     W+ +IAG
Sbjct: 542 DEAFDIINKMDFEPSEFIWSILIAG 566



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 210/472 (44%), Gaps = 69/472 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LHA +++  L  D  + N L  LYSK  +  S+ ++F  +  K++ SW A+      
Sbjct: 194 GKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAV------ 247

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    ISA   NG     L  +N+M  E   P   TL +V
Sbjct: 248 -------------------------ISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTV 282

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                  L +  GR  H L IK+G   N+ + N+++ LY KCG    A  +F +M   N 
Sbjct: 283 LSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNL 342

Query: 187 VTFTAMMSG------LAKTD-----RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
           VT+ AM+SG      LAK D       +EAL +F  + R     D  +LSSVL VC+R  
Sbjct: 343 VTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSR-- 400

Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
                          S    G+Q+H  TIK G+ +D+ +  +L++MY+K G +  A   F
Sbjct: 401 --------------LSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAF 446

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
             +  R+++SW  MI G  Q   S +A++L + M+  G  P+++T + +L AC  SG + 
Sbjct: 447 VEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVD 506

Query: 356 TGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAII 410
                F+ M       P +  +  +++ + +     EA  +  +M F   +P     +I+
Sbjct: 507 EALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDF---EPSEFIWSIL 563

Query: 411 LSSCAAMGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAERV 461
           ++ C  +G  E G       LK      + YV   L+ +Y   +R +   RV
Sbjct: 564 IAGCRNLGKQELGFYAAEQLLKLKLKDTETYVT--LLNMYISAKRWQDVSRV 613



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 170/375 (45%), Gaps = 40/375 (10%)

Query: 3   AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
           A V G+L+H+  ++ G   +  + N ++ LY KC +   AQ LF KM   ++ +WNA++S
Sbjct: 291 ALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMIS 350

Query: 63  AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
              ++ DL       D+   +             R+G+E  ALS++ +++  G  P   T
Sbjct: 351 GHAQAMDLA-----KDDFSAQ-------------RSGIE--ALSIFLELNRTGKKPDLFT 390

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L+SV    + L  +  G + H   IK G   ++ V  AL+++Y+KCG    A   F EMS
Sbjct: 391 LSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMS 450

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
               +++T M++GLA+     +AL++F  M    V  + ++   VL  C   G   E+  
Sbjct: 451 TRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEALG 510

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
           + +   K  R                +  +     L+ M+ K   +D A  I + +  E 
Sbjct: 511 YFEMMQKEYR---------------IKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEP 555

Query: 302 SVVSWNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
           S   W+++IAG    G++     A E L ++K    E   VT +NM ++  R  D+   R
Sbjct: 556 SEFIWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTE-TYVTLLNMYISAKRWQDVSRVR 614

Query: 359 EMFDSMPSPSVSSWN 373
           ++         + W+
Sbjct: 615 KLMKEEKLGKFNDWS 629


>gi|218193985|gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
          Length = 628

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 165/490 (33%), Positives = 266/490 (54%), Gaps = 35/490 (7%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +Q+H      G   D   +N L+  YA  GD+ +A  +F  +P R+V+SWN++  GY   
Sbjct: 61  RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGY--- 117

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                           +++GD+   R++FD MP  +V++WNAM+
Sbjct: 118 --------------------------------IKNGDLGGARKLFDEMPERNVATWNAMV 145

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           +  +     +E++ LF +M+  G+ PD   L  +   CA +  + +G+QVHA  +++   
Sbjct: 146 AGLTNLGFDEESLGLFLDMRREGMHPDEFGLGSVSRCCAGLRDVVTGRQVHAYVVRSGLD 205

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D  V S L  +Y +C   +  E V   +P L IV  N++IAG + N     A  +F  M
Sbjct: 206 RDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMM 265

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R   +     +F + +SSC+ L++  QG+Q+H Q+ K G    + V + L+ MY +CG +
Sbjct: 266 RSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCL 325

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             + + F    G +T   + MI  Y  +G+G +A+ L+K M+  G +P D+TF+A+L AC
Sbjct: 326 GDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYAC 385

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SHSGL + G++ F  M   +G++P + HYTC++D LGR+G   EAE LI  MP   D VI
Sbjct: 386 SHSGLKEEGMDCFELMTKTYGIQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVI 445

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W+ LLS+C+   N  +A+R A+ +  LDP +SA Y LL+NI ++  RW D+  VR+ M +
Sbjct: 446 WKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRD 505

Query: 737 NCIVKDPAYS 746
           N + K+P  S
Sbjct: 506 NNVRKEPGVS 515



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 201/412 (48%), Gaps = 24/412 (5%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + LHA    +G   D F  N L+  Y+   +  +A+ LF+++P +++ SWN +     K+
Sbjct: 61  RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 120

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            DL  A KLFDEMPERNV +WN +++ L   G +E++L ++  M  EG  P    L SV 
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLDMRREGMHPDEFGLGSVS 180

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           +    L DV  GR+ H  V++ GLD+++ V ++L  +Y +CG  +    V   +   + V
Sbjct: 181 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 240

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           +   +++G  +      ALE F +M    V+ D V+  S +  C        SD+ A + 
Sbjct: 241 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSC--------SDLAALA- 291

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   GQQ+H   +K G +  + +   L+ MY++ G +  +E +F           +
Sbjct: 292 -------QGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 344

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
            MI+ YG      KAIEL ++M + G EP +VT + +L AC  SG  + G + F+ M   
Sbjct: 345 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 404

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               PSV  +  ++    +S    EA  L   M    + PD      +LS+C
Sbjct: 405 YGIQPSVKHYTCVVDLLGRSGCLDEAEALILSMP---LTPDGVIWKTLLSAC 453



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/309 (21%), Positives = 125/309 (40%), Gaps = 49/309 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +HA+++R+GL  D  + + L  +Y +C      + +   +P   I S N I++ +
Sbjct: 190 VTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGR 249

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                           +NG  E AL  +  M + G     +T  
Sbjct: 250 -------------------------------TQNGDSEGALEYFCMMRSVGVAADVVTFV 278

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S   + + L  +  G++ HG V+K G+DK + V   L+ +Y++CG    +  VF      
Sbjct: 279 SAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGS 338

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVF 243
           +    +AM+S         +A+E+F+ M+        V+  ++L  C+  G   E  D F
Sbjct: 339 DTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCF 398

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERS 302
                             +T   G +  +     ++D+  ++G +D AE +  ++P    
Sbjct: 399 ----------------ELMTKTYGIQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPD 442

Query: 303 VVSWNVMIA 311
            V W  +++
Sbjct: 443 GVIWKTLLS 451


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 158/419 (37%), Positives = 248/419 (59%), Gaps = 1/419 (0%)

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
           RM +  + P       ++   VR G +   R + D MP  SV SW  M+S YSQ+E H E
Sbjct: 67  RMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVE 126

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+ LF +M   G  P+  TLA +L+SC+    +  GKQVH+  +KT      +V S L+ 
Sbjct: 127 ALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLD 186

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+K +  + A RVF  +PE D+V   ++I+G +   LD EA   F+Q+    M     +
Sbjct: 187 MYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVT 246

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           F T++++ + L+S   G+QVHA I +      + + ++LI+MY KCG +  +R+ FD M 
Sbjct: 247 FTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNML 306

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ V+WN M+ GY ++G G E + L+KD+    VKPD +T +A+L+ CSH GLVD G++
Sbjct: 307 ERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLSGCSHGGLVDEGLD 365

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           IF+++  +        HY C+ID LGR+G   +A  LI+ MP +  P IW  LL +CR+H
Sbjct: 366 IFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVH 425

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ANV + +  A++L  ++P+N+  Y +L+NIY++ G W D+  VR+LM E  + K+P  S
Sbjct: 426 ANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQS 484



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 192/402 (47%), Gaps = 53/402 (13%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++A   G+ +HA ++        FL  RL+ +Y +C     A+++ D+M           
Sbjct: 55  RRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRM----------- 103

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
                               PER+VVSW  +IS   +     +AL ++ KM   G +P  
Sbjct: 104 --------------------PERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 143

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            TLA+V  + +    +  G++ H L++K   + +++V ++LL +YAK    + A  VF+ 
Sbjct: 144 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 203

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           + E + V+ TA++SG A+     EAL++FR +  + +  + V+ +++  V A  G     
Sbjct: 204 LPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTL--VTALSG----- 256

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
              A  D       +G+QVH L ++      + L NSL+DMY+K G +  +  +F N+ E
Sbjct: 257 --LASLD-------YGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLE 307

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           RSVVSWN M+ GYG+     + I L + +     +PD VT + +L  C   G +  G ++
Sbjct: 308 RSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDI 366

Query: 361 FDSMPSPS-----VSSWNAMLSSYSQSENHKEAIKLFREMQF 397
           FD++            +  ++    +S   ++A+ L   M F
Sbjct: 367 FDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPF 408



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 185/385 (48%), Gaps = 58/385 (15%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           GR+ H  +I       +++   L+++Y +CG    A  V + M E + V++T M+SG ++
Sbjct: 61  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 120

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
           T+R VEAL++F  M+R     +  +L++VL  C+    G +S               G+Q
Sbjct: 121 TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCS----GPQSI------------YQGKQ 164

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           VH L +K  FE+ + + +SLLDMYAK+ ++  A  +F  LPER VVS   +I+GY QK  
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 224

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVAC------------------------------ 348
             +A++L +++ S G + + VT   ++ A                               
Sbjct: 225 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 284

Query: 349 -----VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                 + G +   R +FD+M   SV SWNAML  Y +     E I LF+++  + VKPD
Sbjct: 285 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPD 343

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTAS---HIDNYVASGLIGIYSKCQRNELAER 460
             TL  +LS C+  G+++ G  +    +K  S   H  +Y    +I +  +  R E A  
Sbjct: 344 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY--GCIIDLLGRSGRLEKALN 401

Query: 461 VFHRIP-ELDIVCWNSMIAGLSLNS 484
           +   +P E     W S++    +++
Sbjct: 402 LIENMPFESTPSIWGSLLGACRVHA 426



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 146/271 (53%), Gaps = 2/271 (0%)

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           +++C     L  G+QVHA  +        ++ + L+ +Y +C   + A  V  R+PE  +
Sbjct: 49  ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSV 108

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           V W +MI+G S     +EA   F +M +    P +++ ATVL+SC+   S +QG+QVH+ 
Sbjct: 109 VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 168

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + K  + + +FVGS+L++MY K  +I  AR+ FD +  ++ V+   +I GYAQ G  +EA
Sbjct: 169 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 228

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           + L++ + + G++ + +TF  ++TA S    +D G ++ +++ L   +   +     +ID
Sbjct: 229 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQV-HALILRKELPFFVALQNSLID 287

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
              + G    +  + D M  +   V W  +L
Sbjct: 288 MYSKCGKLLYSRRVFDNM-LERSVVSWNAML 317



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 138/261 (52%), Gaps = 19/261 (7%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           ++  +++L    KS++++ A ++FD +PER+VVS   +IS   + GL+E+AL ++ ++ +
Sbjct: 178 MFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYS 237

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
           EG    H+T  ++  A + L  +++G++ H L+++  L   + + N+L+ +Y+KCG   +
Sbjct: 238 EGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLY 297

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           +  VF+ M E + V++ AM+ G  +     E + +F+  + K V  DSV+L +VL  C+ 
Sbjct: 298 SRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFK-DLHKEVKPDSVTLLAVLSGCSH 356

Query: 234 EGCGVES-DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
            G   E  D+F     + S  +H     C                ++D+  ++G ++ A 
Sbjct: 357 GGLVDEGLDIFDTVVKEQSALLHTGHYGC----------------IIDLLGRSGRLEKAL 400

Query: 293 VIFSNLPERSVVS-WNVMIAG 312
            +  N+P  S  S W  ++  
Sbjct: 401 NLIENMPFESTPSIWGSLLGA 421



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 90/165 (54%), Gaps = 1/165 (0%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +   +++C +  + ++GRQVHA++    Y   +F+G+ L+ MY +CG +  AR   D M 
Sbjct: 45  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ V+W  MI GY+Q     EA+ L+  M+ +G  P++ T   +LT+CS    +  G +
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           + +S+ +    E  +   + ++D   ++ +  EA  + D +P +D
Sbjct: 165 V-HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERD 208


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 173/562 (30%), Positives = 283/562 (50%), Gaps = 74/562 (13%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKN--GDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           QQVHC  IK G  A+  L N ++     +  GD   A  +F  +PE ++  WN MI GY 
Sbjct: 35  QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYS 94

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTS--------------------------------- 341
           +       + L   M   G +PD  T                                  
Sbjct: 95  RLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVF 154

Query: 342 -----INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                + M + C   G + T R +FD  P   V +WN ++S+Y++    +E+ +LF  M+
Sbjct: 155 VHTALVQMYLLC---GQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVME 211

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC---- 452
            + V P   TL ++LS+C+ +  L +GK+VH+         +  + + +I +Y+ C    
Sbjct: 212 DKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMD 271

Query: 453 ----------QRN-----------------ELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
                      R+                 ++A   F ++PE D V W +MI G   ++ 
Sbjct: 272 SALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNR 331

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             EA   F+ M+   + P +F+  +VL++CA L +   G  +   I+++   ND+FV +A
Sbjct: 332 FKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNA 391

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           LI+MY KCGD+  A   F  M  ++  TW  MI G A NG+G++A+ ++ +M+ + + PD
Sbjct: 392 LIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPD 451

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
           +IT++ +L+AC+H+GLVD G + F  M   HG+EP + HY C++D L RAG   EA  +I
Sbjct: 452 EITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVI 511

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
           + MP K + ++W  LL+ CR++    +A+   +++  L+P N A Y LL NIY++  RW+
Sbjct: 512 ENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWN 571

Query: 726 DLRAVRELMSENCIVKDPAYSL 747
           DLR +R++M +  I K P  SL
Sbjct: 572 DLRELRQMMMDKGIKKTPGCSL 593



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 134/547 (24%), Positives = 239/547 (43%), Gaps = 92/547 (16%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYS----WNAILSAQCKSD--DLEFAYKLFDEMPE 82
           LI L   C +    Q +  +   K + +     N +++  C  +  D ++A +LFDE+PE
Sbjct: 21  LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 80

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
            N+  WN +I    R    +  +S+Y +M   G  P   T   +FK  T  + +E+GR+ 
Sbjct: 81  PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 140

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           HG V+K GL  N++V  AL+ +Y  CG    A  VF+   + + +T+  ++S   K  + 
Sbjct: 141 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKF 200

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            E+  +F +M  K V   +V+L  VL  C+                K      G++VH  
Sbjct: 201 EESRRLFLVMEDKQVLPTTVTLVLVLSACS----------------KLKDLRTGKKVHSY 244

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN------------------------- 297
                 E++L L N+++DMYA  G+MDSA  IF +                         
Sbjct: 245 VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVA 304

Query: 298 ------LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-- 349
                 +PE+  VSW  MI GY +  +  +A+EL + M++   +PDE T +++L AC   
Sbjct: 305 RNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHL 364

Query: 350 ---------------------------------RSGDIKTGREMFDSMPSPSVSSWNAML 376
                                            + GD+     +F  M      +W AM+
Sbjct: 365 GALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMI 424

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
              + + + ++A+ +F  M    + PD  T   +LS+C   G+++ G++ +   + +   
Sbjct: 425 VGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK-YFLRMTSQHG 483

Query: 437 IDNYVA--SGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFF 493
           I+  +A    L+ + ++  R + A  V   +P + + + W +++AG  +      A M  
Sbjct: 484 IEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVV 543

Query: 494 KQMRQNE 500
           KQ+ + E
Sbjct: 544 KQILELE 550



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 216/490 (44%), Gaps = 88/490 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH H+L++GL  + F+   L+++Y  C    +A+ +FD  P  D+ +WN I+SA  K
Sbjct: 137 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 196

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               E + +LF  M ++ V                               +PT +TL  V
Sbjct: 197 VGKFEESRRLFLVMEDKQV-------------------------------LPTTVTLVLV 225

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG----------------- 169
             A + L D+  G++ H  V    ++ N+ + NA++ +YA CG                 
Sbjct: 226 LSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDI 285

Query: 170 --WTK------------HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
             WT              A   F++M E + V++TAM+ G  +++R  EALE+FR M   
Sbjct: 286 ISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQAT 345

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            V  D  ++ SVL  CA  G  +E                G+ +     +   + DL + 
Sbjct: 346 NVKPDEFTMVSVLTACAHLG-ALEL---------------GEWIRTYIDRNKIKNDLFVR 389

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+L+DMY K GD+D AE IF  + +R   +W  MI G        KA+++   M      
Sbjct: 390 NALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASIL 449

Query: 336 PDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIK 390
           PDE+T I +L AC  +G +  GR+ F  M S     P+++ +  ++   +++   KEA +
Sbjct: 450 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 509

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +   M    +K +      +L+ C      +  + V    L+     +  V   L  IY+
Sbjct: 510 VIENMP---IKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD-NGAVYVLLCNIYA 565

Query: 451 KCQR-NELAE 459
            C+R N+L E
Sbjct: 566 ACKRWNDLRE 575



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 198/416 (47%), Gaps = 35/416 (8%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +H+++    +  +  L N +I++Y+ C    SA  +F  M ++DI SW  I+S   
Sbjct: 237 TGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT 296

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
              +++ A   FD+MPE++ VSW  +I   +R+   ++AL ++  M      P   T+ S
Sbjct: 297 NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVS 356

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   L  +E G      + +  +  +++V NAL+ +Y KCG    A  +F EMS+ +
Sbjct: 357 VLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRD 416

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           + T+TAM+ GLA      +AL+MF  M++ ++  D ++   VL  C   G      +  +
Sbjct: 417 KFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG------LVDK 470

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VV 304
               F R         +T + G E ++     L+D+ A+ G +  A  +  N+P ++  +
Sbjct: 471 GRKYFLR---------MTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSI 521

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE----VTSINMLVACVRSGDIKTGREM 360
            W  ++AG  + Y+ +   E++ + +    EPD     V   N+  AC R  D++  R+M
Sbjct: 522 VWGALLAG-CRVYRESDMAEMVVK-QILELEPDNGAVYVLLCNIYAACKRWNDLRELRQM 579

Query: 361 -----FDSMPSPSVSSWNAML-------SSYSQSENHKEAI-KLFREMQFRGVKPD 403
                    P  S+   N  +        S+ Q++N    + K+ ++++  G  PD
Sbjct: 580 MMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPD 635


>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 189/625 (30%), Positives = 322/625 (51%), Gaps = 53/625 (8%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM--IRKA 216
           N+ L      G  + A  VF++M   + V++TA++ G    +   EA+ +F  M  +  A
Sbjct: 38  NSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPA 97

Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
           VS D+  +S VL     + CG  S++            +G+ +H   +K    + + + +
Sbjct: 98  VSPDTSVVSVVL-----KACGQSSNI-----------AYGESLHAYAVKTSLLSSVFVGS 141

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG--YGQKYQ---------------- 318
           SLLDMY + G ++ +  +FS +P R+ V+W  +I G  +  +Y+                
Sbjct: 142 SLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELS 201

Query: 319 -------STKAIELLQRMKSC----------GFEPDEVTSINMLVACVRSGDIKTGREMF 361
                  + KA   L+++K            GF+     + ++       G+++ G  +F
Sbjct: 202 DTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLF 261

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
           ++M    V SW +++ +Y++  + ++A++ F +M+   V P+  T A + S+CA++  L 
Sbjct: 262 ENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLV 321

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G+Q+H        +    V++ ++ +YS C + + A  +F  +   DI+ W+++I G S
Sbjct: 322 WGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYS 381

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
                 EAF +F  MRQ+   PT F+ A++LS    ++    GRQVHA     G   +  
Sbjct: 382 QAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNST 441

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           V S LI MY KCG+I  A + F+     + V+   MI+GYA++G   EA+ L++  +  G
Sbjct: 442 VRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG 501

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
             PD +TF+++LTAC+HSG +D+G   FN MQ  + + P  +HY CM+D L RAG   EA
Sbjct: 502 FSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEA 561

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           E +IDEM  K D V+W  LL +C+   ++   +RAAE +  LDP  +     LANIYSS 
Sbjct: 562 EKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSST 621

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           G  ++   VR+ M    ++K+P +S
Sbjct: 622 GNLEEAANVRKNMKAKGVIKEPGWS 646



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 151/584 (25%), Positives = 256/584 (43%), Gaps = 73/584 (12%)

Query: 45  LFDKMPHKDI----YSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGL 100
           L +K   K I    +  N+ L +   + +L  A ++FD+MP R++VSW  +I   V    
Sbjct: 21  LLEKPVEKTIQVVTFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANN 80

Query: 101 EEKALSVYNKMS--NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVA 158
            ++A+ +++ M   +    P    ++ V KA     ++ +G   H   +K  L  +++V 
Sbjct: 81  SDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVG 140

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS 218
           ++LL +Y + G  + +  VF EM   N VT+TA+++GL    R  E L  F  M      
Sbjct: 141 SSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEEL 200

Query: 219 IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSL 278
            D+ + +  L  CA                   +  +G+Q+H   I  GF+A + ++NSL
Sbjct: 201 SDTFTFAIALKACA----------------GLRQVKYGKQIHTHVIVRGFDATVWVANSL 244

Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
             MY + G+M     +F N+ ER VVSW  +I  Y +     KA+E   +M++    P+E
Sbjct: 245 ATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNE 304

Query: 339 VTSINMLVACV-----------------------------------RSGDIKTGREMFDS 363
            T   M  AC                                      G + +   +F  
Sbjct: 305 QTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQG 364

Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           M    + SW+ ++  YSQ+   +EA K F  M+  G KP    LA +LS    M +LE G
Sbjct: 365 MRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGG 424

Query: 424 KQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
           +QVHA +       ++ V S LI +YSKC   + A ++F      DIV   +MI G + +
Sbjct: 425 RQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEH 484

Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC---AKLSSSFQ-----GRQVHAQIEKDG 535
               EA   F++  +    P   +F +VL++C    +L   F        + + +  K+ 
Sbjct: 485 GKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEH 544

Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMH-GKNTVTWNEMI 578
           Y         ++++ C+ G +  A +  D M   K+ V W  ++
Sbjct: 545 Y-------GCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLL 581



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 201/455 (44%), Gaps = 88/455 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA+ ++  L    F+ + L+++Y +                               
Sbjct: 121 GESLHAYAVKTSLLSSVFVGSSLLDMYKRVGK---------------------------- 152

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E + ++F EMP RN V+W  +I+ LV  G  ++ L+ +++MS+   +    T A  
Sbjct: 153 ---IEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIA 209

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA   L  V++G++ H  VI  G D  ++VAN+L ++Y +CG  +  + +FE MSE + 
Sbjct: 210 LKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDV 269

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T+++    +     +A+E F  M    V  +  + +++   CA              
Sbjct: 270 VSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACA-------------- 315

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               SR V G+Q+HC    LG    L +SNS++ MY+  G +DSA V+F  +  R ++SW
Sbjct: 316 --SLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISW 373

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV--------------------------- 339
           + +I GY Q     +A +    M+  G +P +                            
Sbjct: 374 STIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFC 433

Query: 340 -----------TSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
                      T INM   C   G+IK   ++F+      + S  AM++ Y++    KEA
Sbjct: 434 FGLEQNSTVRSTLINMYSKC---GNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEA 490

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
           I LF +    G  PD  T   +L++C   G L+ G
Sbjct: 491 IDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLG 525



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 207/467 (44%), Gaps = 70/467 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H H++  G     ++ N L  +Y++C        LF+ M  +D+ SW ++      
Sbjct: 222 GKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSL------ 275

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                             +V++N       R G EEKA+  + KM N    P   T A++
Sbjct: 276 ------------------IVAYN-------RIGHEEKAVETFIKMRNSQVPPNEQTFATM 310

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
           F A  +L  +  G + H  V  +GL+ ++ V+N+++ +Y+ CG    A  +F+ M   + 
Sbjct: 311 FSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDI 370

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR----EGCGVESDV 242
           ++++ ++ G ++     EA + F  M +        +L+S+L V       EG       
Sbjct: 371 ISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEG------- 423

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+QVH L    G E +  + ++L++MY+K G++  A  IF       
Sbjct: 424 -------------GRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDD 470

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           +VS   MI GY +  +S +AI+L ++    GF PD VT I++L AC  SG +  G   F+
Sbjct: 471 IVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGFHYFN 530

Query: 363 SMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
            M       P+   +  M+    ++    EA K+  EM +   K D      +L +C A 
Sbjct: 531 LMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSW---KKDDVVWTTLLIACKAK 587

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLI---GIYSKCQRNELAERV 461
           G +E G++     L+    +D   A+ L+    IYS     E A  V
Sbjct: 588 GDIERGRRAAERILE----LDPTCATALVTLANIYSSTGNLEEAANV 630



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 187/429 (43%), Gaps = 85/429 (19%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ LH ++   GL D   + N ++++YS C    SA  LF  M  +DI SW+ I+   
Sbjct: 321 VWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGY 380

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
            ++   E A+K F         SW                      M   G  PT   LA
Sbjct: 381 SQAGFGEEAFKYF---------SW----------------------MRQSGPKPTDFALA 409

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S+   S  +  +E GR+ H L    GL++N  V + L+++Y+KCG  K A  +FEE    
Sbjct: 410 SLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRD 469

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V+ TAM++G A+  +  EA+++F   ++   S DSV+  SVL  C   G         
Sbjct: 470 DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSG--------- 520

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                              + LGF    H  N + + Y    +M  A+  +  + +    
Sbjct: 521 ------------------QLDLGF----HYFNLMQEKY----NMRPAKEHYGCMVD---- 550

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
               ++   G+  ++ K I+ +       ++ D+V    +L+AC   GDI+ GR   + +
Sbjct: 551 ----LLCRAGRLSEAEKMIDEMS------WKKDDVVWTTLLIACKAKGDIERGRRAAERI 600

Query: 365 PS--PSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               P+ ++    L++ YS + N +EA  + + M+ +GV  +    +I +  C +  +  
Sbjct: 601 LELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFV-- 658

Query: 422 SGKQVHAAS 430
           SG + H  S
Sbjct: 659 SGDRFHPLS 667


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 158/419 (37%), Positives = 248/419 (59%), Gaps = 1/419 (0%)

Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
           RM +  + P       ++   VR G +   R + D MP  SV SW  M+S YSQ+E H E
Sbjct: 35  RMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVE 94

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A+ LF +M   G  P+  TLA +L+SC+    +  GKQVH+  +KT      +V S L+ 
Sbjct: 95  ALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLD 154

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+K +  + A RVF  +PE D+V   ++I+G +   LD EA   F+Q+    M     +
Sbjct: 155 MYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVT 214

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           F T++++ + L+S   G+QVHA I +      + + ++LI+MY KCG +  +R+ FD M 
Sbjct: 215 FTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNML 274

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ V+WN M+ GY ++G G E + L+KD+    VKPD +T +A+L+ CSH GLVD G++
Sbjct: 275 ERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLSGCSHGGLVDEGLD 333

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
           IF+++  +        HY C+ID LGR+G   +A  LI+ MP +  P IW  LL +CR+H
Sbjct: 334 IFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVH 393

Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           ANV + +  A++L  ++P+N+  Y +L+NIY++ G W D+  VR+LM E  + K+P  S
Sbjct: 394 ANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQS 452



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 192/402 (47%), Gaps = 53/402 (13%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           ++A   G+ +HA ++        FL  RL+ +Y +C     A+++ D+M           
Sbjct: 23  RRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRM----------- 71

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
                               PER+VVSW  +IS   +     +AL ++ KM   G +P  
Sbjct: 72  --------------------PERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 111

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            TLA+V  + +    +  G++ H L++K   + +++V ++LL +YAK    + A  VF+ 
Sbjct: 112 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 171

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           + E + V+ TA++SG A+     EAL++FR +  + +  + V+ +++  V A  G     
Sbjct: 172 LPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTL--VTALSG----- 224

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
              A  D       +G+QVH L ++      + L NSL+DMY+K G +  +  +F N+ E
Sbjct: 225 --LASLD-------YGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLE 275

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
           RSVVSWN M+ GYG+     + I L + +     +PD VT + +L  C   G +  G ++
Sbjct: 276 RSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDI 334

Query: 361 FDSMPSPS-----VSSWNAMLSSYSQSENHKEAIKLFREMQF 397
           FD++            +  ++    +S   ++A+ L   M F
Sbjct: 335 FDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPF 376



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 185/385 (48%), Gaps = 58/385 (15%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
           GR+ H  +I       +++   L+++Y +CG    A  V + M E + V++T M+SG ++
Sbjct: 29  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 88

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
           T+R VEAL++F  M+R     +  +L++VL  C+    G +S               G+Q
Sbjct: 89  TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCS----GPQSI------------YQGKQ 132

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           VH L +K  FE+ + + +SLLDMYAK+ ++  A  +F  LPER VVS   +I+GY QK  
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVAC------------------------------ 348
             +A++L +++ S G + + VT   ++ A                               
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252

Query: 349 -----VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                 + G +   R +FD+M   SV SWNAML  Y +     E I LF+++  + VKPD
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPD 311

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTAS---HIDNYVASGLIGIYSKCQRNELAER 460
             TL  +LS C+  G+++ G  +    +K  S   H  +Y    +I +  +  R E A  
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY--GCIIDLLGRSGRLEKALN 369

Query: 461 VFHRIP-ELDIVCWNSMIAGLSLNS 484
           +   +P E     W S++    +++
Sbjct: 370 LIENMPFESTPSIWGSLLGACRVHA 394



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 146/271 (53%), Gaps = 2/271 (0%)

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
           +++C     L  G+QVHA  +        ++ + L+ +Y +C   + A  V  R+PE  +
Sbjct: 17  ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSV 76

Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
           V W +MI+G S     +EA   F +M +    P +++ ATVL+SC+   S +QG+QVH+ 
Sbjct: 77  VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 136

Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
           + K  + + +FVGS+L++MY K  +I  AR+ FD +  ++ V+   +I GYAQ G  +EA
Sbjct: 137 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 196

Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
           + L++ + + G++ + +TF  ++TA S    +D G ++ +++ L   +   +     +ID
Sbjct: 197 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQV-HALILRKELPFFVALQNSLID 255

Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
              + G    +  + D M  +   V W  +L
Sbjct: 256 MYSKCGKLLYSRRVFDNM-LERSVVSWNAML 285



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 138/261 (52%), Gaps = 19/261 (7%)

Query: 54  IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
           ++  +++L    KS++++ A ++FD +PER+VVS   +IS   + GL+E+AL ++ ++ +
Sbjct: 146 MFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYS 205

Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
           EG    H+T  ++  A + L  +++G++ H L+++  L   + + N+L+ +Y+KCG   +
Sbjct: 206 EGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLY 265

Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAR 233
           +  VF+ M E + V++ AM+ G  +     E + +F+  + K V  DSV+L +VL  C+ 
Sbjct: 266 SRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFK-DLHKEVKPDSVTLLAVLSGCSH 324

Query: 234 EGCGVES-DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
            G   E  D+F     + S  +H     C                ++D+  ++G ++ A 
Sbjct: 325 GGLVDEGLDIFDTVVKEQSALLHTGHYGC----------------IIDLLGRSGRLEKAL 368

Query: 293 VIFSNLPERSVVS-WNVMIAG 312
            +  N+P  S  S W  ++  
Sbjct: 369 NLIENMPFESTPSIWGSLLGA 389



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 90/165 (54%), Gaps = 1/165 (0%)

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
           +   +++C +  + ++GRQVHA++    Y   +F+G+ L+ MY +CG +  AR   D M 
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72

Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
            ++ V+W  MI GY+Q     EA+ L+  M+ +G  P++ T   +LT+CS    +  G +
Sbjct: 73  ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132

Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           + +S+ +    E  +   + ++D   ++ +  EA  + D +P +D
Sbjct: 133 V-HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERD 176


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 190/641 (29%), Positives = 325/641 (50%), Gaps = 57/641 (8%)

Query: 141 RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTD 200
           + H   +K+GL  + +V   L  LYA+     HA  +FEE        + A++       
Sbjct: 22  QLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81

Query: 201 RVVEALEMFRLMIRKAVS---IDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
           + VE L +F  M   AV+    D+ ++S  L  C+    G++         +  + +HG 
Sbjct: 82  KWVETLSLFHQMNADAVTEERPDNYTVSIALKSCS----GLQKL-------ELGKMIHG- 129

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
                 +K   ++D+ + ++L+++Y+K G M+ A  +F+  P+  VV W  +I GY Q  
Sbjct: 130 -----FLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNG 184

Query: 318 QSTKAIELLQRMKSC-GFEPDEVTSINMLVACVRSGDIKTGR------------------ 358
               A+    RM       PD VT ++   AC +  D   GR                  
Sbjct: 185 SPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLA 244

Query: 359 -----------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
                             +F  MP   + SW++M++ Y+ +     A+ LF EM  + ++
Sbjct: 245 NSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIE 304

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
            +R T+   L +CA+   LE GKQ+H  ++     +D  V++ L+ +Y KC   E A  +
Sbjct: 305 LNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIEL 364

Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
           F+R+P+ D+V W  + +G +   +  ++   F  M  N   P   +   +L++ ++L   
Sbjct: 365 FNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIV 424

Query: 522 FQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGY 581
            Q   +HA + K G+ N+ F+G++LIE+Y KC  I  A + F  +   + VTW+ +I  Y
Sbjct: 425 QQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAY 484

Query: 582 AQNGYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
             +G G+EA++L   M   S VKP+D+TFV+IL+ACSH+GL++ G+++F+ M  ++ + P
Sbjct: 485 GFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMP 544

Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
            ++HY  M+D LGR G   +A  +I+ MP +  P +W  LL +CR+H N+++ + AA  L
Sbjct: 545 NIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNL 604

Query: 701 FRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           F LDP ++  Y+LL+NIY     W D   +R L+ EN + K
Sbjct: 605 FLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKK 645



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 257/547 (46%), Gaps = 88/547 (16%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LH+  L+ GL  D+F+  +L  LY++          +  + H                  
Sbjct: 23  LHSQCLKVGLALDSFVVTKLNVLYAR----------YASLCH------------------ 54

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV---PTHITLASV 126
              A+KLF+E P + V  WN L+ +    G   + LS++++M+ +      P + T++  
Sbjct: 55  ---AHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIA 111

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            K+ + L  +E G+  HG  +K  +D +++V +AL+ LY+KCG    AV VF E  +P+ 
Sbjct: 112 LKSCSGLQKLELGKMIHGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDV 170

Query: 187 VTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           V +T++++G  +      AL  F R+++ + VS D V+L S    CA+            
Sbjct: 171 VLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQ-----------L 219

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           SD    R+VHG        + GF+  L L+NS+L++Y K G +  A  +F  +P + ++S
Sbjct: 220 SDFNLGRSVHG-----FVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIIS 274

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR------- 358
           W+ M+A Y      T A+ L   M     E + VT I+ L AC  S +++ G+       
Sbjct: 275 WSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAV 334

Query: 359 ----------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                       E+F+ MP   V SW  + S Y++     +++ 
Sbjct: 335 NYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLG 394

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +F  M   G +PD   L  IL++ + +GI++    +HA   K+    + ++ + LI +Y+
Sbjct: 395 VFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYA 454

Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFA 509
           KC   + A +VF  +   D+V W+S+IA    +    EA     QM   +++ P   +F 
Sbjct: 455 KCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFV 514

Query: 510 TVLSSCA 516
           ++LS+C+
Sbjct: 515 SILSACS 521



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 212/455 (46%), Gaps = 87/455 (19%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK++H   L+  +  D F+ + LIELYSKC   + A                        
Sbjct: 124 GKMIHG-FLKKKIDSDMFVGSALIELYSKCGQMNDA------------------------ 158

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN-EGFVPTHITLAS 125
                   K+F E P+ +VV W ++I+   +NG  E AL+ +++M   E   P  +TL S
Sbjct: 159 -------VKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVS 211

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A   L D   GR  HG V + G D  + +AN++L+LY K G  + A  +F EM   +
Sbjct: 212 AASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKD 271

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            +++++M++  A       AL +F  MI K + ++ V++ S L  CA             
Sbjct: 272 IISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACAS------------ 319

Query: 246 SDNKFSRNV-HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                S N+  G+Q+H L +  GFE D+ +S +L+DMY K    ++A  +F+ +P++ VV
Sbjct: 320 -----SSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVV 374

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-----------CVRSGD 353
           SW V+ +GY +   + K++ +   M S G  PD +  + +L A           C+ +  
Sbjct: 375 SWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFV 434

Query: 354 IKTG------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
            K+G                         ++F  +    V +W++++++Y      +EA+
Sbjct: 435 TKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEAL 494

Query: 390 KLFREM-QFRGVKPDRTTLAIILSSCAAMGILESG 423
           KL  +M     VKP+  T   ILS+C+  G++E G
Sbjct: 495 KLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEG 529



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 179/348 (51%), Gaps = 22/348 (6%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N+IL+   K+  +  A  LF EMP ++++SW+++++    NG E  AL+++N+M ++   
Sbjct: 245 NSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIE 304

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
              +T+ S  +A  +  ++E G++ H L +  G + +I V+ AL+ +Y KC   ++A+ +
Sbjct: 305 LNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIEL 364

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
           F  M + + V++  + SG A+     ++L +F  M+      D+++L  +L   +  G  
Sbjct: 365 FNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIV 424

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
            ++                  +H    K GF+ +  +  SL+++YAK   +D+A  +F  
Sbjct: 425 QQALC----------------LHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKG 468

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDEVTSINMLVACVRSGDIKT 356
           L    VV+W+ +IA YG   Q  +A++L  +M +    +P++VT +++L AC  +G I+ 
Sbjct: 469 LRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEE 528

Query: 357 GREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           G +MF  M +     P++  +  M+    +     +A+ +   M  + 
Sbjct: 529 GIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQA 576



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 129/275 (46%), Gaps = 18/275 (6%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           DI    A++    K    E A +LF+ MP+++VVSW  L S     G+  K+L V+  M 
Sbjct: 341 DITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNML 400

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           + G  P  I L  +  AS+ L  V+     H  V K G D N ++  +L+ LYAKC    
Sbjct: 401 SNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSID 460

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVC 231
           +A  VF+ +   + VT++++++      +  EAL++   M   + V  + V+  S+L  C
Sbjct: 461 NANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSAC 520

Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
           +  G  +E  +              +  H +  +     ++     ++D+  + G++D A
Sbjct: 521 SHAGL-IEEGI--------------KMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKA 565

Query: 292 EVIFSNLPERSVVS-WNVMIAGYGQKYQSTKAIEL 325
             + +N+P ++    W  ++ G  + +Q+ K  EL
Sbjct: 566 LDMINNMPMQAGPHVWGALL-GACRIHQNIKIGEL 599



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 5/110 (4%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           LHA + ++G  ++ F+   LIELY+KC++  +A  +F  + H D+ +W++I++A      
Sbjct: 430 LHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQ 489

Query: 70  LEFAYKLFDEMPER-----NVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
            E A KL  +M        N V++ +++SA    GL E+ + +++ M NE
Sbjct: 490 GEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNE 539


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 191/630 (30%), Positives = 300/630 (47%), Gaps = 90/630 (14%)

Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEP--NEVTFTAMMSGLAKTDRVVEALEMFR-LMIR 214
           A +L++ YA  G    AV  F+ + +   + V   A++S  A+      A+ +FR L+  
Sbjct: 91  ATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
            ++  D  S +++L        G   ++  +         H  Q+ C  +K G    L +
Sbjct: 151 GSLRPDDYSFTALL-----SAAGHLPNISVR---------HCAQLQCSVLKSGAGGVLSV 196

Query: 275 SNSLLDMYAKNGDMDS---AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           SN+L+ +Y K   +++   A  +   +P++  ++W  M+ GY                  
Sbjct: 197 SNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGY------------------ 238

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                            VR GD+   R +F+ +       WNAM+S Y  S    EA +L
Sbjct: 239 -----------------VRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFEL 281

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA----SGLIG 447
           FR M    V  D  T   +LS+CA  G    GK VH    +   +     A    + L+ 
Sbjct: 282 FRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVT 341

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNS-------------------------------M 476
           +YSKC    +A R+F  +   D+V WN+                               M
Sbjct: 342 LYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVM 401

Query: 477 IAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
           ++G        +A   F +MR  ++ P  +++A  +S+C +L S   G+Q+H  + + G+
Sbjct: 402 VSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGF 461

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
                 G+ALI MY +CG +  A   F +M   ++V+WN MI    Q+G+G EA+ L+  
Sbjct: 462 EGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDR 521

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M+A G+ PD I+F+ +LTAC+HSGLVD G + F SM+ D G+ P  DHYT +ID LGRAG
Sbjct: 522 MVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAG 581

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
              EA  LI  MP +  P IWE +LS CR   ++ L   AA++LF++ P++   Y LL+N
Sbjct: 582 RIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSN 641

Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            YS+ GRW D   VR+LM +  + K+P  S
Sbjct: 642 TYSAAGRWVDAARVRKLMRDRGVKKEPGCS 671



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 172/622 (27%), Positives = 278/622 (44%), Gaps = 93/622 (14%)

Query: 8   KLLHAHILRNGLF---DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + LHA +L + L        L  RLI LY+   +  +A  LF   P     +  ++++A 
Sbjct: 41  RCLHARLLTSALLHAPPHPHLTLRLIHLYTLSGDLPAAATLFRADPCP--VAATSLVAAY 98

Query: 65  CKSDDLEFAYKLFDEMPE--RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHI 121
             +  L  A   FD +P+  R+ V  N +ISA  R      A++V+  +   G + P   
Sbjct: 99  AAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDY 158

Query: 122 TLASVFKASTAL--LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC----------- 168
           +  ++  A+  L  + V H  +    V+K G    + V+NAL++LY KC           
Sbjct: 159 SFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARK 218

Query: 169 -----------GWTKHAV------------PVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
                       WT   V             VFEE+    +V + AM+SG   +  VVEA
Sbjct: 219 VLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEA 278

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
            E+FR M+ + V +D  + +SVL  CA  G       FA       ++VHG Q+  L   
Sbjct: 279 FELFRRMVLERVPLDEFTFTSVLSACANAG------FFAH-----GKSVHG-QITRLQPN 326

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
              EA L ++N+L+ +Y+K G++  A  IF N+  + VVSWN +++GY +     KA+E+
Sbjct: 327 FVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEV 386

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                              F+ MP  +  SW  M+S Y      
Sbjct: 387 -----------------------------------FEEMPYKNELSWMVMVSGYVHGGFS 411

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++A+KLF  M+   VKP   T A  +S+C  +G L+ GKQ+H   ++      N   + L
Sbjct: 412 EDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNAL 471

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           I +Y++C   + A  +F  +P +D V WN+MI+ L  +    EA   F +M    +YP +
Sbjct: 472 ITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDR 531

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            SF TVL++C       +G Q    +++D G +      + LI++  + G I  AR    
Sbjct: 532 ISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIK 591

Query: 565 MMHGKNTVT-WNEMIHGYAQNG 585
            M  + T + W  ++ G   +G
Sbjct: 592 TMPFEPTPSIWEAILSGCRTSG 613



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 211/496 (42%), Gaps = 65/496 (13%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNN---THSAQHLFDKMPHKDIYSWNAILSAQCK 66
           L   +L++G      + N L+ LY KC     T  A+ + D+MP KD  +W  ++    +
Sbjct: 181 LQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVR 240

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+  A  +F+E+  +  V WN +IS  V +G+  +A  ++ +M  E       T  SV
Sbjct: 241 RGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSV 300

Query: 127 FKASTALLDVEHGRRCHGLVIKIG----LDKNIYVANALLSLYAKCG------------- 169
             A        HG+  HG + ++      +  + V NAL++LY+KCG             
Sbjct: 301 LSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMK 360

Query: 170 ------WTK------------HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
                 W               AV VFEEM   NE+++  M+SG        +AL++F  
Sbjct: 361 SKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNR 420

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M  + V     + +  +  C   G                   HG+Q+H   ++LGFE  
Sbjct: 421 MRAEDVKPCDYTYAGAISACGELGS----------------LKHGKQLHGHLVQLGFEGS 464

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
               N+L+ MYA+ G +  A ++F  +P    VSWN MI+  GQ     +A+EL  RM +
Sbjct: 465 NSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVA 524

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHK 386
            G  PD ++ + +L AC  SG +  G + F+SM       P    +  ++    ++    
Sbjct: 525 EGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIG 584

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK-TASHIDNYVASGL 445
           EA  L + M F   +P  +    ILS C   G +E G        K T  H   Y+   L
Sbjct: 585 EARDLIKTMPF---EPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYIL--L 639

Query: 446 IGIYSKCQRNELAERV 461
              YS   R   A RV
Sbjct: 640 SNTYSAAGRWVDAARV 655



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 23/225 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK LH H+++ G        N LI +Y++C     A  +F  MP+ D  SWNA++SA  +
Sbjct: 449 GKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQ 508

Query: 67  SDDLEFAYKLFDEM------PERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPT 119
                 A +LFD M      P+R  +S+  +++A   +GL ++    +  M  + G +P 
Sbjct: 509 HGHGREALELFDRMVAEGIYPDR--ISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPG 566

Query: 120 HITLASVFKASTALLDV--EHGR--RCHGLVIKIGLDKNIYVANALLSLYAKCG---WTK 172
                      T L+D+    GR      L+  +  +    +  A+LS     G      
Sbjct: 567 E-------DHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGA 619

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
           HA     +M+  ++ T+  + +  +   R V+A  + +LM  + V
Sbjct: 620 HAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGV 664


>gi|449453244|ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Cucumis sativus]
          Length = 735

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 205/725 (28%), Positives = 365/725 (50%), Gaps = 57/725 (7%)

Query: 75  KLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE---GFVPTHITLASVFKAST 131
           K   E   ++++ +N L++ L R+     +L ++ ++ +       P H  L++      
Sbjct: 12  KTIAESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAVCA 71

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
              D+  G + HG  I+ GL    +VAN +LSLYAK          F+E+ +P+  ++T 
Sbjct: 72  NFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWTT 131

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVS-------------IDSVSLSSVLGVCAREGCGV 238
           ++S   K   +  A EMF +M +  V+             +D V++++   +  + G   
Sbjct: 132 LLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEM-HKMGVKP 190

Query: 239 ESDVFAQSDNKFSRNVH--GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
           ++  FA   +  ++ +   G+QVH   IK G+     + N+L+ MY    +++ A  +F 
Sbjct: 191 DNYSFACILSLCTKEIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVFE 250

Query: 297 NLPE--RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------ 348
                 R  +++NVMI G     ++ +A+ + + MK     P E+T ++++ +C      
Sbjct: 251 GTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSIIQVA 310

Query: 349 --VRSGDIKTGREMFDSMPSPSVS------------------------SWNAMLSSYSQS 382
             V S  IK G E F  + + +++                        SWNA++SSY Q 
Sbjct: 311 QQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAIISSYVQG 370

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
              K A+  F +MQ  G+ PD  T   +L     + I+E    VHA   K    +   + 
Sbjct: 371 NFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIVE---MVHAYVYKNGLILIIEIL 427

Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
           + L+  Y+KC++ + + +VF  I   +I+ WN++I G  LN L ++A   F ++  +++ 
Sbjct: 428 NALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHFSKLIMSKLK 487

Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
           P+ F+ + VLS CA +S+   G+Q+H  I + G  ++  + + LI MY KCG +  + + 
Sbjct: 488 PSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMYSKCGLLGWSLRT 547

Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI-ASGVKPDDITFVAILTACSHSGL 621
           F++M  ++ V+WN +I  YAQ+G G EAV  +K M     + PD  TF  IL+ACSH+GL
Sbjct: 548 FNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFTTILSACSHAGL 607

Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
           V+   +I + M +D+   P +D  +C++D +GR+G+  +AE +I+     +   +W  L 
Sbjct: 608 VEEACQILDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQAESVIESAQYGEHTHVWWALF 667

Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           S+C  H N+RL +  A  L   +  N + Y +L+NIY+S G W++   VREL+ +   +K
Sbjct: 668 SACAAHENLRLGRIVARILLEKERDNPSVYVVLSNIYASAGCWEEAANVRELIKKTGSMK 727

Query: 742 DPAYS 746
            P  S
Sbjct: 728 QPGCS 732



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 159/545 (29%), Positives = 266/545 (48%), Gaps = 55/545 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  LH + +R+GL     + N ++ LY+K  +  S +  F ++   D+YSW  +LSA  K
Sbjct: 79  GSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWTTLLSACTK 138

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E+A ++FD MP+ NV  WN +I+    +GL+  A++ + +M   G  P + + A +
Sbjct: 139 MGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVKPDNYSFACI 198

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE--EMSEP 184
               T  ++ + GR+ H  VIK G  +   V NAL+++Y      + A  VFE  E    
Sbjct: 199 LSLCTKEIE-DLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVFEGTESEVR 257

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           +++T+  M+ GL    R  EAL MF+ M R  +S   ++  S++  C+            
Sbjct: 258 DQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSIIQV-------- 309

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                       QQVH   IKLGFE+   + NS + MY   G+  +A  +F  L E+ ++
Sbjct: 310 -----------AQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLI 358

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT------------------------ 340
           SWN +I+ Y Q      A+    +M+  G  PDE T                        
Sbjct: 359 SWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIVEMVHAYVYKN 418

Query: 341 -------SINMLV-ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                   +N LV A  +   +K   ++F  + S ++ SWN ++  +  +    +A++ F
Sbjct: 419 GLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHF 478

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
            ++    +KP   TL+I+LS CA +  L+ GKQ+H   L++ +  +  + +GLI +YSKC
Sbjct: 479 SKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMYSKC 538

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR-QNEMYPTQFSFATV 511
                + R F+ + E DIV WNS+I+  + +    EA   FK M+    + P Q +F T+
Sbjct: 539 GLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFTTI 598

Query: 512 LSSCA 516
           LS+C+
Sbjct: 599 LSACS 603



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 163/341 (47%), Gaps = 24/341 (7%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYSW----NAILSAQCKSDDLEFAYKLFDEMPERN 84
            + + S C+    AQ +  +       S+    N+ ++      + + A  +F  + E++
Sbjct: 297 FVSIMSSCSIIQVAQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKD 356

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
           ++SWN +IS+ V+    + A+  + +M   G  P   T  S+   S  +  VE     H 
Sbjct: 357 LISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIVE---MVHA 413

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
            V K GL   I + NAL+S YAKC   K ++ VF E++  N +++  ++ G       ++
Sbjct: 414 YVYKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQ 473

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           ALE F  +I   +   + +LS VL +CA               N  + ++ G+Q+H   +
Sbjct: 474 ALEHFSKLIMSKLKPSTFTLSIVLSICA---------------NISTLDI-GKQIHGYIL 517

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           + G  ++  L N L+ MY+K G +  +   F+ + ER +VSWN +I+ Y Q  Q  +A++
Sbjct: 518 RSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVD 577

Query: 325 LLQRMKSC-GFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
             + M+      PD+ T   +L AC  +G ++   ++ D M
Sbjct: 578 CFKAMQDMPSIMPDQATFTTILSACSHAGLVEEACQILDIM 618



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 5/110 (4%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +ILR+G   +T LCN LI +YSKC     +   F+ M  +DI SWN+I+SA  +
Sbjct: 509 GKQIHGYILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQ 568

Query: 67  SDDLEFA---YKLFDEMPE--RNVVSWNNLISALVRNGLEEKALSVYNKM 111
               + A   +K   +MP    +  ++  ++SA    GL E+A  + + M
Sbjct: 569 HGQGKEAVDCFKAMQDMPSIMPDQATFTTILSACSHAGLVEEACQILDIM 618


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 173/562 (30%), Positives = 283/562 (50%), Gaps = 74/562 (13%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKN--GDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           QQVHC  IK G  A+  L N ++     +  GD   A  +F  +PE ++  WN MI GY 
Sbjct: 56  QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYS 115

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTS--------------------------------- 341
           +       + L   M   G +PD  T                                  
Sbjct: 116 RLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVF 175

Query: 342 -----INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
                + M + C   G + T R +FD  P   V +WN ++S+Y++    +E+ +LF  M+
Sbjct: 176 VHTALVQMYLLC---GQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVME 232

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC---- 452
            + V P   TL ++LS+C+ +  L +GK+VH+         +  + + +I +Y+ C    
Sbjct: 233 DKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMD 292

Query: 453 ----------QRN-----------------ELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
                      R+                 ++A   F ++PE D V W +MI G   ++ 
Sbjct: 293 SALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNR 352

Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
             EA   F+ M+   + P +F+  +VL++CA L +   G  +   I+++   ND+FV +A
Sbjct: 353 FKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNA 412

Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
           LI+MY KCGD+  A   F  M  ++  TW  MI G A NG+G++A+ ++ +M+ + + PD
Sbjct: 413 LIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPD 472

Query: 606 DITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLI 665
           +IT++ +L+AC+H+GLVD G + F  M   HG+EP + HY C++D L RAG   EA  +I
Sbjct: 473 EITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVI 532

Query: 666 DEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWD 725
           + MP K + ++W  LL+ CR++    +A+   +++  L+P N A Y LL NIY++  RW+
Sbjct: 533 ENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWN 592

Query: 726 DLRAVRELMSENCIVKDPAYSL 747
           DLR +R++M +  I K P  SL
Sbjct: 593 DLRELRQMMMDKGIKKXPGCSL 614



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 134/547 (24%), Positives = 239/547 (43%), Gaps = 92/547 (16%)

Query: 29  LIELYSKCNNTHSAQHLFDKMPHKDIYS----WNAILSAQCKSD--DLEFAYKLFDEMPE 82
           LI L   C +    Q +  +   K + +     N +++  C  +  D ++A +LFDE+PE
Sbjct: 42  LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 101

Query: 83  RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRC 142
            N+  WN +I    R    +  +S+Y +M   G  P   T   +FK  T  + +E+GR+ 
Sbjct: 102 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 161

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           HG V+K GL  N++V  AL+ +Y  CG    A  VF+   + + +T+  ++S   K  + 
Sbjct: 162 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKF 221

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
            E+  +F +M  K V   +V+L  VL  C+                K      G++VH  
Sbjct: 222 EESRRLFLVMEDKQVLPTTVTLVLVLSACS----------------KLKDLRTGKKVHSY 265

Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN------------------------- 297
                 E++L L N+++DMYA  G+MDSA  IF +                         
Sbjct: 266 VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVA 325

Query: 298 ------LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-- 349
                 +PE+  VSW  MI GY +  +  +A+EL + M++   +PDE T +++L AC   
Sbjct: 326 RNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHL 385

Query: 350 ---------------------------------RSGDIKTGREMFDSMPSPSVSSWNAML 376
                                            + GD+     +F  M      +W AM+
Sbjct: 386 GALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMI 445

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
              + + + ++A+ +F  M    + PD  T   +LS+C   G+++ G++ +   + +   
Sbjct: 446 VGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK-YFLRMTSQHG 504

Query: 437 IDNYVA--SGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFF 493
           I+  +A    L+ + ++  R + A  V   +P + + + W +++AG  +      A M  
Sbjct: 505 IEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVV 564

Query: 494 KQMRQNE 500
           KQ+ + E
Sbjct: 565 KQILELE 571



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 216/490 (44%), Gaps = 88/490 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH H+L++GL  + F+   L+++Y  C    +A+ +FD  P  D+ +WN I+SA  K
Sbjct: 158 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 217

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               E + +LF  M ++ V                               +PT +TL  V
Sbjct: 218 VGKFEESRRLFLVMEDKQV-------------------------------LPTTVTLVLV 246

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG----------------- 169
             A + L D+  G++ H  V    ++ N+ + NA++ +YA CG                 
Sbjct: 247 LSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDI 306

Query: 170 --WTK------------HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
             WT              A   F++M E + V++TAM+ G  +++R  EALE+FR M   
Sbjct: 307 ISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQAT 366

Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
            V  D  ++ SVL  CA  G  +E                G+ +     +   + DL + 
Sbjct: 367 NVKPDEFTMVSVLTACAHLG-ALEL---------------GEWIRTYIDRNKIKNDLFVR 410

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N+L+DMY K GD+D AE IF  + +R   +W  MI G        KA+++   M      
Sbjct: 411 NALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASIL 470

Query: 336 PDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIK 390
           PDE+T I +L AC  +G +  GR+ F  M S     P+++ +  ++   +++   KEA +
Sbjct: 471 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 530

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
           +   M    +K +      +L+ C      +  + V    L+     +  V   L  IY+
Sbjct: 531 VIENMP---IKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD-NGAVYVLLCNIYA 586

Query: 451 KCQR-NELAE 459
            C+R N+L E
Sbjct: 587 ACKRWNDLRE 596



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 198/416 (47%), Gaps = 35/416 (8%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            GK +H+++    +  +  L N +I++Y+ C    SA  +F  M ++DI SW  I+S   
Sbjct: 258 TGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT 317

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
              +++ A   FD+MPE++ VSW  +I   +R+   ++AL ++  M      P   T+ S
Sbjct: 318 NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVS 377

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   L  +E G      + +  +  +++V NAL+ +Y KCG    A  +F EMS+ +
Sbjct: 378 VLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRD 437

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           + T+TAM+ GLA      +AL+MF  M++ ++  D ++   VL  C   G      +  +
Sbjct: 438 KFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG------LVDK 491

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VV 304
               F R         +T + G E ++     L+D+ A+ G +  A  +  N+P ++  +
Sbjct: 492 GRKYFLR---------MTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSI 542

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE----VTSINMLVACVRSGDIKTGREM 360
            W  ++AG  + Y+ +   E++ + +    EPD     V   N+  AC R  D++  R+M
Sbjct: 543 VWGALLAG-CRVYRESDMAEMVVK-QILELEPDNGAVYVLLCNIYAACKRWNDLRELRQM 600

Query: 361 -----FDSMPSPSVSSWNAML-------SSYSQSENHKEAI-KLFREMQFRGVKPD 403
                    P  S+   N  +        S+ Q++N    + K+ ++++  G  PD
Sbjct: 601 MMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPD 656


>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 189/567 (33%), Positives = 301/567 (53%), Gaps = 81/567 (14%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKN--GDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           +Q+     ++G E D    N L+   A +  G++  AE IF+ + + S+  +NVM+  Y 
Sbjct: 114 KQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYA 173

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINML--VAC---VRSGD------IKTG------ 357
           ++    K + L Q+++  G  PD  T   +L  + C   VR G+      +KTG      
Sbjct: 174 KRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNY 233

Query: 358 ------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                             +++FD M +    SWN M+S Y +    ++AI  FREMQ  G
Sbjct: 234 VYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEG 293

Query: 400 -VKPDRTTLAIILSSCAAMGILESGKQVH---AASLKTASHIDNYVASGLIGIYSKCQRN 455
             KPD  T+   LS+C A+  LE G ++H      L   + IDN     L+ +Y+KC   
Sbjct: 294 NEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDN----ALLDMYAKCGCL 349

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDI---------------------------- 487
            +A  +F  +   +++CW SMI+G  +N  D+                            
Sbjct: 350 NIARNIFDEMSMKNVICWTSMISGY-INCGDLREARDLFDKSPVRDVVLWTAMINGYVQF 408

Query: 488 ----EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               +A   F++M+  ++ P +F+  T+L+ CA+L +  QG+ +H  ++++    D+ VG
Sbjct: 409 HHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVG 468

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           +ALIEMY KCG +  + + F  +  K+T +W  +I G A NG   EA+RL+ +M   G K
Sbjct: 469 TALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAK 528

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           PDDITF+ +L+ACSH GLV+ G   FNSM+  H +EP ++HY C+ID LGRAG   EAE 
Sbjct: 529 PDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEE 588

Query: 664 LIDEMPCKDDPVI---WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           LI E+P ++  ++   +  LLS+CR+H NV + +R A++L  ++  +S+ ++LLANIY+S
Sbjct: 589 LIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYAS 648

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYSL 747
           + RW+D + VR  M E  + K P  SL
Sbjct: 649 VDRWEDAKKVRRKMKELGVKKMPGCSL 675



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 217/471 (46%), Gaps = 59/471 (12%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D Y +N+++    +  ++E A KLFDEM  R+ VSWN +IS  VR    E A++ + +M 
Sbjct: 231 DNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQ 290

Query: 113 NEGF-VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
            EG   P   T+ S   A TAL ++E G   H  V K  L     + NALL +YAKCG  
Sbjct: 291 QEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-ELGFTTRIDNALLDMYAKCGCL 349

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA-------------------------- 205
             A  +F+EMS  N + +T+M+SG      + EA                          
Sbjct: 350 NIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFH 409

Query: 206 -----LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
                + +FR M  + +  D  ++ ++L  CA+ G  +E                G+ +H
Sbjct: 410 HFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLG-ALE---------------QGKWIH 453

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
               +     D+ +  +L++MY+K G +D +  IF  L ++   SW  +I G     +++
Sbjct: 454 GYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTS 513

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAM 375
           +A+ L   M+  G +PD++T I +L AC   G ++ GR  F+SM       P V  +  +
Sbjct: 514 EALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCV 573

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +    ++    EA +L +E+     +        +LS+C     ++ G+++ A  L+   
Sbjct: 574 IDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERL-AKKLENIE 632

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
             D+ + + L  IY+   R E A++V  ++ EL +      + G SL  +D
Sbjct: 633 SCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGV----KKMPGCSLIEVD 679



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 200/450 (44%), Gaps = 53/450 (11%)

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
           +L +A K+F+ + + ++  +N ++    + G+  K L ++ ++  +G  P   T   V K
Sbjct: 146 NLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLK 205

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           A   L DV  G +  G ++K G+D + YV N+L+ +Y +    ++A  +F+EM+  + V+
Sbjct: 206 AIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVS 265

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCA---REGCGVESDVFA 244
           +  M+SG  +  R  +A+  FR M ++     D  ++ S L  C        G E   + 
Sbjct: 266 WNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV 325

Query: 245 QSDNKFSRNVHG------QQVHCLTIKLGFEADLHLSN-----SLLDMYAKNGDMDSAEV 293
           + +  F+  +         +  CL I      ++ + N     S++  Y   GD+  A  
Sbjct: 326 RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARD 385

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +F   P R VV W  MI GY Q +    A+ L + M+    +PD+ T + +L  C + G 
Sbjct: 386 LFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGA 445

Query: 354 IKTGR-----------------------------------EMFDSMPSPSVSSWNAMLSS 378
           ++ G+                                   E+F  +     +SW +++  
Sbjct: 446 LEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICG 505

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
            + +    EA++LF EM+  G KPD  T   +LS+C+  G++E G++    S+K    I+
Sbjct: 506 LAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFF-NSMKKVHRIE 564

Query: 439 NYVA--SGLIGIYSKCQRNELAERVFHRIP 466
             V     +I +  +    + AE +   IP
Sbjct: 565 PKVEHYGCVIDLLGRAGLLDEAEELIQEIP 594



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 231/505 (45%), Gaps = 81/505 (16%)

Query: 318 QSTKAIELLQRMKS----CGFEPDEVTSINMLVACVRS--GDIKTGREMFDSMPSPSVSS 371
           ++ K+++ L++++S     G E D  T   ++  C  S  G+++   ++F+ +  PS+  
Sbjct: 105 RNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFV 164

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           +N M+  Y++    ++ + LF++++  G+ PD  T   +L +   +  +  G++V    +
Sbjct: 165 YNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV 224

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           KT   +DNYV + LI +Y +    E A+++F  +   D V WN MI+G        +A  
Sbjct: 225 KTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAIN 284

Query: 492 FFKQMRQ--NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIE 548
            F++M+Q  NE  P + +  + LS+C  L +   G ++H  + K+ G+   I   +AL++
Sbjct: 285 TFREMQQEGNEK-PDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRI--DNALLD 341

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ------------------------- 583
           MY KCG +  AR  FD M  KN + W  MI GY                           
Sbjct: 342 MYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAM 401

Query: 584 -NGY-----GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG------------ 625
            NGY      D+AV L+++M    +KPD  T V +LT C+  G ++ G            
Sbjct: 402 INGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRI 461

Query: 626 ----------VEIFNSMQ-LDHGVEPILD-------HYTCMIDCLGRAGHFHEAEMLIDE 667
                     +E+++    +D  +E   +        +T +I  L   G   EA  L  E
Sbjct: 462 TMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSE 521

Query: 668 MP---CKDDPVIWEVLLSSCRLHANVRLAKR---AAEELFRLDPKNSAPYSLLANIYSSL 721
           M     K D + +  +LS+C     V   +R   + +++ R++PK    Y  + ++    
Sbjct: 522 MERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPK-VEHYGCVIDLLGRA 580

Query: 722 GRWDDLRA-VRELMSENCIVKDPAY 745
           G  D+    ++E+  ENC +  P Y
Sbjct: 581 GLLDEAEELIQEIPIENCEIVVPLY 605



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 142/293 (48%), Gaps = 16/293 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H ++ R  L   T + N L+++Y+KC   + A+++FD+M  K++  W +++S    
Sbjct: 318 GDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYIN 376

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             DL  A  LFD+ P R+VV W  +I+  V+    + A++++ +M  +   P   T+ ++
Sbjct: 377 CGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTL 436

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 L  +E G+  HG + +  +  ++ V  AL+ +Y+KCG    ++ +F E+ + + 
Sbjct: 437 LTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDT 496

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++T+++ GLA   +  EAL +F  M R     D ++   VL  C+  G   E   F  S
Sbjct: 497 ASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNS 556

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
             K  R                E  +     ++D+  + G +D AE +   +P
Sbjct: 557 MKKVHR---------------IEPKVEHYGCVIDLLGRAGLLDEAEELIQEIP 594



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 166/328 (50%), Gaps = 15/328 (4%)

Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL--AERVFHRIPEL 468
           L +C +M  L   KQ+ +   +     D    + L+   +      L  AE++F+ + + 
Sbjct: 104 LRNCKSMDQL---KQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 160

Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
            +  +N M+   +   +  +  + F+Q+R++ ++P  F++  VL +   L    QG +V 
Sbjct: 161 SLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVR 220

Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
             I K G   D +V ++LI+MY +  ++  A++ FD M  +++V+WN MI GY +    +
Sbjct: 221 GFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFE 280

Query: 589 EAVRLYKDMIASG-VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
           +A+  +++M   G  KPD+ T V+ L+AC+    +++G EI N ++ + G    +D+   
Sbjct: 281 DAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDN--A 338

Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP-K 706
           ++D   + G  + A  + DEM  K + + W  ++S      ++R A+    +LF   P +
Sbjct: 339 LLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISGYINCGDLREAR----DLFDKSPVR 393

Query: 707 NSAPYSLLANIYSSLGRWDDLRAV-REL 733
           +   ++ + N Y     +DD  A+ RE+
Sbjct: 394 DVVLWTAMINGYVQFHHFDDAVALFREM 421


>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 575

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 179/521 (34%), Positives = 278/521 (53%), Gaps = 43/521 (8%)

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
           +K G++ D ++ N +L +YAK G ++ A  +F  +P+R+V  WNVMI+GY +     +A 
Sbjct: 54  LKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEAS 113

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
            L   M       + +T   M+    + G++KT R  FD MP  SV SWNAMLS Y+Q  
Sbjct: 114 TLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGG 173

Query: 384 NHKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMG-ILESGKQVHAASLKTASHIDNYV 441
             +E I+LF +M   G V+PD TT A ++SSC+++G    S   V     K     + +V
Sbjct: 174 APEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFV 233

Query: 442 ASGLIGIYSKCQRNELAERVFH----------------------------------RIPE 467
            + L+ +++KC   E A ++F                                   ++P+
Sbjct: 234 KTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQ 293

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE--MYPTQFSFATVLSSCAKLSSSFQGR 525
            D V WNSMIAG + N    +A   F++M  +E    P + +  +V S+C  L     G 
Sbjct: 294 RDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGN 353

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
              + ++ +     I V ++LI MY +CG +  A   F  M  ++ V++N +I G+A++G
Sbjct: 354 WAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHG 413

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
           +G E++ L   M   G++PD IT++AILTACSH+GL+D G  +F S++      P +DHY
Sbjct: 414 HGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKF-----PDVDHY 468

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
            CMID LGRAG   EA  LI  MP +    I+  LL++  +H  V L + AA +LF+++P
Sbjct: 469 ACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEP 528

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            NS  Y+LL+NIY+S GRW +   VR+ M +  + K    S
Sbjct: 529 HNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLS 569



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 244/528 (46%), Gaps = 81/528 (15%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           K A     L  AH+L++G   D ++ N ++ +Y+K      A+ LFD+MP + +  WN +
Sbjct: 40  KSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVM 99

Query: 61  LS-----------------------------------AQCKSDDLEFAYKLFDEMPERNV 85
           +S                                      K  +L+ A   FD+MPER+V
Sbjct: 100 ISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSV 159

Query: 86  VSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLASVFKASTALLDVEHGRRCHG 144
           VSWN ++S   + G  E+ + ++N M + G V P   T A+V  + ++L     G  C  
Sbjct: 160 VSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSL-----GDPCLS 214

Query: 145 LVI------KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS---EPNEVTFTAMMSG 195
             I      K+G   N +V  ALL ++AKCG  + A  +FE++      + V + AM+S 
Sbjct: 215 ESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISA 274

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-----DVFAQSDNKF 250
            A+   +  A  +F  M ++    D+VS +S++    + G   ++     ++ +  D++ 
Sbjct: 275 YARVGDLPSAKHLFDKMPQR----DTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRK 330

Query: 251 SRNVHGQQV-----HCLTIKLG-----------FEADLHLSNSLLDMYAKNGDMDSAEVI 294
              V    V     H   + LG            +  + + NSL++MY++ G M  A +I
Sbjct: 331 PDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLI 390

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  +  R +VS+N +I+G+ +     ++IELL +MK  G EPD +T I +L AC  +G +
Sbjct: 391 FQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLL 450

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
             G+ +F+S+  P V  +  M+    ++   +EA+KL + M    ++P       +L++ 
Sbjct: 451 DEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMP---MEPHAGIYGSLLNAT 507

Query: 415 AAMGILESGKQVHAASLKTASH-IDNYVASGLIGIYSKCQRNELAERV 461
           +    +E G+   A   K   H   NY    L  IY+   R +  ++V
Sbjct: 508 SIHKQVELGELAAAKLFKVEPHNSGNYAL--LSNIYASAGRWKEGDKV 553



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 222/481 (46%), Gaps = 98/481 (20%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
           H+      +D Y  N IL    K   +EFA KLFDEMP+R V  WN +IS   + G EE+
Sbjct: 52  HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 111

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           A ++++ M ++                                    + +N+     +++
Sbjct: 112 ASTLFHVMGDQE-----------------------------------ISRNVITWTTMIT 136

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSV 222
            +AK G  K A   F++M E + V++ AM+SG A+     E + +F  M+    V  D  
Sbjct: 137 GHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDET 196

Query: 223 SLSSVLGVCAREG--CGVESDVFAQSD------NKFSR----NVHG-----QQVHCLTIK 265
           + ++V+  C+  G  C  ES V    D      N F +    ++H      +  H +  +
Sbjct: 197 TWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQ 256

Query: 266 LG---FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
           LG   + + +   N+++  YA+ GD+ SA+ +F  +P+R  VSWN MIAGY Q  +S KA
Sbjct: 257 LGVYKYRSSVPW-NAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKA 315

Query: 323 IELLQRMKSC--GFEPDEVTSINMLVACVRSGDIKTGRE--------------------- 359
           I+L + M S     +PDEVT +++  AC   G++  G                       
Sbjct: 316 IKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLI 375

Query: 360 --------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                         +F  M +  + S+N ++S +++  +  E+I+L  +M+  G++PDR 
Sbjct: 376 NMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRI 435

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T   IL++C+  G+L+ G+++   S+K    +D+Y    +I +  +  R E A ++   +
Sbjct: 436 TYIAILTACSHAGLLDEGQRLF-ESIKFPD-VDHYAC--MIDMLGRAGRLEEAMKLIQSM 491

Query: 466 P 466
           P
Sbjct: 492 P 492



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 187/412 (45%), Gaps = 75/412 (18%)

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
           K   ++++  L  +   G++ D      +L    + G I+  R++FD MP  +V+ WN M
Sbjct: 40  KSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVM 99

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +S Y +  N +EA  LF  M  + +  +  T   +++  A  G           +LKT  
Sbjct: 100 ISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKG-----------NLKT-- 146

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
                                 A   F ++PE  +V WN+M++G +      E    F  
Sbjct: 147 ----------------------ARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFND 184

Query: 496 M-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI-EKDGYVNDIFVGSALIEMYCKC 553
           M     + P + ++ATV+SSC+ L        +  ++ +K G+  + FV +AL++M+ KC
Sbjct: 185 MLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKC 244

Query: 554 ----------------------------------GDIYGARQFFDMMHGKNTVTWNEMIH 579
                                             GD+  A+  FD M  ++TV+WN MI 
Sbjct: 245 GNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIA 304

Query: 580 GYAQNGYGDEAVRLYKDMIAS--GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
           GY QNG   +A++L+++MI+S    KPD++T V++ +AC H G + +G    + ++++H 
Sbjct: 305 GYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNH- 363

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           ++  +  Y  +I+   R G   +A ++  EM  + D V +  L+S    H +
Sbjct: 364 IQISISVYNSLINMYSRCGSMQDAVLIFQEMATR-DLVSYNTLISGFAEHGH 414



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 15/198 (7%)

Query: 492 FFKQMRQN-EMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
            FK M Q+ ++ P    ++ ++ S    S  F      A + K GY  D +V + ++ +Y
Sbjct: 18  LFKHMLQHCDIKPNASFYSVMMKSAGSESMLFL-----AHVLKSGYDRDHYVRNGILGIY 72

Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
            K G I  AR+ FD M  +    WN MI GY + G  +EA  L+  M    +  + IT+ 
Sbjct: 73  AKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWT 132

Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM-- 668
            ++T  +  G +      F+ M      E  +  +  M+    + G   E   L ++M  
Sbjct: 133 TMITGHAKKGNLKTARMYFDKMP-----ERSVVSWNAMLSGYAQGGAPEETIRLFNDMLS 187

Query: 669 --PCKDDPVIWEVLLSSC 684
               + D   W  ++SSC
Sbjct: 188 PGNVQPDETTWATVISSC 205


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 168/527 (31%), Positives = 284/527 (53%), Gaps = 40/527 (7%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G+++H   I  GF  D+ L  +LL MYAK G +D A+ +F  +  + + +W+ +I+ Y +
Sbjct: 29  GRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIISAYAR 88

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----------------- 358
             +   A+ L +RM + G EP+ VT    L  C     +  GR                 
Sbjct: 89  AGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVL 148

Query: 359 ------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM-QFRG 399
                             ++F+ M + +V S+ AM+S+Y Q+  H EA++LF  M +   
Sbjct: 149 QDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEA 208

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
           ++P+  T A IL +   +G LE G++VH          +  V + L+ +Y KC     A 
Sbjct: 209 IEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEAR 268

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           +VF  +   +++ W SMIA  + +    EA   FK+M   ++ P+  SF++ L++CA L 
Sbjct: 269 KVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLG 325

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           +  +GR++H ++  + ++    + ++L+ MY +CG +  AR+ F+ M  ++  + N MI 
Sbjct: 326 ALDEGREIHHRV-VEAHLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIA 384

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
            + Q+G   +A+R+Y+ M   G+  D ITFV++L ACSH+ LV    + F S+ +DHGV 
Sbjct: 385 AFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVV 444

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P+++HY CM+D LGR+G   +AE L++ MP + D V W  LLS C+ H ++   +RAA +
Sbjct: 445 PLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARK 504

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           +F L P  + PY  L+N+Y++  R+DD R VR+ M E  +    A S
Sbjct: 505 VFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTTPVAVS 551



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 244/524 (46%), Gaps = 63/524 (12%)

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M   G V     + S+  A T L  +E GRR H  +I  G   +I +  ALL +YAKCG 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              A  VFE M   +   +++++S  A+  R   A+ ++R MI + V  + V+ +  LG 
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           CA         V   +D        G+ +H   +      D  L +SLL+MY K  +M  
Sbjct: 121 CA--------SVAGLAD--------GRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVE 164

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACV 349
           A  +F  +  R+V S+  MI+ Y Q  +  +A+EL  RM K    EP+  T   +L A  
Sbjct: 165 ARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVE 224

Query: 350 RSGDIKTG-----------------------------------REMFDSMPSPSVSSWNA 374
             G+++ G                                   R++FDSM + +V SW +
Sbjct: 225 GLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTS 284

Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           M+++Y+Q  N +EA+ LF+ M    V+P   + +  L++CA +G L+ G+++H   ++  
Sbjct: 285 MIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVE-- 339

Query: 435 SHIDN-YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
           +H+ +  + + L+ +Y++C   + A RVF+R+   D    N+MIA  + +    +A   +
Sbjct: 340 AHLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIY 399

Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCK 552
           ++M Q  +     +F +VL +C+  S     R     +  D G V  +     ++++  +
Sbjct: 400 RRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGR 459

Query: 553 CGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNG---YGDEAVR 592
            G +  A +  + M +  + V W  ++ G  ++G    G+ A R
Sbjct: 460 SGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAAR 503



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 188/380 (49%), Gaps = 10/380 (2%)

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS----CGFEPDEVTSINMLVACVRSGD 353
           + ER +V+   ++          +A+E  +R+       GF  D      +L    + G 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 354 IKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
           +   + +F+ M    + +W++++S+Y+++   + A+ L+R M   GV+P+  T A  L  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
           CA++  L  G+ +H   L +    D+ +   L+ +Y KC     A +VF  +   ++  +
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
            +MI+         EA   F +M + E + P  ++FAT+L +   L +  +GR+VH  + 
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240

Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVR 592
             G+  ++ V +AL+ MY KCG    AR+ FD M  +N ++W  MI  YAQ+G   EA+ 
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300

Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
           L+K M    V+P  ++F + L AC+  G +D G EI + +   H   P ++  T ++   
Sbjct: 301 LFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMY 355

Query: 653 GRAGHFHEAEMLIDEMPCKD 672
            R G   +A  + + M  +D
Sbjct: 356 ARCGSLDDARRVFNRMKTRD 375



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 139/581 (23%), Positives = 253/581 (43%), Gaps = 104/581 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH H++  G   D  L   L+++Y+KC +   A+ +F+ M  KD+++W++I+S    
Sbjct: 29  GRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIS---- 84

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                      A  R G  E A+ +Y +M  EG  P  +T A  
Sbjct: 85  ---------------------------AYARAGRGEMAVVLYRRMIAEGVEPNVVTFACA 117

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                ++  +  GR  H  ++   + ++  + ++LL++Y KC     A  VFE M   N 
Sbjct: 118 LGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNV 177

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            ++TAM+S   +     EALE+F  M + +A+  ++ + +++LG  A EG G        
Sbjct: 178 RSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILG--AVEGLG-------- 227

Query: 246 SDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                  N+  G++VH      GF+ ++ + N+L+ MY K G    A  +F ++  R+V+
Sbjct: 228 -------NLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 280

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---- 360
           SW  MIA Y Q     +A+ L +RM     EP  V+  + L AC   G +  GRE+    
Sbjct: 281 SWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRV 337

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         F+ M +    S NAM+++++Q    K+A++
Sbjct: 338 VEAHLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALR 397

Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAASLKTASHIDNYVASGLIG 447
           ++R M+  G+  D  T   +L +C+   ++   +   Q           +++Y+   ++ 
Sbjct: 398 IYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLC--MVD 455

Query: 448 IYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLS----LNSLDIEAFMFFKQMRQNEMY 502
           +  +  R   AE +   +P + D V W ++++G      LN  +  A   F      E+ 
Sbjct: 456 VLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVF------ELA 509

Query: 503 PTQFSFATVLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFV 542
           P +      LS+    +  F   R+V  ++E+ G    + V
Sbjct: 510 PAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTTPVAV 550



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 161/339 (47%), Gaps = 9/339 (2%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+ RG+  D+  +  ++++C  +  LE G+++H   + T    D  + + L+ +Y+KC  
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            + A+RVF  +   D+  W+S+I+  +       A + +++M    + P   +FA  L  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           CA ++    GR +H +I       D  +  +L+ MY KC ++  AR+ F+ M  +N  ++
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180

Query: 575 NEMIHGYAQNGYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
             MI  Y Q G   EA+ L+  M     ++P+  TF  IL A    G ++ G ++   + 
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
              G +  +     ++   G+ G   EA  + D M  + + + W  ++++   H N    
Sbjct: 241 -SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTAR-NVISWTSMIAAYAQHGN---- 294

Query: 694 KRAAEELF-RLDPKNSA-PYSLLANIYSSLGRWDDLRAV 730
            + A  LF R+D + S   +S   N  + LG  D+ R +
Sbjct: 295 PQEALNLFKRMDVEPSGVSFSSALNACALLGALDEGREI 333


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 175/517 (33%), Positives = 268/517 (51%), Gaps = 35/517 (6%)

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
           + G   D +L N +L       D +    +F  + + ++  WN MI G         AIE
Sbjct: 39  RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG--------------------------- 357
               M+S GF P+  T   +L AC R  D++ G                           
Sbjct: 99  FYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYA 158

Query: 358 --------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
                    ++FD +P  +V SW A++S Y      +EAI +FR +    + PD  T+  
Sbjct: 159 KCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVR 218

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           +LS+C  +G L SG+ +H   ++     + +V + L+ +Y+KC   E A  VF  +PE D
Sbjct: 219 VLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKD 278

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
           IV W +MI G +LN L  EA   F QM++  + P  ++   VLS+CA+L +   G  V  
Sbjct: 279 IVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSG 338

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            ++++ ++ +  +G+ALI++Y KCG +  A + F  M  K+ V WN +I G A NGY   
Sbjct: 339 LVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKI 398

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           +  L+  +   G+KPD  TF+ +L  C+H+GLVD G   FNSM     + P ++HY CM+
Sbjct: 399 SFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMV 458

Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
           D LGRAG   EA  LI  MP + + ++W  LL +CR+H + +LA+ A ++L  L+P NS 
Sbjct: 459 DLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSG 518

Query: 710 PYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            Y LL+NIYS+  +WD+   VR  M+E  I K P  S
Sbjct: 519 NYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCS 555



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 254/541 (46%), Gaps = 66/541 (12%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D Y  N IL       D  +   LF ++ + N+  WN +I  LV N   + A+  Y  M 
Sbjct: 45  DNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR 104

Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
           +EGF+P + T   V KA   LLD++ G + H LV+K G D +++V  +L+ LYAKCG+ +
Sbjct: 105 SEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLE 164

Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
            A  VF+++ + N V++TA++SG     +  EA++MFR ++   ++ DS ++  VL  C 
Sbjct: 165 DAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT 224

Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
           + G     D+ +           G+ +H   +++G   ++ +  SL+DMYAK G+M+ A 
Sbjct: 225 QLG-----DLNS-----------GEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKAR 268

Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
            +F  +PE+ +VSW  MI GY       +AI+L  +M+    +PD  T + +L AC R G
Sbjct: 269 SVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLG 328

Query: 353 DIKTGR-----------------------------------EMFDSMPSPSVSSWNAMLS 377
            ++ G                                    E+F  M       WNA++S
Sbjct: 329 ALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIIS 388

Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
             + +   K +  LF +++  G+KPD  T   +L  C   G+++ G++   +  +  S  
Sbjct: 389 GLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLT 448

Query: 438 DNYVASG-LIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
            +    G ++ +  +    + A ++   +P E + + W +++    ++     A +  KQ
Sbjct: 449 PSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQ 508

Query: 496 MRQNEMYPTQ--------FSFATVLSSCAKLSSSFQGRQVH-----AQIEKDGYVNDIFV 542
           + + E + +         +S        AK+  S   +++      + IE DG V++  V
Sbjct: 509 LIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLV 568

Query: 543 G 543
           G
Sbjct: 569 G 569



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 211/467 (45%), Gaps = 69/467 (14%)

Query: 159 NALLSLYAKCGW----TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
           N LL++  +C +    T +   +F ++ +PN   +  M+ GL   D   +A+E + LM  
Sbjct: 46  NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105

Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHL 274
           +    ++ +   VL  CAR             D +      G ++H L +K GF+ D+ +
Sbjct: 106 EGFLPNNFTFPFVLKACAR-----------LLDLQL-----GVKIHTLVVKGGFDCDVFV 149

Query: 275 SNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGF 334
             SL+ +YAK G ++ A  +F ++P+++VVSW  +I+GY    +  +AI++ +R+     
Sbjct: 150 KTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNL 209

Query: 335 EPDEVTSINMLVACVRSGDIKTG-----------------------------------RE 359
            PD  T + +L AC + GD+ +G                                   R 
Sbjct: 210 APDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARS 269

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +FD MP   + SW AM+  Y+ +   KEAI LF +MQ   VKPD  T+  +LS+CA +G 
Sbjct: 270 VFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGA 329

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
           LE G+ V     +     +  + + LI +Y+KC     A  VF  + E D V WN++I+G
Sbjct: 330 LELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISG 389

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
           L++N     +F  F Q+ +  + P   +F  +L  C       +GR+    + +      
Sbjct: 390 LAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYR------ 443

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHG--------KNTVTWNEMI 578
            F  +  IE Y    D+ G     D  H          N + W  ++
Sbjct: 444 FFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 490



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 178/394 (45%), Gaps = 52/394 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H  +++ G   D F+   L+ LY+KC     A  +FD +P K++ SW AI      
Sbjct: 131 GVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAI------ 184

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    IS  +  G   +A+ ++ ++      P   T+  V
Sbjct: 185 -------------------------ISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRV 219

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A T L D+  G   H  ++++G+ +N++V  +L+ +YAKCG  + A  VF+ M E + 
Sbjct: 220 LSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDI 279

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ AM+ G A      EA+++F  M R+ V  D  ++  VL  CAR G  +E       
Sbjct: 280 VSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLG-ALEL------ 332

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G+ V  L  +  F  +  L  +L+D+YAK G M  A  +F  + E+  V W
Sbjct: 333 ---------GEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVW 383

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM-- 364
           N +I+G         +  L  +++  G +PD  T I +L  C  +G +  GR  F+SM  
Sbjct: 384 NAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYR 443

Query: 365 ---PSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
               +PS+  +  M+    ++    EA +L R M
Sbjct: 444 FFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNM 477



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 136/321 (42%), Gaps = 48/321 (14%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +G+ +H  I+  G+  + F+   L+++Y+KC N                           
Sbjct: 231 SGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGN--------------------------- 263

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
               +E A  +FD MPE+++VSW  +I     NGL ++A+ ++ +M  E   P   T+  
Sbjct: 264 ----MEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVG 319

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   L  +E G    GLV +     N  +  AL+ LYAKCG    A  VF+ M E +
Sbjct: 320 VLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKD 379

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            V + A++SGLA    V  +  +F  + +  +  D  +   +L  C   G   E   +  
Sbjct: 380 RVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFN 439

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVV 304
           S  +F                     +     ++D+  + G +D A  +  N+P E + +
Sbjct: 440 SMYRF---------------FSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAI 484

Query: 305 SWNVMIAGYGQKYQSTKAIEL 325
            W  ++ G  + ++ T+  EL
Sbjct: 485 VWGALL-GACRIHRDTQLAEL 504


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 170/445 (38%), Positives = 262/445 (58%), Gaps = 11/445 (2%)

Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVS 370
           GYG     T A  L+     CG   D+  + N L+A   + G +   + +F+S     + 
Sbjct: 122 GYGSS-SVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMV 180

Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
           SWN M+SS+SQS+   EA+  FR M   GV+ D  T+A +L +C+ +  L+ GK++HA  
Sbjct: 181 SWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYV 240

Query: 431 LKTASHIDN-YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEA 489
           L+    I+N +V S L+ +Y  C++ E   RVF  I    I  WN+MI+G + N LD +A
Sbjct: 241 LRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKA 300

Query: 490 FMFFKQM-RQNEMYPTQFSFATVLSSCA-KLSSSFQGRQVHAQIEKDGYVNDIFVGSALI 547
            + F +M +   + P   + A+V+ +C   L++  +G+++HA   ++   +DI VGSAL+
Sbjct: 301 LILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALV 360

Query: 548 EMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-----V 602
           +MY KCG +  +R+ F+ M  KN +TWN +I     +G G+EA+ L+K+M+A        
Sbjct: 361 DMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEA 420

Query: 603 KPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAE 662
           KP+++TF+ +  ACSHSGL+  G+ +F  M+ DHGVEP  DHY C++D LGRAG   EA 
Sbjct: 421 KPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAY 480

Query: 663 MLIDEMPCKDDPV-IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
            L++ MP + D V  W  LL +CR+H NV L + AA+ L  L+P  ++ Y LL+NIYSS 
Sbjct: 481 ELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSA 540

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           G W+    VR+ M +  + K+P  S
Sbjct: 541 GLWNKAMEVRKNMRQMGVKKEPGCS 565



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 112/472 (23%), Positives = 206/472 (43%), Gaps = 95/472 (20%)

Query: 81  PERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGR 140
           P R+  SW + + +  R+    +A+S Y +M+  G  P +    +V KA + L D++ G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 141 RCHGLVIKIG---------------------LDKNIYVANALLSLYAKCGWTKHAVPVFE 179
           + H   +K G                     +    +  NAL+++YAK G    +  +FE
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA---REGC 236
              + + V++  M+S  +++DR  EAL  FRLM+ + V +D V+++SVL  C+   R   
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232

Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
           G E   +   +N    N                    + ++L+DMY     ++S   +F 
Sbjct: 233 GKEIHAYVLRNNDLIENS------------------FVGSALVDMYCNCRQVESGRRVFD 274

Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIEL-LQRMKSCGFEPDEVTSINMLVACVRS---- 351
           ++  R +  WN MI+GY +     KA+ L ++ +K  G  P+  T  +++ ACV S    
Sbjct: 275 HILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAI 334

Query: 352 ----------------GDIKTG----------------REMFDSMPSPSVSSWNAMLSSY 379
                            DI  G                R +F+ MP+ +V +WN ++ + 
Sbjct: 335 AKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMAC 394

Query: 380 SQSENHKEAIKLFREM---QFRG--VKPDRTTLAIILSSCAAMGILESG-----KQVHAA 429
                 +EA++LF+ M     RG   KP+  T   + ++C+  G++  G     +  H  
Sbjct: 395 GMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDH 454

Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIV-CWNSMIAG 479
            ++  S  D+Y    ++ +  +  + E A  + + +P E D V  W+S++  
Sbjct: 455 GVEPTS--DHYAC--VVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGA 502



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 184/366 (50%), Gaps = 34/366 (9%)

Query: 7   GKLLHAHILRNGLFDDTF-LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           G+ +HA  ++ G    +  + N L+ +Y KC        + DK      ++ NA+++   
Sbjct: 111 GEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGG------IGDK-----TFTNNALMAMYA 159

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           K   ++ +  LF+   +R++VSWN +IS+  ++    +AL+ +  M  EG     +T+AS
Sbjct: 160 KLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIAS 219

Query: 126 VFKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           V  A + L  ++ G+  H  V++   L +N +V +AL+ +Y  C   +    VF+ +   
Sbjct: 220 VLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR 279

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI-DSVSLSSVLGVCAREGCGVESDVF 243
               + AM+SG A+     +AL +F  MI+ A  + ++ +++SV+  C      +     
Sbjct: 280 RIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAI----- 334

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G+++H   I+    +D+ + ++L+DMYAK G ++ +  +F+ +P ++V
Sbjct: 335 ----------AKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNV 384

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRM-----KSCGFEPDEVTSINMLVACVRSGDIKTGR 358
           ++WNV+I   G   +  +A+EL + M     +    +P+EVT I +  AC  SG I  G 
Sbjct: 385 ITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGL 444

Query: 359 EMFDSM 364
            +F  M
Sbjct: 445 NLFYRM 450



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 69/123 (56%), Gaps = 10/123 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA+ +RN L  D  + + L+++Y+KC   + ++ +F++MP+K++ +WN ++ A   
Sbjct: 337 GKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGM 396

Query: 67  SDDLEFAYKLFDEM---------PERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GF 116
               E A +LF  M          + N V++  + +A   +GL  + L+++ +M ++ G 
Sbjct: 397 HGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGV 456

Query: 117 VPT 119
            PT
Sbjct: 457 EPT 459


>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
 gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
          Length = 1033

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 191/625 (30%), Positives = 311/625 (49%), Gaps = 54/625 (8%)

Query: 159 NALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAV 217
           N+ L    K G    A  +F +MS  +E+++T +++G        EAL +F  M +   +
Sbjct: 88  NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSN 276
             D   +S  L  CA                    NV+ G+ +H  ++K G    + +S+
Sbjct: 148 QKDQFVVSVALKACA-----------------LGMNVYFGELLHGFSVKSGLINSVFVSS 190

Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
           +L+DMY K G  +    +F N+  R+VVSW  +I G      S   +     M       
Sbjct: 191 ALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGY 250

Query: 337 DEVTSINMLVACVRSGDIKTGR-----------------------------------EMF 361
           D  T    L A   SG +  G+                                    +F
Sbjct: 251 DSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLF 310

Query: 362 DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
             M +P V SW  ++ +Y Q  + + A+  F+ M+   V P+  T A ++S+CA + I +
Sbjct: 311 GKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITK 370

Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
            G+Q+H  +L+        V++ +I +YSKC   + A  VF  +   DI+ W+++I+   
Sbjct: 371 WGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYC 430

Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
             S   EAF +   M +    P +F+ A+VLS C  ++    G+QVHA     G  ++  
Sbjct: 431 QGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETM 490

Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
           V SALI MY + G++  A + FD +   + V+W  MI+GYA++GY  EA+ L++++ + G
Sbjct: 491 VHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVG 550

Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEA 661
           + PD +TF+ ILTAC+H+GLVD+G   +  M  ++ + P  +HY C+ID L RAG   EA
Sbjct: 551 LMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEA 610

Query: 662 EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSL 721
           E ++  MP   D V+W  LL +CR H ++  A  AAE++ RL P ++  +  LANIYS+ 
Sbjct: 611 EHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSAS 670

Query: 722 GRWDDLRAVRELMSENCIVKDPAYS 746
           GR ++   VR+LM    ++K+P +S
Sbjct: 671 GRREEAAHVRKLMKSKGVIKEPGWS 695



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 249/576 (43%), Gaps = 78/576 (13%)

Query: 73  AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKAST 131
           A  +F++M  R+ +SW NLI+  V      +AL +++ M  + G       ++   KA  
Sbjct: 103 ARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACA 162

Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
             ++V  G   HG  +K GL  +++V++AL+ +Y K G T+    VFE M+  N V++TA
Sbjct: 163 LGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTA 222

Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
           ++ GL      ++ L  F  M R  V  DS + +  L   A  G                
Sbjct: 223 VIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL--------------- 267

Query: 252 RNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
             +H G+ +H  TIK GF    ++ N+L  MY+K    D    +F  +    VVSW  +I
Sbjct: 268 --LHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLI 325

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------- 360
             Y Q     +A++  +RM+     P+E T  +++ AC      K G ++          
Sbjct: 326 MTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLV 385

Query: 361 -------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
                                    FD M    + SW+ ++S Y Q  + KEA      M
Sbjct: 386 DALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWM 445

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
              G KP+   LA +LS C +M +LE GKQVHA +L      +  V S LI +YS+    
Sbjct: 446 SREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNL 505

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
           + A ++F  I   DIV W +MI G + +    EA   F+ +    + P   +F  +L++C
Sbjct: 506 QEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTAC 565

Query: 516 AKLSSSFQGRQVHAQIEKDGY------VNDIFVGSA------LIEMYCKCGDIYGARQFF 563
                       HA +   G+       N+  +  +      +I++ C+ G +  A    
Sbjct: 566 N-----------HAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMV 614

Query: 564 -DMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
            +M    + V W+ ++     +G  D A+   + M+
Sbjct: 615 RNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQML 650



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 206/461 (44%), Gaps = 58/461 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +HA  ++ G  +  ++ N L  +YSKC                              
Sbjct: 271 GKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKP--------------------------- 303

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               ++  +LF +M   +VVSW NLI   V+ G EE+AL  + +M      P   T ASV
Sbjct: 304 ----DYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASV 359

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A   L   + G + HG  +++GL   + V+N++++LY+KCG  + A  VF+ M+  + 
Sbjct: 360 ISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDI 419

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           ++++ ++S   +     EA      M R+    +  +L+SVL VC               
Sbjct: 420 ISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCG-------------- 465

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+QVH   + +G + +  + ++L+ MY+++G++  A  IF ++    +VSW
Sbjct: 466 --SMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSW 523

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
             MI GY +   S +AI L + + S G  PD VT I +L AC  +G +  G   +  M  
Sbjct: 524 TAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTN 583

Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
               +PS   +  ++    ++    EA  + R M F     D    + +L +C   G L+
Sbjct: 584 EYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPF---PCDDVVWSTLLRACRDHGDLD 640

Query: 422 SGKQVHAASLKTASHIDNYVAS-GLIGIYSKCQRNELAERV 461
             + + AA      H ++  A   L  IYS   R E A  V
Sbjct: 641 --RAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHV 679



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/510 (23%), Positives = 222/510 (43%), Gaps = 88/510 (17%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+LLH   +++GL +  F+ + L+++Y K   T     +F+ M  +++ SW A+      
Sbjct: 170 GELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAV------ 223

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                                    I  LV  G     LS +++M          T A  
Sbjct: 224 -------------------------IVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVA 258

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KAS     + +G+  H   IK G ++  YV N L ++Y+KC    + + +F +MS P+ 
Sbjct: 259 LKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDV 318

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++T ++    +      AL+ F+ M +  VS +  + +SV+  CA              
Sbjct: 319 VSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACA-------------- 364

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               +    G+Q+H   ++LG    L +SNS++ +Y+K G +  A ++F  +  + ++SW
Sbjct: 365 --NLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISW 422

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           + +I+ Y Q   + +A   L  M   G +P+E    ++L  C                  
Sbjct: 423 STIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALC 482

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             RSG+++   ++FDS+ +  + SW AM++ Y++    +EAI L
Sbjct: 483 IGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISL 542

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESG---KQVHAASLKTASHIDNYVASGLIGI 448
           F  +   G+ PD  T   IL++C   G+++ G    ++     + A   ++Y    +I +
Sbjct: 543 FENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHY--GCIIDL 600

Query: 449 YSKCQRNELAERVFHRIP-ELDIVCWNSMI 477
             +  R   AE +   +P   D V W++++
Sbjct: 601 LCRAGRLSEAEHMVRNMPFPCDDVVWSTLL 630



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 169/357 (47%), Gaps = 3/357 (0%)

Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
           QR  +  + P+     + L   ++ G I   R+MF+ M      SW  +++ Y  + N  
Sbjct: 73  QRAPTAYYVPNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSN 132

Query: 387 EAIKLFREMQF-RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           EA+ LF  M    G++ D+  +++ L +CA    +  G+ +H  S+K+      +V+S L
Sbjct: 133 EALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSAL 192

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y K  + E    VF  +   ++V W ++I GL      ++   +F +M ++++    
Sbjct: 193 VDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDS 252

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +FA  L + A+      G+ +HAQ  K G+    +V + L  MY KC       + F  
Sbjct: 253 HTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGK 312

Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
           M   + V+W  +I  Y Q G  + A+  +K M  S V P++ TF ++++AC++  +   G
Sbjct: 313 MSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWG 372

Query: 626 VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
            +I +   L  G+   L     +I    + G   EA ++ D M  + D + W  ++S
Sbjct: 373 EQI-HGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGM-TRKDIISWSTIIS 427


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 198/633 (31%), Positives = 309/633 (48%), Gaps = 84/633 (13%)

Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEM--SEPNEVTFTAMMSGLAKTDRVVEALEMF 209
           D     A +L++ +A  G  + A   F+ +  +  + V   AMMS  A+      A+ +F
Sbjct: 91  DPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVF 150

Query: 210 R-LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
             L+   ++  D  S ++++        G   ++ A          H  Q+HC  +K G 
Sbjct: 151 HALLGSGSLRPDDYSFTALI-----SAVGQMHNLAAP---------HCTQLHCSVLKSGA 196

Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
            A L +SN+L+ +Y K            + PE    SW+              A ++L  
Sbjct: 197 AAVLSVSNALIALYMK-----------CDTPE---ASWD--------------ARKVLDE 228

Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
           M     + D++T   M+V  VR GD+   R +F+ +       WNAM+S Y QS    +A
Sbjct: 229 MP----DKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADA 284

Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA----SG 444
            +LFR M    V  D  T   +LS+CA  G    GK VH   ++   +     A    + 
Sbjct: 285 FELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNA 344

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNS----------------------------- 475
           L+ +YSK  +  +A+R+F  +   D+V WN+                             
Sbjct: 345 LVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSW 404

Query: 476 --MIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
             M++G     L  +A   F QMR  ++ P  +++A  +++C +L +   GRQ+HA + +
Sbjct: 405 MVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQ 464

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G+      G+AL+ MY KCG +  AR  F +M   ++V+WN MI    Q+G+G EA+ L
Sbjct: 465 CGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALEL 524

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +  M+A G+ PD I+F+ ILTAC+H+GLVD G   F SM+ D G+ P  DHY  +ID LG
Sbjct: 525 FDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLG 584

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           R+G   EA  LI  MP +  P IWE +LS CR + ++     AA++LFR+ P++   Y L
Sbjct: 585 RSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYIL 644

Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L+N YS+ GRW D   VR+LM +  + K+P  S
Sbjct: 645 LSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCS 677



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 167/624 (26%), Positives = 273/624 (43%), Gaps = 95/624 (15%)

Query: 8   KLLHAHILRNGLF---DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           + LHA +L   L        L  RLI LY+   +  +   LF   P     +  ++++A 
Sbjct: 45  RCLHARLLTADLLHAPSHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAH 104

Query: 65  CKSDDLEFAYKLFDEMP--ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHI 121
             +  L  A   FD +P   R+ V  N ++SA  R  L   A+SV++ +   G + P   
Sbjct: 105 AAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDY 164

Query: 122 TLASVFKASTAL--LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC----------- 168
           +  ++  A   +  L   H  + H  V+K G    + V+NAL++LY KC           
Sbjct: 165 SFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARK 224

Query: 169 -----------GWTKHAV------------PVFEEMSEPNEVTFTAMMSGLAKTDRVVEA 205
                       WT   V             VFEE+    +V + AM+SG  ++    +A
Sbjct: 225 VLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADA 284

Query: 206 LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
            E+FR M+ + V +D  + +SVL  CA  G  V             ++VHGQ +  L   
Sbjct: 285 FELFRRMVSEKVPLDEFTFTSVLSACANAGFFVH-----------GKSVHGQIIR-LQPN 332

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
              EA L ++N+L+ +Y+K G +  A+ IF  +  + VVSWN +++GY            
Sbjct: 333 FVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGY------------ 380

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                  + SG +    E+F  MP  +  SW  M+S Y      
Sbjct: 381 -----------------------IDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLS 417

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           ++A+KLF +M+   VKP   T A  +++C  +G L+ G+Q+HA  ++      N   + L
Sbjct: 418 EDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNAL 477

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y+KC     A  VF  +P LD V WN+MI+ L  +    EA   F QM    + P +
Sbjct: 478 LTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDR 537

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN---DIFVGSALIEMYCKCGDIYGARQF 562
            SF T+L++C       +G      +++D  ++   D +  + LI++  + G I  AR  
Sbjct: 538 ISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY--ARLIDLLGRSGRIGEARDL 595

Query: 563 FDMMHGKNTVT-WNEMIHGYAQNG 585
              M  + T + W  ++ G   NG
Sbjct: 596 IKTMPFEPTPSIWEAILSGCRTNG 619



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 211/441 (47%), Gaps = 30/441 (6%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHS---AQHLFDKMPHKDIYSWNAILSAQCK 66
           LH  +L++G      + N LI LY KC+   +   A+ + D+MP KD  +W  ++    +
Sbjct: 187 LHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVR 246

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             D+  A  +F+E+  +  V WN +IS  V++G+   A  ++ +M +E       T  SV
Sbjct: 247 RGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSV 306

Query: 127 FKASTALLDVEHGRRCHGLVIKIG----LDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
             A        HG+  HG +I++      +  + V NAL++LY+K G    A  +F+ M+
Sbjct: 307 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 366

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLM---------------IRKAVSIDSVSLSSV 227
             + V++  ++SG   +  + +A+E+F++M               +   +S D++ L + 
Sbjct: 367 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ 426

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           +     + C         +  +     HG+Q+H   ++ GFEA     N+LL MYAK G 
Sbjct: 427 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 486

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           ++ A ++F  +P    VSWN MI+  GQ     +A+EL  +M + G +PD ++ + +L A
Sbjct: 487 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA 546

Query: 348 CVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
           C  +G +  G   F+SM      SP    +  ++    +S    EA  L + M F   +P
Sbjct: 547 CNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPF---EP 603

Query: 403 DRTTLAIILSSCAAMGILESG 423
             +    ILS C   G +E G
Sbjct: 604 TPSIWEAILSGCRTNGDMEFG 624



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 154/321 (47%), Gaps = 25/321 (7%)

Query: 5   VAGKLLHAHILR---NGLFDDTF-LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           V GK +H  I+R   N + +    + N L+ LYSK      A+ +FD M  KD+ SWN I
Sbjct: 317 VHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTI 376

Query: 61  LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
           LS    S  L+ A ++F  MP +N +SW  ++S  V  GL E AL ++N+M  E   P  
Sbjct: 377 LSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCD 436

Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
            T A    A   L  ++HGR+ H  +++ G + +    NALL++YAKCG    A  VF  
Sbjct: 437 YTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLV 496

Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
           M   + V++ AM+S L +     EALE+F  M+ + +  D +S  ++L  C   G   E 
Sbjct: 497 MPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEG 556

Query: 241 -----------------DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
                            D +A+  +   R+    +   L   + FE    +  ++L    
Sbjct: 557 FHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCR 616

Query: 284 KNGDMD----SAEVIFSNLPE 300
            NGDM+    +A+ +F  +P+
Sbjct: 617 TNGDMEFGAYAADQLFRMIPQ 637


>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Cucumis sativus]
          Length = 781

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 189/567 (33%), Positives = 300/567 (52%), Gaps = 81/567 (14%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKN--GDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
           +Q+     ++G E D    N L+   A +  G++  AE IF+ + + S+  +NVM+  Y 
Sbjct: 160 KQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYA 219

Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINML--VAC---VRSGD------IKTG------ 357
           ++    K + L Q+++  G  PD  T   +L  + C   VR G+      +KTG      
Sbjct: 220 KRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNY 279

Query: 358 ------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
                             +++FD M +    SWN M+S Y +    ++AI  FREMQ  G
Sbjct: 280 VYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEG 339

Query: 400 -VKPDRTTLAIILSSCAAMGILESGKQVH---AASLKTASHIDNYVASGLIGIYSKCQRN 455
             KPD  T+   LS+C A+  LE G ++H      L   + IDN     L+ +Y+KC   
Sbjct: 340 NEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDN----ALLDMYAKCGCL 395

Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDI---------------------------- 487
            +A  +F  +   +++CW SMI+G  +N  D+                            
Sbjct: 396 NIARNIFDEMSMKNVICWTSMISGY-INCGDLREARDLFDKSPVRDVVLWTAMINGYVQF 454

Query: 488 ----EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
               +A   F++M+   + P +F+  T+L+ CA+L +  QG+ +H  ++++    D+ VG
Sbjct: 455 HHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVG 514

Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
           +ALIEMY KCG +  + + F  +  K+T +W  +I G A NG   EA+RL+ +M   G K
Sbjct: 515 TALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAK 574

Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
           PDDITF+ +L+ACSH GLV+ G   FNSM+  H +EP ++HY C+ID LGRAG   EAE 
Sbjct: 575 PDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEE 634

Query: 664 LIDEMPCKDDPVI---WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
           LI E+P ++  ++   +  LLS+CR+H NV + +R A++L  ++  +S+ ++LLANIY+S
Sbjct: 635 LIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYAS 694

Query: 721 LGRWDDLRAVRELMSENCIVKDPAYSL 747
           + RW+D + VR  M E  + K P  SL
Sbjct: 695 VDRWEDAKKVRRKMKELGVKKMPGCSL 721



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 217/471 (46%), Gaps = 59/471 (12%)

Query: 53  DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
           D Y +N+++    +  ++E A KLFDEM  R+ VSWN +IS  VR    E A++ + +M 
Sbjct: 277 DNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQ 336

Query: 113 NEGF-VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
            EG   P   T+ S   A TAL ++E G   H  V K  L     + NALL +YAKCG  
Sbjct: 337 QEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-ELGFTTRIDNALLDMYAKCGCL 395

Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEA-------------------------- 205
             A  +F+EMS  N + +T+M+SG      + EA                          
Sbjct: 396 NIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFH 455

Query: 206 -----LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
                + +FR M  + V  D  ++ ++L  CA+ G  +E                G+ +H
Sbjct: 456 HFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLG-ALE---------------QGKWIH 499

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
               +     D+ +  +L++MY+K G +D +  IF  L ++   SW  +I G     +++
Sbjct: 500 GYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTS 559

Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAM 375
           +A+ L   M+  G +PD++T I +L AC   G ++ GR  F+SM       P V  +  +
Sbjct: 560 EALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCV 619

Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
           +    ++    EA +L +E+     +        +LS+C     ++ G+++ A  L+   
Sbjct: 620 IDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERL-AKKLENIE 678

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLD 486
             D+ + + L  IY+   R E A++V  ++ EL +      + G SL  +D
Sbjct: 679 SCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGV----KKMPGCSLIEVD 725



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 200/450 (44%), Gaps = 53/450 (11%)

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
           +L +A K+F+ + + ++  +N ++    + G+  K L ++ ++  +G  P   T   V K
Sbjct: 192 NLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLK 251

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
           A   L DV  G +  G ++K G+D + YV N+L+ +Y +    ++A  +F+EM+  + V+
Sbjct: 252 AIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVS 311

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCA---REGCGVESDVFA 244
           +  M+SG  +  R  +A+  FR M ++     D  ++ S L  C        G E   + 
Sbjct: 312 WNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV 371

Query: 245 QSDNKFSRNVHG------QQVHCLTIKLGFEADLHLSN-----SLLDMYAKNGDMDSAEV 293
           + +  F+  +         +  CL I      ++ + N     S++  Y   GD+  A  
Sbjct: 372 RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARD 431

Query: 294 IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGD 353
           +F   P R VV W  MI GY Q +    A+ L + M+    +PD+ T + +L  C + G 
Sbjct: 432 LFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGA 491

Query: 354 IKTGR-----------------------------------EMFDSMPSPSVSSWNAMLSS 378
           ++ G+                                   E+F  +     +SW +++  
Sbjct: 492 LEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICG 551

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
            + +    EA++LF EM+  G KPD  T   +LS+C+  G++E G++    S+K    I+
Sbjct: 552 LAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFF-NSMKKVHRIE 610

Query: 439 NYVA--SGLIGIYSKCQRNELAERVFHRIP 466
             V     +I +  +    + AE +   IP
Sbjct: 611 PKVEHYGCVIDLLGRAGLLDEAEELIQEIP 640



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 231/505 (45%), Gaps = 81/505 (16%)

Query: 318 QSTKAIELLQRMKS----CGFEPDEVTSINMLVACVRS--GDIKTGREMFDSMPSPSVSS 371
           ++ K+++ L++++S     G E D  T   ++  C  S  G+++   ++F+ +  PS+  
Sbjct: 151 RNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFV 210

Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
           +N M+  Y++    ++ + LF++++  G+ PD  T   +L +   +  +  G++V    +
Sbjct: 211 YNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV 270

Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM 491
           KT   +DNYV + LI +Y +    E A+++F  +   D V WN MI+G        +A  
Sbjct: 271 KTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAIN 330

Query: 492 FFKQMRQ--NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIE 548
            F++M+Q  NE  P + +  + LS+C  L +   G ++H  + K+ G+   I   +AL++
Sbjct: 331 TFREMQQEGNEK-PDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRI--DNALLD 387

Query: 549 MYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ------------------------- 583
           MY KCG +  AR  FD M  KN + W  MI GY                           
Sbjct: 388 MYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAM 447

Query: 584 -NGY-----GDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG------------ 625
            NGY      D+AV L+++M    VKPD  T V +LT C+  G ++ G            
Sbjct: 448 INGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRI 507

Query: 626 ----------VEIFNSMQ-LDHGVEPILD-------HYTCMIDCLGRAGHFHEAEMLIDE 667
                     +E+++    +D  +E   +        +T +I  L   G   EA  L  E
Sbjct: 508 TMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSE 567

Query: 668 MP---CKDDPVIWEVLLSSCRLHANVRLAKR---AAEELFRLDPKNSAPYSLLANIYSSL 721
           M     K D + +  +LS+C     V   +R   + +++ R++PK    Y  + ++    
Sbjct: 568 MERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPK-VEHYGCVIDLLGRA 626

Query: 722 GRWDDLRA-VRELMSENCIVKDPAY 745
           G  D+    ++E+  ENC +  P Y
Sbjct: 627 GLLDEAEELIQEIPIENCEIVVPLY 651



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 142/293 (48%), Gaps = 16/293 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H ++ R  L   T + N L+++Y+KC   + A+++FD+M  K++  W +++S    
Sbjct: 364 GDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYIN 422

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             DL  A  LFD+ P R+VV W  +I+  V+    + A++++ +M  +   P   T+ ++
Sbjct: 423 CGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTL 482

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
                 L  +E G+  HG + +  +  ++ V  AL+ +Y+KCG    ++ +F E+ + + 
Sbjct: 483 LTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDT 542

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
            ++T+++ GLA   +  EAL +F  M R     D ++   VL  C+  G   E   F  S
Sbjct: 543 ASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNS 602

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
             K  R                E  +     ++D+  + G +D AE +   +P
Sbjct: 603 MKKVHR---------------IEPKVEHYGCVIDLLGRAGLLDEAEELIQEIP 640



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 193/412 (46%), Gaps = 37/412 (8%)

Query: 343 NMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF----- 397
           N L A   S D   G  ++  M   +   W      +SQS +H   + + R +QF     
Sbjct: 72  NALRAATGSADFSAG--LYTKM---NRDIWIFQFFKHSQS-SHMLPLSIIRRVQFISRHF 125

Query: 398 -----------RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
                      R  K  + +    L +C +M  L   KQ+ +   +     D    + L+
Sbjct: 126 SSSPHLVPVLLRISKLTKKSCIECLRNCKSMDQL---KQIQSQIFRIGLEGDRDTINKLM 182

Query: 447 GIYSKCQRNEL--AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
              +      L  AE++F+ + +  +  +N M+   +   +  +  + F+Q+R++ ++P 
Sbjct: 183 AFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPD 242

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            F++  VL +   L    QG +V   I K G   D +V ++LI+MY +  ++  A++ FD
Sbjct: 243 GFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFD 302

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VKPDDITFVAILTACSHSGLVD 623
            M  +++V+WN MI GY +    ++A+  +++M   G  KPD+ T V+ L+AC+    ++
Sbjct: 303 EMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLE 362

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
           +G EI N ++ + G    +D+   ++D   + G  + A  + DEM  K + + W  ++S 
Sbjct: 363 LGDEIHNYVRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISG 419

Query: 684 CRLHANVRLAKRAAEELFRLDP-KNSAPYSLLANIYSSLGRWDDLRAV-REL 733
                ++R A+    +LF   P ++   ++ + N Y     +DD  A+ RE+
Sbjct: 420 YINCGDLREAR----DLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREM 467


>gi|218197545|gb|EEC79972.1| hypothetical protein OsI_21597 [Oryza sativa Indica Group]
          Length = 731

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 208/707 (29%), Positives = 354/707 (50%), Gaps = 34/707 (4%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N +++   ++  LE A ++FD MP R+VVSWN +++   R G   +A+  + +M  +GF 
Sbjct: 39  NRLMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGFR 98

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P H + ++   A   L  +E G  C   V+      N+ + NAL+S          A   
Sbjct: 99  PDHTSFSTALSACARLEALEMG-SCLEQVLDGVESPNVALWNALISGLVMNHRVGDARKA 157

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSI--------------DSV 222
           F+ M   N V++TAM+ G      V  A ++F+LM ++ +VS               ++V
Sbjct: 158 FDRMPVRNVVSWTAMIKGHFTVHEVDMAFQLFKLMPVKNSVSWCVMIGGFVTHEKFSEAV 217

Query: 223 SLSSVLGVCAREGCGVESDVFAQSDNKFS--RNVHGQQ-VHCLTIKLGFEADLHLSNSLL 279
            L + L +   E   V + +  +  N F+  +++ G + +H L +K GF  DL L  SL+
Sbjct: 218 ELFNSLMMNGEE---VTNVILVKIVNAFAGMKSIRGGRCIHGLAVKSGFAYDLVLEASLV 274

Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
            MY K+ D+  A + F  +    V SWN M+ GY    +  +A +L   M +     D++
Sbjct: 275 LMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSDKIDEARKLFDSMNN----RDKI 330

Query: 340 TSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
           +  +M+   +  G I    E++  M   S+ +  A++S +  +    +A    R+M +  
Sbjct: 331 SWNSMINGYINDGRIADATELYSKMTEKSLEAATALMSWFIDNGMLDKA----RDMFYNM 386

Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
            + D  +   +L      G ++    +     K      N + SGL   + + +  E A 
Sbjct: 387 PQIDVMSCTTLLFGYVKGGHMDDALDLFHMMQKRTVVTYNVMISGL---FHQGKITE-AY 442

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           ++F+  P  D V W+ ++AGL+ N L  EA  F+K+M  + + P++   ++++S  +  S
Sbjct: 443 KLFNESPTRDSVTWSCLVAGLATNGLIHEALQFYKKMLLSNIRPSESVVSSLISCLSNYS 502

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
               G+Q HA   K G  + + + ++LI +YCKCG++  A+  FD+M  ++ VTWN +IH
Sbjct: 503 MMVHGQQFHATTIKIGLDSHLLIQNSLISLYCKCGEMIIAQSIFDLMAKRDKVTWNTIIH 562

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           GYA N  G  AV +++ M  + V PDDITF+ +L+AC+H  L++     FN+M   +G+ 
Sbjct: 563 GYALNNLGQNAVEMFESMTKAQVDPDDITFLGVLSACNHMSLLEEAKYFFNAMTCTYGIL 622

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P + HY CM+D   R     EAE L+  MP + D  IW  LLS CRL  N +LA+ AA +
Sbjct: 623 PNIMHYACMVDLFCRKCMIKEAEGLVKSMPFEPDSAIWTSLLSGCRLTGNDKLAEHAASQ 682

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L  +DP    PY  L +++    +   + ++R  +      KD  YS
Sbjct: 683 LIAIDPCTKMPYLHLISVHGLTNKSTVIDSLRSQIKSTATEKDVGYS 729



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/563 (22%), Positives = 261/563 (46%), Gaps = 30/563 (5%)

Query: 25  LCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERN 84
           L N LI      +    A+  FD+MP +++ SW A++       +++ A++LF  MP +N
Sbjct: 137 LWNALISGLVMNHRVGDARKAFDRMPVRNVVSWTAMIKGHFTVHEVDMAFQLFKLMPVKN 196

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
            VSW  +I   V +    +A+ ++N +   G   T++ L  +  A   +  +  GR  HG
Sbjct: 197 SVSWCVMIGGFVTHEKFSEAVELFNSLMMNGEEVTNVILVKIVNAFAGMKSIRGGRCIHG 256

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
           L +K G   ++ +  +L+ +Y K      A   F++M   +  ++ AM+ G   +D++ E
Sbjct: 257 LAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSDKIDE 316

Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
           A ++F  M  +    D +S +S++     +G        A +   +S+            
Sbjct: 317 ARKLFDSMNNR----DKISWNSMINGYINDG------RIADATELYSKMT---------- 356

Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
               E  L  + +L+  +  NG +D A  +F N+P+  V+S   ++ GY +      A++
Sbjct: 357 ----EKSLEAATALMSWFIDNGMLDKARDMFYNMPQIDVMSCTTLLFGYVKGGHMDDALD 412

Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
           L   M+    +   VT   M+      G I    ++F+  P+    +W+ +++  + +  
Sbjct: 413 LFHMMQ----KRTVVTYNVMISGLFHQGKITEAYKLFNESPTRDSVTWSCLVAGLATNGL 468

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
             EA++ +++M    ++P  + ++ ++S  +   ++  G+Q HA ++K        + + 
Sbjct: 469 IHEALQFYKKMLLSNIRPSESVVSSLISCLSNYSMMVHGQQFHATTIKIGLDSHLLIQNS 528

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           LI +Y KC    +A+ +F  + + D V WN++I G +LN+L   A   F+ M + ++ P 
Sbjct: 529 LISLYCKCGEMIIAQSIFDLMAKRDKVTWNTIIHGYALNNLGQNAVEMFESMTKAQVDPD 588

Query: 505 QFSFATVLSSCAKLSSSFQGRQ-VHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
             +F  VLS+C  +S   + +   +A     G + +I   + +++++C+   I  A    
Sbjct: 589 DITFLGVLSACNHMSLLEEAKYFFNAMTCTYGILPNIMHYACMVDLFCRKCMIKEAEGLV 648

Query: 564 DMM-HGKNTVTWNEMIHGYAQNG 585
             M    ++  W  ++ G    G
Sbjct: 649 KSMPFEPDSAIWTSLLSGCRLTG 671



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 208/440 (47%), Gaps = 45/440 (10%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G+ +H   +++G   D  L   L+ +Y K  +   A+  FDKM    + SWNA+L    
Sbjct: 250 GGRCIHGLAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYI 309

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            SD ++ A KLFD M  R+ +SWN++I+  + +G    A  +Y+KM+ +           
Sbjct: 310 YSDKIDEARKLFDSMNNRDKISWNSMINGYINDGRIADATELYSKMTEKS---------- 359

Query: 126 VFKASTALLD--VEHGRRCHGLVIKIGLDK-NIYVANALLSLYAKCGWTKHAVPVFEEMS 182
             +A+TAL+   +++G       +   + + ++     LL  Y K G    A+ +F  M 
Sbjct: 360 -LEAATALMSWFIDNGMLDKARDMFYNMPQIDVMSCTTLLFGYVKGGHMDDALDLFHMMQ 418

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           +   VT+  M+SGL    ++ EA ++F     ++ + DSV+ S ++   A  G   E+  
Sbjct: 419 KRTVVTYNVMISGLFHQGKITEAYKLF----NESPTRDSVTWSCLVAGLATNGLIHEALQ 474

Query: 243 FAQSD-------------------NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYA 283
           F +                     + +S  VHGQQ H  TIK+G ++ L + NSL+ +Y 
Sbjct: 475 FYKKMLLSNIRPSESVVSSLISCLSNYSMMVHGQQFHATTIKIGLDSHLLIQNSLISLYC 534

Query: 284 KNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN 343
           K G+M  A+ IF  + +R  V+WN +I GY        A+E+ + M     +PD++T + 
Sbjct: 535 KCGEMIIAQSIFDLMAKRDKVTWNTIIHGYALNNLGQNAVEMFESMTKAQVDPDDITFLG 594

Query: 344 MLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
           +L AC     ++  +  F++M       P++  +  M+  + +    KEA  L + M F 
Sbjct: 595 VLSACNHMSLLEEAKYFFNAMTCTYGILPNIMHYACMVDLFCRKCMIKEAEGLVKSMPF- 653

Query: 399 GVKPDRTTLAIILSSCAAMG 418
             +PD      +LS C   G
Sbjct: 654 --EPDSAIWTSLLSGCRLTG 671



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 199/480 (41%), Gaps = 106/480 (22%)

Query: 332 CGFEPDEVTSIN--MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
           C  +   V S N  ++   +R+G ++  RE+FD MP   V SWN +++  +++ +H  A+
Sbjct: 27  CSSDAAAVVSGNNRLMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAV 86

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG---KQVHAASLKTASHIDNYVASGLI 446
             F EM+ +G +PD T+ +  LS+CA +  LE G   +QV          + N + SGL+
Sbjct: 87  GAFLEMRRQGFRPDHTSFSTALSACARLEALEMGSCLEQVLDGVESPNVALWNALISGLV 146

Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAG-LSLNSLDI------------------ 487
                  R   A + F R+P  ++V W +MI G  +++ +D+                  
Sbjct: 147 ----MNHRVGDARKAFDRMPVRNVVSWTAMIKGHFTVHEVDMAFQLFKLMPVKNSVSWCV 202

Query: 488 ------------EAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
                       EA   F  +  N    T      ++++ A + S   GR +H    K G
Sbjct: 203 MIGGFVTHEKFSEAVELFNSLMMNGEEVTNVILVKIVNAFAGMKSIRGGRCIHGLAVKSG 262

Query: 536 YVNDIFVGSALIEMYCK--------------------------CGDIYG-----ARQFFD 564
           +  D+ + ++L+ MYCK                          CG IY      AR+ FD
Sbjct: 263 FAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSDKIDEARKLFD 322

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLY---------------------------KDM 597
            M+ ++ ++WN MI+GY  +G   +A  LY                           +DM
Sbjct: 323 SMNNRDKISWNSMINGYINDGRIADATELYSKMTEKSLEAATALMSWFIDNGMLDKARDM 382

Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGH 657
             +  + D ++   +L      G +D  +++F+ MQ     +  +  Y  MI  L   G 
Sbjct: 383 FYNMPQIDVMSCTTLLFGYVKGGHMDDALDLFHMMQ-----KRTVVTYNVMISGLFHQGK 437

Query: 658 FHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF--RLDPKNSAPYSLLA 715
             EA  L +E P + D V W  L++    +  +  A +  +++    + P  S   SL++
Sbjct: 438 ITEAYKLFNESPTR-DSVTWSCLVAGLATNGLIHEALQFYKKMLLSNIRPSESVVSSLIS 496



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 149/325 (45%), Gaps = 28/325 (8%)

Query: 1   KKAHVAGKLLHAHILRNGLFD------------DTFLCNRLIELYSKCNNTHSAQHLFDK 48
           +K+  A   L +  + NG+ D            D   C  L+  Y K  +   A  LF  
Sbjct: 357 EKSLEAATALMSWFIDNGMLDKARDMFYNMPQIDVMSCTTLLFGYVKGGHMDDALDLFHM 416

Query: 49  MPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY 108
           M  + + ++N ++S       +  AYKLF+E P R+ V+W+ L++ L  NGL  +AL  Y
Sbjct: 417 MQKRTVVTYNVMISGLFHQGKITEAYKLFNESPTRDSVTWSCLVAGLATNGLIHEALQFY 476

Query: 109 NKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC 168
            KM      P+   ++S+    +    + HG++ H   IKIGLD ++ + N+L+SLY KC
Sbjct: 477 KKMLLSNIRPSESVVSSLISCLSNYSMMVHGQQFHATTIKIGLDSHLLIQNSLISLYCKC 536

Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
           G    A  +F+ M++ ++VT+  ++ G A  +    A+EMF  M +  V  D ++   VL
Sbjct: 537 GEMIIAQSIFDLMAKRDKVTWNTIIHGYALNNLGQNAVEMFESMTKAQVDPDDITFLGVL 596

Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM 288
             C       E+  F                + +T   G   ++     ++D++ +   +
Sbjct: 597 SACNHMSLLEEAKYF---------------FNAMTCTYGILPNIMHYACMVDLFCRKCMI 641

Query: 289 DSAEVIFSNLP-ERSVVSWNVMIAG 312
             AE +  ++P E     W  +++G
Sbjct: 642 KEAEGLVKSMPFEPDSAIWTSLLSG 666


>gi|302815759|ref|XP_002989560.1| hypothetical protein SELMODRAFT_129917 [Selaginella moellendorffii]
 gi|300142738|gb|EFJ09436.1| hypothetical protein SELMODRAFT_129917 [Selaginella moellendorffii]
          Length = 744

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 208/754 (27%), Positives = 353/754 (46%), Gaps = 93/754 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHA  +   L  +T + N LI +Y KC++   A+ LF  +  K              
Sbjct: 29  GRQLHAAAIARRLDRETLVANSLIAMYGKCHSLAEAERLFHGLERK-------------- 74

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                            + V+WN +I A   NG    A+ +Y +M +       +T   V
Sbjct: 75  -----------------DPVTWNTMIGAFTHNGQPRLAVDLYARMGSGD--RNSVTFLGV 115

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A +AL D++ GR     +       ++ V  A++ +Y +C   + A   F+ M   N 
Sbjct: 116 LEACSALGDLDLGRTVDSSIAGSEWRDDVVVGTAVVGMYGRCRSIEDARQRFDSMPVKNV 175

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+++  A+      AL   R M      ++ V+   V+ V  + G           
Sbjct: 176 VSWNALVTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQLG----------- 224

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
               S ++ G+ +H    + G      L N+L+ MY K  +++ +  +F  +  + VVSW
Sbjct: 225 ----SLSL-GRSIHLRVTRGGDGGGTRLENALISMYGKLENLEESLRVFEAMANKDVVSW 279

Query: 307 NVMIAGYGQKYQSTKAIELLQRMK-SCGFEPDEVTSINMLVACVRSGDIKTGREM----- 360
             MI  Y Q  +   A+EL +RM+      PD VT   +L AC   GD+ TG+E+     
Sbjct: 280 TAMITAYAQNGRERLALELYRRMELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVC 339

Query: 361 ------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
                                         F+S+ S    ++NAML++Y+Q+ +  +A+ 
Sbjct: 340 SSDFDVDAALKTSLVGLHGKCHCLEDAKEVFESISSRDRLAYNAMLAAYAQNGHPDDALN 399

Query: 391 LFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
           L+R+M    GV+P  T+ A+ L +C A+  L +GK +H         +D  +A+ L+G Y
Sbjct: 400 LYRQMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFY 459

Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
            +    E AER+F ++P  D+  +++MI   S N  +  A   + +M Q  + P + +F 
Sbjct: 460 GEVGSLEEAERIFEQMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFI 519

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           +VLS+C    SS    +VH +I   G+  D  +G+AL+ MY K G++  +R+ F  M  +
Sbjct: 520 SVLSAC----SSNLATEVHTEILHAGFEADGALGTALVCMYAKSGNLEESRRIFGAMKSR 575

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
           ++V+W  MI  +A++G   EA  L++ M   G+     T  ++L + S SG VD     F
Sbjct: 576 DSVSWTAMISAFARHGC--EAKLLFQGMALDGIDAKGSTLTSMLVSYSQSG-VDAARGFF 632

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
            +MQ D G  P  +HY+C++D L R+G   EA+ L+D MP + D V W  LL +C+ H +
Sbjct: 633 MAMQGDFGTCPAAEHYSCLVDLLARSGRVGEAKELVDSMPLEPDFVPWMTLLGACKTHGD 692

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGR 723
           +  AK AA  +  +D  +   Y + + + S   R
Sbjct: 693 LEQAKSAARGVLEVDSHSPGAYLVSSTLCSGWAR 726



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 153/615 (24%), Positives = 291/615 (47%), Gaps = 61/615 (9%)

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M     +P   TL S   A  +  ++  GR+ H   I   LD+   VAN+L+++Y KC  
Sbjct: 1   MEERRILPHRTTLVSAISACASSGNLARGRQLHAAAIARRLDRETLVANSLIAMYGKCHS 60

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
              A  +F  +   + VT+  M+       +   A++++  M   +   +SV+   VL  
Sbjct: 61  LAEAERLFHGLERKDPVTWNTMIGAFTHNGQPRLAVDLYARM--GSGDRNSVTFLGVLEA 118

Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
           C+  G   + D+    D+    ++ G +         +  D+ +  +++ MY +   ++ 
Sbjct: 119 CSALG---DLDLGRTVDS----SIAGSE---------WRDDVVVGTAVVGMYGRCRSIED 162

Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
           A   F ++P ++VVSWN ++  Y +      A+  L+ M   G + + VT + ++    +
Sbjct: 163 ARQRFDSMPVKNVVSWNALVTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQ 222

Query: 351 SGDIKTGREM-----------------------------------FDSMPSPSVSSWNAM 375
            G +  GR +                                   F++M +  V SW AM
Sbjct: 223 LGSLSLGRSIHLRVTRGGDGGGTRLENALISMYGKLENLEESLRVFEAMANKDVVSWTAM 282

Query: 376 LSSYSQSENHKEAIKLFREMQF-RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
           +++Y+Q+   + A++L+R M+  + V+PDR T A +L +C+ +G L +GK+++A    + 
Sbjct: 283 ITAYAQNGRERLALELYRRMELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSD 342

Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
             +D  + + L+G++ KC   E A+ VF  I   D + +N+M+A  + N    +A   ++
Sbjct: 343 FDVDAALKTSLVGLHGKCHCLEDAKEVFESISSRDRLAYNAMLAAYAQNGHPDDALNLYR 402

Query: 495 QMRQNE-MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
           QM   E + PT  SFA  L +C  L     G+ +H +I+  G   D  + + L+  Y + 
Sbjct: 403 QMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEV 462

Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
           G +  A + F+ M  K+  +++ MI  Y+QNG    A+ +Y +M   G+KPD++ F+++L
Sbjct: 463 GSLEEAERIFEQMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVL 522

Query: 614 TACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDD 673
           +ACS +   +V  EI ++     G E      T ++    ++G+  E+  +   M  +D 
Sbjct: 523 SACSSNLATEVHTEILHA-----GFEADGALGTALVCMYAKSGNLEESRRIFGAMKSRDS 577

Query: 674 PVIWEVLLSSCRLHA 688
            V W  ++S+   H 
Sbjct: 578 -VSWTAMISAFARHG 591



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 172/348 (49%), Gaps = 13/348 (3%)

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           M+ R + P RTTL   +S+CA+ G L  G+Q+HAA++      +  VA+ LI +Y KC  
Sbjct: 1   MEERRILPHRTTLVSAISACASSGNLARGRQLHAAAIARRLDRETLVANSLIAMYGKCHS 60

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
              AER+FH +   D V WN+MI   + N     A   + +M   +      +F  VL +
Sbjct: 61  LAEAERLFHGLERKDPVTWNTMIGAFTHNGQPRLAVDLYARMGSGDR--NSVTFLGVLEA 118

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
           C+ L     GR V + I    + +D+ VG+A++ MY +C  I  ARQ FD M  KN V+W
Sbjct: 119 CSALGDLDLGRTVDSSIAGSEWRDDVVVGTAVVGMYGRCRSIEDARQRFDSMPVKNVVSW 178

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI-FNSMQ 633
           N ++  YA+NG+   A+R  ++M   G K + +TF+ ++   +  G + +G  I     +
Sbjct: 179 NALVTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRVTR 238

Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
              G    L++   +I   G+  +  E+  + + M  K D V W  ++++   +   RLA
Sbjct: 239 GGDGGGTRLEN--ALISMYGKLENLEESLRVFEAMANK-DVVSWTAMITAYAQNGRERLA 295

Query: 694 ---KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC 738
               R  E   R+ P +   Y+ +    S LG   DL   +E+ +  C
Sbjct: 296 LELYRRMELEKRVRP-DRVTYAAVLGACSGLG---DLSTGKEIYARVC 339



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/437 (19%), Positives = 170/437 (38%), Gaps = 77/437 (17%)

Query: 336 PDEVTSINMLVACVRSGDIKTGREM----------------------------------- 360
           P   T ++ + AC  SG++  GR++                                   
Sbjct: 8   PHRTTLVSAISACASSGNLARGRQLHAAAIARRLDRETLVANSLIAMYGKCHSLAEAERL 67

Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI--ILSSCAAMG 418
           F  +      +WN M+ +++ +   + A+ L+  M       DR ++    +L +C+A+G
Sbjct: 68  FHGLERKDPVTWNTMIGAFTHNGQPRLAVDLYARMG----SGDRNSVTFLGVLEACSALG 123

Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
            L+ G+ V ++   +    D  V + ++G+Y +C+  E A + F  +P  ++V WN+++ 
Sbjct: 124 DLDLGRTVDSSIAGSEWRDDVVVGTAVVGMYGRCRSIEDARQRFDSMPVKNVVSWNALVT 183

Query: 479 GLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
             + N     A    ++M  +       +F  V+    +L S   GR +H ++ + G   
Sbjct: 184 SYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRVTRGGDGG 243

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
              + +ALI MY K  ++  + + F+ M  K+ V+W                        
Sbjct: 244 GTRLENALISMYGKLENLEESLRVFEAMANKDVVSWT----------------------- 280

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
                       A++TA + +G   + +E++  M+L+  V P    Y  ++      G  
Sbjct: 281 ------------AMITAYAQNGRERLALELYRRMELEKRVRPDRVTYAAVLGACSGLGDL 328

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
              + +   +   D  V   +  S   LH      + A E    +  ++   Y+ +   Y
Sbjct: 329 STGKEIYARVCSSDFDVDAALKTSLVGLHGKCHCLEDAKEVFESISSRDRLAYNAMLAAY 388

Query: 719 SSLGRWDD-LRAVRELM 734
           +  G  DD L   R++M
Sbjct: 389 AQNGHPDDALNLYRQMM 405



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 128/308 (41%), Gaps = 54/308 (17%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V GK LH  I   G+  D  L   L+  Y +  +   A+ +F++MP KD++S++A     
Sbjct: 431 VTGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSA----- 485

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                     +I A  +NG E +A+++Y +M  +G  P  +   
Sbjct: 486 --------------------------MIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFI 519

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           SV  A ++ L  E     H  ++  G + +  +  AL+ +YAK G  + +  +F  M   
Sbjct: 520 SVLSACSSNLATE----VHTEILHAGFEADGALGTALVCMYAKSGNLEESRRIFGAMKSR 575

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++TAM+S  A+     EA  +F+ M    +     +L+S+L   ++ G       F 
Sbjct: 576 DSVSWTAMISAFARHG--CEAKLLFQGMALDGIDAKGSTLTSMLVSYSQSGVDAARGFFM 633

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSV 303
                F      +   C                L+D+ A++G +  A+ +  ++P E   
Sbjct: 634 AMQGDFGTCPAAEHYSC----------------LVDLLARSGRVGEAKELVDSMPLEPDF 677

Query: 304 VSWNVMIA 311
           V W  ++ 
Sbjct: 678 VPWMTLLG 685


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 176/542 (32%), Positives = 287/542 (52%), Gaps = 51/542 (9%)

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
           +R +HG       +K GF  DL +   L+++Y+K G M+SA  +F NLP R+V +W  ++
Sbjct: 77  ARMIHGH-----IVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLL 131

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------- 360
            GY Q      A++L  +M   G  P   T   +L AC     I+ G+++          
Sbjct: 132 TGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHID 191

Query: 361 FDSMPSPSVS-------------------------SWNAMLSSYSQSENHKEAIKLFREM 395
           FD+    S+S                         SW +++SS   +     ++  F +M
Sbjct: 192 FDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDM 251

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
              G+KP+  TL  +LS+C  M  L+ G Q+H+ S+K        + + ++ +Y KC   
Sbjct: 252 LSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWL 311

Query: 456 ELAERVFHRIPELDIVCWNSMIAG----LSLNSLDI-------EAFMFFKQMRQNEMYPT 504
             A+++F  +  L++V WN+MIAG    + L   D+        A   F+++ ++ M P 
Sbjct: 312 IEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPD 371

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            F+F++VLS C+ L +  QG Q+H QI K G + D+ VG+AL+ MY KCG I  A + F 
Sbjct: 372 LFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFL 431

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            M  +  ++W  MI G+A++G   +A++L++DM   G+KP+ +TFV +L+ACSH+GL D 
Sbjct: 432 EMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADE 491

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
            +  F  MQ  + ++P++DH+ C+ID   R G   EA  ++ +M  + +  IW +L++ C
Sbjct: 492 ALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGC 551

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
           R H    L   AAE+L +L PK+   Y  L N++ S GRW D+  VR+LM E  + K   
Sbjct: 552 RSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKD 611

Query: 745 YS 746
           +S
Sbjct: 612 WS 613



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 192/377 (50%), Gaps = 35/377 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N++ S   K   LEFA K F  + E++V+SW ++IS+   NG   ++LS +  M ++G  
Sbjct: 198 NSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMK 257

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   TL SV  A   +L ++ G + H L IK+G   +I + N+++ LY KCGW   A  +
Sbjct: 258 PNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKL 317

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVE-----------ALEMFRLMIRKAVSIDSVSLSS 226
           FE M   N VT+ AM++G AK   + E           AL MF+ + R  +  D  + SS
Sbjct: 318 FEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSS 377

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           VL VC        S++ A           G+Q+H   IK G  AD+ +  +L+ MY K G
Sbjct: 378 VLSVC--------SNLVALE--------QGEQIHGQIIKSGVLADVVVGTALVSMYNKCG 421

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
            +D A   F  +P R+++SW  MI G+ +   S +A++L + M+  G +P++VT + +L 
Sbjct: 422 SIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLS 481

Query: 347 ACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           AC  +G        F+ M       P +  +  ++  Y +    +EA  +  +M F   +
Sbjct: 482 ACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNF---E 538

Query: 402 PDRTTLAIILSSCAAMG 418
           P+ T  +++++ C + G
Sbjct: 539 PNETIWSMLIAGCRSHG 555



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/527 (25%), Positives = 246/527 (46%), Gaps = 73/527 (13%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
            R  HG ++K G  ++++V   L+++Y+KCG  + A  VF+ +   N   +T +++G  +
Sbjct: 77  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 136

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
               + AL++F  M+       + +L  VL  C+     ++S  F            G+Q
Sbjct: 137 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACS----SLQSIEF------------GKQ 180

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           VH   IK   + D  + NSL   Y+K   ++ A   F  + E+ V+SW  +I+      Q
Sbjct: 181 VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQ 240

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGDIKTG---------- 357
           + +++     M S G +P+E T  ++L AC           + S  IK G          
Sbjct: 241 AARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNS 300

Query: 358 --------------REMFDSMPSPSVSSWNAMLSSYSQSENHKE-----------AIKLF 392
                         +++F+ M + ++ +WNAM++ +++  +  E           A+ +F
Sbjct: 301 IMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMF 360

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           +++   G+KPD  T + +LS C+ +  LE G+Q+H   +K+    D  V + L+ +Y+KC
Sbjct: 361 QKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKC 420

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              + A + F  +P   ++ W SMI G + + L  +A   F+ MR   + P Q +F  VL
Sbjct: 421 GSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVL 480

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMMHG--- 568
           S+C+    + +       ++K   +  +    A LI+MY + G +  A   FD++H    
Sbjct: 481 SACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEA---FDVVHKMNF 537

Query: 569 -KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI-TFVAIL 613
             N   W+ +I G   +G  D      + ++   +KP D+ T+V++L
Sbjct: 538 EPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVETYVSLL 582



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 242/523 (46%), Gaps = 99/523 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            +++H HI++ G  +D F+   L+ +YSKC                              
Sbjct: 77  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGV---------------------------- 108

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A+K+FD +P RNV +W  L++  V+N     AL ++ KM   G  P++ TL  V
Sbjct: 109 ---MESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIV 165

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++L  +E G++ H  +IK  +D +  + N+L S Y+K    + A+  F+ + E + 
Sbjct: 166 LNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDV 225

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++T+++S      +   +L  F  M+   +  +  +L+SVL  C          V    
Sbjct: 226 ISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACC---------VMLTL 276

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D        G Q+H L+IKLG+ + + + NS++ +Y K G +  A+ +F  +   ++V+W
Sbjct: 277 D-------LGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTW 329

Query: 307 NVMIAGYGQKY-----------QSTKAIELLQRMKSCGFEPDEVTSINMLVAC------- 348
           N MIAG+ +               + A+ + Q++   G +PD  T  ++L  C       
Sbjct: 330 NAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALE 389

Query: 349 ---------VRSG---DIKTGREM----------------FDSMPSPSVSSWNAMLSSYS 380
                    ++SG   D+  G  +                F  MPS ++ SW +M++ ++
Sbjct: 390 QGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFA 449

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAASLKTASHI 437
           +    ++A++LF +M+  G+KP++ T   +LS+C+  G+ +      ++          +
Sbjct: 450 RHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVM 509

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           D++    LI +Y +  R E A  V H++  E +   W+ +IAG
Sbjct: 510 DHFAC--LIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAG 550



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 144/285 (50%), Gaps = 4/285 (1%)

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G + + +    +L  C    +    + +H   +KT  H D +V + L+ +YSKC   E A
Sbjct: 53  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            +VF  +P  ++  W +++ G   NS  + A   F +M +   YP+ ++   VL++C+ L
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
            S   G+QVHA + K     D  +G++L   Y K   +  A + F ++  K+ ++W  +I
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 232

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN-SMQLDHG 637
                NG    ++  + DM++ G+KP++ T  ++L+AC     +D+G +I + S++L +G
Sbjct: 233 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYG 292

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
              IL   + M   L + G   EA+ L + M    + V W  +++
Sbjct: 293 -SSILIKNSIMYLYL-KCGWLIEAQKLFEGMETL-NLVTWNAMIA 334



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 166/371 (44%), Gaps = 40/371 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H+  ++ G      + N ++ LY KC     AQ LF+ M   ++ +WNA+++   K
Sbjct: 279 GAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAK 338

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             DL           E +V        A  ++G    AL+++ K+   G  P   T +SV
Sbjct: 339 MMDL----------AEDDV--------AAHKSG--STALAMFQKLYRSGMKPDLFTFSSV 378

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               + L+ +E G + HG +IK G+  ++ V  AL+S+Y KCG    A   F EM     
Sbjct: 379 LSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTM 438

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++T+M++G A+     +AL++F  M    +  + V+   VL  C+  G   E+  + + 
Sbjct: 439 ISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFEL 498

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA-EVIFSNLPERSVVS 305
             K   N+     H                 L+DMY + G ++ A +V+     E +   
Sbjct: 499 MQK-QYNIKPVMDHF--------------ACLIDMYLRLGRVEEAFDVVHKMNFEPNETI 543

Query: 306 WNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           W+++IAG   +G+      A E L ++K    E   V+ +NM ++  R  D+   R++  
Sbjct: 544 WSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVET-YVSLLNMHISAGRWKDVSKVRKLMK 602

Query: 363 SMPSPSVSSWN 373
                 +  W+
Sbjct: 603 EEKVGKLKDWS 613


>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 632

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 179/521 (34%), Positives = 278/521 (53%), Gaps = 43/521 (8%)

Query: 264 IKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI 323
           +K G++ D ++ N +L +YAK G ++ A  +F  +P+R+V  WNVMI+GY +     +A 
Sbjct: 111 LKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEAS 170

Query: 324 ELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
            L   M       + +T   M+    + G++KT R  FD MP  SV SWNAMLS Y+Q  
Sbjct: 171 TLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGG 230

Query: 384 NHKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMG-ILESGKQVHAASLKTASHIDNYV 441
             +E I+LF +M   G V+PD TT A ++SSC+++G    S   V     K     + +V
Sbjct: 231 APEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFV 290

Query: 442 ASGLIGIYSKCQRNELAERVFH----------------------------------RIPE 467
            + L+ +++KC   E A ++F                                   ++P+
Sbjct: 291 KTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQ 350

Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE--MYPTQFSFATVLSSCAKLSSSFQGR 525
            D V WNSMIAG + N    +A   F++M  +E    P + +  +V S+C  L     G 
Sbjct: 351 RDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGN 410

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
              + ++ +     I V ++LI MY +CG +  A   F  M  ++ V++N +I G+A++G
Sbjct: 411 WAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHG 470

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
           +G E++ L   M   G++PD IT++AILTACSH+GL+D G  +F S++      P +DHY
Sbjct: 471 HGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKF-----PDVDHY 525

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
            CMID LGRAG   EA  LI  MP +    I+  LL++  +H  V L + AA +LF+++P
Sbjct: 526 ACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEP 585

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
            NS  Y+LL+NIY+S GRW +   VR+ M +  + K    S
Sbjct: 586 HNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLS 626



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 244/528 (46%), Gaps = 81/528 (15%)

Query: 1   KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
           K A     L  AH+L++G   D ++ N ++ +Y+K      A+ LFD+MP + +  WN +
Sbjct: 97  KSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVM 156

Query: 61  LS-----------------------------------AQCKSDDLEFAYKLFDEMPERNV 85
           +S                                      K  +L+ A   FD+MPER+V
Sbjct: 157 ISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSV 216

Query: 86  VSWNNLISALVRNGLEEKALSVYNKMSNEGFV-PTHITLASVFKASTALLDVEHGRRCHG 144
           VSWN ++S   + G  E+ + ++N M + G V P   T A+V  + ++L     G  C  
Sbjct: 217 VSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSL-----GDPCLS 271

Query: 145 LVI------KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS---EPNEVTFTAMMSG 195
             I      K+G   N +V  ALL ++AKCG  + A  +FE++      + V + AM+S 
Sbjct: 272 ESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISA 331

Query: 196 LAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-----DVFAQSDNKF 250
            A+   +  A  +F  M ++    D+VS +S++    + G   ++     ++ +  D++ 
Sbjct: 332 YARVGDLPSAKHLFDKMPQR----DTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRK 387

Query: 251 SRNVHGQQV-----HCLTIKLG-----------FEADLHLSNSLLDMYAKNGDMDSAEVI 294
              V    V     H   + LG            +  + + NSL++MY++ G M  A +I
Sbjct: 388 PDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLI 447

Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
           F  +  R +VS+N +I+G+ +     ++IELL +MK  G EPD +T I +L AC  +G +
Sbjct: 448 FQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLL 507

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
             G+ +F+S+  P V  +  M+    ++   +EA+KL + M    ++P       +L++ 
Sbjct: 508 DEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMP---MEPHAGIYGSLLNAT 564

Query: 415 AAMGILESGKQVHAASLKTASH-IDNYVASGLIGIYSKCQRNELAERV 461
           +    +E G+   A   K   H   NY    L  IY+   R +  ++V
Sbjct: 565 SIHKQVELGELAAAKLFKVEPHNSGNYAL--LSNIYASAGRWKEGDKV 610



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 222/481 (46%), Gaps = 98/481 (20%)

Query: 44  HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEK 103
           H+      +D Y  N IL    K   +EFA KLFDEMP+R V  WN +IS   + G EE+
Sbjct: 109 HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 168

Query: 104 ALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS 163
           A ++++ M ++                                    + +N+     +++
Sbjct: 169 ASTLFHVMGDQE-----------------------------------ISRNVITWTTMIT 193

Query: 164 LYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSV 222
            +AK G  K A   F++M E + V++ AM+SG A+     E + +F  M+    V  D  
Sbjct: 194 GHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDET 253

Query: 223 SLSSVLGVCAREG--CGVESDVFAQSD------NKFSR----NVHG-----QQVHCLTIK 265
           + ++V+  C+  G  C  ES V    D      N F +    ++H      +  H +  +
Sbjct: 254 TWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQ 313

Query: 266 LG---FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
           LG   + + +   N+++  YA+ GD+ SA+ +F  +P+R  VSWN MIAGY Q  +S KA
Sbjct: 314 LGVYKYRSSVPW-NAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKA 372

Query: 323 IELLQRMKSC--GFEPDEVTSINMLVACVRSGDIKTGRE--------------------- 359
           I+L + M S     +PDEVT +++  AC   G++  G                       
Sbjct: 373 IKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLI 432

Query: 360 --------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
                         +F  M +  + S+N ++S +++  +  E+I+L  +M+  G++PDR 
Sbjct: 433 NMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRI 492

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
           T   IL++C+  G+L+ G+++   S+K    +D+Y    +I +  +  R E A ++   +
Sbjct: 493 TYIAILTACSHAGLLDEGQRLF-ESIKFPD-VDHYAC--MIDMLGRAGRLEEAMKLIQSM 548

Query: 466 P 466
           P
Sbjct: 549 P 549



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 198/451 (43%), Gaps = 75/451 (16%)

Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV-IFSNLPERSVVSWNVMIAGYGQKYQS 319
           C         D+ +   +L  Y++ G      V +F ++ +   +  N        K   
Sbjct: 41  CHIFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAG 100

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSY 379
           ++++  L  +   G++ D      +L    + G I+  R++FD MP  +V+ WN M+S Y
Sbjct: 101 SESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGY 160

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
            +  N +EA  LF  M  + +  +  T   +++  A  G           +LKT      
Sbjct: 161 WKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKG-----------NLKT------ 203

Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-RQ 498
                             A   F ++PE  +V WN+M++G +      E    F  M   
Sbjct: 204 ------------------ARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSP 245

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQI-EKDGYVNDIFVGSALIEMYCKC---- 553
             + P + ++ATV+SSC+ L        +  ++ +K G+  + FV +AL++M+ KC    
Sbjct: 246 GNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLE 305

Query: 554 ------------------------------GDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
                                         GD+  A+  FD M  ++TV+WN MI GY Q
Sbjct: 306 AAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQ 365

Query: 584 NGYGDEAVRLYKDMIAS--GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
           NG   +A++L+++MI+S    KPD++T V++ +AC H G + +G    + ++++H ++  
Sbjct: 366 NGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNH-IQIS 424

Query: 642 LDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           +  Y  +I+   R G   +A ++  EM  +D
Sbjct: 425 ISVYNSLINMYSRCGSMQDAVLIFQEMATRD 455



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 16/230 (6%)

Query: 461 VFHRIPELDIVCWNSMIAGLSLNSLDIEAFM-FFKQMRQN-EMYPTQFSFATVLSSCAKL 518
           +FH     D+  +  M+   S   +  + F+  FK M Q+ ++ P    ++ ++ S    
Sbjct: 43  IFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSE 102

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
           S  F      A + K GY  D +V + ++ +Y K G I  AR+ FD M  +    WN MI
Sbjct: 103 SMLFL-----AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMI 157

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
            GY + G  +EA  L+  M    +  + IT+  ++T  +  G +      F+ M      
Sbjct: 158 SGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMP----- 212

Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEM----PCKDDPVIWEVLLSSC 684
           E  +  +  M+    + G   E   L ++M      + D   W  ++SSC
Sbjct: 213 ERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSC 262


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 170/490 (34%), Positives = 271/490 (55%), Gaps = 35/490 (7%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +Q+H      G  AD   +N LL  YA  GD  +A  +F  +P+R+V+SWN++I GY   
Sbjct: 62  RQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGY--- 118

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                           V++GD++T R++FD MP+ +V++WNAM+
Sbjct: 119 --------------------------------VKNGDLETARKLFDEMPARNVATWNAMV 146

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           +  + S  ++E++  F  M+  G++PD   L  +   CA +  + SG+QVHA  +++   
Sbjct: 147 AGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLD 206

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D  V S L  +Y +C      E     +P L+IV  N+ I+G + N     A  FF  M
Sbjct: 207 RDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLM 266

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R   +     +F + ++SC+ L++  QG+Q+HA   K G    + V ++L+ MY +CG +
Sbjct: 267 RGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCL 326

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             + +      G + V  + MI  Y  +G+G +AV L+K M+A+G +P+++TF+ +L AC
Sbjct: 327 GDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYAC 386

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SHSGL D G+  F  M   +G++P + HYTC++D LGR+G  +EAE LI  MP + D VI
Sbjct: 387 SHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVI 446

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W+ LLS+C+      +A+R AE +  LDP +SA Y LL+NI ++  RW+D+  VRE M E
Sbjct: 447 WKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMRE 506

Query: 737 NCIVKDPAYS 746
             + K+P  S
Sbjct: 507 QNVRKEPGVS 516



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 204/412 (49%), Gaps = 24/412 (5%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + LHA    +G   D F  N L+  Y+   +  +A+ LF+++P +++ SWN ++    K+
Sbjct: 62  RQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKN 121

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            DLE A KLFDEMP RNV +WN +++ L  +GL E++L  +  M  EG  P    L S+F
Sbjct: 122 GDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLF 181

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           +    L DV  GR+ H  V++ GLD+++ V ++L  +Y +CG+ +        +   N V
Sbjct: 182 RCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIV 241

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           +    +SG  +      ALE F LM    V  ++V+  S +  C        SD+ A + 
Sbjct: 242 SCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSC--------SDLAALA- 292

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   GQQ+H L IK G +  + +  SL+ MY++ G +  +E +        +V  +
Sbjct: 293 -------QGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCS 345

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
            MI+ YG      KA+ L ++M + G EP+EVT + +L AC  SG    G   F+ M   
Sbjct: 346 AMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKT 405

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               PSV  +  ++    +S    EA  L   M    V+PD      +LS+C
Sbjct: 406 YGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMP---VQPDGVIWKTLLSAC 454



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 157/336 (46%), Gaps = 41/336 (12%)

Query: 386 KEAI-KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
           KEA+ + FRE    G+  +    + I  +C A+ +L   +Q+HA +  + +  D + A+ 
Sbjct: 30  KEALHRRFRE----GLWSEPGLFSHIFRACQALPLL---RQLHAFAATSGAAADRFTANH 82

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIV-------------------------------CW 473
           L+  Y+       A  +F RIP+ +++                                W
Sbjct: 83  LLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATW 142

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
           N+M+AGL+ + L+ E+  FF  MR+  M P ++   ++   CA L     GRQVHA + +
Sbjct: 143 NAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVR 202

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G   D+ VGS+L  MY +CG +         +   N V+ N  I G  QNG  + A+  
Sbjct: 203 SGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEF 262

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           +  M  +GV+ + +TFV+ +T+CS    +  G +I +++ +  GV+ ++   T ++    
Sbjct: 263 FCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQI-HALAIKTGVDKVVPVMTSLVHMYS 321

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           R G   ++E +  E     D V+   ++S+   H +
Sbjct: 322 RCGCLGDSERVCLEYS-GTDLVLCSAMISAYGFHGH 356



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/421 (20%), Positives = 167/421 (39%), Gaps = 74/421 (17%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V+G+ +HA+++R+GL  D  + + L  +Y +C      +     +P  +I S N  +S +
Sbjct: 191 VSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGR 250

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                           +NG  E AL  +  M   G     +T  
Sbjct: 251 -------------------------------TQNGDAEGALEFFCLMRGAGVEANAVTFV 279

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S   + + L  +  G++ H L IK G+DK + V  +L+ +Y++CG    +  V  E S  
Sbjct: 280 SAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGT 339

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V  +AM+S         +A+ +F+ M+      + V+  ++L  C+  G         
Sbjct: 340 DLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSG--------- 390

Query: 245 QSDNKFSRNVHGQQVHC---LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-E 300
                    +  + ++C   +T   G +  +     ++D+  ++G ++ AE +  ++P +
Sbjct: 391 ---------LKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQ 441

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI----NMLVACVRSGDIKT 356
              V W  +++    + +   A  + +R+     +P +  S     N+     R  D+  
Sbjct: 442 PDGVIWKTLLSACKTQKKFDMAERIAERVIE--LDPHDSASYVLLSNIRATSSRWEDVSK 499

Query: 357 GREMF---DSMPSPSVSSWNAMLSSYSQ----SENH---KEAIKLFREMQFR----GVKP 402
            RE     +    P V SW  +     Q     E+H   +E ++   EM  R    G  P
Sbjct: 500 VRETMREQNVRKEPGV-SWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAP 558

Query: 403 D 403
           D
Sbjct: 559 D 559


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 175/537 (32%), Positives = 285/537 (53%), Gaps = 51/537 (9%)

Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
           +R +HG       +K GF  DL +   L+++Y+K G M+SA  +F NLP R+V +W  ++
Sbjct: 83  ARMIHGH-----IVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLL 137

Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM---------- 360
            GY Q      A++L  +M   G  P   T   +L AC     I+ G+++          
Sbjct: 138 TGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHID 197

Query: 361 FDSMPSPSVS-------------------------SWNAMLSSYSQSENHKEAIKLFREM 395
           FD+    S+S                         SW +++SS   +     ++  F +M
Sbjct: 198 FDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDM 257

Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
              G+KP+  TL  +LS+C  M  L+ G Q+H+ S+K        + + ++ +Y KC   
Sbjct: 258 LSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWL 317

Query: 456 ELAERVFHRIPELDIVCWNSMIAG----LSLNSLDI-------EAFMFFKQMRQNEMYPT 504
             A+++F  +  L++V WN+MIAG    + L   D+        A   F+++ ++ M P 
Sbjct: 318 IEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPD 377

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
            F+F++VLS C+ L +  QG Q+H QI K G + D+ VG+AL+ MY KCG I  A + F 
Sbjct: 378 LFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFL 437

Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
            M  +  ++W  MI G+A++G   +A++L++DM   G+KP+ +TFV +L+ACSH+GL D 
Sbjct: 438 EMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADE 497

Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
            +  F  MQ  + ++P++DH+ C+ID   R G   EA  ++ +M  + +  IW +L++ C
Sbjct: 498 ALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGC 557

Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
           R H    L   AAE+L +L PK+   Y  L N++ S GRW D+  VR+LM E  + K
Sbjct: 558 RSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGK 614



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 192/377 (50%), Gaps = 35/377 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
           N++ S   K   LEFA K F  + E++V+SW ++IS+   NG   ++LS +  M ++G  
Sbjct: 204 NSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMK 263

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P   TL SV  A   +L ++ G + H L IK+G   +I + N+++ LY KCGW   A  +
Sbjct: 264 PNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKL 323

Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVE-----------ALEMFRLMIRKAVSIDSVSLSS 226
           FE M   N VT+ AM++G AK   + E           AL MF+ + R  +  D  + SS
Sbjct: 324 FEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSS 383

Query: 227 VLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG 286
           VL VC        S++ A           G+Q+H   IK G  AD+ +  +L+ MY K G
Sbjct: 384 VLSVC--------SNLVALE--------QGEQIHGQIIKSGVLADVVVGTALVSMYNKCG 427

Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
            +D A   F  +P R+++SW  MI G+ +   S +A++L + M+  G +P++VT + +L 
Sbjct: 428 SIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLS 487

Query: 347 ACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
           AC  +G        F+ M       P +  +  ++  Y +    +EA  +  +M F   +
Sbjct: 488 ACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNF---E 544

Query: 402 PDRTTLAIILSSCAAMG 418
           P+ T  +++++ C + G
Sbjct: 545 PNETIWSMLIAGCRSHG 561



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/527 (25%), Positives = 246/527 (46%), Gaps = 73/527 (13%)

Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
            R  HG ++K G  ++++V   L+++Y+KCG  + A  VF+ +   N   +T +++G  +
Sbjct: 83  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 142

Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
               + AL++F  M+       + +L  VL  C+     ++S  F            G+Q
Sbjct: 143 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACS----SLQSIEF------------GKQ 186

Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQ 318
           VH   IK   + D  + NSL   Y+K   ++ A   F  + E+ V+SW  +I+      Q
Sbjct: 187 VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQ 246

Query: 319 STKAIELLQRMKSCGFEPDEVTSINMLVAC-----------VRSGDIKTG---------- 357
           + +++     M S G +P+E T  ++L AC           + S  IK G          
Sbjct: 247 AARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNS 306

Query: 358 --------------REMFDSMPSPSVSSWNAMLSSYSQSENHKE-----------AIKLF 392
                         +++F+ M + ++ +WNAM++ +++  +  E           A+ +F
Sbjct: 307 IMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMF 366

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
           +++   G+KPD  T + +LS C+ +  LE G+Q+H   +K+    D  V + L+ +Y+KC
Sbjct: 367 QKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKC 426

Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
              + A + F  +P   ++ W SMI G + + L  +A   F+ MR   + P Q +F  VL
Sbjct: 427 GSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVL 486

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMMHG--- 568
           S+C+    + +       ++K   +  +    A LI+MY + G +  A   FD++H    
Sbjct: 487 SACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEA---FDVVHKMNF 543

Query: 569 -KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI-TFVAIL 613
             N   W+ +I G   +G  D      + ++   +KP D+ T+V++L
Sbjct: 544 EPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVETYVSLL 588



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 242/523 (46%), Gaps = 99/523 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
            +++H HI++ G  +D F+   L+ +YSKC                              
Sbjct: 83  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGV---------------------------- 114

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
              +E A+K+FD +P RNV +W  L++  V+N     AL ++ KM   G  P++ TL  V
Sbjct: 115 ---MESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIV 171

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A ++L  +E G++ H  +IK  +D +  + N+L S Y+K    + A+  F+ + E + 
Sbjct: 172 LNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDV 231

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++T+++S      +   +L  F  M+   +  +  +L+SVL  C          V    
Sbjct: 232 ISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACC---------VMLTL 282

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
           D        G Q+H L+IKLG+ + + + NS++ +Y K G +  A+ +F  +   ++V+W
Sbjct: 283 D-------LGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTW 335

Query: 307 NVMIAGYGQKY-----------QSTKAIELLQRMKSCGFEPDEVTSINMLVAC------- 348
           N MIAG+ +               + A+ + Q++   G +PD  T  ++L  C       
Sbjct: 336 NAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALE 395

Query: 349 ---------VRSG---DIKTGREM----------------FDSMPSPSVSSWNAMLSSYS 380
                    ++SG   D+  G  +                F  MPS ++ SW +M++ ++
Sbjct: 396 QGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFA 455

Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAASLKTASHI 437
           +    ++A++LF +M+  G+KP++ T   +LS+C+  G+ +      ++          +
Sbjct: 456 RHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVM 515

Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
           D++    LI +Y +  R E A  V H++  E +   W+ +IAG
Sbjct: 516 DHFAC--LIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAG 556



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 144/285 (50%), Gaps = 4/285 (1%)

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           G + + +    +L  C    +    + +H   +KT  H D +V + L+ +YSKC   E A
Sbjct: 59  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118

Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
            +VF  +P  ++  W +++ G   NS  + A   F +M +   YP+ ++   VL++C+ L
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178

Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
            S   G+QVHA + K     D  +G++L   Y K   +  A + F ++  K+ ++W  +I
Sbjct: 179 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 238

Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN-SMQLDHG 637
                NG    ++  + DM++ G+KP++ T  ++L+AC     +D+G +I + S++L +G
Sbjct: 239 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYG 298

Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
              IL   + M   L + G   EA+ L + M    + V W  +++
Sbjct: 299 -SSILIKNSIMYLYL-KCGWLIEAQKLFEGMETL-NLVTWNAMIA 340



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 166/371 (44%), Gaps = 40/371 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +H+  ++ G      + N ++ LY KC     AQ LF+ M   ++ +WNA+++   K
Sbjct: 285 GAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAK 344

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             DL           E +V        A  ++G    AL+++ K+   G  P   T +SV
Sbjct: 345 MMDL----------AEDDV--------AAHKSG--STALAMFQKLYRSGMKPDLFTFSSV 384

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
               + L+ +E G + HG +IK G+  ++ V  AL+S+Y KCG    A   F EM     
Sbjct: 385 LSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTM 444

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++T+M++G A+     +AL++F  M    +  + V+   VL  C+  G   E+  + + 
Sbjct: 445 ISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFEL 504

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA-EVIFSNLPERSVVS 305
             K   N+     H                 L+DMY + G ++ A +V+     E +   
Sbjct: 505 MQK-QYNIKPVMDHF--------------ACLIDMYLRLGRVEEAFDVVHKMNFEPNETI 549

Query: 306 WNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
           W+++IAG   +G+      A E L ++K    E   V+ +NM ++  R  D+   R++  
Sbjct: 550 WSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVET-YVSLLNMHISAGRWKDVSKVRKLMK 608

Query: 363 SMPSPSVSSWN 373
                 +  W+
Sbjct: 609 EEKVGKLKDWS 619


>gi|255594521|ref|XP_002536106.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223520840|gb|EEF26277.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 519

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 188/567 (33%), Positives = 284/567 (50%), Gaps = 85/567 (14%)

Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
           K  +  N +L+ YAK G    A  VF+E+ + + V++T M+ G  +  R   A++MF  M
Sbjct: 4   KTTFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMFVAM 63

Query: 213 IRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
           ++  V     ++++V   CA  G     D+             G+++H   IKLG    +
Sbjct: 64  MKDKVLPTQFTVTNVFASCAALGA---LDI-------------GKKIHSFVIKLGLSGCV 107

Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
            ++NSLL+MYAK GD   A+++F  +  RS+ SWN+MI                      
Sbjct: 108 PVANSLLNMYAKAGDSVMAKIVFDRMRLRSISSWNIMI---------------------- 145

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
                   S++M       G        F+ M    V +WN+M++ YSQ    KEA++LF
Sbjct: 146 --------SLHM-----HGGRADLALAQFEQMSERDVVTWNSMITGYSQHGFDKEALELF 192

Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
             M    +KPDR TLA ILS+CA +  L  GKQ+H+  ++T   I   V + LI +Y+K 
Sbjct: 193 SRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGVVQNALISMYAKT 252

Query: 453 QRNELAE---------------------------------RVFHRIPELDIVCWNSMIAG 479
              E+A+                                  +F  + + D+V W +MI G
Sbjct: 253 GGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAWTAMIVG 312

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
              N L+ +A   F+ M +    P  F+ A +LS  + ++S   G+Q+HA   + G    
Sbjct: 313 YVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASAIRSGENLS 372

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMH-GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           + VG+ALI MY K G I  A+Q F+++   K+TV+W  MI    Q+G G E++ L++ M+
Sbjct: 373 VSVGNALITMYAKAGSITDAQQVFNLIQRNKDTVSWTSMIIALGQHGLGQESIELFEKML 432

Query: 599 ASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
           A G+KPD IT+V +L+AC+H GLV+ G   FN M   H +EP L HY CMID  GRAG  
Sbjct: 433 ALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKIEPTLSHYACMIDLFGRAGLL 492

Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCR 685
            EA   I+ MP + D + W  LLSSC+
Sbjct: 493 QEAFSFIENMPIEPDVIAWGSLLSSCK 519



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 228/448 (50%), Gaps = 60/448 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H+ +++ GL     + N L+ +Y+K  ++  A+ +FD+M  + I SWN ++S    
Sbjct: 91  GKKIHSFVIKLGLSGCVPVANSLLNMYAKAGDSVMAKIVFDRMRLRSISSWNIMISLHMH 150

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
               + A   F++M ER+VV+WN++I+   ++G +++AL ++++M  +   P   TLAS+
Sbjct: 151 GGRADLALAQFEQMSERDVVTWNSMITGYSQHGFDKEALELFSRMLEDSLKPDRFTLASI 210

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE--MSEP 184
             A   + ++  G++ H  +I+   D +  V NAL+S+YAK G  + A  + E+  +S+ 
Sbjct: 211 LSACANIENLNLGKQIHSYIIRTEFDISGVVQNALISMYAKTGGVEIAQSIVEQSGISDL 270

Query: 185 NEVTFTAMMSGLAKTDRVV-------------------------------EALEMFRLMI 213
           N + FTA++ G  K   +                                +A+E+FR+M 
Sbjct: 271 NVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAWTAMIVGYVQNGLNDDAMELFRIMA 330

Query: 214 RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH 273
           ++    +S +L+++L V               S N  S N HG+Q+H   I+ G    + 
Sbjct: 331 KEGPRPNSFTLAAMLSV---------------SSNVASLN-HGKQIHASAIRSGENLSVS 374

Query: 274 LSNSLLDMYAKNGDMDSAEVIFSNLPERS--VVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + N+L+ MYAK G +  A+ +F NL +R+   VSW  MI   GQ     ++IEL ++M +
Sbjct: 375 VGNALITMYAKAGSITDAQQVF-NLIQRNKDTVSWTSMIIALGQHGLGQESIELFEKMLA 433

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHK 386
            G +PD +T + +L AC   G ++ GR  F+ M S     P++S +  M+  + ++   +
Sbjct: 434 LGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKIEPTLSHYACMIDLFGRAGLLQ 493

Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSC 414
           EA      M    ++PD      +LSSC
Sbjct: 494 EAFSFIENMP---IEPDVIAWGSLLSSC 518



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 240/536 (44%), Gaps = 126/536 (23%)

Query: 49  MPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY 108
           MP K  +SWN IL+   K   L  A+ +FDE+P+R+ VSW  +I    + G  E A+ ++
Sbjct: 1   MPVKTTFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMF 60

Query: 109 NKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC 168
             M  +  +PT  T+ +VF +  AL  ++ G++ H  VIK+GL   + VAN+LL++YAK 
Sbjct: 61  VAMMKDKVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKA 120

Query: 169 G-------------------W------------TKHAVPVFEEMSEPNEVTFTAMMSGLA 197
           G                   W               A+  FE+MSE + VT+ +M++G +
Sbjct: 121 GDSVMAKIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYS 180

Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
           +     EALE+F  M+  ++  D  +L+S+L  CA               N  + N+ G+
Sbjct: 181 QHGFDKEALELFSRMLEDSLKPDRFTLASILSACA---------------NIENLNL-GK 224

Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV------------------------ 293
           Q+H   I+  F+    + N+L+ MYAK G ++ A+                         
Sbjct: 225 QIHSYIIRTEFDISGVVQNALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVK 284

Query: 294 ---------IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
                    IF +L +  VV+W  MI GY Q   +  A+EL + M   G  P+  T   M
Sbjct: 285 LGNITPARHIFDSLKDSDVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAM 344

Query: 345 L----------------VACVRSGD-------------------IKTGREMFDSMP-SPS 368
           L                 + +RSG+                   I   +++F+ +  +  
Sbjct: 345 LSVSSNVASLNHGKQIHASAIRSGENLSVSVGNALITMYAKAGSITDAQQVFNLIQRNKD 404

Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
             SW +M+ +  Q    +E+I+LF +M   G+KPD  T   +LS+C  +G++E G+    
Sbjct: 405 TVSWTSMIIALGQHGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYF- 463

Query: 429 ASLKTASH-----IDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIA 478
            +L T+ H     + +Y    +I ++ +    + A      +P E D++ W S+++
Sbjct: 464 -NLMTSIHKIEPTLSHYAC--MIDLFGRAGLLQEAFSFIENMPIEPDVIAWGSLLS 516



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 87/186 (46%), Gaps = 5/186 (2%)

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
           V   F  + ++  Y K G +  A   FD +  +++V+W  MI GY Q G  + A++++  
Sbjct: 3   VKTTFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMFVA 62

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           M+   V P   T   +  +C+  G +D+G +I +S  +  G+   +     +++   +AG
Sbjct: 63  MMKDKVLPTQFTVTNVFASCAALGALDIGKKI-HSFVIKLGLSGCVPVANSLLNMYAKAG 121

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
               A+++ D M  +     W +++S   LH +   A  A  +  ++  ++   ++ +  
Sbjct: 122 DSVMAKIVFDRMRLRSISS-WNIMIS---LHMHGGRADLALAQFEQMSERDVVTWNSMIT 177

Query: 717 IYSSLG 722
            YS  G
Sbjct: 178 GYSQHG 183


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 164/490 (33%), Positives = 265/490 (54%), Gaps = 35/490 (7%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +Q+H      G   D   +N L+  YA  GD+ +A  +F  +P R+V+SWN++  GY   
Sbjct: 123 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGY--- 179

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                           +++GD+   R++FD MP  +V++WNAM+
Sbjct: 180 --------------------------------IKNGDLGGARKLFDEMPERNVATWNAMV 207

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           +  +     +E++  F +M+  G+ PD   L  +   CA +  + +G+QVHA  +++   
Sbjct: 208 AGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLD 267

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D  V S L  +Y +C   +  E V   +P L IV  N++IAG + N     A  +F  M
Sbjct: 268 RDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMM 327

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R   +     +F + +SSC+ L++  QG+Q+H Q+ K G    + V + L+ MY +CG +
Sbjct: 328 RSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCL 387

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             + + F    G +T   + MI  Y  +G+G +A+ L+K M+  G +P D+TF+A+L AC
Sbjct: 388 GDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYAC 447

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SHSGL + G++ F  M   +G++P + HYTC++D LGR+G   EAE LI  MP   D VI
Sbjct: 448 SHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVI 507

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W+ LLS+C+   N  +A+R A+ +  LDP +SA Y LL+NI ++  RW D+  VR+ M +
Sbjct: 508 WKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRD 567

Query: 737 NCIVKDPAYS 746
           N + K+P  S
Sbjct: 568 NNVRKEPGVS 577



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 201/412 (48%), Gaps = 24/412 (5%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + LHA    +G   D F  N L+  Y+   +  +A+ LF+++P +++ SWN +     K+
Sbjct: 123 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 182

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            DL  A KLFDEMPERNV +WN +++ L   G +E++L  +  M  EG  P    L SVF
Sbjct: 183 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 242

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           +    L DV  GR+ H  V++ GLD+++ V ++L  +Y +CG  +    V   +   + V
Sbjct: 243 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 302

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           +   +++G  +      ALE F +M    V+ D V+  S +  C        SD+ A + 
Sbjct: 303 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSC--------SDLAALA- 353

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   GQQ+H   +K G +  + +   L+ MY++ G +  +E +F           +
Sbjct: 354 -------QGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 406

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
            MI+ YG      KAIEL ++M + G EP +VT + +L AC  SG  + G + F+ M   
Sbjct: 407 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 466

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               PSV  +  ++    +S    EA  L   M    + PD      +LS+C
Sbjct: 467 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMP---LTPDGVIWKTLLSAC 515



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 120/296 (40%), Gaps = 48/296 (16%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +HA+++R+GL  D  + + L  +Y +C      + +   +P   I S N I++ +
Sbjct: 252 VTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGR 311

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                           +NG  E AL  +  M + G     +T  
Sbjct: 312 -------------------------------TQNGDSEGALEYFCMMRSVGVAADVVTFV 340

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S   + + L  +  G++ HG V+K G+DK + V   L+ +Y++CG    +  VF      
Sbjct: 341 SAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGS 400

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVF 243
           +    +AM+S         +A+E+F+ M+        V+  ++L  C+  G   E  D F
Sbjct: 401 DTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCF 460

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                             +T   G +  +     ++D+  ++G +D AE +  ++P
Sbjct: 461 ----------------ELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMP 500


>gi|222626043|gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japonica Group]
          Length = 628

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 164/490 (33%), Positives = 265/490 (54%), Gaps = 35/490 (7%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +Q+H      G   D   +N L+  YA  GD+ +A  +F  +P R+V+SWN++  GY   
Sbjct: 61  RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGY--- 117

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                           +++GD+   R++FD MP  +V++WNAM+
Sbjct: 118 --------------------------------IKNGDLGGARKLFDEMPERNVATWNAMV 145

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           +  +     +E++  F +M+  G+ PD   L  +   CA +  + +G+QVHA  +++   
Sbjct: 146 AGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLD 205

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D  V S L  +Y +C   +  E V   +P L IV  N++IAG + N     A  +F  M
Sbjct: 206 RDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMM 265

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R   +     +F + +SSC+ L++  QG+Q+H Q+ K G    + V + L+ MY +CG +
Sbjct: 266 RSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCL 325

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             + + F    G +T   + MI  Y  +G+G +A+ L+K M+  G +P D+TF+A+L AC
Sbjct: 326 GDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYAC 385

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SHSGL + G++ F  M   +G++P + HYTC++D LGR+G   EAE LI  MP   D VI
Sbjct: 386 SHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVI 445

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W+ LLS+C+   N  +A+R A+ +  LDP +SA Y LL+NI ++  RW D+  VR+ M +
Sbjct: 446 WKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRD 505

Query: 737 NCIVKDPAYS 746
           N + K+P  S
Sbjct: 506 NNVRKEPGVS 515



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 201/412 (48%), Gaps = 24/412 (5%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + LHA    +G   D F  N L+  Y+   +  +A+ LF+++P +++ SWN +     K+
Sbjct: 61  RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 120

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            DL  A KLFDEMPERNV +WN +++ L   G +E++L  +  M  EG  P    L SVF
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 180

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           +    L DV  GR+ H  V++ GLD+++ V ++L  +Y +CG  +    V   +   + V
Sbjct: 181 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 240

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           +   +++G  +      ALE F +M    V+ D V+  S +  C        SD+ A + 
Sbjct: 241 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSC--------SDLAALA- 291

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   GQQ+H   +K G +  + +   L+ MY++ G +  +E +F           +
Sbjct: 292 -------QGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 344

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
            MI+ YG      KAIEL ++M + G EP +VT + +L AC  SG  + G + F+ M   
Sbjct: 345 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 404

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               PSV  +  ++    +S    EA  L   M    + PD      +LS+C
Sbjct: 405 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMP---LTPDGVIWKTLLSAC 453



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/309 (21%), Positives = 125/309 (40%), Gaps = 49/309 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +HA+++R+GL  D  + + L  +Y +C      + +   +P   I S N I++ +
Sbjct: 190 VTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGR 249

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                           +NG  E AL  +  M + G     +T  
Sbjct: 250 -------------------------------TQNGDSEGALEYFCMMRSVGVAADVVTFV 278

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S   + + L  +  G++ HG V+K G+DK + V   L+ +Y++CG    +  VF      
Sbjct: 279 SAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGS 338

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVF 243
           +    +AM+S         +A+E+F+ M+        V+  ++L  C+  G   E  D F
Sbjct: 339 DTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCF 398

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERS 302
                             +T   G +  +     ++D+  ++G +D AE +  ++P    
Sbjct: 399 ----------------ELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPD 442

Query: 303 VVSWNVMIA 311
            V W  +++
Sbjct: 443 GVIWKTLLS 451


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/572 (31%), Positives = 287/572 (50%), Gaps = 63/572 (11%)

Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
           M+R+  ++ S     +L VC   G               +R +HG  V     K G  AD
Sbjct: 69  MLREGKTVQSAMYVPLLHVCVETG-----------SLGGARALHGHMV-----KTGTSAD 112

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           + ++ SL++ Y + G    A  +F  +PE++VV+W  +I GY    Q  +A+E+   M  
Sbjct: 113 MFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLE 172

Query: 332 CGFEPDEVTSINMLVAC-----------------------------------VRSGDIKT 356
            G  P   T   ML AC                                    +SG +++
Sbjct: 173 AGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLES 232

Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKE-AIKLFREMQFRGVKPDRTTLAIILSSCA 415
               F  +P  +V +W  M+S+ ++ EN+ E  + LF +M   GV P+  TL  ++S C 
Sbjct: 233 AMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCG 292

Query: 416 AMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
               L  GKQV A   K     +  V +  + +Y +    + A R F  + ++ I+ WN+
Sbjct: 293 TRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNA 352

Query: 476 MIAG-----------LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
           MI+G           L   S   +A   F+ ++++ M P  F+F+++LS C+ + +  QG
Sbjct: 353 MISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQG 412

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
            Q+HAQ  K G+++D+ V SAL+ MY KCG I  A + F  M  +  VTW  MI GY+Q+
Sbjct: 413 EQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQH 472

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G   EA++L++DM  +GV+P++ITFV +L+ACS++GL +     F+ M+ ++ +EPI+DH
Sbjct: 473 GRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDH 532

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y CM+D   R G   +A   I     + +  IW  L++ CR H N+ LA  AA+ L  L 
Sbjct: 533 YGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELR 592

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           PK    Y LL N+Y S  RW D+  VR+LM +
Sbjct: 593 PKGIETYVLLLNMYISNERWHDVARVRKLMKQ 624



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 232/525 (44%), Gaps = 100/525 (19%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
             + LH H+++ G   D F+   L+  Y +C  +  A+                      
Sbjct: 96  GARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDAR---------------------- 133

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                     LFD+MPE+NVV+W  LI+    N    +AL V+ +M   G  P+H TL +
Sbjct: 134 ---------SLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGA 184

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A +A  + + G + HG  IK        + N+L  +YAK G  + A+  F  + + N
Sbjct: 185 MLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKN 244

Query: 186 EVTFTAMMSGLAKTDRVVE-ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
            +T+T M+S  A+ +   E  L +F  M+   V  +  +L+SV+ +C             
Sbjct: 245 VITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCG------------ 292

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
               +   N+ G+QV     K+G + ++ + NS + +Y + G+ D A   F  + + S++
Sbjct: 293 ---TRLDLNL-GKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSII 348

Query: 305 SWNVMIAGYGQKYQSTK-----------AIELLQRMKSCGFEPDEVTSINMLVAC----- 348
           +WN MI+GY Q  ++ K           A+++ + +K    +PD  T  ++L  C     
Sbjct: 349 TWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMA 408

Query: 349 ------VRSGDIKTG------------------------REMFDSMPSPSVSSWNAMLSS 378
                 + +  IKTG                         + F  M   ++ +W +M+S 
Sbjct: 409 LEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISG 468

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---VHAASLKTAS 435
           YSQ    +EAI+LF +M+F GV+P+  T   +LS+C+  G+ E  +    +     K   
Sbjct: 469 YSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEP 528

Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
            +D+Y    ++ ++ +  R + A     R   E +   W+S++AG
Sbjct: 529 IVDHY--GCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAG 571



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 153/365 (41%), Gaps = 54/365 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA--- 63
           GK + A   + G   +  + N  + LY +   T  A   F++M    I +WNA++S    
Sbjct: 300 GKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQ 359

Query: 64  --QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
             +   DDL    + F                         +AL V+  +      P   
Sbjct: 360 IMETAKDDLHARSRGF-------------------------QALKVFRNLKRSAMKPDLF 394

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T +S+    ++++ +E G + H   IK G   ++ V +AL+++Y KCG  + A   F EM
Sbjct: 395 TFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEM 454

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
           S    VT+T+M+SG ++  R  EA+++F  M    V  + ++   VL  C+  G      
Sbjct: 455 SIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLA---- 510

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL--- 298
              ++++ F       ++  +    G          ++DM+ + G +D A          
Sbjct: 511 --EKAEHYFDMMKEEYKIEPIVDHYG---------CMVDMFVRLGRLDDAFAFIRRTGFE 559

Query: 299 PERSVVSWNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIK 355
           P  ++  W+ ++AG   +G    +  A + L  ++  G E   V  +NM ++  R  D+ 
Sbjct: 560 PNEAI--WSSLVAGCRSHGNMELAFYAADRLIELRPKGIE-TYVLLLNMYISNERWHDVA 616

Query: 356 TGREM 360
             R++
Sbjct: 617 RVRKL 621


>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 704

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 164/490 (33%), Positives = 265/490 (54%), Gaps = 35/490 (7%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +Q+H      G   D   +N L+  YA  GD+ +A  +F  +P R+V+SWN++  GY   
Sbjct: 127 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGY--- 183

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                           +++GD+   R++FD MP  +V++WNAM+
Sbjct: 184 --------------------------------IKNGDLGGARKLFDEMPERNVATWNAMV 211

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           +  +     +E++  F +M+  G+ PD   L  +   CA +  + +G+QVHA  +++   
Sbjct: 212 AGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLD 271

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D  V S L  +Y +C   +  E V   +P L IV  N++IAG + N     A  +F  M
Sbjct: 272 RDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMM 331

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R   +     +F + +SSC+ L++  QG+Q+H Q+ K G    + V + L+ MY +CG +
Sbjct: 332 RSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCL 391

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             + + F    G +T   + MI  Y  +G+G +A+ L+K M+  G +P D+TF+A+L AC
Sbjct: 392 GDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYAC 451

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SHSGL + G++ F  M   +G++P + HYTC++D LGR+G   EAE LI  MP   D VI
Sbjct: 452 SHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVI 511

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W+ LLS+C+   N  +A+R A+ +  LDP +SA Y LL+NI ++  RW D+  VR+ M +
Sbjct: 512 WKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRD 571

Query: 737 NCIVKDPAYS 746
           N + K+P  S
Sbjct: 572 NNVRKEPGVS 581



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 201/412 (48%), Gaps = 24/412 (5%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + LHA    +G   D F  N L+  Y+   +  +A+ LF+++P +++ SWN +     K+
Sbjct: 127 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 186

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            DL  A KLFDEMPERNV +WN +++ L   G +E++L  +  M  EG  P    L SVF
Sbjct: 187 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 246

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           +    L DV  GR+ H  V++ GLD+++ V ++L  +Y +CG  +    V   +   + V
Sbjct: 247 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 306

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           +   +++G  +      ALE F +M    V+ D V+  S +  C        SD+ A + 
Sbjct: 307 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSC--------SDLAALA- 357

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   GQQ+H   +K G +  + +   L+ MY++ G +  +E +F           +
Sbjct: 358 -------QGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 410

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
            MI+ YG      KAIEL ++M + G EP +VT + +L AC  SG  + G + F+ M   
Sbjct: 411 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 470

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               PSV  +  ++    +S    EA  L   M    + PD      +LS+C
Sbjct: 471 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMP---LTPDGVIWKTLLSAC 519



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/309 (21%), Positives = 125/309 (40%), Gaps = 49/309 (15%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +HA+++R+GL  D  + + L  +Y +C      + +   +P   I S N I++ +
Sbjct: 256 VTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGR 315

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                           +NG  E AL  +  M + G     +T  
Sbjct: 316 -------------------------------TQNGDSEGALEYFCMMRSVGVAADVVTFV 344

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S   + + L  +  G++ HG V+K G+DK + V   L+ +Y++CG    +  VF      
Sbjct: 345 SAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGS 404

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVF 243
           +    +AM+S         +A+E+F+ M+        V+  ++L  C+  G   E  D F
Sbjct: 405 DTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCF 464

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERS 302
                             +T   G +  +     ++D+  ++G +D AE +  ++P    
Sbjct: 465 ----------------ELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPD 508

Query: 303 VVSWNVMIA 311
            V W  +++
Sbjct: 509 GVIWKTLLS 517


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 168/530 (31%), Positives = 284/530 (53%), Gaps = 38/530 (7%)

Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE--RSVVSWNVMIAG 312
           H  Q+H   I   + +   L N+L+++YAK G ++ A ++FS      +++V+W  +I  
Sbjct: 160 HATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITH 219

Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------------- 349
                   +A+ L  +M+  G  P++ T  ++L A                         
Sbjct: 220 LSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDAN 279

Query: 350 ------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE-MQ 396
                       +  D+ +   +FD MP  ++ SWN+M+  +  +  +  A+ +F++ ++
Sbjct: 280 IFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLR 339

Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
            + V P+  +++ +LS+CA MG L  G+QVH   +K       YV + L+ +Y KC+  +
Sbjct: 340 EKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFD 399

Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
              ++F  + + D+V WN ++ G   N    EA  +F  MR+  + P + SF+TVL S A
Sbjct: 400 EGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSA 459

Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
            L++  QG  +H QI K GYV ++ +  +LI MY KCG +  A Q F+ +   N ++W  
Sbjct: 460 SLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTA 519

Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDH 636
           MI  Y  +G  ++ + L++ M++ G++P  +TFV +L+ACSH+G V+ G+  FNSM+  H
Sbjct: 520 MISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH 579

Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA 696
            + P  +HY CM+D LGRAG   EA+  I+ MP K  P +W  LL +CR + N+++ + A
Sbjct: 580 DMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREA 639

Query: 697 AEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           AE LF ++P N   Y LLAN+ +  GR ++   VR LM  N + K+P  S
Sbjct: 640 AERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCS 689



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 203/425 (47%), Gaps = 56/425 (13%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LH+ I ++G   + F+   L+++Y+KC + HSA                        
Sbjct: 264 GQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSA------------------------ 299

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLAS 125
                   ++FD+MPERN+VSWN++I     N L ++A+ V+  +  E   +P  ++++S
Sbjct: 300 -------VRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSS 352

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A   +  +  GR+ HG+V+K GL    YV N+L+ +Y KC +    V +F+ + + +
Sbjct: 353 VLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRD 412

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+  ++ G  + D+  EA   F +M R+ +  D  S S+VL                 
Sbjct: 413 VVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVL----------------H 456

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S    +    G  +H   IKLG+  ++ +  SL+ MYAK G +  A  +F  + + +V+S
Sbjct: 457 SSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVIS 516

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           W  MI+ Y     + + IEL + M S G EP  VT + +L AC  +G ++ G   F+SM 
Sbjct: 517 WTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMK 576

Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                +P    +  M+    ++    EA +    M    +KP  +    +L +C   G L
Sbjct: 577 KIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMP---MKPTPSVWGALLGACRKYGNL 633

Query: 421 ESGKQ 425
           + G++
Sbjct: 634 KMGRE 638



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 203/450 (45%), Gaps = 81/450 (18%)

Query: 10  LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
           +H  I+ N      FL N LI LY+KC   + A  LF    H                  
Sbjct: 164 IHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHH----------------- 206

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
                        + +V+W +LI+ L    +  +ALS++N+M   G  P   T +S+  A
Sbjct: 207 ------------FKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSA 254

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
           S A + V HG++ H L+ K G D NI+V  AL+ +YAKC     AV VF++M E N V++
Sbjct: 255 SAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSW 314

Query: 190 TAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
            +M+ G    +    A+ +F+ ++R K V  + VS+SSVL  CA  G G+          
Sbjct: 315 NSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMG-GLN--------- 364

Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
                  G+QVH + +K G     ++ NSL+DMY K    D    +F  + +R VV+WNV
Sbjct: 365 ------FGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNV 418

Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEV------------------TSIN------- 343
           ++ G+ Q  +  +A      M+  G  PDE                   T+I+       
Sbjct: 419 LVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLG 478

Query: 344 ----------MLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFR 393
                     ++    + G +    ++F+ +   +V SW AM+S+Y       + I+LF 
Sbjct: 479 YVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFE 538

Query: 394 EMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            M   G++P   T   +LS+C+  G +E G
Sbjct: 539 HMLSEGIEPSHVTFVCVLSACSHTGRVEEG 568



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 243/546 (44%), Gaps = 69/546 (12%)

Query: 136 VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE--PNEVTFTAMM 193
           ++H  + H  +I        ++ N L++LYAKCG    A+ +F          VT+T+++
Sbjct: 158 LKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLI 217

Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
           + L+  +  ++AL +F  M       +  + SS+L   A                     
Sbjct: 218 THLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAAT----------------MMV 261

Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
           +HGQQ+H L  K GF+A++ +  +L+DMYAK  DM SA  +F  +PER++VSWN MI G+
Sbjct: 262 LHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGF 321

Query: 314 GQKYQSTKAIELLQR-MKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------- 359
                  +A+ + +  ++     P+EV+  ++L AC   G +  GR+             
Sbjct: 322 FHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPL 381

Query: 360 ----------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
                                 +F  +    V +WN ++  + Q++  +EA   F  M+ 
Sbjct: 382 TYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRR 441

Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
            G+ PD  + + +L S A++  L  G  +H   +K     +  +   LI +Y+KC     
Sbjct: 442 EGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVD 501

Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAK 517
           A +VF  I + +++ W +MI+   L+    +    F+ M    + P+  +F  VLS+C+ 
Sbjct: 502 AYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSH 561

Query: 518 LSSSFQGRQVHAQIEKDGYVNDIFVG----SALIEMYCKCGDIYGARQFFDMMHGKNTVT 573
                +G      ++K   ++D+  G    + ++++  + G +  A++F + M  K T +
Sbjct: 562 TGRVEEGLAHFNSMKK---IHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPS 618

Query: 574 -WNEMI---HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
            W  ++     Y     G EA     +M      P +  +V +   C+ SG ++   E+ 
Sbjct: 619 VWGALLGACRKYGNLKMGREAAERLFEM--EPYNPGN--YVLLANMCTRSGRLEEANEVR 674

Query: 630 NSMQLD 635
             M ++
Sbjct: 675 RLMGVN 680



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 157/359 (43%), Gaps = 56/359 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +++ GL   T++ N L+++Y KC         FD+                  
Sbjct: 366 GRQVHGVVVKYGLVPLTYVMNSLMDMYFKCR-------FFDE------------------ 400

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                   KLF  + +R+VV+WN L+   V+N   E+A + +  M  EG +P   + ++V
Sbjct: 401 ------GVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 454

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             +S +L  +  G   H  +IK+G  KN+ +  +L+++YAKCG    A  VFE + + N 
Sbjct: 455 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNV 514

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           +++TAM+S         + +E+F  M+ + +    V+   VL  C+  G   E      S
Sbjct: 515 ISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNS 574

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS- 305
             K      G + +                 ++D+  + G +D A+    ++P +   S 
Sbjct: 575 MKKIHDMNPGPEHYA---------------CMVDLLGRAGWLDEAKRFIESMPMKPTPSV 619

Query: 306 WNVMIAG---YGQKYQSTKAIELLQRMKSCGFEP-DEVTSINMLVACVRSGDIKTGREM 360
           W  ++     YG      +A E L  M+   + P + V   NM   C RSG ++   E+
Sbjct: 620 WGALLGACRKYGNLKMGREAAERLFEMEP--YNPGNYVLLANM---CTRSGRLEEANEV 673



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 4/173 (2%)

Query: 511 VLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG-- 568
           +L++  +  S     Q+H QI  + Y +  F+ + LI +Y KCG +  A   F + H   
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207

Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
           K  VTW  +I   +      +A+ L+  M  SG  P+  TF +IL+A + + +V  G ++
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267

Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
            +S+   HG +  +   T ++D   +    H A  + D+MP + + V W  ++
Sbjct: 268 -HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP-ERNLVSWNSMI 318



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 19/218 (8%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ-- 64
           G  +H  I++ G   +  +   LI +Y+KC +   A  +F+ +   ++ SW A++SA   
Sbjct: 467 GTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQL 526

Query: 65  --CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-----NEGFV 117
             C +  +E    +  E  E + V++  ++SA    G  E+ L+ +N M      N G  
Sbjct: 527 HGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPG-- 584

Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
           P H             LD    +R    +  + +     V  ALL    K G  K     
Sbjct: 585 PEHYACMVDLLGRAGWLD--EAKR---FIESMPMKPTPSVWGALLGACRKYGNLKMGREA 639

Query: 178 FE---EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
            E   EM   N   +  + +   ++ R+ EA E+ RLM
Sbjct: 640 AERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLM 677


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 173/544 (31%), Positives = 284/544 (52%), Gaps = 39/544 (7%)

Query: 237 GVESDVFAQS-DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
           G+ SD F  S  +  +     +Q+H   + LG +    L   L+   +  GD+  A  +F
Sbjct: 17  GIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76

Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------- 348
            +LP   +  WN +I GY +      A+ +   M+     PD  T  ++L AC       
Sbjct: 77  DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136

Query: 349 -------------------VRSGDIK---------TGREMFDSMPSP--SVSSWNAMLSS 378
                              V++G I          + R +F+ +P P  ++ SW A++S+
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
           Y+Q+    EA+++F  M+   VKPD   L  +L++   +  L+ G+ +HA+ +K    I+
Sbjct: 197 YAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256

Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQ 498
             +   L  +Y+KC +   A+ +F ++   +++ WN+MI+G + N    EA   F +M  
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316

Query: 499 NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
            ++ P   S  + +S+CA++ S  Q R ++  + +  Y +D+F+ SALI+M+ KCG + G
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376

Query: 559 ARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSH 618
           AR  FD    ++ V W+ MI GY  +G   EA+ LY+ M   GV P+D+TF+ +L AC+H
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436

Query: 619 SGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWE 678
           SG+V  G   FN M  DH + P   HY C+ID LGRAGH  +A  +I  MP +    +W 
Sbjct: 437 SGMVREGWWFFNLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWG 495

Query: 679 VLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENC 738
            LLS+C+ H +V L + AA++LF +DP N+  Y  L+N+Y++   WD +  VR  M E  
Sbjct: 496 ALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKG 555

Query: 739 IVKD 742
           + KD
Sbjct: 556 LNKD 559



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 213/422 (50%), Gaps = 52/422 (12%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +HA + R G   D F+ N LI LY+KC    SA+ +F+ +P                
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP---------------- 181

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                        +PER +VSW  ++SA  +NG   +AL +++ M      P  + L SV
Sbjct: 182 -------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSV 228

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
             A T L D++ GR  H  V+K+GL+    +  +L ++YAKCG    A  +F++M  PN 
Sbjct: 229 LNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNL 288

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           + + AM+SG AK     EA++MF  MI K V  D++S++S +  CA+ G   ++      
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA------ 342

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                     + ++    +  +  D+ +S++L+DM+AK G ++ A ++F    +R VV W
Sbjct: 343 ----------RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVW 392

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
           + MI GYG   ++ +AI L + M+  G  P++VT + +L+AC  SG ++ G   F+ M  
Sbjct: 393 SAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMAD 452

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
              +P    +  ++    ++ +  +A ++ + M    V+P  T    +LS+C     +E 
Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---VQPGVTVWGALLSACKKHRHVEL 509

Query: 423 GK 424
           G+
Sbjct: 510 GE 511



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 198/413 (47%), Gaps = 53/413 (12%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           ++ H  ++ +GL  + ++   L+   +  G    A  VF+++  P    + A++ G ++ 
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
           +   +AL M+  M    VS DS +   +L  C+                  S    G+ V
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACS----------------GLSHLQMGRFV 141

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN--LPERSVVSWNVMIAGYGQKY 317
           H    +LGF+AD+ + N L+ +YAK   + SA  +F    LPER++VSW  +++ Y Q  
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201

Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------ 359
           +  +A+E+   M+    +PD V  +++L A     D+K GR                   
Sbjct: 202 EPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261

Query: 360 -----------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
                            +FD M SP++  WNAM+S Y+++   +EAI +F EM  + V+P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321

Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
           D  ++   +S+CA +G LE  + ++    ++    D +++S LI +++KC   E A  VF
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381

Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
            R  + D+V W++MI G  L+    EA   ++ M +  ++P   +F  +L +C
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 183/401 (45%), Gaps = 53/401 (13%)

Query: 60  ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           ++ A     D+ FA ++FD++P   +  WN +I    RN   + AL +Y+ M      P 
Sbjct: 59  LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
             T   + KA + L  ++ GR  H  V ++G D +++V N L++LYAKC     A  VFE
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178

Query: 180 EMSEPNE--VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
            +  P    V++TA++S  A+    +EALE+F  M +  V  D V+L SVL         
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFT----- 233

Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
                    D K      G+ +H   +K+G E +  L  SL  MYAK G + +A+++F  
Sbjct: 234 ------CLQDLK-----QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282

Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           +   +++ WN MI+GY +   + +AI++   M +    PD ++  + + AC + G ++  
Sbjct: 283 MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA 342

Query: 358 REM-----------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
           R M                                   FD      V  W+AM+  Y   
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLH 402

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
              +EAI L+R M+  GV P+  T   +L +C   G++  G
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 172/527 (32%), Positives = 285/527 (54%), Gaps = 36/527 (6%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
           G Q+H   +KLGF +D  L+N+L+DMYAK G +  A  +F  +PER+VVSW  ++ G+  
Sbjct: 23  GVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLH 82

Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---VRSGD------IKTG--------- 357
             ++ + + L   M+  G  P+E T    L AC    R+G       ++TG         
Sbjct: 83  HGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGHDVVAN 142

Query: 358 ---------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR-GVK 401
                          R +FD +PS ++++WN+M+S Y+ +   ++++ +FREMQ R   +
Sbjct: 143 SLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQ 202

Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAA-SLKTASHIDNYVASG-LIGIYSKCQRNELAE 459
           PD  T A +L +C+ +G    G QVHAA +++  S   N + +G L+ +Y KC R  +A 
Sbjct: 203 PDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAM 262

Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
           +VF  +   + + W ++I G +      EA   F++   + +       ++V++  A  +
Sbjct: 263 QVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFA 322

Query: 520 SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
              QG+QVH    K     D+ V ++L++MY KCG    A + F  M  +N V+W  MI+
Sbjct: 323 LVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMIN 382

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G  ++G+G EA+ L+++M A GV+ D++ ++A+L+ACSHSGLVD     F+ +  D  + 
Sbjct: 383 GVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMR 442

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P  +HY CM+D LGRAG   EA+ LI  MP +    +W+ LLS+CR+H +V + +   + 
Sbjct: 443 PKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDV 502

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L  +D  N   Y +L+NI +  G W + + +R  M    + K    S
Sbjct: 503 LLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCS 549



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 237/525 (45%), Gaps = 69/525 (13%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           +A + +AS     +  G + H  ++K+G   +  + N L+ +YAKCG    A  VF+ M 
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
           E N V++TA+M G        E L +F  M     S +  +LS+ L  C   G G  + V
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC---GGGTRAGV 123

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                          Q+H + ++ GFE    ++NSL+ MY+K      A  +F  +P R+
Sbjct: 124 ---------------QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRN 168

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE-PDEVTSINMLVACVRSGDIKTGR--- 358
           + +WN MI+GY    Q   ++ + + M+    E PDE T  ++L AC   G  + G    
Sbjct: 169 LATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVH 228

Query: 359 ----------------------------------EMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                             ++FD +   +   W  ++  ++Q   
Sbjct: 229 AAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQ 288

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
            KEA+ LFR     GV+ D   L+ +++  A   ++E GKQVH  + KT + +D  VA+ 
Sbjct: 289 VKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANS 348

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           L+ +Y KC     A R F  +P  ++V W +MI G+  +    EA   F++M+   +   
Sbjct: 349 LVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEAD 408

Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFF 563
           + ++  +LS+C+      + R+  ++I +D  +       A ++++  + G++  A++  
Sbjct: 409 EVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELI 468

Query: 564 DMMHGKNTV-TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDI 607
             M  + TV  W  ++           A R++KD +A G +  D+
Sbjct: 469 LSMPMEPTVGVWQTLL----------SACRVHKD-VAVGREVGDV 502



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 200/461 (43%), Gaps = 93/461 (20%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
            G  LHA +++ G   DT L N LI++Y+KC   H A  +FD MP +++ SW A      
Sbjct: 22  GGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTA------ 75

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                                    L+   + +G   + L ++ +M   G  P   TL++
Sbjct: 76  -------------------------LMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSA 110

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
             KA         G + HG+ ++ G + +  VAN+L+ +Y+K  WT  A  VF+ +   N
Sbjct: 111 TLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRN 168

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKA-VSIDSVSLSSVLGVCAREGCGVESDVFA 244
             T+ +M+SG A   +  ++L +FR M R+     D  + +S+L  C+  G   E     
Sbjct: 169 LATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAARE----- 223

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFE--ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                      G QVH      G    ++  L+ +LLD+Y K   +  A  +F  L  R+
Sbjct: 224 -----------GAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRN 272

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD------------------------- 337
            + W  +I G+ Q+ Q  +A+ L +R  S G   D                         
Sbjct: 273 AIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHC 332

Query: 338 ---------EVTSINMLV----ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                    +V+  N LV     C  +G+   GR  F  MP+ +V SW AM++   +  +
Sbjct: 333 YTAKTPAGLDVSVANSLVDMYLKCGLTGE--AGRR-FREMPARNVVSWTAMINGVGKHGH 389

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
            +EAI LF EMQ  GV+ D      +LS+C+  G+++  ++
Sbjct: 390 GREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRR 430



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 189/428 (44%), Gaps = 56/428 (13%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           AG  +H   +R G      + N L+ +YSK   T  A+ +FD +P +++ +WN+++S   
Sbjct: 121 AGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYA 180

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
            +     +  +F EM  R+                +E+              P   T AS
Sbjct: 181 HAGQGRDSLLVFREMQRRH----------------DEQ--------------PDEFTFAS 210

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLD--KNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
           + KA + L     G + H  +   G+    N  +A ALL +Y KC     A+ VF+ +  
Sbjct: 211 LLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLER 270

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N + +T ++ G A+  +V EA+ +FR      V  D   LSSV+ V A           
Sbjct: 271 RNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFA----------- 319

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                 F+    G+QVHC T K     D+ ++NSL+DMY K G    A   F  +P R+V
Sbjct: 320 -----DFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNV 374

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF-- 361
           VSW  MI G G+     +AI+L + M++ G E DEV  + +L AC  SG +   R  F  
Sbjct: 375 VSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSR 434

Query: 362 ---DSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
              D    P    +  M+    ++   +EA +L   M    ++P       +LS+C    
Sbjct: 435 ICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMP---MEPTVGVWQTLLSACRVHK 491

Query: 419 ILESGKQV 426
            +  G++V
Sbjct: 492 DVAVGREV 499



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 4/238 (1%)

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
           R  +A +L + A    L  G Q+HAA +K     D  + + LI +Y+KC +  +A  VF 
Sbjct: 4   RRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD 63

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            +PE ++V W +++ G   +    E    F +MR +   P +F+ +  L +C     +  
Sbjct: 64  GMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRA 121

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           G Q+H    + G+     V ++L+ MY K      AR+ FD++  +N  TWN MI GYA 
Sbjct: 122 GVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAH 181

Query: 584 NGYGDEAVRLYKDMIAS-GVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
            G G +++ ++++M      +PD+ TF ++L ACS  G    G ++  +M +  GV P
Sbjct: 182 AGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAV-RGVSP 238


>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 739

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 188/647 (29%), Positives = 327/647 (50%), Gaps = 58/647 (8%)

Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKT 199
           +R H  +I     + + VA+ L++LY++    + A  +     EPN V + +++     +
Sbjct: 68  KRIHASLIVSSGFQPLSVASKLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDS 127

Query: 200 DRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQV 259
                AL  +  M    V+ DS +   +       GC VE               +G+ V
Sbjct: 128 GLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVE---------------YGETV 172

Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
           HC+ +K+GF  D++  N++L++Y K G + +A  +F  +  R +VSW  +I+GY      
Sbjct: 173 HCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESF 232

Query: 320 TKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------------------- 360
           ++  +L  +M+    EP+ VT + ML AC     +  GRE+                   
Sbjct: 233 SRGFKLFNKMR-MEMEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSI 291

Query: 361 -----------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
                            F  +    + SWN +++ YS   +  E  + F EM+ R V   
Sbjct: 292 LRMYTKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMR-REVTSS 350

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
             +L +++S+ A    L  G  +H +++KT  H D  + + L+ +Y+KC   E++ ++F 
Sbjct: 351 IESLTLVVSAIANCANLSEGGMLHCSAIKTGLH-DTVLMTCLLALYAKCGALEISAQLFR 409

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            IP  + + W+SM++G + N    EA   ++QM  + + P     +T++ +   L +   
Sbjct: 410 DIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQL 469

Query: 524 GRQVHAQIEKD----GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIH 579
           G+  HA   ++       +   + ++L+ MY +CG I  A   F+ +  K+ VTW  MI 
Sbjct: 470 GKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIE 529

Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE 639
           G+  +G   EA++ +K M+ S V+P+ +TF+++L+ACSHSGLV  G E+F+SM+    +E
Sbjct: 530 GFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIE 589

Query: 640 PILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE 699
           P L+HYTCM+D LGR+G   EA  +I ++    D  IW  LL++ R+H + +L + AAE+
Sbjct: 590 PDLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAEK 649

Query: 700 LFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           L  L+P N   Y+L +NI +SL RW ++  VR +M E  + K P +S
Sbjct: 650 LLELEPDNVGYYTLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWS 696



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 141/551 (25%), Positives = 251/551 (45%), Gaps = 89/551 (16%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           A K +HA ++ +  F    + ++LI LYS+ N                            
Sbjct: 66  ALKRIHASLIVSSGFQPLSVASKLITLYSQLN---------------------------- 97

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
              D   A+ + +   E N V WN++I + V +GL   AL  Y +M   G      T   
Sbjct: 98  ---DFRSAFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPI 154

Query: 126 VFKASTAL-LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           + +A  +L   VE+G   H + +K+G  +++Y  N +L +Y KCG   +A  +F+EM+  
Sbjct: 155 INQAIWSLGCRVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHR 214

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
           + V++T+++SG    +      ++F  M R  +  +SV++  +L  C+            
Sbjct: 215 DLVSWTSIISGYIYGESFSRGFKLFNKM-RMEMEPNSVTMVVMLQACS------------ 261

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM-DSAEVIFSNLPERSV 303
                F     G+++H   IK GF  D  + NS+L MY K G   +  E  FS + ER +
Sbjct: 262 ----AFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDI 317

Query: 304 VSWNVMIAGYG--------------QKYQSTKAIELLQRMKSC----------------- 332
           +SWN++IA Y                + + T +IE L  + S                  
Sbjct: 318 ISWNILIAFYSFRGDIAEVAERFNEMRREVTSSIESLTLVVSAIANCANLSEGGMLHCSA 377

Query: 333 ---GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
              G   D V    +L    + G ++   ++F  +P  +  +W++M+S ++Q+   KEAI
Sbjct: 378 IKTGLH-DTVLMTCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAI 436

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY----VASGL 445
           +L+++M   G++P+   ++ ++ +   +G L+ GK  HA  ++  S         + + L
Sbjct: 437 ELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFIRNLSSWPEEDSAPLETSL 496

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
           + +Y +C     A   F+R+   D+V W SMI G   + L  EA  FFK M ++E+ P  
Sbjct: 497 LNMYIRCGSISSALICFNRVVVKDVVTWTSMIEGFGTHGLAFEALKFFKSMLESEVQPNS 556

Query: 506 FSFATVLSSCA 516
            +F ++LS+C+
Sbjct: 557 VTFLSLLSACS 567



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 199/464 (42%), Gaps = 98/464 (21%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H   ++ G   D +  N ++E+Y KC +  +A  LFD+M H+D+ SW +I+S    
Sbjct: 169 GETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIY 228

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            +     +KLF++M                             +M  E   P  +T+  +
Sbjct: 229 GESFSRGFKLFNKM-----------------------------RMEME---PNSVTMVVM 256

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV-FEEMSEPN 185
            +A +A   V  GR  H  VIK G   +  V N++L +Y K G +   V   F E+ E +
Sbjct: 257 LQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERD 316

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVESDVFA 244
            +++  +++  +    + E  E F  M R+   SI+S++L     V A   C   S+   
Sbjct: 317 IISWNILIAFYSFRGDIAEVAERFNEMRREVTSSIESLTLV----VSAIANCANLSE--- 369

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G  +HC  IK G   D  L   LL +YAK G ++ +  +F ++P R+ +
Sbjct: 370 -----------GGMLHCSAIKTGLH-DTVLMTCLLALYAKCGALEISAQLFRDIPHRNSI 417

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD--------------------------- 337
           +W+ M++G+ Q     +AIEL Q+M + G +P+                           
Sbjct: 418 TWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATHAFF 477

Query: 338 ---------------EVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
                          E + +NM + C   G I +    F+ +    V +W +M+  +   
Sbjct: 478 IRNLSSWPEEDSAPLETSLLNMYIRC---GSISSALICFNRVVVKDVVTWTSMIEGFGTH 534

Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
               EA+K F+ M    V+P+  T   +LS+C+  G++  G +V
Sbjct: 535 GLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEV 578


>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 205/663 (30%), Positives = 325/663 (49%), Gaps = 85/663 (12%)

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKN---IYVANALLSLYAKCGWTKHAVPVFEEM 181
           S+ +   A   +   +  HG  I  GL  +   I++ + L   YA CG    A  +F+++
Sbjct: 84  SLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDL 143

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSVSLSSVLGVCAREGCGVES 240
           S+P+   + A++          +AL +F  MI       D  +   V+     + C V S
Sbjct: 144 SDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVI-----KACSVMS 198

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
            +          NV G  +H   +  GF +++ + NSLL MY   G +  A  +F+ + +
Sbjct: 199 ML----------NV-GVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLK 247

Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------ 348
           RSVVSWN MI+G+ Q  +  +A+ +   M     EPD  T ++ L +C            
Sbjct: 248 RSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKV 307

Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
                                   R G I     +F       V +W +M++ Y  + N 
Sbjct: 308 HKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNA 367

Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
           K A+ L   MQ  GV P+  TLA +LS+CA+                            L
Sbjct: 368 KSALALCPAMQLDGVVPNAVTLASLLSACAS----------------------------L 399

Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
             +Y+KC     + +VF +  +   V WN++++GL  N L  EA   FK M   E+    
Sbjct: 400 CYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANH 459

Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
            +F +V+ + A L+   Q   +H+ + + G+++ I V + LI+MY KCG +  A + FD 
Sbjct: 460 ATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDE 519

Query: 566 MHGK--NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVD 623
           +  K  + + W+ +I GY  +G+G+ AV L+  M+ SG++P++ITF ++L ACSH GLVD
Sbjct: 520 IPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVD 579

Query: 624 VGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            G+ +F  M  ++   P+ +HYTC++D LGRAG   EA  LI  MP + +  IW  LL +
Sbjct: 580 DGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGA 639

Query: 684 CRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDP 743
           C +H NV L + AAE LF L+P+++  Y LLANIY+++GRW D   VR +MS+  + K P
Sbjct: 640 CLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTP 699

Query: 744 AYS 746
           A S
Sbjct: 700 AQS 702



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 238/519 (45%), Gaps = 54/519 (10%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           K+LH H + +GL                 N  H   HL             A+  A C  
Sbjct: 99  KILHGHTITSGLLHSP-------------NFIHLPSHL-------------AVSYAFCGC 132

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEG-FVPTHITLASV 126
             +  A KLFD++ + ++  WN +I   V  G    AL V++ M   G F P   T   V
Sbjct: 133 --VPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLV 190

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA + +  +  G   HG  +  G   N++V N+LL++Y  CG    A  VF  M + + 
Sbjct: 191 IKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSV 250

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++  M+SG  +  R  EAL +F  M+   V  DS ++ S L  C   G   E ++    
Sbjct: 251 VSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSC---GYLKELEL---- 303

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G +VH L  K   +  + + N+L+DMY++ G +D A ++F+   E+ V++W
Sbjct: 304 ---------GIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITW 354

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------VRSGDIKTGRE 359
             MI GY     +  A+ L   M+  G  P+ VT  ++L AC        +   +    +
Sbjct: 355 TSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCYMYAKCNAVSYSFQ 414

Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
           +F          WNA+LS    +E  +EA+ LF+ M    V+ +  T   ++ + A +  
Sbjct: 415 VFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILAD 474

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP--ELDIVCWNSMI 477
           L+    +H+  +++       V +GLI +YSKC   + A ++F  IP  E DI+ W+ +I
Sbjct: 475 LKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLI 534

Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
           AG  ++     A + F QM  + M P + +F +VL +C+
Sbjct: 535 AGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACS 573



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/273 (21%), Positives = 119/273 (43%), Gaps = 44/273 (16%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS---- 62
           G  +H  + +N L +   + N L+++YS+C     A  +F +   KD+ +W ++++    
Sbjct: 304 GIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIM 363

Query: 63  --------AQC------------------------------KSDDLEFAYKLFDEMPERN 84
                   A C                              K + + +++++F +  ++ 
Sbjct: 364 NGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCYMYAKCNAVSYSFQVFAKTSKKR 423

Query: 85  VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
            V WN L+S L+ N L  +A+ ++  M  E     H T  SV  A   L D++     H 
Sbjct: 424 TVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHS 483

Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM--SEPNEVTFTAMMSGLAKTDRV 202
            +++ G    I V   L+ +Y+KCG   +A  +F+E+   E + + ++ +++G       
Sbjct: 484 YLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHG 543

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
             A+ +F  M+   +  + ++ +SVL  C+  G
Sbjct: 544 ETAVLLFNQMVHSGMQPNEITFTSVLHACSHRG 576


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 206/742 (27%), Positives = 344/742 (46%), Gaps = 126/742 (16%)

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVR-NGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D E A K+F     RN + WN+ I       G   + L+V+ ++ ++G       L  V 
Sbjct: 79  DFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVL 138

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K   AL+++  G   H  ++K G   +++++ AL++LY K      A  VF+E     + 
Sbjct: 139 KICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDF 198

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            +  ++    ++++  +ALE+FR M   +      ++  +L  C                
Sbjct: 199 LWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACG--------------- 243

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
            K      G+Q+H   I+ G  ++  + NS++ MY++N  ++ A V F +  + +  SWN
Sbjct: 244 -KLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWN 302

Query: 308 VMIAGYGQKYQSTKAIELLQRM-----------------------------------KSC 332
            +I+ Y        A +LLQ M                                   +S 
Sbjct: 303 SIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSA 362

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREM-------------------------------- 360
           GF+PD  +  + L A +  G    G+E+                                
Sbjct: 363 GFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKA 422

Query: 361 ---FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
              F    + ++ +WN+++S Y+       A KL  +M+  G+KPD  T           
Sbjct: 423 EVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTW---------- 472

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL----DIVCW 473
                                N + SG    YS   R+E A  V +RI  L    ++V W
Sbjct: 473 ---------------------NSLVSG----YSMSGRSEEALAVINRIKSLGLTPNVVSW 507

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
            +MI+G   N   ++A  FF QM++  + P   +  T+L +CA  S    G ++H    +
Sbjct: 508 TAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMR 567

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G+++DI++ +ALI+MY K G +  A + F  +  K    WN M+ GYA  G+G+E   L
Sbjct: 568 HGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTL 627

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           + +M  +GV+PD ITF A+L+ C +SGLV  G + F+SM+ D+ + P ++HY+CM+D LG
Sbjct: 628 FDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLG 687

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           +AG   EA   I  +P K D  IW  +L++CRLH ++++A+ AA  L RL+P NSA Y+L
Sbjct: 688 KAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLLRLEPYNSANYAL 747

Query: 714 LANIYSSLGRWDDLRAVRELMS 735
           + NIYS+  RW D+  ++E M+
Sbjct: 748 MMNIYSTFDRWGDVERLKESMT 769



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 263/537 (48%), Gaps = 29/537 (5%)

Query: 51  HKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNK 110
           H D++   A+++   K   ++ A ++FDE P +    WN ++ A +R+   E AL ++ +
Sbjct: 163 HVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRR 222

Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
           M +     T  T+  + +A   L  +  G++ HG VI+ G   N  + N+++S+Y++   
Sbjct: 223 MQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNR 282

Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
            + A   F+   + N  ++ +++S  A  D +  A ++ + M    V  D ++ +S+L  
Sbjct: 283 LELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSG 342

Query: 231 CAREGC---------GVESDVFAQSDNKFSRNVH----------GQQVHCLTIKLGFEAD 271
              +G           ++S  F       +  +           G+++H   ++   E D
Sbjct: 343 HLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYD 402

Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
           +++  SL+D Y KN  +D AEV+F +   +++ +WN +I+GY  K     A +LL +MK 
Sbjct: 403 VYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKE 462

Query: 332 CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS----PSVSSWNAMLSSYSQSENHKE 387
            G +PD VT  +++     SG  +    + + + S    P+V SW AM+S   Q+EN+ +
Sbjct: 463 EGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMD 522

Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
           A++ F +MQ   VKP+ TT+  +L +CA   +L+ G+++H  S++     D Y+A+ LI 
Sbjct: 523 ALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALID 582

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y K  + ++A  VF  I E  + CWN M+ G ++     E F  F +MR+  + P   +
Sbjct: 583 MYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAIT 642

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           F  +LS C        G +    ++ D  +N        IE Y    D+ G   F D
Sbjct: 643 FTALLSGCKNSGLVMDGWKYFDSMKTDYNIN------PTIEHYSCMVDLLGKAGFLD 693



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 215/474 (45%), Gaps = 72/474 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +++R G   +T +CN ++ +YS+ N    A+  FD     +  SWN+I+S+   
Sbjct: 251 GKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAV 310

Query: 67  SDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
           +D L  A+ L  EM     + ++++WN+L+S  +  G  E  L+ +  + + GF P   +
Sbjct: 311 NDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCS 370

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK--------------- 167
           + S  +A   L     G+  HG +++  L+ ++YV  +L+  Y K               
Sbjct: 371 ITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTK 430

Query: 168 ----CGWTK------------HAVPVFEEMSE----PNEVTFTAMMSGLAKTDRVVEALE 207
               C W              +A  +  +M E    P+ VT+ +++SG + + R  EAL 
Sbjct: 431 NKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALA 490

Query: 208 MFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVESDVFAQSDNKFSRNVH----------- 255
           +   +    ++ + VS ++++ G C  E        F+Q   +   NV            
Sbjct: 491 VINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEE---NVKPNSTTICTLLR 547

Query: 256 ----------GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
                     G+++HC +++ GF  D++++ +L+DMY K G +  A  +F N+ E+++  
Sbjct: 548 ACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPC 607

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
           WN M+ GY       +   L   M+  G  PD +T   +L  C  SG +  G + FDSM 
Sbjct: 608 WNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMK 667

Query: 366 S-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +     P++  ++ M+    ++    EA+     +     K D +    +L++C
Sbjct: 668 TDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVP---QKADASIWGAVLAAC 718



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 14/183 (7%)

Query: 525 RQVHAQIEK-DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           R++HAQI K     N + +  +++  Y + GD   A + F +   +N + WN  I  +A 
Sbjct: 48  RELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEEFAS 107

Query: 584 NGYGD--EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
            G GD  E + ++K++   GVK D      +L  C     + +G+E+   + +  G   +
Sbjct: 108 FG-GDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACL-VKRGFH-V 164

Query: 642 LDHYTC-MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK-RAAEE 699
             H +C +I+   +      A  + DE P ++D  +W  ++      AN+R  K   A E
Sbjct: 165 DVHLSCALINLYEKYLGIDGANQVFDETPLQED-FLWNTIVM-----ANLRSEKWEDALE 218

Query: 700 LFR 702
           LFR
Sbjct: 219 LFR 221


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 194/642 (30%), Positives = 331/642 (51%), Gaps = 62/642 (9%)

Query: 146 VIKIGLDKNIYVANALLSLYAKCGWT---KHAVPVFEEMSEPNEVTF-TAMMSGLAKTDR 201
            I  GL  + Y A+ L++  +         +++ +F  +  PN  T+ T M + L   + 
Sbjct: 26  TILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAHLYLQNS 85

Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
             +AL  ++L +      DS +   +L  CA      E                G+Q+H 
Sbjct: 86  PHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFE----------------GRQLHA 129

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
             +  GF+ D+++ N+L+++YA  G + SA  +F   P   +VSWN ++AGY Q  +  +
Sbjct: 130 HAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEE 189

Query: 322 AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPS--VSSWNAMLSSY 379
           A  + + M     E + + S +M+    R G ++  R +F+ +      + SW+AM+S Y
Sbjct: 190 AERVFEGMP----ERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCY 245

Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
            Q+E  +EA+ LF EM+  GV  D   +   LS+C+ +  +E G+ VH  ++K    +++
Sbjct: 246 EQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVG--VED 303

Query: 440 YVA--SGLIGIYSKCQR-----------NEL---------------------AERVFHRI 465
           YV+  + LI +YS C              EL                     AE +F+ +
Sbjct: 304 YVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSM 363

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
           PE D+V W++MI+G + +    EA   F++M+ + + P + +  + +S+C  L++   G+
Sbjct: 364 PEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGK 423

Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
            +HA I ++    ++ + + LI+MY KCG +  A + F  M  K   TWN +I G A NG
Sbjct: 424 WIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNG 483

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
             ++++ ++ DM  +G  P++ITF+ +L AC H GLV+ G   FNSM  +H +E  + HY
Sbjct: 484 SVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHY 543

Query: 646 TCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP 705
            CM+D LGRAG   EAE LID MP   D   W  LL +CR H +  + +R   +L +L P
Sbjct: 544 GCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQP 603

Query: 706 KNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
            +   + LL+NIY+S G W ++  +R +M+++ +VK P  S+
Sbjct: 604 DHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSM 645



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 217/478 (45%), Gaps = 89/478 (18%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ LHAH + +G   D ++ N L+ LY+ C +  SA+ +F++ P  D+ SWN +L+   +
Sbjct: 124 GRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQ 183

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYN----------------- 109
           + ++E A ++F+ MPERN ++ N++I+   R G  EKA  ++N                 
Sbjct: 184 AGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVS 243

Query: 110 ----------------KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDK 153
                           +M   G     + + S   A + +L+VE GR  HGL +K+G++ 
Sbjct: 244 CYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVED 303

Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEE--------------------------------M 181
            + + NAL+ LY+ CG    A  +F++                                M
Sbjct: 304 YVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSM 363

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
            E + V+++AM+SG A+ +   EAL +F+ M    V  D  +L S +  C          
Sbjct: 364 PEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTH-------- 415

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
             A  D        G+ +H    +   + ++ LS +L+DMY K G +++A  +F  + E+
Sbjct: 416 -LATLD-------LGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEK 467

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
            V +WN +I G        +++ +   MK  G  P+E+T + +L AC   G +  GR  F
Sbjct: 468 GVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYF 527

Query: 362 DSM-----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           +SM        ++  +  M+    ++   KEA +L   M    + PD  T   +L +C
Sbjct: 528 NSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMP---MAPDVATWGALLGAC 582



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 161/333 (48%), Gaps = 19/333 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHK-DIYSWNAILSAQC 65
           G+ +H   ++ G+ D   L N LI LYS C     A+ +FD      D+ SWN+++S   
Sbjct: 289 GRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYL 348

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           +   ++ A  LF  MPE++VVSW+ +IS   ++    +AL+++ +M   G  P    L S
Sbjct: 349 RCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVS 408

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
              A T L  ++ G+  H  + +  L  N+ ++  L+ +Y KCG  ++A+ VF  M E  
Sbjct: 409 AISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKG 468

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
             T+ A++ GLA    V ++L MF  M +     + ++   VLG C   G      +   
Sbjct: 469 VSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMG------LVND 522

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVV 304
             + F+  +H  ++         EA++     ++D+  + G +  AE +  ++P    V 
Sbjct: 523 GRHYFNSMIHEHKI---------EANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVA 573

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           +W  ++ G  +K++  +  E L R K    +PD
Sbjct: 574 TWGALL-GACRKHRDNEMGERLGR-KLIQLQPD 604



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 110/534 (20%), Positives = 218/534 (40%), Gaps = 130/534 (24%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISA-LVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
             ++ ++F+ +   N  +WN ++ A L       +AL  Y         P   T   + +
Sbjct: 54  FHYSLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQ 113

Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
              A +    GR+ H   +  G D ++YV N L++LYA CG    A  VFEE    + V+
Sbjct: 114 CCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVS 173

Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC------------ 236
           +  +++G  +   V EA  +F  M  +    ++++ +S++ +  R+GC            
Sbjct: 174 WNTLLAGYVQAGEVEEAERVFEGMPER----NTIASNSMIALFGRKGCVEKARRIFNGVR 229

Query: 237 GVESDVFAQSD--NKFSRNVHGQQ------------------------------------ 258
           G E D+ + S   + + +N  G++                                    
Sbjct: 230 GRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMG 289

Query: 259 --VHCLTIKLGFEADLHLSNSLLDMYA--------------------------------K 284
             VH L +K+G E  + L N+L+ +Y+                                +
Sbjct: 290 RWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLR 349

Query: 285 NGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM 344
            G +  AE++F ++PE+ VVSW+ MI+GY Q    ++A+ L Q M+  G  PDE   ++ 
Sbjct: 350 CGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSA 409

Query: 345 LVAC-----------------------------------VRSGDIKTGREMFDSMPSPSV 369
           + AC                                   ++ G ++   E+F +M    V
Sbjct: 410 ISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGV 469

Query: 370 SSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAA 429
           S+WNA++   + + + ++++ +F +M+  G  P+  T   +L +C  MG++  G+    +
Sbjct: 470 STWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNS 529

Query: 430 SL---KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
            +   K  ++I +Y    ++ +  +    + AE +   +P   D+  W +++  
Sbjct: 530 MIHEHKIEANIKHY--GCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGA 581


>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/622 (29%), Positives = 313/622 (50%), Gaps = 61/622 (9%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           L S+ + +T+L  +    + H   +  GL    ++   L+ L++      +A  V ++  
Sbjct: 2   LLSLLRTATSLTQIH---QIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTP 54

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
            P + ++ +++           +L ++  M+R +    + +   VL  C+  G  +E   
Sbjct: 55  SPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLE--- 111

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                        G+Q+H   ++LGF +DL + NSL+DMY K   +DSA   + ++  R 
Sbjct: 112 -------------GEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRD 158

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
            VSWN +I+GY                                   V+ G ++  R++F+
Sbjct: 159 EVSWNSIISGY-----------------------------------VQWGQVEKARDLFE 183

Query: 363 SMP-SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG--VKPDRTTLAIILSSCAAMGI 419
            MP   +V  W AM++ Y +  +  E + LFR+M      V+P+  T+  +LS+C+ +  
Sbjct: 184 EMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCN 243

Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
            E G+ +          ++  + + LI +YSKC   E A R+F  +   ++  WN++I G
Sbjct: 244 YEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITG 303

Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
                L  EA   ++ M+   + P + +   VLS+CA L +   GR+VH  + ++G   +
Sbjct: 304 CVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLN 363

Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
           + + +AL++MY KCG I  A   F     K+   WN MI G A +G G +++ ++  M+ 
Sbjct: 364 VILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVR 423

Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
           +GV+P+D+TF+ +L+AC+HSGLV+ G   F+SM   HG+ P L+HY CM+D LGRAGH  
Sbjct: 424 AGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLK 483

Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
           EA  L+  M    D +IW  LLS+CR+H N+ LA + +E +      N     LL+NIY+
Sbjct: 484 EAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFCILLSNIYA 543

Query: 720 SLGRWDDLRAVRELMSENCIVK 741
           S GRW D+  VR  + E  I K
Sbjct: 544 SSGRWKDVARVRRQVKEKRIKK 565



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 215/416 (51%), Gaps = 27/416 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H H+LR G   D F+CN LI++Y KC    SA++ +D M  +D  SWN+I+S   +
Sbjct: 112 GEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQ 171

Query: 67  SDDLEFAYKLFDEMP-ERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITL 123
              +E A  LF+EMP  RNVV W  +I+   + G   + LS++ +M  S +   P   T+
Sbjct: 172 WGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATM 231

Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
             +  A + L + E GR     +    +  N  +  AL+ +Y+KCG  + A  +F+ +S 
Sbjct: 232 VCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSC 291

Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
            N  ++ A+++G  +   + EA++++R M  ++V  + ++L +VL  CA  G  +E    
Sbjct: 292 KNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLG-ALEL--- 347

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
                       G++VH    + G + ++ L+ +L+DMYAK G +D A +IF    E+ V
Sbjct: 348 ------------GREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDV 395

Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
             WN MI G         ++ +  +M   G +P++VT I +L AC  SG ++ GR  F S
Sbjct: 396 ALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSS 455

Query: 364 MP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
           M      SP +  +  M+    ++ + KEA +L + M    + PD      +LS+C
Sbjct: 456 MADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNML---IPPDSIIWGALLSAC 508



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 187/422 (44%), Gaps = 81/422 (19%)

Query: 70  LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
           +++A  + D+ P     SWN+LI A   +G  + +L +Y KM      P++ T   V KA
Sbjct: 43  IDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKA 102

Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC--------------------- 168
            + L  V  G + H  V+++G   +++V N+L+ +Y KC                     
Sbjct: 103 CSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSW 162

Query: 169 ----------GWTKHAVPVFEEMS-EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
                     G  + A  +FEEM    N V +TAM++G  K    VE L +FR M+   V
Sbjct: 163 NSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQML---V 219

Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
           S D V  ++   VC    C    +   +     S  +   ++   TI         L  +
Sbjct: 220 SADEVQPNAATMVCLLSACSTLCNY--EVGRFLSVFIDVNKIPLNTI---------LVTA 268

Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
           L+DMY+K GD++ A  IF  +  +++ SWN +I G  Q     +AI+L + MK+   +P+
Sbjct: 269 LIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPN 328

Query: 338 EVTSINMLVACVRSGDIKTGRE-----------------------------------MFD 362
           E+T +N+L AC   G ++ GRE                                   +F 
Sbjct: 329 EITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFV 388

Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
                 V+ WNAM+   +   + ++++ +F +M   GV+P+  T   +LS+C   G++E 
Sbjct: 389 KTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEE 448

Query: 423 GK 424
           G+
Sbjct: 449 GR 450


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 203/666 (30%), Positives = 329/666 (49%), Gaps = 68/666 (10%)

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           LA +   ST+L   E GR+ H  VI+ G   +++++N LL +YA+   ++ A  + + M 
Sbjct: 18  LARLVDESTSL---EQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMP 74

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             N +++ A++   A+      +L  F+ M++     D+V   S++              
Sbjct: 75  RRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLI-------------- 120

Query: 243 FAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
                 K  R +  G+ V     K GF+    +  +L+ MY + G +D A+  F  + ER
Sbjct: 121 ------KAPRTIQEGEIVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQER 174

Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI-----------------NM 344
            VVSWN +I  Y +  +  +++ + + M   G  P+ VT I                 N+
Sbjct: 175 GVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNL 234

Query: 345 LVACV--------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
           + +C                     R G+I    ++F+ M    V SWN M+S+++Q+ +
Sbjct: 235 IHSCSIDSGLISVTTVANSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGH 294

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
              A+ L+  M  R   PD  T   +L +C     LE G+ +H          D  VA+ 
Sbjct: 295 SSGALDLYGRMTIR---PDGVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATA 351

Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
           L+ +Y +C R + A  VF  I    ++  N++IA  +       + + F+QM Q  + P+
Sbjct: 352 LVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPS 411

Query: 505 QFSFATVLSSCAKLSSSFQG-RQVH---AQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
           +F+   VL +CA   ++    R +H   A+   D   +DI V +AL+ MY KCGD+  AR
Sbjct: 412 KFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAAR 471

Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
             FD     N  TWN ++ GYAQ+GY + AVRL  +M  +G+ PD I+F A L+A SH+ 
Sbjct: 472 GIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHAR 531

Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
            V+ G  IF ++  D+G+ P ++HY  ++D LGRAG   EAE  +  M    D   W  L
Sbjct: 532 QVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMAL 591

Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
           L +CR+H +   A RAAE +  +DP + A Y++L+N+YS+ GRWD+   +R  MSEN   
Sbjct: 592 LGACRIHKDQDRAMRAAEAIVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMSENGAR 651

Query: 741 KDPAYS 746
           K+P  S
Sbjct: 652 KEPGRS 657



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 131/600 (21%), Positives = 263/600 (43%), Gaps = 91/600 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  ++ +G  D  FL N L+ +Y++  ++  A+ L D+M                 
Sbjct: 31  GRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRM----------------- 73

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
                         P RN +SWN +I A  + G   ++L  + +M  +G +P  +   S+
Sbjct: 74  --------------PRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSL 119

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            KA      ++ G        K G D++  V  AL+ +Y +CG    A   F+ + E   
Sbjct: 120 IKAPRT---IQEGEIVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGV 176

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
           V++ A+++  ++ D   ++L +FR M+ + ++ ++V++  +    A    G+ + +    
Sbjct: 177 VSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVA----GIAAKI---- 228

Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
                    G  +H  +I  G  +   ++NS+++++ + G++  A  IF  +  R V SW
Sbjct: 229 ------TTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGNITRANDIFEKMDRRDVCSW 282

Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------------ 348
           N MI+ + Q   S+ A++L  RM      PD VT +N+L AC                  
Sbjct: 283 NTMISAFAQNGHSSGALDLYGRMT---IRPDGVTFVNVLEACDCPDDLERGESIHRDVRA 339

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             R G +    E+F ++  P V + NA++++++Q      ++  
Sbjct: 340 HGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLH 399

Query: 392 FREMQFRGVKPDRTTL-AIILSSCAAMGILESGKQVHAASLKTASHIDNY---VASGLIG 447
           FR+M   G++P + TL A++ +   +     +G+ +H    +     D +   V + L+ 
Sbjct: 400 FRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVN 459

Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
           +Y+KC   + A  +F   P+ ++  WN+++AG + +     A     +M+   + P   S
Sbjct: 460 MYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPIS 519

Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
           F   LS+ +       G ++   I +D G +  +    A++++  + G +  A  F   M
Sbjct: 520 FTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSM 579



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 204/477 (42%), Gaps = 67/477 (14%)

Query: 2   KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
           K    G L+H+  + +GL   T + N +I L+ +  N   A  +F+K             
Sbjct: 227 KITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGNITRANDIFEK------------- 273

Query: 62  SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                             M  R+V SWN +ISA  +NG    AL +Y +M+     P  +
Sbjct: 274 ------------------MDRRDVCSWNTMISAFAQNGHSSGALDLYGRMT---IRPDGV 312

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T  +V +A     D+E G   H  V   G D ++ VA AL+S+Y +CG    A  VF  +
Sbjct: 313 TFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAI 372

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
             P  +T  A+++  A+  R   +L  FR M++  +     +L +VL           + 
Sbjct: 373 QHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVL----------GAC 422

Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLH---LSNSLLDMYAKNGDMDSAEVIFSNL 298
             + +     R++H     C       + D H   + N+L++MYAK GD+D+A  IF   
Sbjct: 423 ATSGAAASAGRDLHRWMAECPG-----DCDPHDILVRNALVNMYAKCGDLDAARGIFDAA 477

Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
           P+ +V +WN ++AGY Q   +  A+ LL  M+  G  PD ++    L A   +  ++ G 
Sbjct: 478 PQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGA 537

Query: 359 EMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
            +F ++       PSV  + A++    ++   +EA    R M           L   L +
Sbjct: 538 RIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMAL---LGA 594

Query: 414 CAAMGILESGKQVHAASLKTA---SHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
           C      +  + + AA    A   SH  +Y    L  +YS   R + AE +  R+ E
Sbjct: 595 CRIHK--DQDRAMRAAEAIVAIDPSHGASYTV--LSNVYSAAGRWDEAEEIRRRMSE 647



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 170/372 (45%), Gaps = 10/372 (2%)

Query: 293 VIFSNLPERSVV-SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
           +I S LP  + V SW  +     +     +  ++ +R+   G+      S ++L    R 
Sbjct: 1   MILSVLPPAAPVDSWRDLARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARL 60

Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
              +    + D MP  +  SWNA++ + +Q+ +   ++  F+ M   G  PD     + L
Sbjct: 61  ESSRDAELLLDRMPRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPD---AVVFL 117

Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
           S   A   ++ G+ V   + K+       V + LIG+Y +C R + A+  F RI E  +V
Sbjct: 118 SLIKAPRTIQEGEIVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVV 177

Query: 472 CWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ--GRQVHA 529
            WN++I   S      ++   F++M    + P   +   + S+ A +++     G  +H+
Sbjct: 178 SWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHS 237

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
                G ++   V +++I ++ + G+I  A   F+ M  ++  +WN MI  +AQNG+   
Sbjct: 238 CSIDSGLISVTTVANSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSG 297

Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
           A+ LY  M    ++PD +TFV +L AC     ++ G  I   ++  HG +  L   T ++
Sbjct: 298 ALDLYGRMT---IRPDGVTFVNVLEACDCPDDLERGESIHRDVRA-HGYDSDLIVATALV 353

Query: 650 DCLGRAGHFHEA 661
               R G    A
Sbjct: 354 SMYRRCGRLDRA 365


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 178/523 (34%), Positives = 279/523 (53%), Gaps = 20/523 (3%)

Query: 243 FAQSDNKFSRNVHGQQVHCLTI--KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL-- 298
           F    N FS        +  T+  K     D++  NSL+   A+ GD   +   FS +  
Sbjct: 16  FKIHKNHFSTTAAATNTNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRK 75

Query: 299 ----PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
               P RS  ++   I      +      +  Q+    GFE D   S  ++    + G +
Sbjct: 76  LDIKPNRS--TFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKL 133

Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR---------GVKPDRT 405
              R +FD +P  ++ +W ++++ Y Q+++  EA+ +F+E  F          G   D  
Sbjct: 134 SNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSV 193

Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
            +  +LS+C+ +      + VH  ++K        V + L+  Y+KC    L+ +VF  +
Sbjct: 194 AMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDM 253

Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQG 524
            E D+V WNSMIA  + N L  +AF  F  M +       + + +T+L +CA   +   G
Sbjct: 254 AEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVG 313

Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
             +H Q+ K GYVN++ + +++I+MYCKCG    AR  FD M  KN  +W  MI GY  +
Sbjct: 314 MCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMH 373

Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
           G+  EA+ ++  MI +GVKP+ ITF+++L ACSH+G ++ G   FN+M  ++ VEP ++H
Sbjct: 374 GFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEH 433

Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
           Y CM+D LGRAG+  EA  LI  M  + D V+W  LL++CR+H +V LA+ +A ELF+LD
Sbjct: 434 YGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLD 493

Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYSL 747
           P N   Y LLANIY+  GRW D+  +R L+ +  +VK P YSL
Sbjct: 494 PSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSL 536



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 199/394 (50%), Gaps = 62/394 (15%)

Query: 76  LFDEMPER-NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALL 134
           LF++  +R +V SWN+LI+ L R G   ++L  ++ M      P   T     K+ +AL 
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
           D+  G++ H   +  G + +++V++AL+ +Y+KCG   +A  +F+E+   N VT+T++++
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 195 GLAKTDRVVEALEMFR-LMIRKA--------VSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
           G  + D   EAL +F+  +  K+         S+DSV++ SVL  C+R            
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSR-----------V 205

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
           S+   S  VHG     + IK+G +  + + N+LLD YAK G++  +  +F ++ E+ VVS
Sbjct: 206 SNKAVSEGVHG-----VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVS 260

Query: 306 WNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRSGDIKTG------- 357
           WN MIA Y Q   ST A E+   M K+ G + +EVT   +L+AC   G ++ G       
Sbjct: 261 WNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQV 320

Query: 358 ----------------------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
                                       R  FD M   +V SW AM++ Y      +EA+
Sbjct: 321 IKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREAL 380

Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
            +F +M + GVKP+  T   +L++C+  G LE G
Sbjct: 381 DVFYQMIWAGVKPNYITFISVLAACSHAGFLEEG 414



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 206/415 (49%), Gaps = 47/415 (11%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
           +GK  H   L  G   D F+ + LI++YSKC    +A+ LFD++P ++I +W ++++   
Sbjct: 100 SGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYV 159

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
           ++DD   A  +F E           L      NG EE   SV             + + S
Sbjct: 160 QNDDAHEALMVFKEF----------LFEKSEGNG-EEVGTSV-----------DSVAMIS 197

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           V  A + + +       HG+ IK+GLDK + V N LL  YAKCG    +  VF++M+E +
Sbjct: 198 VLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKD 257

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVS-IDSVSLSSVLGVCAREGCGVESDVFA 244
            V++ +M++  A+     +A E+F  M++      + V+LS++L  CA EG         
Sbjct: 258 VVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEG--------- 308

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                 +  V G  +H   IK+G+  ++ ++ S++DMY K G  + A   F  + E++V 
Sbjct: 309 ------ALRV-GMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVR 361

Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
           SW  MIAGYG    + +A+++  +M   G +P+ +T I++L AC  +G ++ G   F++M
Sbjct: 362 SWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAM 421

Query: 365 P-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
                  P V  +  M+    ++   KEA  L + M+   V+ D      +L++C
Sbjct: 422 SHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMK---VRRDFVLWGSLLAAC 473


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 204/742 (27%), Positives = 342/742 (46%), Gaps = 126/742 (16%)

Query: 69  DLEFAYKLFDEMPERNVVSWNNLISALVR-NGLEEKALSVYNKMSNEGFVPTHITLASVF 127
           D E A K+F     RN + WN+ +       G   + L V+ ++ ++G       L  V 
Sbjct: 79  DFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVL 138

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           K   AL+++  G   H  ++K G   +++++ AL++LY KC     A  VF+E     + 
Sbjct: 139 KICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDF 198

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
            +  ++    +++R  +ALE+ R M   +      ++  +L  C                
Sbjct: 199 LWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACG--------------- 243

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
            K      G+Q+H   I+ G  ++  + NS++ MY++N  ++ A  +F +  + ++ SWN
Sbjct: 244 -KLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWN 302

Query: 308 VMIAGYGQKYQSTKAIELLQRM-----------------------------------KSC 332
            +I+ Y        A +L + M                                   +S 
Sbjct: 303 SIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSA 362

Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREM-------------------------------- 360
           GF+PD  +  + L A +  G    G+E+                                
Sbjct: 363 GFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKA 422

Query: 361 ---FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
              F    + ++ +WN+++S Y+       A KL  +M+  G+K D  T   ++S     
Sbjct: 423 EVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSG---- 478

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL----DIVCW 473
                                 Y  SG       C    LA  V +RI  L    ++V W
Sbjct: 479 ----------------------YSMSG-------CSEEALA--VINRIKSLGLTPNVVSW 507

Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
            +MI+G   N    +A  FF QM++  + P   + +T+L +CA  S   +G ++H    K
Sbjct: 508 TAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMK 567

Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
            G+V+DI++ +ALI+MY K G +  A + F  +  K    WN M+ GYA  G+G+E   L
Sbjct: 568 HGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTL 627

Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
           + +M  +G++PD ITF A+L+ C +SGLV  G + F+SM+ D+ + P ++HY+CM+D LG
Sbjct: 628 FDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLG 687

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
           +AG   EA   I  MP K D  IW  +L++CRLH ++++A+ AA  LFRL+P NSA Y L
Sbjct: 688 KAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVL 747

Query: 714 LANIYSSLGRWDDLRAVRELMS 735
           + NIYS+  RW D+  ++E M+
Sbjct: 748 MMNIYSTFERWGDVERLKESMT 769



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 154/581 (26%), Positives = 271/581 (46%), Gaps = 60/581 (10%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G  +HA +L+ G   D  L   LI LY KC     A  +FD+ P ++ + WN I+ A  +
Sbjct: 150 GMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLR 209

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
           S+                   W             E AL +  +M +     T  T+  +
Sbjct: 210 SE------------------RW-------------EDALELSRRMQSASAKATDGTIVKL 238

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
            +A   L  +  G++ HG VI+ G   N  + N+++S+Y++    + A  VF+   + N 
Sbjct: 239 LQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNL 298

Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC---------G 237
            ++ +++S  A    +  A ++FR M   ++  D ++ +S+L     +G           
Sbjct: 299 ASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRS 358

Query: 238 VESDVFAQSDNKFSRNVH----------GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           ++S  F       +  +           G+++H   ++   E D+++  SL+DMY KN  
Sbjct: 359 LQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDC 418

Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
           ++ AEV+F +   +++ +WN +I+GY  K     A +LL +MK  G + D VT  +++  
Sbjct: 419 LEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSG 478

Query: 348 CVRSGDIKTGREMFDSMPS----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
              SG  +    + + + S    P+V SW AM+S   Q+EN+ +A++ F +MQ   VKP+
Sbjct: 479 YSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPN 538

Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH 463
            TT++ +L +CA   +L+ G+++H  S+K     D Y+A+ LI +YSK  + ++A  VF 
Sbjct: 539 STTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFR 598

Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
            I E  + CWN M+ G ++     E F  F  M +  + P   +F  +LS C        
Sbjct: 599 NIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMD 658

Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
           G +    ++ D  +N        IE Y    D+ G   F D
Sbjct: 659 GWKYFDSMKTDYSIN------PTIEHYSCMVDLLGKAGFLD 693



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/491 (22%), Positives = 219/491 (44%), Gaps = 34/491 (6%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +H +++R G   +T +CN ++ +YS+ N    A+ +FD     ++ SWN+I+S+   
Sbjct: 251 GKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAV 310

Query: 67  SDDLEFAYKLFDEMP----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
           +  L  A+ LF EM     + ++++WN+L+S  +  G  E  L+    + + GF P   +
Sbjct: 311 NGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCS 370

Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
           + S  +A   L     G+  HG +++  L+ ++YV  +L+ +Y K    + A  VF    
Sbjct: 371 ITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTK 430

Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
             N   + +++SG         A ++   M  + +  D V+ +S++   +  GC  E+  
Sbjct: 431 NKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALA 490

Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
                N+                LG   ++    +++    +N +   A   FS + E +
Sbjct: 491 VI---NRIK-------------SLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEEN 534

Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSC-------GFEPDEVTSINMLVACVRSGDIK 355
           V   +  I+      ++     LL++ +         GF  D   +  ++    + G +K
Sbjct: 535 VKPNSTTISTL---LRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLK 591

Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
              E+F ++   ++  WN M+  Y+   + +E   LF  M   G++PD  T   +LS C 
Sbjct: 592 VAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCK 651

Query: 416 AMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQRNELAERVFHRIPE-LDIVC 472
             G++  G + +  S+KT   I+  +   S ++ +  K    + A    H +P+  D   
Sbjct: 652 NSGLVMDGWK-YFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASI 710

Query: 473 WNSMIAGLSLN 483
           W +++A   L+
Sbjct: 711 WGAVLAACRLH 721



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 20/183 (10%)

Query: 525 RQVHAQ-IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
           R++HAQ I+     N + +  +++  Y + GD   A + F +   +N + WN  +  +A 
Sbjct: 48  RELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFAS 107

Query: 584 NGYGD--EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPI 641
            G GD  E + ++K++   GVK D      +L  C     + +G+E+   + L  G + +
Sbjct: 108 FG-GDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACL-LKRGFQ-V 164

Query: 642 LDHYTCMI-----DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL----LSSCRLHANVRL 692
             H +C +      CLG       A  + DE P ++D  +W  +    L S R    + L
Sbjct: 165 DVHLSCALINLYEKCLG----IDRANQVFDETPLQED-FLWNTIVMANLRSERWEDALEL 219

Query: 693 AKR 695
           ++R
Sbjct: 220 SRR 222


>gi|414885414|tpg|DAA61428.1| TPA: hypothetical protein ZEAMMB73_429908 [Zea mays]
          Length = 817

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 211/735 (28%), Positives = 374/735 (50%), Gaps = 64/735 (8%)

Query: 52  KDIYSWNAILSAQCKSDDLEFAYKLFDEMPER-NVVSWNNLISALVRNGLEEKALSV--- 107
           +D Y  + ++    K   L  A + F++   R +VV WN  IS  VRNG  E AL V   
Sbjct: 105 RDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNG--EHALGVEMF 162

Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
            + +      P   T + V  A  A  ++  GR  HG+V++   + +++V  +++++Y K
Sbjct: 163 LDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVK 222

Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
           CG    A+  F  M   N V++T  ++G  + +  V A+ +   M+R  V+I+  + +S+
Sbjct: 223 CGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINKYTATSI 282

Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
           L  C++     E++                QVH + IK     D  +  +L+  YA  G 
Sbjct: 283 LLACSQTSMIREAN----------------QVHGMIIKSELYLDHVVKEALISTYANAGA 326

Query: 288 MDSAEVIFS---NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE------ 338
           +   E +F     +  RS+  W+  I+G   ++   ++I+LL+RM      P++      
Sbjct: 327 VQLCEKVFQEVDTVSNRSI--WSAFISGV-SRHSVQRSIQLLRRMLFQCLRPNDKCYASV 383

Query: 339 VTSIN--------------------MLVACV------RSGDIKTGREMFDSMPSPSVSSW 372
            +S++                    +LVA        R  D+K   ++F+ M      SW
Sbjct: 384 FSSVDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSW 443

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
            +M++ ++   +  EA ++ R M   G  P+  +L+ ILS+C     L  GK+VH   L+
Sbjct: 444 TSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLR 503

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
                 + +   L+ +YSKC+  + A ++F   P  D +  +SMI+G + N    EA   
Sbjct: 504 AYGRTTS-INHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSL 562

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           F+ M     +  +F  ++++S CA ++  F G+ +H    K G ++D+ V S+L+++Y K
Sbjct: 563 FQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSK 622

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
            G++  +R+ FD +   + VTW  +I GYAQ+G   +A+ L+  MI  GVKPD +  V++
Sbjct: 623 SGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSV 682

Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
           L+AC  +GLV+ G + FNSM+  +GVEP+L HY CM+D LGR+G   EA+  I+ MP K 
Sbjct: 683 LSACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKP 742

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
           + ++W  LL++CR+H +V L  R  E     +  +S  ++ ++NI ++ G W+ +  +R+
Sbjct: 743 NSMVWSTLLAACRVHDDVVLG-RFVENKIHEENCDSGCFATMSNIRANSGDWEGVMEIRK 801

Query: 733 LMSENCIVKDPAYSL 747
            + +  + K+P +S 
Sbjct: 802 SVKD--VEKEPGWSF 814



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 163/613 (26%), Positives = 270/613 (44%), Gaps = 102/613 (16%)

Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT-FTAMMSGLAKTDRVVEAL 206
           K GL ++ Y+ + ++ L AK G    A+  FE+      V  +   +SG  +       +
Sbjct: 100 KDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGV 159

Query: 207 EMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK 265
           EMF  M+R +    +S + S VL  CA    G E  V             G+ VH + ++
Sbjct: 160 EMFLDMVRGSTCEPNSFTYSGVLSACA---AGEELGV-------------GRAVHGMVLR 203

Query: 266 LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL 325
              E D+ +  S+++MY K G M +A   F  +P R+VVSW   IAG+ Q+     A+ L
Sbjct: 204 RDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLL 263

Query: 326 LQRMKSCGFEPDEVTSINMLVACVRS---------------------------------- 351
           L  M   G   ++ T+ ++L+AC ++                                  
Sbjct: 264 LTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYAN 323

Query: 352 -GDIKTGREMFDSMPSPSVSS-WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
            G ++   ++F  + + S  S W+A +S  S+  + + +I+L R M F+ ++P+    A 
Sbjct: 324 AGAVQLCEKVFQEVDTVSNRSIWSAFISGVSR-HSVQRSIQLLRRMLFQCLRPNDKCYAS 382

Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
           + SS  +    E G+Q+H   +K        VAS L  +YS+C   + + +VF  + E D
Sbjct: 383 VFSSVDSS---ELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQD 439

Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
            V W SMIAG + +   +EAF   + M      P   S + +LS+C       +G++VH 
Sbjct: 440 EVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHG 499

Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
            + +  Y     +   L+ MY KC D+  AR+ FD    K+ +  + MI GYA NGY +E
Sbjct: 500 HVLR-AYGRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEE 558

Query: 590 AVRLYKDMIASGVKPDDITFVAILTAC--------------------------------- 616
           A+ L++ M+A+G   D     +I++ C                                 
Sbjct: 559 ALSLFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVK 618

Query: 617 --SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEM---PCK 671
             S SG +D   ++F+ + +     P L  +T +ID   + G   +A  L D M     K
Sbjct: 619 LYSKSGNLDDSRKVFDELDV-----PDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVK 673

Query: 672 DDPVIWEVLLSSC 684
            D VI   +LS+C
Sbjct: 674 PDTVILVSVLSAC 686



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 225/469 (47%), Gaps = 55/469 (11%)

Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER-SVVSWNVMIAGYG 314
            +Q++C   K G   D ++ ++++D+ AK+G +  A   F +   R SVV WN  I+G  
Sbjct: 91  AEQLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAV 150

Query: 315 QKYQSTKAIEL-LQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------------- 360
           +  +    +E+ L  ++    EP+  T   +L AC    ++  GR +             
Sbjct: 151 RNGEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDV 210

Query: 361 ----------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
                                 F  MP  +V SW   ++ + Q E+   A+ L  EM   
Sbjct: 211 FVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRS 270

Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
           GV  ++ T   IL +C+   ++    QVH   +K+  ++D+ V   LI  Y+     +L 
Sbjct: 271 GVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLC 330

Query: 459 ERVFHRIPELDIVC----WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
           E+VF    E+D V     W++ I+G+S +S+   +    ++M    + P    +A+V SS
Sbjct: 331 EKVFQ---EVDTVSNRSIWSAFISGVSRHSVQ-RSIQLLRRMLFQCLRPNDKCYASVFSS 386

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
              + SS  GRQ+H  + KDG+++ + V SAL  MY +C D+  + + F+ M  ++ V+W
Sbjct: 387 ---VDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSW 443

Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
             MI G+A +G+  EA ++ ++MIA G  P+D++  AIL+AC+    +  G E+   +  
Sbjct: 444 TSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLR 503

Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
            +G    ++H  C++    +      A  L D  PCKD     +++LSS
Sbjct: 504 AYGRTTSINH--CLVSMYSKCKDLQTARKLFDATPCKD-----QIMLSS 545



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 223/474 (47%), Gaps = 62/474 (13%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIY----SWNAI 60
           V   LL   +LR+G+  + +    ++   S+ +    A  +   +   ++Y       A+
Sbjct: 258 VNAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEAL 317

Query: 61  LSAQCKSDDLEFAYKLFDEMPE-RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
           +S    +  ++   K+F E+    N   W+  IS + R+ ++ +++ +  +M  +   P 
Sbjct: 318 ISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFISGVSRHSVQ-RSIQLLRRMLFQCLRPN 376

Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
               ASVF   +++   E GR+ H LVIK G    + VA+AL ++Y++C   K +  VFE
Sbjct: 377 DKCYASVF---SSVDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFE 433

Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
           EM E +EV++T+M++G A     VEA ++ R MI +  + + VSLS++L  C    C ++
Sbjct: 434 EMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLK 493

Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                           G++VH   ++  +     +++ L+ MY+K  D+ +A  +F   P
Sbjct: 494 ----------------GKEVHGHVLR-AYGRTTSINHCLVSMYSKCKDLQTARKLFDATP 536

Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------- 349
            +  +  + MI+GY     S +A+ L Q M + GF  D     +++  C           
Sbjct: 537 CKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSIISICANMARPFCGKL 596

Query: 350 -------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
                                    +SG++   R++FD +  P + +W A++  Y+Q  +
Sbjct: 597 LHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGS 656

Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
            ++A+ LF  M   GVKPD   L  +LS+C   G++E G + H  S++T   ++
Sbjct: 657 SQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVEEGFK-HFNSMRTVYGVE 709



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 143/609 (23%), Positives = 271/609 (44%), Gaps = 88/609 (14%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  +LR     D F+   ++ +Y KC    +A + F +MP +++ SW   ++   +
Sbjct: 194 GRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQ 253

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
            +D   A  L  EM               +R+G+   A++ Y             T  S+
Sbjct: 254 QEDPVNAMLLLTEM---------------LRSGV---AINKY-------------TATSI 282

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM-SEPN 185
             A +    +    + HG++IK  L  +  V  AL+S YA  G  +    VF+E+ +  N
Sbjct: 283 LLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEVDTVSN 342

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
              ++A +SG+++   V  ++++ R M+ +               C R      + VF+ 
Sbjct: 343 RSIWSAFISGVSR-HSVQRSIQLLRRMLFQ---------------CLRPNDKCYASVFSS 386

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
            D+    +  G+Q+H L IK GF   + ++++L  MY++  D+  +  +F  + E+  VS
Sbjct: 387 VDS----SELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVS 442

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------- 348
           W  MIAG+     S +A ++L+ M + GF P++V+   +L AC                 
Sbjct: 443 WTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVL 502

Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
                             +  D++T R++FD+ P       ++M+S Y+ +   +EA+ L
Sbjct: 503 RAYGRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSL 562

Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
           F+ M   G   DR   + I+S CA M     GK +H  + K     D  V+S L+ +YSK
Sbjct: 563 FQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSK 622

Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
               + + +VF  +   D+V W ++I G + +    +A   F  M +  + P      +V
Sbjct: 623 SGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSV 682

Query: 512 LSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK- 569
           LS+C +     +G +  ++     G    +     ++++  + G +  A+ F + M  K 
Sbjct: 683 LSACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKP 742

Query: 570 NTVTWNEMI 578
           N++ W+ ++
Sbjct: 743 NSMVWSTLL 751



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 146/312 (46%), Gaps = 19/312 (6%)

Query: 423 GKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLS 481
            +Q++ A+ K     D Y+ S ++ + +K  R   A R F        +VCWN+ I+G  
Sbjct: 91  AEQLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAV 150

Query: 482 LN---SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
            N   +L +E  MF   +R +   P  F+++ VLS+CA       GR VH  + +     
Sbjct: 151 RNGEHALGVE--MFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEY 208

Query: 539 DIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI 598
           D+FVG++++ MY KCG +  A   F  M  +N V+W   I G+ Q      A+ L  +M+
Sbjct: 209 DVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEML 268

Query: 599 ASGVKPDDITFVAILTACSHSGLVDV-----GVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
            SGV  +  T  +IL ACS + ++       G+ I + + LDH V+  L      I    
Sbjct: 269 RSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEAL------ISTYA 322

Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR-LDPKNSAPYS 712
            AG     E +  E+    +  IW   +S    H+  R  +     LF+ L P +    S
Sbjct: 323 NAGAVQLCEKVFQEVDTVSNRSIWSAFISGVSRHSVQRSIQLLRRMLFQCLRPNDKCYAS 382

Query: 713 LLANIYSS-LGR 723
           + +++ SS LGR
Sbjct: 383 VFSSVDSSELGR 394


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 171/474 (36%), Positives = 278/474 (58%), Gaps = 16/474 (3%)

Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
           N ++    ++GD+D A  +F  +  ++ ++WN ++ G  +    ++ +E  Q       E
Sbjct: 65  NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISK--DPSRMMEAHQLFDEIP-E 121

Query: 336 PDEVTSINMLVAC-VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
           PD   S N++++C VR+ + +  +  FD MP    +SWN M++ Y++    ++A +LF  
Sbjct: 122 PDTF-SYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGIYSKCQ 453
           M    ++ +  +   ++S     G +E G    A+     + +   VA + +I  Y K +
Sbjct: 181 M----MEKNEVSWNAMIS-----GYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAK 231

Query: 454 RNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
           + ELAE +F  +    ++V WN+MI+G   NS   +    F+ M +  + P     ++ L
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291

Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
             C++LS+   GRQ+H  + K    ND+   ++LI MYCKCG++  A + F++M  K+ V
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351

Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
            WN MI GYAQ+G  D+A+ L+++MI + ++PD ITFVA+L AC+H+GLV++G+  F SM
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 411

Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
             D+ VEP  DHYTCM+D LGRAG   EA  LI  MP +    ++  LL +CR+H NV L
Sbjct: 412 VRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVEL 471

Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
           A+ AAE+L +L+ +N+A Y  LANIY+S  RW+D+  VR+ M E+ +VK P YS
Sbjct: 472 AEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYS 525



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 210/472 (44%), Gaps = 68/472 (14%)

Query: 8   KLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           +++ AH L + + + DTF  N ++  Y +  N   AQ  FD+MP KD  SWN +++   +
Sbjct: 108 RMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYAR 167

Query: 67  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
             ++E A +LF  M E+N VSWN +IS  +  G  EKA   +                  
Sbjct: 168 RGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFF------------------ 209

Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EPN 185
                                K+   + +    A+++ Y K    + A  +F++M+   N
Sbjct: 210 ---------------------KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKN 248

Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
            VT+ AM+SG  +  R  + L++FR M+ + +  +S  LSS L  C+             
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS------------- 295

Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
              + S    G+Q+H +  K     D+    SL+ MY K G++  A  +F  + ++ VV+
Sbjct: 296 ---ELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352

Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM- 364
           WN MI+GY Q   + KA+ L + M      PD +T + +L+AC  +G +  G   F+SM 
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412

Query: 365 ----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
                 P    +  M+    ++   +EA+KL R M FR   P       +L +C     +
Sbjct: 413 RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR---PHAAVFGTLLGACRVHKNV 469

Query: 421 ESGKQVHAASLKTASH-IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
           E  +      L+  S     YV   L  IY+   R E   RV  R+ E ++V
Sbjct: 470 ELAEFAAEKLLQLNSQNAAGYVQ--LANIYASKNRWEDVARVRKRMKESNVV 519



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           G+ +H  + ++ L +D      LI +Y KC     A  LF+ M  KD+ +WNA++S   +
Sbjct: 303 GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQ 362

Query: 67  SDDLEFAYKLFDEMPERNV-VSWNNLISALV---RNGLEEKALSVYNKMSNEGFV---PT 119
             + + A  LF EM +  +   W   ++ L+     GL    ++ +  M  +  V   P 
Sbjct: 363 HGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD 422

Query: 120 HIT 122
           H T
Sbjct: 423 HYT 425



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 45/186 (24%)

Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN-GYGDEAVRLYKD 596
           + IF  + +I    + GDI GA + F  M  KNT+TWN ++ G +++     EA +L+ +
Sbjct: 59  DQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDE 118

Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
           +      P+  TF                                   Y  M+ C  R  
Sbjct: 119 I------PEPDTF----------------------------------SYNIMLSCYVRNV 138

Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
           +F +A+   D MP K D   W  +++    +A     ++A E  + +  KN   ++ + +
Sbjct: 139 NFEKAQSFFDRMPFK-DAASWNTMITG---YARRGEMEKARELFYSMMEKNEVSWNAMIS 194

Query: 717 IYSSLG 722
            Y   G
Sbjct: 195 GYIECG 200


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 164/490 (33%), Positives = 265/490 (54%), Gaps = 35/490 (7%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           +Q+H      G   D   +N L+  YA  GD+ +A  +F  +P R+V+SWN++  GY   
Sbjct: 61  RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGY--- 117

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAML 376
                                           +++GD+   R++FD MP  +V++WNAM+
Sbjct: 118 --------------------------------IKNGDLGGARKLFDEMPERNVATWNAMV 145

Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
           +  +     +E++  F +M+  G+ PD   L  +   CA +  + +G+QVHA  +++   
Sbjct: 146 AGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLD 205

Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM 496
            D  V S L  +Y +C   +  E V   +P L IV  N++IAG + N     A  +F  M
Sbjct: 206 RDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMM 265

Query: 497 RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDI 556
           R   +     +F + +SSC+ L++  QG+Q+H Q+ K G    + V + L+ MY +CG +
Sbjct: 266 RSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCL 325

Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
             + + F    G +T   + MI  Y  +G+G +A+ L+K M+  G +P D+TF+A+L AC
Sbjct: 326 GDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYAC 385

Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
           SHSGL + G++ F  M   +G++P + HYTC++D LGR+G   EAE LI  MP   D VI
Sbjct: 386 SHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVI 445

Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
           W+ LLS+C+   N  +A+R A+ +  LDP +SA Y LL+NI ++  RW D+  VR+ M +
Sbjct: 446 WKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRD 505

Query: 737 NCIVKDPAYS 746
           N + K+P  S
Sbjct: 506 NNVRKEPGVS 515



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 201/412 (48%), Gaps = 24/412 (5%)

Query: 8   KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
           + LHA    +G   D F  N L+  Y+   +  +A+ LF+++P +++ SWN +     K+
Sbjct: 61  RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 120

Query: 68  DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
            DL  A KLFDEMPERNV +WN +++ L   G +E++L  +  M  EG  P    L SVF
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 180

Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
           +    L DV  GR+ H  V++ GLD+++ V ++L  +Y +CG  +    V   +   + V
Sbjct: 181 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 240

Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
           +   +++G  +      ALE F +M    V+ D V+  S +  C        SD+ A + 
Sbjct: 241 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSC--------SDLAALA- 291

Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
                   GQQ+H   +K G +  + +   L+ MY++ G +  +E +F           +
Sbjct: 292 -------QGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 344

Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
            MI+ YG      KAIEL ++M + G EP +VT + +L AC  SG  + G + F+ M   
Sbjct: 345 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 404

Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
               PSV  +  ++    +S    EA  L   M    + PD      +LS+C
Sbjct: 405 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMP---LTPDGVIWKTLLSAC 453



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 120/296 (40%), Gaps = 48/296 (16%)

Query: 5   VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
           V G+ +HA+++R+GL  D  + + L  +Y +C      + +   +P   I S N I++ +
Sbjct: 190 VTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGR 249

Query: 65  CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
                                           +NG  E AL  +  M + G     +T  
Sbjct: 250 -------------------------------TQNGDSEGALEYFCMMRSVGVAADVVTFV 278

Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
           S   + + L  +  G++ HG V+K G+DK + V   L+ +Y++CG    +  VF      
Sbjct: 279 SAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGS 338

Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVF 243
           +    +AM+S         +A+E+F+ M+        V+  ++L  C+  G   E  D F
Sbjct: 339 DTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCF 398

Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
                             +T   G +  +     ++D+  ++G +D AE +  ++P
Sbjct: 399 ----------------ELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMP 438


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 172/524 (32%), Positives = 276/524 (52%), Gaps = 47/524 (8%)

Query: 257 QQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
           + +H   +K G   D+ ++ SL+++Y + G+   A  +F  +PE++VV+W  +I GY   
Sbjct: 98  KALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLN 157

Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------------------------- 349
            Q   A+E+   M   G  P + T   ML ACV                           
Sbjct: 158 SQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIG 217

Query: 350 --------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE-AIKLFREMQFRGV 400
                   +SG++++G   F  +P  +V +W  M+S+ ++ EN+ E  + LF +M    V
Sbjct: 218 NSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEV 277

Query: 401 KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAER 460
            P+  TL  ++S C     +  GKQV     K     +  V +  + +Y +    E A R
Sbjct: 278 MPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMR 337

Query: 461 VFHRIPELDIVCWNSMIAG-----------LSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
           +F  + +  ++ WN+MI+G           L   S   +A   F+ + ++ M P  F+F+
Sbjct: 338 LFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFS 397

Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
           ++LS C+ + +  QG Q+HAQ  K G+++D+ V SAL+ MY KCG I  A + F  M  +
Sbjct: 398 SILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTR 457

Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
             VTW  MI GY+Q+G   +A++L++DMI +G KP++ITFV++L+ACS++GLV+  +  F
Sbjct: 458 TLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYF 517

Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
           + MQ ++ +EP++DHY CMID   R G   +A   I     + +  IW  L++ CR H N
Sbjct: 518 DMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGN 577

Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVREL 733
           + LA  AA+ L  L PK    Y LL N+Y S GRW D+  VR+L
Sbjct: 578 MELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKL 621



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 231/493 (46%), Gaps = 67/493 (13%)

Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
           HG ++K G   +I+VA +L+++Y +CG ++ A  +F+EM E N VT+TA+++G     + 
Sbjct: 101 HGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQP 160

Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHC 261
           V ALE+F  M++        +L  +L  C                   S N+  G+QVH 
Sbjct: 161 VLALEVFVEMLKLGRYPSDYTLGGMLSACVA-----------------SHNIDLGKQVHG 203

Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
            TIK G  +   + NSL  +Y K+G+++S    F  +P+++V++W  MI+   +    T+
Sbjct: 204 YTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTE 263

Query: 322 -AIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--------------------- 359
             + L   M      P+E T  +++  C  S D+  G++                     
Sbjct: 264 LGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTM 323

Query: 360 --------------MFDSMPSPSVSSWNAMLSSYSQSENHK-----------EAIKLFRE 394
                         +F+ M   SV +WNAM+S ++Q  +             +A+K+FR+
Sbjct: 324 YLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRD 383

Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
           +    +KPD  T + ILS C+ M  LE G+Q+HA ++KT    D  V S L+ +Y+KC  
Sbjct: 384 LVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGC 443

Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
            E A + F  +P   +V W SMI+G S +    +A   F+ M      P + +F ++LS+
Sbjct: 444 IEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSA 503

Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDIYGARQFFDMM-HGKNTV 572
           C+      +  +    ++ + ++  +      +I+M+ + G +  A  F        N  
Sbjct: 504 CSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEA 563

Query: 573 TWNEMIHGYAQNG 585
            W+ ++ G   +G
Sbjct: 564 IWSSLVAGCRSHG 576



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/526 (25%), Positives = 235/526 (44%), Gaps = 102/526 (19%)

Query: 6   AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
             K LH H+++ G   D F+   L+ +Y +C N+  A++LF                   
Sbjct: 96  GAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLF------------------- 136

Query: 66  KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
                       DEMPE+NVV+W  LI+    N     AL V+ +M   G  P+  TL  
Sbjct: 137 ------------DEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGG 184

Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
           +  A  A  +++ G++ HG  IK G      + N+L  LY K G  +  +  F+ + + N
Sbjct: 185 MLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKN 244

Query: 186 EVTFTAMMSGLAKTDRVVE-ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
            +T+T M+S  A+ +   E  L +F  M++  V  +  +L+SV+ +C   G  ++ ++  
Sbjct: 245 VITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLC---GTSLDMNL-- 299

Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
                      G+QV     K+G   +L + NS + +Y + G+ + A  +F  + + SV+
Sbjct: 300 -----------GKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVI 348

Query: 305 SWNVMIAGYGQKYQSTK-----------AIELLQRMKSCGFEPDEVTSINMLVAC----- 348
           +WN MI+G+ Q   S K           A+++ + +     +PD  T  ++L  C     
Sbjct: 349 TWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMA 408

Query: 349 ------VRSGDIKTG------------------------REMFDSMPSPSVSSWNAMLSS 378
                 + +  IKTG                         + F  MP+ ++ +W +M+S 
Sbjct: 409 LEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISG 468

Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI- 437
           YSQ     +AI+LF +M   G KP+  T   +LS+C+  G++E   + +   ++   HI 
Sbjct: 469 YSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMR-YFDMMQNEYHIE 527

Query: 438 ---DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
              D+Y    +I ++ +  R + A     R   E +   W+S++AG
Sbjct: 528 PLMDHY--GCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAG 571



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 195/381 (51%), Gaps = 36/381 (9%)

Query: 58  NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRN-GLEEKALSVYNKMSNEGF 116
           N++     KS +LE   + F  +P++NV++W  +ISA   +    E  L+++  M     
Sbjct: 218 NSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEV 277

Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
           +P   TL SV       LD+  G++  G   KIG   N+ V N+ + LY + G T+ A+ 
Sbjct: 278 MPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMR 337

Query: 177 VFEEMSEPNEVTFTAMMSGLAKT-----------DRVVEALEMFRLMIRKAVSIDSVSLS 225
           +FEEM + + +T+ AM+SG A+             R  +AL++FR ++R A+  D  + S
Sbjct: 338 LFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFS 397

Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
           S+L VC        S + A           G+Q+H  TIK GF +D+ ++++L++MY K 
Sbjct: 398 SILSVC--------STMMALE--------QGEQIHAQTIKTGFLSDVVVNSALVNMYNKC 441

Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
           G ++ A   F  +P R++V+W  MI+GY Q  +   AI+L + M   G +P+E+T +++L
Sbjct: 442 GCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLL 501

Query: 346 VACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGV 400
            AC  +G ++     FD M +     P +  +  M+  + +     +A    +    +G 
Sbjct: 502 SACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKR---KGF 558

Query: 401 KPDRTTLAIILSSCAAMGILE 421
           +P+    + +++ C + G +E
Sbjct: 559 EPNEAIWSSLVAGCRSHGNME 579



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 217/480 (45%), Gaps = 65/480 (13%)

Query: 314 GQKYQSTKAIELLQR----------------MKSCGFEPDEVTSINMLVACVRSGDIKTG 357
           GQ  QS   + LL R                M   G   D   + +++   +R G+ +  
Sbjct: 73  GQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDA 132

Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
           R +FD MP  +V +W A+++ Y+ +     A+++F EM   G  P   TL  +LS+C A 
Sbjct: 133 RNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVAS 192

Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
             ++ GKQVH  ++K  +     + + L  +Y+K    E   R F RIP+ +++ W +MI
Sbjct: 193 HNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMI 252

Query: 478 AGLSLNSLDIE-AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
           +  + +    E     F  M + E+ P +F+  +V+S C        G+QV     K G 
Sbjct: 253 SACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGC 312

Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ-----------NG 585
             ++ V ++ + +Y + G+   A + F+ M   + +TWN MI G+AQ             
Sbjct: 313 ATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARS 372

Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACS-----------HSGLVDVG--------- 625
            G +A+++++D++ S +KPD  TF +IL+ CS           H+  +  G         
Sbjct: 373 RGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNS 432

Query: 626 --VEIFNSMQ-LDHGVEPILD-------HYTCMIDCLGRAGHFHEAEMLIDEM---PCKD 672
             V ++N    +++  +  ++        +T MI    + G  H+A  L ++M     K 
Sbjct: 433 ALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKP 492

Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEEL---FRLDPKNSAPYSLLANIYSSLGRWDDLRA 729
           + + +  LLS+C     V  A R  + +   + ++P     Y  + +++  LGR DD  A
Sbjct: 493 NEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDH-YGCMIDMFVRLGRLDDAYA 551



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 151/312 (48%), Gaps = 9/312 (2%)

Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
           N  L +  +  + +EA+ + +E    G          +L  C   G L   K +H   +K
Sbjct: 51  NGRLEAPPRPLDAQEAMAMLKE----GQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVK 106

Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
           T + +D +VA+ L+ +Y +C  ++ A  +F  +PE ++V W ++I G +LNS  + A   
Sbjct: 107 TGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEV 166

Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
           F +M +   YP+ ++   +LS+C    +   G+QVH    K G  +   +G++L  +Y K
Sbjct: 167 FVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTK 226

Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN-GYGDEAVRLYKDMIASGVKPDDITFVA 611
            G++    + F  +  KN +TW  MI   A++  Y +  + L+ DM+   V P++ T  +
Sbjct: 227 SGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTS 286

Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
           +++ C  S  +++G ++        G    L      +    R G   EA  L +EM  +
Sbjct: 287 VMSLCGTSLDMNLGKQV-QGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEM--E 343

Query: 672 DDPVI-WEVLLS 682
           D+ VI W  ++S
Sbjct: 344 DNSVITWNAMIS 355



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/366 (21%), Positives = 151/366 (41%), Gaps = 56/366 (15%)

Query: 7   GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
           GK +     + G   +  + N  + LY +   T  A  LF++M    + +WNA++S   +
Sbjct: 300 GKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQ 359

Query: 67  -----SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
                 DDL    + F                         +AL ++  +      P   
Sbjct: 360 IMDSAKDDLHARSRGF-------------------------QALKIFRDLVRSAMKPDLF 394

Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
           T +S+    + ++ +E G + H   IK G   ++ V +AL+++Y KCG  ++A   F EM
Sbjct: 395 TFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEM 454

Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES- 240
                VT+T+M+SG ++  R  +A+++F  MI      + ++  S+L  C+  G   E+ 
Sbjct: 455 PTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAM 514

Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL-- 298
             F    N++                  E  +     ++DM+ + G +D A         
Sbjct: 515 RYFDMMQNEYH----------------IEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGF 558

Query: 299 -PERSVVSWNVMIAG---YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
            P  ++  W+ ++AG   +G    +  A + L  +K    E   V  +NM ++  R  D+
Sbjct: 559 EPNEAI--WSSLVAGCRSHGNMELAFYAADRLLELKPKVVE-TYVLLLNMYISTGRWRDV 615

Query: 355 KTGREM 360
              R++
Sbjct: 616 ARVRKL 621


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.134    0.401 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,273,911,613
Number of Sequences: 23463169
Number of extensions: 459402042
Number of successful extensions: 1352390
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9285
Number of HSP's successfully gapped in prelim test: 2975
Number of HSP's that attempted gapping in prelim test: 1027520
Number of HSP's gapped (non-prelim): 97473
length of query: 748
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 598
effective length of database: 8,839,720,017
effective search space: 5286152570166
effective search space used: 5286152570166
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)