BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041741
(748 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/750 (54%), Positives = 560/750 (74%), Gaps = 12/750 (1%)
Query: 1 KKAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAI 60
++ ++GK++H I+R G+ DT+LCNRL++LY +C + A+ +FD+M +D+YSWNA
Sbjct: 19 ERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAF 78
Query: 61 LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
L+ +CK DL A ++FD MPER+VVSWNN+IS LVR G EEKAL VY +M +GF+P+
Sbjct: 79 LTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSR 138
Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW-TKHAVPVFE 179
TLASV A + +LD G RCHG+ +K GLDKNI+V NALLS+YAKCG+ + V VFE
Sbjct: 139 FTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFE 198
Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA-REGCGV 238
+S+PNEV++TA++ GLA+ ++V+EA++MFRLM K V +DSV LS++L + A REGC
Sbjct: 199 SLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDS 258
Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
S+++ N G+Q+HCL ++LGF DLHL+NSLL++YAKN DM+ AE+IF+ +
Sbjct: 259 LSEIYG--------NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR 358
PE +VVSWN+MI G+GQ+Y+S K++E L RM+ GF+P+EVT I++L AC RSGD++TGR
Sbjct: 311 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR 370
Query: 359 EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
+F S+P PSVS+WNAMLS YS E+++EAI FR+MQF+ +KPD+TTL++ILSSCA +
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 419 ILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR-IPELDIVCWNSMI 477
LE GKQ+H ++T ++++ SGLI +YS+C++ E++E +F I ELDI CWNSMI
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMI 490
Query: 478 AGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGY 536
+G N LD +A + F++M Q + P + SFATVLSSC++L S GRQ H + K GY
Sbjct: 491 SGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY 550
Query: 537 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
V+D FV +AL +MYCKCG+I ARQFFD + KNTV WNEMIHGY NG GDEAV LY+
Sbjct: 551 VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRK 610
Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
MI+SG KPD ITFV++LTACSHSGLV+ G+EI +SMQ HG+EP LDHY C++DCLGRAG
Sbjct: 611 MISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAG 670
Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
+AE L + P K V+WE+LLSSCR+H +V LA+R AE+L RLDP++SA Y LL+N
Sbjct: 671 RLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSN 730
Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
YSSL +WDD A++ LM++N + K P S
Sbjct: 731 TYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 266/796 (33%), Positives = 432/796 (54%), Gaps = 73/796 (9%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK HAH++ +G TF+ N L+++Y+ + SA +FDKMP +D+ SWN +++ K
Sbjct: 67 GKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 126
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
S+D+ A F+ MP R+VVSWN+++S ++NG K++ V+ M EG T A +
Sbjct: 127 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 186
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
K + L D G + HG+V+++G D ++ A+ALL +YAK ++ VF+ + E N
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
V+++A+++G + + + AL+ F+ M + + +SVL CA A S
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA-----------ALS 295
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
+ + G Q+H +K F AD + + LDMYAK +M A+++F N + S+
Sbjct: 296 ELRL-----GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------ 360
N MI GY Q+ KA+ L R+ S G DE++ + AC + G ++
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 361 -----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
FD M SWNA+++++ Q+ E + L
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470
Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
F M ++PD T IL +C G L G ++H++ +K+ ++ V LI +YSK
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 452 CQRNELAERVFHR----------IPELD----------IVCWNSMIAGLSLNSLDIEAFM 491
C E AE++ R + EL+ V WNS+I+G + +A M
Sbjct: 530 CGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589
Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
F +M + + P +F++ATVL +CA L+S+ G+Q+HAQ+ K +D+++ S L++MY
Sbjct: 590 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYS 649
Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
KCGD++ +R F+ ++ VTWN MI GYA +G G+EA++L++ MI +KP+ +TF++
Sbjct: 650 KCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFIS 709
Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
IL AC+H GL+D G+E F M+ D+G++P L HY+ M+D LG++G A LI EMP +
Sbjct: 710 ILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFE 769
Query: 672 DDPVIWEVLLSSCRLHA-NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
D VIW LL C +H NV +A+ A L RLDP++S+ Y+LL+N+Y+ G W+ + +
Sbjct: 770 ADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDL 829
Query: 731 RELMSENCIVKDPAYS 746
R M + K+P S
Sbjct: 830 RRNMRGFKLKKEPGCS 845
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 34/294 (11%)
Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
T + + CA G LE GKQ HA + + +V + L+ +Y+ + A VF +
Sbjct: 49 TNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 108
Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQM------RQNEMYPTQF------------ 506
+P D+V WN MI G S ++ +A FF M N M
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 507 -------------SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC 553
+FA +L C+ L + G Q+H + + G D+ SAL++MY K
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 554 GDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAIL 613
+ + F + KN+V+W+ +I G QN A++ +K+M + ++L
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288
Query: 614 TACSHSGLVDVGVEIF-NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
+C+ + +G ++ ++++ D + I+ T +D + + +A++L D
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVR--TATLDMYAKCDNMQDAQILFD 340
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 122/275 (44%), Gaps = 39/275 (14%)
Query: 487 IEAFMFFKQM--RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGS 544
+ +F +F + N + T FSF V CAK + G+Q HA + G+ FV +
Sbjct: 30 VPSFSYFTDFLNQVNSVSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLN 87
Query: 545 ALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYA---------------------- 582
L+++Y D A FD M ++ V+WN+MI+GY+
Sbjct: 88 CLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVS 147
Query: 583 ---------QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQ 633
QNG +++ ++ DM G++ D TF IL CS +G++I + +
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI-HGIV 206
Query: 634 LDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
+ G + + + ++D + F E+ + +P K + V W +++ C + + LA
Sbjct: 207 VRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NSVSWSAIIAGCVQNNLLSLA 265
Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLR 728
+ +E+ +++ S S+ A++ S +LR
Sbjct: 266 LKFFKEMQKVNAGVSQ--SIYASVLRSCAALSELR 298
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 268/814 (32%), Positives = 411/814 (50%), Gaps = 92/814 (11%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ +H +++ GL +++ L+++Y+KC+ A+ +F+ + + W + S K
Sbjct: 179 GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVK 238
Query: 67 S--------------------DDLEF---------------AYKLFDEMPERNVVSWNNL 91
+ D L F A LF EM +VV+WN +
Sbjct: 239 AGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVM 298
Query: 92 ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
IS + G E A+ + M T TL SV A + +++ G H IK+GL
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358
Query: 152 DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL 211
NIYV ++L+S+Y+KC + A VFE + E N+V + AM+ G A + +E+F
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMD 418
Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
M +ID + +S+L CA A D + G Q H + IK +
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCA-----------ASHDLEM-----GSQFHSIIIKKKLAKN 462
Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
L + N+L+DMYAK G ++ A IF + +R V+WN +I Y Q ++A +L +RM
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522
Query: 332 CGFEPDEVTSINMLVACV-----------------------------------RSGDIKT 356
CG D + L AC + G IK
Sbjct: 523 CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582
Query: 357 GREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
R++F S+P SV S NA+++ YSQ+ N +EA+ LF+EM RGV P T A I+ +C
Sbjct: 583 ARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHK 641
Query: 417 MGILESGKQVHAASLKTA-SHIDNYVASGLIGIYSKCQRNELAERVFHRI--PELDIVCW 473
L G Q H K S Y+ L+G+Y + A +F + P+ IV W
Sbjct: 642 PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPK-SIVLW 700
Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
M++G S N EA F+K+MR + + P Q +F TVL C+ LSS +GR +H+ I
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760
Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAVR 592
+ D + LI+MY KCGD+ G+ Q FD M + N V+WN +I+GYA+NGY ++A++
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820
Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
++ M S + PD+ITF+ +LTACSH+G V G +IF M +G+E +DH CM+D L
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYS 712
GR G+ EA+ I+ K D +W LL +CR+H + + +AE+L L+P+NS+ Y
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYV 940
Query: 713 LLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
LL+NIY+S G W+ A+R++M + + K P YS
Sbjct: 941 LLSNIYASQGCWEKANALRKVMRDRGVKKVPGYS 974
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 219/764 (28%), Positives = 352/764 (46%), Gaps = 123/764 (16%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +H+ L G+ + L N +++LY+KC A+ FD + KD+ +WN++LS
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS---- 133
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
+ S++ + G K L + + P T + V
Sbjct: 134 ------------------------MYSSIGKPG---KVLRSFVSLFENQIFPNKFTFSIV 166
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
+VE GR+ H +IK+GL++N Y AL+ +YAKC A VFE + +PN
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 187 VTFTAMMSGLAKTDRVVEALEMF-------------------------------RLMIRK 215
V +T + SG K EA+ +F RL+ +
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGE 286
Query: 216 AVSIDSVSLSSVLGVCAREGC-GVESDVF---AQSDNKFSRNVHGQ-------------- 257
S D V+ + ++ + GC V + F +S K +R+ G
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 258 -QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQK 316
VH IKLG +++++ +SL+ MY+K M++A +F L E++ V WN MI GY
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 317 YQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG------------------- 357
+S K +EL MKS G+ D+ T ++L C S D++ G
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 358 ----------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
R++F+ M +WN ++ SY Q EN EA LF+ M G+
Sbjct: 467 NALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV 526
Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
D LA L +C + L GKQVH S+K D + S LI +YSKC + A +V
Sbjct: 527 SDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKV 586
Query: 462 FHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS 521
F +PE +V N++IAG S N+L+ EA + F++M + P++ +FAT++ +C K S
Sbjct: 587 FSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESL 645
Query: 522 FQGRQVHAQIEKDGYVND-IFVGSALIEMYCKCGDIYGARQFF-DMMHGKNTVTWNEMIH 579
G Q H QI K G+ ++ ++G +L+ MY + A F ++ K+ V W M+
Sbjct: 646 TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMS 705
Query: 580 GYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM-QLDHGV 638
G++QNG+ +EA++ YK+M GV PD TFV +L CS + G I + + L H +
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL 765
Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
+ + + +ID + G + + DEM + + V W L++
Sbjct: 766 DELTSN--TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLIN 807
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 131/267 (49%), Gaps = 17/267 (6%)
Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
KLF+ + P R LA L GK VH+ SL + + + ++ +Y
Sbjct: 57 KLFKSRKVFDEMPQRLALA-----------LRIGKAVHSKSLILGIDSEGRLGNAIVDLY 105
Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
+KC + AE+ F + E D+ WNSM++ S + F + +N+++P +F+F+
Sbjct: 106 AKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFS 164
Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
VLS+CA+ ++ GRQ+H + K G + + G AL++MY KC I AR+ F+ +
Sbjct: 165 IVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP 224
Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
NTV W + GY + G +EAV +++ M G +PD + FV ++ G + +F
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284
Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAG 656
M P + + MI G+ G
Sbjct: 285 GEMS-----SPDVVAWNVMISGHGKRG 306
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/772 (31%), Positives = 397/772 (51%), Gaps = 82/772 (10%)
Query: 10 LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
+HA IL GL D T +CN LI+LYS+ A+ +FD + KD
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD---------------- 252
Query: 70 LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
SW +IS L +N E +A+ ++ M G +PT +SV A
Sbjct: 253 ---------------HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297
Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
+ +E G + HGLV+K+G + YV NAL+SLY G A +F MS+ + VT+
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357
Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
+++GL++ +A+E+F+ M + DS +L+S++ C+ +G +F
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT-----LF------ 406
Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
GQQ+H T KLGF ++ + +LL++YAK D+++A F +VV WNVM
Sbjct: 407 -----RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 461
Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM----- 364
+ YG + + ++M+ P++ T ++L C+R GD++ G ++ +
Sbjct: 462 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 521
Query: 365 ------------------------------PSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
V SW M++ Y+Q +A+ FR+
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR 454
M RG++ D L +S+CA + L+ G+Q+HA + + D + L+ +YS+C +
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
E + F + D + WN++++G + + EA F +M + + F+F + + +
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
++ ++ QG+QVHA I K GY ++ V +ALI MY KCG I A + F + KN V+W
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 761
Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
N +I+ Y+++G+G EA+ + MI S V+P+ +T V +L+ACSH GLVD G+ F SM
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
++G+ P +HY C++D L RAG A+ I EMP K D ++W LLS+C +H N+ + +
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881
Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
AA L L+P++SA Y LL+N+Y+ +WD R+ M E + K+P S
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 933
Score = 298 bits (764), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 199/721 (27%), Positives = 344/721 (47%), Gaps = 91/721 (12%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ LH+ IL+ GL + L +L + Y LF
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFY-----------LF-------------------- 132
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
DL A+K+FDEMPER + +WN +I L L + ++ +M +E P T + V
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192
Query: 127 FKA----STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
+A S A VE + H ++ GL + V N L+ LY++ G+ A VF+ +
Sbjct: 193 LEACRGGSVAFDVVE---QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
+ ++ AM+SGL+K + EA+ +F M + + SSVL C + +ES
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKK----IESLE 305
Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
G+Q+H L +KLGF +D ++ N+L+ +Y G++ SAE IFSN+ +R
Sbjct: 306 I------------GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG---------- 352
V++N +I G Q KA+EL +RM G EPD T +++VAC G
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 353 -------------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
DI+T + F +V WN ML +Y ++ +
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
+ ++FR+MQ + P++ T IL +C +G LE G+Q+H+ +KT ++ YV S LI
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
+Y+K + + A + R D+V W +MIAG + + D +A F+QM + +
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
+S+CA L + +G+Q+HAQ G+ +D+ +AL+ +Y +CG I + F+
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
+ + WN ++ G+ Q+G +EA+R++ M G+ ++ TF + + A S + + G +
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
+ +++ G + + +I + G +AE E+ K++ V W ++++ H
Sbjct: 714 V-HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKH 771
Query: 688 A 688
Sbjct: 772 G 772
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 161/625 (25%), Positives = 279/625 (44%), Gaps = 57/625 (9%)
Query: 109 NKMSNEGFVPTHITLASVFKA---STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
+ + N G P H TL + + + LD GR+ H ++K+GLD N ++ L Y
Sbjct: 73 DSVENRGIRPNHQTLKWLLEGCLKTNGSLD--EGRKLHSQILKLGLDSNGCLSEKLFDFY 130
Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
G A VF+EM E T+ M+ LA + + E +F M+ + V+ + + S
Sbjct: 131 LFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 190
Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
VL C G V DV +Q+H + G + N L+D+Y++N
Sbjct: 191 GVLEAC--RGGSVAFDVV-------------EQIHARILYQGLRDSTVVCNPLIDLYSRN 235
Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
G +D A +F L + SW MI+G + +AI L M G P ++L
Sbjct: 236 GFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 295
Query: 346 VACVRSGDIKTGREM-----------------------------------FDSMPSPSVS 370
AC + ++ G ++ F +M
Sbjct: 296 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355
Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
++N +++ SQ ++A++LF+ M G++PD TLA ++ +C+A G L G+Q+HA +
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 415
Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
K +N + L+ +Y+KC E A F ++V WN M+ L +F
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475
Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
F+QM+ E+ P Q+++ ++L +C +L G Q+H+QI K + + +V S LI+MY
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
K G + A GK+ V+W MI GY Q + D+A+ ++ M+ G++ D++
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 595
Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
++AC+ + G +I ++ G L ++ R G E+ + ++
Sbjct: 596 NAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 671 KDDPVIWEVLLSSCRLHANVRLAKR 695
D+ + W L+S + N A R
Sbjct: 655 GDN-IAWNALVSGFQQSGNNEEALR 678
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 178/358 (49%), Gaps = 19/358 (5%)
Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
GD+ ++FD MP ++ +WN M+ + E LF M V P+ T + +L
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 412 SSCAAMGI-LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI 470
+C + + +Q+HA L V + LI +YS+ +LA RVF + D
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
W +MI+GLS N + EA F M + PT ++F++VLS+C K+ S G Q+H
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
+ K G+ +D +V +AL+ +Y G++ A F M ++ VT+N +I+G +Q GYG++A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI--------FNSMQLDHGVEPIL 642
+ L+K M G++PD T +++ ACS G + G ++ F S G +L
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA--LL 431
Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
+ Y D +F E E+ ++ V+W V+L + L ++R + R ++
Sbjct: 432 NLYAKCADIETALDYFLETEV--------ENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 31/229 (13%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ +HA +G D N L+ LYS+C + F++ D +WNA
Sbjct: 610 GQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNA------- 662
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
L+S ++G E+AL V+ +M+ EG + T S
Sbjct: 663 ------------------------LVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 698
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
KA++ +++ G++ H ++ K G D V NAL+S+YAKCG A F E+S NE
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 758
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
V++ A+++ +K EAL+ F MI V + V+L VL C+ G
Sbjct: 759 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 807
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +HA I + G +T +CN LI +Y+KC + A+ F ++ K+ SWNAI++A K
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 67 SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNE-GFVP 118
A FD+M NV V+ ++SA GL +K ++ + M++E G P
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 827
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 259/839 (30%), Positives = 413/839 (49%), Gaps = 136/839 (16%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK HA IL + FL N LI +YSKC +
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGS---------------------------- 89
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNG---LE--EKALSVYNKMSNEGFVPTHI 121
L +A ++FD+MP+R++VSWN++++A ++ +E ++A ++ + + + +
Sbjct: 90 ---LTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRM 146
Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
TL+ + K V HG KIGLD + +VA AL+++Y K G K +FEEM
Sbjct: 147 TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM 206
Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEM---------------FRLMIRK----------- 215
+ V + M+ + EA+++ RL+ R
Sbjct: 207 PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVK 266
Query: 216 --AVSIDSVSLSSVL----GVCAREGCG------------VESDV---------FAQSDN 248
A D+ S+S ++ G+ G VESDV +
Sbjct: 267 SFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAV 326
Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
K GQQVHC+ +KLG + L +SNSL++MY K A +F N+ ER ++SWN
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386
Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--------------------- 347
+IAG Q +A+ L ++ CG +PD+ T ++L A
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 348 --------------------CVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKE 387
C++ +I R FD + +WNAM++ Y+QS + +
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD------LVAWNAMMAGYTQSHDGHK 500
Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
+KLF M +G + D TLA + +C + + GKQVHA ++K+ +D +V+SG++
Sbjct: 501 TLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILD 560
Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
+Y KC A+ F IP D V W +MI+G N + AF F QMR + P +F+
Sbjct: 561 MYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
AT+ + + L++ QGRQ+HA K ND FVG++L++MY KCG I A F +
Sbjct: 621 IATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIE 680
Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
N WN M+ G AQ+G G E ++L+K M + G+KPD +TF+ +L+ACSHSGLV +
Sbjct: 681 MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYK 740
Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
SM D+G++P ++HY+C+ D LGRAG +AE LI+ M + ++ LL++CR+
Sbjct: 741 HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQ 800
Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
+ KR A +L L+P +S+ Y LL+N+Y++ +WD+++ R +M + + KDP +S
Sbjct: 801 GDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFS 859
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 151/561 (26%), Positives = 274/561 (48%), Gaps = 32/561 (5%)
Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
D+ G+ H ++ + ++ N L+S+Y+KCG +A VF++M + + V++ ++++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 195 GLAKTDRVV-----EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
A++ V +A +FR++ + V ++LS +L +C G S+ F
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF------ 167
Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
H K+G + D ++ +L+++Y K G + +V+F +P R VV WN+M
Sbjct: 168 ----------HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLM 217
Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG--REMFDSMPSP 367
+ Y + +AI+L S G P+E+T L+A + D G + + +
Sbjct: 218 LKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL--RLLARISGDDSDAGQVKSFANGNDAS 275
Query: 368 SVSSW---NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
SVS N LS Y S + +K F +M V+ D+ T ++L++ + L G+
Sbjct: 276 SVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQ 335
Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS 484
QVH +LK + V++ LI +Y K ++ A VF + E D++ WNS+IAG++ N
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 485 LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ-GRQVHAQIEKDGYVNDIFVG 543
L++EA F Q+ + + P Q++ +VL + + L +QVH K V+D FV
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS 455
Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
+ALI+ Y + + A F+ H + V WN M+ GY Q+ G + ++L+ M G +
Sbjct: 456 TALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 604 PDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEM 663
DD T + C ++ G ++ ++ + G + L + ++D + G A+
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 573
Query: 664 LIDEMPCKDDPVIWEVLLSSC 684
D +P DD V W ++S C
Sbjct: 574 AFDSIPVPDD-VAWTTMISGC 593
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/724 (32%), Positives = 381/724 (52%), Gaps = 54/724 (7%)
Query: 58 NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
+A++ K+ E AYK+F + NV WN +I+ +RN ++++M
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
P T +SV A +L + G+ VIK G + +++V A++ LYAKCG A+ V
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
F + P+ V++T M+SG K++ ALE+F+ M V I++ +++SV+ C R
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
E+ QVH K GF D ++ +L+ MY+K+GD+D +E +F +
Sbjct: 368 CEA----------------SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED 411
Query: 298 LPE---RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML--VACV--- 349
L + +++V NVMI + Q + KAI L RM G DE + ++L + C+
Sbjct: 412 LDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG 469
Query: 350 ---------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQS 382
+ G ++ ++F +P + W +M+S +++
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
+EAI LF EM G PD +TLA +L+ C++ L GK++H +L+ +
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
S L+ +YSKC +LA +V+ R+PELD V +S+I+G S + L + F+ F+ M +
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649
Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
F+ +++L + A S G QVHA I K G + VGS+L+ MY K G I +
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709
Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
F ++G + + W +I YAQ+G +EA+++Y M G KPD +TFV +L+ACSH GLV
Sbjct: 710 FSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLV 769
Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
+ NSM D+G+EP HY CM+D LGR+G EAE I+ M K D ++W LL+
Sbjct: 770 EESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLA 829
Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
+C++H V L K AA++ L+P ++ Y L+NI + +G WD++ R+LM + K+
Sbjct: 830 ACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKE 889
Query: 743 PAYS 746
P +S
Sbjct: 890 PGWS 893
Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 178/614 (28%), Positives = 291/614 (47%), Gaps = 60/614 (9%)
Query: 53 DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
D++ ++LS S + A KLFD +P+ +VVS N +IS ++ L E++L ++KM
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRR--CHGLVIKIGLDKNIYVANALLSLYAKCGW 170
GF I+ SV A +AL CH IK+G V +AL+ +++K
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCH--TIKMGYFFYEVVESALIDVFSKNLR 200
Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
+ A VF + N + +++G + ++F M DS + SSVL
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
CA + G+ V IK G E D+ + +++D+YAK G M
Sbjct: 261 CA----------------SLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAE 303
Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
A +FS +P SVVSW VM++GY + + A+E+ + M+ G E + T +++ AC R
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 351 -----------------------------------SGDIKTGREMFDSMPSPSVSSW-NA 374
SGDI ++F+ + + N
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNV 423
Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
M++S+SQS+ +AI+LF M G++ D ++ +LS + L GKQVH +LK+
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS---VLDCLNLGKQVHGYTLKSG 480
Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
+D V S L +YSKC E + ++F IP D CW SMI+G + EA F
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
+M + P + + A VL+ C+ S +G+++H + G + +GSAL+ MY KCG
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
+ ARQ +D + + V+ + +I GY+Q+G + L++DM+ SG D +IL
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660
Query: 615 ACSHSGLVDVGVEI 628
A + S +G ++
Sbjct: 661 AAALSDESSLGAQV 674
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 204/423 (48%), Gaps = 55/423 (13%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +H + L++GL D + + L LYSKC +
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS---------------------------- 500
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
LE +YKLF +P ++ W ++IS G +A+ ++++M ++G P TLA+V
Sbjct: 501 ---LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAV 557
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
++ + G+ HG ++ G+DK + + +AL+++Y+KCG K A V++ + E +
Sbjct: 558 LTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDP 617
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
V+ ++++SG ++ + + +FR M+ ++DS ++SS+L A ES +
Sbjct: 618 VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSD---ESSL---- 670
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
G QVH K+G + + +SLL MY+K G +D FS + +++W
Sbjct: 671 ---------GAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAW 721
Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
+IA Y Q ++ +A+++ MK GF+PD+VT + +L AC G ++ +SM
Sbjct: 722 TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVK 781
Query: 367 -----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
P + M+ + +S +EA M +KPD +L++C G +E
Sbjct: 782 DYGIEPENRHYVCMVDALGRSGRLREAESFINNMH---IKPDALVWGTLLAACKIHGEVE 838
Query: 422 SGK 424
GK
Sbjct: 839 LGK 841
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 249/786 (31%), Positives = 402/786 (51%), Gaps = 103/786 (13%)
Query: 9 LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
++H I+ GL DT+L N LI LYS+
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGG------------------------------ 94
Query: 69 DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVF 127
+ +A K+F++MPERN+VSW+ ++SA +G+ E++L V+ + P L+S
Sbjct: 95 -MVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153
Query: 128 KASTALLDVEHGR----RCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
+A + L GR + ++K G D+++YV L+ Y K G +A VF+ + E
Sbjct: 154 QACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE 211
Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA----REGCGVE 239
+ VT+T M+SG K R +L++F ++ V D LS+VL C+ EG
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG---- 267
Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
G+Q+H ++ G E D L N L+D Y K G + +A +F+ +P
Sbjct: 268 ----------------GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------- 348
++++SW +++GY Q +A+EL M G +PD ++L +C
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371
Query: 349 VRSGDIKT------------------------GREMFDSMPSPSVSSWNAMLSSYS---- 380
V + IK R++FD + V +NAM+ YS
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 381 QSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
Q E H EA+ +FR+M+FR ++P T +L + A++ L KQ+H K ++D +
Sbjct: 432 QWELH-EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIF 490
Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
S LI +YS C + + VF + D+V WNSM AG S + EA F +++ +
Sbjct: 491 AGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSR 550
Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
P +F+FA ++++ L+S G++ H Q+ K G + ++ +AL++MY KCG A
Sbjct: 551 ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610
Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
+ FD ++ V WN +I YA +G G +A+++ + M++ G++P+ ITFV +L+ACSH+G
Sbjct: 611 KAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAG 670
Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
LV+ G++ F M L G+EP +HY CM+ LGRAG ++A LI++MP K ++W L
Sbjct: 671 LVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL 729
Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
LS C NV LA+ AAE DPK+S +++L+NIY+S G W + + VRE M +V
Sbjct: 730 LSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVV 789
Query: 741 KDPAYS 746
K+P S
Sbjct: 790 KEPGRS 795
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 228/515 (44%), Gaps = 90/515 (17%)
Query: 6 AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
GK +HAHILR GL D L N LI+ Y KC +A LF+ MP+K+I SW +LS
Sbjct: 267 GGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS--- 323
Query: 66 KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
YK +N L ++A+ ++ MS G P +S
Sbjct: 324 -------GYK---------------------QNALHKEAMELFTSMSKFGLKPDMYACSS 355
Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
+ + +L + G + H IK L + YV N+L+ +YAKC A VF+ + +
Sbjct: 356 ILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAAD 415
Query: 186 EVTFTAMMSGLAKTD---RVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
V F AM+ G ++ + EAL +FR M + + ++ S+L A
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA---------- 465
Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
+ + S+ +HG L K G D+ ++L+D+Y+ + + ++F + +
Sbjct: 466 -SLTSLGLSKQIHG-----LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKD 519
Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM-- 360
+V WN M AGY Q+ ++ +A+ L ++ PDE T NM+ A ++ G+E
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHC 579
Query: 361 ---------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKE 387
FDS S V WN+++SSY+ K+
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKK 639
Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA--SHIDNYVASGL 445
A+++ +M G++P+ T +LS+C+ G++E G + L+ ++YV +
Sbjct: 640 ALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVC--M 697
Query: 446 IGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
+ + + R A + ++P + + W S+++G
Sbjct: 698 VSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 238/713 (33%), Positives = 381/713 (53%), Gaps = 72/713 (10%)
Query: 88 WNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
W +L+ + VR+ L +A+ Y M G P + ++ KA L D+E G++ H V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 148 KIGLD-KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
K G ++ VAN L++LY KCG VF+ +SE N+V++ +++S L ++ AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAR----EGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
E FR M+ + V S +L SV+ C+ EG + G+QVH
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL-----------------MMGKQVHAY 227
Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
++ G E + + N+L+ MY K G + S++V+ + R +V+WN +++ Q Q +A
Sbjct: 228 GLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 286
Query: 323 IELLQRMKSCGFEPDEVTSINMLVAC-----VRSG------------------------- 352
+E L+ M G EPDE T ++L AC +R+G
Sbjct: 287 LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVD 346
Query: 353 ------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ-FRGVKPDRT 405
+ +GR +FD M + WNAM++ YSQ+E+ KEA+ LF M+ G+ + T
Sbjct: 347 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 406
Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
T+A ++ +C G + +H +K D +V + L+ +YS+ + ++A R+F ++
Sbjct: 407 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-----------MYPTQFSFATVLSS 514
+ D+V WN+MI G + +A + +M+ E + P + T+L S
Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 526
Query: 515 CAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTW 574
CA LS+ +G+++HA K+ D+ VGSAL++MY KCG + +R+ FD + KN +TW
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 586
Query: 575 NEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQL 634
N +I Y +G G EA+ L + M+ GVKP+++TF+++ ACSHSG+VD G+ IF M+
Sbjct: 587 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 646
Query: 635 DHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK-DDPVIWEVLLSSCRLHANVRLA 693
D+GVEP DHY C++D LGRAG EA L++ MP + W LL + R+H N+ +
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIG 706
Query: 694 KRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
+ AA+ L +L+P ++ Y LLANIYSS G WD VR M E + K+P S
Sbjct: 707 EIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 163/615 (26%), Positives = 278/615 (45%), Gaps = 105/615 (17%)
Query: 7 GKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
GK +HAH+ + G D + N L+ LY KC
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG---------------------------- 147
Query: 66 KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
D YK+FD + ERN VSWN+LIS+L E AL + M +E P+ TL S
Sbjct: 148 ---DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204
Query: 126 VFKASTALLDVE---HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
V A + L E G++ H ++ G + N ++ N L+++Y K G + +
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFG 263
Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
+ VT+ ++S L + ++++EALE R M+ + V D ++SSVL C
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC----------- 312
Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
S + R G+++H +K G + + + ++L+DMY + S +F + +R
Sbjct: 313 ---SHLEMLRT--GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRS--------- 351
+ WN MIAGY Q +A+ L M +S G + T ++ ACVRS
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 352 --------------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
G I +F M + +WN M++ Y SE+H
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 386 KEAIKLFREMQ------FRG-----VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
++A+ L +MQ +G +KP+ TL IL SCAA+ L GK++HA ++K
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 547
Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
D V S L+ +Y+KC +++ +VF +IP+ +++ WN +I ++ EA +
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 607
Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV---NDIFVGSALIEMYC 551
M + P + +F +V ++C+ +G ++ ++ D V +D + + ++++
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY--ACVVDLLG 665
Query: 552 KCGDIYGARQFFDMM 566
+ G I A Q +MM
Sbjct: 666 RAGRIKEAYQLMNMM 680
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 65/408 (15%)
Query: 6 AGKLLHAHILRNGLFDD-TFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
GK LHA+ L+NG D+ +F+ + L+++Y C S + +FD M
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM--------------- 364
Query: 65 CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS-NEGFVPTHITL 123
FD R + WN +I+ +N +++AL ++ M + G + T+
Sbjct: 365 ------------FD----RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
A V A HG V+K GLD++ +V N L+ +Y++ G A+ +F +M +
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 468
Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLM-----------IRKAVSIDSVSLSSVLGVCA 232
+ VT+ M++G ++ +AL + M R ++ +S++L ++L CA
Sbjct: 469 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528
Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
S G+++H IK D+ + ++L+DMYAK G + +
Sbjct: 529 ----------------ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSG 352
+F +P+++V++WNV+I YG +AI+LL+ M G +P+EVT I++ AC SG
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 353 DIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
+ G +F M PS + ++ ++ KEA +L M
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 140/268 (52%), Gaps = 7/268 (2%)
Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
S S W +L S +S +EA+ + +M G+KPD +L + A + +E GKQ
Sbjct: 59 SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118
Query: 426 VHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL-SLN 483
+HA K +D+ VA+ L+ +Y KC +VF RI E + V WNS+I+ L S
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178
Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSS---FQGRQVHAQIEKDGYVNDI 540
++ A F+ M + P+ F+ +V+++C+ L G+QVHA + G +N
Sbjct: 179 KWEM-ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS- 236
Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIAS 600
F+ + L+ MY K G + ++ G++ VTWN ++ QN EA+ ++M+
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 601 GVKPDDITFVAILTACSHSGLVDVGVEI 628
GV+PD+ T ++L ACSH ++ G E+
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKEL 324
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 195/490 (39%), Gaps = 75/490 (15%)
Query: 10 LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
+H +++ GL D F+ N L+++YS+ A +F KM +D+ +WN +++ S+
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486
Query: 70 LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
E A L +M LE K V S P ITL ++ +
Sbjct: 487 HEDALLLLHKM-----------------QNLERK---VSKGASRVSLKPNSITLMTILPS 526
Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
AL + G+ H IK L ++ V +AL+ +YAKCG + + VF+++ + N +T+
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 586
Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQSDN 248
++ EA+++ R+M+ + V + V+ SV C+ G E +F
Sbjct: 587 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 646
Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN-----------------GDMDSA 291
+ C+ LG + + L++M ++ +++
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIG 706
Query: 292 EVIFSNLP--ERSVVSWNVMIAG-YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
E+ NL E +V S V++A Y KA E+ + MK G + S
Sbjct: 707 EIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSW------ 760
Query: 349 VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
I+ G E+ + S + LS Y ++ L+ M+ G PD
Sbjct: 761 -----IEHGDEVHKFVAGDSSHPQSEKLSGYLET--------LWERMRKEGYVPD----- 802
Query: 409 IILSSCAAMGILESGKQV----HAASLKTASHIDNYVASGLIGIYSK---CQRNELAERV 461
+SC + E K++ H+ L A I N +I + C LA +
Sbjct: 803 ---TSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKF 859
Query: 462 FHRIPELDIV 471
+I + +I+
Sbjct: 860 ISKIVDREII 869
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/730 (32%), Positives = 370/730 (50%), Gaps = 65/730 (8%)
Query: 35 KCNNTHSAQHLFDKMPHKDIYSWNA---ILSAQCKSDDLEFAYKLFDEMP--ERNVVSWN 89
KC + + K+ I + N ++S L A L P + V WN
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 90 NLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI 149
+LI + NG K L ++ M + + P + T VFKA + V G H L +
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 150 GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
G N++V NAL+++Y++C A VF+EMS + V++ +++ AK + ALEMF
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 210 RLMIRK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGF 268
M + D+++L +VL CA G + G+Q+HC +
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLG----------------THSLGKQLHCFAVTSEM 260
Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
++ + N L+DMYAK G MD A +FSN+ + VVSWN M+AGY Q + A+ L ++
Sbjct: 261 IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEK 320
Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
M+ + D VT W+A +S Y+Q EA
Sbjct: 321 MQEEKIKMDVVT-------------------------------WSAAISGYAQRGLGYEA 349
Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI-------DNYV 441
+ + R+M G+KP+ TL +LS CA++G L GK++H ++K + +N V
Sbjct: 350 LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409
Query: 442 ASGLIGIYSKCQRNELAERVFHRI--PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
+ LI +Y+KC++ + A +F + E D+V W MI G S + +A +M +
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 500 --EMYPTQFSFATVLSSCAKLSSSFQGRQVHA-QIEKDGYVNDIFVGSALIEMYCKCGDI 556
+ P F+ + L +CA L++ G+Q+HA + +FV + LI+MY KCG I
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSI 529
Query: 557 YGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
AR FD M KN VTW ++ GY +GYG+EA+ ++ +M G K D +T + +L AC
Sbjct: 530 SDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYAC 589
Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
SHSG++D G+E FN M+ GV P +HY C++D LGRAG + A LI+EMP + PV+
Sbjct: 590 SHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVV 649
Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSE 736
W LS CR+H V L + AAE++ L + Y+LL+N+Y++ GRW D+ +R LM
Sbjct: 650 WVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRH 709
Query: 737 NCIVKDPAYS 746
+ K P S
Sbjct: 710 KGVKKRPGCS 719
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 142/548 (25%), Positives = 243/548 (44%), Gaps = 114/548 (20%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ HA L G + F+ N L+ +YS+C + A+ +FD+M D+ SWN+I
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSI------ 199
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLAS 125
I + + G + AL ++++M+NE G P +ITL +
Sbjct: 200 -------------------------IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVN 234
Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
V +L G++ H + + +N++V N L+ +YAKCG A VF MS +
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
V++ AM++G ++ R +A+ +F M + + +D V+ S+ + A+ G G E+
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA--LGV 352
Query: 246 SDNKFSRNV---------------------HGQQVHCLTIKLGFEADLH---------LS 275
S + HG+++HC IK + DL +
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--YPIDLRKNGHGDENMVI 410
Query: 276 NSLLDMYAKNGDMDSAEVIFSNL--PERSVVSWNVMIAGYGQKYQSTKAIELLQRM--KS 331
N L+DMYAK +D+A +F +L ER VV+W VMI GY Q + KA+ELL M +
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 332 CGFEPDEVTSINMLVAC------------------------------------VRSGDIK 355
C P+ T LVAC + G I
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530
Query: 356 TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA 415
R +FD+M + + +W ++++ Y +EA+ +F EM+ G K D TL ++L +C+
Sbjct: 531 DARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590
Query: 416 AMGILESGKQVHAASLKTASHI----DNYVASGLIGIYSKCQRNELAERVFHRIP-ELDI 470
G+++ G + + +KT + ++Y L+ + + R A R+ +P E
Sbjct: 591 HSGMIDQGME-YFNRMKTVFGVSPGPEHYAC--LVDLLGRAGRLNAALRLIEEMPMEPPP 647
Query: 471 VCWNSMIA 478
V W + ++
Sbjct: 648 VVWVAFLS 655
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 216/458 (47%), Gaps = 40/458 (8%)
Query: 3 AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
H GK LH + + + + F+ N L+++Y+KC A +F M KD+ SWNA+++
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 63 AQCKSDDLEFAYKLFDEMPER----NVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
+ E A +LF++M E +VV+W+ IS + GL +AL V +M + G P
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIK--IGLDKNIY-----VANALLSLYAKCGWT 171
+TL SV ++ + HG+ H IK I L KN + V N L+ +YAKC
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 172 KHAVPVFEEMS--EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI--DSVSLSSV 227
A +F+ +S E + VT+T M+ G ++ +ALE+ M + ++ ++S
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA-DLHLSNSLLDMYAKNG 286
L CA + G+Q+H ++ A L +SN L+DMYAK G
Sbjct: 484 LVACA----------------SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCG 527
Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV 346
+ A ++F N+ ++ V+W ++ GYG +A+ + M+ GF+ D VT + +L
Sbjct: 528 SISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLY 587
Query: 347 ACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVK 401
AC SG I G E F+ M SP + ++ ++ A++L EM ++
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMP---ME 644
Query: 402 PDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
P LS C G +E G+ + AS+ D
Sbjct: 645 PPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDG 682
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/772 (30%), Positives = 394/772 (51%), Gaps = 92/772 (11%)
Query: 19 LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFD 78
L +D LC R+I +Y+ C + DD F +FD
Sbjct: 116 LRNDDVLCTRIITMYAMCGS----------------------------PDDSRF---VFD 144
Query: 79 EMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKASTALLDVE 137
+ +N+ WN +IS+ RN L ++ L + +M S +P H T V KA + DV
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG 204
Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
G HGLV+K GL ++++V NAL+S Y G+ A+ +F+ M E N V++ +M+ +
Sbjct: 205 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 198 KTDRVVEALEMFRLMIRK----AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
E+ + M+ + A D +L +VL VCARE R
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE-----------------RE 307
Query: 254 VH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
+ G+ VH +KL + +L L+N+L+DMY+K G + +A++IF ++VVSWN M+ G
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 313 YGQKYQSTKAIELLQRMKSCG--FEPDEVTSINMLVAC---------------------- 348
+ + + ++L++M + G + DEVT +N + C
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427
Query: 349 -------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
+ G + + +F + S +V+SWNA++ ++QS + + ++ +M
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 487
Query: 396 QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRN 455
+ G+ PD T+ +LS+C+ + L GK+VH ++ D +V ++ +Y C
Sbjct: 488 KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 547
Query: 456 ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
+ +F + + +V WN++I G N A F+QM + S V +C
Sbjct: 548 CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607
Query: 516 AKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWN 575
+ L S GR+ HA K +D F+ +LI+MY K G I + + F+ + K+T +WN
Sbjct: 608 SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 667
Query: 576 EMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLD 635
MI GY +G EA++L+++M +G PDD+TF+ +LTAC+HSGL+ G+ + M+
Sbjct: 668 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727
Query: 636 HGVEPILDHYTCMIDCLGRAGHFHEA-EMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAK 694
G++P L HY C+ID LGRAG +A ++ +EM + D IW+ LLSSCR+H N+ + +
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787
Query: 695 RAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
+ A +LF L+P+ Y LL+N+Y+ LG+W+D+R VR+ M+E + KD S
Sbjct: 788 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCS 839
Score = 211 bits (536), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 164/636 (25%), Positives = 284/636 (44%), Gaps = 65/636 (10%)
Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI-KIGLDKNIYVANALLSLYAKCGW 170
S++ F+ L + +AS D+E GR+ H LV L + + ++++YA CG
Sbjct: 76 SSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGS 135
Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
+ VF+ + N + A++S ++ + E LE F MI S +
Sbjct: 136 PDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI----STTDLLPDHFTYP 191
Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
C + C SDV G VH L +K G D+ + N+L+ Y +G +
Sbjct: 192 CVIKACAGMSDVGI-----------GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD 240
Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM----KSCGFEPDEVTSINMLV 346
A +F +PER++VSWN MI + S ++ LL M F PD T + +L
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300
Query: 347 ACVRSGDIKTGRE-----------------------------------MFDSMPSPSVSS 371
C R +I G+ +F + +V S
Sbjct: 301 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360
Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRG--VKPDRTTLAIILSSCAAMGILESGKQVHAA 429
WN M+ +S + + R+M G VK D T+ + C L S K++H
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420
Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNS---LD 486
SLK + VA+ + Y+KC A+RVFH I + WN++I G + ++ L
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480
Query: 487 IEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSAL 546
++A + QM+ + + P F+ ++LS+C+KL S G++VH I ++ D+FV ++
Sbjct: 481 LDAHL---QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 537
Query: 547 IEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDD 606
+ +Y CG++ + FD M K+ V+WN +I GY QNG+ D A+ +++ M+ G++
Sbjct: 538 LSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 597
Query: 607 ITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLID 666
I+ + + ACS + +G E ++ L H +E +ID + G ++ + +
Sbjct: 598 ISMMPVFGACSLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN 656
Query: 667 EMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
+ K W ++ +H + A + EE+ R
Sbjct: 657 GLKEKSTAS-WNAMIMGYGIHGLAKEAIKLFEEMQR 691
Score = 202 bits (515), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 244/546 (44%), Gaps = 80/546 (14%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G +H +++ GL +D F+ N L+ Y A LFD MP +++ SWN+++
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
+ E ++ L EM E N + F+P TL +V
Sbjct: 266 NGFSEESFLLLGEMMEEN---------------------------GDGAFMPDVATLVTV 298
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
++ G+ HG +K+ LDK + + NAL+ +Y+KCG +A +F+ + N
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKA--VSIDSVSLSSVLGVCAREGCGVESDVFA 244
V++ M+ G + ++ R M+ V D V++ + + VC E F
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES-------FL 411
Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
S +++HC ++K F + ++N+ + YAK G + A+ +F + ++V
Sbjct: 412 PSL---------KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 462
Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----- 359
SWN +I G+ Q +++ +MK G PD T ++L AC + ++ G+E
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 360 ------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
+FD+M S+ SWN +++ Y Q+ A+
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
+FR+M G++ ++ + +C+ + L G++ HA +LK D ++A LI +Y
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642
Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
+K + +VF+ + E WN+MI G ++ L EA F++M++ P +F
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 510 TVLSSC 515
VL++C
Sbjct: 703 GVLTAC 708
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 208/441 (47%), Gaps = 30/441 (6%)
Query: 58 NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
NA +++ K L +A ++F + + V SWN LI ++ +L + +M G +
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493
Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
P T+ S+ A + L + G+ HG +I+ L+++++V ++LSLY CG +
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
F+ M + + V++ +++G + AL +FR M+ + + +S+ V G C+
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL---- 609
Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
G++ H +K E D ++ SL+DMYAKNG + + +F+
Sbjct: 610 ------------LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNG 657
Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
L E+S SWN MI GYG + +AI+L + M+ G PD++T + +L AC SG I G
Sbjct: 658 LKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 717
Query: 358 REMFDSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
D M S P++ + ++ ++ +A+++ E + D +LS
Sbjct: 718 LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE--EADVGIWKSLLS 775
Query: 413 SCAAMGILESGKQVHAASLK-TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
SC LE G++V A + +NYV L +Y+ + E +V R+ E+ +
Sbjct: 776 SCRIHQNLEMGEKVAAKLFELEPEKPENYVL--LSNLYAGLGKWEDVRKVRQRMNEMSL- 832
Query: 472 CWNSMIAGLSLNSLDIEAFMF 492
AG S L+ + F F
Sbjct: 833 ---RKDAGCSWIELNRKVFSF 850
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 193/457 (42%), Gaps = 90/457 (19%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +H ++ L + L N L+++YSKC +AQ +F +K++ SWN ++
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKA--LSVYNKMS---NEGFVPTHI 121
D + + +M + G + KA +++ N + +E F+P+
Sbjct: 371 EGDTHGTFDVLRQM---------------LAGGEDVKADEVTILNAVPVCFHESFLPSL- 414
Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
+ H +K N VANA ++ YAKCG +A VF +
Sbjct: 415 ------------------KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 456
Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
++ A++ G A+++ +L+ M + DS ++ S+L C+
Sbjct: 457 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS--------- 507
Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
K G++VH I+ E DL + S+L +Y G++ + + +F + ++
Sbjct: 508 -------KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM-----KSCG----------------------- 333
S+VSWN +I GY Q +A+ + ++M + CG
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 334 -------FEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
E D + +++ ++G I ++F+ + S +SWNAM+ Y K
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680
Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
EAIKLF EMQ G PD T +L++C G++ G
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 717
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 154/356 (43%), Gaps = 33/356 (9%)
Query: 11 HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQH----LFDKMPHKDIYSWNAILSAQCK 66
H + +GL D+F L+ SK + + + +D++ + ++LS
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
+L LFD M ++++VSWN +I+ ++NG ++AL V+ +M G I++ V
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
F A + L + GR H +K L+ + ++A +L+ +YAK G + VF + E +
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 663
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
++ AM+ G EA+++F M R + D ++ VL C G E Q
Sbjct: 664 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ 723
Query: 246 SDNKFSRNVHGQQVHCLTIKLGF-----------------EADLHLSNSLLDMYAKNGDM 288
+ F + + C+ LG EAD+ + SLL + ++
Sbjct: 724 MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNL 783
Query: 289 DSAEVIFSNL-------PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
+ E + + L PE V+ N + AG G K++ + + QRM D
Sbjct: 784 EMGEKVAAKLFELEPEKPENYVLLSN-LYAGLG-KWEDVRKVR--QRMNEMSLRKD 835
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/677 (32%), Positives = 358/677 (52%), Gaps = 61/677 (9%)
Query: 111 MSNEGFVPTHITLASVFKASTALL-----DVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
+S ++P A+V++ ALL ++ R+ LV K GL + + L+SL+
Sbjct: 25 LSERNYIP-----ANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLF 79
Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
+ G A VFE + V + M+ G AK + +AL+ F M V + +
Sbjct: 80 CRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFT 139
Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
+L VC E E V G+++H L +K GF DL L +MYAK
Sbjct: 140 YLLKVCGDEA---ELRV-------------GKEIHGLLVKSGFSLDLFAMTGLENMYAKC 183
Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
++ A +F +PER +VSWN ++AGY Q + A+E+++ M +P +T +++L
Sbjct: 184 RQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVL 243
Query: 346 VAC-----------------------------------VRSGDIKTGREMFDSMPSPSVS 370
A + G ++T R++FD M +V
Sbjct: 244 PAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVV 303
Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
SWN+M+ +Y Q+EN KEA+ +F++M GVKP ++ L +CA +G LE G+ +H S
Sbjct: 304 SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363
Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
++ + V + LI +Y KC+ + A +F ++ +V WN+MI G + N I+A
Sbjct: 364 VELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDAL 423
Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
+F QMR + P F++ +V+++ A+LS + + +H + + ++FV +AL++MY
Sbjct: 424 NYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMY 483
Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
KCG I AR FDMM ++ TWN MI GY +G+G A+ L+++M +KP+ +TF+
Sbjct: 484 AKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFL 543
Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
++++ACSHSGLV+ G++ F M+ ++ +E +DHY M+D LGRAG +EA I +MP
Sbjct: 544 SVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPV 603
Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAV 730
K ++ +L +C++H NV A++AAE LF L+P + + LLANIY + W+ + V
Sbjct: 604 KPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQV 663
Query: 731 RELMSENCIVKDPAYSL 747
R M + K P S+
Sbjct: 664 RVSMLRQGLRKTPGCSM 680
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 214/452 (47%), Gaps = 82/452 (18%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +H ++++G D F L +Y+KC + A+
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR----------------------- 190
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
K+FD MPER++VSWN +++ +NG+ AL + M E P+ IT+ SV
Sbjct: 191 --------KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSV 242
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
A +AL + G+ HG ++ G D + ++ AL+ +YAKCG + A +F+ M E N
Sbjct: 243 LPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNV 302
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
V++ +M+ + + EA+ +F+ M+ + V VS+ L CA G
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG----------- 351
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
R G+ +H L+++LG + ++ + NSL+ MY K ++D+A +F L R++VSW
Sbjct: 352 --DLER---GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406
Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA------------------- 347
N MI G+ Q + A+ +M+S +PD T ++++ A
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 348 -CV---------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
C+ + G I R +FD M V++WNAM+ Y K A++L
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526
Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
F EMQ +KP+ T ++S+C+ G++E+G
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 129/539 (23%), Positives = 244/539 (45%), Gaps = 84/539 (15%)
Query: 14 ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFA 73
+ +NGL+ + F +L+ L+ + + A +F+ + K ++ +L K DL+
Sbjct: 60 VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLD-- 117
Query: 74 YKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTAL 133
KAL + +M + P + K
Sbjct: 118 -----------------------------KALQFFVRMRYDDVEPVVYNFTYLLKVCGDE 148
Query: 134 LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMM 193
++ G+ HGL++K G +++ L ++YAKC A VF+ M E + V++ ++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL-GVCAREGCGVESDVFAQSDNKFSR 252
+G ++ ALEM + M + + +++ SVL V A V
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV-------------- 254
Query: 253 NVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAG 312
G+++H ++ GF++ +++S +L+DMYAK G +++A +F + ER+VVSWN MI
Sbjct: 255 ---GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 313 YGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------------- 358
Y Q +A+ + Q+M G +P +V+ + L AC GD++ GR
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 359 ---------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
MF + S ++ SWNAM+ ++Q+ +A+ F +M+
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 398 RGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL 457
R VKPD T ++++ A + I K +H +++ + +V + L+ +Y+KC +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491
Query: 458 AERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
A +F + E + WN+MI G + A F++M++ + P +F +V+S+C+
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 550
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 201/413 (48%), Gaps = 55/413 (13%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +H + +R+G + L+++Y+KC +
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGS---------------------------- 286
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
LE A +LFD M ERNVVSWN++I A V+N ++A+ ++ KM +EG PT +++
Sbjct: 287 ---LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
A L D+E GR H L +++GLD+N+ V N+L+S+Y KC A +F ++
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
V++ AM+ G A+ R ++AL F M + V D+ + SV+ A
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA-------------- 449
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
+ S H + +H + ++ + ++ ++ +L+DMYAK G + A +IF + ER V +W
Sbjct: 450 --ELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW 507
Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS 366
N MI GYG A+EL + M+ +P+ VT ++++ AC SG ++ G + F M
Sbjct: 508 NAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKE 567
Query: 367 P-----SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
S+ + AM+ ++ EA +M VKP +L +C
Sbjct: 568 NYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP---VKPAVNVYGAMLGAC 617
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 40/206 (19%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
K +H ++R+ L + F+ L+++Y+KC AI+ A+
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCG---------------------AIMIARL- 494
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
+FD M ER+V +WN +I +G + AL ++ +M P +T SV
Sbjct: 495 ---------IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 127 FKASTALLDVEHGRRCHGLV-----IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
A + VE G +C ++ I++ +D A++ L + G A +M
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDH----YGAMVDLLGRAGRLNEAWDFIMQM 601
Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALE 207
V M G + + V E
Sbjct: 602 PVKPAVNVYGAMLGACQIHKNVNFAE 627
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/634 (33%), Positives = 339/634 (53%), Gaps = 56/634 (8%)
Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM 212
KN N ++S + K G A +F+ M + VT+T +M A+ EA ++FR M
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 213 IRKAVSI--DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
R + D V+ +++L C ++ +N GQ VH +KLGF+
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGC---------------NDAVPQNAVGQ-VHAFAVKLGFDT 180
Query: 271 D--LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
+ L +SN LL Y + +D A V+F +PE+ V++N +I GY + T++I L +
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLK 240
Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTG------------------------------- 357
M+ G +P + T +L A V D G
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR 300
Query: 358 ----REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
R +FD MP S+N ++SSYSQ++ ++ ++ FREMQ G A +LS
Sbjct: 301 VLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360
Query: 414 CAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCW 473
A + L+ G+Q+H +L + +V + L+ +Y+KC+ E AE +F +P+ V W
Sbjct: 361 AANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSW 420
Query: 474 NSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
++I+G L F +MR + + Q +FATVL + A +S G+Q+HA I +
Sbjct: 421 TALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIR 480
Query: 534 DGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRL 593
G + ++F GS L++MY KCG I A Q F+ M +N V+WN +I +A NG G+ A+
Sbjct: 481 SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGA 540
Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
+ MI SG++PD ++ + +LTACSH G V+ G E F +M +G+ P HY CM+D LG
Sbjct: 541 FAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLG 600
Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYS 712
R G F EAE L+DEMP + D ++W +L++CR+H N LA+RAAE+LF ++ +++A Y
Sbjct: 601 RNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYV 660
Query: 713 LLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
++NIY++ G W+ +R V++ M E I K PAYS
Sbjct: 661 SMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYS 694
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 163/653 (24%), Positives = 289/653 (44%), Gaps = 98/653 (15%)
Query: 8 KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
+ + A I++ G DT N ++E + +A+ ++D+MPHK+ S N ++S K+
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 68 DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM--SNEGFVPTHITLAS 125
D+ A LFD MP+R VV+W L+ RN ++A ++ +M S+ +P H+T +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIY--VANALLSLYAKCGWTKHAVPVFEEMSE 183
+ + + H +K+G D N + V+N LL Y + A +FEE+ E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
+ VTF +++G K E++ +F M + + S VL G+ F
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV----GLHD--F 266
Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
A GQQ+H L++ GF D + N +LD Y+K+ + ++F +PE
Sbjct: 267 AL----------GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDF 316
Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
VS+NV+I+ Y Q Q ++ + M+ GF+ ML ++ GR++
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
F S+P + SW A++S Y Q H
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
+KLF +M+ ++ D++T A +L + A+ L GKQ+HA +++ + + + SGL+ +
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
Y+KC + A +VF +P+ + V WN++I+ + N A F +M ++ + P S
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556
Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
VL++C+ CG + ++F M
Sbjct: 557 LGVLTACS-----------------------------------HCGFVEQGTEYFQAMSP 581
Query: 569 KNTVTWNE-----MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
+T + M+ +NG EA +L +M +PD+I + ++L AC
Sbjct: 582 IYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNAC 631
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 149/616 (24%), Positives = 265/616 (43%), Gaps = 102/616 (16%)
Query: 46 FDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKAL 105
FD P + N +L + C+ L+ A LF+E+PE++ V++N LI+ ++GL +++
Sbjct: 178 FDTNPFLTVS--NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 106 SVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLY 165
++ KM G P+ T + V KA L D G++ H L + G ++ V N +L Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 166 AKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLS 225
+K +F+EM E + V++ ++S ++ D+ +L FR M + +
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA 355
Query: 226 SVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKN 285
++L + A S G+Q+HC + ++ LH+ NSL+DMYAK
Sbjct: 356 TMLSIAA----------------NLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC 399
Query: 286 GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINML 345
+ AE+IF +LP+R+ VSW +I+GY QK ++L +M+ D+ T +L
Sbjct: 400 EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVL 459
Query: 346 VAC----------------VRSGD-------------------IKTGREMFDSMPSPSVS 370
A +RSG+ IK ++F+ MP +
Sbjct: 460 KASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 519
Query: 371 SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAAS 430
SWNA++S+++ + + + AI F +M G++PD ++ +L++C+ G +E G + A
Sbjct: 520 SWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQA- 578
Query: 431 LKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAF 490
S + GI K + H LD++ N A
Sbjct: 579 -----------MSPIYGITPKKK---------HYACMLDLLGRNGRFAEAE--------- 609
Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
K M + P + +++VL++C + + ++ + D ++ +Y
Sbjct: 610 ---KLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIY 666
Query: 551 CKCGDIYGARQFFDMMHGKN-----TVTW---NEMIHGYAQNGY----GDEAVRLYKDMI 598
G+ R M + +W N IH ++ N GDE VR ++
Sbjct: 667 AAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELT 726
Query: 599 A----SGVKPDDITFV 610
A G KPD + V
Sbjct: 727 AEIEREGYKPDTSSVV 742
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK LHA I+R+G ++ F + L+++Y+KC + A +F++MP ++ SWNA++SA
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHAD 530
Query: 67 SDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMS 112
+ D E A F +M E + VS +++A G E+ + MS
Sbjct: 531 NGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS 580
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/615 (34%), Positives = 336/615 (54%), Gaps = 62/615 (10%)
Query: 140 RRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH------AVPVFEEMSEPNEVTFTAMM 193
R H +IKIGL Y + L+ C + H A+ VF+ + EPN + + M
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEF---CILSPHFEGLPYAISVFKTIQEPNLLIWNTMF 106
Query: 194 SGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRN 253
G A + V AL+++ MI + +S + VL CA+ S F +
Sbjct: 107 RGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK------SKAFKE-------- 152
Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY 313
GQQ+H +KLG + DL++ SL+ MY +NG ++ A +F P R VVS+ +I GY
Sbjct: 153 --GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 314 GQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWN 373
+ G I+ +++FD +P V SWN
Sbjct: 211 ASR-----------------------------------GYIENAQKLFDEIPVKDVVSWN 235
Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT 433
AM+S Y+++ N+KEA++LF++M V+PD +T+ ++S+CA G +E G+QVH
Sbjct: 236 AMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDH 295
Query: 434 ASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFF 493
+ + + LI +YSKC E A +F R+P D++ WN++I G + +L EA + F
Sbjct: 296 GFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 494 KQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK--DGYVNDIFVGSALIEMYC 551
++M ++ P + ++L +CA L + GR +H I+K G N + ++LI+MY
Sbjct: 356 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 415
Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
KCGDI A Q F+ + K+ +WN MI G+A +G D + L+ M G++PDDITFV
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVG 475
Query: 612 ILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCK 671
+L+ACSHSG++D+G IF +M D+ + P L+HY CMID LG +G F EAE +I+ M +
Sbjct: 476 LLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEME 535
Query: 672 DDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVR 731
D VIW LL +C++H NV L + AE L +++P+N Y LL+NIY+S GRW+++ R
Sbjct: 536 PDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTR 595
Query: 732 ELMSENCIVKDPAYS 746
L+++ + K P S
Sbjct: 596 ALLNDKGMKKVPGCS 610
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 233/467 (49%), Gaps = 30/467 (6%)
Query: 2 KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
KA G+ +H H+L+ G D ++ LI +Y + A +FDK PH+D+ S+ A++
Sbjct: 148 KAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALI 207
Query: 62 SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
+E A KLFDE+P ++VVSWN +IS G ++AL ++ M P
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
T+ +V A +E GR+ H + G N+ + NAL+ LY+KCG + A +FE +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
+ +++ ++ G + EAL +F+ M+R + + V++ S+L CA G D
Sbjct: 328 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA---ID 384
Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKL--GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
+ G+ +H K G L SL+DMYAK GD+++A +F+++
Sbjct: 385 I-------------GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
+S+ SWN MI G+ ++ + +L RM+ G +PD++T + +L AC SG + GR
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
Query: 360 MFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
+F +M +P + + M+ S KEA ++ M+ ++PD +L +C
Sbjct: 492 IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME---MEPDGVIWCSLLKAC 548
Query: 415 AAMGILESGKQVHAASLKT-ASHIDNYVASGLIGIYSKCQR-NELAE 459
G +E G+ +K + +YV L IY+ R NE+A+
Sbjct: 549 KMHGNVELGESFAENLIKIEPENPGSYVL--LSNIYASAGRWNEVAK 593
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 220/487 (45%), Gaps = 112/487 (22%)
Query: 8 KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
+++HA +++ GL + + ++LIE ILS
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEF--------------------------CILSPHF-- 81
Query: 68 DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
+ L +A +F + E N++ WN + + AL +Y M + G +P T V
Sbjct: 82 EGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 141
Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSL----------------------- 164
K+ + G++ HG V+K+G D ++YV +L+S+
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV 201
Query: 165 --------YAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKA 216
YA G+ ++A +F+E+ + V++ AM+SG A+T EALE+F+ M++
Sbjct: 202 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 261
Query: 217 VSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSN 276
V D ++ +V+ CA+ G +E G+QVH GF ++L + N
Sbjct: 262 VRPDESTMVTVVSACAQSG-SIEL---------------GRQVHLWIDDHGFGSNLKIVN 305
Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEP 336
+L+D+Y+K G++++A +F LP + V+SWN +I GY +A+ L Q M G P
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365
Query: 337 DEVTSINMLVAC-------------------------------------VRSGDIKTGRE 359
++VT +++L AC + GDI+ +
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 425
Query: 360 MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
+F+S+ S+SSWNAM+ ++ + LF M+ G++PD T +LS+C+ G+
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485
Query: 420 LESGKQV 426
L+ G+ +
Sbjct: 486 LDLGRHI 492
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 91/226 (40%), Gaps = 41/226 (18%)
Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG---ARQFFDMM 566
++L +C L S R +HAQ+ K G N + S LIE G A F +
Sbjct: 38 SLLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
N + WN M G+A + A++LY MI+ G+ P+ TF +L +C+ S G
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 627 EIFN------------------SMQLDHG----VEPILDH--------YTCMIDCLGRAG 656
+I SM + +G + D YT +I G
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
+ A+ L DE+P K D V W ++S N + A ELF+
Sbjct: 215 YIENAQKLFDEIPVK-DVVSWNAMISGYAETGNY----KEALELFK 255
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/702 (31%), Positives = 361/702 (51%), Gaps = 56/702 (7%)
Query: 82 ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRR 141
+R+V N + +G E A+ + P TL SV + ++ G+
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 142 CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDR 201
+ G + + + L +Y CG K A VF+E+ + + +M+ LAK+
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 202 VVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHG-QQVH 260
++ +F+ M+ V +DS + S V S F+ R+VHG +Q+H
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCV------------SKSFSSL-----RSVHGGEQLH 218
Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
+K GF + NSL+ Y KN +DSA +F + ER V+SWN +I GY +
Sbjct: 219 GFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278
Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRS----------------------------- 351
K + + +M G E D T +++ C S
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 352 ------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
GD+ + + +F M SV S+ +M++ Y++ EA+KLF EM+ G+ PD
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
T+ +L+ CA +L+ GK+VH + D +V++ L+ +Y+KC + AE VF +
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 458
Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY-PTQFSFATVLSSCAKLSSSFQG 524
DI+ WN++I G S N EA F + + + + P + + A VL +CA LS+ +G
Sbjct: 459 RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518
Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
R++H I ++GY +D V ++L++MY KCG + A FD + K+ V+W MI GY +
Sbjct: 519 REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMH 578
Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
G+G EA+ L+ M +G++ D+I+FV++L ACSHSGLVD G FN M+ + +EP ++H
Sbjct: 579 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 638
Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
Y C++D L R G +A I+ MP D IW LL CR+H +V+LA++ AE++F L+
Sbjct: 639 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 698
Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
P+N+ Y L+ANIY+ +W+ ++ +R+ + + + K+P S
Sbjct: 699 PENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/551 (26%), Positives = 261/551 (47%), Gaps = 56/551 (10%)
Query: 69 DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
DL+ A ++FDE+ + WN L++ L ++G ++ ++ KM + G T + V K
Sbjct: 144 DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
+ ++L V G + HG ++K G + V N+L++ Y K A VF+EM+E + ++
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
+ ++++G + L +F M+ + ID ++ SV CA
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD--------------- 308
Query: 249 KFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
SR + G+ VH + +K F + N+LLDMY+K GD+DSA+ +F + +RSVVS+
Sbjct: 309 --SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYT 366
Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR----------------- 350
MIAGY ++ + +A++L + M+ G PD T +L C R
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 426
Query: 351 ------------------SGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
G ++ +F M + SWN ++ YS++ EA+ LF
Sbjct: 427 DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF 486
Query: 393 R-EMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
++ + PD T+A +L +CA++ + G+++H ++ D +VA+ L+ +Y+K
Sbjct: 487 NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 546
Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
C LA +F I D+V W MIAG ++ EA F QMRQ + + SF ++
Sbjct: 547 CGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMMH-GK 569
L +C+ +G + + + + A +++M + GD+ A +F + M
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP 666
Query: 570 NTVTWNEMIHG 580
+ W ++ G
Sbjct: 667 DATIWGALLCG 677
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 209/456 (45%), Gaps = 87/456 (19%)
Query: 6 AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
G+ LH IL++G + + N L+ Y K SA+
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSAR---------------------- 250
Query: 66 KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
K+FDEM ER+V+SWN++I+ V NGL EK LSV+ +M G T+ S
Sbjct: 251 ---------KVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
VF + GR H + +K + N LL +Y+KCG A VF EMS+ +
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
V++T+M++G A+ EA+++F M + +S D ++++VL CAR
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR------------ 409
Query: 246 SDNKFSRNVHGQQVHCLTIK--LGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
+ G++VH + LGF D+ +SN+L+DMYAK G M AE++FS + + +
Sbjct: 410 ----YRLLDEGKRVHEWIKENDLGF--DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 304 VSWNVMIAGYGQKYQSTKAIELLQ-RMKSCGFEPDEVTSINMLVACVRSGDIKTGRE--- 359
+SWN +I GY + + +A+ L ++ F PDE T +L AC GRE
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
+FD + S + SW M++ Y KE
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
AI LF +M+ G++ D + +L +C+ G+++ G
Sbjct: 584 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 239/505 (47%), Gaps = 71/505 (14%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ +H+ ++ + CN L+++YSKC + SA+ +F +M + + S+ ++++ +
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
A KLF+EM E EG P T+ +V
Sbjct: 375 EGLAGEAVKLFEEMEE-------------------------------EGISPDVYTVTAV 403
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
++ G+R H + + L +I+V+NAL+ +YAKCG + A VF EM +
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMI-RKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
+++ ++ G +K EAL +F L++ K S D +++ VL CA
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA------------- 510
Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
S + F + G+++H ++ G+ +D H++NSL+DMYAK G + A ++F ++ + +VS
Sbjct: 511 SLSAFDK---GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
W VMIAGYG +AI L +M+ G E DE++ +++L AC SG + G F+ M
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
P+V + ++ +++ + IK +R ++ + PD T +L C +
Sbjct: 628 HECKIEPTVEHYACIVDMLART---GDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684
Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDI-----VCW-- 473
+ ++V + Y + IY++ ++ E +R+ RI + + W
Sbjct: 685 KLAEKVAEKVFELEPENTGYYVL-MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
Query: 474 -----NSMIAGLSLN--SLDIEAFM 491
N +AG S N + +IEAF+
Sbjct: 744 IKGRVNIFVAGDSSNPETENIEAFL 768
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 225/717 (31%), Positives = 366/717 (51%), Gaps = 57/717 (7%)
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
S L A+ LFD+ P R+ S+ +L+ R+G ++A ++ + G +SV
Sbjct: 40 SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSV 99
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
K S L D GR+ H IK G ++ V +L+ Y K K VF+EM E N
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
VT+T ++SG A+ E L +F M + +S + ++ LGV A EG G
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG-------- 211
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
G QVH + +K G + + +SNSL+++Y K G++ A ++F +SVV+W
Sbjct: 212 --------RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTW 263
Query: 307 NVMIAGYGQKYQSTKAIELLQRM----------------KSC------------------ 332
N MI+GY +A+ + M K C
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323
Query: 333 -GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-PSVSSWNAMLSSYSQSENHKEAIK 390
GF D+ ++VA + + +F + +V SW AM+S + Q++ +EA+
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383
Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYS 450
LF EM+ +GV+P+ T ++IL++ + S +VHA +KT + V + L+ Y
Sbjct: 384 LFSEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAYV 439
Query: 451 KCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFAT 510
K + E A +VF I + DIV W++M+AG + A F ++ + + P +F+F++
Sbjct: 440 KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSS 499
Query: 511 VLSSCAKLSSSF-QGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
+L+ CA ++S QG+Q H K + + V SAL+ MY K G+I A + F K
Sbjct: 500 ILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK 559
Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
+ V+WN MI GYAQ+G +A+ ++K+M VK D +TF+ + AC+H+GLV+ G + F
Sbjct: 560 DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYF 619
Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
+ M D + P +H +CM+D RAG +A +I+ MP IW +L++CR+H
Sbjct: 620 DIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKK 679
Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
L + AAE++ + P++SA Y LL+N+Y+ G W + VR+LM+E + K+P YS
Sbjct: 680 TELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 736
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 178/646 (27%), Positives = 299/646 (46%), Gaps = 90/646 (13%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ LH ++ G DD + L++ Y K +N +
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGR----------------------- 148
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
K+FDEM ERNVV+W LIS RN + ++ L+++ +M NEG P T
Sbjct: 149 --------KVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFT---- 196
Query: 127 FKASTALLDVE----HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
F A+ +L E G + H +V+K GLDK I V+N+L++LY KCG + A +F++
Sbjct: 197 FAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 256
Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
+ VT+ +M+SG A +EAL MF M V + S +SV+ +CA
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN--------- 307
Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ER 301
+ +F+ +Q+HC +K GF D ++ +L+ Y+K M A +F +
Sbjct: 308 --LKELRFT-----EQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT--------------------- 340
+VVSW MI+G+ Q +A++L MK G P+E T
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVV 420
Query: 341 ----------SINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
+L A V+ G ++ ++F + + +W+AML+ Y+Q+ + AIK
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGI-LESGKQVHAASLKTASHIDNYVASGLIGIY 449
+F E+ G+KP+ T + IL+ CAA + GKQ H ++K+ V+S L+ +Y
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
+K E AE VF R E D+V WNSMI+G + + ++A FK+M++ ++ +F
Sbjct: 541 AKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFI 600
Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV-GSALIEMYCKCGDIYGARQFFDMMHG 568
V ++C +G + + +D + S ++++Y + G + A + + M
Sbjct: 601 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN 660
Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
T I + E RL + I + +KP+D +L+
Sbjct: 661 PAGSTIWRTILAACRVHKKTELGRLAAEKIIA-MKPEDSAAYVLLS 705
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 161/334 (48%), Gaps = 1/334 (0%)
Query: 349 VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
V S + +FD P S+ ++L +S+ +EA +LF + G++ D + +
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
+L A + G+Q+H +K D V + L+ Y K + +VF + E
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
++V W ++I+G + NS++ E F +M+ P F+FA L A+ +G QVH
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
+ K+G I V ++LI +Y KCG++ AR FD K+ VTWN MI GYA NG
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
EA+ ++ M + V+ + +F +++ C++ + ++ S+ + +G + T +
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV-VKYGFLFDQNIRTAL 336
Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
+ + +A L E+ C + V W ++S
Sbjct: 337 MVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust.
Identities = 227/722 (31%), Positives = 365/722 (50%), Gaps = 86/722 (11%)
Query: 61 LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH 120
L C + LE A KL + M E V ++ ALVR L + + EG
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVR-------LCEWKRAQEEGSKVYS 118
Query: 121 ITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEE 180
I L+S+ + L VE G NA L+++ + G A VF +
Sbjct: 119 IALSSM-----SSLGVELG-------------------NAFLAMFVRFGNLVDAWYVFGK 154
Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
MSE N ++ ++ G AK EA+ ++ R++ V D + VL CG
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVL-----RTCGGI 209
Query: 240 SDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
D+ G++VH ++ G+E D+ + N+L+ MY K GD+ SA ++F +P
Sbjct: 210 PDL-----------ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
R ++SWN MI+GY + + +EL M+ +PD +T +++ AC GD + GR+
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 360 -----------------------------------MFDSMPSPSVSSWNAMLSSYSQSEN 384
+F M + SW M+S Y +
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378
Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
+AI +R M VKPD T+A +LS+CA +G L++G ++H ++K VA+
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438
Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
LI +YSKC+ + A +FH IP +++ W S+IAGL LN+ EA +F +QM+ + P
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPN 497
Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
+ L++CA++ + G+++HA + + G D F+ +AL++MY +CG + A F+
Sbjct: 498 AITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN 557
Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
K+ +WN ++ GY++ G G V L+ M+ S V+PD+ITF+++L CS S +V
Sbjct: 558 S-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQ 616
Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
G+ F+ M+ D+GV P L HY C++D LGRAG EA I +MP DP +W LL++C
Sbjct: 617 GLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675
Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
R+H + L + +A+ +F LD K+ Y LL N+Y+ G+W ++ VR +M EN + D
Sbjct: 676 RIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAG 735
Query: 745 YS 746
S
Sbjct: 736 CS 737
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/545 (26%), Positives = 261/545 (47%), Gaps = 54/545 (9%)
Query: 58 NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
NA L+ + +L A+ +F +M ERN+ SWN L+ + G ++A+ +Y++M G V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 118 -PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP 176
P T V + + D+ G+ H V++ G + +I V NAL+++Y KCG K A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 177 VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
+F+ M + +++ AM+SG + E LE+F M +V D ++L+SV+ C G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG- 311
Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
D + R++H I GF D+ + NSL MY G AE +FS
Sbjct: 312 ----------DRRLGRDIHA-----YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFS 356
Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKT 356
+ + +VSW MI+GY + KAI+ + M +PDE+T +L AC GD+ T
Sbjct: 357 RMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 357 GREM-----------------------------------FDSMPSPSVSSWNAMLSSYSQ 381
G E+ F ++P +V SW ++++
Sbjct: 417 GVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRL 476
Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYV 441
+ EA+ R+M+ ++P+ TL L++CA +G L GK++HA L+T +D+++
Sbjct: 477 NNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFL 535
Query: 442 ASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
+ L+ +Y +C R A F+ + D+ WN ++ G S F +M ++ +
Sbjct: 536 PNALLDMYVRCGRMNTAWSQFNSQKK-DVTSWNILLTGYSERGQGSMVVELFDRMVKSRV 594
Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
P + +F ++L C+K QG +++E G ++ + ++++ + G++ A +
Sbjct: 595 RPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHK 654
Query: 562 FFDMM 566
F M
Sbjct: 655 FIQKM 659
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 196/412 (47%), Gaps = 56/412 (13%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ +HA+++ G D +CN L ++Y + A+
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAE----------------------- 352
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
KLF M +++VSW +IS N L +KA+ Y M + P IT+A+V
Sbjct: 353 --------KLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAV 404
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
A L D++ G H L IK L + VAN L+++Y+KC A+ +F + N
Sbjct: 405 LSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNV 464
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
+++T++++GL +R EAL R M + + ++++L++ L CAR G
Sbjct: 465 ISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGA---------- 513
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
+ G+++H ++ G D L N+LLDMY + G M++A F N ++ V SW
Sbjct: 514 ------LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSW 566
Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
N+++ GY ++ Q + +EL RM PDE+T I++L C +S ++ G F M
Sbjct: 567 NILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED 626
Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
+P++ + ++ ++ +EA K ++M V PD +L++C
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP---VTPDPAVWGALLNAC 675
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 197/451 (43%), Gaps = 82/451 (18%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +H H++R G D + N LI +Y KC
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCG----------------------------- 245
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
D++ A LFD MP R+++SWN +IS NG+ + L ++ M P +TL SV
Sbjct: 246 --DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
A L D GR H VI G +I V N+L +Y G + A +F M +
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
V++T M+SG +A++ +R+M + +V D +++++VL CA G + D
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLG---DLDT---- 416
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
G ++H L IK + + ++N+L++MY+K +D A IF N+P ++V+SW
Sbjct: 417 ---------GVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISW 467
Query: 307 NVMIAGYGQKYQSTKAIELLQRMK-----------------------SCGFEP------- 336
+IAG + +A+ L++MK CG E
Sbjct: 468 TSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRT 527
Query: 337 ----DEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
D+ +L VR G + T F+S V+SWN +L+ YS+ ++LF
Sbjct: 528 GVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELF 586
Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESG 423
M V+PD T +L C+ ++ G
Sbjct: 587 DRMVKSRVRPDEITFISLLCGCSKSQMVRQG 617
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 147/340 (43%), Gaps = 38/340 (11%)
Query: 3 AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
A + GK +HAH+LR G+ D FL N L+++Y +C ++A F+ KD+ SWN +L+
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLT 571
Query: 63 AQCKSDDLEFAYKLFDEMPERNV----VSWNNLISALVRNGLEEKALSVYNKMSNEGFVP 118
+ +LFD M + V +++ +L+ ++ + + L ++KM + G P
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTP 631
Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLS---LYAKCGWTKHAV 175
A V +++ H + K+ + + V ALL+ ++ K + +
Sbjct: 632 NLKHYACVVDLLGRAGELQEA---HKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSA 688
Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
E+ + + + + + A + E ++ R+M +++D+ G
Sbjct: 689 QHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDA-------------G 735
Query: 236 CG---VESDVFA-QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
C V+ V A SD+K+ H Q T+ GF +S L +++ MD
Sbjct: 736 CSWVEVKGKVHAFLSDDKY----HPQTKEINTVLEGFYE--KMSEVGLTKISESSSMDET 789
Query: 292 EV----IFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
E+ IF ER +++ ++ G TK + + +
Sbjct: 790 EISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCE 829
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 364 bits (934), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 224/776 (28%), Positives = 382/776 (49%), Gaps = 86/776 (11%)
Query: 8 KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
+ +HA ++ GL F +LI+ YS S+ +F ++
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS----------------- 66
Query: 68 DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
P +NV WN++I A +NGL +AL Y K+ P T SV
Sbjct: 67 -------------PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVI 113
Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
KA L D E G + ++ +G + +++V NAL+ +Y++ G A VF+EM + V
Sbjct: 114 KACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLV 173
Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
++ +++SG + EALE++ + + DS ++SSVL +
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVL----------------PAF 217
Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
GQ +H +K G + + ++N L+ MY K A +F + R VS+N
Sbjct: 218 GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYN 277
Query: 308 VMIAGYGQKYQSTKAIEL-LQRMKSCGFEPDEVTSINMLVAC------------------ 348
MI GY + +++ + L+ + F+PD +T ++L AC
Sbjct: 278 TMICGYLKLEMVEESVRMFLENLDQ--FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 349 -----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
+ GD+ T R++F+SM SWN+++S Y QS + EA+KL
Sbjct: 336 AGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKL 395
Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
F+ M + D T +++S + L+ GK +H+ +K+ ID V++ LI +Y+K
Sbjct: 396 FKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAK 455
Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
C + ++F + D V WN++I+ QMR++E+ P +F
Sbjct: 456 CGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT 515
Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
L CA L++ G+++H + + GY +++ +G+ALIEMY KCG + + + F+ M ++
Sbjct: 516 LPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV 575
Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
VTW MI+ Y G G++A+ + DM SG+ PD + F+AI+ ACSHSGLVD G+ F
Sbjct: 576 VTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEK 635
Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR 691
M+ + ++P+++HY C++D L R+ +AE I MP K D IW +L +CR ++
Sbjct: 636 MKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDME 695
Query: 692 LAKRAAEELFRLDPKNSAPYSLLA-NIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
A+R + + L+P + YS+LA N Y++L +WD + +R+ + + I K+P YS
Sbjct: 696 TAERVSRRIIELNPDDPG-YSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYS 750
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 163/639 (25%), Positives = 286/639 (44%), Gaps = 60/639 (9%)
Query: 119 THITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVF 178
T ++ + +A ++ ++ RR H LVI +GLD + + + L+ Y+ ++ VF
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 179 EEMSEPNEV-TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
+S V + +++ +K EALE + + VS D + SV+ CA
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA----- 117
Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
F + G V+ + +GFE+DL + N+L+DMY++ G + A +F
Sbjct: 118 ----------GLFDAEM-GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDE 166
Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-----CVRSG 352
+P R +VSWN +I+GY +A+E+ +K+ PD T ++L A V+ G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Query: 353 DIKTG------------------------------REMFDSMPSPSVSSWNAMLSSYSQS 382
G R +FD M S+N M+ Y +
Sbjct: 227 QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKL 286
Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
E +E++++F E KPD T++ +L +C + L K ++ LK +++ V
Sbjct: 287 EMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR 345
Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
+ LI +Y+KC A VF+ + D V WNS+I+G + +EA FK M E
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
++ ++S +L+ G+ +H+ K G D+ V +ALI+MY KCG++ + +
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
F M +TVTWN +I + G +++ M S V PD TF+ L C+
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525
Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
+G EI + L G E L +I+ + G + + + M + D V W ++
Sbjct: 526 RLGKEIHCCL-LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIY 583
Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSL--LANIYS 719
+ ++ ++A E ++ P S+ +A IY+
Sbjct: 584 AYGMYGE---GEKALETFADMEKSGIVPDSVVFIAIIYA 619
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 159/652 (24%), Positives = 292/652 (44%), Gaps = 88/652 (13%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G L++ IL G D F+ N L+++YS+ A+ +FD+MP +D+ SWN+
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNS------- 177
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
LIS +G E+AL +Y+++ N VP T++SV
Sbjct: 178 ------------------------LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSV 213
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
A LL V+ G+ HG +K G++ + V N L+++Y K A VF+EM +
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
V++ M+ G K + V E++ MF L D +++SSVL CG D+
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSSVL-----RACGHLRDLSL-- 325
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
+ ++ +K GF + + N L+D+YAK GDM +A +F+++ + VSW
Sbjct: 326 ---------AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR-------- 358
N +I+GY Q +A++L + M + D +T + ++ R D+K G+
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK 436
Query: 359 ---------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
++F SM + +WN ++S+ + + +++
Sbjct: 437 SGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQV 496
Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
+M+ V PD T + L CA++ GK++H L+ + + + LI +YSK
Sbjct: 497 TTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSK 556
Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
C E + RVF R+ D+V W MI + +A F M ++ + P F +
Sbjct: 557 CGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAI 616
Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA-LIEMYCKCGDIYGARQFFDMMHGK- 569
+ +C+ +G +++ ++ + A ++++ + I A +F M K
Sbjct: 617 IYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKP 676
Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGL 621
+ W ++ +G + A R+ + +I + PDD + +IL + +++ L
Sbjct: 677 DASIWASVLRACRTSGDMETAERVSRRIIE--LNPDDPGY-SILASNAYAAL 725
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 209/696 (30%), Positives = 361/696 (51%), Gaps = 54/696 (7%)
Query: 89 NNLISALVRNGLEEKALSVYN-KMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
N+ I++L ++ +AL ++ N F T S+ A ++ + GR+ H ++
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
+ + N +LS+Y KCG + A VF+ M E N V++T++++G ++ + EA+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
++ M+++ + D + S++ CA SDV G+Q+H IKL
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASS-----SDVGL-----------GKQLHAQVIKLE 198
Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
+ L N+L+ MY + M A +F +P + ++SW+ +IAG+ Q +A+ L+
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258
Query: 328 RMKSCG-FEPDEVTSINMLVAC-----------------------------------VRS 351
M S G F P+E + L AC R
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318
Query: 352 GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIIL 411
G + + R +FD + P +SWN +++ + + EA+ +F +M+ G PD +L +L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 412 SSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE-LDI 470
+ L G Q+H+ +K D V + L+ +Y+ C +F D
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438
Query: 471 VCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
V WN+++ + +E FK M +E P + +L C ++SS G QVH
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498
Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
K G + F+ + LI+MY KCG + AR+ FD M ++ V+W+ +I GYAQ+G+G+EA
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558
Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMID 650
+ L+K+M ++G++P+ +TFV +LTACSH GLV+ G++++ +MQ +HG+ P +H +C++D
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 618
Query: 651 CLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
L RAG +EAE IDEM + D V+W+ LLS+C+ NV LA++AAE + ++DP NS
Sbjct: 619 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 678
Query: 711 YSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
+ LL ++++S G W++ +R M ++ + K P S
Sbjct: 679 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/650 (24%), Positives = 288/650 (44%), Gaps = 90/650 (13%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ +H HIL + DT L N ++ +Y KC + A+
Sbjct: 86 GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAR----------------------- 122
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
++FD MPERN+VS+ ++I+ +NG +A+ +Y KM E VP S+
Sbjct: 123 --------EVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSI 174
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
KA + DV G++ H VIK+ ++ NAL+++Y + A VF + +
Sbjct: 175 IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDL 234
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAV-SIDSVSLSSVLGVCAREGCGVESDVFAQ 245
++++++++G ++ EAL + M+ V + S L C+
Sbjct: 235 ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS------------- 281
Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
R +G Q+H L IK + SL DMYA+ G ++SA +F + S
Sbjct: 282 ---SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
WNV+IAG + +A+ + +M+S GF PD ++ ++L A + + G +
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 360 -----------------------------MFDSMPSPSVS-SWNAMLSSYSQSENHKEAI 389
+F+ + + S SWN +L++ Q E E +
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
+LF+ M +PD T+ +L C + L+ G QVH SLKT + ++ +GLI +Y
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
+KC A R+F + D+V W+++I G + + EA + FK+M+ + P +F
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578
Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH- 567
VL++C+ + +G +++A ++ + G S ++++ + G + A +F D M
Sbjct: 579 GVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL 638
Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACS 617
+ V W ++ G V L + + +K D A + CS
Sbjct: 639 EPDVVVWKTLLSACKTQG----NVHLAQKAAENILKIDPFNSTAHVLLCS 684
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 363 bits (932), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 241/777 (31%), Positives = 393/777 (50%), Gaps = 92/777 (11%)
Query: 10 LHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
LHAH+L G L D +LIE Y+ + S++ +F+ P+ D + + ++ +C
Sbjct: 20 LHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLI--KC--- 74
Query: 69 DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
NV W +L+ A A+ +Y+++ +E + SV +
Sbjct: 75 ---------------NV--WCHLLDA---------AIDLYHRLVSETTQISKFVFPSVLR 108
Query: 129 ASTALLDVEH---GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
A EH G + HG +IK G+D + + +LL +Y + G A VF+ M +
Sbjct: 109 ACAG--SREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRD 166
Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
V ++ ++S + VV+AL MF+ M+ V D+V++ SV+ CA GC
Sbjct: 167 LVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC--------- 217
Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
+ +R+VHGQ +T K+ F+ D L NSLL MY+K GD+ S+E IF + +++ VS
Sbjct: 218 --LRIARSVHGQ----ITRKM-FDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG-------- 357
W MI+ Y + S KA+ M G EP+ VT ++L +C G I+ G
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 358 -REMFDSMPSPSVS---------------------------SWNAMLSSYSQSENHKEAI 389
RE+ + S S++ +WN+++S Y+ +A+
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390
Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIY 449
LFR+M + +KPD TLA +S+C G++ GKQ+H ++T D +V + LI +Y
Sbjct: 391 GLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMY 449
Query: 450 SKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFA 509
SK + A VF++I +V WNSM+ G S N +EA F M + + + +F
Sbjct: 450 SKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFL 509
Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
V+ +C+ + S +G+ VH ++ G + D+F +ALI+MY KCGD+ A F M +
Sbjct: 510 AVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAETVFRAMSSR 568
Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
+ V+W+ MI+ Y +G A+ + M+ SG KP+++ F+ +L+AC HSG V+ G F
Sbjct: 569 SIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF 628
Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
N M+ GV P +H+ C ID L R+G EA I EMP D +W L++ CR+H
Sbjct: 629 NLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQK 687
Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
+ + K +L + ++ Y+LL+NIY+ G W++ R +R M + + K P YS
Sbjct: 688 MDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYS 744
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 361 bits (927), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 228/780 (29%), Positives = 377/780 (48%), Gaps = 80/780 (10%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +H ++ G D F+ L+ +Y KC A +FD W +Q +
Sbjct: 79 GKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD--------GW-----SQSQ 125
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
S + R+V WN++I + ++ + + +M G P +L+ V
Sbjct: 126 SG-----------VSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIV 174
Query: 127 FKA--STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
E G++ HG +++ LD + ++ AL+ +Y K G + A VF E+ +
Sbjct: 175 VSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDK 234
Query: 185 -NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
N V + M+ G + +L+++ L +V + S S + LG C+
Sbjct: 235 SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS----------- 283
Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
QS+N + G+Q+HC +K+G D ++ SLL MY+K G + AE +FS + ++ +
Sbjct: 284 -QSEN----SGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
WN M+A Y + A++L M+ PD T N++ C G G+ +
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
F SM + +W +++S ++ KEA
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 389 IKLFREMQFR--GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
+K+F +M+ +KPD + + ++CA + L G QVH + +KT ++ +V S LI
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 447 GIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
+YSKC E+A +VF + ++V WNSMI+ S N+L + F M ++P
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSV 578
Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
S +VL + + +S +G+ +H + G +D + +ALI+MY KCG A F M
Sbjct: 579 SITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
K+ +TWN MI+GY +G A+ L+ +M +G PDD+TF+++++AC+HSG V+ G
Sbjct: 639 QHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGK 698
Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
IF M+ D+G+EP ++HY M+D LGRAG EA I MP + D IW LLS+ R
Sbjct: 699 NIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRT 758
Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
H NV L +AE+L R++P+ + Y L N+Y G ++ + LM E + K P S
Sbjct: 759 HHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCS 818
Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 184/660 (27%), Positives = 312/660 (47%), Gaps = 62/660 (9%)
Query: 87 SWNNLISALVRNGLEEKALSVYNKMSNEG-FVPTHITLASVFKASTALLDVEHGRRCHGL 145
S N+ I AL++ G +AL +Y+K F + T S+ KA +AL ++ +G+ HG
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 146 VIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE-------VTFTAMMSGLAK 198
V+ +G + ++A +L+++Y KCG+ +AV VF+ S+ + +M+ G K
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 199 TDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQ 258
R E + FR M+ V D+ SLS V+ V +EG F R G+Q
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG-------------NFRRE-EGKQ 191
Query: 259 VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS-VVSWNVMIAGYGQKY 317
+H ++ + D L +L+DMY K G A +F + ++S VV WNVMI G+G
Sbjct: 192 IHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSG 251
Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM----------------- 360
+++L K+ + + L AC +S + GR++
Sbjct: 252 ICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCT 311
Query: 361 ------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKP 402
F + + WNAM+++Y++++ A+ LF M+ + V P
Sbjct: 312 SLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP 371
Query: 403 DRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
D TL+ ++S C+ +G+ GK VHA K + + S L+ +YSKC + A VF
Sbjct: 372 DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVF 431
Query: 463 HRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE--MYPTQFSFATVLSSCAKLSS 520
+ E D+V W S+I+GL N EA F M+ ++ + P +V ++CA L +
Sbjct: 432 KSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEA 491
Query: 521 SFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHG 580
G QVH + K G V ++FVGS+LI++Y KCG A + F M +N V WN MI
Sbjct: 492 LRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISC 551
Query: 581 YAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEP 640
Y++N + ++ L+ M++ G+ PD ++ ++L A S + + G + + L G+
Sbjct: 552 YSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL-HGYTLRLGIPS 610
Query: 641 ILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEEL 700
+ID + G AE + +M K + W +++ H + A +E+
Sbjct: 611 DTHLKNALIDMYVKCGFSKYAENIFKKMQHK-SLITWNLMIYGYGSHGDCITALSLFDEM 669
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 249/789 (31%), Positives = 398/789 (50%), Gaps = 74/789 (9%)
Query: 14 ILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPH----KDIYSWNAILSAQCKS-- 67
+++ G+F + + + + C S LF + H K Y+ +A++S S
Sbjct: 93 MVKEGIFSNQYA---FVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMY 149
Query: 68 ----DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
+ +A F ++ +N VSWN++IS + G + A +++ M +G PT T
Sbjct: 150 WKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTF 209
Query: 124 ASVFKASTALL--DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
S+ + +L DV + + K GL +++V + L+S +AK G +A VF +M
Sbjct: 210 GSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMF---RLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
N VT +M GL + EA ++F MI + + LSS E G+
Sbjct: 270 ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGL 329
Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
K R VHG H +T L + + + N L++MYAK G + A +F +
Sbjct: 330 ----------KKGREVHG---HVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375
Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV--------- 349
++ VSWN MI G Q +A+E + M+ P T I+ L +C
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Query: 350 --------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
+G + R++F SMP SWN+++ + ++SE
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE 495
Query: 384 NH-KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
EA+ F Q G K +R T + +LS+ +++ E GKQ+H +LK +
Sbjct: 496 RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE 555
Query: 443 SGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEM 501
+ LI Y KC + E++F R+ E D V WNSMI+G N L +A M Q
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ 615
Query: 502 YPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
F +ATVLS+ A +++ +G +VHA + +D+ VGSAL++MY KCG + A +
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675
Query: 562 FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG-VKPDDITFVAILTACSHSG 620
FF+ M +N+ +WN MI GYA++G G+EA++L++ M G PD +TFV +L+ACSH+G
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
L++ G + F SM +G+ P ++H++CM D LGRAG + E I++MP K + +IW +
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795
Query: 681 LSSCRLHANVR---LAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
L +C AN R L K+AAE LF+L+P+N+ Y LL N+Y++ GRW+DL R+ M +
Sbjct: 796 LGAC-CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDA 854
Query: 738 CIVKDPAYS 746
+ K+ YS
Sbjct: 855 DVKKEAGYS 863
Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 180/764 (23%), Positives = 329/764 (43%), Gaps = 101/764 (13%)
Query: 6 AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
A + H+ + +N L D +LCN LI Y + ++ SA+ +FD+MP ++
Sbjct: 19 AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN------------ 66
Query: 66 KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
VSW ++S RNG ++AL M EG S
Sbjct: 67 -------------------CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVS 107
Query: 126 VFKASTAL--LDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKC-GWTKHAVPVFEEMS 182
V +A + + + GR+ HGL+ K+ + V+N L+S+Y KC G +A+ F ++
Sbjct: 108 VLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIE 167
Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV-ESD 241
N V++ +++S ++ A +F M S G C + E D
Sbjct: 168 VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG----SRPTEYTFGSLVTTACSLTEPD 223
Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
V +Q+ C K G DL + + L+ +AK+G + A +F+ + R
Sbjct: 224 VRLL-----------EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272
Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKS-CGFEPDE---------------------- 338
+ V+ N ++ G ++ +A +L M S P+
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKG 332
Query: 339 -------VTS-------------INMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSS 378
+T+ +NM C G I R +F M SWN+M++
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKC---GSIADARRVFYFMTDKDSVSWNSMITG 389
Query: 379 YSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
Q+ EA++ ++ M+ + P TL LSSCA++ + G+Q+H SLK ++
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 449
Query: 439 NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDI-EAFMFFKQMR 497
V++ L+ +Y++ ++F +PE D V WNS+I L+ + + EA + F +
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ 509
Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
+ + +F++VLS+ + LS G+Q+H K+ ++ +ALI Y KCG++
Sbjct: 510 RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMD 569
Query: 558 GARQFFD-MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTAC 616
G + F M ++ VTWN MI GY N +A+ L M+ +G + D + +L+A
Sbjct: 570 GCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAF 629
Query: 617 SHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVI 676
+ ++ G+E+ ++ + +E + + ++D + G A + MP + +
Sbjct: 630 ASVATLERGMEV-HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYS 687
Query: 677 WEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSS 720
W ++S H A + E + +LD + + + S+
Sbjct: 688 WNSMISGYARHGQGEEALKLFETM-KLDGQTPPDHVTFVGVLSA 730
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 356 bits (913), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 192/597 (32%), Positives = 311/597 (52%), Gaps = 104/597 (17%)
Query: 254 VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDM------------------------- 288
++ + VH IK GF ++ + N L+D Y+K G +
Sbjct: 37 IYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGL 96
Query: 289 ------DSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSI 342
D A+ +F ++PER +WN M++G+ Q + +A+ M GF +E +
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 343 NMLVACV-----------------------------------RSGDIKTGREMFDSMPSP 367
++L AC + G++ + +FD M
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
+V SWN++++ + Q+ EA+ +F+ M V+PD TLA ++S+CA++ ++ G++VH
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 428 AASLKTASHIDNYVAS-GLIGIYSKCQRNELAERVFHRIP-------------------- 466
+K ++ + S + +Y+KC R + A +F +P
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336
Query: 467 -----------ELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSC 515
E ++V WN++IAG + N + EA F +++ + PT +SFA +L +C
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 516 AKLSSSFQGRQVHAQIEKDGYV------NDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
A L+ G Q H + K G+ +DIFVG++LI+MY KCG + F M +
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIF 629
+ V+WN MI G+AQNGYG+EA+ L+++M+ SG KPD IT + +L+AC H+G V+ G F
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 630 NSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
+SM D GV P+ DHYTCM+D LGRAG EA+ +I+EMP + D VIW LL++C++H N
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576
Query: 690 VRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
+ L K AE+L ++P NS PY LL+N+Y+ LG+W+D+ VR+ M + + K P S
Sbjct: 577 ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 633
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/615 (29%), Positives = 301/615 (48%), Gaps = 89/615 (14%)
Query: 8 KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
+ +HA ++++G ++ F+ NRLI+ YSKC + + +FDKMP ++IY+WN++++ K
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 68 DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
L+ A LF MPER+ +WN+++S ++ E+AL + M EGFV + ASV
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
A + L D+ G + H L+ K ++Y+ +AL+ +Y+KCG A VF+EM + N V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
++ ++++ + VEAL++F++M+ V D V+L+SV+ CA + S
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA-----------SLSA 268
Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
K + VHG+ V ++ D+ LSN+ +DMYAK + A IF ++P R+V++
Sbjct: 269 IKVGQEVHGRVVKNDKLR----NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSP 367
MI+GY STKA R MF M
Sbjct: 325 SMISGYAMA-ASTKA----------------------------------ARLMFTKMAER 349
Query: 368 SVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVH 427
+V SWNA+++ Y+Q+ ++EA+ LF ++ V P + A IL +CA + L G Q H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 428 AASLK------TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLS 481
LK + D +V + LI +Y KC E VF ++ E D V WN+MI G +
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 482 LNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
N EA F++M ++ P + VLS+C +GR + + +D
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD------- 522
Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
G A + + C M+ + G+ +EA + ++M
Sbjct: 523 FGVAPLRDHYTC-----------------------MVDLLGRAGFLEEAKSMIEEM---P 556
Query: 602 VKPDDITFVAILTAC 616
++PD + + ++L AC
Sbjct: 557 MQPDSVIWGSLLAAC 571
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 209/464 (45%), Gaps = 95/464 (20%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G +H+ I ++ D ++ + L+++YSKC N + AQ +FD+M +++ SWN+
Sbjct: 171 GVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNS------- 223
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
LI+ +NG +AL V+ M P +TLASV
Sbjct: 224 ------------------------LITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 127 FKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGWTKHA------VPV-- 177
A +L ++ G+ HG V+K L +I ++NA + +YAKC K A +P+
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 178 -----------------------FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
F +M+E N V++ A+++G + EAL +F L+ R
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 215 KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH-GQQVHCLTIKLGF----- 268
++V S +++L CA +H G Q H +K GF
Sbjct: 380 ESVCPTHYSFANILKACADLA-----------------ELHLGMQAHVHVLKHGFKFQSG 422
Query: 269 -EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
E D+ + NSL+DMY K G ++ ++F + ER VSWN MI G+ Q +A+EL +
Sbjct: 423 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 482
Query: 328 RMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQS 382
M G +PD +T I +L AC +G ++ GR F SM +P + M+ ++
Sbjct: 483 EMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 542
Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
+EA + EM ++PD +L++C + GK V
Sbjct: 543 GFLEEAKSMIEEMP---MQPDSVIWGSLLAACKVHRNITLGKYV 583
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 168/325 (51%), Gaps = 35/325 (10%)
Query: 403 DRTTLAIILSSCAAMGILE-SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERV 461
D + A +L SC + + VHA+ +K+ + ++ + LI YSKC E +V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 462 FHRIPELDIVCWNSMIAGLS-LNSLD------------------------------IEAF 490
F ++P+ +I WNS++ GL+ L LD EA
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
+F M + ++SFA+VLS+C+ L+ +G QVH+ I K +++D+++GSAL++MY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
KCG++ A++ FD M +N V+WN +I + QNG EA+ +++ M+ S V+PD++T
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
++++AC+ + VG E+ + + + + +D + EA + D MP
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 671 KDDPVIWEV-LLSSCRLHANVRLAK 694
++ VI E ++S + A+ + A+
Sbjct: 318 RN--VIAETSMISGYAMAASTKAAR 340
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 163/327 (49%), Gaps = 16/327 (4%)
Query: 7 GKLLHAHILRNG-LFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
G+ +H +++N L +D L N +++Y+KC+ A+ +FD MP +++ + +++S
Sbjct: 272 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 331
Query: 66 KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
+ + A +F +M ERNVVSWN LI+ +NG E+ALS++ + E PTH + A+
Sbjct: 332 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 391
Query: 126 VFKASTALLDVEHGRRCHGLVIKIGL------DKNIYVANALLSLYAKCGWTKHAVPVFE 179
+ KA L ++ G + H V+K G + +I+V N+L+ +Y KCG + VF
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVE 239
+M E + V++ AM+ G A+ EALE+FR M+ D +++ VL C G E
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 240 S-DVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
F+ F C+ LG L + S+++ D VI+ +L
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPD----SVIWGSL 567
Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIEL 325
V N+ + KY + K +E+
Sbjct: 568 LAACKVHRNITLG----KYVAEKLLEV 590
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 355 bits (911), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 205/649 (31%), Positives = 338/649 (52%), Gaps = 55/649 (8%)
Query: 135 DVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMS 194
+++ R+ HG++ GL +I +A L+SLY G+TK A VF+++ EP+ + M+
Sbjct: 56 NIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLR 115
Query: 195 GLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNV 254
VE ++++ L+++ D + S L C DN
Sbjct: 116 CYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE---------LQDLDN------ 160
Query: 255 HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYG 314
G+++HC +K+ ++ L+ LLDMYAK G++ SA +F+++ R+VV W MIAGY
Sbjct: 161 -GKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYV 218
Query: 315 QKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC-------------------------- 348
+ + + L RM+ +E T +++AC
Sbjct: 219 KNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC 278
Query: 349 ---------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
V+ GDI R +F+ + W AM+ Y+ + + EA+ LF++M+
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
+KP+ T+A +LS C + LE G+ VH S+K D VA+ L+ +Y+KC +N A+
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAK 397
Query: 460 RVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLS 519
VF E DIV WNS+I+G S N EA F +M + P + A++ S+CA L
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Query: 520 SSFQGRQVHAQIEKDGYV--NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEM 577
S G +HA K G++ + + VG+AL++ Y KCGD AR FD + KNT+TW+ M
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 517
Query: 578 IHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHG 637
I GY + G ++ L+++M+ KP++ TF +IL+AC H+G+V+ G + F+SM D+
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 577
Query: 638 VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAA 697
P HYTCM+D L RAG +A +I++MP + D + L C +H+ L +
Sbjct: 578 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 637
Query: 698 EELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
+++ L P +++ Y L++N+Y+S GRW+ + VR LM + + K +S
Sbjct: 638 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 166/675 (24%), Positives = 291/675 (43%), Gaps = 90/675 (13%)
Query: 11 HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
H + NGL D + +L+ LY T A+ +FD++P D Y W +L C + +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 71 EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKAS 130
KL+D + + GF I + KA
Sbjct: 124 VEVVKLYDLLMKH-------------------------------GFRYDDIVFSKALKAC 152
Query: 131 TALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFT 190
T L D+++G++ H ++K+ N+ V LL +YAKCG K A VF +++ N V +T
Sbjct: 153 TELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWT 211
Query: 191 AMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKF 250
+M++G K D E L +F M V + + +++ C K
Sbjct: 212 SMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACT----------------KL 255
Query: 251 SRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMI 310
S G+ H +K G E L SLLDMY K GD+ +A +F+ +V W MI
Sbjct: 256 SALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMI 315
Query: 311 AGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE----------- 359
GY +A+ L Q+MK +P+ VT ++L C +++ GR
Sbjct: 316 VGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW 375
Query: 360 -----------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
+F+ + +WN+++S +SQ+ + EA+ LF M
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA--SHIDNYVASGLIGIYSKCQR 454
V P+ T+A + S+CA++G L G +HA S+K + +V + L+ Y+KC
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 455 NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSS 514
+ A +F I E + + W++MI G I + F++M + + P + +F ++LS+
Sbjct: 496 PQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555
Query: 515 CAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV- 572
C +G++ + + KD + + +++M + G++ A + M + V
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVR 615
Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHS-GLVDVGVEIFNS 631
+ +HG + D + K M+ + PDD ++ +++ S G + E+ N
Sbjct: 616 CFGAFLHGCGMHSRFDLGEIVIKKML--DLHPDDASYYVLVSNLYASDGRWNQAKEVRNL 673
Query: 632 MQLDHGVEPILDHYT 646
M+ G+ I H T
Sbjct: 674 MK-QRGLSKIAGHST 687
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 211/428 (49%), Gaps = 60/428 (14%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK H ++++G+ + L L+++Y KC + +A+ +F++ H D+ W A
Sbjct: 261 GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTA------- 313
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
+I NG +ALS++ KM P +T+ASV
Sbjct: 314 ------------------------MIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASV 349
Query: 127 FKASTALLDVEHGRRCHGLVIKIGL-DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
+ ++E GR HGL IK+G+ D N VANAL+ +YAKC + A VFE SE +
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKD 407
Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
V + +++SG ++ + EAL +F M ++V+ + V+++S+ CA G
Sbjct: 408 IVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG---------- 457
Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEA--DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
S V G +H ++KLGF A +H+ +LLD YAK GD SA +IF + E++
Sbjct: 458 -----SLAV-GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511
Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
++W+ MI GYG++ + ++EL + M +P+E T ++L AC +G + G++ F S
Sbjct: 512 ITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSS 571
Query: 364 MP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMG 418
M +PS + M+ +++ ++A+ + +M ++PD L C
Sbjct: 572 MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP---IQPDVRCFGAFLHGCGMHS 628
Query: 419 ILESGKQV 426
+ G+ V
Sbjct: 629 RFDLGEIV 636
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 225/776 (28%), Positives = 372/776 (47%), Gaps = 81/776 (10%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +HA ++ N + D++ R++ +Y+ C + +F
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF-------------------- 93
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
Y+L ++ ++ WN++IS+ VRNGL +AL+ Y KM G P T +
Sbjct: 94 -------YRL--DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCL 144
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
KA AL + + V +G+D N +VA++L+ Y + G +F+ + + +
Sbjct: 145 VKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDC 204
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
V + M++G AK + ++ F +M +S ++V+ VL VCA + + D+
Sbjct: 205 VIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASK---LLIDL---- 257
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
G Q+H L + G + + + NSLL MY+K G D A +F + V+W
Sbjct: 258 ---------GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTW 308
Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLV-------------------- 346
N MI+GY Q +++ M S G PD +T ++L
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMR 368
Query: 347 ---------------ACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
A + + + +F S V + AM+S Y + + +++++
Sbjct: 369 HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEM 428
Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
FR + + P+ TL IL + L+ G+++H +K + +I +Y+K
Sbjct: 429 FRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAK 488
Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
C R LA +F R+ + DIV WNSMI + + A F+QM + + S +
Sbjct: 489 CGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAA 548
Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
LS+CA L S G+ +H + K +D++ S LI+MY KCG++ A F M KN
Sbjct: 549 LSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608
Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMI-ASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
V+WN +I +G +++ L+ +M+ SG++PD ITF+ I+++C H G VD GV F
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR 668
Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
SM D+G++P +HY C++D GRAG EA + MP D +W LL +CRLH NV
Sbjct: 669 SMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNV 728
Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
LA+ A+ +L LDP NS Y L++N +++ W+ + VR LM E + K P YS
Sbjct: 729 ELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYS 784
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/616 (23%), Positives = 273/616 (44%), Gaps = 59/616 (9%)
Query: 114 EGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKH 173
E +P ++L + +A + + G++ H +I + + Y +L +YA CG
Sbjct: 31 EETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSD 88
Query: 174 AVPVFE--EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
+F ++ + + +++S + + +AL + M+ VS D + ++ C
Sbjct: 89 CGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIK-LGFEADLHLSNSLLDMYAKNGDMDS 290
+N G T+ LG + + +++SL+ Y + G +D
Sbjct: 149 VAL-----------------KNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDV 191
Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
+F + ++ V WNVM+ GY + I+ M+ P+ VT +L C
Sbjct: 192 PSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCAS 251
Query: 351 S---------------------GDIKT---------GR-----EMFDSMPSPSVSSWNAM 375
G IK GR ++F M +WN M
Sbjct: 252 KLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCM 311
Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
+S Y QS +E++ F EM GV PD T + +L S + LE KQ+H ++ +
Sbjct: 312 ISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSI 371
Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
+D ++ S LI Y KC+ +A+ +F + +D+V + +MI+G N L I++ F+
Sbjct: 372 SLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRW 431
Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
+ + ++ P + + ++L L + GR++H I K G+ N +G A+I+MY KCG
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGR 491
Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
+ A + F+ + ++ V+WN MI AQ+ A+ +++ M SG+ D ++ A L+A
Sbjct: 492 MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSA 551
Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
C++ G I M + H + + + +ID + G+ A + M K + V
Sbjct: 552 CANLPSESFGKAIHGFM-IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIV 609
Query: 676 IWEVLLSSCRLHANVR 691
W ++++C H ++
Sbjct: 610 SWNSIIAACGNHGKLK 625
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 352 bits (903), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 220/720 (30%), Positives = 346/720 (48%), Gaps = 125/720 (17%)
Query: 58 NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
N +L +S + A LFDEMP+RN SWN +I + +G + +L ++ M
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMP----- 120
Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
+++ Y N ++S +AK G A +
Sbjct: 121 ----------------------------------ERDGYSWNVVVSGFAKAGELSVARRL 146
Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCG 237
F M E + VT +++ G EAL +F+ + S D+++L++VL CA
Sbjct: 147 FNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACA----- 198
Query: 238 VESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
+ G+Q+H + G E D +++SL+++YAK GD+ A +
Sbjct: 199 -----------ELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQ 247
Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
+ E S + +I+GY G +
Sbjct: 248 IREPDDHSLSALISGYAN-----------------------------------CGRVNES 272
Query: 358 REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAM 417
R +FD + V WN+M+S Y + EA+ LF EM+ + D TLA ++++C +
Sbjct: 273 RGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGL 331
Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQ------------------------ 453
G LE+GKQ+H + K D VAS L+ +YSKC
Sbjct: 332 GFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMI 391
Query: 454 -------RNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQF 506
R + A+RVF RI ++ WNSM G S N +E +F QM + ++ +
Sbjct: 392 KVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEV 451
Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
S ++V+S+CA +SS G QV A+ G +D V S+LI++YCKCG + R+ FD M
Sbjct: 452 SLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM 511
Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGV 626
+ V WN MI GYA NG G EA+ L+K M +G++P ITF+ +LTAC++ GLV+ G
Sbjct: 512 VKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGR 571
Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
++F SM++DHG P +H++CM+D L RAG+ EA L++EMP D +W +L C
Sbjct: 572 KLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVA 631
Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
+ + K+AAE++ L+P+NS Y L+ I+++ G W+ VR+LM EN + K+P S
Sbjct: 632 NGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/575 (25%), Positives = 263/575 (45%), Gaps = 127/575 (22%)
Query: 14 ILRNGLFDDT-----FLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
I RN LFD+ F N +IE Y ++ FD MP +D YSWN ++S K+
Sbjct: 80 IARN-LFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAG 138
Query: 69 DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
+L A +LF+ MPE++VV+ N+L+ + NG E+AL ++ +++ F ITL +V K
Sbjct: 139 ELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLK 195
Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
A L ++ G++ H ++ G++ + + ++L+++YAKCG + A + E++ EP++ +
Sbjct: 196 ACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHS 255
Query: 189 FTAMMSGLAKTDRV-------------------------------VEALEMFRLMIRKAV 217
+A++SG A RV +EAL +F M R
Sbjct: 256 LSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNET 314
Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
DS +L++V+ C G F ++ G+Q+HC K G D+ ++++
Sbjct: 315 REDSRTLAAVINACIGLG-------FLET---------GKQMHCHACKFGLIDDIVVAST 358
Query: 278 LLDMYAKNGD-------------------------------MDSAEVIFSNLPERSVVSW 306
LLDMY+K G +D A+ +F + +S++SW
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 418
Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV----------------- 349
N M G+ Q + + +E +M DEV+ +++ AC
Sbjct: 419 NSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI 478
Query: 350 ------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
+ G ++ GR +FD+M WN+M+S Y+ + EAI L
Sbjct: 479 VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDL 538
Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI--DNYVASGLIGIY 449
F++M G++P + T ++L++C G++E G+++ S+K D S ++ +
Sbjct: 539 FKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLF-ESMKVDHGFVPDKEHFSCMVDLL 597
Query: 450 SKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLN 483
++ E A + +P ++D W+S++ G N
Sbjct: 598 ARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVAN 632
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 218/455 (47%), Gaps = 56/455 (12%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +HA IL G+ D+ + + L+ +Y+KC + A ++ +++ D +S +A++S
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
+ + LFD R V+ WN++IS + N ++ +AL ++N+M NE + TLA+V
Sbjct: 266 CGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSR-TLAAV 324
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP---------- 176
A L +E G++ H K GL +I VA+ LL +Y+KCG A
Sbjct: 325 INACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDT 384
Query: 177 ---------------------VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
VFE + + +++ +M +G ++ VE LE F M +
Sbjct: 385 ILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKL 444
Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
+ D VSLSSV+ CA S G+QV +G ++D +S
Sbjct: 445 DLPTDEVSLSSVISACA----------------SISSLELGEQVFARATIVGLDSDQVVS 488
Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
+SL+D+Y K G ++ +F + + V WN MI+GY Q +AI+L ++M G
Sbjct: 489 SSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIR 548
Query: 336 PDEVTSINMLVACVRSGDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIK 390
P ++T + +L AC G ++ GR++F+SM P ++ M+ +++ +EAI
Sbjct: 549 PTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAIN 608
Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
L EM F D + + IL C A G GK+
Sbjct: 609 LVEEMPF---DVDGSMWSSILRGCVANGYKAMGKK 640
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 143/294 (48%), Gaps = 15/294 (5%)
Query: 6 AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
GK +H H + GL DD + + L+++YSKC + A LF ++ D N+++
Sbjct: 336 TGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYF 395
Query: 66 KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
++ A ++F+ + ++++SWN++ + +NG + L +++M ++L+S
Sbjct: 396 SCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSS 455
Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
V A ++ +E G + +GLD + V+++L+ LY KCG+ +H VF+ M + +
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
EV + +M+SG A + EA+++F+ M + ++ VL C G E +
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFE 575
Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
S + + GF D + ++D+ A+ G ++ A + +P
Sbjct: 576 S---------------MKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMP 614
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 223/784 (28%), Positives = 381/784 (48%), Gaps = 86/784 (10%)
Query: 1 KKAHVAGKLLHAHILRN-GLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
++A G+ LH+ I + F+ FL +L+ +Y KC +
Sbjct: 93 RRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSL-------------------- 132
Query: 60 ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
DD E K+FDEMP+R +WN +I A V NG AL++Y M EG
Sbjct: 133 --------DDAE---KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
+ ++ KA L D+ G H L++K+G ++ NAL+S+YAK A +F+
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 180 EMSEPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
E + V + +++S + + + +E LE+FR M + +S ++ S L C
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC------- 294
Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSN 297
+ FS G+++H +K ++L++ N+L+ MY + G M AE I
Sbjct: 295 ---------DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 298 LPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG 357
+ VV+WN +I GY Q +A+E M + G + DEV+ +++ A R ++ G
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405
Query: 358 REM-----------------------------------FDSMPSPSVSSWNAMLSSYSQS 382
E+ F M + SW +++ Y+Q+
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Query: 383 ENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
+ H EA++LFR++ + ++ D L IL + + + + K++H L+ +D +
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQ 524
Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
+ L+ +Y KC+ A RVF I D+V W SMI+ +LN + EA F++M + +
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584
Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
+ +LS+ A LS+ +GR++H + + G+ + + A+++MY CGD+ A+
Sbjct: 585 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 644
Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLV 622
FD + K + + MI+ Y +G G AV L+ M V PD I+F+A+L ACSH+GL+
Sbjct: 645 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 704
Query: 623 DVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS 682
D G M+ ++ +EP +HY C++D LGRA EA + M + +W LL+
Sbjct: 705 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLA 764
Query: 683 SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
+CR H+ + + AA+ L L+PKN L++N+++ GRW+D+ VR M + + K
Sbjct: 765 ACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKH 824
Query: 743 PAYS 746
P S
Sbjct: 825 PGCS 828
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 149/324 (45%), Gaps = 23/324 (7%)
Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
+PSP ++ ++ +L+ + F+ + A +L C + G
Sbjct: 52 VPSPKLACFDGVLT------------EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQG 99
Query: 424 KQVHAASLKTASHID-NYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
+Q+H+ KT + +++A L+ +Y KC + AE+VF +P+ WN+MI
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159
Query: 483 NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
N A + MR + SF +L +CAKL G ++H+ + K GY + F+
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219
Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
+AL+ MY K D+ AR+ FD K + V WN ++ Y+ +G E + L+++M +G
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279
Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSM--QLDHGVEPILDHYTC--MIDCLGRAGH 657
P+ T V+ LTAC +G EI S+ H E Y C +I R G
Sbjct: 280 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL----YVCNALIAMYTRCGK 335
Query: 658 FHEAEMLIDEMPCKDDPVIWEVLL 681
+AE ++ +M D V W L+
Sbjct: 336 MPQAERILRQMN-NADVVTWNSLI 358
>sp|O49680|PP324_ARATH Pentatricopeptide repeat-containing protein At4g19220,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E2 PE=3
SV=2
Length = 951
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 220/786 (27%), Positives = 392/786 (49%), Gaps = 100/786 (12%)
Query: 9 LLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSD 68
+LH + GL D+ LCN L+ LY+K N + SA+C
Sbjct: 209 MLHCLAIETGLVGDSSLCNALMNLYAKGEN---------------------LSSAEC--- 244
Query: 69 DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
+F M R++VSWN +++ + NG K+L + M+ G +T + V
Sbjct: 245 -------VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297
Query: 129 ASTALLDVEHGRRCHGLVIKIGL--DKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
A +++ ++ G HGLVIK G + ++ V N+++S+Y+KCG T+ A VFEE+ +
Sbjct: 298 ACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDV 357
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
++ A+++G A EA + M + D ++ S+ +C
Sbjct: 358 ISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICG------------- 404
Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEAD-LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
D FSR G+ VH T+++ ++ L + NS++DMY K G AE++F R +V
Sbjct: 405 -DLSFSR--EGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLV 461
Query: 305 SWNVMIAGYGQKYQSTKAIELLQR------------------MKSC-------------- 332
SWN MI+ + Q + KA L + + SC
Sbjct: 462 SWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHC 521
Query: 333 -----GFEPDEVTS---INMLVACVRSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSE 383
GF + +++ INM + C D+ + ++M + ++SWN+++S + S
Sbjct: 522 WLQKLGFGDNMLSANSVINMYIGCR---DLTSAFLRLETMSETRDLTSWNSVISGCASSG 578
Query: 384 NHKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA 442
+H E+++ F+ M G ++ D TL +S+ +G++ G+ H ++K+ +D +
Sbjct: 579 HHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQ 638
Query: 443 SGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMY 502
+ LI +Y +C+ E A +VF I + ++ WN +I+ LS N E F F+ ++ +
Sbjct: 639 NTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LE 695
Query: 503 PTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQF 562
P + +F +LS+ +L S+ G Q H + + G+ + FV +AL++MY CG + +
Sbjct: 696 PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKV 755
Query: 563 FDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA-SGVKPDDITFVAILTACSHSGL 621
F + WN +I + +G G++A+ L+K++ + S ++P+ +F+++L+ACSHSG
Sbjct: 756 FRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGF 815
Query: 622 VDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
+D G+ + M+ GV+P+ +H ++D LGRAG EA I + +W LL
Sbjct: 816 IDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALL 875
Query: 682 SSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVK 741
S+C H + +L K AE LF ++P N++ Y LAN Y LG W++ +R+++ +N + K
Sbjct: 876 SACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKK 935
Query: 742 DPAYSL 747
P YS+
Sbjct: 936 LPGYSV 941
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/625 (25%), Positives = 295/625 (47%), Gaps = 74/625 (11%)
Query: 52 KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
+D+ + + +L+ ++ +L + LFDE+ E++V+ WN++I+AL +NG A+ ++ +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRC---HGLVIKIGLDKNIYVANALLSLYAKC 168
++G ++ A++AL + R+C H L I+ GL + + NAL++LYAK
Sbjct: 180 IHKG---NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKG 236
Query: 169 GWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVL 228
A VF M + V++ +M+ ++L+ F+ M D+V+ S V+
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 229 GVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS--NSLLDMYAKNG 286
C+ +E G+ +H L IK G+ + H+S NS++ MY+K G
Sbjct: 297 SACS----SIEELTL------------GESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Query: 287 DMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC-GFEPDEVTSINML 345
D ++AE +F L R V+S N ++ G+ +A +L +M+S +PD T +++
Sbjct: 341 DTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 346 VACVRSGDIKTGRE---------------------------------------MFDSMPS 366
C GD+ RE +F +
Sbjct: 401 SIC---GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTH 457
Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREM--QFRGVKPDRTTLAIILSSCAAMGILESGK 424
+ SWN+M+S++SQ+ +A LF+E+ ++ K +T+ IL+SC + L GK
Sbjct: 458 RDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGK 517
Query: 425 QVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLN 483
VH K + A+ +I +Y C+ A + E D+ WNS+I+G + +
Sbjct: 518 SVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASS 577
Query: 484 SLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFV 542
+E+ F+ M R+ ++ + +S+ L QGR H K D +
Sbjct: 578 GHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQL 637
Query: 543 GSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGV 602
+ LI MY +C DI A + F ++ N +WN +I +QN G E +L++++ +
Sbjct: 638 QNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KL 694
Query: 603 KPDDITFVAILTACSHSGLVDVGVE 627
+P++ITFV +L+A + G G++
Sbjct: 695 EPNEITFVGLLSASTQLGSTSYGMQ 719
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 175/765 (22%), Positives = 320/765 (41%), Gaps = 140/765 (18%)
Query: 40 HSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNG 99
+ + + F K HK ++ + + S + LFDE+PER
Sbjct: 41 YCSNYYFSKRKHKRHFTSSVL------SPVTPIVHNLFDELPERE--------------- 79
Query: 100 LEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVAN 159
N + + L V ++ + E R H +K GL +++ ++
Sbjct: 80 -------------NRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSS 126
Query: 160 ALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
LL+ Y + G + +F+E+ E + + + +M++ L + R + A+ +F MI K
Sbjct: 127 KLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEF 186
Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLL 279
DS +L + K S +HCL I+ G D L N+L+
Sbjct: 187 DSTTLLLA----------ASALSSLHLSRKCS------MLHCLAIETGLVGDSSLCNALM 230
Query: 280 DMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEV 339
++YAK ++ SAE +F+++ R +VSWN ++ K+++ + M G E D V
Sbjct: 231 NLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTV 290
Query: 340 TSINMLVAC-------------------------------------VRSGDIKTGREMFD 362
T ++ AC + GD + +F+
Sbjct: 291 TFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFE 350
Query: 363 SMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ-FRGVKPDRTTLAIILSSCAAMGILE 421
+ V S NA+L+ ++ + +EA + +MQ ++PD T+ I S C +
Sbjct: 351 ELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSR 410
Query: 422 SGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
G+ VH +++ V + +I +Y KC AE +F D+V WNSMI+
Sbjct: 411 EGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAF 470
Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATV---LSSCAKLSSSFQGRQVHAQIEKDGYV 537
S N +A FK++ +E ++FS +TV L+SC S G+ VH ++K G+
Sbjct: 471 SQNGFTHKAKNLFKEV-VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFG 529
Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
+++ +++I MY C D+ A + M ++ +WN +I G A +G+ E++R ++
Sbjct: 530 DNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQA 589
Query: 597 MIASG-VKPDDITFVAILTACSHSGLV---------------DVGVEIFNSMQLDHG--- 637
M G ++ D IT + ++A + GLV ++ ++ N++ +G
Sbjct: 590 MSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCK 649
Query: 638 ------------VEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLS--- 682
+P L + C+I L + E L + + + + + LLS
Sbjct: 650 DIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSAST 709
Query: 683 -----SCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLG 722
S + A+ L +R F+ +P SA L ++YSS G
Sbjct: 710 QLGSTSYGMQAHCHLIRRG----FQANPFVSAA---LVDMYSSCG 747
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 36/248 (14%)
Query: 5 VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
+ G+ H +++ DT L N LI +Y +C + SA +F + ++ SWN +
Sbjct: 617 LQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCV---- 672
Query: 65 CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
ISAL +N + ++ + E P IT
Sbjct: 673 ---------------------------ISALSQNKAGREVFQLFRNLKLE---PNEITFV 702
Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
+ AST L +G + H +I+ G N +V+ AL+ +Y+ CG + + VF
Sbjct: 703 GLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVN 762
Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFR-LMIRKAVSIDSVSLSSVLGVCAREGCGVES-DV 242
+ + +++S +A+E+F+ L + + S S+L C+ G E
Sbjct: 763 SISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSY 822
Query: 243 FAQSDNKF 250
+ Q + KF
Sbjct: 823 YKQMEEKF 830
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 11/191 (5%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G H H++R G + F+ L+++YS C + +F I +WN+++SA
Sbjct: 717 GMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGF 776
Query: 67 SDDLEFAYKLFDEMP-----ERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
E A +LF E+ E N S+ +L+SA +G ++ LS Y +M E F +
Sbjct: 777 HGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQM-EEKFGVKPV 835
Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE-- 179
T V+ L R + + IG + V ALLS G TK V E
Sbjct: 836 TEHRVWIVDM-LGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVL 894
Query: 180 -EMSEPNEVTF 189
EM EP+ ++
Sbjct: 895 FEM-EPDNASY 904
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 346 bits (887), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 233/779 (29%), Positives = 369/779 (47%), Gaps = 116/779 (14%)
Query: 6 AGKLLHAHILRNGLF--DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSA 63
GK +HA IL+NG F + ++ +L+ Y+KC
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLVIFYAKC--------------------------- 120
Query: 64 QCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITL 123
D LE A LF ++ RNV SW +I R GL E AL + +M P + +
Sbjct: 121 ----DALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 176
Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
+V KA AL GR HG V+K GL+ ++VA++L +Y KCG A VF+E+ +
Sbjct: 177 PNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD 236
Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
N V + A+M G + + EA+ +F M ++ V V++S+ L A G GVE
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMG-GVE---- 291
Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
G+Q H + I G E D L SLL+ Y K G ++ AE++F + E+ V
Sbjct: 292 -----------EGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDV 340
Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM--- 360
V+WN++I+GY Q+ AI + Q M+ + D VT ++ A R+ ++K G+E+
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCY 400
Query: 361 --------------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEA 388
FDS + WN +L++Y++S EA
Sbjct: 401 CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA 460
Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGI 448
++LF MQ GV P+ T +I+ S G ++ K D ++ GI
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK-------------DMFLQMQSSGI 507
Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
IP L + W +M+ G+ N EA +F ++M+++ + P FS
Sbjct: 508 ----------------IPNL--ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 549
Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
LS+CA L+S GR +H I ++ + + + + ++L++MY KCGDI A + F
Sbjct: 550 TVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKL 609
Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
N MI YA G EA+ LY+ + G+KPD+IT +L+AC+H+G ++ +E
Sbjct: 610 YSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIE 669
Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
IF + ++P L+HY M+D L AG +A LI+EMP K D + + L++SC
Sbjct: 670 IFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQ 729
Query: 688 ANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
L + +L +P+NS Y ++N Y+ G WD++ +RE+M + K P S
Sbjct: 730 RKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCS 788
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 155/689 (22%), Positives = 298/689 (43%), Gaps = 91/689 (13%)
Query: 87 SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
S+ + +S+L +NG ++ALS+ +M + + D+ G++ H +
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI 96
Query: 147 IKIG--LDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
+K G +N Y+ L+ YAKC + A +F ++ N ++ A++ +
Sbjct: 97 LKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG 156
Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
AL F M+ + D+ + +V C A ++F R VHG +
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACG-----------ALKWSRFGRGVHG-----YVV 200
Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
K G E + +++SL DMY K G +D A +F +P+R+ V+WN ++ GY Q ++ +AI
Sbjct: 201 KSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIR 260
Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------------- 359
L M+ G EP VT L A G ++ G++
Sbjct: 261 LFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC 320
Query: 360 ----------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
+FD M V +WN ++S Y Q ++AI + + M+ +K D TLA
Sbjct: 321 KVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLAT 380
Query: 410 ILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELD 469
++S+ A L+ GK+V ++ + D +AS ++ +Y+KC A++VF E D
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKD 440
Query: 470 IVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA 529
++ WN+++A + + L EA F M+ + P ++ ++ S + + + +
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFL 500
Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
Q++ G + N ++W M++G QNG +E
Sbjct: 501 QMQSSGII-------------------------------PNLISWTTMMNGMVQNGCSEE 529
Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
A+ + M SG++P+ + L+AC+H + +G I + + ++ T ++
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 589
Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVR--LAKRAAEELFRLDPKN 707
D + G ++AE + + P + ++S+ L+ N++ +A + E L P N
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELP-LSNAMISAYALYGNLKEAIALYRSLEGVGLKPDN 648
Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSE 736
+ N+ S+ D+ E+ ++
Sbjct: 649 IT----ITNVLSACNHAGDINQAIEIFTD 673
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 189/375 (50%), Gaps = 16/375 (4%)
Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
SPS +S+ +SS ++ KEA+ L EM FR ++ IL C L +GKQ
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
Query: 426 VHAASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLN 483
+HA LK + Y+ + L+ Y+KC E+AE +F ++ ++ W ++I
Sbjct: 92 IHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRI 151
Query: 484 SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG 543
L A M F +M +NE++P F V +C L S GR VH + K G + +FV
Sbjct: 152 GLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVA 211
Query: 544 SALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVK 603
S+L +MY KCG + A + FD + +N V WN ++ GY QNG +EA+RL+ DM GV+
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271
Query: 604 PDDITFVAILTACSHSGLVDVG-----VEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHF 658
P +T L+A ++ G V+ G + I N M+LD+ + L ++ C + G
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC------KVGLI 325
Query: 659 HEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIY 718
AEM+ D M + D V W +++S V A +L RL+ K LA +
Sbjct: 326 EYAEMVFDRM-FEKDVVTWNLIISGYVQQGLVEDAIYMC-QLMRLE-KLKYDCVTLATLM 382
Query: 719 SSLGRWDDLRAVREL 733
S+ R ++L+ +E+
Sbjct: 383 SAAARTENLKLGKEV 397
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 39/186 (20%)
Query: 3 AHVA----GKLLHAHILRNGLFDDTFLC--NRLIELYSKCNNTHSAQHLFDKMPHKDIYS 56
AH+A G+ +H +I+RN L + + L+++Y+KC + + A+ +F
Sbjct: 557 AHLASLHIGRTIHGYIIRN-LQHSSLVSIETSLVDMYAKCGDINKAEKVFGS-------- 607
Query: 57 WNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
KL+ E+P N +ISA G ++A+++Y + G
Sbjct: 608 ------------------KLYSELPLSNA-----MISAYALYGNLKEAIALYRSLEGVGL 644
Query: 117 VPTHITLASVFKASTALLDVEHGRRCHG-LVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
P +IT+ +V A D+ +V K + + ++ L A G T+ A+
Sbjct: 645 KPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKAL 704
Query: 176 PVFEEM 181
+ EEM
Sbjct: 705 RLIEEM 710
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/517 (37%), Positives = 289/517 (55%), Gaps = 39/517 (7%)
Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
E ++ N ++ YAK+ + A +F +P+ VS+N +I+GY ++ A+ L +R
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 329 MKSCGFEPDEVTSINMLVACVRSGD---------IKTGREMFDSMPSPSVS--------- 370
M+ GFE D T ++ AC D + G + + S+ + V+
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 371 ----------------SWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
SWN+M+ +Y Q + +A+ L++EM F+G K D TLA +L++
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL---AERVFHRIPELDIV 471
++ L G+Q H +K H +++V SGLI YSKC + +E+VF I D+V
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 472 CWNSMIAGLSLNS-LDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHA- 529
WN+MI+G S+N L EA F+QM++ P SF V S+C+ LSS Q +Q+H
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 530 QIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDE 589
I+ N I V +ALI +Y K G++ AR FD M N V++N MI GYAQ+G+G E
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 590 AVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMI 649
A+ LY+ M+ SG+ P+ ITFVA+L+AC+H G VD G E FN+M+ +EP +HY+CMI
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMI 490
Query: 650 DCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSA 709
D LGRAG EAE ID MP K V W LL +CR H N+ LA+RAA EL + P +
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAAT 550
Query: 710 PYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
PY +LAN+Y+ +W+++ +VR+ M I K P S
Sbjct: 551 PYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCS 587
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/518 (26%), Positives = 238/518 (45%), Gaps = 65/518 (12%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK LHA +++ + T+L N + LYSKC A+ F +++S+N I+ A K
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
+ A +LFDE+P+ + VS+N LIS A+ ++ +M GF TL+ +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE-PN 185
A +D+ ++ H + G D V NA ++ Y+K G + AV VF M E +
Sbjct: 147 IAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
EV++ +M+ + +AL +++ MI K ID +L+SVL
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL-------------- 250
Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS---AEVIFSNLPERS 302
+ G+Q H IK GF + H+ + L+D Y+K G D +E +F +
Sbjct: 251 --TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 303 VVSWNVMIAGYGQKYQ-STKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
+V WN MI+GY + S +A++ ++M+ G PD+ + + + AC
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
+SG+++ R +FD MP + S+N M+ Y+Q +
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHG 428
Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ---VHAASLKTASHIDNYVA 442
EA+ L++ M G+ P++ T +LS+CA G ++ G++ + K ++Y
Sbjct: 429 TEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY-- 486
Query: 443 SGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
S +I + + + E AER +P + V W +++
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/533 (25%), Positives = 238/533 (44%), Gaps = 96/533 (18%)
Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVP----- 176
T + S A D+ G+ H L +K + + Y++N ++LY+KCG +A
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 177 --------------------------VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
+F+E+ +P+ V++ ++SG A A+ +F+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
M + +D +LS ++ C D+ +Q+HC ++ GF++
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCD-----RVDLI-------------KQLHCFSVSGGFDS 171
Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPE-RSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
++N+ + Y+K G + A +F + E R VSWN MI YGQ + KA+ L + M
Sbjct: 172 YSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM 231
Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGRE------------------------------ 359
GF+ D T ++L A + GR+
Sbjct: 232 IFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC 291
Query: 360 --MFDS------MPSPSVSSWNAMLSSYSQSEN-HKEAIKLFREMQFRGVKPDRTTLAII 410
M+DS + SP + WN M+S YS +E +EA+K FR+MQ G +PD + +
Sbjct: 292 DGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351
Query: 411 LSSCAAMGILESGKQVHAASLKTASHIDN---YVASGLIGIYSKCQRNELAERVFHRIPE 467
S+C+ + KQ+H ++K SHI + V + LI +Y K + A VF R+PE
Sbjct: 352 TSACSNLSSPSQCKQIHGLAIK--SHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE 409
Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
L+ V +N MI G + + EA + +++M + + P + +F VLS+CA +G++
Sbjct: 410 LNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY 469
Query: 528 HAQIEKDGYVN-DIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMI 578
+++ + + S +I++ + G + A +F D M K +V W ++
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 184/368 (50%), Gaps = 30/368 (8%)
Query: 58 NAILSAQCKSDDLEFAYKLFDEMPE-RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF 116
NA ++ K L A +F M E R+ VSWN++I A ++ KAL++Y +M +GF
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGF 236
Query: 117 VPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK---H 173
TLASV A T+L + GR+ HG +IK G +N +V + L+ Y+KCG
Sbjct: 237 KIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD 296
Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE-ALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
+ VF+E+ P+ V + M+SG + + + E A++ FR M R D S VC
Sbjct: 297 SEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSF-----VCV 351
Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD-LHLSNSLLDMYAKNGDMDSA 291
C + S +Q+H L IK ++ + ++N+L+ +Y K+G++ A
Sbjct: 352 TSAC-----------SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDA 400
Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS 351
+F +PE + VS+N MI GY Q T+A+ L QRM G P+++T + +L AC
Sbjct: 401 RWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHC 460
Query: 352 GDIKTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTT 406
G + G+E F++M P ++ M+ ++ +EA + M + KP
Sbjct: 461 GKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPY---KPGSVA 517
Query: 407 LAIILSSC 414
A +L +C
Sbjct: 518 WAALLGAC 525
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 189/419 (45%), Gaps = 42/419 (10%)
Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
G+ +H L +K + +LSN +++Y+K G + A F + E +V S+NV++ Y
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYA- 85
Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
+ I R++FD +P P S+N +
Sbjct: 86 ----------------------------------KDSKIHIARQLFDEIPQPDTVSYNTL 111
Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
+S Y+ + A+ LF+ M+ G + D TL+ ++++C ++ KQ+H S+
Sbjct: 112 ISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGF 169
Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFMFFK 494
+ V + + YSK A VF+ + EL D V WNSMI + +A +K
Sbjct: 170 DSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYK 229
Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
+M F+ A+VL++ L GRQ H ++ K G+ + VGS LI+ Y KCG
Sbjct: 230 EMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG 289
Query: 555 ---DIYGARQFFDMMHGKNTVTWNEMIHGYAQN-GYGDEAVRLYKDMIASGVKPDDITFV 610
+Y + + F + + V WN MI GY+ N +EAV+ ++ M G +PDD +FV
Sbjct: 290 GCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFV 349
Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMP 669
+ +ACS+ +I H + +I ++G+ +A + D MP
Sbjct: 350 CVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 137/315 (43%), Gaps = 54/315 (17%)
Query: 5 VAGKLLHAHILRNGLFDDTFLCNRLIELYSK---CNNTHSAQHLFDKMPHKDIYSWNAIL 61
+ G+ H +++ G ++ + + LI+ YSK C+ + ++ +F ++ D+ WN ++
Sbjct: 257 IGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMI 316
Query: 62 SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
S Y + +E L E+A+ + +M G P
Sbjct: 317 S----------GYSMNEE--------------------LSEEAVKSFRQMQRIGHRPDDC 346
Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKN-IYVANALLSLYAKCGWTKHAVPVFEE 180
+ V A + L ++ HGL IK + N I V NAL+SLY K G + A VF+
Sbjct: 347 SFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDR 406
Query: 181 MSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES 240
M E N V+F M+ G A+ EAL +++ M+ ++ + ++ +VL CA CG
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAH--CG--- 461
Query: 241 DVFAQSDNKFSRNVHGQQVHCLTIKLGF--EADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
V Q + T+K F E + + ++D+ + G ++ AE +
Sbjct: 462 ------------KVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM 509
Query: 299 PER-SVVSWNVMIAG 312
P + V+W ++
Sbjct: 510 PYKPGSVAWAALLGA 524
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 148/350 (42%), Gaps = 58/350 (16%)
Query: 404 RTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQR--------- 454
+T ++L S A + +GK +HA +K+ Y+++ + +YSKC R
Sbjct: 9 KTFRDLLLKSVAERDLF-TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 455 ----------------------NELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
+A ++F IP+ D V +N++I+G + A +
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
FK+MR+ F+ + ++++C +Q+H G+ + V +A + Y K
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 553 CGDIYGARQ-FFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
G + A F+ M ++ V+WN MI Y Q+ G +A+ LYK+MI G K D T +
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 612 ILTACS-----------HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHE 660
+L A + H L+ G Q H ++D Y+ C G ++
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFH-----QNSHVGSGLIDFYSKCGGCDG----MYD 296
Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
+E + E+ D V+W ++S + N L++ A + ++ P
Sbjct: 297 SEKVFQEI-LSPDLVVWNTMISGYSM--NEELSEEAVKSFRQMQRIGHRP 343
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/644 (30%), Positives = 335/644 (52%), Gaps = 56/644 (8%)
Query: 139 GRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAK 198
GR HG +I+ G I AN L++ YAKCG A +F + + V++ ++++G ++
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 199 TDRVVEA---LEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVH 255
+ + +++FR M + + ++ +L+ + ++++ +
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIF----------------KAESSLQSSTV 136
Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGY-- 313
G+Q H L +K+ D+++ SL+ MY K G ++ +F+ +PER+ +W+ M++GY
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 314 -GQKYQSTKAIELLQRMKSCGFEPDEVTS--INMLVACVRSG--------DIKTGR---- 358
G+ ++ K L R K G + D V + ++ L A + G IK G
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 359 --------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
+MFDS + +W+AM++ YSQ+ EA+KLF M
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
G+KP T+ +L++C+ + LE GKQ+H+ LK + + L+ +Y+K A
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
+ F + E D+ W S+I+G NS + EA + +++M+ + P + A+VL +C+ L
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
++ G+QVH K G+ ++ +GSAL MY KCG + F K+ V+WN MI
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMI 496
Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
G + NG GDEA+ L+++M+A G++PDD+TFV I++ACSH G V+ G FN M G+
Sbjct: 497 SGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGL 556
Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAE 698
+P +DHY CM+D L RAG EA+ I+ +W +LLS+C+ H L A E
Sbjct: 557 DPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGE 616
Query: 699 ELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKD 742
+L L + S+ Y L+ IY++LGR D+ V + M N + K+
Sbjct: 617 KLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKE 660
Score = 269 bits (688), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 166/603 (27%), Positives = 292/603 (48%), Gaps = 92/603 (15%)
Query: 5 VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
VAG+ +H I+R G N L+ Y+KC A +F+ + KD+ SWN++++
Sbjct: 31 VAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGY 90
Query: 65 CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
++ + +Y + + ++ +M + +P TLA
Sbjct: 91 SQNGGISSSYTV----------------------------MQLFREMRAQDILPNAYTLA 122
Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
+FKA ++L GR+ H LV+K+ +IYV +L+ +Y K G + + VF M E
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD-VF 243
N T++ M+SG A RV EA+++F L +R+ G +SD VF
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE------------------GSDSDYVF 224
Query: 244 AQSDNKFSRNVH---GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
+ + ++ G+Q+HC+TIK G + LSN+L+ MY+K ++ A +F + +
Sbjct: 225 TAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGD 284
Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------ 348
R+ ++W+ M+ GY Q +S +A++L RM S G +P E T + +L AC
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344
Query: 349 -----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENH 385
++G + R+ FD + V+ W +++S Y Q+ ++
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 404
Query: 386 KEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGL 445
+EA+ L+R M+ G+ P+ T+A +L +C+++ LE GKQVH ++K ++ + S L
Sbjct: 405 EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSAL 464
Query: 446 IGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
+YSKC E VF R P D+V WN+MI+GLS N EA F++M M P
Sbjct: 465 STMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Query: 506 FSFATVLSSCAKLSSSFQG----RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ 561
+F ++S+C+ +G + QI D V+ + ++++ + G + A++
Sbjct: 525 VTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHY---ACMVDLLSRAGQLKEAKE 581
Query: 562 FFD 564
F +
Sbjct: 582 FIE 584
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 211/457 (46%), Gaps = 80/457 (17%)
Query: 2 KAHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
++ G+ HA +++ F D ++ L+ +Y K +F MP ++ Y+W+ ++
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 62 SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
S +E A K+F NL L EK + S+ +V T
Sbjct: 192 SGYATRGRVEEAIKVF------------NLF-------LREK-----EEGSDSDYVFT-- 225
Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
+V + A + V GR+ H + IK GL + ++NAL+++Y+KC A +F+
Sbjct: 226 ---AVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSS 282
Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
+ N +T++AM++G ++ +EA+++F M + ++ VL C+ + C +E
Sbjct: 283 GDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACS-DICYLE-- 339
Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
G+Q+H +KLGFE L + +L+DMYAK G + A F L ER
Sbjct: 340 -------------EGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------------- 348
V W +I+GY Q + +A+ L +RMK+ G P++ T ++L AC
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446
Query: 349 ----------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHK 386
+ G ++ G +F P+ V SWNAM+S S +
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 506
Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
EA++LF EM G++PD T I+S+C+ G +E G
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 218/465 (46%), Gaps = 64/465 (13%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ +H ++NGL L N L+ +YSKC + + A +FD ++ +W+A
Sbjct: 240 GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSA------- 292
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
+++ +NG +A+ ++++M + G P+ T+ V
Sbjct: 293 ------------------------MVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
A + + +E G++ H ++K+G +++++ AL+ +YAK G A F+ + E +
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
+T+++SG + EAL ++R M + + +++SVL C+
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS-------------- 434
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
+ G+QVH TIK GF ++ + ++L MY+K G ++ ++F P + VVSW
Sbjct: 435 --SLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSW 492
Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP- 365
N MI+G Q +A+EL + M + G EPD+VT +N++ AC G ++ G F+ M
Sbjct: 493 NAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSD 552
Query: 366 ----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
P V + M+ S++ KEA + + I+LS+C G E
Sbjct: 553 QIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESAN---IDHGLCLWRILLSACKNHGKCE 609
Query: 422 ----SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVF 462
+G+++ A + +S YV L GIY+ R ERV+
Sbjct: 610 LGVYAGEKLMALGSRESS---TYVQ--LSGIYTALGRMRDVERVW 649
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 5/234 (2%)
Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAE 459
+ P +TL L+ + L +G+ VH ++T + A+ L+ Y+KC + A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 460 RVFHRIPELDIVCWNSMIAGLSLN---SLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
+F+ I D+V WNS+I G S N S F++MR ++ P ++ A + + +
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
L SS GRQ HA + K DI+V ++L+ MYCK G + + F M +NT TW+
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVK--PDDITFVAILTACSHSGLVDVGVEI 628
M+ GYA G +EA++++ + + D F A+L++ + + V +G +I
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 17/239 (7%)
Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIY 557
Q E+ P + L+ ++ + GR VH QI + G I + L+ Y KCG +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 558 GARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA---VRLYKDMIASGVKPDDITFVAILT 614
A F+ + K+ V+WN +I GY+QNG + ++L+++M A + P+ T I
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHY--TCMIDCLGRAGHFHEAEMLIDEMPCKD 672
A S VG + + L + D Y T ++ +AG + + MP +
Sbjct: 127 AESSLQSSTVGRQ---AHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ER 182
Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNS-APY-------SLLANIYSSLGR 723
+ W ++S V A + R + S + Y SL A IY LGR
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/632 (30%), Positives = 331/632 (52%), Gaps = 61/632 (9%)
Query: 153 KNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRL- 211
+N+ ++ L++LY G A F+ + + + M+SG + E + F L
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 212 MIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEAD 271
M+ ++ D + SVL C + G ++HCL +K GF D
Sbjct: 144 MLSSGLTPDYRTFPSVLKAC-------------------RTVIDGNKIHCLALKFGFMWD 184
Query: 272 LHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS 331
++++ SL+ +Y++ + +A ++F +P R + SWN MI+GY Q + +A+ L +++
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA 244
Query: 332 CGFEPDEVTSINMLVACVRSGDIKTG---------------------------------- 357
D VT +++L AC +GD G
Sbjct: 245 M----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRD 300
Query: 358 -REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
+++FD M + SWN+++ +Y +E AI LF+EM+ ++PD TL + S +
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360
Query: 417 MGILESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNS 475
+G + + + V +L+ +++ + + ++ +Y+K + A VF+ +P D++ WN+
Sbjct: 361 LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 420
Query: 476 MIAGLSLNSLDIEAFMFFKQMRQ-NEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
+I+G + N EA + M + E+ Q ++ +VL +C++ + QG ++H ++ K+
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLY 594
G D+FV ++L +MY KCG + A F + N+V WN +I + +G+G++AV L+
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 540
Query: 595 KDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGR 654
K+M+ GVKPD ITFV +L+ACSHSGLVD G F MQ D+G+ P L HY CM+D GR
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 600
Query: 655 AGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLL 714
AG A I M + D IW LLS+CR+H NV L K A+E LF ++P++ + LL
Sbjct: 601 AGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLL 660
Query: 715 ANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
+N+Y+S G+W+ + +R + + K P +S
Sbjct: 661 SNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 172/643 (26%), Positives = 299/643 (46%), Gaps = 112/643 (17%)
Query: 32 LYSKCNNTHSAQHLFDKMP-HKDIYSWNAILSAQ-----CKSDDLEFAYKLFDEMPERNV 85
L+ C N SA+ L ++ K I N +SA+ C ++ A FD + R+V
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQ--NVCISAKLVNLYCYLGNVALARHTFDHIQNRDV 117
Query: 86 VSWNNLISALVRNGLEEKALSVYNK-MSNEGFVPTHITLASVFKASTALLDVEHGRRCHG 144
+WN +IS R G + + ++ M + G P + T SV KA ++D G + H
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 145 LVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVE 204
L +K G ++YVA +L+ LY++ +A +F+EM + ++ AM+SG ++ E
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 205 ALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTI 264
AL + + ++DSV++ S+L C G F+R V +H +I
Sbjct: 235 ALTLSNGL----RAMDSVTVVSLLSACTEAG-------------DFNRGV---TIHSYSI 274
Query: 265 KLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIE 324
K G E++L +SN L+D+YA+ G + + +F + R ++SWN +I Y Q +AI
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 325 LLQRMKSCGFEPDEVTSINMLVACVRSGDIK----------------------------- 355
L Q M+ +PD +T I++ + GDI+
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394
Query: 356 -------TGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG-VKPDRTTL 407
+ R +F+ +P+ V SWN ++S Y+Q+ EAI+++ M+ G + ++ T
Sbjct: 395 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454
Query: 408 AIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPE 467
+L +C+ G L G ++H LK ++D +V + L +Y KC R E A +F++IP
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 468 LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
++ V WN++IA + +A M FK+M + P +F T+LS+C+
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS----------- 563
Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVT-----WNEMIHGYA 582
H+ + +G +C F+MM +T + M+ Y
Sbjct: 564 HSGLVDEG-------------QWC-----------FEMMQTDYGITPSLKHYGCMVDMYG 599
Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVG 625
+ G + A++ K M ++PD + A+L+AC G VD+G
Sbjct: 600 RAGQLETALKFIKSM---SLQPDASIWGALLSACRVHGNVDLG 639
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 215/457 (47%), Gaps = 88/457 (19%)
Query: 5 VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
+ G +H L+ G D ++ LI LYS+ +A+ LFD+MP +D+ SWNA++S
Sbjct: 167 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226
Query: 65 CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
C+S + + A L NGL +A+ +T+
Sbjct: 227 CQSGNAKEALTL--------------------SNGL--RAMD-------------SVTVV 251
Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
S+ A T D G H IK GL+ ++V+N L+ LYA+ G + VF+ M
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
+ +++ +++ ++ + A+ +F+ M + D ++L S+ + ++ G
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG--------- 362
Query: 245 QSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
D + R+V G T++ G F D+ + N+++ MYAK G +DSA +F+ LP V
Sbjct: 363 --DIRACRSVQG-----FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDV 415
Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGRE--- 359
+SWN +I+GY Q +++AIE+ M+ G ++ T +++L AC ++G ++ G +
Sbjct: 416 ISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHG 475
Query: 360 --------------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKE 387
+F +P + WN +++ + + ++
Sbjct: 476 RLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEK 535
Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK 424
A+ LF+EM GVKPD T +LS+C+ G+++ G+
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ 572
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 154/320 (48%), Gaps = 22/320 (6%)
Query: 420 LESGKQVHAASLKTASHIDNY-VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIA 478
L+S K +HA L + I N +++ L+ +Y LA F I D+ WN MI+
Sbjct: 67 LQSAKCLHA-RLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 479 GLSL---NSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDG 535
G +S I F F M + + P +F +VL +C + G ++H K G
Sbjct: 126 GYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCLALKFG 180
Query: 536 YVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYK 595
++ D++V ++LI +Y + + AR FD M ++ +WN MI GY Q+G EA+ L
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 596 DMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRA 655
+ A D +T V++L+AC+ +G + GV I +S + HG+E L +ID
Sbjct: 241 GLRAM----DSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYAEF 295
Query: 656 GHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEE--LFRLDPKNSAPYSL 713
G + + + D M + D + W ++ + L+ A +E L R+ P S
Sbjct: 296 GRLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS- 353
Query: 714 LANIYSSLGRWDDLRAVREL 733
LA+I S LG D+RA R +
Sbjct: 354 LASILSQLG---DIRACRSV 370
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 154/395 (38%), Gaps = 86/395 (21%)
Query: 6 AGKLLHAHILRNGLF-DDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
A + + LR G F +D + N ++ +Y+K SA+ +F+ +P+ D+ SWN I
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI---- 421
Query: 65 CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI-TL 123
IS +NG +A+ +YN M EG + + T
Sbjct: 422 ---------------------------ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454
Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
SV A + + G + HG ++K GL +++V +L +Y KCG + A+ +F ++
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
N V + +++ +A+ +F+ M+ + V D ++ ++L C+ G E
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE---- 570
Query: 244 AQSDNKFSRNVHGQQ-VHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
GQ + G L ++DMY + G +++A
Sbjct: 571 ------------GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA----------- 607
Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
L+ +KS +PD +L AC G++ G+ +
Sbjct: 608 -----------------------LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 644
Query: 363 SM--PSPSVSSWNAMLSSYSQSENHKEAIKLFREM 395
+ P ++ +LS+ S E + R +
Sbjct: 645 HLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 53/279 (18%)
Query: 510 TVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK 569
T+ C L S+ + +HA++ + ++ + + L+ +YC G++ AR FD + +
Sbjct: 59 TLFRYCTNLQSA---KCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 570 NTVTWNEMIHGYAQNGYGDEAVRLYK-DMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
+ WN MI GY + G E +R + M++SG+ PD TF ++L AC ++D G +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC--RTVID-GNKI 172
Query: 629 FNSMQLDHGVEPILDHYTC--MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
+ + L G + D Y +I R A +L DEMP +D W ++S
Sbjct: 173 -HCLALKFGF--MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMISGYCQ 228
Query: 687 HANVRLAKRAAEELFRLDPKNSA-------------------PYSL-------------L 714
N + A + L +D YS+ L
Sbjct: 229 SGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 715 ANIYSSLGRWDDLRA------VRELMSENCIVKDPAYSL 747
++Y+ GR D + VR+L+S N I+K AY L
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK--AYEL 325
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 342 bits (878), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 219/718 (30%), Positives = 347/718 (48%), Gaps = 94/718 (13%)
Query: 32 LYSKCNNTHSAQ--HLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWN 89
L +CNN H A H + I +C D++ WN
Sbjct: 24 LKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIK---------------EWN 68
Query: 90 NLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKI 149
IS+ +R G +AL V+ +M V
Sbjct: 69 VAISSYMRTGRCNEALRVFKRMPRWSSVSY------------------------------ 98
Query: 150 GLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMF 209
N ++S Y + G + A +F+EM E + V++ M+ G + + +A E+F
Sbjct: 99 ---------NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 149
Query: 210 RLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE 269
+M + D S +++L A+ GC + + F R V
Sbjct: 150 EIMPER----DVCSWNTMLSGYAQNGC------VDDARSVFDRMPEKNDVSW-------- 191
Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
N+LL Y +N M+ A ++F + ++VSWN ++ G+ +K + +A + M
Sbjct: 192 ------NALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
D V+ ++ +SG I R++FD P V +W AM+S Y Q+ +EA
Sbjct: 246 NV----RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAR 301
Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA-SGLIGI 448
+LF +M P+R ++ + G ++ + A L N + +I
Sbjct: 302 ELFDKM------PERNEVSW---NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITG 352
Query: 449 YSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
Y++C + A+ +F ++P+ D V W +MIAG S + EA F QM + + SF
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 509 ATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
++ LS+CA + + G+Q+H ++ K GY FVG+AL+ MYCKCG I A F M G
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG 472
Query: 569 KNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEI 628
K+ V+WN MI GY+++G+G+ A+R ++ M G+KPDD T VA+L+ACSH+GLVD G +
Sbjct: 473 KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY 532
Query: 629 FNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
F +M D+GV P HY CM+D LGRAG +A L+ MP + D IW LL + R+H
Sbjct: 533 FYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Query: 689 NVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
N LA+ AA+++F ++P+NS Y LL+N+Y+S GRW D+ +R M + + K P YS
Sbjct: 593 NTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYS 650
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 247/526 (46%), Gaps = 72/526 (13%)
Query: 27 NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
N I Y + + A +F +MP S+N ++S ++ + E A KLFDEMPER++V
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 87 SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
SWN +I VRN KA ++ M
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIMP---------------------------------- 153
Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
++++ N +LS YA+ G A VF+ M E N+V++ A++S + ++ EA
Sbjct: 154 -----ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEAC 208
Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
+F+ A+ VS + +LG ++ VE+ F S N R+V V TI
Sbjct: 209 MLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMN--VRDV----VSWNTIIT 258
Query: 267 GF-------EA----------DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
G+ EA D+ +++ Y +N ++ A +F +PER+ VSWN M
Sbjct: 259 GYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAM 318
Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSIN-MLVACVRSGDIKTGREMFDSMPSPS 368
+AGY Q + A EL M V++ N M+ + G I + +FD MP
Sbjct: 319 LAGYVQGERMEMAKELFDVMPC-----RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373
Query: 369 VSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHA 428
SW AM++ YSQS + EA++LF +M+ G + +R++ + LS+CA + LE GKQ+H
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 429 ASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE 488
+K +V + L+ +Y KC E A +F + DIV WN+MIAG S +
Sbjct: 434 RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493
Query: 489 AFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
A FF+ M++ + P + VLS+C+ +GRQ + +D
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQD 539
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 193/400 (48%), Gaps = 32/400 (8%)
Query: 27 NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
N L+ + K A+ FD M +D+ SWN I++ +S ++ A +LFDE P ++V
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 87 SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
+W ++S ++N + E+A +++KM V + LA + + E +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKE--------L 334
Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
+ +N+ N +++ YA+CG A +F++M + + V++ AM++G +++ EAL
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 394
Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL 266
+F M R+ ++ S SS L CA DV A G+Q+H +K
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCA--------DVVALE--------LGKQLHGRLVKG 438
Query: 267 GFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELL 326
G+E + N+LL MY K G ++ A +F + + +VSWN MIAGY + A+
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 327 QRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPS-----PSVSSWNAMLSSYSQ 381
+ MK G +PD+ T + +L AC +G + GR+ F +M P+ + M+ +
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
+ ++A L + M F +PD +L + G E
Sbjct: 559 AGLLEDAHNLMKNMPF---EPDAAIWGTLLGASRVHGNTE 595
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 143/297 (48%), Gaps = 21/297 (7%)
Query: 27 NRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVV 86
N ++ Y + A+ LFD MP +++ +WN +++ + + A LFD+MP+R+ V
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 87 SWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLV 146
SW +I+ ++G +AL ++ +M EG + +S ++ +E G++ HG +
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435
Query: 147 IKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEAL 206
+K G + +V NALL +Y KCG + A +F+EM+ + V++ M++G ++ AL
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495
Query: 207 EMFRLMIRKAVSIDSVSLSSVLGVCAREGC---------------GV--ESDVFAQSDNK 249
F M R+ + D ++ +VL C+ G GV S +A +
Sbjct: 496 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 555
Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEV----IFSNLPERS 302
R + H L + FE D + +LL +G+ + AE IF+ PE S
Sbjct: 556 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENS 612
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 33/189 (17%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK LH +++ G F+ N L+ +Y KC + A LF +M KDI SWN
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT------- 480
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
+I+ R+G E AL + M EG P T+ +V
Sbjct: 481 ------------------------MIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 127 FKASTALLDVEHGRR-CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS-EP 184
A + V+ GR+ + + G+ N ++ L + G + A + + M EP
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 185 NEVTFTAMM 193
+ + ++
Sbjct: 577 DAAIWGTLL 585
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 211/687 (30%), Positives = 349/687 (50%), Gaps = 60/687 (8%)
Query: 104 ALSVYNKMSNEGFVPT-HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALL 162
A+S + M+ +G P +T +S+ K+ D G+ H +I+ ++ + + N+L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 163 SLYAKCGWTKHAVPVFEEM---SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSI 219
SLY+K G + A VFE M + + V+++AMM+ R ++A+++F + +
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 220 DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG-FEADLHLSNSL 278
+ ++V+ C+ SD G+ +K G FE+D+ + SL
Sbjct: 165 NDYCYTAVIRACS------NSDFVGV----------GRVTLGFLMKTGHFESDVCVGCSL 208
Query: 279 LDMYAKN-GDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPD 337
+DM+ K ++A +F + E +VV+W +MI Q +AI M GFE D
Sbjct: 209 IDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268
Query: 338 ------------------------------------EVTSINMLVACVRSGDIKTGREMF 361
E + ++M C G + R++F
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVF 328
Query: 362 DSMPSPSVSSWNAMLSSYSQSEN-HKEAIKLFREMQFRG-VKPDRTTLAIILSSCAAMGI 419
D M SV SW A+++ Y ++ N EAI LF EM +G V+P+ T + +C +
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 420 LESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAG 479
GKQV + K ++ VA+ +I ++ K R E A+R F + E ++V +N+ + G
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 480 LSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVND 539
N +AF ++ + E+ + F+FA++LS A + S +G Q+H+Q+ K G +
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 540 IFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIA 599
V +ALI MY KCG I A + F+ M +N ++W MI G+A++G+ + + MI
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE 568
Query: 600 SGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFH 659
GVKP+++T+VAIL+ACSH GLV G FNSM DH ++P ++HY CM+D L RAG
Sbjct: 569 EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 628
Query: 660 EAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYS 719
+A I+ MP + D ++W L +CR+H+N L K AA ++ LDP A Y L+NIY+
Sbjct: 629 DAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYA 688
Query: 720 SLGRWDDLRAVRELMSENCIVKDPAYS 746
G+W++ +R M E +VK+ S
Sbjct: 689 CAGKWEESTEMRRKMKERNLVKEGGCS 715
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 152/603 (25%), Positives = 269/603 (44%), Gaps = 89/603 (14%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GKL+HA ++ + D+ L N LI LYSK ++ A+ +F+ M
Sbjct: 81 GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR---------------- 124
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
+R+VVSW+ +++ NG E A+ V+ + G VP +V
Sbjct: 125 ------------RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172
Query: 127 FKASTALLDVEHGRRCHGLVIKIG-LDKNIYVANALLSLYAKCGWT-KHAVPVFEEMSEP 184
+A + V GR G ++K G + ++ V +L+ ++ K + ++A VF++MSE
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL 232
Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
N VT+T M++ + EA+ F M+ D +LSSV CA
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA------------ 280
Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK---NGDMDSAEVIFSNLPER 301
+ G+Q+H I+ G D+ SL+DMYAK +G +D +F + +
Sbjct: 281 ----ELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 302 SVVSWNVMIAGYGQKYQ-STKAIELLQRMKSCG-FEPDEVTSINMLVACVRSGDIKTGRE 359
SV+SW +I GY + +T+AI L M + G EP+ T + AC D + G++
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
+ F+S+ ++ S+N L ++ N
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454
Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
++A KL E+ R + T A +LS A +G + G+Q+H+ +K + V +
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
LI +YSKC + A RVF+ + +++ W SMI G + + I F QM + + P
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 505 QFSFATVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFF 563
+ ++ +LS+C+ + +G R ++ E + + ++++ C+ G + A +F
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634
Query: 564 DMM 566
+ M
Sbjct: 635 NTM 637
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 200/425 (47%), Gaps = 56/425 (13%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK LH+ +R+GL DD C+ L+++Y+KC SA
Sbjct: 288 GKQLHSWAIRSGLVDDV-ECS-LVDMYAKC-------------------------SADGS 320
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRN-GLEEKALSVYNKMSNEGFV-PTHITLA 124
DD K+FD M + +V+SW LI+ ++N L +A++++++M +G V P H T +
Sbjct: 321 VDDCR---KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
S FKA L D G++ G K GL N VAN+++S++ K + A FE +SE
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
N V++ + G + +A ++ + + + + + + +S+L A G
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG--------- 488
Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
S K G+Q+H +KLG + + N+L+ MY+K G +D+A +F+ + R+V+
Sbjct: 489 -SIRK------GEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI 541
Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
SW MI G+ + + + +E +M G +P+EVT + +L AC G + G F+SM
Sbjct: 542 SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601
Query: 365 -----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGI 419
P + + M+ ++ +A + M F+ D L +C
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA---DVLVWRTFLGACRVHSN 658
Query: 420 LESGK 424
E GK
Sbjct: 659 TELGK 663
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 180/371 (48%), Gaps = 25/371 (6%)
Query: 270 ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM 329
DL + S LD+ A++G V FS+L + + + + + K + IE
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLG----KLVHARLIEF---- 91
Query: 330 KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM---PSPSVSSWNAMLSSYSQSENHK 386
EPD V +++ +SGD ++F++M V SW+AM++ Y +
Sbjct: 92 ---DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGREL 148
Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG-- 444
+AIK+F E G+ P+ ++ +C+ + G+ +KT H ++ V G
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG-HFESDVCVGCS 207
Query: 445 LIGIYSKCQRN-ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYP 503
LI ++ K + + E A +VF ++ EL++V W MI EA FF M +
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 504 TQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKC---GDIYGAR 560
+F+ ++V S+CA+L + G+Q+H+ + G V+D V +L++MY KC G + R
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCR 325
Query: 561 QFFDMMHGKNTVTWNEMIHGYAQN-GYGDEAVRLYKDMIASG-VKPDDITFVAILTACSH 618
+ FD M + ++W +I GY +N EA+ L+ +MI G V+P+ TF + AC +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 619 SGLVDVGVEIF 629
VG ++
Sbjct: 386 LSDPRVGKQVL 396
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 339 bits (869), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 198/663 (29%), Positives = 330/663 (49%), Gaps = 59/663 (8%)
Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
T FK ST+ + H + H +I G +I + L + G +A +F +
Sbjct: 22 TYLDFFKRSTS---ISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78
Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
P+ F +M G + + +L +F +RK+ + S + + A G
Sbjct: 79 QRPDVFLFNVLMRGFSVNESPHSSLSVFA-HLRKSTDLKPNSSTYAFAISAASGF----- 132
Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
D++ R +HGQ V G +++L L ++++ MY K ++ A +F +PE+
Sbjct: 133 ----RDDRAGRVIHGQAV-----VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK 183
Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRM--KSCGFEPDEVTSINMLVACV---------- 349
+ WN MI+GY + ++I++ + + +SC D T +++L A
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVFRDLINESCT-RLDTTTLLDILPAVAELQELRLGMQ 242
Query: 350 -------------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSEN 384
+ G IK G +F P + ++NAM+ Y+ +
Sbjct: 243 IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE 302
Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
+ ++ LF+E+ G + +TL ++ + ++ + +H LK+ V++
Sbjct: 303 TELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTA 359
Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
L +YSK E A ++F PE + WN+MI+G + N L +A F++M+++E P
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFD 564
+ +LS+CA+L + G+ VH + + + I+V +ALI MY KCG I AR+ FD
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 565 MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDV 624
+M KN VTWN MI GY +G G EA+ ++ +M+ SG+ P +TF+ +L ACSH+GLV
Sbjct: 480 LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKE 539
Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSC 684
G EIFNSM +G EP + HY CM+D LGRAGH A I+ M + +WE LL +C
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC 599
Query: 685 RLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPA 744
R+H + LA+ +E+LF LDP N + LL+NI+S+ + VR+ + + K P
Sbjct: 600 RIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659
Query: 745 YSL 747
Y+L
Sbjct: 660 YTL 662
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/591 (24%), Positives = 264/591 (44%), Gaps = 82/591 (13%)
Query: 11 HAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDL 70
HA I+ +G +D L +L + S + A+ +F + D++ +N ++
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRG------- 92
Query: 71 EFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKA 129
F+ +E P +LSV+ + + P T A A
Sbjct: 93 -FS---VNESPH--------------------SSLSVFAHLRKSTDLKPNSSTYAFAISA 128
Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
++ D GR HG + G D + + + ++ +Y K + A VF+ M E + + +
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVS-IDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
M+SG K + VE++++FR +I ++ + +D+ +L +L A
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA---------------- 232
Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
+ G Q+H L K G + ++ + +Y+K G + +F + +V++N
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292
Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA-------------CVRS---- 351
MI GY ++ ++ L + + G T ++++ C++S
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLS 352
Query: 352 ---------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
+I++ R++FD P S+ SWNAM+S Y+Q+ ++AI LFREMQ
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
P+ T+ ILS+CA +G L GK VH T YV++ LIG+Y+KC
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIA 472
Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
A R+F + + + V WN+MI+G L+ EA F +M + + PT +F VL +C+
Sbjct: 473 EARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACS 532
Query: 517 KLSSSFQGRQV-HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
+G ++ ++ I + G+ + + ++++ + G + A QF + M
Sbjct: 533 HAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 176/365 (48%), Gaps = 27/365 (7%)
Query: 55 YSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNE 114
Y +S K ++ LF E + ++V++N +I NG E +LS++ ++
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 115 GFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHA 174
G TL S+ S L+ + HG +K + V+ AL ++Y+K + A
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 175 VPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCARE 234
+F+E E + ++ AM+SG + +A+ +FR M + S + V+++ +L CA+
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 235 GCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVI 294
G A S G+ VH L FE+ +++S +L+ MYAK G + A +
Sbjct: 434 G--------ALS--------LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
F + +++ V+WN MI+GYG Q +A+ + M + G P VT + +L AC +G +
Sbjct: 478 FDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLV 537
Query: 355 KTGREMFDSMP-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAI 409
K G E+F+SM PSV + M+ ++ + + A++ M ++P +
Sbjct: 538 KEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMS---IEPGSSVWET 594
Query: 410 ILSSC 414
+L +C
Sbjct: 595 LLGAC 599
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 124/282 (43%), Gaps = 46/282 (16%)
Query: 10 LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
+H + L++ + L +YSK N SA+ LFD+ P K + SWNA++
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI-------- 392
Query: 70 LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
S +NGL E A+S++ +M F P +T+ + A
Sbjct: 393 -----------------------SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
L + G+ H LV + +IYV+ AL+ +YAKCG A +F+ M++ NEVT+
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489
Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
M+SG + EAL +F M+ ++ V+ VL C+ G + + D
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAG------LVKEGDEI 543
Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
F+ +H + GFE + ++D+ + G + A
Sbjct: 544 FNSMIH---------RYGFEPSVKHYACMVDILGRAGHLQRA 576
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 54 IYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSN 113
IY A++ K + A +LFD M ++N V+WN +IS +G ++AL+++ +M N
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 114 EGFVPTHITLASVFKA-STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
G PT +T V A S A L E + ++ + G + ++ ++ + + G +
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 173 HAVPVFEEMS-EPNEVTFTAMM 193
A+ E MS EP + ++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLL 596
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 339 bits (869), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 183/540 (33%), Positives = 292/540 (54%), Gaps = 42/540 (7%)
Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNG-DMDSAEVIFSNLPERSV 303
Q+ NK +HG Q H +K G E D ++ NSLL +Y K G M +F +
Sbjct: 69 QTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDA 128
Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR----- 358
+SW M++GY + KA+E+ M S G + +E T + + AC G+++ GR
Sbjct: 129 ISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGV 188
Query: 359 ------------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
+FD MP P V W A+LS++S+++ ++EA
Sbjct: 189 VITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEA 248
Query: 389 IKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
+ LF M + +G+ PD +T +L++C + L+ GK++H + + V S L+
Sbjct: 249 LGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLD 308
Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFS 507
+Y KC A +VF+ + + + V W++++ G N +A F++M + ++Y
Sbjct: 309 MYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----C 364
Query: 508 FATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH 567
F TVL +CA L++ G+++H Q + G ++ V SALI++Y K G I A + + M
Sbjct: 365 FGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS 424
Query: 568 GKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVE 627
+N +TWN M+ AQNG G+EAV + DM+ G+KPD I+F+AILTAC H+G+VD G
Sbjct: 425 IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRN 484
Query: 628 IFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLH 687
F M +G++P +HY+CMID LGRAG F EAE L++ C++D +W VLL C +
Sbjct: 485 YFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAAN 544
Query: 688 ANV-RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
A+ R+A+R A+ + L+PK Y LL+N+Y ++GR D +R+LM + K S
Sbjct: 545 ADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQS 604
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 176/350 (50%), Gaps = 29/350 (8%)
Query: 73 AYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM-SNEGFVPTHITLASVFKAST 131
A ++FDEMPE +V+ W ++SA +N L E+AL ++ M +G VP T +V A
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 132 ALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTA 191
L ++ G+ HG +I G+ N+ V ++LL +Y KCG + A VF MS+ N V+++A
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 192 MMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFS 251
++ G + +A+E+FR M K D +VL CA + +
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACA-----------GLAAVRLG 381
Query: 252 RNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIA 311
+ +HGQ V + G ++ + ++L+D+Y K+G +DSA ++S + R++++WN M++
Sbjct: 382 KEIHGQYV-----RRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLS 436
Query: 312 GYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-----S 366
Q + +A+ M G +PD ++ I +L AC +G + GR F M
Sbjct: 437 ALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIK 496
Query: 367 PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
P ++ M+ ++ +EA L + R D + ++L CAA
Sbjct: 497 PGTEHYSCMIDLLGRAGLFEEAENLLERAECRN---DASLWGVLLGPCAA 543
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 213/479 (44%), Gaps = 57/479 (11%)
Query: 92 ISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGL 151
I L + G +A+ + N + T AS+ + + HG + H V+K GL
Sbjct: 33 ILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGL 92
Query: 152 DKNIYVANALLSLYAKCG-WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFR 210
+ + V N+LLSLY K G + VF+ + +++T+MMSG V+ALE+F
Sbjct: 93 ETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFV 152
Query: 211 LMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEA 270
M+ + + +LSS + C+ G + + R HG + I GFE
Sbjct: 153 EMVSFGLDANEFTLSSAVKACSELG-----------EVRLGRCFHG-----VVITHGFEW 196
Query: 271 DLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRM- 329
+ +S++L +Y N + A +F +PE V+ W +++ + + +A+ L M
Sbjct: 197 NHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMH 256
Query: 330 KSCGFEPDEVTSINMLVAC-----------------------------------VRSGDI 354
+ G PD T +L AC + G +
Sbjct: 257 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 355 KTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
+ R++F+ M + SW+A+L Y Q+ H++AI++FREM+ + D +L +C
Sbjct: 317 REARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKAC 372
Query: 415 AAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWN 474
A + + GK++H ++ + V S LI +Y K + A RV+ ++ +++ WN
Sbjct: 373 AGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWN 432
Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEK 533
+M++ L+ N EA FF M + + P SF +L++C +GR + K
Sbjct: 433 AMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK 491
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 204/457 (44%), Gaps = 86/457 (18%)
Query: 5 VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
+ G HAH++++GL D + N L+ LY K
Sbjct: 78 IHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLG--------------------------- 110
Query: 65 CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
+ ++FD ++ +SW +++S V KAL V+ +M + G TL+
Sbjct: 111 ---PGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLS 167
Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
S KA + L +V GR HG+VI G + N ++++ L LY A VF+EM EP
Sbjct: 168 SAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEP 227
Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVF 243
+ + +TA++S +K D EAL +F M R K + D + +VL C
Sbjct: 228 DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG----------- 276
Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
R G+++H I G +++ + +SLLDMY K G + A +F+ + +++
Sbjct: 277 -----NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-------------- 349
VSW+ ++ GY Q + KAIE+ + M+ E D +L AC
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQ 387
Query: 350 ---------------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
+SG I + ++ M ++ +WNAMLS+ +Q+ +EA
Sbjct: 388 YVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEA 447
Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQ 425
+ F +M +G+KPD + IL++C G+++ G+
Sbjct: 448 VSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRN 484
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 151/360 (41%), Gaps = 58/360 (16%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +H ++ NG+ + + + L+++Y KC + A+ +F+ M K
Sbjct: 284 GKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK-------------- 329
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
N VSW+ L+ +NG EKA+ ++ +M + +V
Sbjct: 330 -----------------NSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----CFGTV 368
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
KA L V G+ HG ++ G N+ V +AL+ LY K G A V+ +MS N
Sbjct: 369 LKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNM 428
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
+T+ AM+S LA+ R EA+ F M++K + D +S ++L C G E
Sbjct: 429 ITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDE------- 481
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS- 305
RN IK G E H S ++D+ + G + AE + R+ S
Sbjct: 482 ----GRNYFVLMAKSYGIKPGTE---HYS-CMIDLLGRAGLFEEAENLLERAECRNDASL 533
Query: 306 WNVMIAGYGQKYQSTKAIE-LLQRMKSCGFEPDEVTSI----NMLVACVRSGDIKTGREM 360
W V++ +++ E + +RM EP S NM A R GD R++
Sbjct: 534 WGVLLGPCAANADASRVAERIAKRMME--LEPKYHMSYVLLSNMYKAIGRHGDALNIRKL 591
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 132/299 (44%), Gaps = 4/299 (1%)
Query: 387 EAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLI 446
EAI++ + A +L +C + G Q HA +K+ D V + L+
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 447 GIYSKCQRN-ELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQ 505
+Y K RVF D + W SM++G ++A F +M + +
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE 163
Query: 506 FSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDM 565
F+ ++ + +C++L GR H + G+ + F+ S L +Y + AR+ FD
Sbjct: 164 FTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE 223
Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKPDDITFVAILTACSHSGLVDV 624
M + + W ++ +++N +EA+ L+ M G+ PD TF +LTAC + +
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 625 GVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
G EI + + +G+ + + ++D G+ G EA + + M K + V W LL
Sbjct: 284 GKEIHGKL-ITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGG 340
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 338 bits (867), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 204/690 (29%), Positives = 344/690 (49%), Gaps = 54/690 (7%)
Query: 83 RNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTA-----LLDVE 137
R++ +++L+ + + + ++++ + P H T++ +A+T L VE
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 138 HGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLA 197
+ H + K GLD+ +YV +LL+LY K G A +F+EM E + V + A++ G +
Sbjct: 71 Q-VQTH--LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 198 KTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ 257
+ +A ++F +M+++ S + +L ++L C + CG S G+
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQ--CGFVS--------------QGR 171
Query: 258 QVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKY 317
VH + K G E D + N+L+ Y+K ++ SAEV+F + ++S VSWN MI Y Q
Sbjct: 172 SVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 231
Query: 318 QSTKAIELLQRMKSCGFEPDEVTSINMLVACV---------------------------- 349
+AI + + M E VT IN+L A V
Sbjct: 232 LQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAY 291
Query: 350 -RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
R G + + ++ S S+ +++S Y++ + A+ F + + +K D L
Sbjct: 292 SRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALV 351
Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
IL C ++ G +H ++K+ V +GLI +YSK E +F ++ E
Sbjct: 352 GILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQET 411
Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMR-QNEMYPTQFSFATVLSSCAKLSSSFQGRQV 527
++ WNS+I+G + AF F QM + P + A++L+ C++L G+++
Sbjct: 412 PLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKEL 471
Query: 528 HAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYG 587
H ++ + N+ FV +ALI+MY KCG+ A F + T TWN MI GY+ +G
Sbjct: 472 HGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQ 531
Query: 588 DEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTC 647
A+ Y +M G+KPD+ITF+ +L+AC+H G VD G F +M + G+ P L HY
Sbjct: 532 HRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYAL 591
Query: 648 MIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKN 707
M+ LGRA F EA LI +M K D +W LLS+C +H + + + A ++F LD KN
Sbjct: 592 MVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKN 651
Query: 708 SAPYSLLANIYSSLGRWDDLRAVRELMSEN 737
Y L++N+Y++ WDD+ VR +M +N
Sbjct: 652 GGLYVLMSNLYATEAMWDDVVRVRNMMKDN 681
Score = 215 bits (548), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 147/544 (27%), Positives = 253/544 (46%), Gaps = 64/544 (11%)
Query: 14 ILRNGLFDDTFLCNRLIELYSKCNNTHSAQ------HLFDKMPHKDIYSWNAILSAQCKS 67
+LR+ L + F + ++ + N+ Q HL + +Y ++L+ K
Sbjct: 39 LLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKK 98
Query: 68 DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
+ A LFDEMPER+ V WN LI RNG E A ++ M +GF P+ TL ++
Sbjct: 99 GCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLL 158
Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
V GR HG+ K GL+ + V NAL+S Y+KC A +F EM + + V
Sbjct: 159 PFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTV 218
Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
++ M+ +++ EA+ +F+ M K V I V++ ++L
Sbjct: 219 SWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL------------------- 259
Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
S +V + +HCL +K G D+ + SL+ Y++ G + SAE ++++ + S+V
Sbjct: 260 ---SAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLT 316
Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC----------------VRS 351
+++ Y +K A+ + + + D V + +L C ++S
Sbjct: 317 SIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKS 376
Query: 352 G-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
G D++T +F+ + + SWN+++S QS A ++F
Sbjct: 377 GLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVF 436
Query: 393 REMQFR-GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
+M G+ PD T+A +L+ C+ + L GK++H +L+ +N+V + LI +Y+K
Sbjct: 437 HQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAK 496
Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
C AE VF I WNSMI+G SL+ L A + +MR+ + P + +F V
Sbjct: 497 CGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGV 556
Query: 512 LSSC 515
LS+C
Sbjct: 557 LSAC 560
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 220/490 (44%), Gaps = 89/490 (18%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ +H ++GL D+ + N LI YSKC SA+ LF +M K SWN ++ A +
Sbjct: 170 GRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQ 229
Query: 67 SDDLEFAYKLFDEMPERNV----VSWNNLISALV-------------------------- 96
S E A +F M E+NV V+ NL+SA V
Sbjct: 230 SGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVC 289
Query: 97 ---RNGLEEKALSVYNKMSNEGFVP-THIT----------LASVFKAST----------A 132
R G A +Y + V T I +A V+ + T A
Sbjct: 290 AYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVA 349
Query: 133 LLDVEHGRR----------CHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
L+ + HG + HG IK GL V N L+++Y+K + + +FE++
Sbjct: 350 LVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ 409
Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMF-RLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
E +++ +++SG ++ R A E+F ++M+ + D+++++S+L C++ C
Sbjct: 410 ETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC----- 464
Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
N+ G+++H T++ FE + + +L+DMYAK G+ AE +F ++
Sbjct: 465 ----------LNL-GKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAP 513
Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
+WN MI+GY +A+ M+ G +PDE+T + +L AC G + G+ F
Sbjct: 514 CTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICF 573
Query: 362 DSM-----PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
+M SP++ + M+ ++ EA+ L +M +KPD +LS+C
Sbjct: 574 RAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMD---IKPDSAVWGALLSACII 630
Query: 417 MGILESGKQV 426
LE G+ V
Sbjct: 631 HRELEVGEYV 640
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 31/236 (13%)
Query: 1 KKAHV-AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNA 59
K +H+ G LH + +++GL T + N LI +YSK ++ + LF+++ + SWN+
Sbjct: 359 KSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNS 418
Query: 60 ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
++S +S A+++F +M M G +P
Sbjct: 419 VISGCVQSGRASTAFEVFHQM------------------------------MLTGGLLPD 448
Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFE 179
IT+AS+ + L + G+ HG ++ + +V AL+ +YAKCG A VF+
Sbjct: 449 AITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFK 508
Query: 180 EMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
+ P T+ +M+SG + + AL + M K + D ++ VL C G
Sbjct: 509 SIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGG 564
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 337 bits (865), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/614 (30%), Positives = 332/614 (54%), Gaps = 65/614 (10%)
Query: 174 AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVS----LSSVLG 229
A+ +F+EM++ + + M+ G +EA++ + M+ V D+ + + SV G
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 230 VCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMD 289
+ + E G+++H + IKLGF +D+++ NSL+ +Y K G
Sbjct: 143 ISSLE--------------------EGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 290 SAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC- 348
AE +F +PER +VSWN MI+GY ++ L + M CGF+PD ++++ L AC
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 349 ---------------VRS--------------------GDIKTGREMFDSMPSPSVSSWN 373
VRS G++ +F+ M ++ +WN
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 374 AMLSSYSQSENHKEAIKLFREM-QFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
M+ Y+++ +A F++M + G++PD T +L + A ILE G+ +H +++
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA---ILE-GRTIHGYAMR 358
Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMF 492
+ + LI +Y +C + + AE +F R+ E +++ WNS+IA N + A
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
F+++ + + P + A++L + A+ S +GR++HA I K Y ++ + ++L+ MY
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478
Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
CGD+ AR+ F+ + K+ V+WN +I YA +G+G +V L+ +MIAS V P+ TF ++
Sbjct: 479 CGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASL 538
Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
L ACS SG+VD G E F SM+ ++G++P ++HY CM+D +GR G+F A+ ++EMP
Sbjct: 539 LAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVP 598
Query: 673 DPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRE 732
IW LL++ R H ++ +A+ AAE++F+++ N+ Y LL N+Y+ GRW+D+ ++
Sbjct: 599 TARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKL 658
Query: 733 LMSENCIVKDPAYS 746
LM I + + S
Sbjct: 659 LMESKGISRTSSRS 672
Score = 232 bits (592), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 149/531 (28%), Positives = 267/531 (50%), Gaps = 50/531 (9%)
Query: 70 LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
+E A +LFDEM + + WN +I GL +A+ Y++M G T V K+
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
+ +E G++ H +VIK+G ++YV N+L+SLY K G A VFEEM E + V++
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
+M+SG +L +F+ M++ D S S LG C S V++
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC--------SHVYSPK--- 248
Query: 250 FSRNVHGQQVHCLTIKLGFE-ADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
G+++HC ++ E D+ + S+LDMY+K G++ AE IF+ + +R++V+WNV
Sbjct: 249 -----MGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303
Query: 309 MIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACV------------------ 349
MI Y + + T A Q+M + G +PD +TSIN+L A
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLP 363
Query: 350 -------------RSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
G +K+ +FD M +V SWN+++++Y Q+ + A++LF+E+
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
+ PD TT+A IL + A L G+++HA +K+ + + + L+ +Y+ C E
Sbjct: 424 DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLE 483
Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
A + F+ I D+V WNS+I +++ + F +M + + P + +FA++L++C+
Sbjct: 484 DARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACS 543
Query: 517 KLSSSFQGRQVHAQIEKD-GYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
+G + ++++ G I ++++ + G+ A++F + M
Sbjct: 544 ISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 211/469 (44%), Gaps = 89/469 (18%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +HA +++ G D ++CN LI LY K C
Sbjct: 149 GKKIHAMVIKLGFVSDVYVCNSLISLYMKLG---------------------------CA 181
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
D A K+F+EMPER++VSWN++IS + G +L ++ +M GF P + S
Sbjct: 182 WD----AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSA 237
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDK-NIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
A + + + G+ H ++ ++ ++ V ++L +Y+K G +A +F M + N
Sbjct: 238 LGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRN 297
Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
V + M+ A+ RV +A F+ M E G++ DV
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKM--------------------SEQNGLQPDVITS 337
Query: 246 SD-NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
+ S + G+ +H ++ GF + L +L+DMY + G + SAEVIF + E++V+
Sbjct: 338 INLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVI 397
Query: 305 SWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS------------- 351
SWN +IA Y Q ++ A+EL Q + PD T ++L A S
Sbjct: 398 SWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI 457
Query: 352 ----------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAI 389
GD++ R+ F+ + V SWN+++ +Y+ + ++
Sbjct: 458 VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISV 517
Query: 390 KLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHID 438
LF EM V P+++T A +L++C+ G+++ G + + S+K ID
Sbjct: 518 WLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE-YFESMKREYGID 565
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 218/477 (45%), Gaps = 47/477 (9%)
Query: 279 LDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDE 338
L +A + M+ A +F + + WNVMI G+ +A++ RM G + D
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 339 VTSINMLVACVRSGDIKTGREM-----------------------------------FDS 363
T ++ + ++ G+++ F+
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
MP + SWN+M+S Y + ++ LF+EM G KPDR + L +C+ + + G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 424 KQVHAASLKTASHI-DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSL 482
K++H ++++ D V + ++ +YSK AER+F+ + + +IV WN MI +
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 483 NSLDIEAFMFFKQM-RQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIF 541
N +AF+ F++M QN + P + +L + A L +GR +H + G++ +
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMV 366
Query: 542 VGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASG 601
+ +ALI+MY +CG + A FD M KN ++WN +I Y QNG A+ L++++ S
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 602 VKPDDITFVAILTACSHSGLVDVGVEIFNSM-QLDHGVEPILDHYTCMIDCLGRAGHFHE 660
+ PD T +IL A + S + G EI + + + I+ ++ G +
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII--LNSLVHMYAMCGDLED 484
Query: 661 AEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF--RLDPKNSAPYSLLA 715
A + + K D V W ++ + +H R++ E+ R++P S SLLA
Sbjct: 485 ARKCFNHILLK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 540
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 182/397 (45%), Gaps = 56/397 (14%)
Query: 7 GKLLHAHILRNGL-FDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
GK +H H +R+ + D + ++++YSK A+ +F+ M ++I +WN ++
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309
Query: 66 KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
++ + A+ F +M E+N G P IT +
Sbjct: 310 RNGRVTDAFLCFQKMSEQN------------------------------GLQPDVITSIN 339
Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
+ AS L GR HG ++ G ++ + AL+ +Y +CG K A +F+ M+E N
Sbjct: 340 LLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKN 395
Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
+++ ++++ + + ALE+F+ + ++ DS +++S+L A ES ++
Sbjct: 396 VISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA------ESLSLSE 449
Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
G+++H +K + ++ + NSL+ MYA GD++ A F+++ + VVS
Sbjct: 450 ----------GREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499
Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP 365
WN +I Y ++ L M + P++ T ++L AC SG + G E F+SM
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
Query: 366 -----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
P + + ML ++ N A + EM F
Sbjct: 560 REYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPF 596
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 136/269 (50%), Gaps = 11/269 (4%)
Query: 418 GILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMI 477
GI + + V K +++ + + ++ + E A ++F + + D WN MI
Sbjct: 43 GISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMI 102
Query: 478 AGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYV 537
G + L IEA F+ +M + F++ V+ S A +SS +G+++HA + K G+V
Sbjct: 103 KGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFV 162
Query: 538 NDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM 597
+D++V ++LI +Y K G + A + F+ M ++ V+WN MI GY G G ++ L+K+M
Sbjct: 163 SDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEM 222
Query: 598 IASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH-----YTCMIDCL 652
+ G KPD + ++ L ACSH +G EI H V ++ T ++D
Sbjct: 223 LKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC-----HAVRSRIETGDVMVMTSILDMY 277
Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLL 681
+ G AE + + M + + V W V++
Sbjct: 278 SKYGEVSYAERIFNGM-IQRNIVAWNVMI 305
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 46/297 (15%)
Query: 3 AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
A + G+ +H + +R G L LI++Y +C SA+ +FD+M
Sbjct: 345 AILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA------------ 392
Query: 63 AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
E+NV+SWN++I+A V+NG AL ++ ++ + VP T
Sbjct: 393 -------------------EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
+AS+ A L + GR H ++K N + N+L+ +YA CG + A F +
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
+ V++ +++ A ++ +F MI V+ + + +S+L C+ G E
Sbjct: 494 LKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553
Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP 299
+ +S + + G + + +LD+ + G+ +A+ +P
Sbjct: 554 YFESMKR---------------EYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 337 bits (865), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/594 (31%), Positives = 311/594 (52%), Gaps = 53/594 (8%)
Query: 154 NIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI 213
N++ N LL Y+K G FE++ + + VT+ ++ G + + V A++ + M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 214 RK-AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADL 272
R + ++ V+L ++L + + G G+Q+H IKLGFE+ L
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNG----------------HVSLGKQIHGQVIKLGFESYL 174
Query: 273 HLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSC 332
+ + LL MYA G + A+ +F L +R+ V +N ++ G
Sbjct: 175 LVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG-------------------- 214
Query: 333 GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
L+AC G I+ ++F M SVS W AM+ +Q+ KEAI+ F
Sbjct: 215 ------------LLAC---GMIEDALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEAIECF 258
Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
REM+ +G+K D+ +L +C +G + GKQ+HA ++T YV S LI +Y KC
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
+ A+ VF R+ + ++V W +M+ G EA F M+++ + P ++ +
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 513 SSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTV 572
S+CA +SS +G Q H + G ++ + V ++L+ +Y KCGDI + + F+ M+ ++ V
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438
Query: 573 TWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSM 632
+W M+ YAQ G E ++L+ M+ G+KPD +T +++ACS +GLV+ G F M
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Query: 633 QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRL 692
++G+ P + HY+CMID R+G EA I+ MP D + W LLS+CR N+ +
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEI 558
Query: 693 AKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
K AAE L LDP + A Y+LL++IY+S G+WD + +R M E + K+P S
Sbjct: 559 GKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQS 612
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/580 (26%), Positives = 283/580 (48%), Gaps = 68/580 (11%)
Query: 8 KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
K++H +I+R + +TFL N ++ Y+ ++ A+ +FD++P +++SWN +L A K+
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 68 DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVP-THITLASV 126
+ F+++P+R+ V+WN LI +GL A+ YN M + T +TL ++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
K S++ V G++ HG VIK+G + + V + LL +YA G A VF + + N
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG-------CGVE 239
V + ++M GL + +AL++FR M + DSVS ++++ A+ G C E
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 240 SDVFAQSDNKFSRNV------------HGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
V +++ G+Q+H I+ F+ +++ ++L+DMY K
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
+ A+ +F + +++VVSW M+ GYGQ ++ +A+++ M+ G +PD T + A
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 348 CV-----------------------------------RSGDIKTGREMFDSMPSPSVSSW 372
C + GDI +F+ M SW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGK---QVHAA 429
AM+S+Y+Q E I+LF +M G+KPD TL ++S+C+ G++E G+ ++ +
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 430 SLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGL-SLNSLDI 487
I +Y S +I ++S+ R E A R + +P D + W ++++ + +L+I
Sbjct: 501 EYGIVPSIGHY--SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEI 558
Query: 488 EAFMFFKQMRQNEMYPTQFS-FATVLSSCAKLSSSFQGRQ 526
+ + + +P ++ +++ +S K S Q R+
Sbjct: 559 GKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRR 598
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 209/428 (48%), Gaps = 26/428 (6%)
Query: 3 AHVA-GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAIL 61
HV+ GK +H +++ G + + L+ +Y+ A+ +F + ++ +N+++
Sbjct: 153 GHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLM 212
Query: 62 SAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
+E A +LF M E++ VSW +I L +NGL ++A+ + +M +G
Sbjct: 213 GGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 271
Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
SV A L + G++ H +I+ +IYV +AL+ +Y KC +A VF+ M
Sbjct: 272 PFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM 331
Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
+ N V++TAM+ G +T R EA+++F M R + D +L + CA
Sbjct: 332 KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA--------- 382
Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
S G Q H I G + +SNSL+ +Y K GD+D + +F+ + R
Sbjct: 383 -------NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
VSW M++ Y Q ++ + I+L +M G +PD VT ++ AC R+G ++ G+ F
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495
Query: 362 DSMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAA 416
M S PS+ ++ M+ +S+S +EA++ M F PD +LS+C
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPF---PPDAIGWTTLLSACRN 552
Query: 417 MGILESGK 424
G LE GK
Sbjct: 553 KGNLEIGK 560
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 212/472 (44%), Gaps = 75/472 (15%)
Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
A++ +++ + +HG + L F L N+++ YA A +F +P+ ++
Sbjct: 18 ARNQSRYVKMIHGNIIRALPYPETF-----LYNNIVHAYALMKSSTYARRVFDRIPQPNL 72
Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDS 363
SWN N+L+A ++G I F+
Sbjct: 73 FSWN-----------------------------------NLLLAYSKAGLISEMESTFEK 97
Query: 364 MPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD--RTTLAIILSSCAAMGILE 421
+P +WN ++ YS S A+K + M R + R TL +L ++ G +
Sbjct: 98 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFSANLTRVTLMTMLKLSSSNGHVS 156
Query: 422 SGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFH------------------ 463
GKQ+H +K V S L+ +Y+ A++VF+
Sbjct: 157 LGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLL 216
Query: 464 ------------RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
R E D V W +MI GL+ N L EA F++M+ + Q+ F +V
Sbjct: 217 ACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNT 571
L +C L + +G+Q+HA I + + + I+VGSALI+MYCKC ++ A+ FD M KN
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 572 VTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNS 631
V+W M+ GY Q G +EAV+++ DM SG+ PD T ++AC++ ++ G + F+
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ-FHG 395
Query: 632 MQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
+ G+ + ++ G+ G ++ L +EM + D V W ++S+
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 213/693 (30%), Positives = 344/693 (49%), Gaps = 105/693 (15%)
Query: 118 PTHITLASVFKASTALL----DVEHGR----RCHGLVIKIGLDKNIYVANALLSLYAKCG 169
P ++L+++ + T LL + +GR H VIK GL ++Y+ N L+++Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 170 WTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSS--- 226
+ HA +F+EM ++ ++S +K + E F + ++ DSVS ++
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR----DSVSWTTMIV 119
Query: 227 -------------VLGVCAREGCGVESDVFAQSDNKFSRNVH-----GQQVHCLTIKLGF 268
V+G +EG +E F ++ S G++VH +KLG
Sbjct: 120 GYKNIGQYHKAIRVMGDMVKEG--IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGL 177
Query: 269 EADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQR 328
++ +SNSLL+MYAK GD A+ +F + R + SWN MIA + Q
Sbjct: 178 RGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQ------------- 224
Query: 329 MKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
G + F+ M + +WN+M+S ++Q A
Sbjct: 225 ----------------------VGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 389 IKLFREMQFRGV-KPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
+ +F +M + PDR TLA +LS+CA + L GKQ+H+ + T I V + LI
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 448 IYSKCQRNELAER---------------------------------VFHRIPELDIVCWN 474
+YS+C E A R +F + + D+V W
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 475 SMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKD 534
+MI G + EA F+ M P ++ A +LS + L+S G+Q+H K
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 535 GYVNDIFVGSALIEMYCKCGDIYGARQFFDMMH-GKNTVTWNEMIHGYAQNGYGDEAVRL 593
G + + V +ALI MY K G+I A + FD++ ++TV+W MI AQ+G+ +EA+ L
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 594 YKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLG 653
++ M+ G++PD IT+V + +AC+H+GLV+ G + F+ M+ + P L HY CM+D G
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 654 RAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSL 713
RAG EA+ I++MP + D V W LLS+CR+H N+ L K AAE L L+P+NS YS
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 714 LANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
LAN+YS+ G+W++ +R+ M + + K+ +S
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 154/563 (27%), Positives = 265/563 (47%), Gaps = 91/563 (16%)
Query: 6 AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
+L+H ++++GL +L N L+ +YSK A+ LFD+MP + +SWN +LSA
Sbjct: 32 TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91
Query: 66 KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
K D++ + FD++P+R+ VSW +I G KA+ V M EG PT TL +
Sbjct: 92 KRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCG---------------- 169
V + A +E G++ H ++K+GL N+ V+N+LL++YAKCG
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 170 ---WTKH------------AVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIR 214
W A+ FE+M+E + VT+ +M+SG + + AL++F M+R
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 215 KA-VSIDSVSLSSVLGVCAR----------------EGCGVESDVFAQSDNKFSRNVHGQ 257
+ +S D +L+SVL CA G + V + +SR +
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 258 QVHCLTIKLGFEADLHLS--NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
L + G + DL + +LLD Y K GDM+ A+ IF +L +R VV+W MI GY Q
Sbjct: 332 TARRLIEQRGTK-DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 316 KYQSTKAIELLQRMKSCGFEPD-------------------------------EVTSINM 344
+AI L + M G P+ E+ S+++
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 450
Query: 345 LVACV----RSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRG 399
A + ++G+I + FD + SW +M+ + +Q + +EA++LF M G
Sbjct: 451 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510
Query: 400 VKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGIYSKCQRNEL 457
++PD T + S+C G++ G+Q + +K I ++ + ++ ++ + +
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQ-YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 458 AERVFHRIP-ELDIVCWNSMIAG 479
A+ ++P E D+V W S+++
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSA 592
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 205/644 (31%), Positives = 334/644 (51%), Gaps = 56/644 (8%)
Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
H IK G +IYV+N +L Y K G+ +A +F+EM + + V++ M+SG ++
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCL 262
+A +F M R +D S S +L G+ S R G+QVH L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLK-------GIAS---------VKRFDLGEQVHGL 126
Query: 263 TIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKA 322
IK G+E ++++ +SL+DMYAK ++ A F + E + VSWN +IAG+ Q A
Sbjct: 127 VIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTA 186
Query: 323 IELLQRMK--------SCGFEP---------------------------DEVTSIN-MLV 346
LL M+ + F P E+T N M+
Sbjct: 187 FWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMIS 246
Query: 347 ACVRSGDIKTGREMFDSMP-SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
+ G + + +FD + S + SWN+M++ +S+ E + A +LF +MQ V+ D
Sbjct: 247 SYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIY 306
Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNEL--AERVFH 463
T +LS+C+ GK +H +K + LI +Y + + A +F
Sbjct: 307 TYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE 366
Query: 464 RIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQ 523
+ D++ WNS+I G + L +A FF +R +E+ ++F+ +L SC+ L++
Sbjct: 367 SLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQL 426
Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGK-NTVTWNEMIHGYA 582
G+Q+HA K G+V++ FV S+LI MY KCG I AR+ F + K +TV WN MI GYA
Sbjct: 427 GQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYA 486
Query: 583 QNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPIL 642
Q+G G ++ L+ M VK D +TF AILTACSH+GL+ G+E+ N M+ + ++P +
Sbjct: 487 QHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRM 546
Query: 643 DHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFR 702
+HY +D LGRAG ++A+ LI+ MP DP++ + L CR + +A + A L
Sbjct: 547 EHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLE 606
Query: 703 LDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
++P++ Y L+++YS L +W++ +V+++M E + K P +S
Sbjct: 607 IEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWS 650
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 166/636 (26%), Positives = 291/636 (45%), Gaps = 97/636 (15%)
Query: 53 DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
DIY N IL + K L +A LFDEMP+R+ VSWN +IS G E A ++ M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
G + + + K ++ + G + HGLVIK G + N+YV ++L+ +YAKC +
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLM-IRKAVSIDSVSLSSVLGVC 231
A F+E+SEPN V++ A+++G + + A + LM ++ AV++D+ + + +L +
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLL 213
Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
D F + +QVH +KLG + ++ + N+++ YA G + A
Sbjct: 214 --------------DDPMFCNLL--KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDA 257
Query: 292 EVIFSNL-PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVR 350
+ +F L + ++SWN MIAG+ + A EL +M+ E D T +L AC
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC-- 315
Query: 351 SGD-------------IKTGRE--------------------------MFDSMPSPSVSS 371
SG+ IK G E +F+S+ S + S
Sbjct: 316 SGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLIS 375
Query: 372 WNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL 431
WN++++ ++Q ++A+K F ++ +K D + +L SC+ + L+ G+Q+HA +
Sbjct: 376 WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALAT 435
Query: 432 KTASHIDNYVASGLIGIYSKCQRNELAERVFHRI-PELDIVCWNSMIAGLSLNSLDIEAF 490
K+ + +V S LI +YSKC E A + F +I + V WN+MI G + + L +
Sbjct: 436 KSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSL 495
Query: 491 MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMY 550
F QM + +F +L++C+ +G ++ +E ++ +E Y
Sbjct: 496 DLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEP------VYKIQPRMEHY 549
Query: 551 CKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFV 610
D+ G + G ++A L + M + PD +
Sbjct: 550 AAAVDLLG------------------------RAGLVNKAKELIESM---PLNPDPMVLK 582
Query: 611 AILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYT 646
L C G +++ ++ N + +EP DH+T
Sbjct: 583 TFLGVCRACGEIEMATQVANHLL---EIEP-EDHFT 614
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 201/463 (43%), Gaps = 93/463 (20%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ +H +++ G + ++ + L+++Y+KC A F ++ + SWNA+++ +
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
D++ A+ L M + V+ + A
Sbjct: 180 VRDIKTAFWLLGLMEMKAAVTMD----------------------------------AGT 205
Query: 127 FKASTALLD----VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
F LLD ++ H V+K+GL I + NA++S YA CG A VF+ +
Sbjct: 206 FAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLG 265
Query: 183 EPNE-VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
+ +++ +M++G +K + A E+F M R V D + + +L C+ G E
Sbjct: 266 GSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS----GEEHQ 321
Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAK--NGDMDSAEVIFSNLP 299
+F G+ +H + IK G E +N+L+ MY + G M+ A +F +L
Sbjct: 322 IF------------GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK 369
Query: 300 ERSVVSWNVMIAGYGQKYQSTKAIELLQRMKS---------------------------- 331
+ ++SWN +I G+ QK S A++ ++S
Sbjct: 370 SKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ 429
Query: 332 -------CGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSP-SVSSWNAMLSSYSQSE 383
GF +E +++V + G I++ R+ F + S S +WNAM+ Y+Q
Sbjct: 430 IHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
+ ++ LF +M + VK D T IL++C+ G+++ G ++
Sbjct: 490 LGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 6/277 (2%)
Query: 426 VHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSL 485
H ++K S D YV++ ++ Y K A +F +P+ D V WN+MI+G +
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 486 DIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSA 545
+A+ F M+++ +SF+ +L A + G QVH + K GY +++VGS+
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 546 LIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDM-IASGVKP 604
L++MY KC + A + F + N+V+WN +I G+ Q A L M + + V
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 605 DDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEML 664
D TF +LT ++ ++ ++ L G++ + MI G +A+ +
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQV-HAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 665 IDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELF 701
D + D + W +++ H K +A ELF
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHE----LKESAFELF 293
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 332 bits (852), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 218/697 (31%), Positives = 356/697 (51%), Gaps = 56/697 (8%)
Query: 53 DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
D+Y A++ CK+ DL A ++FD+M ++VV+WN ++S L +NG AL +++ M
Sbjct: 134 DVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMR 193
Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYV-ANALLSLYAKCGWT 171
+ H++L ++ A + L + R HGLVIK G I+ ++ L+ +Y C
Sbjct: 194 SCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADL 250
Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
A VFEE+ +E ++ MM+ A E LE+F LM V ++ V+ +S L
Sbjct: 251 YAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAA 310
Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
A G D+ V G +H ++ G D+ ++ SL+ MY+K G+++ A
Sbjct: 311 AYVG-----DL-----------VKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIA 354
Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-- 349
E +F N+ +R VVSW+ MIA Y Q Q +AI L + M +P+ VT ++L C
Sbjct: 355 EQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGV 414
Query: 350 ---RSG----------DI---------------KTGR-----EMFDSMPSPSVSSWNAML 376
R G DI K GR + F+ +P ++NA+
Sbjct: 415 AASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALA 474
Query: 377 SSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASH 436
Y+Q + +A +++ M+ GV PD T+ +L +CA G V+ +K
Sbjct: 475 QGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFD 534
Query: 437 IDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
+ +VA LI +++KC A +F + E V WN M+ G L+ EA F+Q
Sbjct: 535 SECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQ 594
Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
M+ + P +F ++ + A+LS+ G VH+ + + G+ + VG++L++MY KCG
Sbjct: 595 MKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGM 654
Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTA 615
I + + F + K V+WN M+ YA +G AV L+ M + +KPD ++F+++L+A
Sbjct: 655 IESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSA 714
Query: 616 CSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
C H+GLV+ G IF M H +E ++HY CM+D LG+AG F EA ++ M K
Sbjct: 715 CRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVG 774
Query: 676 IWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYS 712
+W LL+S R+H N+ L+ A +L +L+P N + YS
Sbjct: 775 VWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYS 811
Score = 256 bits (654), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 187/697 (26%), Positives = 319/697 (45%), Gaps = 57/697 (8%)
Query: 29 LIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSW 88
L+ + +C N + + + N +++A + + +FD + + VV W
Sbjct: 8 LLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLW 67
Query: 89 NNLISALVRNGLEEKALSVYNKMSNE-GFVPTHITLASVFKASTALLDVEHGRRCHGLVI 147
N++I R GL +AL + MS E G P + KA +D + G R H L+
Sbjct: 68 NSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIA 127
Query: 148 KIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALE 207
++GL+ ++Y+ AL+ +Y K A VF++M + VT+ M+SGLA+ AL
Sbjct: 128 EMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALL 187
Query: 208 MFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLG 267
+F M V ID VSL +++ ++ +SD R +HG L IK G
Sbjct: 188 LFHDMRSCCVDIDHVSLYNLIPAVSK---------LEKSD--VCRCLHG-----LVIKKG 231
Query: 268 FEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQ 327
F S+ L+DMY D+ +AE +F + + SW M+A Y + +EL
Sbjct: 232 F--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289
Query: 328 RMKSC-----------------------------------GFEPDEVTSINMLVACVRSG 352
M++ G D + +++ + G
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCG 349
Query: 353 DIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILS 412
+++ ++F ++ V SW+AM++SY Q+ H EAI LFR+M +KP+ TL +L
Sbjct: 350 ELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQ 409
Query: 413 SCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVC 472
CA + GK +H ++K + A+ +I +Y+KC R A + F R+P D V
Sbjct: 410 GCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVA 469
Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
+N++ G + +AF +K M+ + + P + +L +CA S +G V+ QI
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII 529
Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM-HGKNTVTWNEMIHGYAQNGYGDEAV 591
K G+ ++ V ALI M+ KC + A FD K+TV+WN M++GY +G +EAV
Sbjct: 530 KHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAV 589
Query: 592 RLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDC 651
++ M +P+ +TFV I+ A + + VG+ + +S+ + G ++D
Sbjct: 590 ATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSL-IQCGFCSQTPVGNSLVDM 648
Query: 652 LGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHA 688
+ G +E E+ K V W +LS+ H
Sbjct: 649 YAKCGMIESSEKCFIEISNK-YIVSWNTMLSAYAAHG 684
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 152/585 (25%), Positives = 268/585 (45%), Gaps = 55/585 (9%)
Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
HG +I GL + + NA SL+ + ++ +F+ + +P V + +M+ G +
Sbjct: 25 HGSLIVSGLKPHNQLINAY-SLFQRQDLSR---VIFDSVRDPGVVLWNSMIRGYTRAGLH 80
Query: 203 VEALEMFRLMIR-KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHC 261
EAL F M K + D S + L CA D K G ++H
Sbjct: 81 REALGFFGYMSEEKGIDPDKYSFTFALKACA-----------GSMDFK-----KGLRIHD 124
Query: 262 LTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTK 321
L ++G E+D+++ +L++MY K D+ SA +F + + VV+WN M++G Q S+
Sbjct: 125 LIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA 184
Query: 322 AIELLQRMKSCGFEPDEVTSINMLVA-----------CVRSGDIKTG------------- 357
A+ L M+SC + D V+ N++ A C+ IK G
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMY 244
Query: 358 ---------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLA 408
+F+ + SSW M+++Y+ + +E ++LF M+ V+ ++ A
Sbjct: 245 CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAA 304
Query: 409 IILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL 468
L + A +G L G +H +++ D VA+ L+ +YSKC E+AE++F I +
Sbjct: 305 SALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDR 364
Query: 469 DIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVH 528
D+V W++MIA EA F+ M + + P + +VL CA +++S G+ +H
Sbjct: 365 DVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIH 424
Query: 529 AQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGD 588
K +++ +A+I MY KCG A + F+ + K+ V +N + GY Q G +
Sbjct: 425 CYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDAN 484
Query: 589 EAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCM 648
+A +YK+M GV PD T V +L C+ G ++ + + HG + +
Sbjct: 485 KAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQI-IKHGFDSECHVAHAL 543
Query: 649 IDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLA 693
I+ + A +L D+ + V W ++++ LH A
Sbjct: 544 INMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEA 588
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 206/458 (44%), Gaps = 83/458 (18%)
Query: 5 VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
V G +H + ++ GL D + L+ +YSKC A+ LF + +D+ SW+A
Sbjct: 317 VKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSA----- 371
Query: 65 CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
+I++ + G ++A+S++ M P +TL
Sbjct: 372 --------------------------MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLT 405
Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
SV + + G+ H IK ++ + A A++S+YAKCG A+ FE +
Sbjct: 406 SVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
+ V F A+ G + +A ++++ M V DS ++ +L CA F
Sbjct: 466 DAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA----------FC 515
Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSV 303
SD V+GQ IK GF+++ H++++L++M+ K + +A V+F E+S
Sbjct: 516 -SDYARGSCVYGQ-----IIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKST 569
Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM------------------- 344
VSWN+M+ GY Q+ +A+ ++MK F+P+ VT +N+
Sbjct: 570 VSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSS 629
Query: 345 LVAC----------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEA 388
L+ C + G I++ + F + + + SWN MLS+Y+ A
Sbjct: 630 LIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCA 689
Query: 389 IKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
+ LF MQ +KPD + +LS+C G++E GK++
Sbjct: 690 VSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 140/280 (50%), Gaps = 12/280 (4%)
Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
T L ++L C L QVH + + + N LI YS QR +L+ +F
Sbjct: 6 TNLLLMLRECKNFRCL---LQVHGSLIVSGLKPHNQ----LINAYSLFQRQDLSRVIFDS 58
Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE-MYPTQFSFATVLSSCAKLSSSFQ 523
+ + +V WNSMI G + L EA FF M + + + P ++SF L +CA +
Sbjct: 59 VRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKK 118
Query: 524 GRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQ 583
G ++H I + G +D+++G+AL+EMYCK D+ ARQ FD MH K+ VTWN M+ G AQ
Sbjct: 119 GLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQ 178
Query: 584 NGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILD 643
NG A+ L+ DM + V D ++ ++ A S DV + + + G I
Sbjct: 179 NGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDV-CRCLHGLVIKKGF--IFA 235
Query: 644 HYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSS 683
+ +ID + AE + +E+ KD+ W ++++
Sbjct: 236 FSSGLIDMYCNCADLYAAESVFEEVWRKDESS-WGTMMAA 274
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 332 bits (851), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 196/642 (30%), Positives = 329/642 (51%), Gaps = 54/642 (8%)
Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV-TFTAMMSGLAKTDR 201
H ++ +GL +++ + +L+++Y C A VFE ++V + ++MSG +K
Sbjct: 27 HQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSM 86
Query: 202 VVEALEMFRLMIRKAVSI-DSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVH 260
+ LE+F+ ++ ++ + DS + +V+ ++ R G+ +H
Sbjct: 87 FHDTLEVFKRLLNCSICVPDSFTFPNVI----------------KAYGALGREFLGRMIH 130
Query: 261 CLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQST 320
L +K G+ D+ +++SL+ MYAK +++ +F +PER V SWN +I+ + Q ++
Sbjct: 131 TLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAE 190
Query: 321 KAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTG----------------------- 357
KA+EL RM+S GFEP+ V+ + AC R ++ G
Sbjct: 191 KALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALV 250
Query: 358 ------------REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRT 405
RE+F MP S+ +WN+M+ Y + K +++ M G +P +T
Sbjct: 251 DMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQT 310
Query: 406 TLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRI 465
TL IL +C+ L GK +H +++ + D YV LI +Y KC LAE VF +
Sbjct: 311 TLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT 370
Query: 466 PELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGR 525
+ WN MI+ +A + QM + P +F +VL +C++L++ +G+
Sbjct: 371 QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGK 430
Query: 526 QVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNG 585
Q+H I + D + SAL++MY KCG+ A + F+ + K+ V+W MI Y +G
Sbjct: 431 QIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHG 490
Query: 586 YGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHY 645
EA+ + +M G+KPD +T +A+L+AC H+GL+D G++ F+ M+ +G+EPI++HY
Sbjct: 491 QPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHY 550
Query: 646 TCMIDCLGRAGHFHEAEMLIDEMP-CKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
+CMID LGRAG EA +I + P D+ + L S+C LH L R A L
Sbjct: 551 SCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENY 610
Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
P +++ Y +L N+Y+S WD R VR M E + K P S
Sbjct: 611 PDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCS 652
Score = 236 bits (601), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 166/587 (28%), Positives = 267/587 (45%), Gaps = 88/587 (14%)
Query: 8 KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
KL+H IL GL D LC LI +Y C + SA+H+F+ DI S
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF---DIRS----------- 69
Query: 68 DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF-VPTHITLASV 126
+V WN+L+S +N + L V+ ++ N VP T +V
Sbjct: 70 ----------------DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNV 113
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
KA AL GR H LV+K G ++ VA++L+ +YAK ++++ VF+EM E +
Sbjct: 114 IKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDV 173
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
++ ++S ++ +ALE+F M +SVSL+ + C+R
Sbjct: 174 ASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSR------------- 220
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
G+++H +K GFE D +++++L+DMY K ++ A +F +P +S+V+W
Sbjct: 221 ---LLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAW 277
Query: 307 NVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRS--------------- 351
N MI GY K S +E+L RM G P + T ++L+AC RS
Sbjct: 278 NSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR 337
Query: 352 --------------------GDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKL 391
G+ +F SWN M+SSY N +A+++
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 392 FREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSK 451
+ +M GVKPD T +L +C+ + LE GKQ+H + ++ D + S L+ +YSK
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
Query: 452 CQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATV 511
C + A R+F+ IP+ D+V W MI+ + EA F +M++ + P + V
Sbjct: 458 CGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAV 517
Query: 512 LSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYG 558
LS+C +G + +Q+ + I IE Y DI G
Sbjct: 518 LSACGHAGLIDEGLKFFSQMRSKYGIEPI------IEHYSCMIDILG 558
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 236/499 (47%), Gaps = 87/499 (17%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+++H ++++G D + + L+ +Y+K N LF
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFN-------LF-------------------- 158
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
E + ++FDEMPER+V SWN +IS ++G EKAL ++ +M + GF P ++L
Sbjct: 159 ----ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVA 214
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
A + LL +E G+ H +K G + + YV +AL+ +Y KC + A VF++M +
Sbjct: 215 ISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL 274
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
V + +M+ G +E+ MI + +L+S+L C+R
Sbjct: 275 VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR------------- 321
Query: 247 DNKFSRN-VHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
SRN +HG+ +H I+ AD++++ SL+D+Y K G+ + AE +FS + S
Sbjct: 322 ----SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES 377
Query: 306 WNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE------ 359
WNVMI+ Y KA+E+ +M S G +PD VT ++L AC + ++ G++
Sbjct: 378 WNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437
Query: 360 -----------------------------MFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
+F+S+P V SW M+S+Y +EA+
Sbjct: 438 ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVA--SGLIGI 448
F EMQ G+KPD TL +LS+C G+++ G + + +++ I+ + S +I I
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFF-SQMRSKYGIEPIIEHYSCMIDI 556
Query: 449 YSKCQRNELAERVFHRIPE 467
+ R A + + PE
Sbjct: 557 LGRAGRLLEAYEIIQQTPE 575
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 48/297 (16%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
GK +H +++R+ + D ++ LI+LY KC + A+ +F K KD+
Sbjct: 328 GKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAE---------- 376
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
SWN +IS+ + G KA+ VY++M + G P +T SV
Sbjct: 377 --------------------SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSV 416
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
A + L +E G++ H + + L+ + + +ALL +Y+KCG K A +F + + +
Sbjct: 417 LPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDV 476
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVES-DVFAQ 245
V++T M+S + EAL F M + + D V+L +VL C G E F+Q
Sbjct: 477 VSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ 536
Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
+K+ G E + + ++D+ + G + A I PE S
Sbjct: 537 MRSKY----------------GIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETS 577
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 510 TVLSSCAKLSSSFQG-RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHG 568
++L C + S + + VH +I G D+ + +LI +Y C D AR F+
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 569 KNTV-TWNEMIHGYAQNGYGDEAVRLYKDMIASGV-KPDDITFVAILTACSHSGLVDVGV 626
++ V WN ++ GY++N + + ++K ++ + PD TF ++ A G +G
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG- 126
Query: 627 EIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRL 686
+ +++ + G + + ++ + F + + DEMP + D W ++ SC
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVI-SCFY 184
Query: 687 HANVRLAKRAAEELFRLDPKNSAPYSL 713
+ A++A E R++ P S+
Sbjct: 185 QSGE--AEKALELFGRMESSGFEPNSV 209
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 328 bits (841), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 210/716 (29%), Positives = 350/716 (48%), Gaps = 69/716 (9%)
Query: 73 AYKLFDEMPERN-VVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTH---ITLASVFK 128
A+KLFD +RN S N+ IS +R +ALS++ + G+ H +TL K
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
A D++ G + HG G + V+NA++ +Y K G +A+ +FE + +P+ V+
Sbjct: 87 ACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
+ ++SG D AL M V D+ + S+ L C V S+ F
Sbjct: 145 WNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFC------VGSEGF----- 190
Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
+ G Q+ +K G E+DL + NS + MY+++G A +F + + ++SWN
Sbjct: 191 -----LLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNS 245
Query: 309 MIAGYGQKYQ-STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM------- 360
+++G Q+ +A+ + + M G E D V+ +++ C D+K R++
Sbjct: 246 LLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR 305
Query: 361 ----------------------------FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
F M +V SW M+SS N +A+ +F
Sbjct: 306 GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIF 360
Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
M+F GV P+ T ++++ ++ G ++H +KT + V + I +Y+K
Sbjct: 361 LNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF 420
Query: 453 QRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVL 512
+ E A++ F I +I+ WN+MI+G + N EA F M P +++F +VL
Sbjct: 421 EALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVL 479
Query: 513 SSCAKLS--SSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKN 570
++ A S QG++ HA + K G + V SAL++MY K G+I + + F+ M KN
Sbjct: 480 NAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKN 539
Query: 571 TVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFN 630
W +I Y+ +G + + L+ MI V PD +TF+++LTAC+ G+VD G EIFN
Sbjct: 540 QFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFN 599
Query: 631 SMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANV 690
M + +EP +HY+CM+D LGRAG EAE L+ E+P + + +L SCRLH NV
Sbjct: 600 MMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNV 659
Query: 691 RLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
++ + AE + P+ S Y + NIY+ WD +R+ M + + K+ +S
Sbjct: 660 KMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFS 715
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 247/499 (49%), Gaps = 65/499 (13%)
Query: 58 NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
NA++ K+ + A +F+ + + +VVSWN ++S N + AL+ +M + G V
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVV 171
Query: 118 PTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPV 177
T ++ G + V+K GL+ ++ V N+ +++Y++ G + A V
Sbjct: 172 FDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRV 231
Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRV-VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGC 236
F+EMS + +++ +++SGL++ EA+ +FR M+R+ V +D VS +SV+ C E
Sbjct: 232 FDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHE-- 289
Query: 237 GVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFS 296
+D K +R +HG L IK G+E+ L + N L+ Y+K G +++ + +F
Sbjct: 290 ---------TDLKLARQIHG-----LCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFH 335
Query: 297 NLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA--------- 347
+ ER+VVSW MI+ A+ + M+ G P+EVT + ++ A
Sbjct: 336 QMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKE 390
Query: 348 -------CVRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLSSYSQ 381
C+++G ++ ++ F+ + + SWNAM+S ++Q
Sbjct: 391 GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 450
Query: 382 SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCA-AMGI-LESGKQVHAASLKTASHIDN 439
+ EA+K+F + P+ T +L++ A A I ++ G++ HA LK +
Sbjct: 451 NGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCP 509
Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFM-FFKQMRQ 498
V+S L+ +Y+K + +E+VF+ + + + W S+I+ S + D E M F +M +
Sbjct: 510 VVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHG-DFETVMNLFHKMIK 568
Query: 499 NEMYPTQFSFATVLSSCAK 517
+ P +F +VL++C +
Sbjct: 569 ENVAPDLVTFLSVLTACNR 587
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 218/500 (43%), Gaps = 94/500 (18%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G L + +++ GL D + N I +YS+ + A+ +FD+M KD+ SWN++LS +
Sbjct: 193 GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
F +A+ ++ M EG H++ SV
Sbjct: 253 EGTFGF------------------------------EAVVIFRDMMREGVELDHVSFTSV 282
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
D++ R+ HGL IK G + + V N L+S Y+KCG + VF +MSE N
Sbjct: 283 ITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNV 342
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
V++T M+S + D +A+ +F M V + V+ +G+ C +
Sbjct: 343 VSWTTMIS--SNKD---DAVSIFLNMRFDGVYPNEVTF---VGLINAVKCNEQIK----- 389
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSW 306
G ++H L IK GF ++ + NS + +YAK ++ A+ F ++ R ++SW
Sbjct: 390 --------EGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISW 441
Query: 307 NVMIAGYGQKYQSTKAIEL-----------------------------LQRMKSC----- 332
N MI+G+ Q S +A+++ +++ + C
Sbjct: 442 NAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLL 501
Query: 333 --GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIK 390
G V S +L + G+I ++F+ M + W +++S+YS + + +
Sbjct: 502 KLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMN 561
Query: 391 LFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKT----ASHIDNYVASGLI 446
LF +M V PD T +L++C G+++ G ++ ++ SH ++Y S ++
Sbjct: 562 LFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSH-EHY--SCMV 618
Query: 447 GIYSKCQRNELAERVFHRIP 466
+ + R + AE + +P
Sbjct: 619 DMLGRAGRLKEAEELMSEVP 638
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 185/424 (43%), Gaps = 59/424 (13%)
Query: 8 KLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKS 67
+ +H ++ G + N L+ YSKC + + +F +M +++ SW ++S+
Sbjct: 296 RQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN--- 352
Query: 68 DDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVF 127
++ A+S++ M +G P +T +
Sbjct: 353 ---------------------------------KDDAVSIFLNMRFDGVYPNEVTFVGLI 379
Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
A ++ G + HGL IK G V N+ ++LYAK + A FE+++ +
Sbjct: 380 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREII 439
Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
++ AM+SG A+ EAL+MF L + + SVL A D+ +
Sbjct: 440 SWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEYTFGSVLNAIA-----FAEDISVK-- 491
Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
GQ+ H +KLG + +S++LLDMYAK G++D +E +F+ + +++ W
Sbjct: 492 -------QGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWT 544
Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMP-- 365
+I+ Y + L +M PD VT +++L AC R G + G E+F+ M
Sbjct: 545 SIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEV 604
Query: 366 ---SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILES 422
PS ++ M+ ++ KEA +L E+ P + L +L SC G ++
Sbjct: 605 YNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP---GGPGESMLQSMLGSCRLHGNVKM 661
Query: 423 GKQV 426
G +V
Sbjct: 662 GAKV 665
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 161/352 (45%), Gaps = 57/352 (16%)
Query: 58 NAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFV 117
N+ ++ K + LE A K F+++ R ++SWN +IS +NG +AL ++ + E +
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET-M 469
Query: 118 PTHITLASVFKASTALLD--VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV 175
P T SV A D V+ G+RCH ++K+GL+ V++ALL +YAK G +
Sbjct: 470 PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESE 529
Query: 176 PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
VF EMS+ N+ +T+++S + + +F MI++ V+ D V+ SVL C R+G
Sbjct: 530 KVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKG 589
Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKL-GFEADLHLSNSLLDMYAKNGDMDSAEVI 294
V+ G ++ + I++ E + ++DM + G + AE +
Sbjct: 590 M-VDK---------------GYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEEL 633
Query: 295 FSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDI 354
S +P G G+ +LQ +ML +C G++
Sbjct: 634 MSEVP-----------GGPGES--------MLQ---------------SMLGSCRLHGNV 659
Query: 355 KTG---REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPD 403
K G E+ M S+ M + Y++ E +A ++ + M+ + V +
Sbjct: 660 KMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKE 711
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 223/737 (30%), Positives = 363/737 (49%), Gaps = 68/737 (9%)
Query: 61 LSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT- 119
LS C+ + + A +LFD +P+ V WN +I + N L +AL Y++M
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105
Query: 120 -HITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAV--- 175
T +S KA +++ G+ H +I+ + + V N+L+++Y C
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 176 ---PVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
VF+ M N V + ++S KT R EA F +M+R V VS +V +
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFE--ADLHLSNSLLDMYAKNGDMDS 290
+++VF + L +KLG E DL + +S + MYA+ GD++S
Sbjct: 226 ISRSIKKANVF----------------YGLMLKLGDEYVKDLFVVSSAISMYAELGDIES 269
Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIEL-LQRMKSCGFEPDEVTSI------- 342
+ +F + ER++ WN MI Y Q ++IEL L+ + S DEVT +
Sbjct: 270 SRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVS 329
Query: 343 ----------------------------NMLVACVRSGDIKTGREMFDSMPSPSVSSWNA 374
+++V R G + +F SM V SWN
Sbjct: 330 ALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNT 389
Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
M+S++ Q+ E + L EMQ +G K D T+ +LS+ + + E GKQ HA ++
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHR--IPELDIVCWNSMIAGLSLNSLDIEAFMF 492
+ + S LI +YSK +++++F E D WNSMI+G + N + F+
Sbjct: 450 IQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLV 508
Query: 493 FKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCK 552
F++M + + P + A++L +C+++ S G+Q+H + ++FV SAL++MY K
Sbjct: 509 FRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSK 568
Query: 553 CGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
G I A F +N+VT+ MI GY Q+G G+ A+ L+ M SG+KPD ITFVA+
Sbjct: 569 AGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAV 628
Query: 613 LTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKD 672
L+ACS+SGL+D G++IF M+ + ++P +HY C+ D LGR G +EA + + +
Sbjct: 629 LSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEG 688
Query: 673 DPV-IWEVLLSSCRLHANVRLAKRAAEELFRLDP-KNSAPYS-LLANIYSSLGRWDDLRA 729
+ +W LL SC+LH + LA+ +E L + D KN + Y LL+N+Y+ +W +
Sbjct: 689 NIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDK 748
Query: 730 VRELMSENCIVKDPAYS 746
VR M E + K+ S
Sbjct: 749 VRRGMREKGLKKEVGRS 765
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/557 (23%), Positives = 252/557 (45%), Gaps = 94/557 (16%)
Query: 6 AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHS------AQHLFDKMPHKDIYSWNA 59
AGK +H H++R + N L+ +Y C N + +FD M K++ +WN
Sbjct: 125 AGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNT 184
Query: 60 ILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPT 119
LIS V+ G +A + M P+
Sbjct: 185 -------------------------------LISWYVKTGRNAEACRQFGIMMRMEVKPS 213
Query: 120 HITLASVFKASTALLDVEHGRRCHGLVIKIGLD--KNIYVANALLSLYAKCGWTKHAVPV 177
++ +VF A + ++ +GL++K+G + K+++V ++ +S+YA+ G + + V
Sbjct: 214 PVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRV 273
Query: 178 FEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMI--RKAVSIDSVSLSSVLGVCAREG 235
F+ E N + M+ + D +VE++E+F I ++ VS + L + V A +
Sbjct: 274 FDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQ 333
Query: 236 CGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIF 295
+ G+Q H K E + + NSL+ MY++ G + + +F
Sbjct: 334 VEL-----------------GRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVF 376
Query: 296 SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC------- 348
++ ER VVSWN MI+ + Q + + L+ M+ GF+ D +T +L A
Sbjct: 377 LSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKE 436
Query: 349 ---------------------------VRSGDIKTGREMFD--SMPSPSVSSWNAMLSSY 379
+SG I+ +++F+ ++WN+M+S Y
Sbjct: 437 IGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGY 496
Query: 380 SQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDN 439
+Q+ + ++ +FR+M + ++P+ T+A IL +C+ +G ++ GKQ+H S++ +
Sbjct: 497 TQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNV 556
Query: 440 YVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQN 499
+VAS L+ +YSK + AE +F + E + V + +MI G + + A F M+++
Sbjct: 557 FVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQES 616
Query: 500 EMYPTQFSFATVLSSCA 516
+ P +F VLS+C+
Sbjct: 617 GIKPDAITFVAVLSACS 633
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 186/363 (51%), Gaps = 56/363 (15%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ H + +N + N L+ +YS+C + H +
Sbjct: 337 GRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKS------------------------ 372
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
+ +F M ER+VVSWN +ISA V+NGL+++ L + +M +GF +IT+ ++
Sbjct: 373 -------FGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTAL 425
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLD---KNIYVANALLSLYAKCGWTKHAVPVFE--EM 181
A++ L + E G++ H +I+ G+ N Y L+ +Y+K G + + +FE
Sbjct: 426 LSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY----LIDMYSKSGLIRISQKLFEGSGY 481
Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
+E ++ T+ +M+SG + + +FR M+ + + ++V+++S+L C++ G D
Sbjct: 482 AERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG---SVD 538
Query: 242 VFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER 301
+ G+Q+H +I+ + ++ ++++L+DMY+K G + AE +FS ER
Sbjct: 539 L-------------GKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER 585
Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMF 361
+ V++ MI GYGQ +AI L M+ G +PD +T + +L AC SG I G ++F
Sbjct: 586 NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIF 645
Query: 362 DSM 364
+ M
Sbjct: 646 EEM 648
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 193/413 (46%), Gaps = 55/413 (13%)
Query: 52 KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVY-NK 110
KD++ ++ +S + D+E + ++FD ERN+ WN +I V+N +++ ++
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEA 308
Query: 111 MSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGW 170
+ ++ V +T A +AL VE GR+ HG V K + I + N+L+ +Y++CG
Sbjct: 309 IGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGS 368
Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
+ VF M E + V++ M+S + E L + M ++ ID ++++++L
Sbjct: 369 VHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL-- 426
Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
+ + N ++ + G+Q H I+ G + + +++ L+DMY+K+G +
Sbjct: 427 -------------SAASNLRNKEI-GKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRI 471
Query: 291 AEVIF--SNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC 348
++ +F S ER +WN MI+GY Q + K + ++M P+ VT ++L AC
Sbjct: 472 SQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPAC 531
Query: 349 -----------------------------------VRSGDIKTGREMFDSMPSPSVSSWN 373
++G IK +MF + ++
Sbjct: 532 SQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYT 591
Query: 374 AMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQV 426
M+ Y Q + AI LF MQ G+KPD T +LS+C+ G+++ G ++
Sbjct: 592 TMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI 644
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 194/454 (42%), Gaps = 51/454 (11%)
Query: 277 SLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCG--F 334
S L ++G+ A +F +P+ + V WN +I G+ +A+ RMK
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103
Query: 335 EPDEVTSINMLVACVRSGDIKTG------------------------------------- 357
D T + L AC + ++K G
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 358 ----REMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
R++FD+M +V +WN ++S Y ++ + EA + F M VKP + + +
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 414 CAAMGILESGKQVHAASLKTASHI--DNYVASGLIGIYSKCQRNELAERVFHRIPELDIV 471
+ ++ + LK D +V S I +Y++ E + RVF E +I
Sbjct: 224 VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIE 283
Query: 472 CWNSMIAGLSLNSLDIEAF-MFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQ 530
WN+MI N +E+ +F + + E+ + ++ S+ + L GRQ H
Sbjct: 284 VWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF 343
Query: 531 IEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEA 590
+ K+ I + ++L+ MY +CG ++ + F M ++ V+WN MI + QNG DE
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 591 VRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVE-PILDHYTCMI 649
+ L +M G K D IT A+L+A S+ ++G + ++ + G++ ++ Y +I
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQT-HAFLIRQGIQFEGMNSY--LI 460
Query: 650 DCLGRAGHFHEAEMLIDEMP-CKDDPVIWEVLLS 682
D ++G ++ L + + D W ++S
Sbjct: 461 DMYSKSGLIRISQKLFEGSGYAERDQATWNSMIS 494
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 221/726 (30%), Positives = 356/726 (49%), Gaps = 77/726 (10%)
Query: 70 LEFAYKLFDEMPERNVVSWNNLISALV-RNGLEEKALSVYNKMSN-----EGFVPTHITL 123
L+F K F N ++ ++L++ + R GL + LS + N EG+ I
Sbjct: 3 LQFRAKTF-----FNNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEGY---KILF 54
Query: 124 ASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
+ K+ + +L G+ HG +IK L+ +Y+ N LL++Y KC A +F+ M E
Sbjct: 55 QTAAKSGSVVL----GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPE 110
Query: 184 PNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVF 243
N ++F +++SG + +A+E+F + +D + + LG C E C ++
Sbjct: 111 RNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG-ERCDLD---- 165
Query: 244 AQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSV 303
G+ +H L + G + L N L+DMY+K G +D A +F ER
Sbjct: 166 -----------LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQ 214
Query: 304 VSWNVMIAGYGQKYQSTKAIELLQRM----------------KSC--------------- 332
VSWN +I+GY + + + + LL +M K+C
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Query: 333 -------GFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQ---- 381
G E D V +L ++G +K ++F MPS +V ++NAM+S + Q
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334
Query: 382 -SENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNY 440
E EA KLF +MQ RG++P +T +++L +C+A LE G+Q+HA K D +
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF 394
Query: 441 VASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNE 500
+ S LI +Y+ E + F + DI W SMI N AF F+Q+ +
Sbjct: 395 IGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH 454
Query: 501 MYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGAR 560
+ P +++ + ++S+CA ++ G Q+ K G V ++ I MY K G++ A
Sbjct: 455 IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514
Query: 561 QFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSG 620
Q F + + T++ MI AQ+G +EA+ +++ M G+KP+ F+ +L AC H G
Sbjct: 515 QVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574
Query: 621 LVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVL 680
LV G++ F M+ D+ + P H+TC++D LGR G +AE LI +D PV W L
Sbjct: 575 LVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRAL 634
Query: 681 LSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIV 740
LSSCR++ + + KR AE L L+P+ S Y LL NIY+ G VRELM + +
Sbjct: 635 LSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVK 694
Query: 741 KDPAYS 746
K+PA S
Sbjct: 695 KEPALS 700
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 254/514 (49%), Gaps = 53/514 (10%)
Query: 65 CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
CK +L FA +LFD MPERN++S+N+LIS + G E+A+ ++ + T A
Sbjct: 93 CKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYA 152
Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
D++ G HGLV+ GL + +++ N L+ +Y+KCG A+ +F+ E
Sbjct: 153 GALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER 212
Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFA 244
++V++ +++SG + E L + M R +++ + +L SVL C C ++ F
Sbjct: 213 DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC----CINLNEGFI 268
Query: 245 QSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVV 304
+ G +HC T KLG E D+ + +LLDMYAKNG + A +FS +P ++VV
Sbjct: 269 EK---------GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVV 319
Query: 305 SWNVMIAGYGQKYQ-----STKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGRE 359
++N MI+G+ Q + S++A +L M+ G EP T +L AC + ++ GR+
Sbjct: 320 TYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQ 379
Query: 360 M-----------------------------------FDSMPSPSVSSWNAMLSSYSQSEN 384
+ F S ++SW +M+ + Q+E
Sbjct: 380 IHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQ 439
Query: 385 HKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASG 444
+ A LFR++ ++P+ T+++++S+CA L SG+Q+ ++K+ V +
Sbjct: 440 LESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTS 499
Query: 445 LIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPT 504
I +Y+K LA +VF + D+ +++MI+ L+ + EA F+ M+ + + P
Sbjct: 500 SISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPN 559
Query: 505 QFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVN 538
Q +F VL +C QG + ++ D +N
Sbjct: 560 QQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRIN 593
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 207/460 (45%), Gaps = 90/460 (19%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+LLH ++ NGL FL N LI++YSKC A LFD+ +D SWN+
Sbjct: 167 GELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS------- 219
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
LIS VR G E+ L++ KM +G T L SV
Sbjct: 220 ------------------------LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSV 255
Query: 127 FKASTALLD---VEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSE 183
KA L+ +E G H K+G++ +I V ALL +YAK G K A+ +F M
Sbjct: 256 LKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPS 315
Query: 184 PNEVTFTAMMSGLAKTDRVV-----EALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGV 238
N VT+ AM+SG + D + EA ++F M R+ + + S VL C+
Sbjct: 316 KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSA----- 370
Query: 239 ESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNL 298
A++ +G+Q+H L K F++D + ++L+++YA G + F++
Sbjct: 371 -----AKTLE------YGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAST 419
Query: 299 PERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---------- 348
++ + SW MI + Q Q A +L +++ S P+E T M+ AC
Sbjct: 420 SKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE 479
Query: 349 -------------------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSE 383
+SG++ ++F + +P V++++AM+SS +Q
Sbjct: 480 QIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHG 539
Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESG 423
+ EA+ +F M+ G+KP++ +L +C G++ G
Sbjct: 540 SANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQG 579
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 156/317 (49%), Gaps = 21/317 (6%)
Query: 53 DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVR-----NGLEEKALSV 107
DI A+L K+ L+ A KLF MP +NVV++N +IS ++ + +A +
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 108 YNKMSNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAK 167
+ M G P+ T + V KA +A +E+GR+ H L+ K + ++ +AL+ LYA
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 168 CGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSV 227
G T+ + F S+ + ++T+M+ + +++ A ++FR + + + ++S +
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465
Query: 228 LGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGD 287
+ CA F+ G+Q+ IK G +A + S + MYAK+G+
Sbjct: 466 MSACA----------------DFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGN 509
Query: 288 MDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVA 347
M A +F + V +++ MI+ Q + +A+ + + MK+ G +P++ + +L+A
Sbjct: 510 MPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 348 CVRSGDIKTGREMFDSM 364
C G + G + F M
Sbjct: 570 CCHGGLVTQGLKYFQCM 586
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 122/307 (39%), Gaps = 49/307 (15%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ +HA I +N D F+ + LIELY+ +T F +DI
Sbjct: 377 GRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDI------------ 424
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
SW ++I V+N E A ++ ++ + P T++ +
Sbjct: 425 -------------------ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
A + G + G IK G+D V + +S+YAK G A VF E+ P+
Sbjct: 466 MSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDV 525
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
T++AM+S LA+ EAL +F M + + + VL C G + + Q
Sbjct: 526 ATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQC 585
Query: 247 -DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE-VIFSNLPERSVV 304
N + N + + C L+D+ + G + AE +I S+ + V
Sbjct: 586 MKNDYRINPNEKHFTC----------------LVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 305 SWNVMIA 311
+W +++
Sbjct: 630 TWRALLS 636
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 326 bits (835), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 275/492 (55%), Gaps = 36/492 (7%)
Query: 256 GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQ 315
G+Q+HCL + GF +D + N L+ MY+K GD SA ++ + +++ +S N++I GY
Sbjct: 63 GKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGY-- 120
Query: 316 KYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAM 375
VR+GD+ R++FD MP +++WNAM
Sbjct: 121 ---------------------------------VRAGDLVNARKVFDEMPDRKLTTWNAM 147
Query: 376 LSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTAS 435
++ Q E ++E + LFREM G PD TL + S A + + G+Q+H ++K
Sbjct: 148 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 207
Query: 436 HIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQ 495
+D V S L +Y + + + E V +P ++V WN++I G + N +K
Sbjct: 208 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 267
Query: 496 MRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGD 555
M+ + P + +F TVLSSC+ L+ QG+Q+HA+ K G + + V S+LI MY KCG
Sbjct: 268 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 327
Query: 556 IYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMI-ASGVKPDDITFVAILT 614
+ A + F ++ V W+ MI Y +G GDEA+ L+ M + ++ +++ F+ +L
Sbjct: 328 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 387
Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
ACSHSGL D G+E+F+ M +G +P L HYTC++D LGRAG +AE +I MP K D
Sbjct: 388 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDI 447
Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
VIW+ LLS+C +H N +A+R +E+ ++DP +SA Y LLAN+++S RW D+ VR+ M
Sbjct: 448 VIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSM 507
Query: 735 SENCIVKDPAYS 746
+ + K+ S
Sbjct: 508 RDKNVKKEAGIS 519
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 205/415 (49%), Gaps = 25/415 (6%)
Query: 6 AGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
+GK LH ++ +G D F+CN L+ +YSK + SA ++ +M K+ S N +++
Sbjct: 62 SGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYV 121
Query: 66 KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLAS 125
++ DL A K+FDEMP+R + +WN +I+ L++ E+ LS++ +M GF P TL S
Sbjct: 122 RAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGS 181
Query: 126 VFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPN 185
VF S L V G++ HG IK GL+ ++ V ++L +Y + G + V M N
Sbjct: 182 VFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRN 241
Query: 186 EVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQ 245
V + ++ G A+ L ++++M + ++ +VL C SD+ +
Sbjct: 242 LVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSC--------SDLAIR 293
Query: 246 SDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVS 305
GQQ+H IK+G + + + +SL+ MY+K G + A FS + V
Sbjct: 294 G--------QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM 345
Query: 306 WNVMIAGYGQKYQSTKAIELLQRM-KSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM 364
W+ MI+ YG Q +AIEL M + E +EV +N+L AC SG G E+FD M
Sbjct: 346 WSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM 405
Query: 365 P-----SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
P + + ++ ++ +A + R M +K D +LS+C
Sbjct: 406 VEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMP---IKTDIVIWKTLLSAC 457
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 148/337 (43%), Gaps = 37/337 (10%)
Query: 384 NHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVAS 443
N +EA + FR F + + + SC L SGKQ+H + + D ++ +
Sbjct: 28 NLREAFQRFRLNIF----TNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICN 83
Query: 444 GLIGIYSKC--------------QRNEL-----------------AERVFHRIPELDIVC 472
L+ +YSK ++N + A +VF +P+ +
Sbjct: 84 HLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTT 143
Query: 473 WNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIE 532
WN+MIAGL + E F++M P +++ +V S A L S G+Q+H
Sbjct: 144 WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI 203
Query: 533 KDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVR 592
K G D+ V S+L MY + G + M +N V WN +I G AQNG + +
Sbjct: 204 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 263
Query: 593 LYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCL 652
LYK M SG +P+ ITFV +L++CS + G +I ++ + G ++ + +I
Sbjct: 264 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMY 322
Query: 653 GRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHAN 689
+ G +A E +D V+W ++S+ H
Sbjct: 323 SKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQ 358
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 325 bits (833), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 190/642 (29%), Positives = 328/642 (51%), Gaps = 61/642 (9%)
Query: 143 HGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRV 202
H ++K G +++ N LL+ Y K G+ K A+ +F+EM E N V+F + G A D
Sbjct: 72 HCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQD-- 129
Query: 203 VEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQ---QV 259
+ L S L REG + VF F + +
Sbjct: 130 ------------------PIGLYSRL---HREGHELNPHVFTSFLKLFVSLDKAEICPWL 168
Query: 260 HCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQS 319
H +KLG++++ + +L++ Y+ G +DSA +F + + +V W +++ Y +
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 320 TKAIELLQRMKSCGFEPDEVT-----------------------------------SINM 344
+++LL M+ GF P+ T + +
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 345 LVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDR 404
L + GD+ ++F+ MP V W+ M++ + Q+ EA+ LF M+ V P+
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348
Query: 405 TTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHR 464
TL+ IL+ CA G+Q+H +K +D YV++ LI +Y+KC++ + A ++F
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE 408
Query: 465 IPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQG 524
+ + V WN++I G +AF F++ +N++ T+ +F++ L +CA L+S G
Sbjct: 409 LSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLG 468
Query: 525 RQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQN 584
QVH K + V ++LI+MY KCGDI A+ F+ M + +WN +I GY+ +
Sbjct: 469 VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTH 528
Query: 585 GYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDH 644
G G +A+R+ M KP+ +TF+ +L+ CS++GL+D G E F SM DHG+EP L+H
Sbjct: 529 GLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEH 588
Query: 645 YTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLD 704
YTCM+ LGR+G +A LI+ +P + +IW +LS+ N A+R+AEE+ +++
Sbjct: 589 YTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKIN 648
Query: 705 PKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
PK+ A Y L++N+Y+ +W ++ ++R+ M E + K+P S
Sbjct: 649 PKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLS 690
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 174/334 (52%), Gaps = 21/334 (6%)
Query: 69 DLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFK 128
D+ A+K+F+EMP+ +VV W+ +I+ +NG +A+ ++ +M VP TL+S+
Sbjct: 297 DMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILN 356
Query: 129 ASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVT 188
G + HGLV+K+G D +IYV+NAL+ +YAKC AV +F E+S NEV+
Sbjct: 357 GCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS 416
Query: 189 FTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDN 248
+ ++ G +A MFR +R VS+ V+ SS LG CA A D
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS---------LASMD- 466
Query: 249 KFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNV 308
G QVH L IK + +SNSL+DMYAK GD+ A+ +F+ + V SWN
Sbjct: 467 ------LGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNA 520
Query: 309 MIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFDSM---- 364
+I+GY +A+ +L MK +P+ +T + +L C +G I G+E F+SM
Sbjct: 521 LISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDH 580
Query: 365 -PSPSVSSWNAMLSSYSQSENHKEAIKLFREMQF 397
P + + M+ +S +A+KL + +
Sbjct: 581 GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPY 614
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 137/537 (25%), Positives = 242/537 (45%), Gaps = 48/537 (8%)
Query: 201 RVVEALEMFRLMIR-----------KAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
R++ + RLMIR K ++D S S++ G Q ++
Sbjct: 6 RIIHVAQTRRLMIRCNRIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDP 65
Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
S + +HC +K G DL +N LL+ Y K G A +F +PER+ VS+ +
Sbjct: 66 IS----AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTL 121
Query: 310 IAGYG------------------QKYQSTKAIEL---LQRMKSC----------GFEPDE 338
GY + T ++L L + + C G++ +
Sbjct: 122 AQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNA 181
Query: 339 VTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFR 398
++ A G + + R +F+ + + W ++S Y ++ ++++KL M+
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241
Query: 399 GVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELA 458
G P+ T L + +G + K VH LKT +D V GL+ +Y++ A
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 459 ERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKL 518
+VF+ +P+ D+V W+ MIA N EA F +MR+ + P +F+ +++L+ CA
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG 361
Query: 519 SSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMI 578
S G Q+H + K G+ DI+V +ALI++Y KC + A + F + KN V+WN +I
Sbjct: 362 KCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVI 421
Query: 579 HGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGV 638
GY G G +A ++++ + + V ++TF + L AC+ +D+GV++ + + +
Sbjct: 422 VGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQV-HGLAIKTNN 480
Query: 639 EPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKR 695
+ +ID + G A+ + +EM D W L+S H R A R
Sbjct: 481 AKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISGYSTHGLGRQALR 536
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 142/597 (23%), Positives = 260/597 (43%), Gaps = 58/597 (9%)
Query: 53 DIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMS 112
D+++ N +L+A K+ + A LFDEMPERN VS+ L + + +Y+++
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLH 138
Query: 113 NEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTK 172
EG S K +L E H ++K+G D N +V AL++ Y+ CG
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 173 HAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCA 232
A VFE + + V + ++S + ++L++ M ++ + + L A
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALK--A 256
Query: 233 REGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAE 292
G G F++ VHGQ +K + D + LL +Y + GDM A
Sbjct: 257 SIGLGAFD---------FAKGVHGQ-----ILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 293 VIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC---- 348
+F+ +P+ VV W+ MIA + Q +A++L RM+ P+E T ++L C
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 349 ------------VRSG-------------------DIKTGREMFDSMPSPSVSSWNAMLS 377
V+ G + T ++F + S + SWN ++
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 378 SYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHI 437
Y +A +FRE V T + L +CA++ ++ G QVH ++KT +
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 438 DNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMR 497
V++ LI +Y+KC + A+ VF+ + +D+ WN++I+G S + L +A M+
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK 542
Query: 498 QNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVG-SALIEMYCKCGDI 556
+ P +F VLS C+ QG++ + +D + + ++ + + G +
Sbjct: 543 DRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQL 602
Query: 557 YGARQFFD-MMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAI 612
A + + + + + + W M+ + N +E R + I D+ T+V +
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAMLSA-SMNQNNEEFARRSAEEILKINPKDEATYVLV 658
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 228/509 (44%), Gaps = 88/509 (17%)
Query: 10 LHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCKSDD 69
LH+ I++ G + F+ LI YS C + SA+ +F+ + KDI
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDI--------------- 212
Query: 70 LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKA 129
V W ++S V NG E +L + + M GF+P + T + KA
Sbjct: 213 ----------------VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 130 STALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTF 189
S L + + HG ++K + V LL LY + G A VF EM + + V +
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 190 TAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNK 249
+ M++ + EA+++F M V + +LSS+L CA C
Sbjct: 317 SFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC------------- 363
Query: 250 FSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVM 309
+ G+Q+H L +K+GF+ D+++SN+L+D+YAK MD+A +F+ L ++ VSWN +
Sbjct: 364 ---SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420
Query: 310 IAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVAC--------------------- 348
I GY + KA + + EVT + L AC
Sbjct: 421 IVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN 480
Query: 349 --------------VRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFRE 394
+ GDIK + +F+ M + V+SWNA++S YS ++A+++
Sbjct: 481 AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDI 540
Query: 395 MQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK---TASHIDNYVASGLIGIYSK 451
M+ R KP+ T +LS C+ G+++ G++ + ++ +++Y ++ + +
Sbjct: 541 MKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC--MVRLLGR 598
Query: 452 CQRNELAERVFHRIP-ELDIVCWNSMIAG 479
+ + A ++ IP E ++ W +M++
Sbjct: 599 SGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 132/307 (42%), Gaps = 47/307 (15%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ LH +++ G D ++ N LI++Y+KC +A LF ++ K+ SWN +
Sbjct: 367 GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV------ 420
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
+V + NL G KA S++ + T +T +S
Sbjct: 421 ------------------IVGYENL-------GEGGKAFSMFREALRNQVSVTEVTFSSA 455
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
A +L ++ G + HGL IK K + V+N+L+ +YAKCG K A VF EM +
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDV 515
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
++ A++SG + +AL + +M + + ++ VL C+ G + Q
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAG------LIDQG 569
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLP-ERSVVS 305
F + G E L ++ + ++G +D A + +P E SV+
Sbjct: 570 QECFESMIRDH---------GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620
Query: 306 WNVMIAG 312
W M++
Sbjct: 621 WRAMLSA 627
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 103/264 (39%), Gaps = 49/264 (18%)
Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMM 566
++ +L C + + + +H I K G D+F + L+ Y K G A FD M
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 567 HGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT---------ACS 617
+N V++ + GYA + + LY + G + + F + L C
Sbjct: 111 PERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICP 166
Query: 618 --HSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPV 675
HS +V +G ++S +I+ G A + + + CK D V
Sbjct: 167 WLHSPIVKLG---YDSNAFVGAA---------LINAYSVCGSVDSARTVFEGILCK-DIV 213
Query: 676 IWEVLLS----------SCRLHANVRLAKRAAEELFRLDPKN-SAPYSLLANIYSSLGRW 724
+W ++S S +L + +R+A P N + +L A+I LG +
Sbjct: 214 VWAGIVSCYVENGYFEDSLKLLSCMRMAG--------FMPNNYTFDTALKASI--GLGAF 263
Query: 725 DDLRAVRELMSENCIVKDPAYSLG 748
D + V + + C V DP +G
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVG 287
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 325 bits (833), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 190/590 (32%), Positives = 309/590 (52%), Gaps = 48/590 (8%)
Query: 158 ANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAV 217
A+ ++S+Y A+ +F+ + P + + +++ +AL F M
Sbjct: 42 ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101
Query: 218 SIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNS 277
D SVL C D +F +VHG ++LG + DL+ N+
Sbjct: 102 CPDHNVFPSVLKSCT-----------MMMDLRFGESVHG-----FIVRLGMDCDLYTGNA 145
Query: 278 LLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAI-ELLQRMKSCGFEP 336
L++MYAK + G G K E+ QR + G E
Sbjct: 146 LMNMYAK-------------------------LLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 337 DEVTSINMLVACVRSGDIKTGREMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQ 396
+ + C+ I + R +F+ MP V S+N +++ Y+QS +++A+++ REM
Sbjct: 181 VKAET------CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG 234
Query: 397 FRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNE 456
+KPD TL+ +L + + GK++H ++ D Y+ S L+ +Y+K R E
Sbjct: 235 TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 294
Query: 457 LAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCA 516
+ERVF R+ D + WNS++AG N EA F+QM ++ P +F++V+ +CA
Sbjct: 295 DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACA 354
Query: 517 KLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNE 576
L++ G+Q+H + + G+ ++IF+ SAL++MY KCG+I AR+ FD M+ + V+W
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTA 414
Query: 577 MIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDH 636
+I G+A +G+G EAV L+++M GVKP+ + FVA+LTACSH GLVD FNSM +
Sbjct: 415 IIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY 474
Query: 637 GVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRA 696
G+ L+HY + D LGRAG EA I +M + +W LLSSC +H N+ LA++
Sbjct: 475 GLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV 534
Query: 697 AEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
AE++F +D +N Y L+ N+Y+S GRW ++ +R M + + K PA S
Sbjct: 535 AEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACS 584
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 219/433 (50%), Gaps = 35/433 (8%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKC---NNTHSAQHLFDKMPHKDIYSWNAILSA 63
G+ +H I+R G+ D + N L+ +Y+K + S ++FD+MP + S + + A
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 64 QC--KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHI 121
+ ++ ++F+ MP ++VVS+N +I+ ++G+ E AL + +M P
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 122 TLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEM 181
TL+SV + +DV G+ HG VI+ G+D ++Y+ ++L+ +YAK + + VF +
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 182 SEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESD 241
+ +++ ++++G + R EAL +FR M+ V +V+ SSV+ CA
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA------ 357
Query: 242 VFAQSDNKFSRNVH-GQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE 300
+H G+Q+H ++ GF +++ ++++L+DMY+K G++ +A IF +
Sbjct: 358 -----------TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV 406
Query: 301 RSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREM 360
VSW +I G+ +A+ L + MK G +P++V + +L AC G +
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY 466
Query: 361 FDSMPSPSVSSWNAMLSSYS-------QSENHKEAIKLFREMQFRGVKPDRTTLAIILSS 413
F+SM V N L Y+ ++ +EA +M V+P + + +LSS
Sbjct: 467 FNSM--TKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM---CVEPTGSVWSTLLSS 521
Query: 414 CAAMGILESGKQV 426
C+ LE ++V
Sbjct: 522 CSVHKNLELAEKV 534
Score = 166 bits (419), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 195/416 (46%), Gaps = 87/416 (20%)
Query: 77 FDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASVFKASTALLDV 136
F + V++W ++I L KAL+ + +M G P H SV K+ T ++D+
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 137 EHGRRCHGLVIKIGLDKNIYVANALLSLYAK---------CGWTKHAVP----------- 176
G HG ++++G+D ++Y NAL+++YAK G +P
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 177 ----------------VFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSID 220
VFE M + V++ +++G A++ +AL M R M + D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 221 SVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLD 280
S +LSSVL +F++ + + G+++H I+ G ++D+++ +SL+D
Sbjct: 242 SFTLSSVL------------PIFSE----YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVD 285
Query: 281 MYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVT 340
MYAK+ ++ +E +FS L R +SWN ++AGY Q + +A+ L ++M + +P V
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 341 SINMLVACV-----------------------------------RSGDIKTGREMFDSMP 365
+++ AC + G+IK R++FD M
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 366 SPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILE 421
SW A++ ++ + EA+ LF EM+ +GVKP++ +L++C+ +G+++
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 116/231 (50%), Gaps = 31/231 (13%)
Query: 5 VAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQ 64
+ GK +H +++R G+ D ++ + L+++Y+K ++ +F ++ +D SWN+
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNS----- 313
Query: 65 CKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLA 124
L++ V+NG +AL ++ +M P + +
Sbjct: 314 --------------------------LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 125 SVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEP 184
SV A L + G++ HG V++ G NI++A+AL+ +Y+KCG K A +F+ M+
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407
Query: 185 NEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREG 235
+EV++TA++ G A EA+ +F M R+ V + V+ +VL C+ G
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG 458
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 214/733 (29%), Positives = 358/733 (48%), Gaps = 52/733 (7%)
Query: 52 KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
++I+ + ++S+ + ++F + R++ WN++I A NG ++L + M
Sbjct: 57 ENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSM 116
Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIK-IGLDKNIYVANALLSLYAKCGW 170
G P H T V A LL G HGLV+K G D+N V + + Y+KCG+
Sbjct: 117 LLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGF 176
Query: 171 TKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGV 230
+ A VF+EM + + V +TA++SG + L M +D + ++
Sbjct: 177 LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTL--E 234
Query: 231 CAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDS 290
C + C S++ A + G+ +H +K G + + +S+ Y+K+G+
Sbjct: 235 CGFQAC---SNLGALKE--------GRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSE 283
Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTS---INML-- 345
A + F L + + SW +IA + ++ ++ M++ G PD V IN L
Sbjct: 284 AYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGK 343
Query: 346 VACVRSGDIKTG---REMF--DSMPSPSVSS--------------------------WNA 374
+ V G G R F DS S+ S WN
Sbjct: 344 MMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNT 403
Query: 375 MLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTA 434
ML Y + + H + I+LFR++Q G++ D + ++SSC+ +G + GK +H +KT+
Sbjct: 404 MLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTS 463
Query: 435 SHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIEAFMFFK 494
+ V + LI +Y K +A R+F + +++ WN+MIA +A F
Sbjct: 464 LDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFD 522
Query: 495 QMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCG 554
+M P+ + T+L +C S +G+ +H I + + ++ + +ALI+MY KCG
Sbjct: 523 RMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCG 582
Query: 555 DIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVAILT 614
+ +R+ FD + K+ V WN MI GY +G + A+ L+ M S VKP TF+A+L+
Sbjct: 583 HLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 642
Query: 615 ACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPCKDDP 674
AC+H+GLV+ G ++F M + V+P L HY+C++D L R+G+ EAE + MP D
Sbjct: 643 ACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDG 701
Query: 675 VIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLANIYSSLGRWDDLRAVRELM 734
VIW LLSSC H + R AE DP+N Y +LAN+YS+ G+W++ RE+M
Sbjct: 702 VIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMM 761
Query: 735 SENCIVKDPAYSL 747
E+ + K +S+
Sbjct: 762 RESGVGKRAGHSV 774
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/640 (25%), Positives = 288/640 (45%), Gaps = 89/640 (13%)
Query: 7 GKLLHAHILRNGLFD-DTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQC 65
G +H +L++G FD +T + + YSKC A +FD+MP +D+ +W AI+S
Sbjct: 144 GTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGH- 202
Query: 66 KSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF---VPTHIT 122
V+NG E L KM + G P T
Sbjct: 203 ------------------------------VQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
L F+A + L ++ GR HG +K GL + +V +++ S Y+K G A F E+
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG 292
Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
+ + ++T++++ LA++ + E+ +MF M K + D V +S ++
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI-------------- 338
Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPER- 301
K G+ H I+ F D + NSLL MY K + AE +F + E
Sbjct: 339 --NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEG 396
Query: 302 SVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--- 358
+ +WN M+ GYG+ K IEL +++++ G E D ++ +++ +C G + G+
Sbjct: 397 NKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLH 456
Query: 359 -------------------EMFDSMPSPSVS------------SWNAMLSSYSQSENHKE 387
+++ M +V+ +WNAM++SY E ++
Sbjct: 457 CYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEK 516
Query: 388 AIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIG 447
AI LF M KP TL +L +C G LE G+ +H +T ++ +++ LI
Sbjct: 517 AIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALID 576
Query: 448 IYSKCQRNELAERVFHRIPELDIVCWNSMIAGLSLNSLDIE-AFMFFKQMRQNEMYPTQF 506
+Y+KC E + +F + D VCWN MI+G ++ D+E A F QM ++++ PT
Sbjct: 577 MYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHG-DVESAIALFDQMEESDVKPTGP 635
Query: 507 SFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYCKCGDIYGARQ-FFDM 565
+F +LS+C QG+++ ++ + ++ S L+++ + G++ A M
Sbjct: 636 TFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSM 695
Query: 566 MHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPD 605
+ V W ++ +G + +R+ + +AS + D
Sbjct: 696 PFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQND 735
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 158/640 (24%), Positives = 290/640 (45%), Gaps = 65/640 (10%)
Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
S+ +V HI++ ++ L +E R+ + L+I GL +NI+VA+ L+S YA G
Sbjct: 20 SSASYVDRHISVILCDQS----LSLESLRKHNALIITGGLSENIFVASKLISSYASYGKP 75
Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
+ VF ++ + + +++ +L F M+ S D + V+ C
Sbjct: 76 NLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSAC 135
Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKL-GFEADLHLSNSLLDMYAKNGDMDS 290
A E F G VH L +K GF+ + + S + Y+K G +
Sbjct: 136 A------ELLWFHV----------GTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQD 179
Query: 291 AEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINM---LVA 347
A ++F +P+R VV+W +I+G+ Q +S + L +M S G + D+ + A
Sbjct: 180 ACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQA 239
Query: 348 CVRSGDIKTGREM-----------------------------------FDSMPSPSVSSW 372
C G +K GR + F + + SW
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSW 299
Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLK 432
++++S ++S + +E+ +F EMQ +G+ PD ++ +++ M ++ GK H ++
Sbjct: 300 TSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIR 359
Query: 433 TASHIDNYVASGLIGIYSKCQRNELAERVFHRIPEL-DIVCWNSMIAGLSLNSLDIEAFM 491
+D+ V + L+ +Y K + +AE++F RI E + WN+M+ G ++
Sbjct: 360 HCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIE 419
Query: 492 FFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDIFVGSALIEMYC 551
F++++ + S +V+SSC+ + + G+ +H + K I V ++LI++Y
Sbjct: 420 LFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYG 479
Query: 552 KCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKDMIASGVKPDDITFVA 611
K GD+ A + F N +TWN MI Y ++A+ L+ M++ KP IT V
Sbjct: 480 KMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVT 538
Query: 612 ILTACSHSGLVDVGVEIFNSM-QLDHGVEPILDHYTCMIDCLGRAGHFHEAEMLIDEMPC 670
+L AC ++G ++ G I + + +H E L +ID + GH ++ L D
Sbjct: 539 LLMACVNTGSLERGQMIHRYITETEH--EMNLSLSAALIDMYAKCGHLEKSRELFDAGNQ 596
Query: 671 KDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAP 710
K D V W V++S +H +V A +++ D K + P
Sbjct: 597 K-DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGP 635
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 159/401 (39%), Gaps = 85/401 (21%)
Query: 3 AHVAGKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILS 62
A + GK LH ++++ L + N LI+LY K + A +F + ++ +WNA+++
Sbjct: 448 AVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIA 506
Query: 63 AQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHIT 122
+ + E A LFD +M +E F P+ IT
Sbjct: 507 SYVHCEQSEKAIALFD-------------------------------RMVSENFKPSSIT 535
Query: 123 LASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMS 182
L ++ A +E G+ H + + + N+ ++ AL+ +YAKCG + + +F+ +
Sbjct: 536 LVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN 595
Query: 183 EPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDV 242
+ + V + M+SG V A+ +F M V + ++L C G
Sbjct: 596 QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAG------- 648
Query: 243 FAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERS 302
+ K +H V + +L + L+D+ +++G+++ AE ++P
Sbjct: 649 LVEQGKKLFLKMHQYDV---------KPNLKHYSCLVDLLSRSGNLEEAESTVMSMP--- 696
Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
F PD V +L +C+ G+ + G M +
Sbjct: 697 -------------------------------FSPDGVIWGTLLSSCMTHGEFEMGIRMAE 725
Query: 363 SMPS--PSVSSWNAMLSS-YSQSENHKEAIKLFREMQFRGV 400
+ P + ML++ YS + +EA + M+ GV
Sbjct: 726 RAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGV 766
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/630 (29%), Positives = 318/630 (50%), Gaps = 53/630 (8%)
Query: 156 YVANALLSLYAKCGWTKHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRK 215
++ + L YA CG +A +FEEM + + +++ ++ + +A+ +F M+ +
Sbjct: 50 HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSE 109
Query: 216 AVSIDSVSLSSVLGVCAREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLS 275
V C +G A++ + G VH ++ F D ++
Sbjct: 110 GVK------------CVPDG--YTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQ 155
Query: 276 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 335
N+LL MY G ++ A +F + R V+SWN MI+GY + A+ + M + +
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215
Query: 336 PDEVTSINMLVACVRSGDIKTGREM----------------------------------- 360
D T ++ML C D++ GR +
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 361 FDSMPSPSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGIL 420
FD M V +W M++ Y++ + + A++L R MQF GV+P+ T+A ++S C +
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 421 ESGKQVHAASLKTASHIDNYVASGLIGIYSKCQRNELAERVFHRIPELDIVCWNSMIAGL 480
GK +H +++ + D + + LI +Y+KC+R +L RVF + W+++IAG
Sbjct: 336 NDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGC 395
Query: 481 SLNSLDIEAFMFFKQMRQNEMYPTQFSFATVLSSCAKLSSSFQGRQVHAQIEKDGYVNDI 540
N L +A FK+MR+ ++ P + ++L + A L+ Q +H + K G+++ +
Sbjct: 396 VQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSL 455
Query: 541 FVGSALIEMYCKCGDIYGARQFFDMMH----GKNTVTWNEMIHGYAQNGYGDEAVRLYKD 596
+ L+ +Y KCG + A + F+ + K+ V W +I GY +G G A++++ +
Sbjct: 456 DAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFME 515
Query: 597 MIASGVKPDDITFVAILTACSHSGLVDVGVEIFNSMQLDHGVEPILDHYTCMIDCLGRAG 656
M+ SGV P++ITF + L ACSHSGLV+ G+ +F M + +HYTC++D LGRAG
Sbjct: 516 MVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAG 575
Query: 657 HFHEAEMLIDEMPCKDDPVIWEVLLSSCRLHANVRLAKRAAEELFRLDPKNSAPYSLLAN 716
EA LI +P + +W LL++C H NV+L + AA +LF L+P+N+ Y LLAN
Sbjct: 576 RLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLAN 635
Query: 717 IYSSLGRWDDLRAVRELMSENCIVKDPAYS 746
IY++LGRW D+ VR +M + K P +S
Sbjct: 636 IYAALGRWKDMEKVRSMMENVGLRKKPGHS 665
Score = 199 bits (507), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 233/488 (47%), Gaps = 57/488 (11%)
Query: 70 LEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGF--VPTHITLASVF 127
+ +A KLF+EMP+ +++S+N +I VR GL A+SV+ +M +EG VP T V
Sbjct: 65 ITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVA 124
Query: 128 KASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNEV 187
KA+ L ++ G HG +++ ++ YV NALL++Y G + A VF+ M + +
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 188 TFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQSD 247
++ M+SG + + +AL MF M+ ++V +D ++ S+L VC D
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGH-----------LKD 233
Query: 248 NKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPERSVVSWN 307
+ RNVH L + + + N+L++MY K G MD A +F + R V++W
Sbjct: 234 LEMGRNVHK-----LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWT 288
Query: 308 VMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGR--------- 358
MI GY + A+EL + M+ G P+ VT +++ C + + G+
Sbjct: 289 CMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQ 348
Query: 359 --------------------------EMFDSMPSPSVSSWNAMLSSYSQSENHKEAIKLF 392
+F W+A+++ Q+E +A+ LF
Sbjct: 349 QVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLF 408
Query: 393 REMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASLKTASHIDNYVASGLIGIYSKC 452
+ M+ V+P+ TL +L + AA+ L +H KT A+GL+ +YSKC
Sbjct: 409 KRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKC 468
Query: 453 QRNELAERVFHRIPE----LDIVCWNSMIAGLSLNSLDIEAFMFFKQMRQNEMYPTQFSF 508
E A ++F+ I E D+V W ++I+G ++ A F +M ++ + P + +F
Sbjct: 469 GTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITF 528
Query: 509 ATVLSSCA 516
+ L++C+
Sbjct: 529 TSALNACS 536
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 214/471 (45%), Gaps = 61/471 (12%)
Query: 52 KDIYSWNAILSAQCKSDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKM 111
+D Y NA+L+ +E A +FD M R+V+SWN +IS RNG AL +++ M
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 112 SNEGFVPTHITLASVFKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWT 171
NE H T+ S+ L D+E GR H LV + L I V NAL+++Y KCG
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 172 KHAVPVFEEMSEPNEVTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVC 231
A VF+ M + +T+T M++G + V ALE+ RLM + V ++V+++S++ VC
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 232 AREGCGVESDVFAQSDNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSA 291
D +D G+ +H ++ +D+ + SL+ MYAK +D
Sbjct: 330 G--------DALKVND--------GKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 292 EVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACV-- 349
+FS + W+ +IAG Q + A+ L +RM+ EP+ T ++L A
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAAL 433
Query: 350 ---------------------------------RSGDIKTGREMFDSM----PSPSVSSW 372
+ G +++ ++F+ + S V W
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 373 NAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSCAAMGILESGKQVHAASL- 431
A++S Y + A+++F EM GV P+ T L++C+ G++E G + L
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
Query: 432 --KTASHIDNYVASGLIGIYSKCQRNELAERVFHRIP-ELDIVCWNSMIAG 479
KT + ++Y ++ + + R + A + IP E W +++A
Sbjct: 554 HYKTLARSNHYTC--IVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 184/417 (44%), Gaps = 59/417 (14%)
Query: 7 GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 66
G+ +H + L D + N L+ +Y KC A+ +FD+M +D+ +W +++ +
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE 296
Query: 67 SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 126
D+ E AL + M EG P +T+AS+
Sbjct: 297 DGDV-------------------------------ENALELCRLMQFEGVRPNAVTIASL 325
Query: 127 FKASTALLDVEHGRRCHGLVIKIGLDKNIYVANALLSLYAKCGWTKHAVPVFEEMSEPNE 186
L V G+ HG ++ + +I + +L+S+YAKC VF S+ +
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHT 385
Query: 187 VTFTAMMSGLAKTDRVVEALEMFRLMIRKAVSIDSVSLSSVLGVCAREGCGVESDVFAQS 246
++A+++G + + V +AL +F+ M R+ V + +L+S+L A A +
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYA-----------ALA 434
Query: 247 DNKFSRNVHGQQVHCLTIKLGFEADLHLSNSLLDMYAKNGDMDSAEVIFSNLPE----RS 302
D + + N +HC K GF + L + L+ +Y+K G ++SA IF+ + E +
Sbjct: 435 DLRQAMN-----IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 303 VVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFEPDEVTSINMLVACVRSGDIKTGREMFD 362
VV W +I+GYG A+++ M G P+E+T + L AC SG ++ G +F
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 363 SMPS-----PSVSSWNAMLSSYSQSENHKEAIKLFREMQFRGVKPDRTTLAIILSSC 414
M + + ++ ++ EA L + F +P T +L++C
Sbjct: 550 FMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPF---EPTSTVWGALLAAC 603
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 269,028,346
Number of Sequences: 539616
Number of extensions: 11066692
Number of successful extensions: 38711
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 24813
Number of HSP's gapped (non-prelim): 3488
length of query: 748
length of database: 191,569,459
effective HSP length: 125
effective length of query: 623
effective length of database: 124,117,459
effective search space: 77325176957
effective search space used: 77325176957
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)