BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041746
(472 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 86/165 (52%), Gaps = 29/165 (17%)
Query: 308 LETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNA-EFTNEVLLI 366
L L VAS+NFS+ N+LG+GGFG VYKG L+DG VAV+RL QG +F EV +I
Sbjct: 30 LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMI 89
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXX 426
H+NL++L GFC+ E+LLVY +M N S+ + L
Sbjct: 90 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL----------------------- 126
Query: 427 XXXXXXXXPRKRGLLCWSKRITIVNGIAKGILYVHEDSRLRIIHR 471
P + L W KR I G A+G+ Y+H+ +IIHR
Sbjct: 127 -----RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHR 166
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 85/165 (51%), Gaps = 29/165 (17%)
Query: 308 LETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNA-EFTNEVLLI 366
L L VAS+NF + N+LG+GGFG VYKG L+DG VAV+RL QG +F EV +I
Sbjct: 22 LRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMI 81
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXX 426
H+NL++L GFC+ E+LLVY +M N S+ + L
Sbjct: 82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL----------------------- 118
Query: 427 XXXXXXXXPRKRGLLCWSKRITIVNGIAKGILYVHEDSRLRIIHR 471
P + L W KR I G A+G+ Y+H+ +IIHR
Sbjct: 119 -----RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHR 158
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 31/170 (18%)
Query: 302 QDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTN 361
+ + + L L A+NNF ++G G FG VYKGVL DG +VA++R + S QG EF
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 362 EVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQN 421
E+ + +H +LV L+GFC + +E +L+Y++M N +L L+G +P S
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD-------LPTMS-- 135
Query: 422 XXXXXXXXXXXXXPRKRGLLCWSKRITIVNGIAKGILYVHEDSRLRIIHR 471
+ W +R+ I G A+G+ Y+H + IIHR
Sbjct: 136 -------------------MSWEQRLEICIGAARGLHYLHTRA---IIHR 163
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 31/170 (18%)
Query: 302 QDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTN 361
+ + + L L A+NNF ++G G FG VYKGVL DG +VA++R + S QG EF
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 362 EVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQN 421
E+ + +H +LV L+GFC + +E +L+Y++M N +L L+G +P S
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD-------LPTMS-- 135
Query: 422 XXXXXXXXXXXXXPRKRGLLCWSKRITIVNGIAKGILYVHEDSRLRIIHR 471
+ W +R+ I G A+G+ Y+H + IIHR
Sbjct: 136 -------------------MSWEQRLEICIGAARGLHYLHTRA---IIHR 163
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 82/167 (49%), Gaps = 43/167 (25%)
Query: 315 SNNFSD------SNMLGQGGFGPVYKGVLSDGKEVAVERLSS----CSEQGNAEFTNEVL 364
+NNF + N +G+GGFG VYKG +++ VAV++L++ +E+ +F E+
Sbjct: 24 TNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIK 82
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXX 424
++ K QH+NLV+LLGF DGD+ LVY +MPN SL R S PL+
Sbjct: 83 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD-----RLSCLDGTPPLS------ 131
Query: 425 XXXXXXXXXXPRKRGLLCWSKRITIVNGIAKGILYVHEDSRLRIIHR 471
W R I G A GI ++HE+ IHR
Sbjct: 132 ------------------WHMRCKIAQGAANGINFLHENHH---IHR 157
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 82/167 (49%), Gaps = 43/167 (25%)
Query: 315 SNNFSD------SNMLGQGGFGPVYKGVLSDGKEVAVERLSS----CSEQGNAEFTNEVL 364
+NNF + N +G+GGFG VYKG +++ VAV++L++ +E+ +F E+
Sbjct: 24 TNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIK 82
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXX 424
++ K QH+NLV+LLGF DGD+ LVY +MPN SL R S PL+
Sbjct: 83 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD-----RLSCLDGTPPLS------ 131
Query: 425 XXXXXXXXXXPRKRGLLCWSKRITIVNGIAKGILYVHEDSRLRIIHR 471
W R I G A GI ++HE+ IHR
Sbjct: 132 ------------------WHMRCKIAQGAANGINFLHENHH---IHR 157
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 82/167 (49%), Gaps = 43/167 (25%)
Query: 315 SNNFSD------SNMLGQGGFGPVYKGVLSDGKEVAVERLSS----CSEQGNAEFTNEVL 364
+NNF + N +G+GGFG VYKG +++ VAV++L++ +E+ +F E+
Sbjct: 18 TNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIK 76
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXX 424
++ K QH+NLV+LLGF DGD+ LVY +MPN SL R S PL+
Sbjct: 77 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD-----RLSCLDGTPPLS------ 125
Query: 425 XXXXXXXXXXPRKRGLLCWSKRITIVNGIAKGILYVHEDSRLRIIHR 471
W R I G A GI ++HE+ IHR
Sbjct: 126 ------------------WHMRCKIAQGAANGINFLHENHH---IHR 151
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 79/167 (47%), Gaps = 43/167 (25%)
Query: 315 SNNFSD------SNMLGQGGFGPVYKGVLSDGKEVAVERLSS----CSEQGNAEFTNEVL 364
+NNF + N G+GGFG VYKG +++ VAV++L++ +E+ +F E+
Sbjct: 15 TNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIK 73
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXX 424
+ K QH+NLV+LLGF DGD+ LVY + PN SL R S PL+
Sbjct: 74 VXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLD-----RLSCLDGTPPLS------ 122
Query: 425 XXXXXXXXXXPRKRGLLCWSKRITIVNGIAKGILYVHEDSRLRIIHR 471
W R I G A GI ++HE+ IHR
Sbjct: 123 ------------------WHXRCKIAQGAANGINFLHENHH---IHR 148
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 306 IDLETLHVASNNFSDSNMLGQGGFGPVYKGVL------SDGKEVAVERLSSCSEQGNAEF 359
+D H+ +N LG+G FG V+ D VAV+ L S+ +F
Sbjct: 3 MDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDF 62
Query: 360 TNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
E L+ LQH+++VK G CV+GD ++V+E+M + L+ L
Sbjct: 63 HREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 106
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 51/199 (25%)
Query: 282 ASKTGLHYQHVLGRDDDLKAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGV---LS 338
A +G+H QH+ RD LK + LG+G FG V+ LS
Sbjct: 2 AMHSGIHVQHIKRRDIVLKRE---------------------LGEGAFGKVFLAECYNLS 40
Query: 339 DGKE---VAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
K+ VAV+ L + +F E L+ LQH+++VK G C DGD ++V+E+M
Sbjct: 41 PTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMK 100
Query: 396 NSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXXXXXXXXPRK-RGLLCWSKRITIVNGIA 454
+ L+ L R ++ ++ Q PR+ +G L S+ + I + IA
Sbjct: 101 HGDLNKFL---RAHGPDAMILVDGQ--------------PRQAKGELGLSQMLHIASQIA 143
Query: 455 KGILY------VHEDSRLR 467
G++Y VH D R
Sbjct: 144 SGMVYLASQHFVHRDLATR 162
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVL------SDGKEVAVERLSSCSEQGNAEFTNEVLL 365
H+ + LG+G FG V+ D VAV+ L SE +F E L
Sbjct: 14 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 73
Query: 366 ILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
+ LQH+++V+ G C +G L+V+E+M + L+ L
Sbjct: 74 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 111
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVL------SDGKEVAVERLSSCSEQGNAEFTNEVLL 365
H+ + LG+G FG V+ D VAV+ L SE +F E L
Sbjct: 8 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 67
Query: 366 ILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
+ LQH+++V+ G C +G L+V+E+M + L+ L
Sbjct: 68 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 105
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 303 DFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVL------SDGKEVAVERLSSCSEQGN 356
++ D H+ + LG+G FG V+ D VAV+ L SE
Sbjct: 28 QYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR 87
Query: 357 AEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
+F E L+ LQH+++V+ G C +G L+V+E+M + L+ L
Sbjct: 88 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I KL H+N+V+ +G + + ++ E M L + L R
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 129
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I KL H+N+V+ +G + + ++ E M L + L R
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 143
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I K H+N+V+ +G + + ++ E M L + L R
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 129
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I K H+N+V+ +G + + ++ E M L + L R
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 129
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I K H+N+V+ +G + + ++ E M L + L R
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 155
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I K H+N+V+ +G + + ++ E M L + L R
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 135
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I K H+N+V+ +G + + ++ E M L + L R
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETR 143
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I K H+N+V+ +G + + ++ E M L + L R
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 145
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I K H+N+V+ +G + + ++ E M L + L R
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETR 128
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I K H+N+V+ +G + + ++ E M L + L R
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 169
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I K H+N+V+ +G + + ++ E M L + L R
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 120
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I K H+N+V+ +G + + ++ E M L + L R
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 146
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSS-CSEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L CSEQ +F E L
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I K H+N+V+ +G + + ++ E M L + L R
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 128
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 287 LHYQHVLGRDDDLKAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVL--SDGKE-- 342
L++Q +G D + F T + + + ++G G FG VYKG+L S GK+
Sbjct: 20 LYFQGAMGSDPNQAVLKF-----TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEV 74
Query: 343 -VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLD 400
VA++ L + +E+ +F E ++ + H N+++L G +++ E+M N +LD
Sbjct: 75 PVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD 134
Query: 401 AIL 403
L
Sbjct: 135 KFL 137
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 322 NMLGQGGFGPVYKGVLSDGKE-----VAVERLSSCS-EQGNAEFTNEVLLILKLQHKNLV 375
+LG G FG VYKG+ E VA++ L+ + + N EF +E L++ + H +LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSL 399
+LLG C+ + LV + MP+ L
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCL 126
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 322 NMLGQGGFGPVYKGVLSDGKE-----VAVERLSSCS-EQGNAEFTNEVLLILKLQHKNLV 375
+LG G FG VYKG+ E VA++ L+ + + N EF +E L++ + H +LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSL 399
+LLG C+ + LV + MP+ L
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCL 103
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 301 AQDFYIDLETLHVASNNFSDSNMLGQGGFGPVY----KGVLSDGKE--VAVERLS-SCSE 353
A D Y+ E VA + S LGQG FG VY KGV+ D E VA++ ++ + S
Sbjct: 1 AADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 59
Query: 354 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+ EF NE ++ + ++V+LLG G L++ E M L + L +R
Sbjct: 60 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 113
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 299 LKAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVY----KGVLSDGKE--VAVERLS-SC 351
+ A D Y+ E VA + S LGQG FG VY KGV+ D E VA++ ++ +
Sbjct: 2 VSAADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 352 SEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
S + EF NE ++ + ++V+LLG G L++ E M L + L +R
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 116
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 301 AQDFYIDLETLHVASNNFSDSNMLGQGGFGPVY----KGVLSDGKE--VAVERLS-SCSE 353
A D Y+ E VA + S LGQG FG VY KGV+ D E VA++ ++ + S
Sbjct: 33 AADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 91
Query: 354 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+ EF NE ++ + ++V+LLG G L++ E M L + L +R
Sbjct: 92 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 145
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 301 AQDFYIDLETLHVASNNFSDSNMLGQGGFGPVY----KGVLSDGKE--VAVERLS-SCSE 353
A D Y+ E VA + S LGQG FG VY KGV+ D E VA++ ++ + S
Sbjct: 11 AADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 69
Query: 354 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+ EF NE ++ + ++V+LLG G L++ E M L + L +R
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 123
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 299 LKAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVY----KGVLSDGKE--VAVERLS-SC 351
+ A D Y+ E VA + S LGQG FG VY KGV+ D E VA++ ++ +
Sbjct: 2 VSAADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 352 SEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
S + EF NE ++ + ++V+LLG G L++ E M L + L +R
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 116
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 301 AQDFYIDLETLHVASNNFSDSNMLGQGGFGPVY----KGVLSDGKE--VAVERL-SSCSE 353
A D Y+ E VA + S LGQG FG VY KGV+ D E VA++ + + S
Sbjct: 5 AADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 63
Query: 354 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+ EF NE ++ + ++V+LLG G L++ E M L + L +R
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 117
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 301 AQDFYIDLETLHVASNNFSDSNMLGQGGFGPVY----KGVLSDGKE--VAVERL-SSCSE 353
A D Y+ E VA + S LGQG FG VY KGV+ D E VA++ + + S
Sbjct: 11 AADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 69
Query: 354 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+ EF NE ++ + ++V+LLG G L++ E M L + L +R
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 123
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 301 AQDFYIDLETLHVASNNFSDSNMLGQGGFGPVY----KGVLSDGKE--VAVERLS-SCSE 353
A D Y+ E VA + S LGQG FG VY KGV+ D E VA++ ++ + S
Sbjct: 5 AADVYVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 63
Query: 354 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+ EF NE ++ + ++V+LLG G L++ E M L + L +R
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 117
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERLSSC-SEQGNAEFTNEVL 364
V N + LG G FG VY+G +S +VAV+ L SEQ +F E L
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+I K H+N+V+ +G + + ++ E M L + L R
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 143
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 301 AQDFYIDLETLHVASNNFSDSNMLGQGGFGPVY----KGVLSDGKE--VAVERLS-SCSE 353
A D ++ E VA + S LGQG FG VY KGV+ D E VA++ ++ + S
Sbjct: 2 AADVFVPDE-WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 60
Query: 354 QGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
+ EF NE ++ + ++V+LLG G L++ E M L + L +R
Sbjct: 61 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 114
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 324 LGQGGFGPVYKGVLSD--------GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLV 375
LGQG F ++KGV + EV ++ L + F ++ KL HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
G CV GDE +LV EF+ SLD L
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYL 103
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVY----KGVLSDGKE--VAVERLS-SCSEQGNAEFTNEVL 364
VA + S LGQG FG VY KGV+ D E VA++ ++ + S + EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
++ + ++V+LLG G L++ E M L + L +R
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 110
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVY----KGVLSDGKE--VAVERLS-SCSEQGNAEFTNEVL 364
VA + S LGQG FG VY KGV+ D E VA++ ++ + S + EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
++ + ++V+LLG G L++ E M L + L +R
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 110
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 312 HVASNNFSDSNMLGQGGFGPVY----KGVLSDGKE--VAVERL-SSCSEQGNAEFTNEVL 364
VA + S LGQG FG VY KGV+ D E VA++ + + S + EF NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
++ + ++V+LLG G L++ E M L + L +R
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 108
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 324 LGQGGFGPVYKGVLSD--------GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLV 375
LGQG F ++KGV + EV ++ L + F ++ KL HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
G C GDE +LV EF+ SLD L
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL 103
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 298 DLKAQDFYID-LETLHVASNNFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQG 355
DL ++ Y ++ + + + + LG G +G VY GV VAV+ L + +
Sbjct: 13 DLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV 72
Query: 356 NAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
EF E ++ +++H NLV+LLG C +V E+MP +L
Sbjct: 73 E-EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNL 115
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 316 NNFSDSNMLGQGGFGPVYK----GVLS--DGKEVAVERL-SSCSEQGNAEFTNEVLLILK 368
NN +G+G FG V++ G+L VAV+ L S A+F E L+ +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 369 LQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXX 428
+ N+VKLLG C G L++E+M L+ L M + L+ +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMS---PHTVCSLSHSDLSTRARV 163
Query: 429 XXXXXXPRKRGLLCWSKRITIVNGIAKGILYVHEDSRLRIIHR 471
P L ++++ I +A G+ Y+ E + +HR
Sbjct: 164 SSPGPPP-----LSCAEQLCIARQVAAGMAYLSER---KFVHR 198
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 381
+G G FG V+ G + +VA++ R + SE+ +F E +++KL H LV+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 382 VDGDEKLLVYEFMPNSSLDAILFGMRFSFS 411
++ LV+EFM + L L R F+
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFA 101
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 379 GFCVDGDEK--LLVYEFMPNSSLDAIL 403
G C + L+ EF+P SL L
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYL 107
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG V+ G + +VA++ + S +F E +++KL H LV+L G C++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFS 411
LV+EFM + L L R F+
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFA 121
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 381
+G G FG V+ G + +VA++ R + SE+ +F E +++KL H LV+L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 382 VDGDEKLLVYEFMPNSSLDAILFGMRFSFS 411
++ LV+EFM + L L R F+
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFA 99
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 381
+G G FG V+ G + +VA++ R + SE+ +F E +++KL H LV+L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 382 VDGDEKLLVYEFMPNSSLDAILFGMRFSFS 411
++ LV+EFM + L L R F+
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFA 104
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 381
+G G FG V+ G + +VA++ R + SE+ +F E +++KL H LV+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 382 VDGDEKLLVYEFMPNSSLDAILFGMRFSFS 411
++ LV+EFM + L L R F+
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFA 101
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 306 IDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVL 364
+ L+ + + + + LG G FG VY+GV VAV+ L + + EF E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 59
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
++ +++H NLV+LLG C ++ EFM +L
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 94
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKG-VLSDGKEVAVERLSSCSEQGNA-------EFTNEVL 364
+A N +G+GGFG V+KG ++ D VA++ L +G EF EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
++ L H N+VKL G + +V EF+P
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVP 104
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKG-VLSDGKEVAVERLSSCSEQGNA-------EFTNEVL 364
+A N +G+GGFG V+KG ++ D VA++ L +G EF EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
++ L H N+VKL G + +V EF+P
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVP 104
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKG-VLSDGKEVAVERLSSCSEQGNA-------EFTNEVL 364
+A N +G+GGFG V+KG ++ D VA++ L +G EF EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
++ L H N+VKL G + +V EF+P
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVP 104
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 322 NMLGQGGFGPVYKGVL-SDGKE---VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVK 376
++G G FG V +G L + GK+ VA++ L +E+ EF +E ++ + +H N+++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAIL 403
L G + +++ EFM N +LD+ L
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFL 106
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 322 NMLGQGGFGPVYKGVL-SDGKE---VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVK 376
++G G FG V +G L + GK+ VA++ L +E+ EF +E ++ + +H N+++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAIL 403
L G + +++ EFM N +LD+ L
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFL 108
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V G +VA++ + S EF E +++ L H+ LV+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFS 411
++ E+M N L L MR F
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQ 103
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V G +VA++ + S EF E +++ L H+ LV+L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFS 411
++ E+M N L L MR F
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQ 102
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V G +VA++ + S EF E +++ L H+ LV+L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFS 411
++ E+M N L L MR F
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQ 98
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V G +VA++ + S EF E +++ L H+ LV+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFS 411
++ E+M N L L MR F
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQ 103
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 38/155 (24%)
Query: 321 SNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAE----FTNEVLLILKLQHKNLVK 376
++G GGFG VY+ G EVAV+ ++ ++ E L L+H N++
Sbjct: 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXXXXXXXXPR 436
L G C+ LV EF L+ +L G R
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI------------------------ 106
Query: 437 KRGLLCWSKRITIVNGIAKGILYVHEDSRLRIIHR 471
L+ W+ + IA+G+ Y+H+++ + IIHR
Sbjct: 107 ---LVNWAVQ------IARGMNYLHDEAIVPIIHR 132
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLS--DGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E+M N SLD+ L F+ I
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V G +VA++ + S EF E +++ L H+ LV+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSF 410
++ E+M N L L MR F
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRF 117
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKG--VLSDGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 42 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 101
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E+M N SLD+ L F+ I
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 145
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V G +VA++ + S EF E +++ L H+ LV+L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFS 411
++ E+M N L L MR F
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQ 109
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V G +VA++ + S EF E +++ L H+ LV+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSF 410
++ E+M N L L MR F
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRF 117
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLS--DGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 74
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E+M N SLD+ L F+ I
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 118
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLS--DGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E+M N SLD+ L F+ I
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLS--DGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E+M N SLD+ L F+ I
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 306 IDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVL 364
+ L+ + + + + LG G +G VY+GV VAV+ L + + EF E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 59
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
++ +++H NLV+LLG C ++ EFM +L
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 94
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLS--DGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E+M N SLD+ L F+ I
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSL 103
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLS--DGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 32 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 91
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E+M N SLD+ L F+ I
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 135
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSL 100
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSL 99
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKG--VLSDGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E+M N SLD+ L F+ I
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSL 104
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 308 LETLHVASNNFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLI 366
L+ + + + + LG G +G VY+GV VAV+ L + + EF E ++
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 61
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
+++H NLV+LLG C ++ EFM +L
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 94
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSL 105
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSL 131
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSL 103
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLS--DGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E+M N SLD+ L F+ I
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSL 106
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 381
+G G FG V+ G + +VA++ R + SE+ +F E +++KL H LV+L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 382 VDGDEKLLVYEFMPNSSLDAILFGMRFSFS 411
++ LV EFM + L L R F+
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFA 102
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSL 98
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSL 107
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSL 101
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSL 100
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKG--VLSDGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E+M N SLD+ L F+ I
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSL 118
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSL 100
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 324 LGQGGFGPVYK---GVLSD--GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+G FG V L D G+ VAV++L +E+ +F E+ ++ LQH N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 379 GFCVDGDEK--LLVYEFMPNSSL 399
G C + L+ E++P SL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSL 118
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 324 LGQGGFGPV-YKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
+G+G G V V S GK VAV+++ +Q NEV+++ QH+N+V++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 383 DGDEKLLVYEFMPNSSLDAILFGMRFS 409
GDE +V EF+ +L I+ R +
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMN 118
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGVLSDGK----EVAVERLSS-CSEQGNAEFTNEVLLIL 367
+A + + +LG+G FG VY+GV ++ K VAV+ C+ +F +E +++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 368 KLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
L H ++VKL+G ++ + ++ E P L
Sbjct: 65 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL 95
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 324 LGQGGFGPV-YKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
+G+G G V V S GK VAV+++ +Q NEV+++ QH+N+V++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 383 DGDEKLLVYEFMPNSSLDAILFGMRFS 409
GDE +V EF+ +L I+ R +
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMN 123
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 324 LGQGGFGPV-YKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
+G+G G V V S GK VAV+++ +Q NEV+++ QH+N+V++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 383 DGDEKLLVYEFMPNSSLDAILFGMRFS 409
GDE +V EF+ +L I+ R +
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMN 114
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 314 ASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFT-NEVLLILKLQH 371
+S+ F LG G + VYKG+ + G VA++ + SE+G E+ L+ +L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 372 KNLVKLLGFCVDGDEKLLVYEFMPN 396
+N+V+L ++ LV+EFM N
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN 87
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L++ + MP
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQLIM-QLMP 103
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
+ + ++ +LLG C+ +L++ + MP L
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXL 104
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 324 LGQGGFGPV-YKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
+G+G G V V S GK VAV+++ +Q NEV+++ QH+N+V++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 383 DGDEKLLVYEFMPNSSLDAILFGMRFS 409
GDE +V EF+ +L I+ R +
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMN 125
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 324 LGQGGFGPV-YKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
+G+G G V V S GK VAV+++ +Q NEV+++ QH+N+V++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 383 DGDEKLLVYEFMPNSSLDAILFGMRFS 409
GDE +V EF+ +L I+ R +
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMN 245
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGVLSDGK----EVAVERLSS-CSEQGNAEFTNEVLLIL 367
+A + + +LG+G FG VY+GV ++ K VAV+ C+ +F +E +++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 368 KLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
L H ++VKL+G ++ + ++ E P L
Sbjct: 81 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL 111
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGVLSDGK----EVAVERLSS-CSEQGNAEFTNEVLLIL 367
+A + + +LG+G FG VY+GV ++ K VAV+ C+ +F +E +++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 368 KLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
L H ++VKL+G ++ + ++ E P L
Sbjct: 69 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL 99
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L++ + MP
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIM-QLMP 101
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L++ + MP
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIM-QLMP 101
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L++ + MP
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQLIM-QLMP 103
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L++ + MP
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQLIM-QLMP 100
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L++ + MP
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIM-QLMP 101
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 321 SNMLGQGGFGPVYKGVLS-DGKE---VAVERLS-SCSEQGNAEFTNEVLLILKLQHKNLV 375
++G G FG V G L GK VA++ L +E+ +F E ++ + H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
L G G ++V EFM N +LDA L F+ I
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI 145
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L++ + MP
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIM-QLMP 99
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
+ + ++ +LLG C+ +L+ + MP L
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXL 103
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L++ + MP
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLIM-QLMP 102
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 93
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 324 LGQGGFGPV-YKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
+G+G G V V S GK VAV+++ +Q NEV+++ QH+N+V++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 383 DGDEKLLVYEFMPNSSLDAILFGMRFS 409
GDE +V EF+ +L I+ R +
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMN 168
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 383 DGDEKLLVYEFM 394
++ EFM
Sbjct: 287 REPPFYIITEFM 298
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 81
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 109
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 301 AQDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEF 359
A D + + + + + + LG G +G VY+GV VAV+ L + + EF
Sbjct: 2 AMDPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EF 60
Query: 360 TNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
E ++ +++H NLV+LLG C ++ EFM +L
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 100
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 85 REPPFYIIIEFMTYGNL 101
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 68
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 69 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 96
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 133
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 85 REPPFYIITEFMTYGNL 101
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 99
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 101
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 106
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 102
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 99
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 102
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 96
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 124
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 99
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 102
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 77
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 105
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 101
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 80 REPPFYIITEFMTYGNL 96
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +LG G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 106
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 80 REPPFYIITEFMTYGNL 96
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLS--DGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E M N SLD+ L F+ I
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 85 REPPFYIITEFMTYGNL 101
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDL 117
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 383 DGDEKLLVYEFM 394
++ EFM
Sbjct: 326 REPPFYIITEFM 337
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDL 119
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 80 REPPFYIIIEFMTYGNL 96
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDL 118
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDL 119
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDL 120
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 80 REPPFYIIIEFMTYGNL 96
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDL 119
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLS--DGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 74
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E M N SLD+ L F+ I
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 118
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDL 124
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDL 178
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 81 REPPFYIIIEFMTYGNL 97
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 383 DGDEKLLVYEFM 394
++ EFM
Sbjct: 284 REPPFYIITEFM 295
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDL 114
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDL 138
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDL 119
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDL 117
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDL 116
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 82 REPPFYIITEFMTYGNL 98
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLV 375
+++D+ ++G G FG VY+ L D G+ VA++++ QG A E+ ++ KL H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIV 76
Query: 376 KLLGFCVDGDEKL------LVYEFMPNS 397
+L F EK LV +++P +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPET 104
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDL 111
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 82 REPPFYIITEFMTYGNL 98
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDL 137
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 80 REPPFYIITEFMTYGNL 96
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLV 375
+++D+ ++G G FG VY+ L D G+ VA++++ QG A E+ ++ KL H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIV 76
Query: 376 KLLGFCVDGDEKL------LVYEFMPNS 397
+L F EK LV +++P +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPET 104
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 80 REPPFYIITEFMTYGNL 96
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 82 REPPFYIITEFMTYGNL 98
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 85 REPPFYIITEFMTYGNL 101
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDL 120
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 315 SNNFSDSNMLGQGGFGPVYKG--VLSDGKE--VAVERLS-SCSEQGNAEFTNEVLLILKL 369
+ N S ++G G FG V G L KE VA++ L +E+ +F E ++ +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
H N+++L G ++V E M N SLD+ L F+ I
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 85 REPPFYIITEFMTYGNL 101
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 81 REPPFYIITEFMTYGNL 97
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 321 SNMLGQGGFGPVYKGVL--SDGKEV--AVERLSSCSEQGN-AEFTNEVLLILKLQHKNLV 375
+ ++G+G FG VY G L +DGK++ AV+ L+ ++ G ++F E +++ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 376 KLLGFCVDGD-EKLLVYEFMPNSSL 399
LLG C+ + L+V +M + L
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDL 118
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 322 NMLGQGGFGPVYKGVLS-DGKE---VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVK 376
++G G FG V G L GK VA++ L S +E+ +F +E ++ + H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAIL 403
L G +++ EFM N SLD+ L
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFL 99
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 293 LGRDDDLKAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVL--SDGK--EVAVERL 348
LG D+LK + LE + + F+ MLG+G FG V + L DG +VAV+ L
Sbjct: 5 LGISDELKEK-----LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML 59
Query: 349 SS--CSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEK------LLVYEFMPNSSLD 400
+ + EF E + + H ++ KL+G + K +++ FM + L
Sbjct: 60 KADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLH 119
Query: 401 AILFGMRFSFSFIIVPLNS 419
A L R + +PL +
Sbjct: 120 AFLLASRIGENPFNLPLQT 138
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G +G VY+GV VAV+ L + + EF E ++ +++H NLV+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 383 DGDEKLLVYEFMPNSSL 399
++ EFM +L
Sbjct: 93 REPPFYIITEFMTYGNL 109
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 321 SNMLGQGGFGPVYKGVLS-DGKE---VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLV 375
++G G FG V G L GK VA++ L S +E+ +F +E ++ + H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
L G +++ EFM N SLD+ L
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFL 125
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 308 LETLHVASNNFSDSNMLGQGGFGPVYKGVL--SDGK--EVAVE--RLSSCSEQGNAEFTN 361
LE + + N +LG+G FG V +G L DG +VAV+ +L + S++ EF +
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 362 EVLLILKLQHKNLVKLLGFCVDGDEK-----LLVYEFMPNSSLDAILFGMRFSFSFIIVP 416
E + H N+++LLG C++ + +++ FM L L R +P
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 417 LNS 419
L +
Sbjct: 146 LQT 148
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G ++ +VAV+ L + A F E L+ LQH LV+L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ EFM SL
Sbjct: 79 EEPIYIITEFMAKGSL 94
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLV 375
+++D+ ++G G FG VY+ L D G+ VA++++ QG A E+ ++ KL H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIV 76
Query: 376 KLLGFCVDGDEK 387
+L F EK
Sbjct: 77 RLRYFFYSSGEK 88
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 324 LGQGGFGPVYKGVLSD------GKEVAVERLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 376
LGQG FG VY+G D VAV+ ++ S S + EF NE ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
LLG G L+V E M + L + L +R
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR 115
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 324 LGQGGFGPVYKGVLSD------GKEVAVERLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 376
LGQG FG VY+G D VAV+ ++ S S + EF NE ++ ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
LLG G L+V E M + L + L +R
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR 116
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 324 LGQGGFGPVYKGVLSD------GKEVAVERLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 376
LGQG FG VY+G D VAV+ ++ S S + EF NE ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
LLG G L+V E M + L + L +R
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR 115
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 324 LGQGGFGPVYKGVLSD------GKEVAVERLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 376
LGQG FG VY+G D VAV+ ++ S S + EF NE ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
LLG G L+V E M + L + L +R
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR 115
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 324 LGQGGFGPVYKGVLSD------GKEVAVERLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 376
LGQG FG VY+G D VAV+ ++ S S + EF NE ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
LLG G L+V E M + L + L +R
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR 115
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 35/151 (23%)
Query: 322 NMLGQGGFGPVYKGVLSDGKEVAV-ERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 380
+LG+G FG K + EV V + L E+ F EV ++ L+H N++K +G
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 381 CVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXXXXXXXXPRKRGL 440
+ E++ +L I+ M +
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYP----------------------------- 106
Query: 441 LCWSKRITIVNGIAKGILYVHEDSRLRIIHR 471
WS+R++ IA G+ Y+H + IIHR
Sbjct: 107 --WSQRVSFAKDIASGMAYLHS---MNIIHR 132
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 79 QEPIYIITEYMENGSL 94
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 84
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 85 QEPIYIITEYMENGSL 100
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 79 QEPIYIITEYMENGSL 94
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 73
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 74 QEPIYIITEYMENGSL 89
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 83
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 84 QEPIYIITEYMENGSL 99
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 79
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 80 QEPIYIITEYMENGSL 95
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 88
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 89 QEPIYIITEYMENGSL 104
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 79 QEPIYIITEYMENGSL 94
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 324 LGQGGFGPVYKGVLSD------GKEVAVERLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 376
LGQG FG VY+G D VAV+ ++ S S + EF NE ++ ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
LLG G L+V E M + L + L +R
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR 112
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 84
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 85 QEPIYIITEYMENGSL 100
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 80
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 81 QEPIYIITEYMENGSL 96
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 74
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 75 QEPIYIITEYMENGSL 90
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 324 LGQGGFGPVYKGVLSD------GKEVAVERLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 376
LGQG FG VY+G D VAV+ ++ S S + EF NE ++ ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
LLG G L+V E M + L + L +R
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR 114
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 86
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 87 QEPIYIITEYMENGSL 102
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 87
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 88 QEPIYIITEYMENGSL 103
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 324 LGQGGFGPVYKGVLSD------GKEVAVERLS-SCSEQGNAEFTNEVLLILKLQHKNLVK 376
LGQG FG VY+G D VAV+ ++ S S + EF NE ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
LLG G L+V E M + L + L +R
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLR 115
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKG 271
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKG 271
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 331
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKG 354
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
+GQG G VY + ++ G+EVA+ +++ + NE+L++ + ++ N+V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 383 DGDEKLLVYEFMPNSSLDAIL 403
GDE +V E++ SL ++
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV 108
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G FG VYK + G A + + + SE+ ++ E+ ++ H +VKLLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 383 DGDEKLLVYEFMPNSSLDAILFGM 406
+ ++ EF P ++DAI+ +
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLEL 110
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
+GQG G VY + ++ G+EVA+ +++ + NE+L++ + ++ N+V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 383 DGDEKLLVYEFMPNSSLDAIL 403
GDE +V E++ SL ++
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV 108
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
+GQG G VY + ++ G+EVA+ +++ + NE+L++ + ++ N+V L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 383 DGDEKLLVYEFMPNSSLDAIL 403
GDE +V E++ SL ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV 109
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
+GQG G VY + ++ G+EVA+ +++ + NE+L++ + ++ N+V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 383 DGDEKLLVYEFMPNSSLDAIL 403
GDE +V E++ SL ++
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV 108
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 309 ETLHVASNNFSDSNMLGQGGFGPVYKGV-LSDGKE-----VAVERLSSCSEQGNAE-FTN 361
E NN LG G FG V + GKE VAV+ L S + E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 362 EVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEF 393
E+ ++ L QH+N+V LLG C G L++ E+
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
+GQG G VY + ++ G+EVA+ +++ + NE+L++ + ++ N+V L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 383 DGDEKLLVYEFMPNSSLDAIL 403
GDE +V E++ SL ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV 109
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 309 ETLHVASNNFSDSNMLGQGGFGPVYKGV-LSDGKE-----VAVERLSSCSEQGNAE-FTN 361
E NN LG G FG V + GKE VAV+ L S + E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 362 EVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEF 393
E+ ++ L QH+N+V LLG C G L++ E+
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 324 LGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G FG VYK + G A + + + SE+ ++ E+ ++ H +VKLLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 383 DGDEKLLVYEFMPNSSLDAILFGM 406
+ ++ EF P ++DAI+ +
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLEL 102
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNE--VLLILKLQHKN 373
+N ++G+G +G VYKG L D + VAV+ S + Q F NE + + ++H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 374 LVKLL----GFCVDGD-EKLLVYEFMPNSSLDAIL 403
+ + + DG E LLV E+ PN SL L
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL 103
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKL 369
V NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFM 394
H N+VKLL ++ LV+EF+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL 88
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 307 DLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLI 366
D + + + LG G FG V+ G ++ +VAV+ L + A F E L+
Sbjct: 4 DKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLM 62
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
LQH LV+L + ++ E+M SL
Sbjct: 63 KTLQHDKLVRLYAVVTREEPIYIITEYMAKGSL 95
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +L G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L++ + MP
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLIM-QLMP 106
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 75
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKG 98
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKG 105
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 309 ETLHVASNNFSDSNMLGQGGFGPVYKGV-LSDGKE-----VAVERLSSCSEQGNAE-FTN 361
E NN LG G FG V + GKE VAV+ L S + E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 362 EVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEF 393
E+ ++ L QH+N+V LLG C G L++ E+
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 71
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKG 94
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKG 271
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKG 105
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKG 105
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 73
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKG 96
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKG 105
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 249
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKG 272
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 309 ETLHVASNNFSDSNMLGQGGFGPVYKGV-LSDGKE-----VAVERLSSCSEQGNAE-FTN 361
E NN LG G FG V + GKE VAV+ L S + E +
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 90
Query: 362 EVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEF 393
E+ ++ L QH+N+V LLG C G L++ E+
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 123
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 320 DSNMLGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
D +LG+G +G VY G LS+ +A++ + + + E+ L L+HKN+V+ L
Sbjct: 12 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 379 G-FCVDGDEKLLVYEFMPNSSLDAIL 403
G F +G K+ + E +P SL A+L
Sbjct: 72 GSFSENGFIKIFM-EQVPGGSLSALL 96
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 72
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKG 95
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 309 ETLHVASNNFSDSNMLGQGGFGPVYKGV-LSDGKE-----VAVERLSSCSEQGNAE-FTN 361
E NN LG G FG V + GKE VAV+ L S + E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 362 EVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEF 393
E+ ++ L QH+N+V LLG C G L++ E+
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +L G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 99
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|3A2E|A Chain A, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal
Protein From Ginkgo Biloba Seeds
pdb|3A2E|B Chain B, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal
Protein From Ginkgo Biloba Seeds
pdb|3A2E|C Chain C, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal
Protein From Ginkgo Biloba Seeds
pdb|3A2E|D Chain D, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal
Protein From Ginkgo Biloba Seeds
Length = 108
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 194 TLYALVQCTKDLSADDCDACLNKAIADILSCCYFSRGARLLSRSCYLRYELYAF 247
T Y C + +S DC ACL+ + I S C + GAR+ C+++YE +F
Sbjct: 55 TAYGRATCKQSISQSDCTACLSNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF 108
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Query: 49 PIYRNLKKVVISLALNASAA----KFSDASSGNDSDRVYGLYTCLNYISNDTCNNLITTA 104
P RNL+ ++ L N + + K S A SG + YG TC IS C ++
Sbjct: 20 PFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGG-APTAYGRATCKQSISQSDCTACLSNL 78
Query: 105 TQDITKLCPNKTDAIVWEEVCQLRYAYGNF 134
I +C N A V C ++Y +F
Sbjct: 79 VNRIFSICNNAIGARVQLVDCFIQYEQRSF 108
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 309 ETLHVASNNFSDSNMLGQGGFGPVYKGV-LSDGKE-----VAVERLSSCSEQGNAE-FTN 361
E NN LG G FG V + GKE VAV+ L S + E +
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 362 EVLLILKL-QHKNLVKLLGFCVDGDEKLLVYEF 393
E+ ++ L QH+N+V LLG C G L++ E+
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 116
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL 86
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 373 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPL 417
N+VKLL ++ LV+EF+ S+D F + + I +PL
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPL 107
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL 86
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 373 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPL 417
N+VKLL ++ LV+EF+ S+D F + + I +PL
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPL 105
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 320 DSNMLGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLL 378
D +LG+G +G VY G LS+ +A++ + + + E+ L L+HKN+V+ L
Sbjct: 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 379 G-FCVDGDEKLLVYEFMPNSSLDAIL 403
G F +G K+ + E +P SL A+L
Sbjct: 86 GSFSENGFIKIFM-EQVPGGSLSALL 110
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL 85
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL 86
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL 85
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 313 VASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNAEFTNEVLLI 366
+ F +L G FG VYKG+ + +G++V + E + S + N E +E ++
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 367 LKLQHKNLVKLLGFCVDGDEKLLVYEFMP 395
+ + ++ +LLG C+ +L+ + MP
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLIT-QLMP 106
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL 85
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL 87
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL 87
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL 87
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL 86
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL 85
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL 91
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL 88
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKG 102
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKG 102
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL 91
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL 87
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 322 NMLGQGGFGPVYKGV-LSDGKEVAVERLSSCSE--QGNAEF---TNEVLLILKLQHKNLV 375
+LG G FG V+KGV + +G+ + + E G F T+ +L I L H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSL 399
+LLG C G LV +++P SL
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSL 101
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 295 RDDDLKAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAVERLSSCSE 353
+D D+ F D E L FSD +G G FG VY + + + VA++++S +
Sbjct: 39 KDPDVAELFFKDDPEKL------FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK 92
Query: 354 QGNAEFTN---EVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAI 402
Q N ++ + EV + KL+H N ++ G + LV E+ S+ D +
Sbjct: 93 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLL 144
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKG 105
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 310 TLHVASNNFSDSNMLGQGGFGPVYKGVLS-DGKE---VAVERLSSC-SEQGNAEFTNEVL 364
T + ++ ++G G G V G L G+ VA++ L + +E+ +F +E
Sbjct: 43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
++ + H N+++L G G ++V E+M N SLD L
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 310 TLHVASNNFSDSNMLGQGGFGPVYKGVLS-DGKE---VAVERLSSC-SEQGNAEFTNEVL 364
T + ++ ++G G G V G L G+ VA++ L + +E+ +F +E
Sbjct: 43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
++ + H N+++L G G ++V E+M N SLD L
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA+ RL + +E + E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA+ RL + +E + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 373 NLVKLLGFCVDGDEKLLVYEFM 394
N+VKLL ++ LV+EF+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 322 NMLGQGGFGPVYKGV-LSDGKEVAVERLSSCSE--QGNAEF---TNEVLLILKLQHKNLV 375
+LG G FG V+KGV + +G+ + + E G F T+ +L I L H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSL 399
+LLG C G LV +++P SL
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSL 119
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ K++H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQL--YAVV 82
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M SL L G
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKG 105
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 321 SNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 380
++G+G FG V K K+VA++++ S SE+ F E+ + ++ H N+VKL G
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 381 CVDGDEKLLVYEFMPNSSLDAILFG 405
C+ + LV E+ SL +L G
Sbjct: 71 CL--NPVCLVMEYAEGGSLYNVLHG 93
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 80
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 109
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 103
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 132
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLS-DGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLV 375
+F + ++G GGFG V+K DGK + R+ +E+ EV + KL H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIV 68
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSLDAI 402
G C DG +++ P +S D++
Sbjct: 69 HYNG-CWDG------FDYDPETSDDSL 88
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 109
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 138
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 109
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 138
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 309 ETLHVAS-NNFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAE--FTNEVL 364
E L+ S + + ++G+G +G V K D G+ VA+++ + + E+
Sbjct: 17 ENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK 76
Query: 365 LILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAI 402
L+ +L+H+NLV LL C LV+EF+ ++ LD +
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL 114
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 321 SNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 380
++G+G FG V K K+VA++++ S SE+ F E+ + ++ H N+VKL G
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 381 CVDGDEKLLVYEFMPNSSLDAILFG 405
C+ + LV E+ SL +L G
Sbjct: 70 CL--NPVCLVMEYAEGGSLYNVLHG 92
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 316 NNFSDSNMLGQGGFGPVYKG-VLSDG--KEVAVERLSS-CSEQGNAEFTNEVLLILKL-Q 370
N+ +++G+G FG V K + DG + A++R+ S+ + +F E+ ++ KL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
H N++ LLG C L E+ P+ +L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNL 103
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 324 LGQGGFGPVYKGVL------SDGKEVAVERLSSCSEQG-NAEFTNEVLLILKLQHKNLVK 376
LG+ FG VYKG L + VA++ L +E EF +E +L +LQH N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAIL 403
LLG +++ + + L L
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFL 120
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 111
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 140
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 87
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 116
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 316 NNFSDSNMLGQGGFGPVYKG-VLSDG--KEVAVERLSS-CSEQGNAEFTNEVLLILKL-Q 370
N+ +++G+G FG V K + DG + A++R+ S+ + +F E+ ++ KL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
H N++ LLG C L E+ P+ +L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNL 113
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 324 LGQGGFGPVYKGVL------SDGKEVAVERLSSCSEQG-NAEFTNEVLLILKLQHKNLVK 376
LG+ FG VYKG L + VA++ L +E EF +E +L +LQH N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 377 LLGFCVDGDEKLLVYEFMPNSSLDAIL 403
LLG +++ + + L L
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFL 103
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 83
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 112
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 75
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 321 SNMLGQGGFGPVYKGVLS-DGKE---VAVERLS-SCSEQGNAEFTNEVLLILKLQHKNLV 375
++G G FG V G L GK VA++ L +E+ +F E ++ + H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
L G ++V E+M N SLD L
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFL 114
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 113
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 142
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 94
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 123
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 87
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 116
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 316 NNFSDSNMLGQGGFGPVYKG-VLSDG--KEVAVERLSS-CSEQGNAEFTNEVLLILKL-Q 370
N+ +++G+G FG V K + DG + A++R+ S+ + +F E+ ++ KL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
H N++ LLG C L E+ P+ +L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNL 110
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 88
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 117
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 75
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 154
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 183
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 75
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPET 104
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 75
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 296 DDDLKAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQ 354
D D+ F D E L FSD +G G FG VY + + + VA++++S +Q
Sbjct: 1 DPDVAELFFKDDPEKL------FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ 54
Query: 355 GNAEFTN---EVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAI 402
N ++ + EV + KL+H N ++ G + LV E+ S+ D +
Sbjct: 55 SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLL 105
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 76
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 105
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 373 NLVKLLGFCVDGDEKLLVYE--------FMPNSSLDAILFGMRFSFSF 412
N+VKLL ++ LV+E FM S+L I + S+ F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLF 109
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLIL-KLQHKNL 374
+++D+ ++G G FG VY+ L D G+ VA++++ + F N L I+ KL H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 79
Query: 375 VKLLGFCVDGDEKL------LVYEFMPNS 397
V+L F EK LV +++P +
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPET 108
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M L L G
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKG 105
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHK 372
NF +G+G +G VYK G+ VA++ RL + +E + E+ L+ +L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 373 NLVKLLGFCVDGDEKLLVYE--------FMPNSSLDAILFGMRFSFSF 412
N+VKLL ++ LV+E FM S+L I + S+ F
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLF 113
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 324 LGQGGFGPVY------KGVLSDGKEVAVERLSSCSEQGN--AEFTNEVLLILKLQHKNLV 375
LG+G FG V +G + G++VAV+ L S GN A+ E+ ++ L H+N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGD-NTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIV 86
Query: 376 KLLGFCVD--GDEKLLVYEFMPNSSLDAIL 403
K G C + G+ L+ EF+P+ SL L
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYL 116
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 321 SNMLGQGGFGPVYKGVLS-DGKE---VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLV 375
++G G FG V G L GK VA++ L + +++ +F +E ++ + H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
L G +++ E+M N SLDA L
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFL 121
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 321 SNMLGQGGFGPVYKGVLS-DGKE---VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLV 375
++G G FG V G L GK VA++ L + +++ +F +E ++ + H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
L G +++ E+M N SLDA L
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFL 106
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 321 SNMLGQGGFGPVYKGVLS-DGKE---VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLV 375
++G G FG V G L GK VA++ L + +++ +F +E ++ + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 376 KLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
L G +++ E+M N SLDA L
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFL 100
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 324 LGQGGFGPVYKGVLSDGKE-VAVERLSSCSEQGNAEFT--NEVLLILKLQHKNLVKLLGF 380
LG+G +G VYK + + E VA++R+ E+ T EV L+ +LQH+N+++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 381 CVDGDEKLLVYEFMPN 396
L++E+ N
Sbjct: 102 IHHNHRLHLIFEYAEN 117
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFT--NEVLLILKLQHKNLVKLLGFC 381
+G+G +G VYK S G+ VA++R+ +E T E+ L+ +L H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 382 VDGDEKLLVYEFM 394
LV+EFM
Sbjct: 89 HSERCLTLVFEFM 101
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFT--NEVLLILKLQHKNLVKLLGFC 381
+G+G +G VYK S G+ VA++R+ +E T E+ L+ +L H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 382 VDGDEKLLVYEFM 394
LV+EFM
Sbjct: 89 HSERCLTLVFEFM 101
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 324 LGQGGFGPVY------KGVLSDGKEVAVERLSSCSEQGN--AEFTNEVLLILKLQHKNLV 375
LG+G FG V +G + G++VAV+ L S GN A+ E+ ++ L H+N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGD-NTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIV 74
Query: 376 KLLGFCVD--GDEKLLVYEFMPNSSLDAIL 403
K G C + G+ L+ EF+P+ SL L
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYL 104
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LGQG FG V+ G + VA++ L + A F E ++ KL+H+ LV+L + V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 384 GDEKL-LVYEFMPNSSLDAILFG 405
+E + +V E+M L L G
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKG 105
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 340 GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
GK+VAV+++ +Q NEV+++ H N+V + + GDE +V EF+ +L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 400 DAILFGMRFS 409
I+ R +
Sbjct: 130 TDIVTHTRMN 139
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 321 SNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 380
S +G G FG VYKG V + ++ + + F NEV ++ K +H N++ +G+
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 381 CVDGDEKLLVYEFMPNSSL 399
D +V ++ SSL
Sbjct: 101 MTK-DNLAIVTQWCEGSSL 118
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G G V+ G + +VAV+ L S +A F E L+ +LQH+ LV+L V
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 384 GDEKLLVYEFMPNSSL 399
+ ++ E+M N SL
Sbjct: 79 QEPIYIITEYMENGSL 94
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V G +VAV+ + S EF E ++KL H LVK G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 384 GDEKLLVYEFMPNSSL 399
+V E++ N L
Sbjct: 75 EYPIYIVTEYISNGCL 90
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 322 NMLGQGGFGPVYKGVL-SDGKEVAVERLSSCSE----QGNAEFTNEVLLILKLQHKNLVK 376
+G+G FG V+ G L +D VAV+ SC E A+F E ++ + H N+V+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVK---SCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 377 LLGFCVDGDEKLLVYEFM 394
L+G C +V E +
Sbjct: 177 LIGVCTQKQPIYIVMELV 194
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 322 NMLGQGGFGPVYKGVL-SDGKEVAVERLSSCSE----QGNAEFTNEVLLILKLQHKNLVK 376
+G+G FG V+ G L +D VAV+ SC E A+F E ++ + H N+V+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVK---SCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 377 LLGFCVDGDEKLLVYEFM 394
L+G C +V E +
Sbjct: 177 LIGVCTQKQPIYIVMELV 194
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 14/87 (16%)
Query: 324 LGQGGFG--------PVYKGVLSDGKEVAVERLSS-CSEQGNAEFTNEVLLILKLQHKNL 374
LG+G FG P G G+ VAV+ L + C Q + + E+ ++ L H+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 375 VKLLGFCVDGDEK--LLVYEFMPNSSL 399
+K G C D EK LV E++P SL
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSL 105
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 14/87 (16%)
Query: 324 LGQGGFG--------PVYKGVLSDGKEVAVERLSS-CSEQGNAEFTNEVLLILKLQHKNL 374
LG+G FG P G G+ VAV+ L + C Q + + E+ ++ L H+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 375 VKLLGFCVDGDEK--LLVYEFMPNSSL 399
+K G C D EK LV E++P SL
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSL 105
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 322 NMLGQGGFGPVYKGV-LSDGK----EVAVERL-SSCSEQGNAEFTNEVLLILKLQHKNLV 375
+LG G FG VYKG+ + DG+ VA++ L + S + N E +E ++ + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 376 KLLGFCVDGDEKLLVYEFMP 395
+LLG C+ + LV + MP
Sbjct: 83 RLLGICLTSTVQ-LVTQLMP 101
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 317 NFSDSNMLGQGGFGPVYKGVLS-DGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLV 375
+F + ++G GGFG V+K DGK ++R+ +E+ EV + KL H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----REVKALAKLDHVNIV 67
Query: 376 KLLGFCVDGDEKLLVYEFMPNSS 398
G C DG +++ P +S
Sbjct: 68 HYNG-CWDG------FDYDPETS 83
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 324 LGQGGFG--------PVYKGVLSDGKEVAVERLSS-CSEQGNAEFTNEVLLILKLQHKNL 374
LG+G FG P G G+ VAV+ L C Q + + E+ ++ L H+++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 375 VKLLGFCVDGDEK--LLVYEFMPNSSL 399
VK G C D EK LV E++P SL
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSL 99
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 324 LGQGGFG--------PVYKGVLSDGKEVAVERLSS-CSEQGNAEFTNEVLLILKLQHKNL 374
LG+G FG P G G+ VAV+ L C Q + + E+ ++ L H+++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 375 VKLLGFCVDGDEK--LLVYEFMPNSSL 399
VK G C D EK LV E++P SL
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSL 100
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 35/148 (23%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 74
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXXXXXXXXPRKRGLLCW 443
+ +V ++ SSL L + F I
Sbjct: 75 APQLAIVTQWCEGSSLYHHLHIIETKFEMI------------------------------ 104
Query: 444 SKRITIVNGIAKGILYVHEDSRLRIIHR 471
K I I A+G+ Y+H S IIHR
Sbjct: 105 -KLIDIARQTAQGMDYLHAKS---IIHR 128
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 318 FSDSNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKL-QHKNLVK 376
+++ ++G G FG V++ L + EVA++++ + F N L I+++ +H N+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVD 96
Query: 377 LLGFCV-DGDEK-----LLVYEFMPNS 397
L F +GD+K LV E++P +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPET 123
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 35/148 (23%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXXXXXXXXPRKRGLLCW 443
+ +V ++ SSL L + F I
Sbjct: 96 -PQLAIVTQWCEGSSLYHHLHIIETKFEMI------------------------------ 124
Query: 444 SKRITIVNGIAKGILYVHEDSRLRIIHR 471
K I I A+G+ Y+H S IIHR
Sbjct: 125 -KLIDIARQTAQGMDYLHAKS---IIHR 148
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 35/148 (23%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXXXXXXXXPRKRGLLCW 443
+ +V ++ SSL L + F I
Sbjct: 104 -PQLAIVTQWCEGSSLYHHLHIIETKFEMI------------------------------ 132
Query: 444 SKRITIVNGIAKGILYVHEDSRLRIIHR 471
K I I A+G+ Y+H S IIHR
Sbjct: 133 -KLIDIARQTAQGMDYLHAKS---IIHR 156
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 35/148 (23%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXXXXXXXXPRKRGLLCW 443
+ +V ++ SSL L + F I
Sbjct: 103 -PQLAIVTQWCEGSSLYHHLHIIETKFEMI------------------------------ 131
Query: 444 SKRITIVNGIAKGILYVHEDSRLRIIHR 471
K I I A+G+ Y+H S IIHR
Sbjct: 132 -KLIDIARQTAQGMDYLHAKS---IIHR 155
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 35/148 (23%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXXXXXXXXPRKRGLLCW 443
+ +V ++ SSL L + F I
Sbjct: 81 -PQLAIVTQWCEGSSLYHHLHIIETKFEMI------------------------------ 109
Query: 444 SKRITIVNGIAKGILYVHEDSRLRIIHR 471
K I I A+G+ Y+H S IIHR
Sbjct: 110 -KLIDIARQTAQGMDYLHAKS---IIHR 133
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 35/148 (23%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXXXXXXXXPRKRGLLCW 443
+ +V ++ SSL L + F I
Sbjct: 81 -PQLAIVTQWCEGSSLYHHLHIIETKFEMI------------------------------ 109
Query: 444 SKRITIVNGIAKGILYVHEDSRLRIIHR 471
K I I A+G+ Y+H S IIHR
Sbjct: 110 -KLIDIARQTAQGMDYLHAKS---IIHR 133
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 35/148 (23%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXXXXXXXXPRKRGLLCW 443
+ +V ++ SSL L + F I
Sbjct: 78 -PQLAIVTQWCEGSSLYHHLHIIETKFEMI------------------------------ 106
Query: 444 SKRITIVNGIAKGILYVHEDSRLRIIHR 471
K I I A+G+ Y+H S IIHR
Sbjct: 107 -KLIDIARQTAQGMDYLHAKS---IIHR 130
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFSFI 413
+ +V ++ SSL L + F I
Sbjct: 104 -PQLAIVTQWCEGSSLYHHLHIIETKFEMI 132
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 35/148 (23%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXXXXXXXXPRKRGLLCW 443
+ +V ++ SSL L + F I
Sbjct: 76 -PQLAIVTQWCEGSSLYHHLHIIETKFEMI------------------------------ 104
Query: 444 SKRITIVNGIAKGILYVHEDSRLRIIHR 471
K I I A+G+ Y+H S IIHR
Sbjct: 105 -KLIDIARQTAQGMDYLHAKS---IIHR 128
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 323 MLGQGGFGPVYK---GVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLG 379
MLG+G FG V K + V V +S + + EV L+ KL H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 380 FCVDGDEKLLVYEFMPNSSL-DAILFGMRFS 409
D +V E L D I+ RFS
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 323 MLGQGGFGPVYK---GVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLG 379
MLG+G FG V K + V V +S + + EV L+ KL H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 380 FCVDGDEKLLVYEFMPNSSL-DAILFGMRFS 409
D +V E L D I+ RFS
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 384 GDEKLLVYEFMPNSSL 399
+ +V ++ SSL
Sbjct: 91 APQLAIVTQWCEGSSL 106
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 35/148 (23%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 384 GDEKLLVYEFMPNSSLDAILFGMRFSFSFIIVPLNSQNXXXXXXXXXXXXXPRKRGLLCW 443
+ +V ++ SSL L + F I
Sbjct: 76 -PQLAIVTQWCEGSSLYHHLHIIETKFEMI------------------------------ 104
Query: 444 SKRITIVNGIAKGILYVHEDSRLRIIHR 471
K I I A+G+ Y+H S IIHR
Sbjct: 105 -KLIDIARQTAQGMDYLHAKS---IIHR 128
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 384 GDEKLLVYEFMPNSSL 399
+ +V ++ SSL
Sbjct: 80 -PQLAIVTQWCEGSSL 94
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG G FG V+ G + +VA++ L + + F E ++ KL+H LV+L + V
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQL--YAVV 73
Query: 384 GDEKL-LVYEFMPNSSL 399
+E + +V E+M SL
Sbjct: 74 SEEPIYIVTEYMNKGSL 90
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 323 MLGQGGFGPVYK---GVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLG 379
MLG+G FG V K + V V +S + + EV L+ KL H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 380 FCVDGDEKLLVYEFMPNSSL-DAILFGMRFS 409
D +V E L D I+ RFS
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G G FG VYKG V + +++ + Q F NEV ++ K +H N++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 384 GDEKLLVYEFMPNSSL 399
+ +V ++ SSL
Sbjct: 92 -PQLAIVTQWCEGSSL 106
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
Query: 288 HYQHVLGRDDDLKAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEVAVER 347
Y+HV DL +DF+ E + LG G FG VYK + +A +
Sbjct: 25 QYEHVTR---DLNPEDFW---EII----------GELGDGAFGKVYKAQNKETSVLAAAK 68
Query: 348 -LSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGM 406
+ + SE+ ++ E+ ++ H N+VKLL + ++ EF ++DA++ +
Sbjct: 69 VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL 128
Query: 407 R 407
Sbjct: 129 E 129
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
Query: 288 HYQHVLGRDDDLKAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEVAVER 347
Y+HV DL +DF+ E + LG G FG VYK + +A +
Sbjct: 25 QYEHVTR---DLNPEDFW---EII----------GELGDGAFGKVYKAQNKETSVLAAAK 68
Query: 348 -LSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGM 406
+ + SE+ ++ E+ ++ H N+VKLL + ++ EF ++DA++ +
Sbjct: 69 VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL 128
Query: 407 R 407
Sbjct: 129 E 129
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
Query: 288 HYQHVLGRDDDLKAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEVAVER 347
Y+HV DL +DF+ E + LG G FG VYK + +A +
Sbjct: 25 QYEHVTR---DLNPEDFW---EII----------GELGDGAFGKVYKAQNKETSVLAAAK 68
Query: 348 -LSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGM 406
+ + SE+ ++ E+ ++ H N+VKLL + ++ EF ++DA++ +
Sbjct: 69 VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL 128
Query: 407 R 407
Sbjct: 129 E 129
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 307 DLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKE----VAVERL--SSCSEQG-NAEF 359
D+ T H ++F LG+G FG VY L+ K+ VA++ L S ++G +
Sbjct: 14 DILTRHFTIDDFEIGRPLGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQL 70
Query: 360 TNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
E+ + L H N+++L + D L+ E+ P L
Sbjct: 71 RREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL 110
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSC---SEQGNAEFTNEVLLILKLQHKNLVKLLGF 380
+G G FG V++ G +VAV+ L +E+ N EF EV ++ +L+H N+V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIVLFMGA 102
Query: 381 CVDGDEKLLVYEFMPNSSLDAIL 403
+V E++ SL +L
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLL 125
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSC---SEQGNAEFTNEVLLILKLQHKNLVKLLGF 380
+G G FG V++ G +VAV+ L +E+ N EF EV ++ +L+H N+V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIVLFMGA 102
Query: 381 CVDGDEKLLVYEFMPNSSLDAIL 403
+V E++ SL +L
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLL 125
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 313 VASNNFSDSNMLGQGGFGPVY--KGVLSDGKEVAVERLS--SCSEQGNAE-FTNEVLLIL 367
+ S+ + +LG+G FG V K ++ G+E AV+ +S ++ + E EV L+
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 368 KLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFGMRFS 409
+L H N++KL F D LV E L D I+ RFS
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 130
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 340 GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
G++VAV+ + +Q NEV+++ QH N+V++ + G+E ++ EF+ +L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 400 DAILFGMRFS 409
I+ +R +
Sbjct: 130 TDIVSQVRLN 139
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G FG V++ + G A + + + E E+ + L+H LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 383 DGDEKLLVYEFMPNSSL 399
D +E +++YEFM L
Sbjct: 119 DDNEMVMIYEFMSGGEL 135
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G FG V++ + G A + + + E E+ + L+H LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 383 DGDEKLLVYEFMPNSSL 399
D +E +++YEFM L
Sbjct: 225 DDNEMVMIYEFMSGGEL 241
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 322 NMLGQGGFGPVYKGVLSDGKE----VAVERLSSCSEQGNAE-FTNEVLLILKLQHKNLVK 376
++G+G FG VY G D + A++ LS +E E F E LL+ L H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 377 LLGFCVDGD 385
L+G + +
Sbjct: 87 LIGIMLPPE 95
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 313 VASNNFSDSNMLGQGGFGPVY--KGVLSDGKEVAVERLS--SCSEQGNAE-FTNEVLLIL 367
+ S+ + +LG+G FG V K ++ G+E AV+ +S ++ + E EV L+
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 368 KLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFGMRFS 409
+L H N++KL F D LV E L D I+ RFS
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 124
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 313 VASNNFSDSNMLGQGGFGPVY--KGVLSDGKEVAVERLS--SCSEQGNAE-FTNEVLLIL 367
+ S+ + +LG+G FG V K ++ G+E AV+ +S ++ + E EV L+
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 368 KLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFGMRFS 409
+L H N+ KL F D LV E L D I+ RFS
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 124
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 317 NFSDSNMLGQGGFGPVYKG-VLSDGKEVAVERL--SSCSEQGNAE-FTNEVLLILKLQHK 372
+F N+LG+G F VY+ + G EVA++ + + + G + NEV + +L+H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 373 NLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
++++L + D + LV E N ++ L
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYL 102
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 313 VASNNFSDSNMLGQGGFGPVY--KGVLSDGKEVAVERLS--SCSEQGNAE-FTNEVLLIL 367
+ S+ + +LG+G FG V K ++ G+E AV+ +S ++ + E EV L+
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 368 KLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFGMRFS 409
+L H N++KL F D LV E L D I+ RFS
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 147
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 313 VASNNFSDSNMLGQGGFGPVY--KGVLSDGKEVAVERLS--SCSEQGNAE-FTNEVLLIL 367
+ S+ + +LG+G FG V K ++ G+E AV+ +S ++ + E EV L+
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 368 KLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL-DAILFGMRFS 409
+L H N++KL F D LV E L D I+ RFS
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 148
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 314 ASNNF---SDSNMLGQGGFGPVYK-GVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKL 369
A N+F S + +LG G FG V+K + G ++A + + + + E NE+ ++ +L
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 370 QHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
H NL++L ++ +LV E++ L
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 287 LHYQHVLGRDDDLKAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKE---- 342
L++Q +G +D+ I E + + +G+G FG V++G+ +
Sbjct: 20 LYFQGAMGSS----TRDYEIQRERIELG-------RCIGEGQFGDVHQGIYMSPENPALA 68
Query: 343 VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
VA++ +C S+ +F E L + + H ++VKL+G +
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE 110
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 300 KAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEF 359
KA I L+ + ++G+G FG VY G + + + +E F
Sbjct: 17 KASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAF 76
Query: 360 TNEVLLILKLQHKNLVKLLGFCV 382
EV+ + +H+N+V +G C+
Sbjct: 77 KREVMAYRQTRHENVVLFMGACM 99
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G+G FG V G G +VAV+ + + + F E ++ +L+H NLV+LLG V+
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 384 GDEKL-LVYEFMPNSSL 399
L +V E+M SL
Sbjct: 258 EKGGLYIVTEYMAKGSL 274
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 321 SNMLGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQ-HKNLVKLL 378
S +LG+G + V V L +GKE AV+ + + + EV + + Q +KN+++L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 379 GFCVDGDEKLLVYEFMPNSSLDA 401
F D LV+E + S+ A
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILA 100
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 324 LGQGGFGPVYKGVL----SDGKEVAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 378
+G+G FG V++G+ + VA++ +C S+ +F E L + + H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 379 GFCVDGDEKLLVYEFMPNSSLDAILFGMRFSF 410
G + + ++ E L + L +FS
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFSL 108
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 324 LGQGGFGPVYKGVL----SDGKEVAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 378
+G+G FG V++G+ + VA++ +C S+ +F E L + + H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 379 GFCVDGDEKLLVYEFMPNSSLDAILFGMRFSF 410
G + + ++ E L + L +FS
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFSL 108
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G+G FG V G G +VAV+ + + + F E ++ +L+H NLV+LLG V+
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 384 GDEKL-LVYEFMPNSSL 399
L +V E+M SL
Sbjct: 86 EKGGLYIVTEYMAKGSL 102
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 289 YQHVLGRDDDLKAQDFYIDLETLHVASNNFSDSNMLGQ-GGFGPVYKGVLSDGKEVAVER 347
Y+HV DL +DF+ ++G+ G FG VYK + +A +
Sbjct: 1 YEHVTR---DLNPEDFW----------------EIIGELGDFGKVYKAQNKETSVLAAAK 41
Query: 348 -LSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGM 406
+ + SE+ ++ E+ ++ H N+VKLL + ++ EF ++DA++ +
Sbjct: 42 VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL 101
Query: 407 R 407
Sbjct: 102 E 102
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G+G FG V G G +VAV+ + + + F E ++ +L+H NLV+LLG V+
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 384 GDEKL-LVYEFMPNSSL 399
L +V E+M SL
Sbjct: 71 EKGGLYIVTEYMAKGSL 87
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
+G+G FG V G G +VAV+ + + + F E ++ +L+H NLV+LLG V+
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 384 GDEKL-LVYEFMPNSSL 399
L +V E+M SL
Sbjct: 77 EKGGLYIVTEYMAKGSL 93
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 374 LVKLLGFCVDGDEKLLVYEFM 394
+++LL + D +L+ E M
Sbjct: 75 VIRLLDWFERPDSFVLILERM 95
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 324 LGQGGFGPVYKGVL----SDGKEVAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 378
+G+G FG V++G+ + VA++ +C S+ +F E L + + H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 379 GFCVD 383
G +
Sbjct: 78 GVITE 82
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAV---ERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 380
+G+G +G V+K + E+ RL E + E+ L+ +L+HKN+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD- 68
Query: 381 CVDGDEKL-LVYEF 393
+ D+KL LV+EF
Sbjct: 69 VLHSDKKLTLVFEF 82
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 324 LGQGGFGPVYKGVL----SDGKEVAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 378
+G+G FG V++G+ + VA++ +C S+ +F E L + + H ++VKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 379 GFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSF 412
G + + ++ E L + L +FS
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL 490
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 324 LGQGGFGPVYKGVL----SDGKEVAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 378
+G+G FG V++G+ + VA++ +C S+ +F E L + + H ++VKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 379 GFCVDGDEKLLVYEFMPNSSLDAILFGMRFSFSF 412
G + + ++ E L + L +FS
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL 490
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAV---ERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGF 380
+G+G +G V+K + E+ RL E + E+ L+ +L+HKN+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD- 68
Query: 381 CVDGDEKL-LVYEF 393
+ D+KL LV+EF
Sbjct: 69 VLHSDKKLTLVFEF 82
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 324 LGQGGFGPVYKGVLSDGKE----VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 378
+G+G FG V++G+ + VA++ +C S+ +F E L + + H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 379 GFCVD 383
G +
Sbjct: 78 GVITE 82
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 324 LGQGGFGPVYKGVLSDGKE----VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 378
+G+G FG V++G+ + VA++ +C S+ +F E L + + H ++VKL+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 379 GFCVD 383
G +
Sbjct: 80 GVITE 84
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 324 LGQGGFGPVYKGVLSDGKE----VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 378
+G+G FG V++G+ + VA++ +C S+ +F E L + + H ++VKL+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 379 GFCVD 383
G +
Sbjct: 75 GVITE 79
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 324 LGQGGFGPVYKGVLSDGKE----VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 378
+G+G FG V++G+ + VA++ +C S+ +F E L + + H ++VKL+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 379 GFCVD 383
G +
Sbjct: 81 GVITE 85
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFT--NEVLLILKLQHKNLVKLLGF 380
+GQG FG V+K G++VA++++ +E+ T E+ ++ L+H+N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 381 C 381
C
Sbjct: 86 C 86
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 316 NNFSDSNMLGQGGFGPV-----YKGVLSDGK-EVAVERLSSCSEQGNAEFTNEVLLILKL 369
N S LG G FG V Y + SD VAV+ L + E L +L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 370 --QHKNLVKLLGFCVDGDEKLLVYEF 393
H N+V LLG C G L++ E+
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEY 108
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 324 LGQGGFGPVYKGVLSDGKE----VAVERLSSC-SEQGNAEFTNEVLLILKLQHKNLVKLL 378
+G+G FG V++G+ + VA++ +C S+ +F E L + + H ++VKL+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 379 GFCVD 383
G +
Sbjct: 83 GVITE 87
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFT--NEVLLILKLQHKNLVKLLGF 380
+GQG FG V+K G++VA++++ +E+ T E+ ++ L+H+N+V L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 381 C 381
C
Sbjct: 85 C 85
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 316 NNFSDSNMLGQGGFGPV-----YKGVLSDGK-EVAVERLSSCSEQGNAEFTNEVLLILKL 369
N S LG G FG V Y + SD VAV+ L + E L +L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 370 --QHKNLVKLLGFCVDGDEKLLVYEF 393
H N+V LLG C G L++ E+
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEY 131
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 316 NNFSDSNMLGQGGFGPV-----YKGVLSDGK-EVAVERLSSCSEQGNAEFTNEVLLILKL 369
N S LG G FG V Y + SD VAV+ L + E L +L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 370 --QHKNLVKLLGFCVDGDEKLLVYEF 393
H N+V LLG C G L++ E+
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEY 131
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFT--NEVLLILKLQHKNLVKLLGF 380
+GQG FG V+K G++VA++++ +E+ T E+ ++ L+H+N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 381 C 381
C
Sbjct: 86 C 86
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 317 NFSDSNMLGQGGFGPVYKGV-LSDGKEVAVE-----RLSSCSEQGNAEFTNEVLLILKLQ 370
N+ LG+G FG V + G++VA++ L+ QG E E+ + L+
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
H +++KL DE ++V E+ N D I+
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 104
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 316 NNFSDSNMLGQGGFGPV-----YKGVLSDGK-EVAVERLSSCSEQGNAEFTNEVLLILKL 369
N S LG G FG V Y + SD VAV+ L + E L +L
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 370 --QHKNLVKLLGFCVDGDEKLLVYEF 393
H N+V LLG C G L++ E+
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEY 126
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFT--NEVLLILKLQHKNLVKLLGF 380
+GQG FG V+K G++VA++++ +E+ T E+ ++ L+H+N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 381 C 381
C
Sbjct: 86 C 86
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 316 NNFSDSNMLGQGGFGPV-----YKGVLSDGK-EVAVERLSSCSEQGNAEFTNEVLLILKL 369
N S LG G FG V Y + SD VAV+ L + E L +L
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 370 --QHKNLVKLLGFCVDGDEKLLVYEF 393
H N+V LLG C G L++ E+
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEY 124
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 317 NFSDSNMLGQGGFGPVYKGV-LSDGKEVAVE-----RLSSCSEQGNAEFTNEVLLILKLQ 370
N+ LG+G FG V + G++VA++ L+ QG E E+ + L+
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
H +++KL DE ++V E+ N D I+
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 95
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 317 NFSDSNMLGQGGFGPVYKGV-LSDGKEVAVE-----RLSSCSEQGNAEFTNEVLLILKLQ 370
N+ LG+G FG V + G++VA++ L+ QG E E+ + L+
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
H +++KL DE ++V E+ N D I+
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 99
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 317 NFSDSNMLGQGGFGPVYKGV-LSDGKEVAVE-----RLSSCSEQGNAEFTNEVLLILKLQ 370
N+ LG+G FG V + G++VA++ L+ QG E E+ + L+
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
H +++KL DE ++V E+ N D I+
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 105
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 321 SNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEF-TNEVLLILKLQHKNLVKLL 378
S++LGQG V++G G A++ ++ S + E ++ KL HKN+VKL
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL- 72
Query: 379 GFCVDGD----EKLLVYEFMPNSSLDAIL 403
F ++ + K+L+ EF P SL +L
Sbjct: 73 -FAIEEETTTRHKVLIMEFCPCGSLYTVL 100
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 17/124 (13%)
Query: 284 KTGLHYQHVLGRDDDLKAQDFYIDLET------LHVASNNFSDSNMLGQGGFGPVYK--- 334
++ L V G D+ + FY+D N +LG G FG V
Sbjct: 10 ESQLQMVQVTGSSDN---EYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATA 66
Query: 335 -GVLSDGK--EVAVERLSSCSEQGNAE-FTNEVLLILKL-QHKNLVKLLGFCVDGDEKLL 389
G+ G +VAV+ L ++ E +E+ ++ +L H+N+V LLG C L
Sbjct: 67 YGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYL 126
Query: 390 VYEF 393
++E+
Sbjct: 127 IFEY 130
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNL 374
+ + D LG GG G V+ V +D K VA++++ Q E+ +I +L H N+
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 375 VKL 377
VK+
Sbjct: 71 VKV 73
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 104 VIRLLDWFERPDSFVLILE 122
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 103 VIRLLDWFERPDSFVLILE 121
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 104 VIRLLDWFERPDSFVLILE 122
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 104 VIRLLDWFERPDSFVLILE 122
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 103 VIRLLDWFERPDSFVLILE 121
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 103 VIRLLDWFERPDSFVLILE 121
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 104 VIRLLDWFERPDSFVLILE 122
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 76 VIRLLDWFERPDSFVLILE 94
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 71 VIRLLDWFERPDSFVLILE 89
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 91 VIRLLDWFERPDSFVLILE 109
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 75 VIRLLDWFERPDSFVLILE 93
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 118 VIRLLDWFERPDSFVLILE 136
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 103 VIRLLDWFERPDSFVLILE 121
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 71 VIRLLDWFERPDSFVLILE 89
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ E+ +L L GM +S+ VP
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 90 VIRLLDWFERPDSFVLILE 108
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 321 SNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCSEQGNAEF-TNEVLLILKLQHKNLVKLL 378
S++LGQG V++G G A++ ++ S + E ++ KL HKN+VKL
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL- 72
Query: 379 GFCVDGD----EKLLVYEFMPNSSLDAIL 403
F ++ + K+L+ EF P SL +L
Sbjct: 73 -FAIEEETTTRHKVLIMEFCPCGSLYTVL 100
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 90 VIRLLDWFERPDSFVLILE 108
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 118 VIRLLDWFERPDSFVLILE 136
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 71 VIRLLDWFERPDSFVLILE 89
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 76 VIRLLDWFERPDSFVLILE 94
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 110 VIRLLDWFERPDSFVLILE 128
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 123 VIRLLDWFERPDSFVLILE 141
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 76 VIRLLDWFERPDSFVLILE 94
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 91 VIRLLDWFERPDSFVLILE 109
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 91 VIRLLDWFERPDSFVLILE 109
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 74 VIRLLDWFERPDSFVLILE 92
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ E+ +L L GM +S+ VP
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSC--SEQGNAEFTNEVLLILKLQHKNLVKLLGF 380
+G G +G V + G++VA+++LS SE E+LL+ +QH+N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 381 CVDGDEKLLVYEF---MPNSSLD-AILFGMRFS 409
Y+F MP D + GM FS
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFS 142
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ E+ +L L GM +S+ VP
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ E+ +L L GM +S+ VP
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ E+ +L L GM +S+ VP
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKN 373
+++F + +LGQG FG V K + D + A++++ E+ + +EV+L+ L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVMLLASLNHQY 63
Query: 374 LVK 376
+V+
Sbjct: 64 VVR 66
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ E+ +L L GM +S+ VP
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 323 MLGQGGFGPVYKGV-LSDGKEVAV-----ERLSSCSEQGNA-EFTNEVLLILKLQ--HKN 373
+LG GGFG VY G+ +SD VA+ +R+S E N EV+L+ K+
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 374 LVKLLGFCVDGDEKLLVYE 392
+++LL + D +L+ E
Sbjct: 98 VIRLLDWFERPDSFVLILE 116
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKN 373
+++F + +LGQG FG V K + D + A++++ E+ + +EV+L+ L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVMLLASLNHQY 63
Query: 374 LVK 376
+V+
Sbjct: 64 VVR 66
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 306 IDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLL 365
IDL L + F ++G G +G VYKG ++A ++ + E E+ +
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINM 73
Query: 366 ILKL-QHKNLVKLLGFCVDG------DEKLLVYEF 393
+ K H+N+ G + D+ LV EF
Sbjct: 74 LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 381
+G+G +G VYK + G+ A++ RL E + E+ ++ +L+H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 382 VDGDEKLLVYEFM 394
+LV+E +
Sbjct: 70 HTKKRLVLVFEHL 82
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSC--SEQGNAEFTNEVLLILKLQHKNLVKLLGF 380
+G G +G V + G++VA+++LS SE E+LL+ +QH+N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 381 CVDGDEKLLVYEF---MPNSSLD-AILFGMRFS 409
Y+F MP D + G++FS
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFS 124
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 381
+G+G +G VYK + G+ A++ RL E + E+ ++ +L+H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 382 VDGDEKLLVYEFM 394
+LV+E +
Sbjct: 70 HTKKRLVLVFEHL 82
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVE--RLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 381
+G+G +G VYK + G+ A++ RL E + E+ ++ +L+H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 382 VDGDEKLLVYEFM 394
+LV+E +
Sbjct: 70 HTKKRLVLVFEHL 82
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 21/106 (19%)
Query: 324 LGQGGFGPVYKGVLSDG-----------KEVAVERLSS-CSEQGNAEFTNEVLLILKL-Q 370
LG+G FG V VL++ +VAV+ L S +E+ ++ +E+ ++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL-----FGMRFSFS 411
HKN++ LLG C ++ E+ +L L G+ FSF+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFN 138
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERL---SSCSEQG-NAEFTNEVLLILKLQH 371
++F LG+G FG VY K + ++ S ++G + E+ + L+H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 372 KNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
N++++ + D L+ EF P L
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGEL 102
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERL---SSCSEQG-NAEFTNEVLLILKLQH 371
++F LG+G FG VY K + ++ S ++G + E+ + L+H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 372 KNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
N++++ + D L+ EF P L
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGEL 101
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ E+ +L L GM +S+ VP
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERL---SSCSEQG-NAEFTNEVLLILKLQH 371
++F LG+G FG VY K + ++ S ++G + E+ + L+H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 372 KNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
N++++ + D L+ EF P L
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGEL 101
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 311 LHVASNNFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCS---EQGNAEFTNEVLLI 366
+H+ N+FS ++G+GGFG VY +D GK A++ L +QG NE +++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 311 LHVASNNFSDSNMLGQGGFGPVYKGVLSD-GKEVAVERLSSCS---EQGNAEFTNEVLLI 366
+H+ N+FS ++G+GGFG VY +D GK A++ L +QG NE +++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ E+ +L L GM +S+ VP
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ E+ +L L GM +S+ VP
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 311 LHVASNNFSDSNMLGQGGFGPVY 333
+H+ N+FS ++G+GGFG VY
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVY 206
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ E+ +L L GM +S+ VP
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 311 LHVASNNFSDSNMLGQGGFGPVY 333
+H+ N+FS ++G+GGFG VY
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVY 205
>pdb|2FN6|A Chain A, Helicobacter Pylori Psec, Aminotransferase Involved In The
Biosynthesis Of Pseudoaminic Acid
pdb|2FN6|B Chain B, Helicobacter Pylori Psec, Aminotransferase Involved In The
Biosynthesis Of Pseudoaminic Acid
pdb|2FNI|A Chain A, Psec Aminotransferase Involved In Pseudoaminic Acid
Biosynthesis
pdb|2FNI|B Chain B, Psec Aminotransferase Involved In Pseudoaminic Acid
Biosynthesis
pdb|2FNU|A Chain A, Psec Aminotransferase With External Aldimine
pdb|2FNU|B Chain B, Psec Aminotransferase With External Aldimine
Length = 375
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 319 SDSNMLGQGGFGPVYKGVLSDGK--EVAVERL 348
+ +NML + G+ PV+ G+ +DG E+A+E+L
Sbjct: 86 ATANMLLESGYTPVFAGIKNDGNIDELALEKL 117
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 324 LGQGGFGPVYKGVL--SDGK--EVAVERLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 376
LG G FG V +G GK VAV+ L + +F EV + L H+NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 377 LLGFCVDGDEKLLVYEFMPNSSL 399
L G + K +V E P SL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSL 101
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLS-DGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKN 373
+++F + +LGQG FG V K + D + A++++ E+ + +EV L+ L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVXLLASLNHQY 63
Query: 374 LVK 376
+V+
Sbjct: 64 VVR 66
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 324 LGQGGFGPVYKGVL--SDGK--EVAVERLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 376
LG G FG V +G GK VAV+ L + +F EV + L H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 377 LLGFCVDGDEKLLVYEFMPNSSL 399
L G + K +V E P SL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSL 97
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 324 LGQGGFGPVYKGVL--SDGK--EVAVERLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 376
LG G FG V +G GK VAV+ L + +F EV + L H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 377 LLGFCVDGDEKLLVYEFMPNSSL 399
L G + K +V E P SL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSL 97
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 324 LGQGGFG--------PVYKGVLSDGKEVAVERLSS-CSEQGNAEFTNEVLLILKLQHKNL 374
LG+G FG P G G+ VAV+ L + Q + + E+ ++ L H+++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 375 VKLLGFCVD-GDEKL-LVYEFMPNSSL 399
+K G C D G L LV E++P SL
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSL 122
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 324 LGQGGFGPVYKGVL--SDGK--EVAVERLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 376
LG G FG V +G GK VAV+ L + +F EV + L H+NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 377 LLGFCVDGDEKLLVYEFMPNSSL 399
L G + K +V E P SL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSL 101
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 324 LGQGGFGPVYKGVL--SDGK--EVAVERLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 376
LG G FG V +G GK VAV+ L + +F EV + L H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 377 LLGFCVDGDEKLLVYEFMPNSSL 399
L G + K +V E P SL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSL 97
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 324 LGQGGFGPVYKGVL--SDGK--EVAVERLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 376
LG G FG V +G GK VAV+ L + +F EV + L H+NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 377 LLGFCVDGDEKLLVYEFMPNSSL 399
L G + K +V E P SL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSL 107
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 324 LGQGGFGPVYKGVL--SDGK--EVAVERLSS---CSEQGNAEFTNEVLLILKLQHKNLVK 376
LG G FG V +G GK VAV+ L + +F EV + L H+NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 377 LLGFCVDGDEKLLVYEFMPNSSL 399
L G + K +V E P SL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSL 107
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ E+ +L L GM S+ VP
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 324 LGQGGFGPVYKGVLSDG-----------KEVAVERLSS-CSEQGNAEFTNEVLLILKL-Q 370
LG+G FG V VL++ +VAV+ L S +E+ ++ +E+ ++ + +
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
HKN++ LLG C ++ E+ +L L R
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 118
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 324 LGQGGFGPVYKGVLSDG-----------KEVAVERLSS-CSEQGNAEFTNEVLLILKL-Q 370
LG+G FG V VL++ +VAV+ L S +E+ ++ +E+ ++ + +
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
HKN++ LLG C ++ E+ +L L R
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 122
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 324 LGQGGFGPVYKGVLSDG-----------KEVAVERLSS-CSEQGNAEFTNEVLLILKL-Q 370
LG+G FG V VL++ +VAV+ L S +E+ ++ +E+ ++ + +
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
HKN++ LLG C ++ E+ +L L R
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 121
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 324 LGQGGFGPVYKGVLSDG-----------KEVAVERLSS-CSEQGNAEFTNEVLLILKL-Q 370
LG+G FG V VL++ +VAV+ L S +E+ ++ +E+ ++ + +
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
HKN++ LLG C ++ E+ +L L R
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 114
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 324 LGQGGFGPVYKGVLSDG-----------KEVAVERLSS-CSEQGNAEFTNEVLLILKL-Q 370
LG+G FG V VL++ +VAV+ L S +E+ ++ +E+ ++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
HKN++ LLG C ++ E+ +L L R
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 129
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 324 LGQGGFGPV--YKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFC 381
LG+GGF V +G L DG A++R+ +Q E E + H N+++L+ +C
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 382 V 382
+
Sbjct: 96 L 96
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 293 LGRDDDLKAQDFYIDLETLHVASNNFSDSNMLGQGGFGP-VYKGVLSDGKEVAVER-LSS 350
+G L+ D + + V +F ++LG G G VY+G+ D ++VAV+R L
Sbjct: 1 MGSSPSLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPE 59
Query: 351 CSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKL 388
C + E LL +H N+++ FC + D +
Sbjct: 60 CFSFADREVQ---LLRESDEHPNVIRY--FCTEKDRQF 92
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 324 LGQGGFGPVYKGVLSDG-----------KEVAVERLSS-CSEQGNAEFTNEVLLILKL-Q 370
LG+G FG V VL++ +VAV+ L S +E+ ++ +E+ ++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
HKN++ LLG C ++ E+ +L L R
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 129
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 324 LGQGGFGPVYKGVLSDG-----------KEVAVERLSS-CSEQGNAEFTNEVLLILKL-Q 370
LG+G FG V VL++ +VAV+ L S +E+ ++ +E+ ++ + +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAILFGMR 407
HKN++ LLG C ++ E+ +L L R
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 170
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLSDGKE-VAVERL-----SSCSEQGNAEFTNEVLLILK 368
+ + + LG+G F VYK + + VA++++ S + N E+ L+ +
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 369 LQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
L H N++ LL LV++FM + L+ I+
Sbjct: 69 LSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVII 102
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 316 NNFSDSNMLGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILK----LQ 370
+ F M GQG FG V G S G VA++++ + F N L I++ L
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-----DPRFRNRELQIMQDLAVLH 77
Query: 371 HKNLVKLLGF 380
H N+V+L +
Sbjct: 78 HPNIVQLQSY 87
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 16/100 (16%)
Query: 311 LHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNA-----------EF 359
LH + ++ + G +G V GV S+G VA++R+ + G
Sbjct: 17 LHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRV 76
Query: 360 TNEVLLILKLQHKNLVKLLGFCVDGDE----KL-LVYEFM 394
E+ L+ H N++ L V +E KL LV E M
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM 116
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ + +L L GM +S+ VP
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 16/100 (16%)
Query: 311 LHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNA-----------EF 359
LH + ++ + G +G V GV S+G VA++R+ + G
Sbjct: 17 LHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRV 76
Query: 360 TNEVLLILKLQHKNLVKLLGFCVDGDE----KL-LVYEFM 394
E+ L+ H N++ L V +E KL LV E M
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM 116
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 324 LGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCV 382
LG G FG V++ V + G+ + +++ NE+ ++ +L H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 383 DGDEKLLVYEFMPNSSL 399
D E +L+ EF+ L
Sbjct: 119 DKYEMVLILEFLSGGEL 135
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 21/106 (19%)
Query: 324 LGQGGFGPVYKGVLSDG-----------KEVAVERLSS-CSEQGNAEFTNEVLLILKL-Q 370
LG+G FG V VL++ +VAV+ L S +E+ ++ +E+ ++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 371 HKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL-----FGMRFSFS 411
HKN++ LLG C ++ E+ +L L G+ +S++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYN 138
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 324 LGQGGFGPVYKGVLSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVD 383
LG+G FG V++ V + K+ + + E+ ++ +H+N++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 384 GDEKLLVYEFMPNSSLD 400
+E ++++EF+ S LD
Sbjct: 73 MEELVMIFEFI--SGLD 87
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 324 LGQGGFGPVYK----GVLSDGKE----VAVERLSS-CSEQGNAEFTNEVLLILKL-QHKN 373
LG+G FG V G+ D + VAV+ L +E+ ++ +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 374 LVKLLGFCVDGDEKLLVYEFMPNSSLDAILF-----GMRFSFSFIIVP 416
++ LLG C ++ + +L L GM +S+ VP
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Query: 286 GLHYQHVLGRDDDLKAQDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVA 344
G H + G + +F ++ T S+N+ LG+G F V + V + G E A
Sbjct: 1 GPHMASMTGGQQMGRGSEFMMNASTKF--SDNYDVKEELGKGAFSVVRRCVHKTTGLEFA 58
Query: 345 VERLSS--CSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
+ +++ S + + E + KLQH N+V+L + LV++ + L
Sbjct: 59 AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 115
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 318 FSDSNMLGQGGFGPVYKGVLSDGKEVA 344
F+ + +G+G FG VYKG+ + KEV
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVV 47
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAVERLSS--CSEQGNAEFTNEVLLILKLQH 371
S+N+ LG+G F V + V + G E A + +++ S + + E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 372 KNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
N+V+L + LV++ + L
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL 92
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAVERLSS--CSEQGNAEFTNEVLLILKLQH 371
S+N+ LG+G F V + V + G E A + +++ S + + E + KLQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 372 KNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
N+V+L + LV++ + L
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGEL 91
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 322 NMLGQGGFGPVYKGV--LSDGKEVAVERLSSCSEQGNA-EFTNEVLLILKLQHKNLVKLL 378
+ LG+G + VYKG L+D VA++ + E+G EV L+ L+H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 379 GFCVDGDEKLLVYEFM 394
LV+E++
Sbjct: 67 DIIHTEKSLTLVFEYL 82
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 323 MLGQGGFGPVYKGVLSDGKEVAVERLSSCS----EQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+GGF ++ +D KEV ++ S + + E+ + L H+++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 379 GFCVDGDEKLLVYEFMPNSSL 399
GF D D +V E SL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSL 102
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 291 HVLGRDDDLKA-QDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEV----AV 345
HV + LK D +D T+ + LG+GGF Y+ D KEV V
Sbjct: 20 HVDPKSAPLKEIPDVLVDPRTM----KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 75
Query: 346 ERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
+ + + E+ + L + ++V GF D D +V E SL
Sbjct: 76 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL 129
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 323 MLGQGGFGPVYKGVLSDGKEVAVERLSSCS----EQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+GGF ++ +D KEV ++ S + + E+ + L H+++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 379 GFCVDGDEKLLVYEFMPNSSL 399
GF D D +V E SL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSL 108
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 323 MLGQGGFGPVYKGVLSDGKEVAVERLSSCS----EQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+GGF ++ +D KEV ++ S + + E+ + L H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 379 GFCVDGDEKLLVYEFMPNSSL 399
GF D D +V E SL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL 104
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 323 MLGQGGFGPVYKGVLSDGKEVAVERLSSCS----EQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+GGF ++ +D KEV ++ S + + E+ + L H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 379 GFCVDGDEKLLVYEFMPNSSL 399
GF D D +V E SL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL 104
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 291 HVLGRDDDLKA-QDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEV----AV 345
HV + LK D +D T+ + LG+GGF Y+ D KEV V
Sbjct: 20 HVDPKSAPLKEIPDVLVDPRTM----KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 75
Query: 346 ERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
+ + + E+ + L + ++V GF D D +V E SL
Sbjct: 76 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL 129
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGVLSD-GKEVAVE------RLSSC--SEQGNAEFTNEVLL 365
S +S + LG G FG V+ V + KEV V+ L C + + T E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 366 ILKLQHKNLVKLL 378
+ +++H N++K+L
Sbjct: 83 LSRVEHANIIKVL 95
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 323 MLGQGGFGPVYKGVLSDGKEVAVERLSSCS----EQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+GGF ++ +D KEV ++ S + + E+ + L H+++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 379 GFCVDGDEKLLVYEFMPNSSL 399
GF D D +V E SL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSL 126
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 291 HVLGRDDDLKA-QDFYIDLETLHVASNNFSDSNMLGQGGFGPVYKGVLSDGKEV----AV 345
HV + LK D +D T+ + LG+GGF Y+ D KEV V
Sbjct: 20 HVDPKSAPLKEIPDVLVDPRTM----KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 75
Query: 346 ERLSSCSEQGNAEFTNEVLLILKLQHKNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
+ + + E+ + L + ++V GF D D +V E SL
Sbjct: 76 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL 129
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 323 MLGQGGFGPVYKGVLSDGKEVAVERLSSCS----EQGNAEFTNEVLLILKLQHKNLVKLL 378
LG+GGF ++ +D KEV ++ S + + E+ + L H+++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 379 GFCVDGDEKLLVYEFMPNSSL 399
GF D D +V E SL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSL 128
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 315 SNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAVERLSS--CSEQGNAEFTNEVLLILKLQH 371
S+N+ LG+G F V + V + G E A + +++ S + + E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 372 KNLVKLLGFCVDGDEKLLVYEFMPNSSL 399
N+V+L + LV++ + L
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL 92
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 314 ASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHK 372
N + +G G FG +Y G ++ G+EVA++ C + + + E + +Q
Sbjct: 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK--LECVKTKHPQLHIESKIYKMMQGG 62
Query: 373 NLVKLLGFC-VDGDEKLLVYEFMPNSSLDAILFGMR-FSFSFIIV 415
+ + +C +GD ++V E + S D F R FS +++
Sbjct: 63 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLL 107
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 314 ASNNFSDSNMLGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHK 372
N + +G G FG +Y G ++ G+EVA++ C + + + E + +Q
Sbjct: 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK--LECVKTKHPQLHIESKIYKMMQGG 64
Query: 373 NLVKLLGFC-VDGDEKLLVYEFMPNSSLDAILFGMR-FSFSFIIV 415
+ + +C +GD ++V E + S D F R FS +++
Sbjct: 65 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLL 109
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERL-SSCSEQGNAEFTNEVLLILK 368
N LG+G FG V K K VAV+ L + S + +E ++ +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 369 LQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
+ H +++KL G C LL+ E+ SL L
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERL-SSCSEQGNAEFTNEVLLILK 368
N LG+G FG V K K VAV+ L + S + +E ++ +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 369 LQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
+ H +++KL G C LL+ E+ SL L
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 316 NNFSDSNMLGQGGFGPVYKGVLSDGK------EVAVERL-SSCSEQGNAEFTNEVLLILK 368
N LG+G FG V K K VAV+ L + S + +E ++ +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 369 LQHKNLVKLLGFCVDGDEKLLVYEFMPNSSLDAIL 403
+ H +++KL G C LL+ E+ SL L
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 316 NNFSDSNMLGQGGFGPVYKGV-LSDGKEVAVERLSSCSEQGNAEFTNEVLLILKLQHKNL 374
N F +G G FG +Y G + +EVA++ + ++ + +++ IL+ +
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQ-GGTGI 65
Query: 375 VKLLGFCVDGDEKLLVYEFMPNSSLDAILF 404
+ F V+GD +LV + + S D F
Sbjct: 66 PNVRWFGVEGDYNVLVMDLLGPSLEDLFNF 95
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,172,602
Number of Sequences: 62578
Number of extensions: 527571
Number of successful extensions: 1793
Number of sequences better than 100.0: 555
Number of HSP's better than 100.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 328
Number of HSP's that attempted gapping in prelim test: 1380
Number of HSP's gapped (non-prelim): 576
length of query: 472
length of database: 14,973,337
effective HSP length: 102
effective length of query: 370
effective length of database: 8,590,381
effective search space: 3178440970
effective search space used: 3178440970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)