Your job contains 1 sequence.
>041748
MEDTEEEEEFLALRLAIVASDSCSVDKQRKRKRITRVSLNSSNISPYHHEGCCVSEGKIF
RLLQMREQMLKLDHKRKGVVDEDGNNNNKGLHLIHLLLITATAADENNVSLALENLTELY
QTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEEEFLAFTDLYRVSPYFQ
LAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRIT
GFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNT
LKIYLKISDTLNLVRSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSLDDCLPQ
ESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYERMETWKARMESHEFGGIKMSS
KSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERYDGKAISLGWQDRCLLTATAWHCV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041748
(479 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 407 3.3e-45 2
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 404 1.5e-44 2
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 401 9.8e-44 2
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 424 6.7e-43 2
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 388 9.5e-42 2
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 384 2.0e-41 2
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 400 1.5e-39 2
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 401 2.4e-37 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 400 3.0e-37 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 395 1.8e-36 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 397 2.2e-36 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 389 4.4e-36 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 386 9.2e-36 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 386 1.7e-35 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 345 1.0e-34 2
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 338 1.1e-30 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 333 2.9e-28 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 193 1.3e-27 2
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 326 1.6e-27 1
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 309 4.9e-25 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 214 6.2e-25 2
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 302 3.5e-24 2
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 291 4.5e-23 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 248 4.1e-18 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 244 1.2e-17 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 135 3.3e-16 3
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 229 4.4e-16 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 219 4.8e-15 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 196 3.9e-13 2
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 187 3.3e-12 2
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 117 2.6e-11 2
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 160 1.9e-08 1
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 407 (148.3 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 106/339 (31%), Positives = 183/339 (53%)
Query: 106 ENNVSLALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEEE 165
ENN+ +A + EL VS++G+ +QR+ A+ +GL ARL S Y+ + + E E
Sbjct: 63 ENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESYE 122
Query: 166 FLAFTD-LYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQS 224
FL++ L+ V PYF+ + +AN AI EA +++ +H+IDF + G QW +LIQ+
Sbjct: 123 FLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDE-----ERIHIIDFQIGQGSQWIALIQA 177
Query: 225 LSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS---RLVN 281
+ A G + RITG G L + RL +K F ++ F F + R S + N
Sbjct: 178 FA--ARPGGAPNIRITGVGDG-SVLVTVKKRLEKLAKKF-DVPFRFNAVSRPSCEVEVEN 233
Query: 282 IRKKKHETVAANLVF---HLNTLKIYLKIS-DTL-NLVRSIKPTIVTLVEQEGSRSPRNF 336
+ + E + N + HL + ++ D L +V+S+ P +VTLVEQE + + F
Sbjct: 234 LDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPF 293
Query: 337 LSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYP 396
L RF+E+L Y+ AMF+S+D LP+ +R++IE++ + +++ +++ C+ ++
Sbjct: 294 LPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAER------IE 347
Query: 397 RYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTH 435
R+E + WK+R F +SS +I A + +R +
Sbjct: 348 RHELLGKWKSRFSMAGFEPYPLSS--IISATIRALLRDY 384
Score = 85 (35.0 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 397 RYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERY 456
R+E + WK+R F +SS +I A + +R + +NG+ + ER
Sbjct: 348 RHELLGKWKSRFSMAGFEPYPLSS--IISATIRALLRDY-----------SNGYAIEER- 393
Query: 457 DGKAISLGWQDRCLLTATAW 476
DG A+ LGW DR L+++ AW
Sbjct: 394 DG-ALYLGWMDRILVSSCAW 412
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 404 (147.3 bits), Expect = 1.5e-44, Sum P(2) = 1.5e-44
Identities = 113/334 (33%), Positives = 180/334 (53%)
Query: 107 NNVSLALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEEEF 166
+N+ A + L E+ Q + G S QRV A+F++ ++ARLL Y + + +
Sbjct: 304 DNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAALPSRWMPQTHS 363
Query: 167 LAFTDLYRV----SPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLI 222
L ++V SP + +HFTANQAI EAFE++ ++H+ID D+ G QWP L
Sbjct: 364 LKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKE-----DSVHIIDLDIMQGLQWPGLF 418
Query: 223 QSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIR--GS--- 277
L+ + G R+TG G S+E LQ T RL F+ L FEF L G+
Sbjct: 419 HILASRP--GGPPHVRLTGLGTSMEALQATGKRLSDFADKL-GLPFEFCPLAEKVGNLDT 475
Query: 278 RLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVEQEGSRSPRNFL 337
+N+RK+ E VA + + H + + + TL L++ + P +VT+VEQ+ S + +FL
Sbjct: 476 ERLNVRKR--EAVAVHWLQH-SLYDVTGSDAHTLWLLQRLAPKVVTVVEQDLSHAG-SFL 531
Query: 338 SRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCD-ESDNGNYDNYYP 396
RF+E++HY++A+FDSL +ES +R +E+ L KEI+++L S +G
Sbjct: 532 GRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSRSGEV----- 586
Query: 397 RYERMETWKARMESHEFGGIKMSSKSLIQAKLLL 430
+ E+W+ +M+ F GI ++ + QA LLL
Sbjct: 587 ---KFESWREKMQQCGFKGISLAGNAATQATLLL 617
Score = 91 (37.1 bits), Expect = 1.5e-44, Sum P(2) = 1.5e-44
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 400 RMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERYDGK 459
+ E+W+ +M+ F GI ++ + QA LLL + F + G+ + + D
Sbjct: 587 KFESWREKMQQCGFKGISLAGNAATQATLLLGM--------FPSD----GYTLVD--DNG 632
Query: 460 AISLGWQDRCLLTATAW 476
+ LGW+D LLTA+AW
Sbjct: 633 TLKLGWKDLSLLTASAW 649
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 401 (146.2 bits), Expect = 9.8e-44, Sum P(2) = 9.8e-44
Identities = 113/339 (33%), Positives = 180/339 (53%)
Query: 106 ENNVSLALENLTEL-YQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEE 164
+NN++LA + ++ VS G ++++V +FA+ LA R+ R SP I ++
Sbjct: 234 QNNLTLAEALVKQIGCLAVSQAG-AMRKVATYFAEALARRIY-RLSPPQNQIDHCLSDTL 291
Query: 165 EFLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQS 224
+ Y PY + AHFTANQAILEAFE + +HVIDF ++ G QWP+L+Q+
Sbjct: 292 QM----HFYETCPYLKFAHFTANQAILEAFE-----GKKRVHVIDFSMNQGLQWPALMQA 342
Query: 225 LSEKATNGNRISFRITGFGR----SIEELQETENRLVSFSKSFRNLVFEFQGLIRGS--- 277
L+ + G +FR+TG G + + L E +L +++ ++ FE++G + S
Sbjct: 343 LALR--EGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAI-HVEFEYRGFVANSLAD 399
Query: 278 ---RLVNIRKKKHETVAANLVFHLNTLKIYLK-ISDTLNLVRSIKPTIVTLVEQEGSRSP 333
++ +R E VA N VF L+ L I L +V+ IKP I T+VEQE + +
Sbjct: 400 LDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGVVKQIKPVIFTVVEQESNHNG 459
Query: 334 RNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDN 393
FL RF ESLHY++ +FDSL+ +P +K +S + YLGK+I +++ C+ D
Sbjct: 460 PVFLDRFTESLHYYSTLFDSLEG-VPNSQDKVMS--EVYLGKQICNLVACEGPDR----- 511
Query: 394 YYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKI 432
R+E + W R S + S + QA +LL +
Sbjct: 512 -VERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSV 549
Score = 79 (32.9 bits), Expect = 9.8e-44, Sum P(2) = 9.8e-44
Identities = 24/80 (30%), Positives = 37/80 (46%)
Query: 397 RYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERY 456
R+E + W R S + S + QA +LL + F N+ G++V E
Sbjct: 514 RHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSV--------F---NSGQGYRV-EES 561
Query: 457 DGKAISLGWQDRCLLTATAW 476
+G + LGW R L+T +AW
Sbjct: 562 NG-CLMLGWHTRPLITTSAW 580
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 424 (154.3 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 105/295 (35%), Positives = 168/295 (56%)
Query: 157 TKQPTEEEEFLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGF 216
TK + E + L +++P+ + H TANQAIL+A E N+N ALH++D D+S G
Sbjct: 134 TKNNNSDFESCYYLWLNQLTPFIRFGHLTANQAILDATET---NDNGALHILDLDISQGL 190
Query: 217 QWPSLIQSLSEKATNGNRI--SFRITGFGRSIEELQETENRLVSFSKS------FRNLVF 268
QWP L+Q+L+E+++N + S RITG GR + L T +RL F+ S F LV
Sbjct: 191 QWPPLMQALAERSSNPSSPPPSLRITGCGRDVTGLNRTGDRLTRFADSLGLQFQFHTLVI 250
Query: 269 ---EFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDT----LNLVRSIKPTI 321
+ GL+ RL+ + + ET+A N V L+ KI+ D L+ ++S+ I
Sbjct: 251 VEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLH--KIFNDDGDMIGHFLSAIKSLNSRI 308
Query: 322 VTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSML 381
VT+ E+E + +FL+RF E++ ++ A+FDSL+ LP S +RL++E+ + GKEI ++
Sbjct: 309 VTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVV 368
Query: 382 NCDESDNGNYDNYYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHY 436
+E++ R+ R E W+ M+ F + + S +L QAKLLL++ HY
Sbjct: 369 AAEETERKQ------RHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRL--HY 415
Score = 46 (21.3 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 106 ENNVSLALENLTELYQTVSLTGDSVQRVVAHFADGLAARL 145
++N + A L+ L S GDS +R+V F L+ R+
Sbjct: 54 QSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 388 (141.6 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 111/326 (34%), Positives = 173/326 (53%)
Query: 116 LTELYQTVSLTGDSVQRVVAHFADGLAARLLTRR-----SPFYEMITKQPTEEEEFLAFT 170
L+E+ + S G S +RVVA+FA L R+++ SP E ++ F A
Sbjct: 63 LSEISEICSPFGSSPERVVAYFAQALQTRVISSYLSGACSPLSEKPLTVVQSQKIFSALQ 122
Query: 171 DLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKAT 230
VSP + +HFTANQAI +A + + ++H+ID DV G QWP+L L+ +
Sbjct: 123 TYNSVSPLIKFSHFTANQAIFQALDGE-----DSVHIIDLDVMQGLQWPALFHILASRPR 177
Query: 231 NGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEF---QGLIRGSRL--VNIRKK 285
S RITGFG S + L T RL F+ S NL FEF +G+I G+ + + +
Sbjct: 178 KLR--SIRITGFGSSSDLLASTGRRLADFASSL-NLPFEFHPIEGII-GNLIDPSQLATR 233
Query: 286 KHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVEQEGSRSPR-NFLSRFMESL 344
+ E V + + H + +TL ++R +KP ++T+VEQE S +FL RF+E+L
Sbjct: 234 QGEAVVVHWMQH-RLYDVTGNNLETLEILRRLKPNLITVVEQELSYDDGGSFLGRFVEAL 292
Query: 345 HYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYERMETW 404
HY++A+FD+L D L +ES +R ++E+ LG EI++++ + G R +RM+ W
Sbjct: 293 HYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNIV----AHGGG------RRKRMK-W 341
Query: 405 KARMESHEFGGIKMSSKSLIQAKLLL 430
K + F + + QA LLL
Sbjct: 342 KEELSRVGFRPVSLRGNPATQAGLLL 367
Score = 71 (30.1 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 397 RYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERY 456
R +RM+ WK + F + + QA LLL + L + NG+ + E
Sbjct: 335 RRKRMK-WKEELSRVGFRPVSLRGNPATQAGLLLGM------LPW------NGYTLVEE- 380
Query: 457 DGKAISLGWQDRCLLTATAW 476
+G + LGW+D LLTA+AW
Sbjct: 381 NG-TLRLGWKDLSLLTASAW 399
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 384 (140.2 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 108/339 (31%), Positives = 182/339 (53%)
Query: 106 ENNVSLALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEEE 165
+NN+ LA + + S ++++V +FA+GLA R+ Y + P ++
Sbjct: 165 QNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRI-------YRIY---PRDDVA 214
Query: 166 FLAFTD-----LYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPS 220
+F+D Y PY + AHFTANQAILE F +HVID +++G QWP+
Sbjct: 215 LSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATA-----EKVHVIDLGLNHGLQWPA 269
Query: 221 LIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS--- 277
LIQ+L+ + NG FR+TG G S+ ++QE +L + + + FEF+ + +
Sbjct: 270 LIQALALRP-NGPP-DFRLTGIGYSLTDIQEVGWKLGQLASTI-GVNFEFKSIALNNLSD 326
Query: 278 ---RLVNIRKKKHETVAANLVFHLNTLKIYL-KISDTLNLVRSIKPTIVTLVEQEGSRSP 333
+++IR E+VA N VF L+ L + I L+ ++SI+P I+T+VEQE + +
Sbjct: 327 LKPEMLDIRPGL-ESVAVNSVFELHRLLAHPGSIDKFLSTIKSIRPDIMTVVEQEANHNG 385
Query: 334 RNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDN 393
FL RF ESLHY++++FDSL+ P ++ +S + +LG++I +++ C+ D
Sbjct: 386 TVFLDRFTESLHYYSSLFDSLEG--PPSQDRVMS--ELFLGRQILNLVACEGEDR----- 436
Query: 394 YYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKI 432
R+E + W+ R F + + S + QA +LL +
Sbjct: 437 -VERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLAL 474
Score = 72 (30.4 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 23/80 (28%), Positives = 37/80 (46%)
Query: 397 RYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERY 456
R+E + W+ R F + + S + QA +LL + Y +G+ V E
Sbjct: 439 RHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLAL---YA--------GADGYNV-EEN 486
Query: 457 DGKAISLGWQDRCLLTATAW 476
+G + LGWQ R L+ +AW
Sbjct: 487 EG-CLLLGWQTRPLIATSAW 505
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 400 (145.9 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 115/339 (33%), Positives = 182/339 (53%)
Query: 106 ENNVSLALENLTELYQTVSLT-GDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEE 164
+ N++LA + L + T++ + ++ +V +FA LA R+ + ++ E
Sbjct: 193 QENLNLA-DALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRDYTAETDVCAAVNPSFE 251
Query: 165 EFLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQS 224
E L Y PY + AHFTANQAILEA R +HVID ++ G QWP+L+Q+
Sbjct: 252 EVLEM-HFYESCPYLKFAHFTANQAILEAV-----TTARRVHVIDLGLNQGMQWPALMQA 305
Query: 225 LSEKATNGNRISFRITGFG----RSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLV 280
L+ + G SFR+TG G + + LQ+ +L F+++ + FEF+GL S L
Sbjct: 306 LALRP--GGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNM-GVEFEFKGLAAES-LS 361
Query: 281 NIR------KKKHETVAANLVFHLNTLKIYL-KISDTLNLVRSIKPTIVTLVEQEGSRSP 333
++ + + ET+ N VF L+ L I LN V++IKP+IVT+VEQE + +
Sbjct: 362 DLEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLLNTVKAIKPSIVTVVEQEANHNG 421
Query: 334 RNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDN 393
FL RF E+LHY++++FDSL+D S R+ E YLG++I +++ + SD
Sbjct: 422 IVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEV-YLGRQILNVVAAEGSDR----- 475
Query: 394 YYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKI 432
R+E W+ RM+S F I + S + QA +LL +
Sbjct: 476 -VERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSL 513
Score = 184 (69.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 72/283 (25%), Positives = 134/283 (47%)
Query: 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFG----RSIEELQETENRLVS 258
R +HVID ++ G QWP+L+Q+L+ + G SFR+TG G + + LQ+ +L
Sbjct: 284 RRVHVIDLGLNQGMQWPALMQALALRP--GGPPSFRLTGIGPPQTENSDSLQQLGWKLAQ 341
Query: 259 FSKSFRNLVFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTL-KIY--LKISDTLNLVR 315
F+++ + FEF+GL S L ++ + ET + +N++ +++ L S ++ +
Sbjct: 342 FAQNM-GVEFEFKGLAAES-LSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLL 399
Query: 316 SIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGK 375
+ I + + + F++ + + SL D L E + L + + +
Sbjct: 400 NTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSL--EDSYSLPSQDRVMSE 457
Query: 376 EI--KSMLNCDESDNGNYDNYYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIR 433
+ +LN ++ + R+E W+ RM+S F I + S + QA +LL +
Sbjct: 458 VYLGRQILNVVAAEGSDR---VERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSL- 513
Query: 434 THYCPLQFDEENNNNGFKVFERYDGKAISLGWQDRCLLTATAW 476
Y +G++V E DG + +GWQ R L+T +AW
Sbjct: 514 --YA--------TGDGYRV-EENDG-CLMIGWQTRPLITTSAW 544
Score = 38 (18.4 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 14/61 (22%), Positives = 22/61 (36%)
Query: 77 KGVVDEDGNNNNKGXXXXXXXXXXXXXXDENNVSLALENLTELYQTVSLTGDSVQRVVAH 136
K D+D NN+N + V+ LE L E+ + G +V H
Sbjct: 30 KKKADDDNNNSNMDDELLAVLGYKVRSSEMAEVAQKLEQL-EMVLSNDDVGSTVLNDSVH 88
Query: 137 F 137
+
Sbjct: 89 Y 89
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 107/356 (30%), Positives = 191/356 (53%)
Query: 106 ENNVSLALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEE- 164
EN++ +A + +L Q VS++G+ +QR+ A+ +GL A+L + S Y+ + + P
Sbjct: 132 ENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPAST 191
Query: 165 EFLAFTD-LYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQ 223
E L++ LY V PYF+ + +AN AI EA +E+ NR +H+IDF + G QW +LIQ
Sbjct: 192 ELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEE----NR-VHIIDFQIGQGSQWVTLIQ 246
Query: 224 SLSEKATNGNRISFRITGFGRSIEE------LQETENRLVSFSKSFRNLVFEFQGL-IRG 276
+ + + RI RITG L NRL +K F N+ FEF + +
Sbjct: 247 AFAARPGGPPRI--RITGIDDMTSAYARGGGLSIVGNRLAKLAKQF-NVPFEFNSVSVSV 303
Query: 277 SRLV--NIRKKKHETVAANLVFHLNTLKIYLKISDT-----LNLVRSIKPTIVTLVEQEG 329
S + N+ + E +A N F L+ + ++ L +V+S+ P +VTLVEQE
Sbjct: 304 SEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQES 363
Query: 330 SRSPRNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNG 389
+ + F RFME+++Y+AAMF+S+D LP++ +R+++E++ L +++ +++ C+ +D
Sbjct: 364 NTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADR- 422
Query: 390 NYDNYYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEEN 445
R+E + W++R F +S L+ + + +R + + +E +
Sbjct: 423 -----VERHELLGKWRSRFGMAGFTPYPLSP--LVNSTIKSLLRNYSDKYRLEERD 471
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 112/339 (33%), Positives = 182/339 (53%)
Query: 106 ENNVSLALENLTEL-YQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEE 164
+ N+++A + ++ + VS G ++++V +FA+ LA R+ R SP I ++
Sbjct: 182 KENLTVAEALVKQIGFLAVSQIG-AMRKVATYFAEALARRIY-RLSPSQSPIDHSLSDTL 239
Query: 165 EFLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQS 224
+ Y PY + AHFTANQAILEAF+ + +HVIDF +S G QWP+L+Q+
Sbjct: 240 QM----HFYETCPYLKFAHFTANQAILEAFQ-----GKKRVHVIDFSMSQGLQWPALMQA 290
Query: 225 LSEKATNGNRISFRITGFGR----SIEELQETENRLVSFSKSFRNLVFEFQGLIRGS--- 277
L+ + G FR+TG G + + L E +L +++ ++ FE++G + +
Sbjct: 291 LALRP--GGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAI-HVEFEYRGFVANTLAD 347
Query: 278 ---RLVNIRKKKHETVAANLVFHLNTLKIYL-KISDTLNLVRSIKPTIVTLVEQEGSRSP 333
++ +R + E+VA N VF L+ L I L +V IKP I T+VEQE + +
Sbjct: 348 LDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGVVNQIKPEIFTVVEQESNHNS 407
Query: 334 RNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDN 393
FL RF ESLHY++ +FDSL+ +P +K +S + YLGK+I +++ CD D
Sbjct: 408 PIFLDRFTESLHYYSTLFDSLEG-VPSGQDKVMS--EVYLGKQICNVVACDGPDR----- 459
Query: 394 YYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKI 432
R+E + W+ R S F + S + QA +LL +
Sbjct: 460 -VERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLAL 497
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 74/298 (24%), Positives = 129/298 (43%)
Query: 192 EAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGR----SIE 247
+A E + R +HVIDF +S G QWP+L+Q+L+ + G FR+TG G + +
Sbjct: 259 QAILEAFQGKKR-VHVIDFSMSQGLQWPALMQALALRP--GGPPVFRLTGIGPPAPDNFD 315
Query: 248 ELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIRKKKHETVAANLV-FHLNTLKIYLK 306
L E +L +++ ++ FE++G + + L ++ E + + +N++ +
Sbjct: 316 YLHEVGCKLAHLAEAI-HVEFEYRGFVANT-LADLDASMLELRPSEIESVAVNSV---FE 370
Query: 307 ISDTLNLVRSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSLDDCLPQESNKRL 366
+ L +I ++ +V Q P F ES H D + L S
Sbjct: 371 LHKLLGRPGAIDK-VLGVVNQI---KPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFD 426
Query: 367 SIE-----KNYLGKEI---KSMLNCDESDNGNYDNYYPRYERMETWKARMESHEFGGIKM 418
S+E ++ + E+ K + N D + R+E + W+ R S F +
Sbjct: 427 SLEGVPSGQDKVMSEVYLGKQICNVVACDG---PDRVERHETLSQWRNRFGSAGFAAAHI 483
Query: 419 SSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERYDGKAISLGWQDRCLLTATAW 476
S + QA +LL + F N G++V E DG + LGW R L+ +AW
Sbjct: 484 GSNAFKQASMLLAL--------F---NGGEGYRV-EESDG-CLMLGWHTRPLIATSAW 528
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 395 (144.1 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 109/347 (31%), Positives = 182/347 (52%)
Query: 106 ENNVSLALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMIT-KQPTEEE 164
E + AL + EL Q VS+ GD QR+ A+ +GLAAR+ Y + K+P +E
Sbjct: 235 EGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRALKCKEPPSDE 294
Query: 165 EFLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQS 224
A L+ V P F+ AN AILEA + + E +H+IDFD++ G Q+ +LI+S
Sbjct: 295 RLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEE-----VHIIDFDINQGNQYMTLIRS 349
Query: 225 LSEKATNGNRISFRITGFG------RSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSR 278
++E G R R+TG RSI L+ RL ++ + F+F+ + +
Sbjct: 350 IAELP--GKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAED-NGVSFKFKAMPSKTS 406
Query: 279 LVN---IRKKKHETVAANLVFHLN-----TLKIYLKISDTLNLVRSIKPTIVTLVEQEGS 330
+V+ + K ET+ N F L+ ++ + + L++V+S+ P +VT+VEQ+ +
Sbjct: 407 IVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVN 466
Query: 331 RSPRNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGN 390
+ F RF+E+ Y++A+F+SLD LP+ES +R+++E+ L ++I +++ C+ +
Sbjct: 467 TNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEER-- 524
Query: 391 YDNYYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYC 437
RYE W+ARM F MS+K + L+K YC
Sbjct: 525 ----IERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIK--QQYC 565
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 397 (144.8 bits), Expect = 2.2e-36, P = 2.2e-36
Identities = 111/362 (30%), Positives = 182/362 (50%)
Query: 132 RVVAHFADGLAARLLTRRSPFYEMITK-----QPTEEEEFLAFTDLYRVSPYFQLAHFTA 186
R++A++ + LA R+ R P I + E+E A L +V+P + HFTA
Sbjct: 314 RLIAYYIEALALRV-ARMWPHIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTA 372
Query: 187 NQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSI 246
N+ +L AFE +H+IDFD+ G QWPS QSL+ + + + RITG G S
Sbjct: 373 NEMLLRAFE-----GKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHV--RITGIGESK 425
Query: 247 EELQETENRLVSFSKSFRNLVFEFQGLI---RGSRLVNIRKKKHETVAANLVFHLNTLKI 303
EL ET +RL F+++ NL FEF ++ RL + K+ E+VA N V ++ +
Sbjct: 426 LELNETGDRLHGFAEAM-NLQFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKT-L 483
Query: 304 Y----LKISDTLNLVRSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSLDDCLP 359
Y I D L L+RS P + L EQE + +R SL Y++AMFD++ L
Sbjct: 484 YDGTGAAIRDFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLA 543
Query: 360 QESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYERMETWKARMESHEFGGIKMS 419
+S R+ +E+ G+EI++++ C+ S R+ W+ +E F + +S
Sbjct: 544 TDSLMRVKVEEMLFGREIRNIVACEGSHRQE------RHVGFRHWRRMLEQLGFRSLGVS 597
Query: 420 SKSLIQAKLLLKI-----RTHYCPLQFDEENNNNGFKVFERYDGKAISLGWQDRCLLTAT 474
+ ++Q+K+LL++ + + DE+N G + G ++L W ++ L T +
Sbjct: 598 EREVLQSKMLLRMYGSDNEGFFNVERSDEDNGGEGGR------GGGVTLRWSEQPLYTIS 651
Query: 475 AW 476
AW
Sbjct: 652 AW 653
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 119/374 (31%), Positives = 191/374 (51%)
Query: 114 ENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEEEFLAFTDLY 173
+ L + ++VS +GD +QRV +FA+ L+ + SP + + E+ L++ L
Sbjct: 193 DTLIRIKESVSESGDPIQRVGYYFAEALSHK--ETESP---SSSSSSSLEDFILSYKTLN 247
Query: 174 RVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGN 233
PY + AH TANQAILEA + +NN +H++DF + G QW +L+Q+L+ +++ G
Sbjct: 248 DACPYSKFAHLTANQAILEATNQ---SNN--IHIVDFGIFQGIQWSALLQALATRSS-GK 301
Query: 234 RISFRITGF-----GRSI-EELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVN---IRK 284
RI+G G S L T NRL F+ + +L FEF ++ +L+N R
Sbjct: 302 PTRIRISGIPAPSLGDSPGPSLIATGNRLRDFA-AILDLNFEFYPVLTPIQLLNGSSFRV 360
Query: 285 KKHETVAANLVFHLNTL--KIYLKISDTLNLVRSIKPTIVTLVEQEGSRSPRNFLSRFME 342
E + N + L L + + L L RS+ P IVTL E E S + F +R
Sbjct: 361 DPDEVLVVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANRVKN 420
Query: 343 SLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYERME 402
SL +++A+F+SL+ L ++S +RL +E+ G+ I ++ D+ DN + E E
Sbjct: 421 SLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDD-DNNKPGTRFGLMEEKE 479
Query: 403 TWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERYDGKAIS 462
W+ ME F +K S+ ++ QAKLLL +Y N + + + E G IS
Sbjct: 480 QWRVLMEKAGFEPVKPSNYAVSQAKLLL---WNY--------NYSTLYSLVESEPG-FIS 527
Query: 463 LGWQDRCLLTATAW 476
L W + LLT ++W
Sbjct: 528 LAWNNVPLLTVSSW 541
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 117/339 (34%), Positives = 182/339 (53%)
Query: 110 SLALENLT---ELYQTVSLTGDS----VQRVVAHFADGLAARLLTRRSPFYEMITKQPTE 162
++ LENL+ L + V L S + +V +FA+ LA R+ R P I P+
Sbjct: 167 AVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIY-RIHPSAAAI--DPSF 223
Query: 163 EEEFLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLI 222
EE + + Y PY + AHFTANQAILEA +R +HVID ++ G QWP+L+
Sbjct: 224 EE--ILQMNFYDSCPYLKFAHFTANQAILEAV-----TTSRVVHVIDLGLNQGMQWPALM 276
Query: 223 QSLSEKATNGNRISFRITGFGR--SIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLV 280
Q+L+ + G SFR+TG G + E +QE +L +++ + F+F GL RL
Sbjct: 277 QALALRP--GGPPSFRLTGVGNPSNREGIQELGWKLAQLAQAI-GVEFKFNGLTT-ERLS 332
Query: 281 NIR------KKKHETVAANLVFHLN-TLKIYLKISDTLNLVRSIKPTIVTLVEQEGSRSP 333
++ + + ET+ N VF L+ L I L V+++KP +VT+VEQE + +
Sbjct: 333 DLEPDMFETRTESETLVVNSVFELHPVLSQPGSIEKLLATVKAVKPGLVTVVEQEANHNG 392
Query: 334 RNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDN 393
FL RF E+LHY++++FDSL+D + S R+ E YLG++I +++ + SD
Sbjct: 393 DVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEV-YLGRQILNLVATEGSDR----- 446
Query: 394 YYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKI 432
R+E + W+ RM S F + + S + QA LLL +
Sbjct: 447 -IERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLAL 484
Score = 173 (66.0 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 72/295 (24%), Positives = 135/295 (45%)
Query: 192 EAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGR--SIEEL 249
+A E + +R +HVID ++ G QWP+L+Q+L+ + G SFR+TG G + E +
Sbjct: 247 QAILEAV-TTSRVVHVIDLGLNQGMQWPALMQALALRP--GGPPSFRLTGVGNPSNREGI 303
Query: 250 QETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISD 309
QE +L +++ + F+F GL RL ++ ET + +N++ ++
Sbjct: 304 QELGWKLAQLAQAI-GVEFKFNGLTT-ERLSDLEPDMFETRTESETLVVNSV---FELHP 358
Query: 310 TLNLVRSIKPTIVTL-VEQEG-----SRSPRNFLSRFMESLHYFAAMFDSLDDCLPQESN 363
L+ SI+ + T+ + G + + F++ + + SL D L E
Sbjct: 359 VLSQPGSIEKLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSL--EDG 416
Query: 364 KRLSIEKNYLGKEI--KSMLNCDESDNGNYDNYYPRYERMETWKARMESHEFGGIKMSSK 421
+ + + + + +LN ++ + R+E + W+ RM S F + + S
Sbjct: 417 VVIPSQDRVMSEVYLGRQILNLVATEGSDR---IERHETLAQWRKRMGSAGFDPVNLGSD 473
Query: 422 SLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERYDGKAISLGWQDRCLLTATAW 476
+ QA LLL + +G++V E DG ++ L WQ + L+ A+AW
Sbjct: 474 AFKQASLLLAL-----------SGGGDGYRV-EENDG-SLMLAWQTKPLIAASAW 515
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 386 (140.9 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 108/330 (32%), Positives = 180/330 (54%)
Query: 112 ALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEEEFLAFTD 171
A + L ++ ++VS GD +RV +F + L+ RL + SP + + E+ L++
Sbjct: 235 ASKTLLQIRESVSELGDPTERVAFYFTEALSNRL-SPNSPATS--SSSSSTEDLILSYKT 291
Query: 172 LYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATN 231
L PY + AH TANQAILEA E+ +N+ +H++DF + G QWP+L+Q+L+ + T+
Sbjct: 292 LNDACPYSKFAHLTANQAILEATEK----SNK-IHIVDFGIVQGIQWPALLQALATR-TS 345
Query: 232 GNRISFRITGF-----GRSIE-ELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVN---I 282
G R++G G S E L T NRL F+K +L F+F ++ L+N
Sbjct: 346 GKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVL-DLNFDFIPILTPIHLLNGSSF 404
Query: 283 RKKKHETVAANLVFHL-NTLKIYLKISDT-LNLVRSIKPTIVTLVEQEGSRSPRNFLSRF 340
R E +A N + L L I DT L L +S+ P +VTL E E S + F +R
Sbjct: 405 RVDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRV 464
Query: 341 MESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYER 400
+L +++A+F+SL+ L ++S +R+ +E+ G+ I ++ +++ G + R E
Sbjct: 465 KNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKT--GIHRE---RMEE 519
Query: 401 METWKARMESHEFGGIKMSSKSLIQAKLLL 430
E W+ ME+ F +K+S+ ++ QAK+LL
Sbjct: 520 KEQWRVLMENAGFESVKLSNYAVSQAKILL 549
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 345 (126.5 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 100/319 (31%), Positives = 164/319 (51%)
Query: 116 LTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMIT-KQPTEEEEFLAFTDLYR 174
+++L Q VS++G+ VQR+ A+ +GL ARL + S Y+ + K PT E LY
Sbjct: 250 ISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALRCKDPTGPELLTYMHILYE 309
Query: 175 VSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNR 234
PYF+ + +AN AI EA + N +H+IDF +S G QW SLI++L A G
Sbjct: 310 ACPYFKFGYESANGAIAEAVK-----NESFVHIIDFQISQGGQWVSLIRALG--ARPGGP 362
Query: 235 ISFRITGFG--RSIEELQ---ETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIRK---KK 286
+ RITG RS Q E + + + FEF G V I K +
Sbjct: 363 PNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRN 422
Query: 287 HETVAAN--LVFHL---NTLKIYLKISDTLNLVRSIKPTIVTLVEQEGSRSPRNFLSRFM 341
E +A N LV H ++ + L LV+ + P +VTLVEQE + + FL RF+
Sbjct: 423 GEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFV 482
Query: 342 ESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYERM 401
E+++++ A+F+S+D L ++ +R+++E++ L +E+ +++ C+ + R+E +
Sbjct: 483 ETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREE------RHEPL 536
Query: 402 ETWKARMESHEFGGIKMSS 420
W++R F +SS
Sbjct: 537 GKWRSRFHMAGFKPYPLSS 555
Score = 58 (25.5 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 444 ENNNNGFKVFERYDGKAISLGWQDRCLLTATAW 476
E+ + + + ER DG A+ LGW+++ L+T+ AW
Sbjct: 566 ESYSEKYTLEER-DG-ALYLGWKNQPLITSCAW 596
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 111/377 (29%), Positives = 187/377 (49%)
Query: 116 LTELYQTVSLTGD--SVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEEEFL--AFTD 171
L L VS GD +++R+ AHF +GL+ +LL R S + ++ + AF
Sbjct: 129 LARLKDLVS-PGDRTNMERLAAHFTNGLS-KLLERDSVLCPQQHRDDVYDQADVISAFEL 186
Query: 172 LYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATN 231
L +SPY + TA QAILEA + + R +H++D+D++ G QW SL+Q+L + T
Sbjct: 187 LQNMSPYVNFGYLTATQAILEAVKYE-----RRIHIVDYDINEGVQWASLMQALVSRNTG 241
Query: 232 GNRISFRITGFGR------SIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVN---I 282
+ RIT R S+ +QET RL +F+ S F +Q + + +
Sbjct: 242 PSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQ-PFSYQHCKLDTNAFSTSSL 300
Query: 283 RKKKHETVAANLVFHLNTLKIYLKIS--DTLNLVRSIKPTIVTLVEQE-GSRSPRNFLSR 339
+ + E V N + HL S L+ +++ P +VTLV +E G + FL R
Sbjct: 301 KLVRGEAVVINCMLHLPRFSHQTPSSVISFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYR 360
Query: 340 FMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYE 399
FM+ LH F+A+FDSL+ L + R +E+ ++G + + L +++ +++
Sbjct: 361 FMDLLHQFSAIFDSLEAGLSIANPARGFVERVFIGPWVANWLTRITANDAEVESF----- 415
Query: 400 RMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERYDGK 459
+W +E++ F +++S + QAKLLL + F N+GF+V E
Sbjct: 416 --ASWPQWLETNGFKPLEVSFTNRCQAKLLLSL--------F-----NDGFRV-EELGQN 459
Query: 460 AISLGWQDRCLLTATAW 476
+ LGW+ R L++A+ W
Sbjct: 460 GLVLGWKSRRLVSASFW 476
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 333 (122.3 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 102/352 (28%), Positives = 171/352 (48%)
Query: 112 ALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEEEFL-AFT 170
A E L ++ + S G+ +R+ +FA+ L ARL + Y ++ + T + L A+
Sbjct: 412 ANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSSKKTSAADMLKAYQ 471
Query: 171 DLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKAT 230
V P+ + A AN +++ + N +H+IDF +SYGFQWP+LI LS
Sbjct: 472 TYMSVCPFKKAAIIFANHSMM-----RFTANANTIHIIDFGISYGFQWPALIHRLSLSRP 526
Query: 231 NGNRISFRITGF-----G-RSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI-- 282
G+ RITG G R E +QET +RL + + N+ FE+ + + + +
Sbjct: 527 GGSP-KLRITGIELPQRGFRPAEGVQETGHRLARYCQR-HNVPFEYNAIAQKWETIQVED 584
Query: 283 -RKKKHETVAANLVFHL-NTLKIYLKISD----TLNLVRSIKPTIVTLVEQEGSRSPRNF 336
+ ++ E V N +F N L + ++ L L+R I P + G+ + F
Sbjct: 585 LKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFF 644
Query: 337 LSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYP 396
++RF E+L +++A+FD D L +E RL EK + G+EI +++ C+ ++
Sbjct: 645 VTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTER------VE 698
Query: 397 RYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNN 448
R E + W+AR+ F + + K L+Q L LKI Y FD + N N
Sbjct: 699 RPETYKQWQARLIRAGFRQLPLE-KELMQ-NLKLKIENGY-DKNFDVDQNGN 747
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 193 (73.0 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 36/121 (29%), Positives = 72/121 (59%)
Query: 311 LNLVRSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEK 370
LN + + P ++ + EQ+ + + R +ESL+ +AA+FD L+ +P+ S R+ +EK
Sbjct: 333 LNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEK 392
Query: 371 NYLGKEIKSMLNCDESDNGNYDNYYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLL 430
G+EIK++++C+ + R+E++E W R++ FG + +S +++QA+ LL
Sbjct: 393 MLFGEEIKNIISCEGFERRE------RHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLL 446
Query: 431 K 431
+
Sbjct: 447 Q 447
Score = 190 (71.9 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 57/200 (28%), Positives = 99/200 (49%)
Query: 108 NVSLALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTE----E 163
N + ALE L+ L S GD++QR+ A+F + LA R+L Y+ + T
Sbjct: 72 NANAALEQLSHL---ASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNATQTRTNNVS 128
Query: 164 EEFLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQ 223
EE + + P ++++ N+AILEA E + + +HVID D S QW +L+Q
Sbjct: 129 EEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGE-----KMVHVIDLDASEPAQWLALLQ 183
Query: 224 SLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI- 282
+ + + + RITG E L++ +RL+ ++ ++ F+F ++ +N+
Sbjct: 184 AFNSRPEGPPHL--RITGVHHQKEVLEQMAHRLIEEAEKL-DIPFQFNPVVSRLDCLNVE 240
Query: 283 --RKKKHETVAANLVFHLNT 300
R K E +A + V L+T
Sbjct: 241 QLRVKTGEALAVSSVLQLHT 260
Score = 103 (41.3 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 41/144 (28%), Positives = 72/144 (50%)
Query: 338 SRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNG-NYDNYY- 395
S ME L + +L DCL + R S ++ +++ ML +E N + + +
Sbjct: 356 STLMERLLESLYTYAALFDCL-ETKVPRTSQDRI----KVEKMLFGEEIKNIISCEGFER 410
Query: 396 -PRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFE 454
R+E++E W R++ FG + +S +++QA+ LL+ C FD G+++ E
Sbjct: 411 RERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQ----GCG--FD------GYRIKE 458
Query: 455 RYDGKAISLGWQDRCLLTATAWHC 478
G A+ + WQDR L + +AW C
Sbjct: 459 E-SGCAV-ICWQDRPLYSVSAWRC 480
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 326 (119.8 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 103/366 (28%), Positives = 174/366 (47%)
Query: 112 ALENLTELYQTVSLTGDSVQRVVAHFADGLAARLL-TRRSPFYEMITKQPTEEEEFL-AF 169
A E L E+ + S GD+ QR+ HFA+ L AR+ T +P T T + L A+
Sbjct: 228 AFEKLKEIREHSSRHGDATQRLGYHFAEALEARITGTMTTPI--SATSSRTSMVDILKAY 285
Query: 170 TDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKA 229
+ P + +FTAN+ I E + + LH+IDF + YGFQWP LIQ+LS++
Sbjct: 286 KGFVQACPTLIMCYFTANRTINE-----LASKATTLHIIDFGILYGFQWPCLIQALSKRD 340
Query: 230 TNGNRISFRITGF-----G-RSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283
G + R+TG G R E ++ET RL F F N+ FE+ + + + +
Sbjct: 341 I-GPPL-LRVTGIELPQSGFRPSERVEETGRRLKRFCDKF-NVPFEYSFIAKNWENITLD 397
Query: 284 K---KKHETVAANLVFHLN-----TLKIYLKISDTLNLVRSIKPTIVTLVEQEGSRSPRN 335
ET N + L T+ + L L R I P + E G+ +
Sbjct: 398 DLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPF 457
Query: 336 FLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYY 395
FL+RF E+L + +++FD + L ++ N R +E+ + ++ S++ C+ S+ +
Sbjct: 458 FLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSER------F 511
Query: 396 PRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFER 455
R E + W+ R+ F K+S + + K ++K R H F +N+N+ +F+
Sbjct: 512 ARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHK---DFVIDNDNHW--MFQG 566
Query: 456 YDGKAI 461
+ G+ +
Sbjct: 567 WKGRVL 572
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 309 (113.8 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 95/333 (28%), Positives = 165/333 (49%)
Query: 127 GDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEEEFLAFTDLYRVS-PYFQLAHFT 185
GD QR+ FA+GL ARL S Y+ I +P L L+ P+ +L++F
Sbjct: 378 GDGNQRLAHCFANGLEARLAGTGSQIYKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFI 437
Query: 186 ANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRIS---FRITGF 242
N+ I + + N++ +HVIDF + YGFQWP+LI S + RI+ F GF
Sbjct: 438 TNKTIRD-----LVGNSQRVHVIDFGILYGFQWPTLIHRFSMYGSPKVRITGIEFPQPGF 492
Query: 243 GRSIEELQETENRLVSFSKSFRNLVFEFQGLIR---GSRLVNIRKKKHETVAANLVFHLN 299
R + ++ET RL +++K F + FE++ + + +L ++ + E N ++
Sbjct: 493 -RPAQRVEETGQRLAAYAKLF-GVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAE 550
Query: 300 TLKIY-LKIS---DT-LNLVRSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSL 354
L +K+ DT LNL+ I P + G+ + F++RF E+L +F+++FD L
Sbjct: 551 NLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDML 610
Query: 355 DDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYERMETWKA-RMESHEF 413
+ +P+E +R+ +E G+E +++ C+ G + R ER ET+K + +
Sbjct: 611 ETIVPREDEERMFLEMEVFGREALNVIACE----G-----WERVERPETYKQWHVRAMRS 661
Query: 414 GGIKMSSKSLIQAKLLLKIRTHYCP-LQFDEEN 445
G +++ I L K+ T Y D++N
Sbjct: 662 GLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDN 694
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 214 (80.4 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 54/160 (33%), Positives = 85/160 (53%)
Query: 119 LYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMI---TKQPTEEEEFLAFTDLYRV 175
L S GD+ R+ HFA LA R+ + + ++ +P +LAF ++
Sbjct: 77 LAAAASPRGDAADRLAYHFARALALRVDAKAGHGHVVVGGGAARPASSGAYLAFN---QI 133
Query: 176 SPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNG-NR 234
+P+ + AH TANQAILEA + R +H++D D +G QWP L+Q+++E+A
Sbjct: 134 APFLRFAHLTANQAILEAVD-----GARRVHILDLDAVHGVQWPPLLQAIAERADPALGP 188
Query: 235 ISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLI 274
R+TG G + L T NRL +F++S +L F F L+
Sbjct: 189 PEVRVTGAGADRDTLLRTGNRLRAFARSI-HLPFHFTPLL 227
Score = 139 (54.0 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 40/155 (25%), Positives = 83/155 (53%)
Query: 288 ETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVEQE--GSRSPRNFLS----RFM 341
ET+A N V L+ L + +++ L V+++ P +VT+ E+E G + + R
Sbjct: 264 ETLAVNCVMFLHNLAGHDELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPRRVG 323
Query: 342 ESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYERM 401
++ +++A+F++L+ +P S +RL++E+ LG+EI++ + G + + +
Sbjct: 324 VAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVG---PSGGRW------WRGI 374
Query: 402 ETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHY 436
E W + F +S+ ++ QA+LLL++ HY
Sbjct: 375 ERWGGAARAAGFAARPLSAFAVSQARLLLRL--HY 407
Score = 73 (30.8 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 401 METWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERYDGKA 460
+E W + F +S+ ++ QA+LLL++ HY P + G+ V E A
Sbjct: 374 IERWGGAARAAGFAARPLSAFAVSQARLLLRL--HY-P--------SEGYLVQEARG--A 420
Query: 461 ISLGWQDRCLLTATAW 476
LGWQ R LL+ +AW
Sbjct: 421 CFLGWQTRPLLSVSAW 436
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 302 (111.4 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 97/353 (27%), Positives = 168/353 (47%)
Query: 116 LTELYQTVSLTGDSVQRVVAHFADGLAARLL----TRRSPFYEMIT-KQPTEEEEFLAFT 170
L ++ + S GD+ QR+ FA+ L ARL T +Y+ I+ K+ T + +++
Sbjct: 338 LRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTAAQILKSYS 397
Query: 171 DLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKAT 230
SP+ L +F +N+ IL+A ++ LH++DF + YGFQWP IQ LS K+
Sbjct: 398 VFLSASPFMTLIYFFSNKMILDAAKDA-----SVLHIVDFGILYGFQWPMFIQHLS-KSN 451
Query: 231 NGNRISFRITGF-----G-RSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS----RLV 280
G R RITG G R E +Q+T RL + K F + FE+ + + ++
Sbjct: 452 PGLR-KLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRF-GVPFEYNAIASKNWETIKME 509
Query: 281 NIRKKKHETVAANLVFHLNTLKIYLKISDT------LNLVRSIKPTIVTLVEQEGSRSPR 334
+ + +E +A N V L+ + + L L+R + P + GS +
Sbjct: 510 EFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAP 569
Query: 335 NFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNY 394
F +RF E+L +++A+FD L +E+ +R+ E + G+E+ +++ C+ D
Sbjct: 570 FFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDR------ 623
Query: 395 YPRYERMETWKARMESHEFGGIKMSSKSLIQA-KLLLKIRTHYCPLQFDEENN 446
R E + W+ RM F K L+Q + +K ++ DE++N
Sbjct: 624 VERPETYKQWQVRMIRAGFKQ-KPVEAELVQLFREKMKKWGYHKDFVLDEDSN 675
Score = 39 (18.8 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 464 GWQDRCLLTATAW 476
GW+ R L +++ W
Sbjct: 680 GWKGRILFSSSCW 692
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 291 (107.5 bits), Expect = 4.5e-23, P = 4.5e-23
Identities = 93/353 (26%), Positives = 160/353 (45%)
Query: 112 ALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSP-FYEMITKQPTEEEEFLAFT 170
A + L E+ S GD QR+ +FA+ L AR+ SP T + L
Sbjct: 243 ATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSNPFPSSTTSMVDILKAY 302
Query: 171 DLY-RVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKA 229
L+ P + +F AN++I E + + LH++DF V YGFQWP L+++LS++
Sbjct: 303 KLFVHTCPIYVTDYFAANKSIYELAMKATK-----LHIVDFGVLYGFQWPCLLRALSKRP 357
Query: 230 TNGNRISFRITGF-----G-RSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283
G R+TG G R + ++ET RL F F N+ FEF + + + +
Sbjct: 358 --GGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQF-NVPFEFNFIAKKWETITLD 414
Query: 284 K---KKHETVAANLVFHLN-----TLKIYLKISDTLNLVRSIKPTIVTLVEQEGSRSPRN 335
+ ET N + L T+ + L L R I P + E G +
Sbjct: 415 ELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPF 474
Query: 336 FLSRFMESLHYFAAMFDSLDDCLPQESN--KRLSIEKNYLGKEIKSMLNCDESDNGNYDN 393
F++RF E+L +++++FD D + E R +E+ L ++ S+++C+ ++
Sbjct: 475 FMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAER----- 529
Query: 394 YYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENN 446
+ R E + W+ R+ F +S + + +AK +++ R H D +NN
Sbjct: 530 -FARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHR-DFVIDSDNN 580
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 248 (92.4 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 93/327 (28%), Positives = 148/327 (45%)
Query: 168 AFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSE 227
A+ SP+ Q +FTANQ ILE+FE +R +H++DFD+ YG QW SLIQ L+
Sbjct: 329 AYRAFSETSPFLQFVNFTANQTILESFE----GFDR-IHIVDFDIGYGGQWASLIQELAG 383
Query: 228 KATNGNRI-SFRITGFGR----SIE-ELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVN 281
K + S +IT F S E EL+ TE L SF+ + FE + L+ L+N
Sbjct: 384 KRNRSSSAPSLKITAFASPSTVSDEFELRFTEENLRSFAGE-TGVSFEIE-LLNMEILLN 441
Query: 282 --------IRKKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVEQEGSRS- 332
R + E +A NL + + YL + L ++ I P +V ++ R+
Sbjct: 442 PTYWPLSLFRSSEKEAIAVNLPIS-SMVSGYLPL--ILRFLKQISPNVVVCSDRSCDRNN 498
Query: 333 PRNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYD 392
F + + +L Y+ ++ +SLD + SIE+ + I+ +L
Sbjct: 499 DAPFPNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLT---------- 548
Query: 393 NYYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKV 452
N Y ER W++ F + +S + QA+ LL + N GF +
Sbjct: 549 NRYRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLL------------QRNPMRGFHL 596
Query: 453 FERYDGK-AISLGWQDRCLLTATAWHC 478
+R ++ L WQ + L+T +AW C
Sbjct: 597 EKRQSSSPSLVLCWQRKELVTVSAWKC 623
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 244 (91.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 105/382 (27%), Positives = 168/382 (43%)
Query: 113 LENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEEEFLAFTDL 172
L L T S QR +H A+ L + + SP +IT + A+
Sbjct: 297 LARLNHHLNTSSNHKSPFQRAASHIAEALLSLIHNESSP--PLITPENLILR-IAAYRSF 353
Query: 173 YRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKA--T 230
SP+ Q +FTANQ+ILE+ E +R +H+IDFDV YG QW SL+Q L+
Sbjct: 354 SETSPFLQFVNFTANQSILESCNES--GFDR-IHIIDFDVGYGGQWSSLMQELASGVGGR 410
Query: 231 NGNRIS-FRITGFGR-----SIE-ELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVN-- 281
NR S ++T F S E EL+ TE L +F+ + + FE + L+ L+N
Sbjct: 411 RRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVK-IPFEIE-LLSVELLLNPA 468
Query: 282 -----IRKKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVEQEGSRSPRNF 336
+R + E +A NL + + YL + L ++ + P IV ++ R+ F
Sbjct: 469 YWPLSLRSSEKEAIAVNLPVN-SVASGYLPL--ILRFLKQLSPNIVVCSDRGCDRNDAPF 525
Query: 337 LSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYP 396
+ + SL Y ++ +SLD Q+ + SIE+ ++ I+ +L +
Sbjct: 526 PNAVIHSLQYHTSLLESLDANQNQDDS---SIERFWVQPSIEKLLM----------KRHR 572
Query: 397 RYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERY 456
ER W+ F +S + QA+ LL + N GF V +R
Sbjct: 573 WIERSPPWRILFTQCGFSPASLSQMAEAQAECLL------------QRNPVRGFHVEKRQ 620
Query: 457 DGKAISLGWQDRCLLTATAWHC 478
++ + WQ + L+T +AW C
Sbjct: 621 S--SLVMCWQRKELVTVSAWKC 640
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 135 (52.6 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 39/139 (28%), Positives = 68/139 (48%)
Query: 288 ETVAANLVFHLNTLKIYLKISDT-----LNLVRSIKPTIVTLVEQEGSRSPRNFLSRFME 342
ET+A NL F L + ++ L V+ +KP +VTLVEQE + + FL R E
Sbjct: 468 ETLAVNLAFKLYRVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSE 527
Query: 343 SLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYERME 402
S + A+ +S++ +P ++ R +E+ +G+++ + + C+ D R E
Sbjct: 528 SCACYGALLESVESTVPSTNSDRAKVEEG-IGRKLVNAVACEGIDR------IERCEVFG 580
Query: 403 TWKARMESHEFGGIKMSSK 421
W+ RM F + +S K
Sbjct: 581 KWRMRMSMAGFELMPLSEK 599
Score = 133 (51.9 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 41/127 (32%), Positives = 65/127 (51%)
Query: 106 ENNVSLALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEEE 165
E +A E L + QT +L +S +++V L +R+ SP E+ K E
Sbjct: 278 EGKTEIATEILARVSQTPNLERNSEEKLVDFMVAALRSRIA---SPVTELYGK-----EH 329
Query: 166 FLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSL 225
++ LY +SP F+L AN AIL+A + + HVIDFD+ G Q+ +L+++L
Sbjct: 330 LISTQLLYELSPCFKLGFEAANLAILDAADNN-DGGMMIPHVIDFDIGEGGQYVNLLRTL 388
Query: 226 SEKATNG 232
S + NG
Sbjct: 389 STRR-NG 394
Score = 56 (24.8 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 449 GFKVFERYDGKAISLGWQDRCLLTATAW 476
GF V E D + GW R L A+AW
Sbjct: 614 GFTVKE--DNGGVCFGWMGRALTVASAW 639
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 229 (85.7 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 101/375 (26%), Positives = 169/375 (45%)
Query: 106 ENNVSLALENLTELYQTVSL-TGDSVQRVVAHFADGLAARL--LTRRSPFYEMITKQPTE 162
E++ LA L L Q +S G ++R +F + L L +++ Y +I K
Sbjct: 217 ESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQTLNPYSLIFK---- 272
Query: 163 EEEFLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLI 222
A+ +SP Q A+FT+NQA+LE+F + LH+IDFD+ YG QW SL+
Sbjct: 273 ---IAAYKSFSEISPVLQFANFTSNQALLESF-----HGFHRLHIIDFDIGYGGQWASLM 324
Query: 223 QSLSEKATNGNRISFRITGFGRSIE----ELQETENRLVSFSKSFRNLVFEFQGL---IR 275
Q L + N +S +IT F EL T++ L F+ N+ + Q L +
Sbjct: 325 QELVLR-DNAAPLSLKITVFASPANHDQLELGFTQDNLKHFASEI-NISLDIQVLSLDLL 382
Query: 276 GSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVEQEGSRSPRN 335
GS + + E VA N+ + + + L V+ + PTI+ ++ R+
Sbjct: 383 GS-ISWPNSSEKEAVAVNI-----SAASFSHLPLVLRFVKHLSPTIIVCSDRGCERTDLP 436
Query: 336 FLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYY 395
F + SLH A+F+SLD + + IE+ + EI+ ++ D
Sbjct: 437 FSQQLAHSLHSHTALFESLD-AVNANLDAMQKIERFLIQPEIEKLV---------LDRSR 486
Query: 396 PRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQ-FDEENNNNGFKV-F 453
P M TW+A F + S+ + QA+ L++ RT P++ F E +N + +
Sbjct: 487 PIERPMMTWQAMFLQMGFSPVTHSNFTESQAECLVQ-RT---PVRGFHVEKKHNSLLLCW 542
Query: 454 ERYDGKAISLGWQDR 468
+R + +S W+ R
Sbjct: 543 QRTELVGVS-AWRCR 556
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 219 (82.2 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 93/368 (25%), Positives = 161/368 (43%)
Query: 75 KRKGVVDEDGNN---NNKGXXXXXXXXXXXXXXDENNVSLALENLTELYQTVSLTGDSVQ 131
KRK + + ++ N +G +N S L L + S +GD+ +
Sbjct: 124 KRKAIKSSEKSSKDGNKEGRWAEKLLNPCALAITASNSSRVQHYLCVLSELASSSGDANR 183
Query: 132 RVVAHFADGLAARLLTRR--SPFYEMITKQPTEEEEFL-AFTDLYRVSPYFQLAHFTANQ 188
R+ A L L + S F+ + T E + F Y VSP+F L + AN
Sbjct: 184 RLAAFGLRALQHHLSSSSVSSSFWPVFTFASAEVKMFQKTLLKFYEVSPWFALPNNMANS 243
Query: 189 AILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEE 248
AIL+ + + + LH+ID VS+G QWP+L+++LS + G RIT +
Sbjct: 244 AILQILAQD-PKDKKDLHIIDIGVSHGMQWPTLLEALSCRL-EGPPPRVRITVISDLTAD 301
Query: 249 LQETE--------NRLVSFSKSFRNLVFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNT 300
+ + ++L+ F++S + + + L +L I HE + F L+
Sbjct: 302 IPFSVGPPGYNYGSQLLGFARSLK-INLQISVL---DKLQLIDTSPHENLIVCAQFRLHH 357
Query: 301 LK--IYLKISDTLNLVRSIKPTIVTLVEQEGS-RSPRNFLSRFMESLHYFAAMFDSLDDC 357
LK I + +TL VRS++P V L E G S +F + F + L Y DS
Sbjct: 358 LKHSINDERGETLKAVRSLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLDSTSSG 417
Query: 358 LPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYERMETWKARMESHEFGGIK 417
+E+++ + + G+ K ++N + + G + +Y ERM +E+ E +
Sbjct: 418 FKEENSEERKLME---GEATKVLMNAGDMNEGK-EKWY---ERMREAGFFVEAFEEDAVD 470
Query: 418 MSSKSLIQ 425
+KSL++
Sbjct: 471 -GAKSLLR 477
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 196 (74.1 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 75/334 (22%), Positives = 150/334 (44%)
Query: 105 DENNVSLALENLTELYQTV-SLTGDSVQRVVAHFADGLAARLL-TRRSPFYEMITKQPTE 162
+ + + LA L+ L Q + S G +QR +F + L + L + R+P ++
Sbjct: 134 ESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRNPI--RLSSWSEI 191
Query: 163 EEEFLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLI 222
+ A + +SP +HFTANQAIL++ Q +++ +HV+DF++ +G Q+ SL+
Sbjct: 192 VQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQ--SSSPFVHVVDFEIGFGGQYASLM 249
Query: 223 QSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFR-NLVFEFQGLIRGSRLVN 281
+ ++EK+ +G + E + + L F+ + EF L++ +++
Sbjct: 250 REITEKSVSGGFLRVTAVVAEECAVETRLVKENLTQFAAEMKIRFQIEFV-LMKTFEMLS 308
Query: 282 IRKKKHETVAANLVFHLNTLKIYLK-ISDTLNLVRSIKPTIVTLVEQEG---SRSPRNFL 337
+ + +V + L I+D +N +R + P +V V+ EG +F
Sbjct: 309 FKAIRFVEGERTVVLISPAIFRRLSGITDFVNNLRRVSPKVVVFVDSEGWTEIAGSGSFR 368
Query: 338 SRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPR 397
F+ +L ++ + +SLD P + +E L +I + + +D R
Sbjct: 369 REFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVET-AADR--------R 419
Query: 398 YERMETWKARMESHEFGGIKMSSKSLIQAKLLLK 431
+ TW+ + I++S + QA+ LL+
Sbjct: 420 HTGEMTWREAFCAAGMRPIQLSQFADFQAECLLE 453
Score = 48 (22.0 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 443 EENNNNGFKVFERYDGKAISLGWQDRCLLTATAW 476
E+ GF V +R G+ + L W R L+ +AW
Sbjct: 453 EKAQVRGFHVAKR-QGELV-LCWHGRALVATSAW 484
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 187 (70.9 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 62/264 (23%), Positives = 128/264 (48%)
Query: 105 DENNVS-LALENLTELYQTVSLTGDSVQRVVAHFADGLAARLL-TRRSPFYEMITKQPTE 162
DE +++ + L L + QT + G +QR +F + L + L T R+ +
Sbjct: 113 DELHLAHVVLSQLNQRLQTSA--GRPLQRAAFYFKEALGSLLTGTNRNQLFSW----SDI 166
Query: 163 EEEFLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLI 222
++ A + +SP +HFTANQAIL++ Q +++ +HV+DF++ +G Q+ SL+
Sbjct: 167 VQKIRAIKEFSGISPIPLFSHFTANQAILDSLSSQ--SSSPFVHVVDFEIGFGGQYASLM 224
Query: 223 QSLSEKATNGN--RISFRITGFGRSIEELQETENRLVSFSKSFR-NLVFEFQGLIRGSRL 279
+ ++EK+ NG R++ + ++E EN L F+ + EF L++ +
Sbjct: 225 REIAEKSANGGFLRVT-AVVAEDCAVETRLVKEN-LTQFAAEMKIRFQIEFV-LMKTFEI 281
Query: 280 VNIRKKKHETVAANLVFHLNTL-KIYLKISDTLNLVRSIKPTIVTLVEQEG---SRSPRN 335
++ + + +V + + + I++ +N + + P +V V+ EG + +
Sbjct: 282 LSFKAIRFVDGERTVVLISPAIFRRVIGIAEFVNNLGRVSPNVVVFVDSEGCTETAGSGS 341
Query: 336 FLSRFMESLHYFAAMFDSLDDCLP 359
F F+ + ++ + +SLD P
Sbjct: 342 FRREFVSAFEFYTMVLESLDAAAP 365
Score = 48 (22.0 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 443 EENNNNGFKVFERYDGKAISLGWQDRCLLTATAW 476
E+ GF V +R G+ + L W R L+ +AW
Sbjct: 428 EKAQVRGFHVAKR-QGELV-LCWHGRALVATSAW 459
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 117 (46.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 45/180 (25%), Positives = 80/180 (44%)
Query: 105 DENNVSLALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEE 164
D N+ +L + L L GDS QR+ + F L +R +++ I+ P +E
Sbjct: 39 DSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFLPQADE 98
Query: 165 -------EFLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQ 217
E AF DL +P+ + AN AIL A E +H++D +++ Q
Sbjct: 99 LHRFSVVELAAFVDL---TPWHRFGFIAANAAILTAVE-----GYSTVHIVDLSLTHCMQ 150
Query: 218 WPSLIQSLSEKATNGNRISFRITGFGRSIE-------ELQETENRLVSFSKSFRNLVFEF 270
P+LI +++ + + ++T S +E ++LV+F+ + RN+ EF
Sbjct: 151 IPTLIDAMASRLNKPPPL-LKLTVVSSSDHFPPFINISYEELGSKLVNFATT-RNITMEF 208
Score = 114 (45.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 33/124 (26%), Positives = 63/124 (50%)
Query: 311 LNLVRSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEK 370
L +RS+ P IVTL+E++ + N ++R + +YF FD+ D + E + E
Sbjct: 265 LKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFM-SEQRRWYEAEI 323
Query: 371 NYLGKEIKSMLNCDESDNGNYDNYYPRYERMET---WKARMESHEFGGIKMSSKSLIQAK 427
++ +I++++ + ++ R ER ET W RM EFGG+++ ++ K
Sbjct: 324 SW---KIENVVAKEGAE---------RVERTETKRRWIERMREAEFGGVRVKEDAVADVK 371
Query: 428 LLLK 431
+L+
Sbjct: 372 AMLE 375
Score = 72 (30.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 397 RYERMET---WKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVF 453
R ER ET W RM EFGG+++ ++ K +L E + G+ +
Sbjct: 338 RVERTETKRRWIERMREAEFGGVRVKEDAVADVKAML-------------EEHAVGWGMK 384
Query: 454 ERYDGKAISLGWQDRCLLTATAW 476
+ D +++ L W+ ++ AT W
Sbjct: 385 KEDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 86/393 (21%), Positives = 165/393 (41%)
Query: 106 ENNVSLALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYE-MITKQPTEEE 164
+ + + A + L L + S GD+ Q++ ++F L R+ Y M+T TE+
Sbjct: 156 DKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKT 215
Query: 165 ---EFLAFTDL--YRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWP 219
E T L VSP+ H AN AILEA + + + +H++D ++ QWP
Sbjct: 216 CSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAK-----IHIVDISSTFCTQWP 270
Query: 220 SLIQSLSEKATNGNRISFR-ITGFGRSIEE-------LQETENRLVSFSK----SFRNLV 267
+L+++L+ ++ + + + + + + ++E NR+ F++ F+ +
Sbjct: 271 TLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNI 330
Query: 268 FEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDT-LNLVRSIKPTIVTLVE 326
G + L + K E +A N V ++ + D ++ R ++P IVT+VE
Sbjct: 331 IHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVE 390
Query: 327 QEGSRSPRNFLSRFMESLHYFAAMFDSLDDCLP--QESNKRLSIEKNYLGKEI-KSMLNC 383
+E E L F C +ES R S E+ L + +++++
Sbjct: 391 EEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDL 450
Query: 384 DESDNGNYDNYYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDE 443
+ + R E W RM + FG + S + + LL+ ++ E
Sbjct: 451 VACEPSDSTE---RRETARKWSRRMRNSGFGAVGYSDEVADDVRALLR--------RYKE 499
Query: 444 ENNNNGFKVFERYDGKAISLGWQDRCLLTATAW 476
+ + + D I L W+D+ ++ A+AW
Sbjct: 500 ----GVWSMVQCPDAAGIFLCWRDQPVVWASAW 528
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 479 460 0.00095 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 622 (66 KB)
Total size of DFA: 274 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.72u 0.12s 40.84t Elapsed: 00:00:02
Total cpu time: 40.73u 0.12s 40.85t Elapsed: 00:00:02
Start: Sat May 11 03:23:25 2013 End: Sat May 11 03:23:27 2013