Query 041748
Match_columns 479
No_of_seqs 157 out of 715
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 17:31:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041748.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041748hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.5 0.00028 9.5E-09 68.8 9.4 107 204-327 71-179 (261)
2 3dtn_A Putative methyltransfer 96.0 0.027 9.3E-07 52.1 9.6 178 188-418 33-211 (234)
3 4a6d_A Hydroxyindole O-methylt 94.4 0.33 1.1E-05 48.7 12.4 117 187-329 168-286 (353)
4 3htx_A HEN1; HEN1, small RNA m 94.1 0.33 1.1E-05 55.0 12.6 121 188-329 711-837 (950)
5 3dh0_A SAM dependent methyltra 94.0 0.83 2.8E-05 41.4 13.2 114 188-326 27-142 (219)
6 3dp7_A SAM-dependent methyltra 94.0 0.77 2.6E-05 46.0 14.0 105 203-327 179-288 (363)
7 1x19_A CRTF-related protein; m 93.7 0.7 2.4E-05 46.0 13.1 117 187-328 179-297 (359)
8 3bkx_A SAM-dependent methyltra 93.6 0.62 2.1E-05 43.9 12.0 121 189-333 34-166 (275)
9 2r3s_A Uncharacterized protein 93.6 1.4 4.9E-05 42.8 14.9 117 188-328 153-273 (335)
10 3mgg_A Methyltransferase; NYSG 93.2 0.69 2.3E-05 43.7 11.5 103 203-326 37-141 (276)
11 3jwg_A HEN1, methyltransferase 92.5 1 3.4E-05 41.0 11.3 121 188-329 19-143 (219)
12 3jwh_A HEN1; methyltransferase 92.3 1.3 4.6E-05 40.1 11.9 116 189-328 20-142 (217)
13 3h2b_A SAM-dependent methyltra 92.0 1.4 4.9E-05 39.3 11.5 98 204-326 42-140 (203)
14 3ujc_A Phosphoethanolamine N-m 91.4 1.4 4.6E-05 40.9 11.0 133 167-326 25-158 (266)
15 3mcz_A O-methyltransferase; ad 91.3 3.3 0.00011 40.7 14.2 115 189-327 169-288 (352)
16 2qe6_A Uncharacterized protein 91.1 2.5 8.4E-05 40.8 12.8 138 170-326 45-195 (274)
17 4fsd_A Arsenic methyltransfera 90.9 2 7E-05 43.3 12.5 108 204-326 84-202 (383)
18 3p9c_A Caffeic acid O-methyltr 90.8 1.5 5.1E-05 44.1 11.4 108 188-327 190-299 (364)
19 3ocj_A Putative exported prote 90.8 1.4 5E-05 42.5 10.9 106 203-326 118-226 (305)
20 3gwz_A MMCR; methyltransferase 90.6 1.9 6.3E-05 43.3 11.8 107 203-329 202-310 (369)
21 1qzz_A RDMB, aclacinomycin-10- 90.3 3.2 0.00011 41.0 13.2 113 188-327 172-288 (374)
22 3dlc_A Putative S-adenosyl-L-m 90.1 2 7E-05 38.3 10.5 114 187-326 33-147 (219)
23 2ip2_A Probable phenazine-spec 89.7 2.6 9E-05 41.1 11.8 103 205-327 169-273 (334)
24 2aot_A HMT, histamine N-methyl 89.7 1.2 4.1E-05 42.9 9.1 115 203-325 52-170 (292)
25 3e23_A Uncharacterized protein 89.3 2.7 9.2E-05 37.8 10.8 96 204-326 44-140 (211)
26 1vl5_A Unknown conserved prote 89.2 7.5 0.00026 36.1 14.1 100 203-325 37-138 (260)
27 3ofk_A Nodulation protein S; N 89.1 3.9 0.00013 36.8 11.8 102 203-326 51-153 (216)
28 3lcv_B Sisomicin-gentamicin re 88.9 0.96 3.3E-05 44.8 7.8 126 204-354 133-258 (281)
29 3reo_A (ISO)eugenol O-methyltr 88.6 1.5 5.1E-05 44.1 9.2 98 203-328 203-302 (368)
30 3gu3_A Methyltransferase; alph 88.4 13 0.00046 35.1 15.6 103 203-326 22-125 (284)
31 3fzg_A 16S rRNA methylase; met 87.6 1.3 4.4E-05 41.8 7.4 101 204-327 50-152 (200)
32 3sm3_A SAM-dependent methyltra 87.4 3.5 0.00012 37.2 10.3 103 204-326 31-140 (235)
33 1tw3_A COMT, carminomycin 4-O- 87.3 6.3 0.00021 38.8 12.8 114 188-328 173-290 (360)
34 3thr_A Glycine N-methyltransfe 87.3 2.7 9.3E-05 39.9 9.8 119 188-326 47-174 (293)
35 3giw_A Protein of unknown func 86.9 1.2 4.1E-05 43.9 7.1 147 167-326 43-199 (277)
36 1ve3_A Hypothetical protein PH 86.8 8 0.00027 34.7 12.3 100 204-326 39-141 (227)
37 2vdw_A Vaccinia virus capping 86.3 2.2 7.5E-05 41.9 8.7 113 204-326 49-168 (302)
38 3hnr_A Probable methyltransfer 86.1 6.2 0.00021 35.4 11.2 111 186-326 33-144 (220)
39 3m70_A Tellurite resistance pr 85.7 11 0.00039 35.5 13.3 111 187-326 109-222 (286)
40 1y8c_A S-adenosylmethionine-de 85.4 15 0.0005 33.2 13.5 117 187-327 24-142 (246)
41 3l8d_A Methyltransferase; stru 84.7 8.2 0.00028 35.1 11.4 112 188-327 41-153 (242)
42 3u81_A Catechol O-methyltransf 84.6 23 0.00078 32.1 14.9 106 204-329 59-172 (221)
43 3pfg_A N-methyltransferase; N, 84.1 5.9 0.0002 36.9 10.3 98 204-326 51-150 (263)
44 3lst_A CALO1 methyltransferase 83.7 6.7 0.00023 38.7 11.0 110 188-327 174-287 (348)
45 3g5l_A Putative S-adenosylmeth 82.9 5.6 0.00019 36.7 9.5 100 203-326 44-144 (253)
46 3ou2_A SAM-dependent methyltra 82.6 6 0.00021 35.2 9.3 111 187-326 34-145 (218)
47 2xvm_A Tellurite resistance pr 82.3 17 0.00059 31.6 12.1 110 187-324 21-133 (199)
48 1xtp_A LMAJ004091AAA; SGPP, st 82.2 5.2 0.00018 36.7 9.0 104 203-327 93-197 (254)
49 3g5t_A Trans-aconitate 3-methy 81.8 5.7 0.0002 38.0 9.4 107 203-325 36-147 (299)
50 3bgv_A MRNA CAP guanine-N7 met 81.8 12 0.0004 36.1 11.7 112 203-326 34-154 (313)
51 3f4k_A Putative methyltransfer 81.5 12 0.00043 34.3 11.3 129 171-326 18-149 (257)
52 3mq2_A 16S rRNA methyltransfer 81.4 3.5 0.00012 37.3 7.3 107 203-326 27-139 (218)
53 3vc1_A Geranyl diphosphate 2-C 81.4 10 0.00035 36.5 11.1 100 203-325 117-219 (312)
54 3frh_A 16S rRNA methylase; met 81.3 6.8 0.00023 38.1 9.5 101 204-327 106-206 (253)
55 2o57_A Putative sarcosine dime 81.2 11 0.00037 35.8 11.1 103 203-325 82-185 (297)
56 2p7i_A Hypothetical protein; p 81.2 5.3 0.00018 36.2 8.5 108 188-326 31-140 (250)
57 3kkz_A Uncharacterized protein 81.0 12 0.00042 34.8 11.2 131 169-326 16-149 (267)
58 3i53_A O-methyltransferase; CO 80.0 6.3 0.00022 38.4 9.1 104 204-327 170-275 (332)
59 3g07_A 7SK snRNA methylphospha 79.7 2.8 9.7E-05 40.4 6.4 47 204-259 47-93 (292)
60 1kpg_A CFA synthase;, cyclopro 79.4 9.7 0.00033 35.9 10.0 100 203-325 64-166 (287)
61 3p9n_A Possible methyltransfer 79.1 18 0.00061 31.8 11.2 108 204-332 45-158 (189)
62 4azs_A Methyltransferase WBDD; 78.9 3.7 0.00013 43.9 7.5 88 203-307 66-153 (569)
63 1wzn_A SAM-dependent methyltra 78.5 16 0.00054 33.5 11.0 102 204-327 42-145 (252)
64 3hem_A Cyclopropane-fatty-acyl 77.5 10 0.00036 36.1 9.7 102 203-326 72-182 (302)
65 3d2l_A SAM-dependent methyltra 76.8 15 0.00053 33.2 10.2 102 204-327 34-137 (243)
66 4hg2_A Methyltransferase type 76.1 23 0.00079 33.7 11.6 92 205-325 41-133 (257)
67 4dcm_A Ribosomal RNA large sub 76.0 9.9 0.00034 38.4 9.4 124 186-327 210-334 (375)
68 3bus_A REBM, methyltransferase 75.9 14 0.00049 34.2 10.0 101 203-325 61-164 (273)
69 2ex4_A Adrenal gland protein A 75.8 11 0.00037 34.7 8.9 101 204-325 80-183 (241)
70 1xj5_A Spermidine synthase 1; 75.1 16 0.00054 36.5 10.5 134 204-352 121-257 (334)
71 3bxo_A N,N-dimethyltransferase 75.0 9.8 0.00034 34.4 8.3 99 203-326 40-140 (239)
72 1xxl_A YCGJ protein; structura 74.5 51 0.0017 30.0 15.2 101 203-325 21-122 (239)
73 3ccf_A Cyclopropane-fatty-acyl 74.0 18 0.00061 34.0 10.2 107 188-327 47-154 (279)
74 2p8j_A S-adenosylmethionine-de 73.1 39 0.0013 29.6 11.8 103 204-326 24-127 (209)
75 3g2m_A PCZA361.24; SAM-depende 72.6 7.2 0.00025 37.2 7.1 117 187-327 72-190 (299)
76 1nkv_A Hypothetical protein YJ 71.9 30 0.001 31.6 11.0 122 176-325 14-138 (256)
77 1ri5_A MRNA capping enzyme; me 70.7 18 0.00063 33.8 9.4 105 203-326 64-173 (298)
78 2fk8_A Methoxy mycolic acid sy 70.4 21 0.00072 34.2 9.9 100 203-325 90-192 (318)
79 3lcc_A Putative methyl chlorid 68.7 29 0.001 31.4 10.1 116 186-325 52-169 (235)
80 4htf_A S-adenosylmethionine-de 67.9 20 0.00069 33.6 9.0 101 203-326 68-172 (285)
81 1fp2_A Isoflavone O-methyltran 67.6 8.8 0.0003 37.8 6.6 97 204-328 189-290 (352)
82 2pjd_A Ribosomal RNA small sub 67.4 8.9 0.00031 37.9 6.6 116 186-326 184-302 (343)
83 3bwc_A Spermidine synthase; SA 66.4 26 0.00089 34.0 9.7 112 204-328 96-211 (304)
84 2pt6_A Spermidine synthase; tr 66.3 15 0.0005 36.3 7.9 136 204-354 117-254 (321)
85 2o07_A Spermidine synthase; st 65.7 23 0.00078 34.6 9.1 137 204-355 96-234 (304)
86 3iv6_A Putative Zn-dependent a 65.0 14 0.00047 35.7 7.2 102 203-326 45-147 (261)
87 2yqz_A Hypothetical protein TT 64.9 29 0.00099 31.7 9.3 101 203-326 39-140 (263)
88 3r0q_C Probable protein argini 64.7 16 0.00054 36.7 8.0 134 203-357 63-206 (376)
89 3i9f_A Putative type 11 methyl 64.5 33 0.0011 29.2 9.0 94 203-326 17-111 (170)
90 4e2x_A TCAB9; kijanose, tetron 63.5 6.9 0.00024 39.4 5.0 100 203-326 107-207 (416)
91 3ggd_A SAM-dependent methyltra 63.4 7 0.00024 35.9 4.7 101 204-327 57-164 (245)
92 1zg3_A Isoflavanone 4'-O-methy 63.3 19 0.00065 35.4 8.1 97 204-328 194-295 (358)
93 1inl_A Spermidine synthase; be 62.5 29 0.001 33.5 9.2 135 204-355 91-230 (296)
94 3dli_A Methyltransferase; PSI- 62.0 9 0.00031 35.1 5.1 94 204-326 42-139 (240)
95 1g6q_1 HnRNP arginine N-methyl 61.9 33 0.0011 33.5 9.6 101 204-326 39-144 (328)
96 2kw5_A SLR1183 protein; struct 61.6 82 0.0028 27.4 12.0 97 206-327 32-131 (202)
97 1yzh_A TRNA (guanine-N(7)-)-me 60.7 49 0.0017 29.6 9.9 109 204-327 42-156 (214)
98 3eey_A Putative rRNA methylase 59.4 39 0.0013 29.6 8.8 107 204-326 23-138 (197)
99 2pxx_A Uncharacterized protein 59.1 38 0.0013 29.7 8.7 45 203-257 42-86 (215)
100 2ift_A Putative methylase HI07 58.5 79 0.0027 28.1 10.8 104 205-331 55-167 (201)
101 2i7c_A Spermidine synthase; tr 58.2 30 0.001 33.2 8.3 134 204-354 79-216 (283)
102 3tr6_A O-methyltransferase; ce 57.8 40 0.0014 30.2 8.7 101 204-327 65-174 (225)
103 1iy9_A Spermidine synthase; ro 57.8 40 0.0014 32.2 9.1 136 204-355 76-214 (275)
104 2y1w_A Histone-arginine methyl 57.8 31 0.0011 34.0 8.6 112 188-326 40-154 (348)
105 3p2e_A 16S rRNA methylase; met 57.7 23 0.00079 32.7 7.2 108 204-325 25-137 (225)
106 3e8s_A Putative SAM dependent 57.3 98 0.0034 27.1 11.2 110 185-327 39-152 (227)
107 3q7e_A Protein arginine N-meth 56.8 26 0.00089 34.7 7.8 104 204-327 67-173 (349)
108 2a14_A Indolethylamine N-methy 56.6 34 0.0012 32.0 8.3 45 203-257 55-99 (263)
109 2esr_A Methyltransferase; stru 56.1 35 0.0012 29.3 7.8 106 204-332 32-143 (177)
110 3b3j_A Histone-arginine methyl 55.0 14 0.00047 38.8 5.7 113 188-327 148-263 (480)
111 3lpm_A Putative methyltransfer 54.5 71 0.0024 29.6 10.1 106 204-326 50-175 (259)
112 1zx0_A Guanidinoacetate N-meth 54.4 93 0.0032 28.1 10.8 104 203-325 60-168 (236)
113 3cgg_A SAM-dependent methyltra 54.4 81 0.0028 26.8 9.8 107 188-326 37-146 (195)
114 3orh_A Guanidinoacetate N-meth 54.2 92 0.0031 28.6 10.8 101 204-324 61-167 (236)
115 3ckk_A TRNA (guanine-N(7)-)-me 53.5 24 0.00082 32.9 6.6 48 203-259 46-93 (235)
116 3adn_A Spermidine synthase; am 53.5 43 0.0015 32.5 8.7 136 204-355 84-223 (294)
117 3mti_A RRNA methylase; SAM-dep 53.3 94 0.0032 26.7 10.2 45 204-259 23-67 (185)
118 3uwp_A Histone-lysine N-methyl 52.9 57 0.0019 34.1 9.7 107 203-326 173-287 (438)
119 2fpo_A Methylase YHHF; structu 52.5 69 0.0024 28.6 9.4 102 205-329 56-162 (202)
120 1fbn_A MJ fibrillarin homologu 51.9 43 0.0015 30.5 8.0 99 204-326 75-177 (230)
121 3hm2_A Precorrin-6Y C5,15-meth 50.3 32 0.0011 29.3 6.5 46 203-257 25-70 (178)
122 3bkw_A MLL3908 protein, S-aden 49.6 54 0.0018 29.4 8.2 111 187-326 32-143 (243)
123 3dmg_A Probable ribosomal RNA 49.3 56 0.0019 33.0 9.0 122 186-327 215-340 (381)
124 3duw_A OMT, O-methyltransferas 48.5 74 0.0025 28.4 8.9 101 204-327 59-167 (223)
125 3lbf_A Protein-L-isoaspartate 48.4 71 0.0024 28.1 8.7 96 203-326 77-173 (210)
126 1dl5_A Protein-L-isoaspartate 48.2 66 0.0022 31.0 9.0 98 203-326 75-174 (317)
127 1pjz_A Thiopurine S-methyltran 47.6 27 0.00092 31.4 5.7 42 204-256 23-64 (203)
128 3grz_A L11 mtase, ribosomal pr 46.9 45 0.0015 29.4 7.1 62 183-257 43-104 (205)
129 2g72_A Phenylethanolamine N-me 46.8 38 0.0013 31.9 6.9 44 204-257 72-115 (289)
130 1uir_A Polyamine aminopropyltr 46.3 72 0.0025 31.0 9.0 110 204-326 78-194 (314)
131 2qn6_B Translation initiation 46.3 33 0.0011 28.1 5.5 38 233-271 50-91 (93)
132 2fyt_A Protein arginine N-meth 46.2 86 0.0029 30.8 9.7 98 204-324 65-168 (340)
133 1dus_A MJ0882; hypothetical pr 45.7 1.4E+02 0.0047 25.3 10.1 116 186-329 40-159 (194)
134 1af7_A Chemotaxis receptor met 45.4 57 0.002 31.4 8.0 118 204-327 106-252 (274)
135 1fp1_D Isoliquiritigenin 2'-O- 44.7 51 0.0017 32.5 7.7 108 188-327 198-307 (372)
136 2fhp_A Methylase, putative; al 42.8 96 0.0033 26.4 8.4 105 204-331 45-158 (187)
137 3e05_A Precorrin-6Y C5,15-meth 42.5 33 0.0011 30.4 5.4 48 203-259 40-87 (204)
138 2p35_A Trans-aconitate 2-methy 42.5 64 0.0022 29.3 7.6 98 204-327 34-132 (259)
139 2gs9_A Hypothetical protein TT 41.8 69 0.0024 28.1 7.5 92 204-326 37-131 (211)
140 3njr_A Precorrin-6Y methylase; 41.6 1.6E+02 0.0056 26.2 10.1 104 189-326 46-153 (204)
141 2gb4_A Thiopurine S-methyltran 41.6 63 0.0021 30.4 7.5 104 203-323 68-187 (252)
142 2avd_A Catechol-O-methyltransf 41.1 1.2E+02 0.0042 26.9 9.2 46 204-257 70-115 (229)
143 2fca_A TRNA (guanine-N(7)-)-me 40.7 32 0.0011 31.1 5.2 46 204-258 39-84 (213)
144 2i62_A Nicotinamide N-methyltr 40.5 79 0.0027 28.7 7.9 45 203-257 56-100 (265)
145 2nxc_A L11 mtase, ribosomal pr 40.2 48 0.0016 31.0 6.4 113 183-325 103-216 (254)
146 3ege_A Putative methyltransfer 40.2 40 0.0014 31.3 5.8 37 203-250 34-70 (261)
147 3fut_A Dimethyladenosine trans 40.1 41 0.0014 32.5 6.0 110 167-298 11-122 (271)
148 3cc8_A Putative methyltransfer 39.2 1E+02 0.0035 27.0 8.3 95 203-326 32-129 (230)
149 3tfw_A Putative O-methyltransf 38.4 1.2E+02 0.004 28.0 8.8 101 204-327 64-170 (248)
150 2b2c_A Spermidine synthase; be 38.2 65 0.0022 31.6 7.2 134 204-354 109-246 (314)
151 2hnk_A SAM-dependent O-methylt 38.1 1.2E+02 0.0041 27.5 8.7 47 204-258 61-107 (239)
152 1o9g_A RRNA methyltransferase; 36.2 49 0.0017 30.4 5.7 48 203-257 51-98 (250)
153 2avn_A Ubiquinone/menaquinone 35.9 98 0.0033 28.5 7.8 96 204-326 55-151 (260)
154 4dzr_A Protein-(glutamine-N5) 35.2 39 0.0013 29.5 4.6 45 203-256 30-74 (215)
155 1r18_A Protein-L-isoaspartate( 34.8 47 0.0016 30.0 5.3 53 204-259 85-137 (227)
156 1mjf_A Spermidine synthase; sp 34.0 94 0.0032 29.5 7.5 110 204-328 76-194 (281)
157 1ws6_A Methyltransferase; stru 33.8 70 0.0024 26.8 5.9 102 204-330 42-150 (171)
158 2vdv_E TRNA (guanine-N(7)-)-me 33.2 81 0.0028 28.9 6.7 48 203-259 49-96 (246)
159 1xdz_A Methyltransferase GIDB; 33.2 45 0.0016 30.5 4.9 96 204-326 71-173 (240)
160 2yxd_A Probable cobalt-precorr 33.1 66 0.0023 27.1 5.7 95 203-326 35-130 (183)
161 1wy7_A Hypothetical protein PH 33.0 1.1E+02 0.0036 26.9 7.2 74 204-297 50-123 (207)
162 3tma_A Methyltransferase; thum 32.7 1.3E+02 0.0046 29.2 8.6 101 204-320 204-310 (354)
163 3dxy_A TRNA (guanine-N(7)-)-me 32.2 53 0.0018 30.1 5.2 110 204-328 35-151 (218)
164 2qm3_A Predicted methyltransfe 31.8 2.9E+02 0.0098 27.2 10.9 92 204-320 173-270 (373)
165 1l3i_A Precorrin-6Y methyltran 30.8 86 0.0029 26.6 6.1 45 203-258 33-77 (192)
166 3gru_A Dimethyladenosine trans 30.1 1.6E+02 0.0054 28.6 8.5 104 175-298 22-126 (295)
167 3id6_C Fibrillarin-like rRNA/T 30.0 2.2E+02 0.0075 26.6 9.2 100 204-326 77-180 (232)
168 1uwv_A 23S rRNA (uracil-5-)-me 29.5 2.1E+02 0.0071 29.0 9.6 97 204-326 287-388 (433)
169 2pbf_A Protein-L-isoaspartate 29.1 63 0.0022 28.9 5.1 65 188-259 68-132 (227)
170 2ksn_A Ubiquitin domain-contai 27.6 67 0.0023 28.3 4.6 39 89-128 54-92 (137)
171 3cbg_A O-methyltransferase; cy 27.6 2.2E+02 0.0076 25.7 8.7 47 204-258 73-119 (232)
172 1sui_A Caffeoyl-COA O-methyltr 27.1 1.7E+02 0.0057 27.1 7.8 101 204-327 80-190 (247)
173 1u2z_A Histone-lysine N-methyl 26.7 1.3E+02 0.0045 31.0 7.5 106 203-326 242-358 (433)
174 1zq9_A Probable dimethyladenos 26.7 68 0.0023 30.7 5.0 62 183-256 9-70 (285)
175 1qam_A ERMC' methyltransferase 26.7 66 0.0022 30.0 4.8 62 183-256 11-72 (244)
176 1vlm_A SAM-dependent methyltra 26.6 2E+02 0.0068 25.4 8.0 88 204-326 48-138 (219)
177 1jsx_A Glucose-inhibited divis 26.5 1.2E+02 0.004 26.5 6.3 96 204-326 66-164 (207)
178 3c3p_A Methyltransferase; NP_9 26.4 93 0.0032 27.5 5.6 99 204-327 57-160 (210)
179 3gjy_A Spermidine synthase; AP 25.9 1.5E+02 0.005 29.4 7.4 109 203-327 89-200 (317)
180 2frn_A Hypothetical protein PH 25.9 4.1E+02 0.014 24.8 10.9 43 205-257 127-169 (278)
181 3tm4_A TRNA (guanine N2-)-meth 25.6 1.5E+02 0.0052 29.4 7.6 104 203-325 217-329 (373)
182 2jjq_A Uncharacterized RNA met 25.5 5.4E+02 0.018 26.0 12.6 96 204-326 291-386 (425)
183 2ozv_A Hypothetical protein AT 25.3 69 0.0024 30.0 4.7 112 203-327 36-170 (260)
184 3c3y_A Pfomt, O-methyltransfer 25.0 2.4E+02 0.0082 25.6 8.4 47 204-258 71-117 (237)
185 3mb5_A SAM-dependent methyltra 24.9 73 0.0025 29.1 4.7 49 203-259 93-141 (255)
186 3gdh_A Trimethylguanosine synt 24.7 1.5E+02 0.0051 26.6 6.8 43 204-257 79-121 (241)
187 2b25_A Hypothetical protein; s 24.6 1.1E+02 0.0036 29.6 6.1 73 175-260 82-154 (336)
188 3g89_A Ribosomal RNA small sub 24.4 84 0.0029 29.4 5.1 45 204-257 81-125 (249)
189 3tqs_A Ribosomal RNA small sub 24.4 80 0.0027 30.0 5.0 43 204-257 30-72 (255)
190 3q87_B N6 adenine specific DNA 22.9 1.4E+02 0.0047 25.7 6.0 35 205-251 25-59 (170)
191 2yxe_A Protein-L-isoaspartate 22.9 1.1E+02 0.0038 26.9 5.5 48 203-258 77-124 (215)
192 3m33_A Uncharacterized protein 21.4 90 0.0031 28.1 4.5 41 204-255 49-89 (226)
193 3v4y_B Nuclear inhibitor of pr 21.1 19 0.00064 27.6 -0.2 12 28-40 39-50 (62)
194 4hc4_A Protein arginine N-meth 21.0 1.6E+02 0.0054 29.8 6.6 100 206-325 86-187 (376)
195 2gpy_A O-methyltransferase; st 20.5 3.9E+02 0.013 23.7 8.8 99 204-326 55-159 (233)
196 1i9g_A Hypothetical protein RV 20.0 1.3E+02 0.0043 27.8 5.4 59 188-259 89-147 (280)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.51 E-value=0.00028 Score=68.79 Aligned_cols=107 Identities=15% Similarity=0.202 Sum_probs=69.1
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-+|+|+|.|.| .+...|+.+ .++|..+||||+.+.+.++.+.+++.++-.. .+.+|. .. ++..+.
T Consensus 71 ~~~vLDlGcGtG----~~~~~la~~---~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~---~~v~~~--~~--D~~~~~ 136 (261)
T 4gek_A 71 GTQVYDLGCSLG----AATLSVRRN---IHHDNCKIIAIDNSPAMIERCRRHIDAYKAP---TPVDVI--EG--DIRDIA 136 (261)
T ss_dssp TCEEEEETCTTT----HHHHHHHHT---CCSSSCEEEEEESCHHHHHHHHHHHHTSCCS---SCEEEE--ES--CTTTCC
T ss_pred CCEEEEEeCCCC----HHHHHHHHh---cCCCCCEEEEEECCHHHHHHHHHHHHhhccC---ceEEEe--ec--cccccc
Confidence 468999999999 345567765 3456789999999999999888887654332 244543 22 222333
Q ss_pred CCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEE-Eee
Q 041748 284 KKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTL-VEQ 327 (479)
Q Consensus 284 ~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtl-vE~ 327 (479)
..+-.+++.| +.|||+.+. .+..+|+.| +.|+|.-..+ .|.
T Consensus 137 ~~~~d~v~~~--~~l~~~~~~-~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 137 IENASMVVLN--FTLQFLEPS-ERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp CCSEEEEEEE--SCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccccceee--eeeeecCch-hHhHHHHHHHHHcCCCcEEEEEec
Confidence 4333455444 457888653 445677766 6799986544 443
No 2
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.01 E-value=0.027 Score=52.11 Aligned_cols=178 Identities=10% Similarity=0.032 Sum_probs=92.2
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV 267 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp 267 (479)
+.+++.+... .+...|+|+|.|.|. +...|+.+ . |..++|||+.+...++.+.+++. ..+++
T Consensus 33 ~~~~~~~~~~----~~~~~vLDiG~G~G~----~~~~l~~~--~---~~~~v~~vD~s~~~~~~a~~~~~----~~~~~- 94 (234)
T 3dtn_A 33 GVSVSIASVD----TENPDILDLGAGTGL----LSAFLMEK--Y---PEATFTLVDMSEKMLEIAKNRFR----GNLKV- 94 (234)
T ss_dssp HHHHHTCCCS----CSSCEEEEETCTTSH----HHHHHHHH--C---TTCEEEEEESCHHHHHHHHHHTC----SCTTE-
T ss_pred HHHHHHhhcC----CCCCeEEEecCCCCH----HHHHHHHh--C---CCCeEEEEECCHHHHHHHHHhhc----cCCCE-
Confidence 4555555421 246899999999993 45556665 1 34789999998887777665542 22223
Q ss_pred EEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEeecCCCCCCchhHHHHHHHHH
Q 041748 268 FEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQEGSRSPRNFLSRFMESLHY 346 (479)
Q Consensus 268 FeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ea~~ns~~F~~RF~eaL~y 346 (479)
+|. ..+. ..+... +..=+|-|...|||+.+. ....+|+.+ +.|+|.-.+++-.-...+.+.+...+...
T Consensus 95 -~~~--~~d~--~~~~~~-~~fD~v~~~~~l~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~--- 164 (234)
T 3dtn_A 95 -KYI--EADY--SKYDFE-EKYDMVVSALSIHHLEDE-DKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTI--- 164 (234)
T ss_dssp -EEE--ESCT--TTCCCC-SCEEEEEEESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHH---
T ss_pred -EEE--eCch--hccCCC-CCceEEEEeCccccCCHH-HHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHH---
Confidence 332 2222 112122 333333344568898654 334566555 56899866655432222333222222221
Q ss_pred HHHHhhhhhhcCCCCChHHHHHHHHHHhHHHHhhhhcCCCCCCCCCCccccccchhHHHHHHHcCCCccccC
Q 041748 347 FAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYERMETWKARMESHEFGGIKM 418 (479)
Q Consensus 347 YsalFDSLda~lp~~s~eR~~iEr~~lg~eI~niVa~eg~~~g~~~~R~ERhE~~~~W~~rm~~AGF~~v~l 418 (479)
+...+.. ..++ . .++.+.... ....+.-+.+.|...|+.|||+.+.+
T Consensus 165 ~~~~~~~--~~~~---~-----------~~~~~~~~~---------~~~~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 165 WRQYVEN--SGLT---E-----------EEIAAGYER---------SKLDKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp HHHHHHT--SSCC---H-----------HHHHTTC-------------CCCCCBHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHh--cCCC---H-----------HHHHHHHHh---------cccccccCHHHHHHHHHHcCCCceee
Confidence 1111111 1111 1 112222111 12344567889999999999987753
No 3
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=94.41 E-value=0.33 Score=48.70 Aligned_cols=117 Identities=17% Similarity=0.126 Sum_probs=65.7
Q ss_pred HHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe
Q 041748 187 NQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL 266 (479)
Q Consensus 187 NqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv 266 (479)
.+.|++++.-. ..-+|+|+|-|.|. ++.+|+.+. |.+|+|.++.+ ..++.+.+++. . ...+
T Consensus 168 ~~~~~~~~~~~-----~~~~v~DvGgG~G~----~~~~l~~~~-----p~~~~~~~dlp-~v~~~a~~~~~-~-~~~~-- 228 (353)
T 4a6d_A 168 GRSVLTAFDLS-----VFPLMCDLGGGAGA----LAKECMSLY-----PGCKITVFDIP-EVVWTAKQHFS-F-QEEE-- 228 (353)
T ss_dssp HHHHHHSSCGG-----GCSEEEEETCTTSH----HHHHHHHHC-----SSCEEEEEECH-HHHHHHHHHSC-C---CC--
T ss_pred HHHHHHhcCcc-----cCCeEEeeCCCCCH----HHHHHHHhC-----CCceeEeccCH-HHHHHHHHhhh-h-cccC--
Confidence 45667665432 34589999999993 567788772 47899988763 34444443332 1 1112
Q ss_pred eEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcE-EEEEeecC
Q 041748 267 VFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTI-VTLVEQEG 329 (479)
Q Consensus 267 pFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~V-vtlvE~ea 329 (479)
..+|.. .+. ....+...+++....+ ||+.+|+. ...+|+.+ +.|+|.- ++|+|.-.
T Consensus 229 rv~~~~--gD~--~~~~~~~~D~~~~~~v--lh~~~d~~-~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 229 QIDFQE--GDF--FKDPLPEADLYILARV--LHDWADGK-CSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp SEEEEE--SCT--TTSCCCCCSEEEEESS--GGGSCHHH-HHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred ceeeec--Ccc--ccCCCCCceEEEeeee--cccCCHHH-HHHHHHHHHhhCCCCCEEEEEEeee
Confidence 234432 111 1111233455555444 78887753 34566666 5799964 55666543
No 4
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.15 E-value=0.33 Score=55.02 Aligned_cols=121 Identities=14% Similarity=0.143 Sum_probs=75.3
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHH--hhcCC
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFS--KSFRN 265 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA--~~lgn 265 (479)
+.|++.+... +.-.|+|+|.|.| .+...|+.+ ++|.-+||||+.+...++.+.++|.... +..+
T Consensus 711 e~LLelL~~~-----~g~rVLDVGCGTG----~lai~LAr~----g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~g- 776 (950)
T 3htx_A 711 EYALKHIRES-----SASTLVDFGCGSG----SLLDSLLDY----PTSLQTIIGVDISPKGLARAAKMLHVKLNKEACN- 776 (950)
T ss_dssp HHHHHHHHHS-----CCSEEEEETCSSS----HHHHHHTSS----CCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSS-
T ss_pred HHHHHHhccc-----CCCEEEEECCCCC----HHHHHHHHh----CCCCCeEEEEECCHHHHHHHHHHhhhccchhhcC-
Confidence 3455555542 3568999999999 456667766 3456799999999999999988887652 2333
Q ss_pred ee-EEEEEeeccceeccccCCCC--cEEEEeeccccccccchhhhHHHHHH-hHccCCcEEEEEeecC
Q 041748 266 LV-FEFQGLIRGSRLVNIRKKKH--ETVAANLVFHLNTLKIYLKISDTLNL-VRSIKPTIVTLVEQEG 329 (479)
Q Consensus 266 vp-FeF~~v~~~~~l~~L~~~~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~-Ir~L~P~VvtlvE~ea 329 (479)
++ .+|. ..+. ..+....+ ++|+. ...+||+.+. ....+|+. .+-|+|.++++.....
T Consensus 777 l~nVefi--qGDa--~dLp~~d~sFDlVV~--~eVLeHL~dp-~l~~~L~eI~RvLKPG~LIISTPN~ 837 (950)
T 3htx_A 777 VKSATLY--DGSI--LEFDSRLHDVDIGTC--LEVIEHMEED-QACEFGEKVLSLFHPKLLIVSTPNY 837 (950)
T ss_dssp CSEEEEE--ESCT--TSCCTTSCSCCEEEE--ESCGGGSCHH-HHHHHHHHHHHTTCCSEEEEEECBG
T ss_pred CCceEEE--ECch--HhCCcccCCeeEEEE--eCchhhCChH-HHHHHHHHHHHHcCCCEEEEEecCc
Confidence 32 3332 2222 22222222 34444 4458898764 33455554 5789999777766543
No 5
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=94.01 E-value=0.83 Score=41.38 Aligned_cols=114 Identities=16% Similarity=0.153 Sum_probs=66.8
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV 267 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp 267 (479)
+.|++.+.-. +.-.|+|+|.|.|. +...|+.+ ++|..++|||+.+...++.+.+++... + ++
T Consensus 27 ~~~~~~~~~~-----~~~~vLDiG~G~G~----~~~~l~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~----~-~~ 88 (219)
T 3dh0_A 27 EKVLKEFGLK-----EGMTVLDVGTGAGF----YLPYLSKM----VGEKGKVYAIDVQEEMVNYAWEKVNKL----G-LK 88 (219)
T ss_dssp HHHHHHHTCC-----TTCEEEESSCTTCT----THHHHHHH----HTTTCEEEEEESCHHHHHHHHHHHHHH----T-CT
T ss_pred HHHHHHhCCC-----CCCEEEEEecCCCH----HHHHHHHH----hCCCcEEEEEECCHHHHHHHHHHHHHc----C-CC
Confidence 5667766432 45689999999984 34445554 123569999999988888877776543 2 32
Q ss_pred -EEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 268 -FEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 268 -FeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.+|. ..+. ..+....+..=+|-+...+||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 89 ~~~~~--~~d~--~~~~~~~~~fD~v~~~~~l~~~~~---~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 89 NVEVL--KSEE--NKIPLPDNTVDFIFMAFTFHELSE---PLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp TEEEE--ECBT--TBCSSCSSCEEEEEEESCGGGCSS---HHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEE--eccc--ccCCCCCCCeeEEEeehhhhhcCC---HHHHHHHHHHHhCCCeEEEEE
Confidence 3332 2221 122233332333334455788854 24555544 668997665553
No 6
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=93.95 E-value=0.77 Score=45.98 Aligned_cols=105 Identities=11% Similarity=0.064 Sum_probs=60.3
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe--eEEEEEeeccceec
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL--VFEFQGLIRGSRLV 280 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv--pFeF~~v~~~~~l~ 280 (479)
..-+|+|+|.|.|. +...|+.+. |.+++|+++. ...++.+.+++.+ .| + ..+|.. .+..-.
T Consensus 179 ~~~~vlDvG~G~G~----~~~~l~~~~-----p~~~~~~~D~-~~~~~~a~~~~~~----~~-~~~~v~~~~--~d~~~~ 241 (363)
T 3dp7_A 179 HPKRLLDIGGNTGK----WATQCVQYN-----KEVEVTIVDL-PQQLEMMRKQTAG----LS-GSERIHGHG--ANLLDR 241 (363)
T ss_dssp CCSEEEEESCTTCH----HHHHHHHHS-----TTCEEEEEEC-HHHHHHHHHHHTT----CT-TGGGEEEEE--CCCCSS
T ss_pred CCCEEEEeCCCcCH----HHHHHHHhC-----CCCEEEEEeC-HHHHHHHHHHHHh----cC-cccceEEEE--cccccc
Confidence 35799999999993 456677661 3579999997 6666666555432 33 2 244432 221100
Q ss_pred cccC-CCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEE-EEee
Q 041748 281 NIRK-KKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVT-LVEQ 327 (479)
Q Consensus 281 ~L~~-~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvt-lvE~ 327 (479)
.+.+ ..-++++.+. -||++.++ ....+|+.+ +.|+|.-.+ ++|.
T Consensus 242 ~~~~p~~~D~v~~~~--vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 242 DVPFPTGFDAVWMSQ--FLDCFSEE-EVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp SCCCCCCCSEEEEES--CSTTSCHH-HHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCCCCCcCEEEEec--hhhhCCHH-HHHHHHHHHHHhcCCCcEEEEEee
Confidence 0011 2234555544 47888765 345667666 568997644 5553
No 7
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=93.72 E-value=0.7 Score=45.97 Aligned_cols=117 Identities=8% Similarity=-0.033 Sum_probs=69.0
Q ss_pred HHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe
Q 041748 187 NQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL 266 (479)
Q Consensus 187 NqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv 266 (479)
.+.|++.+.- .+.-+|+|+|.|.|. +...|+.+. |.+++|+++. ...++.+.+++.+.. +.+
T Consensus 179 ~~~l~~~~~~-----~~~~~vLDvG~G~G~----~~~~l~~~~-----p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~- 240 (359)
T 1x19_A 179 IQLLLEEAKL-----DGVKKMIDVGGGIGD----ISAAMLKHF-----PELDSTILNL-PGAIDLVNENAAEKG--VAD- 240 (359)
T ss_dssp HHHHHHHCCC-----TTCCEEEEESCTTCH----HHHHHHHHC-----TTCEEEEEEC-GGGHHHHHHHHHHTT--CTT-
T ss_pred HHHHHHhcCC-----CCCCEEEEECCcccH----HHHHHHHHC-----CCCeEEEEec-HHHHHHHHHHHHhcC--CCC-
Confidence 3566666642 245799999999994 455666651 3579999998 777777776665321 221
Q ss_pred eEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEE-EEeec
Q 041748 267 VFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVT-LVEQE 328 (479)
Q Consensus 267 pFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvt-lvE~e 328 (479)
..+|.. .+. ..+.+..+++++.+.+ ||++.++ ....+|+.+ +.|+|.-.+ ++|..
T Consensus 241 ~v~~~~--~d~--~~~~~~~~D~v~~~~v--lh~~~d~-~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 241 RMRGIA--VDI--YKESYPEADAVLFCRI--LYSANEQ-LSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp TEEEEE--CCT--TTSCCCCCSEEEEESC--GGGSCHH-HHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred CEEEEe--Ccc--ccCCCCCCCEEEEech--hccCCHH-HHHHHHHHHHHhcCCCCEEEEEecc
Confidence 245532 221 1122333456655544 7888664 345666665 568987544 66643
No 8
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=93.63 E-value=0.62 Score=43.90 Aligned_cols=121 Identities=16% Similarity=0.062 Sum_probs=66.8
Q ss_pred HHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChH------HHHHHHHHHHHHHhh
Q 041748 189 AILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIE------ELQETENRLVSFSKS 262 (479)
Q Consensus 189 AILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~------~l~etg~rL~~fA~~ 262 (479)
.|++.+.-. +.-+|+|+|.|.|. +...|+.+ .+ |..++|||+.+.. .++.+.+++..
T Consensus 34 ~l~~~~~~~-----~~~~vLDiGcG~G~----~~~~l~~~---~g-~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~---- 96 (275)
T 3bkx_A 34 AIAEAWQVK-----PGEKILEIGCGQGD----LSAVLADQ---VG-SSGHVTGIDIASPDYGAPLTLGQAWNHLLA---- 96 (275)
T ss_dssp HHHHHHTCC-----TTCEEEEESCTTSH----HHHHHHHH---HC-TTCEEEEECSSCTTCCSSSCHHHHHHHHHT----
T ss_pred HHHHHcCCC-----CCCEEEEeCCCCCH----HHHHHHHH---hC-CCCEEEEEECCccccccHHHHHHHHHHHHh----
Confidence 556655322 35689999999883 34456655 12 3468999997664 56666665543
Q ss_pred cCCe--eEEEEEeeccceeccccCCC--CcEEEEeeccccccccchhhhHHHHHHhHccCC--cEEEEEeecCCCCC
Q 041748 263 FRNL--VFEFQGLIRGSRLVNIRKKK--HETVAANLVFHLNTLKIYLKISDTLNLVRSIKP--TIVTLVEQEGSRSP 333 (479)
Q Consensus 263 lgnv--pFeF~~v~~~~~l~~L~~~~--~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P--~VvtlvE~ea~~ns 333 (479)
.+ + ..+|.... ......+...+ =++|+.+. .|||+.+.. .+++.++.+.| ..+++++.....+.
T Consensus 97 ~~-~~~~v~~~~~d-~~~~~~~~~~~~~fD~v~~~~--~l~~~~~~~---~~~~~~~~l~~~gG~l~~~~~~~~~~~ 166 (275)
T 3bkx_A 97 GP-LGDRLTVHFNT-NLSDDLGPIADQHFDRVVLAH--SLWYFASAN---ALALLFKNMAAVCDHVDVAEWSMQPTA 166 (275)
T ss_dssp ST-TGGGEEEECSC-CTTTCCGGGTTCCCSEEEEES--CGGGSSCHH---HHHHHHHHHTTTCSEEEEEEECSSCSS
T ss_pred cC-CCCceEEEECC-hhhhccCCCCCCCEEEEEEcc--chhhCCCHH---HHHHHHHHHhCCCCEEEEEEecCCCCc
Confidence 22 2 23443221 01111122222 24555444 468887642 47777777776 46667765554333
No 9
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=93.59 E-value=1.4 Score=42.77 Aligned_cols=117 Identities=13% Similarity=0.106 Sum_probs=67.8
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe-
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL- 266 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv- 266 (479)
+.|++.+.... .+..+|+|+|.|.|. +...|+.+. |..++|+++.+ ..++.+.+++.+. + +
T Consensus 153 ~~~~~~~~~~~---~~~~~vlDvG~G~G~----~~~~l~~~~-----p~~~~~~~D~~-~~~~~a~~~~~~~----~-~~ 214 (335)
T 2r3s_A 153 QLIAQLVNENK---IEPLKVLDISASHGL----FGIAVAQHN-----PNAEIFGVDWA-SVLEVAKENARIQ----G-VA 214 (335)
T ss_dssp HHHHHHHTC-----CCCSEEEEETCTTCH----HHHHHHHHC-----TTCEEEEEECH-HHHHHHHHHHHHH----T-CG
T ss_pred HHHHHhccccc---CCCCEEEEECCCcCH----HHHHHHHHC-----CCCeEEEEecH-HHHHHHHHHHHhc----C-CC
Confidence 45666664200 146799999999993 555666661 34799999988 8788777766543 2 3
Q ss_pred -eEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcE-EEEEeec
Q 041748 267 -VFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTI-VTLVEQE 328 (479)
Q Consensus 267 -pFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~V-vtlvE~e 328 (479)
..+|... +. ....+..+ .=+|-|..-||++.++ ....+|+.+ +.|+|.- ++++|..
T Consensus 215 ~~v~~~~~--d~--~~~~~~~~-~D~v~~~~~l~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 215 SRYHTIAG--SA--FEVDYGND-YDLVLLPNFLHHFDVA-TCEQLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp GGEEEEES--CT--TTSCCCSC-EEEEEEESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cceEEEec--cc--ccCCCCCC-CcEEEEcchhccCCHH-HHHHHHHHHHHhCCCCcEEEEEeec
Confidence 2455432 21 11112222 3233344457888654 334566655 5689977 5566644
No 10
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=93.16 E-value=0.69 Score=43.70 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=61.7
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee-EEEEEeeccceecc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV-FEFQGLIRGSRLVN 281 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp-FeF~~v~~~~~l~~ 281 (479)
+.-+|+|+|.|.| .+...|+.+ . |..++|||+.+...++.+.+++.. .+ ++ .+|. ..+ ...
T Consensus 37 ~~~~vLDiG~G~G----~~~~~l~~~--~---~~~~v~~vD~s~~~~~~a~~~~~~----~~-~~~~~~~--~~d--~~~ 98 (276)
T 3mgg_A 37 PGAKVLEAGCGIG----AQTVILAKN--N---PDAEITSIDISPESLEKARENTEK----NG-IKNVKFL--QAN--IFS 98 (276)
T ss_dssp TTCEEEETTCTTS----HHHHHHHHH--C---TTSEEEEEESCHHHHHHHHHHHHH----TT-CCSEEEE--ECC--GGG
T ss_pred CCCeEEEecCCCC----HHHHHHHHh--C---CCCEEEEEECCHHHHHHHHHHHHH----cC-CCCcEEE--Ecc--ccc
Confidence 3568999999998 345566665 1 235899999988877777666543 33 32 3332 222 222
Q ss_pred ccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 282 IRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 282 L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
+...++..=+|-+...|||+.+. ..+|+.+ +-|+|.-++++.
T Consensus 99 ~~~~~~~fD~v~~~~~l~~~~~~---~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 99 LPFEDSSFDHIFVCFVLEHLQSP---EEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp CCSCTTCEEEEEEESCGGGCSCH---HHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCCeeEEEEechhhhcCCH---HHHHHHHHHHcCCCcEEEEE
Confidence 33334434344455567888754 3566555 568998665554
No 11
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=92.54 E-value=1 Score=40.99 Aligned_cols=121 Identities=15% Similarity=0.158 Sum_probs=69.4
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCC--
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRN-- 265 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgn-- 265 (479)
+.|++.+... +.-.|+|+|.|.|. +...|+.+ + |..++|||+.+...++.+.+++... .+++
T Consensus 19 ~~l~~~l~~~-----~~~~vLDiGcG~G~----~~~~l~~~---~--~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~ 82 (219)
T 3jwg_A 19 GTVVAVLKSV-----NAKKVIDLGCGEGN----LLSLLLKD---K--SFEQITGVDVSYSVLERAKDRLKID--RLPEMQ 82 (219)
T ss_dssp HHHHHHHHHT-----TCCEEEEETCTTCH----HHHHHHTS---T--TCCEEEEEESCHHHHHHHHHHHTGG--GSCHHH
T ss_pred HHHHHHHhhc-----CCCEEEEecCCCCH----HHHHHHhc---C--CCCEEEEEECCHHHHHHHHHHHHhh--cccccc
Confidence 4455555442 35689999999994 55666765 2 2479999999988888777765421 1110
Q ss_pred -eeEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEeecC
Q 041748 266 -LVFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQEG 329 (479)
Q Consensus 266 -vpFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ea 329 (479)
-..+|.. .+.....+....=++|+ |...|||+.+. ....+|+.+ +.|+|.-++++....
T Consensus 83 ~~~v~~~~--~d~~~~~~~~~~fD~V~--~~~~l~~~~~~-~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 83 RKRISLFQ--SSLVYRDKRFSGYDAAT--VIEVIEHLDEN-RLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp HTTEEEEE--CCSSSCCGGGTTCSEEE--EESCGGGCCHH-HHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred CcceEEEe--CcccccccccCCCCEEE--EHHHHHhCCHH-HHHHHHHHHHHhhCCCEEEEEccch
Confidence 0233332 22211111112223444 44457888643 345666655 678999877766553
No 12
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=92.31 E-value=1.3 Score=40.11 Aligned_cols=116 Identities=19% Similarity=0.263 Sum_probs=67.8
Q ss_pred HHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe--
Q 041748 189 AILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL-- 266 (479)
Q Consensus 189 AILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv-- 266 (479)
.|++.+... +.-.|+|+|.|.|. +...|+.+ + |..++|||+.+...++.+.+++. ..+ +
T Consensus 20 ~l~~~l~~~-----~~~~vLDiGcG~G~----~~~~l~~~---~--~~~~v~gvD~s~~~~~~a~~~~~----~~~-~~~ 80 (217)
T 3jwh_A 20 GVVAALKQS-----NARRVIDLGCGQGN----LLKILLKD---S--FFEQITGVDVSYRSLEIAQERLD----RLR-LPR 80 (217)
T ss_dssp HHHHHHHHT-----TCCEEEEETCTTCH----HHHHHHHC---T--TCSEEEEEESCHHHHHHHHHHHT----TCC-CCH
T ss_pred HHHHHHHhc-----CCCEEEEeCCCCCH----HHHHHHhh---C--CCCEEEEEECCHHHHHHHHHHHH----Hhc-CCc
Confidence 445555432 35689999999994 55566665 1 24699999999888877776653 222 2
Q ss_pred ----eEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEeec
Q 041748 267 ----VFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQE 328 (479)
Q Consensus 267 ----pFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~e 328 (479)
..+|. ..+..........=++|+.+ ..|||+.+. ....+|+.+ +.|+|.-++++...
T Consensus 81 ~~~~~v~~~--~~d~~~~~~~~~~fD~v~~~--~~l~~~~~~-~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 81 NQWERLQLI--QGALTYQDKRFHGYDAATVI--EVIEHLDLS-RLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp HHHTTEEEE--ECCTTSCCGGGCSCSEEEEE--SCGGGCCHH-HHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ccCcceEEE--eCCcccccccCCCcCEEeeH--HHHHcCCHH-HHHHHHHHHHHHcCCCEEEEEccC
Confidence 24443 22221111111222455544 447888543 445677665 56899987776543
No 13
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=92.04 E-value=1.4 Score=39.32 Aligned_cols=98 Identities=11% Similarity=0.137 Sum_probs=57.9
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++ .+++.| . ..+ ...+.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~---~----~~v~gvD~s~~~~~~a~~~-------~~~~~~--~--~~d--~~~~~ 97 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL---G----HQIEGLEPATRLVELARQT-------HPSVTF--H--HGT--ITDLS 97 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT---T----CCEEEECCCHHHHHHHHHH-------CTTSEE--E--CCC--GGGGG
T ss_pred CCeEEEecCCCCH----HHHHHHhc---C----CeEEEEeCCHHHHHHHHHh-------CCCCeE--E--eCc--ccccc
Confidence 5689999999995 45566665 2 2799999988777666554 222433 2 222 22233
Q ss_pred CCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 284 KKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 284 ~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
..++..=+|-|...|||+..+ ....+|+.+ +.|+|.-.+++.
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~~-~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 98 DSPKRWAGLLAWYSLIHMGPG-ELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp GSCCCEEEEEEESSSTTCCTT-THHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCCeEEEEehhhHhcCCHH-HHHHHHHHHHHHcCCCcEEEEE
Confidence 333433333344568888633 344566555 678997666654
No 14
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=91.40 E-value=1.4 Score=40.93 Aligned_cols=133 Identities=15% Similarity=0.186 Sum_probs=71.5
Q ss_pred HHHHHHHhcCCCccchhhhhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCCh
Q 041748 167 LAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSI 246 (479)
Q Consensus 167 ~A~~~f~e~sP~~kfah~tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~ 246 (479)
.-|..++. ..++.-+....-..|++.+.- .+.-+|+|+|.|.| .+...|+.+- ..++|||+.+.
T Consensus 25 ~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~vLdiG~G~G----~~~~~l~~~~------~~~v~~vD~s~ 88 (266)
T 3ujc_A 25 KVYEFIFG-ENYISSGGLEATKKILSDIEL-----NENSKVLDIGSGLG----GGCMYINEKY------GAHTHGIDICS 88 (266)
T ss_dssp HHHHHHHC-TTCCSTTHHHHHHHHTTTCCC-----CTTCEEEEETCTTS----HHHHHHHHHH------CCEEEEEESCH
T ss_pred HHHHHHhC-CCccccchHHHHHHHHHhcCC-----CCCCEEEEECCCCC----HHHHHHHHHc------CCEEEEEeCCH
Confidence 33444442 334444444444556665532 24568999999988 3455566551 14899999988
Q ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 247 EELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 247 ~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
..++.+.+++... +++.|.- .+ ...+...++..=+|-+...|||+... ....+|+.+ +-|+|.-.+++
T Consensus 89 ~~~~~a~~~~~~~----~~~~~~~----~d--~~~~~~~~~~fD~v~~~~~l~~~~~~-~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 89 NIVNMANERVSGN----NKIIFEA----ND--ILTKEFPENNFDLIYSRDAILALSLE-NKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp HHHHHHHHTCCSC----TTEEEEE----CC--TTTCCCCTTCEEEEEEESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHhhcC----CCeEEEE----Cc--cccCCCCCCcEEEEeHHHHHHhcChH-HHHHHHHHHHHHcCCCCEEEE
Confidence 7776665543322 2243322 11 11122223333333344558888532 344566555 56899755544
Q ss_pred e
Q 041748 326 E 326 (479)
Q Consensus 326 E 326 (479)
.
T Consensus 158 ~ 158 (266)
T 3ujc_A 158 T 158 (266)
T ss_dssp E
T ss_pred E
Confidence 3
No 15
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=91.31 E-value=3.3 Score=40.71 Aligned_cols=115 Identities=12% Similarity=0.089 Sum_probs=64.8
Q ss_pred HHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe--
Q 041748 189 AILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL-- 266 (479)
Q Consensus 189 AILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv-- 266 (479)
.|++.+.-. ....+|+|+|.|.|. +...|+.+. |.+++|+++. ...++.+.+++.+ .+ +
T Consensus 169 ~~l~~~~~~----~~~~~vlDvG~G~G~----~~~~l~~~~-----p~~~~~~~D~-~~~~~~a~~~~~~----~~-~~~ 229 (352)
T 3mcz_A 169 DVVSELGVF----ARARTVIDLAGGHGT----YLAQVLRRH-----PQLTGQIWDL-PTTRDAARKTIHA----HD-LGG 229 (352)
T ss_dssp HHHHTCGGG----TTCCEEEEETCTTCH----HHHHHHHHC-----TTCEEEEEEC-GGGHHHHHHHHHH----TT-CGG
T ss_pred HHHHhCCCc----CCCCEEEEeCCCcCH----HHHHHHHhC-----CCCeEEEEEC-HHHHHHHHHHHHh----cC-CCC
Confidence 556655432 126899999999994 566677661 3489999988 4566666655443 23 3
Q ss_pred eEEEEEeeccceecccc-CCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEE-EEee
Q 041748 267 VFEFQGLIRGSRLVNIR-KKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVT-LVEQ 327 (479)
Q Consensus 267 pFeF~~v~~~~~l~~L~-~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvt-lvE~ 327 (479)
..+|..- +. .... ..++.+=+|-+..-||++.++ ....+|+.+ +.|+|.-.+ ++|.
T Consensus 230 ~v~~~~~--d~--~~~~~~~~~~~D~v~~~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 230 RVEFFEK--NL--LDARNFEGGAADVVMLNDCLHYFDAR-EAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp GEEEEEC--CT--TCGGGGTTCCEEEEEEESCGGGSCHH-HHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceEEEeC--Cc--ccCcccCCCCccEEEEecccccCCHH-HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 2455432 11 1111 012223333344458888764 345666665 578997654 4443
No 16
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=91.06 E-value=2.5 Score=40.80 Aligned_cols=138 Identities=11% Similarity=-0.020 Sum_probs=75.9
Q ss_pred HHHHhcCCCccchhhhhHHHHHHHHHhchhccCceeEEEeccccc---cccchHHHHHhhcccCCCCCceEEEeeecCCh
Q 041748 170 TDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSY---GFQWPSLIQSLSEKATNGNRISFRITGFGRSI 246 (479)
Q Consensus 170 ~~f~e~sP~~kfah~tANqAILEA~~ge~~~~~~~VHIIDf~I~~---G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~ 246 (479)
..+.++.|-+. ....+|+..++.+...-......-+|+|+|.|. |. + .+.+..+. |..+||+|+.+.
T Consensus 45 ~~~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~---~~~~~~~~-----p~~~v~~vD~sp 114 (274)
T 2qe6_A 45 DYACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN-T---HEVAQSVN-----PDARVVYVDIDP 114 (274)
T ss_dssp HHHHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC-H---HHHHHHHC-----TTCEEEEEESSH
T ss_pred HHHHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCCh-H---HHHHHHhC-----CCCEEEEEECCh
Confidence 44555566543 234556666554321100001235899999998 72 2 33344431 246999999988
Q ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eec----cc----cCCCCcEEEEeeccccccccchhhhHHHHHHhHc-
Q 041748 247 EELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLV----NI----RKKKHETVAANLVFHLNTLKIYLKISDTLNLVRS- 316 (479)
Q Consensus 247 ~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~----~L----~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~- 316 (479)
..++...+++. ..+++ +|.. .+. +.. .. .+..+...+|-+..-|||+.++ ....+|+.+++
T Consensus 115 ~~l~~Ar~~~~----~~~~v--~~~~--~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~ 185 (274)
T 2qe6_A 115 MVLTHGRALLA----KDPNT--AVFT--ADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDA 185 (274)
T ss_dssp HHHHHHHHHHT----TCTTE--EEEE--CCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT-THHHHHHHHHHH
T ss_pred HHHHHHHHhcC----CCCCe--EEEE--eeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcH-HHHHHHHHHHHh
Confidence 88887777662 12323 3432 222 110 00 1222345556666779999876 56678877765
Q ss_pred cCCcEEEEEe
Q 041748 317 IKPTIVTLVE 326 (479)
Q Consensus 317 L~P~VvtlvE 326 (479)
|+|.-.++..
T Consensus 186 L~pGG~l~i~ 195 (274)
T 2qe6_A 186 LAPGSYLFMT 195 (274)
T ss_dssp SCTTCEEEEE
T ss_pred CCCCcEEEEE
Confidence 9996544433
No 17
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=90.87 E-value=2 Score=43.26 Aligned_cols=108 Identities=12% Similarity=0.033 Sum_probs=63.8
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhc-C---CeeEEEEEeeccc-e
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSF-R---NLVFEFQGLIRGS-R 278 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~l-g---nvpFeF~~v~~~~-~ 278 (479)
.-+|+|+|.|.|. +...|+.+- .|..++|||+.+...++.+.+++...+..+ | .-..+|. ..+. +
T Consensus 84 ~~~VLDlGcG~G~----~~~~la~~~----~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~--~~d~~~ 153 (383)
T 4fsd_A 84 GATVLDLGCGTGR----DVYLASKLV----GEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFL--KGFIEN 153 (383)
T ss_dssp TCEEEEESCTTSH----HHHHHHHHH----TTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEE--ESCTTC
T ss_pred CCEEEEecCccCH----HHHHHHHHh----CCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEE--EccHHH
Confidence 4689999999993 333445441 123599999999998998888888776543 1 0123333 2222 2
Q ss_pred eccc---cCCCC--cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 279 LVNI---RKKKH--ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 279 l~~L---~~~~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
+..+ .+.++ +.|+.|. .|||+.+ ...+|+.+ +-|+|.-.++..
T Consensus 154 l~~~~~~~~~~~~fD~V~~~~--~l~~~~d---~~~~l~~~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 154 LATAEPEGVPDSSVDIVISNC--VCNLSTN---KLALFKEIHRVLRDGGELYFS 202 (383)
T ss_dssp GGGCBSCCCCTTCEEEEEEES--CGGGCSC---HHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcccCCCCCCCEEEEEEcc--chhcCCC---HHHHHHHHHHHcCCCCEEEEE
Confidence 2111 33333 4455554 4778765 34566555 678998665553
No 18
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=90.84 E-value=1.5 Score=44.05 Aligned_cols=108 Identities=13% Similarity=0.139 Sum_probs=60.6
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV 267 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp 267 (479)
..|++.+.+- ...-+|+|+|-|.|. +...|+.+. |.+++|+++. ...+ +.|+..++|
T Consensus 190 ~~~~~~~~~~----~~~~~vlDvG~G~G~----~~~~l~~~~-----p~~~~~~~D~-~~~~--------~~a~~~~~v- 246 (364)
T 3p9c_A 190 KKLLELYHGF----EGLGTLVDVGGGVGA----TVAAIAAHY-----PTIKGVNFDL-PHVI--------SEAPQFPGV- 246 (364)
T ss_dssp HHHHHHCCTT----TTCSEEEEETCTTSH----HHHHHHHHC-----TTCEEEEEEC-HHHH--------TTCCCCTTE-
T ss_pred HHHHHhcccc----cCCCEEEEeCCCCCH----HHHHHHHHC-----CCCeEEEecC-HHHH--------HhhhhcCCe-
Confidence 4466665422 246799999999993 456666651 3578899987 3322 223333334
Q ss_pred EEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcE-EEEEee
Q 041748 268 FEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTI-VTLVEQ 327 (479)
Q Consensus 268 FeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~V-vtlvE~ 327 (479)
+|.. .+. .. ...++++++... -||+..++ ....+|+.+ +.|+|.- ++++|.
T Consensus 247 -~~~~--~D~--~~-~~p~~D~v~~~~--vlh~~~d~-~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 247 -THVG--GDM--FK-EVPSGDTILMKW--ILHDWSDQ-HCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp -EEEE--CCT--TT-CCCCCSEEEEES--CGGGSCHH-HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred -EEEe--CCc--CC-CCCCCCEEEehH--HhccCCHH-HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 3332 111 11 111345655444 47888765 345667766 5689965 445554
No 19
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=90.81 E-value=1.4 Score=42.52 Aligned_cols=106 Identities=8% Similarity=0.005 Sum_probs=64.1
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccceec
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGSRLV 280 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~~l~ 280 (479)
+.-+|+|+|.|.|. +...|+.+ ..|..++|||+.+...++.+.+++. ..| ++ .+|.. .+. .
T Consensus 118 ~~~~vLDiGcG~G~----~~~~la~~----~~~~~~v~gvD~s~~~~~~a~~~~~----~~~-~~~~v~~~~--~d~--~ 180 (305)
T 3ocj_A 118 PGCVVASVPCGWMS----ELLALDYS----ACPGVQLVGIDYDPEALDGATRLAA----GHA-LAGQITLHR--QDA--W 180 (305)
T ss_dssp TTCEEEETTCTTCH----HHHTSCCT----TCTTCEEEEEESCHHHHHHHHHHHT----TST-TGGGEEEEE--CCG--G
T ss_pred CCCEEEEecCCCCH----HHHHHHHh----cCCCCeEEEEECCHHHHHHHHHHHH----hcC-CCCceEEEE--Cch--h
Confidence 35689999999883 34455433 1235799999998887777766553 333 33 45532 222 1
Q ss_pred cccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 281 NIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 281 ~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.+... +..=+|-|..-+||+.+......+|+.+ +.|+|.-.+++.
T Consensus 181 ~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 226 (305)
T 3ocj_A 181 KLDTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTS 226 (305)
T ss_dssp GCCCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCcc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 12222 3332333444578887765555677666 569998877774
No 20
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=90.63 E-value=1.9 Score=43.28 Aligned_cols=107 Identities=15% Similarity=0.061 Sum_probs=61.7
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+..+|+|+|.|.|. +...|+.+. |.+++|+++. ...++.+.+++.+.. +. =..+|.... .. ..+
T Consensus 202 ~~~~vlDvG~G~G~----~~~~l~~~~-----p~~~~~~~D~-~~~~~~a~~~~~~~~--l~-~~v~~~~~d--~~-~~~ 265 (369)
T 3gwz_A 202 GAATAVDIGGGRGS----LMAAVLDAF-----PGLRGTLLER-PPVAEEARELLTGRG--LA-DRCEILPGD--FF-ETI 265 (369)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC-----TTCEEEEEEC-HHHHHHHHHHHHHTT--CT-TTEEEEECC--TT-TCC
T ss_pred cCcEEEEeCCCccH----HHHHHHHHC-----CCCeEEEEcC-HHHHHHHHHhhhhcC--cC-CceEEeccC--CC-CCC
Confidence 46899999999994 556677661 3579999998 777777776665421 11 124444321 11 111
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEE-EEEeecC
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIV-TLVEQEG 329 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vv-tlvE~ea 329 (479)
.. .-++++.+.+ ||+..++ ....+|+.+ +.|+|.-. +++|.-.
T Consensus 266 p~-~~D~v~~~~v--lh~~~d~-~~~~~L~~~~~~L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 266 PD-GADVYLIKHV--LHDWDDD-DVVRILRRIATAMKPDSRLLVIDNLI 310 (369)
T ss_dssp CS-SCSEEEEESC--GGGSCHH-HHHHHHHHHHTTCCTTCEEEEEEEBC
T ss_pred CC-CceEEEhhhh--hccCCHH-HHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 11 2345544444 6887664 334566666 56888644 4555433
No 21
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=90.28 E-value=3.2 Score=41.05 Aligned_cols=113 Identities=14% Similarity=0.102 Sum_probs=65.0
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe-
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL- 266 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv- 266 (479)
..|++.+.- .+..+|+|+|.|.| .+...|+.+ . |.+++|+++. ...++.+.+++.+. + +
T Consensus 172 ~~~~~~~~~-----~~~~~vlDvG~G~G----~~~~~l~~~--~---~~~~~~~~D~-~~~~~~a~~~~~~~----~-~~ 231 (374)
T 1qzz_A 172 EAPADAYDW-----SAVRHVLDVGGGNG----GMLAAIALR--A---PHLRGTLVEL-AGPAERARRRFADA----G-LA 231 (374)
T ss_dssp HHHHHTSCC-----TTCCEEEEETCTTS----HHHHHHHHH--C---TTCEEEEEEC-HHHHHHHHHHHHHT----T-CT
T ss_pred HHHHHhCCC-----CCCCEEEEECCCcC----HHHHHHHHH--C---CCCEEEEEeC-HHHHHHHHHHHHhc----C-CC
Confidence 445555432 24579999999999 456667766 1 3579999998 77777777665432 3 3
Q ss_pred -eEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcE-EEEEee
Q 041748 267 -VFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTI-VTLVEQ 327 (479)
Q Consensus 267 -pFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~V-vtlvE~ 327 (479)
..+|..- +.. ..+ +...=+|-+...||++.+.. ...+|+.+ +.|+|.- ++++|.
T Consensus 232 ~~v~~~~~--d~~-~~~---~~~~D~v~~~~vl~~~~~~~-~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 232 DRVTVAEG--DFF-KPL---PVTADVVLLSFVLLNWSDED-ALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp TTEEEEEC--CTT-SCC---SCCEEEEEEESCGGGSCHHH-HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CceEEEeC--CCC-CcC---CCCCCEEEEeccccCCCHHH-HHHHHHHHHHhcCCCcEEEEEec
Confidence 2444322 210 011 11122333444578886643 23556555 5689986 445564
No 22
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=90.07 E-value=2 Score=38.26 Aligned_cols=114 Identities=13% Similarity=0.061 Sum_probs=66.4
Q ss_pred HHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe
Q 041748 187 NQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL 266 (479)
Q Consensus 187 NqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv 266 (479)
.+.|++.+... .. +|+|+|.|.|. +...|+.+ |..++|||+.+...++.+.+++...--.-
T Consensus 33 ~~~~~~~~~~~-----~~-~vLdiG~G~G~----~~~~l~~~------~~~~v~~~D~s~~~~~~a~~~~~~~~~~~--- 93 (219)
T 3dlc_A 33 AENIINRFGIT-----AG-TCIDIGSGPGA----LSIALAKQ------SDFSIRALDFSKHMNEIALKNIADANLND--- 93 (219)
T ss_dssp HHHHHHHHCCC-----EE-EEEEETCTTSH----HHHHHHHH------SEEEEEEEESCHHHHHHHHHHHHHTTCTT---
T ss_pred HHHHHHhcCCC-----CC-EEEEECCCCCH----HHHHHHHc------CCCeEEEEECCHHHHHHHHHHHHhccccC---
Confidence 35555555432 34 99999999994 45556655 24799999999888887777665432111
Q ss_pred eEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 267 VFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 267 pFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
..+|. ..+. ..+...++..=+|-|...|||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 94 ~~~~~--~~d~--~~~~~~~~~~D~v~~~~~l~~~~~---~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 94 RIQIV--QGDV--HNIPIEDNYADLIVSRGSVFFWED---VATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp TEEEE--ECBT--TBCSSCTTCEEEEEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEE--EcCH--HHCCCCcccccEEEECchHhhccC---HHHHHHHHHHhCCCCCEEEEE
Confidence 23443 2222 122233343333334445788843 34555554 568998776664
No 23
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=89.69 E-value=2.6 Score=41.07 Aligned_cols=103 Identities=13% Similarity=0.067 Sum_probs=58.6
Q ss_pred eEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccccC
Q 041748 205 LHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIRK 284 (479)
Q Consensus 205 VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~~ 284 (479)
.+|+|+|.|.|. +...|+.+. |.+++|+++. ...++.+.+++.+.--. + ..+|.. .+..- .+.
T Consensus 169 ~~vlDvG~G~G~----~~~~l~~~~-----p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~--~v~~~~--~d~~~-~~~- 231 (334)
T 2ip2_A 169 RSFVDVGGGSGE----LTKAILQAE-----PSARGVMLDR-EGSLGVARDNLSSLLAG-E--RVSLVG--GDMLQ-EVP- 231 (334)
T ss_dssp CEEEEETCTTCH----HHHHHHHHC-----TTCEEEEEEC-TTCTHHHHHHTHHHHHT-T--SEEEEE--SCTTT-CCC-
T ss_pred CEEEEeCCCchH----HHHHHHHHC-----CCCEEEEeCc-HHHHHHHHHHHhhcCCC-C--cEEEec--CCCCC-CCC-
Confidence 799999999993 555666651 3469999998 66666666665543211 1 244432 21100 111
Q ss_pred CCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEE-EEEee
Q 041748 285 KKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIV-TLVEQ 327 (479)
Q Consensus 285 ~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vv-tlvE~ 327 (479)
..-++++.+. -||+..++ ....+|+.+ +.|+|.-. +++|.
T Consensus 232 ~~~D~v~~~~--vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 232 SNGDIYLLSR--IIGDLDEA-ASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp SSCSEEEEES--CGGGCCHH-HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCCEEEEch--hccCCCHH-HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 2224555444 47887654 334566655 56899754 44553
No 24
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=89.67 E-value=1.2 Score=42.86 Aligned_cols=115 Identities=10% Similarity=0.105 Sum_probs=69.1
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecc-
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVN- 281 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~- 281 (479)
+..+|+|+|.|.|.--..+++.|+.+ .+...+.+|||+.+.+.++...+++.+. ..+.|+.|+|...... ++..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~---~~~~~v~~~~vD~S~~ml~~a~~~~~~~-~~~~~v~~~~~~~~~~-~~~~~ 126 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQ---YPGVCINNEVVEPSAEQIAKYKELVAKT-SNLENVKFAWHKETSS-EYQSR 126 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHH---STTCEEEEEEECSCHHHHHHHHHHHHTC-SSCTTEEEEEECSCHH-HHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhh---CCCceeeEEEEeCCHHHHHHHHHHHHhc-cCCCcceEEEEecchh-hhhhh
Confidence 46799999999995444577777766 1111334599999998888877765422 1234577776543211 1110
Q ss_pred --ccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 282 --IRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 282 --L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
....++..=+|-|.+.|||+.|. ..+|+.+ +-|+|.-.+++
T Consensus 127 ~~~~~~~~~fD~V~~~~~l~~~~d~---~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 127 MLEKKELQKWDFIHMIQMLYYVKDI---PATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp HHTTTCCCCEEEEEEESCGGGCSCH---HHHHHHHHHTEEEEEEEEE
T ss_pred hccccCCCceeEEEEeeeeeecCCH---HHHHHHHHHHcCCCcEEEE
Confidence 01223434455566678999763 4566666 45799865544
No 25
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=89.35 E-value=2.7 Score=37.82 Aligned_cols=96 Identities=17% Similarity=0.196 Sum_probs=58.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++ + +.|.-. + ...+.
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~---~----~~v~~vD~s~~~~~~a~~~~-------~-~~~~~~----d--~~~~~ 98 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA---G----FDVDATDGSPELAAEASRRL-------G-RPVRTM----L--FHQLD 98 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT---T----CEEEEEESCHHHHHHHHHHH-------T-SCCEEC----C--GGGCC
T ss_pred CCcEEEECCCCCH----HHHHHHHc---C----CeEEEECCCHHHHHHHHHhc-------C-CceEEe----e--eccCC
Confidence 4689999999984 45566655 2 38999999888777776655 3 444321 1 11122
Q ss_pred CCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 284 KKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 284 ~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.++..=+|-|...|||+..+ ....+|+.+ +.|+|.-++++.
T Consensus 99 -~~~~fD~v~~~~~l~~~~~~-~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 99 -AIDAYDAVWAHACLLHVPRD-ELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp -CCSCEEEEEECSCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCcEEEEEecCchhhcCHH-HHHHHHHHHHHhcCCCcEEEEE
Confidence 22323233345567888743 344566555 578998777664
No 26
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=89.19 E-value=7.5 Score=36.11 Aligned_cols=100 Identities=9% Similarity=0.041 Sum_probs=60.6
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee-EEEEEeeccceecc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV-FEFQGLIRGSRLVN 281 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp-FeF~~v~~~~~l~~ 281 (479)
+.-+|+|+|.|.|. +...|+.+ + + ++|||+.+.+.++.+.+++.+ .| ++ .+|. ..+ ...
T Consensus 37 ~~~~vLDiGcG~G~----~~~~l~~~---~-~---~v~gvD~s~~~l~~a~~~~~~----~~-~~~v~~~--~~d--~~~ 96 (260)
T 1vl5_A 37 GNEEVLDVATGGGH----VANAFAPF---V-K---KVVAFDLTEDILKVARAFIEG----NG-HQQVEYV--QGD--AEQ 96 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHGGG---S-S---EEEEEESCHHHHHHHHHHHHH----TT-CCSEEEE--ECC--C-C
T ss_pred CCCEEEEEeCCCCH----HHHHHHHh---C-C---EEEEEeCCHHHHHHHHHHHHh----cC-CCceEEE--Eec--HHh
Confidence 35689999999884 55667776 2 2 899999998888777766543 23 32 3443 222 222
Q ss_pred ccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 282 IRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 282 L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
+...++..=+|-|.+.|||+.+. ..+|+.+ +-|+|.-.+++
T Consensus 97 l~~~~~~fD~V~~~~~l~~~~d~---~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 97 MPFTDERFHIVTCRIAAHHFPNP---ASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp CCSCTTCEEEEEEESCGGGCSCH---HHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCCEEEEEEhhhhHhcCCH---HHHHHHHHHHcCCCCEEEE
Confidence 33333433333444568898753 3555544 67899866554
No 27
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=89.14 E-value=3.9 Score=36.75 Aligned_cols=102 Identities=8% Similarity=0.079 Sum_probs=62.6
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+.-+|+|+|.|.| .+...|+.+ + -++|||+.+...++.+.+++.. .+++ +|. ..+. ..+
T Consensus 51 ~~~~vLDiGcG~G----~~~~~l~~~---~----~~v~~vD~s~~~~~~a~~~~~~----~~~~--~~~--~~d~--~~~ 109 (216)
T 3ofk_A 51 AVSNGLEIGCAAG----AFTEKLAPH---C----KRLTVIDVMPRAIGRACQRTKR----WSHI--SWA--ATDI--LQF 109 (216)
T ss_dssp SEEEEEEECCTTS----HHHHHHGGG---E----EEEEEEESCHHHHHHHHHHTTT----CSSE--EEE--ECCT--TTC
T ss_pred CCCcEEEEcCCCC----HHHHHHHHc---C----CEEEEEECCHHHHHHHHHhccc----CCCe--EEE--Ecch--hhC
Confidence 5689999999999 355566765 2 4899999988877777665432 3323 332 2221 112
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
. .++..=+|-|...|||+.+......+|+.+ +.|+|.-++++.
T Consensus 110 ~-~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 110 S-TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp C-CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred C-CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 1 123232333445688998755555666655 679998776664
No 28
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=88.94 E-value=0.96 Score=44.75 Aligned_cols=126 Identities=8% Similarity=-0.024 Sum_probs=75.6
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
--.|+|+|.|.|. | +++-. ..+|..++++++-+...++-+.++| ..+| +++.|...-.. ...-
T Consensus 133 p~~VLDLGCG~Gp----L--Al~~~---~~~p~a~y~a~DId~~~le~a~~~l----~~~g-~~~~~~v~D~~---~~~p 195 (281)
T 3lcv_B 133 PNTLRDLACGLNP----L--AAPWM---GLPAETVYIASDIDARLVGFVDEAL----TRLN-VPHRTNVADLL---EDRL 195 (281)
T ss_dssp CSEEEETTCTTGG----G--CCTTT---TCCTTCEEEEEESBHHHHHHHHHHH----HHTT-CCEEEEECCTT---TSCC
T ss_pred CceeeeeccCccH----H--HHHHH---hhCCCCEEEEEeCCHHHHHHHHHHH----HhcC-CCceEEEeeec---ccCC
Confidence 3488999998882 2 22222 2346799999999888777776655 4566 88877532211 1122
Q ss_pred CCCCcEEEEeeccccccccchhhhHHHHHHhHccCCcEEEEEeecCCCCCCchhHHHHHHHHHHHHHhhhh
Q 041748 284 KKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSL 354 (479)
Q Consensus 284 ~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P~VvtlvE~ea~~ns~~F~~RF~eaL~yYsalFDSL 354 (479)
..+.+++.+|-. +|+|.++... ..++.+..|+|..|+|.=+--+.++ |=..--..|+..|+..
T Consensus 196 ~~~~DvaL~lkt--i~~Le~q~kg-~g~~ll~aL~~~~vvVSfp~ksl~G-----rs~gm~~~Y~~~~e~~ 258 (281)
T 3lcv_B 196 DEPADVTLLLKT--LPCLETQQRG-SGWEVIDIVNSPNIVVTFPTKSLGQ-----RSKGMFQNYSQSFESQ 258 (281)
T ss_dssp CSCCSEEEETTC--HHHHHHHSTT-HHHHHHHHSSCSEEEEEEECC------------CHHHHHHHHHHHH
T ss_pred CCCcchHHHHHH--HHHhhhhhhH-HHHHHHHHhCCCCEEEeccchhhcC-----CCcchhhHHHHHHHHH
Confidence 334566666665 7888766443 3448999999999877654322221 1112234677777764
No 29
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=88.58 E-value=1.5 Score=44.10 Aligned_cols=98 Identities=11% Similarity=0.061 Sum_probs=56.5
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
..-+|+|+|.|.|. +...|+.+. |.+++|+++. ...+ +.|+..++|. |.. .+.. ..+
T Consensus 203 ~~~~vlDvG~G~G~----~~~~l~~~~-----p~~~~~~~D~-~~~~--------~~a~~~~~v~--~~~--~d~~-~~~ 259 (368)
T 3reo_A 203 GLTTIVDVGGGTGA----VASMIVAKY-----PSINAINFDL-PHVI--------QDAPAFSGVE--HLG--GDMF-DGV 259 (368)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC-----TTCEEEEEEC-HHHH--------TTCCCCTTEE--EEE--CCTT-TCC
T ss_pred CCCEEEEeCCCcCH----HHHHHHHhC-----CCCEEEEEeh-HHHH--------HhhhhcCCCE--EEe--cCCC-CCC
Confidence 35799999999993 556677661 4578999987 3322 2233334343 332 1110 011
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcE-EEEEeec
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTI-VTLVEQE 328 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~V-vtlvE~e 328 (479)
.++++++.+.+ ||++.++ ....+|+.+ +.|+|.- ++++|.-
T Consensus 260 --p~~D~v~~~~v--lh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 260 --PKGDAIFIKWI--CHDWSDE-HCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp --CCCSEEEEESC--GGGBCHH-HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred --CCCCEEEEech--hhcCCHH-HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 13466655554 7888765 344667666 5789975 4455543
No 30
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=88.40 E-value=13 Score=35.15 Aligned_cols=103 Identities=17% Similarity=0.141 Sum_probs=60.1
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+...|+|+|.|.| .+...|+.+ -|+..++|||+.+...++.+.+++ ...+ ...+|. ..+.. .+
T Consensus 22 ~~~~vLDiGcG~G----~~~~~l~~~----~~~~~~v~gvD~s~~~~~~a~~~~----~~~~-~~v~~~--~~d~~--~~ 84 (284)
T 3gu3_A 22 KPVHIVDYGCGYG----YLGLVLMPL----LPEGSKYTGIDSGETLLAEARELF----RLLP-YDSEFL--EGDAT--EI 84 (284)
T ss_dssp SCCEEEEETCTTT----HHHHHHTTT----SCTTCEEEEEESCHHHHHHHHHHH----HSSS-SEEEEE--ESCTT--TC
T ss_pred CCCeEEEecCCCC----HHHHHHHHh----CCCCCEEEEEECCHHHHHHHHHHH----HhcC-CceEEE--Ecchh--hc
Confidence 4678999999999 344556665 133478999999887777666554 3344 444443 22221 12
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.. ++..=+|-+...|||+.+. ..+|+.+ +.|+|.-.+++.
T Consensus 85 ~~-~~~fD~v~~~~~l~~~~~~---~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 85 EL-NDKYDIAICHAFLLHMTTP---ETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp CC-SSCEEEEEEESCGGGCSSH---HHHHHHHHHTEEEEEEEEEE
T ss_pred Cc-CCCeeEEEECChhhcCCCH---HHHHHHHHHHcCCCCEEEEE
Confidence 12 2323233333457888653 3555544 678998766543
No 31
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=87.57 E-value=1.3 Score=41.79 Aligned_cols=101 Identities=9% Similarity=0.074 Sum_probs=61.2
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.=+|+|+|.|.| +|--.++.. +|..++++++-+...++-+.+++ +..| +...+.. . +....
T Consensus 50 ~~~VLDlGCG~G----plAl~l~~~-----~p~a~~~A~Di~~~~leiar~~~----~~~g-~~~~v~~-~---d~~~~- 110 (200)
T 3fzg_A 50 VSSILDFGCGFN----PLALYQWNE-----NEKIIYHAYDIDRAEIAFLSSII----GKLK-TTIKYRF-L---NKESD- 110 (200)
T ss_dssp CSEEEEETCTTH----HHHHHHHCS-----SCCCEEEEECSCHHHHHHHHHHH----HHSC-CSSEEEE-E---CCHHH-
T ss_pred CCeEEEecCCCC----HHHHHHHhc-----CCCCEEEEEeCCHHHHHHHHHHH----HhcC-CCccEEE-e---ccccc-
Confidence 358999999888 333333333 34569999999988888777664 4555 6543332 1 11111
Q ss_pred CCCC--cEEEEeeccccccccchhhhHHHHHHhHccCCcEEEEEee
Q 041748 284 KKKH--ETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVEQ 327 (479)
Q Consensus 284 ~~~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P~VvtlvE~ 327 (479)
.-++ +++..+-+ ||+| ++. .....+.+..|+|..++|.=+
T Consensus 111 ~~~~~~DvVLa~k~--LHlL-~~~-~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 111 VYKGTYDVVFLLKM--LPVL-KQQ-DVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HTTSEEEEEEEETC--HHHH-HHT-TCCHHHHHHTCEEEEEEEEEE
T ss_pred CCCCCcChhhHhhH--HHhh-hhh-HHHHHHHHHHhCCCCEEEEeC
Confidence 1222 34444433 7888 432 234557889999998877755
No 32
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=87.40 E-value=3.5 Score=37.18 Aligned_cols=103 Identities=19% Similarity=0.234 Sum_probs=60.2
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe------eEEEEEeeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL------VFEFQGLIRGS 277 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv------pFeF~~v~~~~ 277 (479)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++ +..+ + ..+|. ..+.
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~---~----~~v~~vD~s~~~~~~a~~~~----~~~~-~~~~~~~~~~~~--~~d~ 92 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK---G----YSVTGIDINSEAIRLAETAA----RSPG-LNQKTGGKAEFK--VENA 92 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT---T----CEEEEEESCHHHHHHHHHHT----TCCS-CCSSSSCEEEEE--ECCT
T ss_pred CCeEEEECCCCCH----HHHHHHhC---C----CeEEEEECCHHHHHHHHHHH----HhcC-CccccCcceEEE--Eecc
Confidence 4689999999984 44455654 1 38999998887666655443 3333 3 23443 2222
Q ss_pred eeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 278 RLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 278 ~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
..+...++..=+|-+...|||+.+......+|+.+ +.|+|.-.+++.
T Consensus 93 --~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 93 --SSLSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp --TSCCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --cccCCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 12223333333333445688987765555677666 568997665443
No 33
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=87.34 E-value=6.3 Score=38.77 Aligned_cols=114 Identities=14% Similarity=0.101 Sum_probs=63.2
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe-
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL- 266 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv- 266 (479)
+.|++.+.- .+.-+|+|+|.|.|. +...|+.+ . |.+++|+++. ...++.+.+++.+ .+ +
T Consensus 173 ~~l~~~~~~-----~~~~~vLDvG~G~G~----~~~~l~~~----~-~~~~~~~~D~-~~~~~~a~~~~~~----~~-~~ 232 (360)
T 1tw3_A 173 DAPAAAYDW-----TNVRHVLDVGGGKGG----FAAAIARR----A-PHVSATVLEM-AGTVDTARSYLKD----EG-LS 232 (360)
T ss_dssp HHHHHHSCC-----TTCSEEEEETCTTSH----HHHHHHHH----C-TTCEEEEEEC-TTHHHHHHHHHHH----TT-CT
T ss_pred HHHHHhCCC-----ccCcEEEEeCCcCcH----HHHHHHHh----C-CCCEEEEecC-HHHHHHHHHHHHh----cC-CC
Confidence 455665532 235799999999993 45566665 1 3579999997 5566666655543 23 3
Q ss_pred -eEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcE-EEEEeec
Q 041748 267 -VFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTI-VTLVEQE 328 (479)
Q Consensus 267 -pFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~V-vtlvE~e 328 (479)
..+|.. .+.. ..+ +..+=+|-+..-||++.+. ....+|+.+ +.|+|.- ++++|..
T Consensus 233 ~~v~~~~--~d~~-~~~---~~~~D~v~~~~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 233 DRVDVVE--GDFF-EPL---PRKADAIILSFVLLNWPDH-DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp TTEEEEE--CCTT-SCC---SSCEEEEEEESCGGGSCHH-HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CceEEEe--CCCC-CCC---CCCccEEEEcccccCCCHH-HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 245542 2210 011 1113233334457887654 234566655 5689976 4455543
No 34
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=87.30 E-value=2.7 Score=39.86 Aligned_cols=119 Identities=12% Similarity=0.030 Sum_probs=68.6
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV 267 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp 267 (479)
+.|++.+... ..-+|+|+|.|.|. +...|+.+ ++ ++|||+.+...++.+.+++.+.....+...
T Consensus 47 ~~l~~~l~~~-----~~~~vLDiGcG~G~----~~~~l~~~----~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~ 110 (293)
T 3thr_A 47 AWLLGLLRQH-----GCHRVLDVACGTGV----DSIMLVEE----GF---SVTSVDASDKMLKYALKERWNRRKEPAFDK 110 (293)
T ss_dssp HHHHHHHHHT-----TCCEEEETTCTTSH----HHHHHHHT----TC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHT
T ss_pred HHHHHHhccc-----CCCEEEEecCCCCH----HHHHHHHC----CC---eEEEEECCHHHHHHHHHhhhhcccccccce
Confidence 4455555432 45789999999994 34455655 22 899999998888888776644332211112
Q ss_pred EEEEEeeccceecccc---CCCCcEEEEeec-cccccccc----hhhhHHHHHHh-HccCCcEEEEEe
Q 041748 268 FEFQGLIRGSRLVNIR---KKKHETVAANLV-FHLNTLKI----YLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 268 FeF~~v~~~~~l~~L~---~~~~EaLaVN~~-~~Lh~L~~----~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
+.|.. .+. ..+. ..++..=+|-|. ..|||+.+ ......+|+.+ +.|+|.-.+++.
T Consensus 111 ~~~~~--~d~--~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 111 WVIEE--ANW--LTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp CEEEE--CCG--GGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eeEee--cCh--hhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 33322 221 1111 233333333343 56889876 33455667665 569998766655
No 35
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=86.92 E-value=1.2 Score=43.93 Aligned_cols=147 Identities=9% Similarity=0.007 Sum_probs=82.1
Q ss_pred HHHHHHHhcCCCccchhhhhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCCh
Q 041748 167 LAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSI 246 (479)
Q Consensus 167 ~A~~~f~e~sP~~kfah~tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~ 246 (479)
.+-..+.+..|.+. ...-+|.+.|.-+...-.....-=+|+|+|.|.|. +..+..++.+. -|..|||+|+.+.
T Consensus 43 ~~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT--~~~~~~la~~~----~P~arVv~VD~sp 115 (277)
T 3giw_A 43 EAGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPT--SPNLHEIAQSV----APESRVVYVDNDP 115 (277)
T ss_dssp HHHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCC--SSCHHHHHHHH----CTTCEEEEEECCH
T ss_pred HHHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCc--ccHHHHHHHHH----CCCCEEEEEeCCh
Confidence 34455667888874 34458888777543210000112379999998754 22344555542 1246999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eec--------cccCCCCcEEEEeeccccccccchhhhHHHHHHh-Hc
Q 041748 247 EELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLV--------NIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RS 316 (479)
Q Consensus 247 ~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~--------~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~ 316 (479)
..|+....+|... +.-..+|. ..+. ++. .-.+..++.++|-+..-|||+.+......+|+.+ +.
T Consensus 116 ~mLa~Ar~~l~~~----~~~~~~~v--~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~ 189 (277)
T 3giw_A 116 IVLTLSQGLLAST----PEGRTAYV--EADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEP 189 (277)
T ss_dssp HHHHTTHHHHCCC----SSSEEEEE--ECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTT
T ss_pred HHHHHHHHHhccC----CCCcEEEE--EecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHh
Confidence 8888777776432 11134443 2222 110 0012334444444555689998865445667554 67
Q ss_pred cCCcEEEEEe
Q 041748 317 IKPTIVTLVE 326 (479)
Q Consensus 317 L~P~VvtlvE 326 (479)
|+|--++++.
T Consensus 190 L~PGG~Lvls 199 (277)
T 3giw_A 190 LPSGSYLAMS 199 (277)
T ss_dssp SCTTCEEEEE
T ss_pred CCCCcEEEEE
Confidence 8887544443
No 36
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=86.76 E-value=8 Score=34.71 Aligned_cols=100 Identities=14% Similarity=0.101 Sum_probs=59.1
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-+|+|+|.|.| .+...|+.+ +| ++|||+.+...++.+.+++... + ...+|. ..+. ..+.
T Consensus 39 ~~~vLDlG~G~G----~~~~~l~~~----~~---~v~~vD~s~~~~~~a~~~~~~~----~-~~~~~~--~~d~--~~~~ 98 (227)
T 1ve3_A 39 RGKVLDLACGVG----GFSFLLEDY----GF---EVVGVDISEDMIRKAREYAKSR----E-SNVEFI--VGDA--RKLS 98 (227)
T ss_dssp CCEEEEETCTTS----HHHHHHHHT----TC---EEEEEESCHHHHHHHHHHHHHT----T-CCCEEE--ECCT--TSCC
T ss_pred CCeEEEEeccCC----HHHHHHHHc----CC---EEEEEECCHHHHHHHHHHHHhc----C-CCceEE--ECch--hcCC
Confidence 468999999999 344556665 23 8999999888777777665432 2 233443 2222 1122
Q ss_pred CC--CCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 284 KK--KHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 284 ~~--~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.. .=+.|+.|..+.+++..+ ...+|+.+ +.|+|.-.+++.
T Consensus 99 ~~~~~~D~v~~~~~~~~~~~~~---~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 99 FEDKTFDYVIFIDSIVHFEPLE---LNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp SCTTCEEEEEEESCGGGCCHHH---HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCcEEEEEEcCchHhCCHHH---HHHHHHHHHHHcCCCcEEEEE
Confidence 22 225666666655555432 34555554 568998665554
No 37
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=86.28 E-value=2.2 Score=41.88 Aligned_cols=113 Identities=9% Similarity=0.031 Sum_probs=65.9
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhc--CCeeEEEEEeecccee--
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSF--RNLVFEFQGLIRGSRL-- 279 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~l--gnvpFeF~~v~~~~~l-- 279 (479)
.-+|+|+|.|.|. .+..++.+ ++ -++|||+.+...++.+.++..+..... ....++|.......+.
T Consensus 49 ~~~VLDlGCG~G~----~l~~~~~~---~~---~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~ 118 (302)
T 2vdw_A 49 KRKVLAIDFGNGA----DLEKYFYG---EI---ALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFV 118 (302)
T ss_dssp CCEEEETTCTTTT----THHHHHHT---TC---SEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHH
T ss_pred CCeEEEEecCCcH----hHHHHHhc---CC---CeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhh
Confidence 4689999999984 22233433 22 379999999999998887765431110 0012455432221111
Q ss_pred cccc--CCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 280 VNIR--KKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 280 ~~L~--~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
..|. ..++..=+|.|.+.||++.+......+|+.+ +.|+|.-+++..
T Consensus 119 ~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~ 168 (302)
T 2vdw_A 119 SSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLIT 168 (302)
T ss_dssp HHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 1121 2234455667888899875433446777766 679998776664
No 38
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=86.14 E-value=6.2 Score=35.42 Aligned_cols=111 Identities=15% Similarity=0.148 Sum_probs=64.5
Q ss_pred hHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCC
Q 041748 186 ANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRN 265 (479)
Q Consensus 186 ANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgn 265 (479)
.-..+++.+... +.-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++. .+
T Consensus 33 ~~~~~l~~~~~~-----~~~~vLDiGcG~G~----~~~~l~~~---~----~~v~~vD~s~~~~~~a~~~~~------~~ 90 (220)
T 3hnr_A 33 HYEDILEDVVNK-----SFGNVLEFGVGTGN----LTNKLLLA---G----RTVYGIEPSREMRMIAKEKLP------KE 90 (220)
T ss_dssp THHHHHHHHHHT-----CCSEEEEECCTTSH----HHHHHHHT---T----CEEEEECSCHHHHHHHHHHSC------TT
T ss_pred HHHHHHHHhhcc-----CCCeEEEeCCCCCH----HHHHHHhC---C----CeEEEEeCCHHHHHHHHHhCC------Cc
Confidence 345677777653 46799999999993 45556665 1 489999998877766655433 12
Q ss_pred eeEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 266 LVFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 266 vpFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
+.|. ..+..-..+. ..=+.|+.+ ..|||+.+... ..+|+.+ +.|+|.-.+++.
T Consensus 91 ~~~~----~~d~~~~~~~-~~fD~v~~~--~~l~~~~~~~~-~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 91 FSIT----EGDFLSFEVP-TSIDTIVST--YAFHHLTDDEK-NVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp CCEE----SCCSSSCCCC-SCCSEEEEE--SCGGGSCHHHH-HHHHHHHHHHSCTTCEEEEE
T ss_pred eEEE----eCChhhcCCC-CCeEEEEEC--cchhcCChHHH-HHHHHHHHHhcCCCCEEEEE
Confidence 4332 2221111122 233455544 45788876532 3355444 678997655554
No 39
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=85.70 E-value=11 Score=35.47 Aligned_cols=111 Identities=9% Similarity=0.049 Sum_probs=67.2
Q ss_pred HHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe
Q 041748 187 NQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL 266 (479)
Q Consensus 187 NqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv 266 (479)
.+.+++.+... +.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++. ..+ +
T Consensus 109 ~~~~~~~~~~~-----~~~~vLD~GcG~G~----~~~~l~~~----g---~~v~~vD~s~~~~~~a~~~~~----~~~-~ 167 (286)
T 3m70_A 109 HGDVVDAAKII-----SPCKVLDLGCGQGR----NSLYLSLL----G---YDVTSWDHNENSIAFLNETKE----KEN-L 167 (286)
T ss_dssp CHHHHHHHHHS-----CSCEEEEESCTTCH----HHHHHHHT----T---CEEEEEESCHHHHHHHHHHHH----HTT-C
T ss_pred HHHHHHHhhcc-----CCCcEEEECCCCCH----HHHHHHHC----C---CeEEEEECCHHHHHHHHHHHH----HcC-C
Confidence 34666776542 46789999999994 45556665 2 389999998887777766544 344 5
Q ss_pred eEEEEEeeccceeccccCCCC--cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 267 VFEFQGLIRGSRLVNIRKKKH--ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 267 pFeF~~v~~~~~l~~L~~~~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
..+|.. .+. ..+.. ++ +.|+.|. .+||+.+. ....+|+.+ +.|+|.-++++.
T Consensus 168 ~~~~~~--~d~--~~~~~-~~~fD~i~~~~--~~~~~~~~-~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 168 NISTAL--YDI--NAANI-QENYDFIVSTV--VFMFLNRE-RVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp CEEEEE--CCG--GGCCC-CSCEEEEEECS--SGGGSCGG-GHHHHHHHHHHTEEEEEEEEEE
T ss_pred ceEEEE--ecc--ccccc-cCCccEEEEcc--chhhCCHH-HHHHHHHHHHHhcCCCcEEEEE
Confidence 444432 222 12222 33 3444444 46888543 445666655 678998764443
No 40
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=85.44 E-value=15 Score=33.23 Aligned_cols=117 Identities=18% Similarity=0.083 Sum_probs=67.7
Q ss_pred HHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe
Q 041748 187 NQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL 266 (479)
Q Consensus 187 NqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv 266 (479)
-+.|.+.+.... .+.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++.. .+ +
T Consensus 24 ~~~~~~~l~~~~---~~~~~vLdiG~G~G~----~~~~l~~~---~----~~~~~~D~s~~~~~~a~~~~~~----~~-~ 84 (246)
T 1y8c_A 24 SDFIIEKCVENN---LVFDDYLDLACGTGN----LTENLCPK---F----KNTWAVDLSQEMLSEAENKFRS----QG-L 84 (246)
T ss_dssp HHHHHHHHHTTT---CCTTEEEEETCTTST----THHHHGGG---S----SEEEEECSCHHHHHHHHHHHHH----TT-C
T ss_pred HHHHHHHHHHhC---CCCCeEEEeCCCCCH----HHHHHHHC---C----CcEEEEECCHHHHHHHHHHHhh----cC-C
Confidence 344555554310 135689999999985 34456655 2 3799999988888777766543 33 3
Q ss_pred eEEEEEeeccceeccccCCCCcEEEEeecc-ccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 267 VFEFQGLIRGSRLVNIRKKKHETVAANLVF-HLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 267 pFeF~~v~~~~~l~~L~~~~~EaLaVN~~~-~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
..+|. ..+. ..+... +..=+|-|.. .|||+.+......+|+.+ +.|+|.-+++++.
T Consensus 85 ~~~~~--~~d~--~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 85 KPRLA--CQDI--SNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp CCEEE--CCCG--GGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CeEEE--eccc--ccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 33443 2222 122222 2221222334 588886544556777766 5689987777653
No 41
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=84.73 E-value=8.2 Score=35.08 Aligned_cols=112 Identities=19% Similarity=0.216 Sum_probs=63.3
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV 267 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp 267 (479)
+.|++.+...- .+.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++. .. ..
T Consensus 41 ~~~~~~l~~~~---~~~~~vLDiG~G~G~----~~~~l~~~---~----~~v~~vD~s~~~~~~a~~~~----~~---~~ 99 (242)
T 3l8d_A 41 STIIPFFEQYV---KKEAEVLDVGCGDGY----GTYKLSRT---G----YKAVGVDISEVMIQKGKERG----EG---PD 99 (242)
T ss_dssp TTHHHHHHHHS---CTTCEEEEETCTTSH----HHHHHHHT---T----CEEEEEESCHHHHHHHHTTT----CB---TT
T ss_pred HHHHHHHHHHc---CCCCeEEEEcCCCCH----HHHHHHHc---C----CeEEEEECCHHHHHHHHhhc----cc---CC
Confidence 34555554321 134689999999994 45566665 2 37999999887776665542 21 23
Q ss_pred EEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 268 FEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 268 FeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
.+|.. .+ ...+...++..=+|-|...|||+.+. ..+|+.+ +.|+|.-++++..
T Consensus 100 ~~~~~--~d--~~~~~~~~~~fD~v~~~~~l~~~~~~---~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 100 LSFIK--GD--LSSLPFENEQFEAIMAINSLEWTEEP---LRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp EEEEE--CB--TTBCSSCTTCEEEEEEESCTTSSSCH---HHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEE--cc--hhcCCCCCCCccEEEEcChHhhccCH---HHHHHHHHHHhCCCeEEEEEE
Confidence 34432 21 11233333434344455668888543 3455544 6789977665543
No 42
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=84.61 E-value=23 Score=32.08 Aligned_cols=106 Identities=11% Similarity=0.036 Sum_probs=60.7
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccc-e-e
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGS-R-L 279 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~-~-l 279 (479)
.-+|+|+|.+.|.- ...||.. -++.-+||+|+.+...++.+.+++... | +. .+|. ..+. + +
T Consensus 59 ~~~vLdiG~G~G~~----~~~la~~----~~~~~~v~~vD~~~~~~~~a~~~~~~~----~-~~~~v~~~--~~d~~~~l 123 (221)
T 3u81_A 59 PSLVLELGAYCGYS----AVRMARL----LQPGARLLTMEINPDCAAITQQMLNFA----G-LQDKVTIL--NGASQDLI 123 (221)
T ss_dssp CSEEEEECCTTSHH----HHHHHTT----SCTTCEEEEEESCHHHHHHHHHHHHHH----T-CGGGEEEE--ESCHHHHG
T ss_pred CCEEEEECCCCCHH----HHHHHHh----CCCCCEEEEEeCChHHHHHHHHHHHHc----C-CCCceEEE--ECCHHHHH
Confidence 46899999999942 2234443 122469999999888887777665543 3 32 4443 3332 1 1
Q ss_pred ccccC----CCCcEEEEeeccccccccchhhhHHHHHHhHccCCcEEEEEeecC
Q 041748 280 VNIRK----KKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVEQEG 329 (479)
Q Consensus 280 ~~L~~----~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P~VvtlvE~ea 329 (479)
..+.- .+=+.|+++... ++.. ....++..++-|+|.-+++++.-.
T Consensus 124 ~~~~~~~~~~~fD~V~~d~~~--~~~~---~~~~~~~~~~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 124 PQLKKKYDVDTLDMVFLDHWK--DRYL---PDTLLLEKCGLLRKGTVLLADNVI 172 (221)
T ss_dssp GGTTTTSCCCCCSEEEECSCG--GGHH---HHHHHHHHTTCCCTTCEEEESCCC
T ss_pred HHHHHhcCCCceEEEEEcCCc--ccch---HHHHHHHhccccCCCeEEEEeCCC
Confidence 11211 223466665432 2221 223566666899999998886433
No 43
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=84.09 E-value=5.9 Score=36.90 Aligned_cols=98 Identities=17% Similarity=0.224 Sum_probs=60.7
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-.|+|+|.|.|. +...|+.+ + + ++|||+.+...++.+.+++. + +.|. ..+ ...+.
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~---~-~---~v~gvD~s~~~~~~a~~~~~------~-~~~~----~~d--~~~~~ 106 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS---F-G---TVEGLELSADMLAIARRRNP------D-AVLH----HGD--MRDFS 106 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT---S-S---EEEEEESCHHHHHHHHHHCT------T-SEEE----ECC--TTTCC
T ss_pred CCcEEEeCCcCCH----HHHHHHHc---C-C---eEEEEECCHHHHHHHHhhCC------C-CEEE----ECC--hHHCC
Confidence 4689999999993 45566665 2 2 79999998877766655421 2 4332 221 11122
Q ss_pred CCCCcEEEEeecc-ccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 284 KKKHETVAANLVF-HLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 284 ~~~~EaLaVN~~~-~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
. ++..=+|-|.+ .|||+.+......+|+.+ +.|+|.-+++++
T Consensus 107 ~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 L-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp C-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 33333333444 688987655556677666 568999888886
No 44
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=83.68 E-value=6.7 Score=38.68 Aligned_cols=110 Identities=7% Similarity=-0.050 Sum_probs=59.0
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe-
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL- 266 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv- 266 (479)
..|++.+.- .+.-+|+|+|.|.|. +...|+.+. |.+++|+++.+. .+. .. .++..+ +
T Consensus 174 ~~~~~~~~~-----~~~~~vLDvG~G~G~----~~~~l~~~~-----p~~~~~~~D~~~-~~~--~~----~~~~~~-~~ 231 (348)
T 3lst_A 174 LILARAGDF-----PATGTVADVGGGRGG----FLLTVLREH-----PGLQGVLLDRAE-VVA--RH----RLDAPD-VA 231 (348)
T ss_dssp HHHHHHSCC-----CSSEEEEEETCTTSH----HHHHHHHHC-----TTEEEEEEECHH-HHT--TC----CCCCGG-GT
T ss_pred HHHHHhCCc-----cCCceEEEECCccCH----HHHHHHHHC-----CCCEEEEecCHH-Hhh--cc----cccccC-CC
Confidence 356666532 246799999999993 456666661 368899998732 222 11 111111 1
Q ss_pred -eEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEE-EEee
Q 041748 267 -VFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVT-LVEQ 327 (479)
Q Consensus 267 -pFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvt-lvE~ 327 (479)
..+|..- +.. ..+. .-++++.+. .||++.+. ....+|+.+ +.|+|.-.+ ++|.
T Consensus 232 ~~v~~~~~--d~~-~~~p--~~D~v~~~~--vlh~~~d~-~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 232 GRWKVVEG--DFL-REVP--HADVHVLKR--ILHNWGDE-DSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp TSEEEEEC--CTT-TCCC--CCSEEEEES--CGGGSCHH-HHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred CCeEEEec--CCC-CCCC--CCcEEEEeh--hccCCCHH-HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 2444432 111 1122 334555444 47888764 334666666 678997544 4443
No 45
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=82.94 E-value=5.6 Score=36.74 Aligned_cols=100 Identities=14% Similarity=0.192 Sum_probs=59.5
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+.-.|+|+|.|.|. +...|+.+ ++ . ++|||+.+...++.+.+++. .. ..+|.. .+ ...+
T Consensus 44 ~~~~vLD~GcG~G~----~~~~l~~~----~~-~-~v~~vD~s~~~~~~a~~~~~-----~~--~~~~~~--~d--~~~~ 102 (253)
T 3g5l_A 44 NQKTVLDLGCGFGW----HCIYAAEH----GA-K-KVLGIDLSERMLTEAKRKTT-----SP--VVCYEQ--KA--IEDI 102 (253)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHT----TC-S-EEEEEESCHHHHHHHHHHCC-----CT--TEEEEE--CC--GGGC
T ss_pred CCCEEEEECCCCCH----HHHHHHHc----CC-C-EEEEEECCHHHHHHHHHhhc-----cC--CeEEEE--cc--hhhC
Confidence 45789999999993 55556665 22 2 89999998877776665543 12 233332 21 1223
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
...++..=+|-|...|||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 103 ~~~~~~fD~v~~~~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 103 AIEPDAYNVVLSSLALHYIAS---FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp CCCTTCEEEEEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCeEEEEEchhhhhhhh---HHHHHHHHHHHcCCCcEEEEE
Confidence 333343333334446888844 34666665 568998777765
No 46
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=82.62 E-value=6 Score=35.23 Aligned_cols=111 Identities=19% Similarity=0.198 Sum_probs=63.4
Q ss_pred HHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe
Q 041748 187 NQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL 266 (479)
Q Consensus 187 NqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv 266 (479)
.+.|++.+..- ...-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+ ....|
T Consensus 34 ~~~~~~~l~~~----~~~~~vLdiG~G~G~----~~~~l~~~---~----~~v~~~D~s~~~~~~a~~------~~~~~- 91 (218)
T 3ou2_A 34 APAALERLRAG----NIRGDVLELASGTGY----WTRHLSGL---A----DRVTALDGSAEMIAEAGR------HGLDN- 91 (218)
T ss_dssp HHHHHHHHTTT----TSCSEEEEESCTTSH----HHHHHHHH---S----SEEEEEESCHHHHHHHGG------GCCTT-
T ss_pred HHHHHHHHhcC----CCCCeEEEECCCCCH----HHHHHHhc---C----CeEEEEeCCHHHHHHHHh------cCCCC-
Confidence 55677777542 234599999999984 45556655 1 389999988776665554 22222
Q ss_pred eEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 267 VFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 267 pFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.+|. ..+. ..+ ..++..=+|-|...|||+.+. ....+|+.+ +.|+|.-.+++.
T Consensus 92 -~~~~--~~d~--~~~-~~~~~~D~v~~~~~l~~~~~~-~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 92 -VEFR--QQDL--FDW-TPDRQWDAVFFAHWLAHVPDD-RFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp -EEEE--ECCT--TSC-CCSSCEEEEEEESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEE
T ss_pred -eEEE--eccc--ccC-CCCCceeEEEEechhhcCCHH-HHHHHHHHHHHHcCCCeEEEEE
Confidence 3332 2222 122 223333233344568898763 345566555 678997655443
No 47
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=82.25 E-value=17 Score=31.63 Aligned_cols=110 Identities=15% Similarity=0.188 Sum_probs=63.2
Q ss_pred HHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe
Q 041748 187 NQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL 266 (479)
Q Consensus 187 NqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv 266 (479)
++.|++.+.-. +.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++... .+.
T Consensus 21 ~~~l~~~~~~~-----~~~~vLdiG~G~G~----~~~~l~~~---~----~~v~~vD~s~~~~~~a~~~~~~~--~~~-- 80 (199)
T 2xvm_A 21 HSEVLEAVKVV-----KPGKTLDLGCGNGR----NSLYLAAN---G----YDVDAWDKNAMSIANVERIKSIE--NLD-- 80 (199)
T ss_dssp CHHHHHHTTTS-----CSCEEEEETCTTSH----HHHHHHHT---T----CEEEEEESCHHHHHHHHHHHHHH--TCT--
T ss_pred cHHHHHHhhcc-----CCCeEEEEcCCCCH----HHHHHHHC---C----CeEEEEECCHHHHHHHHHHHHhC--CCC--
Confidence 34666666542 34599999999884 34456654 2 38999999888777777665432 122
Q ss_pred eEEEEEeeccceeccccCCCC--cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEE
Q 041748 267 VFEFQGLIRGSRLVNIRKKKH--ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTL 324 (479)
Q Consensus 267 pFeF~~v~~~~~l~~L~~~~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtl 324 (479)
..+|. ..+. ..+.. ++ +.|+.+ ..+||+..+ ....+|+.+ +.|+|.-.++
T Consensus 81 ~~~~~--~~d~--~~~~~-~~~~D~v~~~--~~l~~~~~~-~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 81 NLHTR--VVDL--NNLTF-DRQYDFILST--VVLMFLEAK-TIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp TEEEE--ECCG--GGCCC-CCCEEEEEEE--SCGGGSCGG-GHHHHHHHHHHTEEEEEEEE
T ss_pred CcEEE--Ecch--hhCCC-CCCceEEEEc--chhhhCCHH-HHHHHHHHHHHhcCCCeEEE
Confidence 23333 2222 11222 33 344433 347787633 345566655 6789986643
No 48
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=82.22 E-value=5.2 Score=36.73 Aligned_cols=104 Identities=10% Similarity=0.043 Sum_probs=59.7
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+.-+|+|+|.|.|. +...|+.+ + ..++|+|+.+...++.+.+++... +++ +|. ..+. ..+
T Consensus 93 ~~~~vLDiG~G~G~----~~~~l~~~---~---~~~v~~vD~s~~~~~~a~~~~~~~----~~~--~~~--~~d~--~~~ 152 (254)
T 1xtp_A 93 GTSRALDCGAGIGR----ITKNLLTK---L---YATTDLLEPVKHMLEEAKRELAGM----PVG--KFI--LASM--ETA 152 (254)
T ss_dssp CCSEEEEETCTTTH----HHHHTHHH---H---CSEEEEEESCHHHHHHHHHHTTTS----SEE--EEE--ESCG--GGC
T ss_pred CCCEEEEECCCcCH----HHHHHHHh---h---cCEEEEEeCCHHHHHHHHHHhccC----Cce--EEE--EccH--HHC
Confidence 45789999999995 44455555 1 247999999887777666554322 323 332 2222 222
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
...++..=+|-|...|||+.+. ....+|+.+ +.|+|.-.+++..
T Consensus 153 ~~~~~~fD~v~~~~~l~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 153 TLPPNTYDLIVIQWTAIYLTDA-DFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp CCCSSCEEEEEEESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCeEEEEEcchhhhCCHH-HHHHHHHHHHHhcCCCeEEEEEe
Confidence 2333323233344468898653 344555554 6789976665543
No 49
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=81.84 E-value=5.7 Score=37.97 Aligned_cols=107 Identities=9% Similarity=0.046 Sum_probs=61.0
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eecc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVN 281 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~ 281 (479)
+.-+|+|+|.|.| .+...|+.+- ++..++|||+.+...++.+.+++.......+ ..+|.. .+. ++..
T Consensus 36 ~~~~vLDiGcG~G----~~~~~la~~~----~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~--~v~~~~--~d~~~~~~ 103 (299)
T 3g5t_A 36 ERKLLVDVGCGPG----TATLQMAQEL----KPFEQIIGSDLSATMIKTAEVIKEGSPDTYK--NVSFKI--SSSDDFKF 103 (299)
T ss_dssp CCSEEEEETCTTT----HHHHHHHHHS----SCCSEEEEEESCHHHHHHHHHHHHHCC-CCT--TEEEEE--CCTTCCGG
T ss_pred CCCEEEEECCCCC----HHHHHHHHhC----CCCCEEEEEeCCHHHHHHHHHHHHhccCCCC--ceEEEE--cCHHhCCc
Confidence 4678999999998 3445555431 1246899999998888887776655411112 344432 222 1110
Q ss_pred c---cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 282 I---RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 282 L---~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
. .+..+..=+|-|...+||+ + ...+|..+ +.|+|.-.+++
T Consensus 104 ~~~~~~~~~~fD~V~~~~~l~~~-~---~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 104 LGADSVDKQKIDMITAVECAHWF-D---FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GCTTTTTSSCEEEEEEESCGGGS-C---HHHHHHHHHHHEEEEEEEEE
T ss_pred cccccccCCCeeEEeHhhHHHHh-C---HHHHHHHHHHhcCCCcEEEE
Confidence 0 1112444444555568888 3 34555554 56889866655
No 50
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=81.77 E-value=12 Score=36.05 Aligned_cols=112 Identities=12% Similarity=0.041 Sum_probs=63.8
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhc---CCeeEEEEEeecccee
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSF---RNLVFEFQGLIRGSRL 279 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~l---gnvpFeF~~v~~~~~l 279 (479)
+.-+|+|+|.|.|. +...|+.+ + .-++|||+.+...++.+.+++....... +....+|. ..+...
T Consensus 34 ~~~~VLDlGcG~G~----~~~~l~~~--~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~--~~D~~~ 101 (313)
T 3bgv_A 34 RDITVLDLGCGKGG----DLLKWKKG--R----INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFI--TADSSK 101 (313)
T ss_dssp -CCEEEEETCTTTT----THHHHHHT--T----CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEE--ECCTTT
T ss_pred CCCEEEEECCCCcH----HHHHHHhc--C----CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEE--Eecccc
Confidence 35689999999985 23344444 1 2489999999888888887765543110 10133443 332211
Q ss_pred cc----ccCCCCcEEEEeeccccccc-cchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 280 VN----IRKKKHETVAANLVFHLNTL-KIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 280 ~~----L~~~~~EaLaVN~~~~Lh~L-~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.. +...++..=+|-|.+.||++ .+......+|..+ +.|+|.-+++..
T Consensus 102 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 102 ELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp SCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 11 21122223233345568887 4444556777776 568998776654
No 51
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=81.48 E-value=12 Score=34.26 Aligned_cols=129 Identities=11% Similarity=0.004 Sum_probs=72.7
Q ss_pred HHHhcCCCccchhhhhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHH
Q 041748 171 DLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQ 250 (479)
Q Consensus 171 ~f~e~sP~~kfah~tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~ 250 (479)
.+|+..+-..-.+...-..+++.+.+- .+.-+|+|+|.|.|. +...|+.+ . | . ++|||+.+...++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~~vLDiG~G~G~----~~~~l~~~--~--~-~-~v~~vD~s~~~~~ 83 (257)
T 3f4k_A 18 NYFKLLKRQGPGSPEATRKAVSFINEL----TDDAKIADIGCGTGG----QTLFLADY--V--K-G-QITGIDLFPDFIE 83 (257)
T ss_dssp HHHTTSSCSSSCCHHHHHHHHTTSCCC----CTTCEEEEETCTTSH----HHHHHHHH--C--C-S-EEEEEESCHHHHH
T ss_pred HHHcCccccCCCCHHHHHHHHHHHhcC----CCCCeEEEeCCCCCH----HHHHHHHh--C--C-C-eEEEEECCHHHHH
Confidence 344444444444444444555555332 134689999999984 45556666 1 2 2 8999999888777
Q ss_pred HHHHHHHHHHhhcCCee--EEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 251 ETENRLVSFSKSFRNLV--FEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 251 etg~rL~~fA~~lgnvp--FeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.+.+++. ..| ++ .+|. ..+. ..+...++..=+|-|...+||+ + ...+|+.+ +-|+|.-.+++.
T Consensus 84 ~a~~~~~----~~~-~~~~~~~~--~~d~--~~~~~~~~~fD~v~~~~~l~~~-~---~~~~l~~~~~~L~pgG~l~~~ 149 (257)
T 3f4k_A 84 IFNENAV----KAN-CADRVKGI--TGSM--DNLPFQNEELDLIWSEGAIYNI-G---FERGMNEWSKYLKKGGFIAVS 149 (257)
T ss_dssp HHHHHHH----HTT-CTTTEEEE--ECCT--TSCSSCTTCEEEEEEESCSCCC-C---HHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHH----HcC-CCCceEEE--ECCh--hhCCCCCCCEEEEEecChHhhc-C---HHHHHHHHHHHcCCCcEEEEE
Confidence 7766554 334 43 4553 2222 2233333433333344457887 2 34566655 568997665554
No 52
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=81.43 E-value=3.5 Score=37.34 Aligned_cols=107 Identities=11% Similarity=0.062 Sum_probs=59.7
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe-eEEEEEeeccceecc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL-VFEFQGLIRGSRLVN 281 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv-pFeF~~v~~~~~l~~ 281 (479)
+.-+|+|+|.|.|. +...|+.+ . |..++|||+.+...++.+.++..+-++..+ + ..+|. ..+. ..
T Consensus 27 ~~~~vLDiGcG~G~----~~~~la~~--~---p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~-~~~v~~~--~~d~--~~ 92 (218)
T 3mq2_A 27 YDDVVLDVGTGDGK----HPYKVARQ--N---PSRLVVALDADKSRMEKISAKAAAKPAKGG-LPNLLYL--WATA--ER 92 (218)
T ss_dssp SSEEEEEESCTTCH----HHHHHHHH--C---TTEEEEEEESCGGGGHHHHHHHTSCGGGTC-CTTEEEE--ECCS--TT
T ss_pred CCCEEEEecCCCCH----HHHHHHHH--C---CCCEEEEEECCHHHHHHHHHHHHHhhhhcC-CCceEEE--ecch--hh
Confidence 45789999999993 44456655 1 347999999988877766555444444444 3 24443 2222 11
Q ss_pred ccCCCC-cEEEEeeccc-c--ccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 282 IRKKKH-ETVAANLVFH-L--NTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 282 L~~~~~-EaLaVN~~~~-L--h~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
+....+ +.+.+...+. + ||+.+. ..+|+.+ +-|+|.-.+++.
T Consensus 93 l~~~~~~d~v~~~~~~~~~~~~~~~~~---~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 93 LPPLSGVGELHVLMPWGSLLRGVLGSS---PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp CCSCCCEEEEEEESCCHHHHHHHHTSS---SHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCCCCCEEEEEccchhhhhhhhccH---HHHHHHHHHHcCCCcEEEEE
Confidence 222221 3343333221 1 244332 3566555 678998887774
No 53
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=81.40 E-value=10 Score=36.55 Aligned_cols=100 Identities=13% Similarity=0.024 Sum_probs=58.3
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccceec
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGSRLV 280 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~~l~ 280 (479)
..-+|+|+|.|.| .+...|+.+. + .++|||+.+...++.+.+++.. .| ++ .+|.. .+. .
T Consensus 117 ~~~~vLDiGcG~G----~~~~~la~~~--~----~~v~gvD~s~~~~~~a~~~~~~----~~-~~~~v~~~~--~d~--~ 177 (312)
T 3vc1_A 117 PDDTLVDAGCGRG----GSMVMAHRRF--G----SRVEGVTLSAAQADFGNRRARE----LR-IDDHVRSRV--CNM--L 177 (312)
T ss_dssp TTCEEEEESCTTS----HHHHHHHHHH--C----CEEEEEESCHHHHHHHHHHHHH----TT-CTTTEEEEE--CCT--T
T ss_pred CCCEEEEecCCCC----HHHHHHHHHc--C----CEEEEEeCCHHHHHHHHHHHHH----cC-CCCceEEEE--CCh--h
Confidence 3568999999988 3445566652 1 4799999988878777766543 33 33 44432 222 1
Q ss_pred cccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 281 NIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 281 ~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
.+...++..=+|-+...+||+ + ...+|+.+ +.|+|.-.+++
T Consensus 178 ~~~~~~~~fD~V~~~~~l~~~-~---~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 178 DTPFDKGAVTASWNNESTMYV-D---LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp SCCCCTTCEEEEEEESCGGGS-C---HHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCCCCEeEEEECCchhhC-C---HHHHHHHHHHHcCCCcEEEE
Confidence 222233333233334457887 3 45566555 57899765544
No 54
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=81.29 E-value=6.8 Score=38.15 Aligned_cols=101 Identities=12% Similarity=0.016 Sum_probs=64.6
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
--.|+|+|.|.| +=+++-+ |..+++|++-+...++-+.+ ++...| +++.|...-.... .-
T Consensus 106 p~~VLDlGCG~g------pLal~~~------~~~~y~a~DId~~~i~~ar~----~~~~~g-~~~~~~v~D~~~~---~~ 165 (253)
T 3frh_A 106 PRRVLDIACGLN------PLALYER------GIASVWGCDIHQGLGDVITP----FAREKD-WDFTFALQDVLCA---PP 165 (253)
T ss_dssp CSEEEEETCTTT------HHHHHHT------TCSEEEEEESBHHHHHHHHH----HHHHTT-CEEEEEECCTTTS---CC
T ss_pred CCeEEEecCCcc------HHHHHhc------cCCeEEEEeCCHHHHHHHHH----HHHhcC-CCceEEEeecccC---CC
Confidence 348999999988 2233322 35789999988776655544 455666 8998864322111 11
Q ss_pred CCCCcEEEEeeccccccccchhhhHHHHHHhHccCCcEEEEEee
Q 041748 284 KKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVEQ 327 (479)
Q Consensus 284 ~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P~VvtlvE~ 327 (479)
..+.+++.++-. +|+|.+... ...++.+..|+|..|+|.=+
T Consensus 166 ~~~~DvvLllk~--lh~LE~q~~-~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 166 AEAGDLALIFKL--LPLLEREQA-GSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp CCBCSEEEEESC--HHHHHHHST-THHHHHHHHCBCSEEEEEEE
T ss_pred CCCcchHHHHHH--HHHhhhhch-hhHHHHHHHhcCCCEEEEcC
Confidence 224566666665 688865533 34558888999998877755
No 55
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=81.23 E-value=11 Score=35.77 Aligned_cols=103 Identities=14% Similarity=0.017 Sum_probs=59.8
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+.-+|+|+|.|.|. +...|+.+. + .++|||+.+...++.+.+++...- +. -..+|.. .+. ..+
T Consensus 82 ~~~~vLDiGcG~G~----~~~~l~~~~--~----~~v~gvD~s~~~~~~a~~~~~~~~--~~-~~~~~~~--~d~--~~~ 144 (297)
T 2o57_A 82 RQAKGLDLGAGYGG----AARFLVRKF--G----VSIDCLNIAPVQNKRNEEYNNQAG--LA-DNITVKY--GSF--LEI 144 (297)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHHH--C----CEEEEEESCHHHHHHHHHHHHHHT--CT-TTEEEEE--CCT--TSC
T ss_pred CCCEEEEeCCCCCH----HHHHHHHHh--C----CEEEEEeCCHHHHHHHHHHHHhcC--CC-cceEEEE--cCc--ccC
Confidence 35699999999884 344455541 1 389999998887877776654322 11 1244432 222 123
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
...++..=+|-+...|||+.+ ...+|+.+ +-|+|.-.+++
T Consensus 145 ~~~~~~fD~v~~~~~l~~~~~---~~~~l~~~~~~LkpgG~l~~ 185 (297)
T 2o57_A 145 PCEDNSYDFIWSQDAFLHSPD---KLKVFQECARVLKPRGVMAI 185 (297)
T ss_dssp SSCTTCEEEEEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCEeEEEecchhhhcCC---HHHHHHHHHHHcCCCeEEEE
Confidence 333443434445556888876 34556555 56889755444
No 56
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=81.15 E-value=5.3 Score=36.17 Aligned_cols=108 Identities=14% Similarity=0.086 Sum_probs=61.9
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV 267 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp 267 (479)
+.+++.+... .+.-+|+|+|.|.|. +...|+.+ ++ ++|||+.+...++.+.+++.. + +.
T Consensus 31 ~~~~~~l~~~----~~~~~vLDiGcG~G~----~~~~l~~~----~~---~v~gvD~s~~~~~~a~~~~~~-----~-v~ 89 (250)
T 2p7i_A 31 PFMVRAFTPF----FRPGNLLELGSFKGD----FTSRLQEH----FN---DITCVEASEEAISHAQGRLKD-----G-IT 89 (250)
T ss_dssp HHHHHHHGGG----CCSSCEEEESCTTSH----HHHHHTTT----CS---CEEEEESCHHHHHHHHHHSCS-----C-EE
T ss_pred HHHHHHHHhh----cCCCcEEEECCCCCH----HHHHHHHh----CC---cEEEEeCCHHHHHHHHHhhhC-----C-eE
Confidence 4566666532 134569999999983 45566665 22 699999988776665544321 2 33
Q ss_pred EEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHhH--ccCCcEEEEEe
Q 041748 268 FEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLVR--SIKPTIVTLVE 326 (479)
Q Consensus 268 FeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir--~L~P~VvtlvE 326 (479)
| . ..+. ..+ ..++..=+|-|...|||+.+. ..+|+.++ -|+|.-.+++.
T Consensus 90 ~--~--~~d~--~~~-~~~~~fD~v~~~~~l~~~~~~---~~~l~~~~~~~LkpgG~l~i~ 140 (250)
T 2p7i_A 90 Y--I--HSRF--EDA-QLPRRYDNIVLTHVLEHIDDP---VALLKRINDDWLAEGGRLFLV 140 (250)
T ss_dssp E--E--ESCG--GGC-CCSSCEEEEEEESCGGGCSSH---HHHHHHHHHTTEEEEEEEEEE
T ss_pred E--E--EccH--HHc-CcCCcccEEEEhhHHHhhcCH---HHHHHHHHHHhcCCCCEEEEE
Confidence 3 2 2222 112 223323233344568898653 46776665 68997655553
No 57
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=81.00 E-value=12 Score=34.81 Aligned_cols=131 Identities=10% Similarity=-0.033 Sum_probs=74.4
Q ss_pred HHHHHhcCCCccchhhhhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHH
Q 041748 169 FTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEE 248 (479)
Q Consensus 169 ~~~f~e~sP~~kfah~tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~ 248 (479)
+..+|+..+...-.+...-..+++.+..- .+.-+|+|+|.|.| .+...|+.+ |..++|||+.+...
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~~vLDiGcG~G----~~~~~la~~------~~~~v~gvD~s~~~ 81 (267)
T 3kkz_A 16 ICDFFSNMERQGPGSPEVTLKALSFIDNL----TEKSLIADIGCGTG----GQTMVLAGH------VTGQVTGLDFLSGF 81 (267)
T ss_dssp HHHHHHTSSCSSSCCHHHHHHHHTTCCCC----CTTCEEEEETCTTC----HHHHHHHTT------CSSEEEEEESCHHH
T ss_pred HHHHHhhccccCCCCHHHHHHHHHhcccC----CCCCEEEEeCCCCC----HHHHHHHhc------cCCEEEEEeCCHHH
Confidence 34455555554444444444555555421 24578999999988 345556655 23589999999888
Q ss_pred HHHHHHHHHHHHhhcCCee--EEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 249 LQETENRLVSFSKSFRNLV--FEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 249 l~etg~rL~~fA~~lgnvp--FeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
++.+.+++.. .| ++ .+|.. .+. ..+...++..=+|-|...+||+ + ...+|+.+ +.|+|.-.+++
T Consensus 82 ~~~a~~~~~~----~~-~~~~v~~~~--~d~--~~~~~~~~~fD~i~~~~~~~~~-~---~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 82 IDIFNRNARQ----SG-LQNRVTGIV--GSM--DDLPFRNEELDLIWSEGAIYNI-G---FERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp HHHHHHHHHH----TT-CTTTEEEEE--CCT--TSCCCCTTCEEEEEESSCGGGT-C---HHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHHH----cC-CCcCcEEEE--cCh--hhCCCCCCCEEEEEEcCCceec-C---HHHHHHHHHHHcCCCCEEEE
Confidence 8777766543 33 43 45532 222 1222333433334444557887 3 34556555 67899866555
Q ss_pred e
Q 041748 326 E 326 (479)
Q Consensus 326 E 326 (479)
.
T Consensus 149 ~ 149 (267)
T 3kkz_A 149 S 149 (267)
T ss_dssp E
T ss_pred E
Confidence 4
No 58
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=79.99 E-value=6.3 Score=38.39 Aligned_cols=104 Identities=12% Similarity=-0.016 Sum_probs=60.9
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
..+|+|+|.|.| .+...|+.+. |.+++|+++. ...++.+.+++.+.. +. =..+|.... .. ..+.
T Consensus 170 ~~~vlDvG~G~G----~~~~~l~~~~-----p~~~~~~~D~-~~~~~~a~~~~~~~~--~~-~~v~~~~~d--~~-~~~p 233 (332)
T 3i53_A 170 LGHVVDVGGGSG----GLLSALLTAH-----EDLSGTVLDL-QGPASAAHRRFLDTG--LS-GRAQVVVGS--FF-DPLP 233 (332)
T ss_dssp GSEEEEETCTTS----HHHHHHHHHC-----TTCEEEEEEC-HHHHHHHHHHHHHTT--CT-TTEEEEECC--TT-SCCC
T ss_pred CCEEEEeCCChh----HHHHHHHHHC-----CCCeEEEecC-HHHHHHHHHhhhhcC--cC-cCeEEecCC--CC-CCCC
Confidence 579999999999 5566677661 3579999988 677777776665421 11 124454321 11 1111
Q ss_pred CCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEE-EEee
Q 041748 284 KKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVT-LVEQ 327 (479)
Q Consensus 284 ~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvt-lvE~ 327 (479)
. .-++++.+ .-||+..++ ....+|+.+ +.|+|.-.+ ++|.
T Consensus 234 ~-~~D~v~~~--~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 234 A-GAGGYVLS--AVLHDWDDL-SAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp C-SCSEEEEE--SCGGGSCHH-HHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred C-CCcEEEEe--hhhccCCHH-HHHHHHHHHHHhcCCCCEEEEEee
Confidence 1 23444444 347888765 345666665 568997544 4443
No 59
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=79.70 E-value=2.8 Score=40.42 Aligned_cols=47 Identities=19% Similarity=0.344 Sum_probs=32.7
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSF 259 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~f 259 (479)
.-.|+|+|.+.| .+...|+.+ -+ ..+||||+.+...++.+.+++...
T Consensus 47 ~~~VLDiGCG~G----~~~~~la~~--~~---~~~v~gvDis~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 47 GRDVLDLGCNVG----HLTLSIACK--WG---PSRMVGLDIDSRLIHSARQNIRHY 93 (292)
T ss_dssp TSEEEEESCTTC----HHHHHHHHH--TC---CSEEEEEESCHHHHHHHHHTC---
T ss_pred CCcEEEeCCCCC----HHHHHHHHH--cC---CCEEEEECCCHHHHHHHHHHHHhh
Confidence 458999999999 345556665 11 249999999888888777766544
No 60
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=79.37 E-value=9.7 Score=35.88 Aligned_cols=100 Identities=11% Similarity=0.148 Sum_probs=57.6
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe--eEEEEEeeccceec
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL--VFEFQGLIRGSRLV 280 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv--pFeF~~v~~~~~l~ 280 (479)
+.-+|+|+|.|.|. +...|+.+. | .++|||+.+...++.+.+++.+ .| + ..+|. ..+. .
T Consensus 64 ~~~~vLDiGcG~G~----~~~~l~~~~--~----~~v~gvd~s~~~~~~a~~~~~~----~~-~~~~~~~~--~~d~--~ 124 (287)
T 1kpg_A 64 PGMTLLDVGCGWGA----TMMRAVEKY--D----VNVVGLTLSKNQANHVQQLVAN----SE-NLRSKRVL--LAGW--E 124 (287)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHHH--C----CEEEEEESCHHHHHHHHHHHHT----CC-CCSCEEEE--ESCG--G
T ss_pred CcCEEEEECCcccH----HHHHHHHHc--C----CEEEEEECCHHHHHHHHHHHHh----cC-CCCCeEEE--ECCh--h
Confidence 35689999998874 555666542 2 2899999988877777665532 33 2 23332 2222 1
Q ss_pred cccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 281 NIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 281 ~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
.+. ..=+.|+.+. .|||+.+. ....+|+.+ +-|+|.-.+++
T Consensus 125 ~~~-~~fD~v~~~~--~l~~~~~~-~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 125 QFD-EPVDRIVSIG--AFEHFGHE-RYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp GCC-CCCSEEEEES--CGGGTCTT-THHHHHHHHHHHSCTTCEEEE
T ss_pred hCC-CCeeEEEEeC--chhhcChH-HHHHHHHHHHHhcCCCCEEEE
Confidence 222 2223444333 47888642 334556554 66899755444
No 61
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=79.10 E-value=18 Score=31.80 Aligned_cols=108 Identities=12% Similarity=0.071 Sum_probs=63.1
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe-eEEEEEeeccc-eec-
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL-VFEFQGLIRGS-RLV- 280 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv-pFeF~~v~~~~-~l~- 280 (479)
.-+|+|+|.|.|.- ...++.+ + .-++|||+.+...++.+.+++... + + ..+|. ..+. +..
T Consensus 45 ~~~vLDlgcG~G~~----~~~~~~~--~----~~~v~~vD~~~~~~~~a~~~~~~~----~-~~~v~~~--~~d~~~~~~ 107 (189)
T 3p9n_A 45 GLAVLDLYAGSGAL----GLEALSR--G----AASVLFVESDQRSAAVIARNIEAL----G-LSGATLR--RGAVAAVVA 107 (189)
T ss_dssp TCEEEEETCTTCHH----HHHHHHT--T----CSEEEEEECCHHHHHHHHHHHHHH----T-CSCEEEE--ESCHHHHHH
T ss_pred CCEEEEeCCCcCHH----HHHHHHC--C----CCeEEEEECCHHHHHHHHHHHHHc----C-CCceEEE--EccHHHHHh
Confidence 35799999999932 2223334 1 248999999988888777665443 3 3 23332 2322 111
Q ss_pred cccCCCCcEEEEeeccccccccchhhhHHHHHHhH---ccCCcEEEEEeecCCCC
Q 041748 281 NIRKKKHETVAANLVFHLNTLKIYLKISDTLNLVR---SIKPTIVTLVEQEGSRS 332 (479)
Q Consensus 281 ~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir---~L~P~VvtlvE~ea~~n 332 (479)
.+.-..=+.++.|..+ |+.. .....+|..+. -|+|.-+++++.+....
T Consensus 108 ~~~~~~fD~i~~~~p~--~~~~--~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 108 AGTTSPVDLVLADPPY--NVDS--ADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HCCSSCCSEEEECCCT--TSCH--HHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred hccCCCccEEEECCCC--Ccch--hhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 1212233577777774 3321 23456666665 49999998888765443
No 62
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=78.91 E-value=3.7 Score=43.92 Aligned_cols=88 Identities=20% Similarity=0.225 Sum_probs=53.8
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+-+.|+|+|.|-|. |-..||.+ | -++|||+.+...++.+.. .|+.-|.+..+|...... ++..
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~---g----a~V~giD~~~~~i~~a~~----~a~~~~~~~~~~~~~~~~-~~~~- 128 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK---G----ATIVGIDFQQENINVCRA----LAEENPDFAAEFRVGRIE-EVIA- 128 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT---T----CEEEEEESCHHHHHHHHH----HHHTSTTSEEEEEECCHH-HHHH-
T ss_pred CCCeEEEECCCCcH----HHHHHHhC---C----CEEEEECCCHHHHHHHHH----HHHhcCCCceEEEECCHH-HHhh-
Confidence 46899999999994 67788876 3 279999998887766543 344433245566533211 1211
Q ss_pred cCCCCcEEEEeeccccccccchhhh
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKI 307 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~ 307 (479)
...++..=+|-|+--|||+.+....
T Consensus 129 ~~~~~~fD~v~~~e~~ehv~~~~~~ 153 (569)
T 4azs_A 129 ALEEGEFDLAIGLSVFHHIVHLHGI 153 (569)
T ss_dssp HCCTTSCSEEEEESCHHHHHHHHCH
T ss_pred hccCCCccEEEECcchhcCCCHHHH
Confidence 1223334355566679999876433
No 63
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=78.48 E-value=16 Score=33.51 Aligned_cols=102 Identities=19% Similarity=0.257 Sum_probs=58.6
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-+|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.+++.. .+ +..+|.. .+. ..+.
T Consensus 42 ~~~vLDlGcG~G~----~~~~l~~~---~----~~v~gvD~s~~~l~~a~~~~~~----~~-~~v~~~~--~d~--~~~~ 101 (252)
T 1wzn_A 42 VRRVLDLACGTGI----PTLELAER---G----YEVVGLDLHEEMLRVARRKAKE----RN-LKIEFLQ--GDV--LEIA 101 (252)
T ss_dssp CCEEEEETCTTCH----HHHHHHHT---T----CEEEEEESCHHHHHHHHHHHHH----TT-CCCEEEE--SCG--GGCC
T ss_pred CCEEEEeCCCCCH----HHHHHHHC---C----CeEEEEECCHHHHHHHHHHHHh----cC-CceEEEE--CCh--hhcc
Confidence 4689999999994 34455654 2 3899999998888877766543 34 4444432 222 1122
Q ss_pred CCCCcE-EEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 284 KKKHET-VAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 284 ~~~~Ea-LaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
.. +.. +|+.....++++. ......+|+.+ +.|+|.-+++++-
T Consensus 102 ~~-~~fD~v~~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 102 FK-NEFDAVTMFFSTIMYFD-EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp CC-SCEEEEEECSSGGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cC-CCccEEEEcCCchhcCC-HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 22 222 3332211234443 23445666655 6699998888764
No 64
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=77.51 E-value=10 Score=36.14 Aligned_cols=102 Identities=9% Similarity=0.093 Sum_probs=61.7
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccceec
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGSRLV 280 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~~l~ 280 (479)
+.-+|+|+|.|.| .+...|+.+. | .++|||+.+...++.+.+++.. .| ++ .+|. ..+. .
T Consensus 72 ~~~~vLDiGcG~G----~~~~~la~~~--~----~~v~gvD~s~~~~~~a~~~~~~----~~-~~~~v~~~--~~d~--~ 132 (302)
T 3hem_A 72 PGMTLLDIGCGWG----STMRHAVAEY--D----VNVIGLTLSENQYAHDKAMFDE----VD-SPRRKEVR--IQGW--E 132 (302)
T ss_dssp TTCEEEEETCTTS----HHHHHHHHHH--C----CEEEEEECCHHHHHHHHHHHHH----SC-CSSCEEEE--ECCG--G
T ss_pred CcCEEEEeeccCc----HHHHHHHHhC--C----CEEEEEECCHHHHHHHHHHHHh----cC-CCCceEEE--ECCH--H
Confidence 3568999999877 3555666652 1 5799999998888777766543 34 43 3333 2222 1
Q ss_pred cccCCCCcEEEEeeccccccccch------hhhHHHHHHh-HccCCcEEEEEe
Q 041748 281 NIRKKKHETVAANLVFHLNTLKIY------LKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 281 ~L~~~~~EaLaVN~~~~Lh~L~~~------~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.+ -..=++|+.+ ..+||+.+. .....+|+.+ +-|+|.-.+++.
T Consensus 133 ~~-~~~fD~v~~~--~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 133 EF-DEPVDRIVSL--GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp GC-CCCCSEEEEE--SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEE
T ss_pred Hc-CCCccEEEEc--chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 23 1222455544 447888664 2345666655 679998665553
No 65
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=76.84 E-value=15 Score=33.17 Aligned_cols=102 Identities=15% Similarity=0.161 Sum_probs=60.3
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-.|+|+|.|.|. +...|+.+ .++|||+.+...++.+.+++.. .+ ...+|.. .+. ..+.
T Consensus 34 ~~~vLdiG~G~G~----~~~~l~~~--------~~v~~vD~s~~~~~~a~~~~~~----~~-~~~~~~~--~d~--~~~~ 92 (243)
T 3d2l_A 34 GKRIADIGCGTGT----ATLLLADH--------YEVTGVDLSEEMLEIAQEKAME----TN-RHVDFWV--QDM--RELE 92 (243)
T ss_dssp TCEEEEESCTTCH----HHHHHTTT--------SEEEEEESCHHHHHHHHHHHHH----TT-CCCEEEE--CCG--GGCC
T ss_pred CCeEEEecCCCCH----HHHHHhhC--------CeEEEEECCHHHHHHHHHhhhh----cC-CceEEEE--cCh--hhcC
Confidence 3589999999984 33445443 4899999998888777766543 22 3344432 221 1121
Q ss_pred CC-CCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 284 KK-KHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 284 ~~-~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
.. .=++|+.+. -.+||+.+......+|+.+ +.|+|.-.++++-
T Consensus 93 ~~~~fD~v~~~~-~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 93 LPEPVDAITILC-DSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp CSSCEEEEEECT-TGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCcCEEEEeC-CchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 22 113333322 2578886554556677665 5689998877753
No 66
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=76.07 E-value=23 Score=33.69 Aligned_cols=92 Identities=10% Similarity=0.050 Sum_probs=54.4
Q ss_pred eEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccccC
Q 041748 205 LHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIRK 284 (479)
Q Consensus 205 VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~~ 284 (479)
=.|+|+|.|.|. +...|+.+ + -++|||+.+...++ .|+..+||.| . ..+. ..+.+
T Consensus 41 ~~vLDvGcGtG~----~~~~l~~~---~----~~v~gvD~s~~ml~--------~a~~~~~v~~--~--~~~~--e~~~~ 95 (257)
T 4hg2_A 41 GDALDCGCGSGQ----ASLGLAEF---F----ERVHAVDPGEAQIR--------QALRHPRVTY--A--VAPA--EDTGL 95 (257)
T ss_dssp SEEEEESCTTTT----THHHHHTT---C----SEEEEEESCHHHHH--------TCCCCTTEEE--E--ECCT--TCCCC
T ss_pred CCEEEEcCCCCH----HHHHHHHh---C----CEEEEEeCcHHhhh--------hhhhcCCcee--e--hhhh--hhhcc
Confidence 468999999993 34556665 2 27899998876553 3455554543 2 2222 22444
Q ss_pred CCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 285 KKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 285 ~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
.++..=+|-|...+|++.. +.+|..+ |-|+|.-++++
T Consensus 96 ~~~sfD~v~~~~~~h~~~~----~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 96 PPASVDVAIAAQAMHWFDL----DRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp CSSCEEEEEECSCCTTCCH----HHHHHHHHHHEEEEEEEEE
T ss_pred cCCcccEEEEeeehhHhhH----HHHHHHHHHHcCCCCEEEE
Confidence 4554444555566788742 3455444 56899876544
No 67
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=75.95 E-value=9.9 Score=38.45 Aligned_cols=124 Identities=12% Similarity=0.065 Sum_probs=69.0
Q ss_pred hHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCC
Q 041748 186 ANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRN 265 (479)
Q Consensus 186 ANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgn 265 (479)
....+++.+... ..-+|+|+|.|.| .+...|+.+ . |..++|+|+.+...++.+.+++...--.-.
T Consensus 210 ~~~~ll~~l~~~-----~~~~VLDlGcG~G----~~s~~la~~--~---p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~- 274 (375)
T 4dcm_A 210 GARFFMQHLPEN-----LEGEIVDLGCGNG----VIGLTLLDK--N---PQAKVVFVDESPMAVASSRLNVETNMPEAL- 274 (375)
T ss_dssp HHHHHHHTCCCS-----CCSEEEEETCTTC----HHHHHHHHH--C---TTCEEEEEESCHHHHHHHHHHHHHHCGGGG-
T ss_pred HHHHHHHhCccc-----CCCeEEEEeCcch----HHHHHHHHH--C---CCCEEEEEECcHHHHHHHHHHHHHcCCCcC-
Confidence 445677777542 3478999999999 345556665 1 246899999998888887777654321111
Q ss_pred eeEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 266 LVFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 266 vpFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
+.++|.. .+.. ..+.-..=+.|+.|-.|+-..-........++..+ +.|+|.-.+++..
T Consensus 275 ~~v~~~~--~D~~-~~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 275 DRCEFMI--NNAL-SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp GGEEEEE--CSTT-TTCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEEe--chhh-ccCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 2355542 2220 01111122577778775322111111233566655 4589987777653
No 68
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=75.91 E-value=14 Score=34.24 Aligned_cols=101 Identities=16% Similarity=0.183 Sum_probs=58.9
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccceec
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGSRLV 280 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~~l~ 280 (479)
+.-+|+|+|.|.|. +...|+.+ .+ .++|||+.+...++.+.+++.. .| ++ .+|.. .+. .
T Consensus 61 ~~~~vLDiGcG~G~----~~~~l~~~--~~----~~v~gvD~s~~~~~~a~~~~~~----~~-~~~~~~~~~--~d~--~ 121 (273)
T 3bus_A 61 SGDRVLDVGCGIGK----PAVRLATA--RD----VRVTGISISRPQVNQANARATA----AG-LANRVTFSY--ADA--M 121 (273)
T ss_dssp TTCEEEEESCTTSH----HHHHHHHH--SC----CEEEEEESCHHHHHHHHHHHHH----TT-CTTTEEEEE--CCT--T
T ss_pred CCCEEEEeCCCCCH----HHHHHHHh--cC----CEEEEEeCCHHHHHHHHHHHHh----cC-CCcceEEEE--Ccc--c
Confidence 35699999999884 34456655 21 5899999988877776665543 33 32 44432 221 1
Q ss_pred cccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 281 NIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 281 ~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
.+...++..=+|-+...|||+.+. ..+|+.+ +-|+|.-.+++
T Consensus 122 ~~~~~~~~fD~v~~~~~l~~~~~~---~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 122 DLPFEDASFDAVWALESLHHMPDR---GRALREMARVLRPGGTVAI 164 (273)
T ss_dssp SCCSCTTCEEEEEEESCTTTSSCH---HHHHHHHHTTEEEEEEEEE
T ss_pred cCCCCCCCccEEEEechhhhCCCH---HHHHHHHHHHcCCCeEEEE
Confidence 122333333333344557888653 4666655 56899865444
No 69
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=75.76 E-value=11 Score=34.65 Aligned_cols=101 Identities=12% Similarity=0.130 Sum_probs=59.2
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-.|+|+|.|.|. +...|+.+ + ..++|||+.+...++.+.+++...- + ...+|.. .+ ...+.
T Consensus 80 ~~~vLDiGcG~G~----~~~~l~~~---~---~~~v~~vD~s~~~~~~a~~~~~~~~---~-~~~~~~~--~d--~~~~~ 141 (241)
T 2ex4_A 80 TSCALDCGAGIGR----ITKRLLLP---L---FREVDMVDITEDFLVQAKTYLGEEG---K-RVRNYFC--CG--LQDFT 141 (241)
T ss_dssp CSEEEEETCTTTH----HHHHTTTT---T---CSEEEEEESCHHHHHHHHHHTGGGG---G-GEEEEEE--CC--GGGCC
T ss_pred CCEEEEECCCCCH----HHHHHHHh---c---CCEEEEEeCCHHHHHHHHHHhhhcC---C-ceEEEEE--cC--hhhcC
Confidence 5689999999984 44556665 2 2489999998887777766553321 1 2344432 22 22222
Q ss_pred CCCC--cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 284 KKKH--ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 284 ~~~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
..++ ++|+.+ ..|||+.+. ....+|+.+ +.|+|.-.+++
T Consensus 142 ~~~~~fD~v~~~--~~l~~~~~~-~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 142 PEPDSYDVIWIQ--WVIGHLTDQ-HLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp CCSSCEEEEEEE--SCGGGSCHH-HHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCEEEEEEc--chhhhCCHH-HHHHHHHHHHHhcCCCeEEEE
Confidence 3333 344444 457888753 334566555 66899766555
No 70
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=75.12 E-value=16 Score=36.46 Aligned_cols=134 Identities=10% Similarity=0.073 Sum_probs=74.8
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-ee-cc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RL-VN 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l-~~ 281 (479)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+...++.+.+++...+..+.+-..+|. ..+. +. ..
T Consensus 121 ~~~VLdIG~G~G~----~a~~la~~-----~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~--~~D~~~~l~~ 189 (334)
T 1xj5_A 121 PKKVLVIGGGDGG----VLREVARH-----ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV--IGDGVAFLKN 189 (334)
T ss_dssp CCEEEEETCSSSH----HHHHHTTC-----TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE--ESCHHHHHHT
T ss_pred CCEEEEECCCccH----HHHHHHHc-----CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE--ECCHHHHHHh
Confidence 4689999999984 45556655 24579999999998888888877766433311124442 2222 11 11
Q ss_pred ccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEeecCCCCCCchhHHHHHHHHHHHHHhh
Q 041748 282 IRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFD 352 (479)
Q Consensus 282 L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ea~~ns~~F~~RF~eaL~yYsalFD 352 (479)
+.-..=++|++|+....+...+ .....+++.+ +.|+|.-++++.-+.....+.. +.+.+.-...+|.
T Consensus 190 ~~~~~fDlIi~d~~~p~~~~~~-l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~---~~~~~~~l~~~F~ 257 (334)
T 1xj5_A 190 AAEGSYDAVIVDSSDPIGPAKE-LFEKPFFQSVARALRPGGVVCTQAESLWLHMDI---IEDIVSNCREIFK 257 (334)
T ss_dssp SCTTCEEEEEECCCCTTSGGGG-GGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHH---HHHHHHHHHHHCS
T ss_pred ccCCCccEEEECCCCccCcchh-hhHHHHHHHHHHhcCCCcEEEEecCCccccHHH---HHHHHHHHHHhCc
Confidence 1111225777776533332211 1124566555 6799998888864443333222 3334444445555
No 71
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=74.96 E-value=9.8 Score=34.40 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=59.6
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+.-.|+|+|.|.|. +...|+.+ ++ ++|||+.+...++.+.+++ +++.| . ..+. ..+
T Consensus 40 ~~~~vLdiG~G~G~----~~~~l~~~----~~---~v~~~D~s~~~~~~a~~~~-------~~~~~--~--~~d~--~~~ 95 (239)
T 3bxo_A 40 EASSLLDVACGTGT----HLEHFTKE----FG---DTAGLELSEDMLTHARKRL-------PDATL--H--QGDM--RDF 95 (239)
T ss_dssp TCCEEEEETCTTSH----HHHHHHHH----HS---EEEEEESCHHHHHHHHHHC-------TTCEE--E--ECCT--TTC
T ss_pred CCCeEEEecccCCH----HHHHHHHh----CC---cEEEEeCCHHHHHHHHHhC-------CCCEE--E--ECCH--HHc
Confidence 35689999999994 34556655 12 8999999887776665542 23433 2 2211 112
Q ss_pred cCCCCcE-EEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RKKKHET-VAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~~~~Ea-LaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.. ++.. +|+++...+||+.+......+|+.+ +.|+|.-.++++
T Consensus 96 ~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 96 RL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp CC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 22 2222 4443333678886654556677666 578999887775
No 72
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=74.52 E-value=51 Score=30.02 Aligned_cols=101 Identities=13% Similarity=0.082 Sum_probs=59.8
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+.-+|+|+|.|.|. +...|+.+ + + ++|||+.+...++.+.+++.+. .+.| .+|. ..+. ..+
T Consensus 21 ~~~~vLDiGcG~G~----~~~~l~~~---~-~---~v~~vD~s~~~~~~a~~~~~~~--~~~~--v~~~--~~d~--~~~ 81 (239)
T 1xxl_A 21 AEHRVLDIGAGAGH----TALAFSPY---V-Q---ECIGVDATKEMVEVASSFAQEK--GVEN--VRFQ--QGTA--ESL 81 (239)
T ss_dssp TTCEEEEESCTTSH----HHHHHGGG---S-S---EEEEEESCHHHHHHHHHHHHHH--TCCS--EEEE--ECBT--TBC
T ss_pred CCCEEEEEccCcCH----HHHHHHHh---C-C---EEEEEECCHHHHHHHHHHHHHc--CCCC--eEEE--eccc--ccC
Confidence 45789999999984 44566665 2 2 8999999888787776665432 1222 3343 2222 223
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
...++..=+|-|...+||+.+. ..+|+.+ +-|+|.-.+++
T Consensus 82 ~~~~~~fD~v~~~~~l~~~~~~---~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 82 PFPDDSFDIITCRYAAHHFSDV---RKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp CSCTTCEEEEEEESCGGGCSCH---HHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCcEEEEEECCchhhccCH---HHHHHHHHHHcCCCcEEEE
Confidence 3333433333444567888653 3555544 67899866555
No 73
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=73.98 E-value=18 Score=33.98 Aligned_cols=107 Identities=14% Similarity=0.195 Sum_probs=60.2
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV 267 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp 267 (479)
+.+++.+.-. +.-.|+|+|.|.|.- ...|+.. + .++|||+.+...++.+.+++ +++.
T Consensus 47 ~~l~~~l~~~-----~~~~vLDiGcG~G~~----~~~l~~~---~----~~v~gvD~s~~~~~~a~~~~-------~~~~ 103 (279)
T 3ccf_A 47 EDLLQLLNPQ-----PGEFILDLGCGTGQL----TEKIAQS---G----AEVLGTDNAATMIEKARQNY-------PHLH 103 (279)
T ss_dssp CHHHHHHCCC-----TTCEEEEETCTTSHH----HHHHHHT---T----CEEEEEESCHHHHHHHHHHC-------TTSC
T ss_pred HHHHHHhCCC-----CCCEEEEecCCCCHH----HHHHHhC---C----CeEEEEECCHHHHHHHHhhC-------CCCE
Confidence 3455666432 346899999999943 3334432 2 48999999887777665543 3354
Q ss_pred EEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 268 FEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 268 FeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
|.-. +. ..+.. ++..=+|-+...|||+.+. ..+|+.+ +.|+|.-.+++..
T Consensus 104 ~~~~----d~--~~~~~-~~~fD~v~~~~~l~~~~d~---~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 104 FDVA----DA--RNFRV-DKPLDAVFSNAMLHWVKEP---EAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp EEEC----CT--TTCCC-SSCEEEEEEESCGGGCSCH---HHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEC----Ch--hhCCc-CCCcCEEEEcchhhhCcCH---HHHHHHHHHhcCCCcEEEEEe
Confidence 4321 11 11222 2323233344457888653 3555544 6789987666653
No 74
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=73.08 E-value=39 Score=29.65 Aligned_cols=103 Identities=14% Similarity=0.142 Sum_probs=57.7
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-+|+|+|.|.|.-...+ ++.. + .++|||+.+...++.+.+++.+. + ...+|. ..+. ..+.
T Consensus 24 ~~~vLDiGcG~G~~~~~~---~~~~---~----~~v~~vD~s~~~~~~a~~~~~~~----~-~~~~~~--~~d~--~~~~ 84 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSI---FVED---G----YKTYGIEISDLQLKKAENFSREN----N-FKLNIS--KGDI--RKLP 84 (209)
T ss_dssp CSEEEEESCCSSSCTHHH---HHHT---T----CEEEEEECCHHHHHHHHHHHHHH----T-CCCCEE--ECCT--TSCC
T ss_pred CCEEEEECCCCCHHHHHH---HHhC---C----CEEEEEECCHHHHHHHHHHHHhc----C-CceEEE--ECch--hhCC
Confidence 468999999888533333 3322 2 38999999988887777665442 2 223332 2221 1222
Q ss_pred CCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 284 KKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 284 ~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
..++..=+|-+...+||+.. .....+|+.+ +.|+|.-++++.
T Consensus 85 ~~~~~fD~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 85 FKDESMSFVYSYGTIFHMRK-NDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp SCTTCEEEEEECSCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCceeEEEEcChHHhCCH-HHHHHHHHHHHHHcCCCcEEEEE
Confidence 33332222223345788852 2345566554 678998766654
No 75
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=72.64 E-value=7.2 Score=37.24 Aligned_cols=117 Identities=13% Similarity=0.079 Sum_probs=65.3
Q ss_pred HHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe
Q 041748 187 NQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL 266 (479)
Q Consensus 187 NqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv 266 (479)
-..+++.+... .. .|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++....-.+. -
T Consensus 72 ~~~~~~~~~~~-----~~-~vLDlGcG~G~----~~~~l~~~---~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~-~ 133 (299)
T 3g2m_A 72 AREFATRTGPV-----SG-PVLELAAGMGR----LTFPFLDL---G----WEVTALELSTSVLAAFRKRLAEAPADVR-D 133 (299)
T ss_dssp HHHHHHHHCCC-----CS-CEEEETCTTTT----THHHHHTT---T----CCEEEEESCHHHHHHHHHHHHTSCHHHH-T
T ss_pred HHHHHHhhCCC-----CC-cEEEEeccCCH----HHHHHHHc---C----CeEEEEECCHHHHHHHHHHHhhcccccc-c
Confidence 34455555432 23 89999999996 45556655 2 4799999998888887776654321110 1
Q ss_pred eEEEEEeeccceeccccCCCCcE-EEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 267 VFEFQGLIRGSRLVNIRKKKHET-VAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 267 pFeF~~v~~~~~l~~L~~~~~Ea-LaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
..+|. ..+. ..+.. ++.. +||.+...+|++.. .....+|+.+ +.|+|.-.+++..
T Consensus 134 ~v~~~--~~d~--~~~~~-~~~fD~v~~~~~~~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 134 RCTLV--QGDM--SAFAL-DKRFGTVVISSGSINELDE-ADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp TEEEE--ECBT--TBCCC-SCCEEEEEECHHHHTTSCH-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEE--eCch--hcCCc-CCCcCEEEECCcccccCCH-HHHHHHHHHHHHHcCCCcEEEEEe
Confidence 23332 2222 12222 2322 33333334566543 2455666655 5789987776653
No 76
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=71.89 E-value=30 Score=31.60 Aligned_cols=122 Identities=11% Similarity=0.080 Sum_probs=67.4
Q ss_pred CCCccchhhhhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHH
Q 041748 176 SPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENR 255 (479)
Q Consensus 176 sP~~kfah~tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~r 255 (479)
.++.+-.+-..-..|++.+.- .+.-+|+|+|.|.|. +...|+.+ . + .++|||+.+...++.+.++
T Consensus 14 ~~~~~~~~~~~~~~l~~~~~~-----~~~~~VLDiGcG~G~----~~~~la~~--~-~---~~v~gvD~s~~~l~~a~~~ 78 (256)
T 1nkv_A 14 HRIHNPFTEEKYATLGRVLRM-----KPGTRILDLGSGSGE----MLCTWARD--H-G---ITGTGIDMSSLFTAQAKRR 78 (256)
T ss_dssp CSSSSSCCHHHHHHHHHHTCC-----CTTCEEEEETCTTCH----HHHHHHHH--T-C---CEEEEEESCHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHhcCC-----CCCCEEEEECCCCCH----HHHHHHHh--c-C---CeEEEEeCCHHHHHHHHHH
Confidence 333333333334455555532 134689999999995 34456655 2 1 3689999998888777665
Q ss_pred HHHHHhhcCCee--EEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 256 LVSFSKSFRNLV--FEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 256 L~~fA~~lgnvp--FeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
+.+ .| ++ .+|.. .+. ..+.. ++..=+|-|...+||+.+ ...+|+.+ +-|+|.-.+++
T Consensus 79 ~~~----~~-~~~~v~~~~--~d~--~~~~~-~~~fD~V~~~~~~~~~~~---~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 79 AEE----LG-VSERVHFIH--NDA--AGYVA-NEKCDVAACVGATWIAGG---FAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp HHH----TT-CTTTEEEEE--SCC--TTCCC-SSCEEEEEEESCGGGTSS---SHHHHHHHTTSEEEEEEEEE
T ss_pred HHh----cC-CCcceEEEE--CCh--HhCCc-CCCCCEEEECCChHhcCC---HHHHHHHHHHHcCCCeEEEE
Confidence 543 33 32 44532 222 11212 332323334455788764 34556555 56899865554
No 77
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=70.71 E-value=18 Score=33.77 Aligned_cols=105 Identities=10% Similarity=0.096 Sum_probs=58.7
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+.-+|+|+|.|.|.- ...|+.+ + ..++|||+.+...++.+.+++. ..+ ++-..+.+..+. ..+
T Consensus 64 ~~~~vLDiGcG~G~~----~~~l~~~--~----~~~v~gvD~s~~~~~~a~~~~~----~~~-~~~~v~~~~~d~--~~~ 126 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGD----LLKYERA--G----IGEYYGVDIAEVSINDARVRAR----NMK-RRFKVFFRAQDS--YGR 126 (298)
T ss_dssp TTCEEEEETCTTTTT----HHHHHHH--T----CSEEEEEESCHHHHHHHHHHHH----TSC-CSSEEEEEESCT--TTS
T ss_pred CCCeEEEECCCCCHH----HHHHHHC--C----CCEEEEEECCHHHHHHHHHHHH----hcC-CCccEEEEECCc--ccc
Confidence 356899999999942 2335554 1 2489999999888877776654 233 322222223222 112
Q ss_pred cC-CCC--cEEEEeecccccccc-chhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RK-KKH--ETVAANLVFHLNTLK-IYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~-~~~--EaLaVN~~~~Lh~L~-~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.. .++ ++|+.+ +.|||+. .......+|+.+ +.|+|.-.+++.
T Consensus 127 ~~~~~~~fD~v~~~--~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 127 HMDLGKEFDVISSQ--FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp CCCCSSCEEEEEEE--SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccCCCCCcCEEEEC--chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 22 223 344444 4467742 223445666655 568998766665
No 78
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=70.39 E-value=21 Score=34.18 Aligned_cols=100 Identities=11% Similarity=0.151 Sum_probs=57.9
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccceec
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGSRLV 280 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~~l~ 280 (479)
+.-+|+|+|.|.|. +...|+.+. + .++|||+.+...++.+.+++.+ .| ++ .+|. ..+. .
T Consensus 90 ~~~~vLDiGcG~G~----~~~~la~~~---~---~~v~gvD~s~~~~~~a~~~~~~----~~-~~~~v~~~--~~d~--~ 150 (318)
T 2fk8_A 90 PGMTLLDIGCGWGT----TMRRAVERF---D---VNVIGLTLSKNQHARCEQVLAS----ID-TNRSRQVL--LQGW--E 150 (318)
T ss_dssp TTCEEEEESCTTSH----HHHHHHHHH---C---CEEEEEESCHHHHHHHHHHHHT----SC-CSSCEEEE--ESCG--G
T ss_pred CcCEEEEEcccchH----HHHHHHHHC---C---CEEEEEECCHHHHHHHHHHHHh----cC-CCCceEEE--ECCh--H
Confidence 34689999998883 445566552 2 2899999988877777665542 33 32 3443 2222 1
Q ss_pred cccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 281 NIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 281 ~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
.+. ..=++|+.+. .|||+.+. ....+|+.+ +-|+|.-.+++
T Consensus 151 ~~~-~~fD~v~~~~--~l~~~~~~-~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 151 DFA-EPVDRIVSIE--AFEHFGHE-NYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp GCC-CCCSEEEEES--CGGGTCGG-GHHHHHHHHHHHSCTTCEEEE
T ss_pred HCC-CCcCEEEEeC--hHHhcCHH-HHHHHHHHHHHhcCCCcEEEE
Confidence 121 2223444443 47888642 344566555 66899755444
No 79
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=68.66 E-value=29 Score=31.40 Aligned_cols=116 Identities=11% Similarity=0.035 Sum_probs=64.0
Q ss_pred hHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCC
Q 041748 186 ANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRN 265 (479)
Q Consensus 186 ANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgn 265 (479)
.+..|.+.+.... .+.-.|+|+|.|.|. +...|+.+ ..++|||+.+...++.+.+++...-..
T Consensus 52 ~~~~l~~~~~~~~---~~~~~vLDiGcG~G~----~~~~l~~~-------~~~v~gvD~s~~~~~~a~~~~~~~~~~--- 114 (235)
T 3lcc_A 52 ATPLIVHLVDTSS---LPLGRALVPGCGGGH----DVVAMASP-------ERFVVGLDISESALAKANETYGSSPKA--- 114 (235)
T ss_dssp CCHHHHHHHHTTC---SCCEEEEEETCTTCH----HHHHHCBT-------TEEEEEECSCHHHHHHHHHHHTTSGGG---
T ss_pred CCHHHHHHHHhcC---CCCCCEEEeCCCCCH----HHHHHHhC-------CCeEEEEECCHHHHHHHHHHhhccCCC---
Confidence 3455555554221 133599999999983 33345543 368999999988888777665432111
Q ss_pred eeEEEEEeeccceeccccCC-CCcEEEEeeccccccccchhhhHHHHHHhH-ccCCcEEEEE
Q 041748 266 LVFEFQGLIRGSRLVNIRKK-KHETVAANLVFHLNTLKIYLKISDTLNLVR-SIKPTIVTLV 325 (479)
Q Consensus 266 vpFeF~~v~~~~~l~~L~~~-~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir-~L~P~Vvtlv 325 (479)
-..+|. ..+. ..+... .=+.|+ +...|||+.++ ....+|+.++ .|+|.-.+++
T Consensus 115 ~~v~~~--~~d~--~~~~~~~~fD~v~--~~~~l~~~~~~-~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 115 EYFSFV--KEDV--FTWRPTELFDLIF--DYVFFCAIEPE-MRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp GGEEEE--CCCT--TTCCCSSCEEEEE--EESSTTTSCGG-GHHHHHHHHHHHEEEEEEEEE
T ss_pred cceEEE--ECch--hcCCCCCCeeEEE--EChhhhcCCHH-HHHHHHHHHHHHCCCCcEEEE
Confidence 123443 2221 111111 113333 33457888643 4456666664 5999877665
No 80
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=67.87 E-value=20 Score=33.65 Aligned_cols=101 Identities=12% Similarity=0.091 Sum_probs=60.0
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccceec
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGSRLV 280 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~~l~ 280 (479)
+.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++.. .| ++ .+|. ..+. .
T Consensus 68 ~~~~vLDiGcG~G~----~~~~l~~~---~----~~v~gvD~s~~~~~~a~~~~~~----~~-~~~~v~~~--~~d~--~ 127 (285)
T 4htf_A 68 QKLRVLDAGGGEGQ----TAIKMAER---G----HQVILCDLSAQMIDRAKQAAEA----KG-VSDNMQFI--HCAA--Q 127 (285)
T ss_dssp SCCEEEEETCTTCH----HHHHHHHT---T----CEEEEEESCHHHHHHHHHHHHC-----C-CGGGEEEE--ESCG--G
T ss_pred CCCEEEEeCCcchH----HHHHHHHC---C----CEEEEEECCHHHHHHHHHHHHh----cC-CCcceEEE--EcCH--H
Confidence 35789999999993 45556665 1 3799999998877777666543 33 32 3443 2222 1
Q ss_pred ccc-CCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 281 NIR-KKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 281 ~L~-~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.+. ..++..=+|-|...|||+.+. ..+|+.+ +-|+|.-++++.
T Consensus 128 ~~~~~~~~~fD~v~~~~~l~~~~~~---~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 128 DVASHLETPVDLILFHAVLEWVADP---RSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp GTGGGCSSCEEEEEEESCGGGCSCH---HHHHHHHHHTEEEEEEEEEE
T ss_pred HhhhhcCCCceEEEECchhhcccCH---HHHHHHHHHHcCCCeEEEEE
Confidence 111 223333233344557888653 3555554 679998776665
No 81
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=67.56 E-value=8.8 Score=37.81 Aligned_cols=97 Identities=14% Similarity=0.140 Sum_probs=55.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-+|+|+|.|.| .+...|+.+. |.+++|+++. ...++ .|+..++| +|.. .+.. ..+
T Consensus 189 ~~~vlDvG~G~G----~~~~~l~~~~-----p~~~~~~~D~-~~~~~--------~a~~~~~v--~~~~--~d~~-~~~- 244 (352)
T 1fp2_A 189 LESIVDVGGGTG----TTAKIICETF-----PKLKCIVFDR-PQVVE--------NLSGSNNL--TYVG--GDMF-TSI- 244 (352)
T ss_dssp CSEEEEETCTTS----HHHHHHHHHC-----TTCEEEEEEC-HHHHT--------TCCCBTTE--EEEE--CCTT-TCC-
T ss_pred CceEEEeCCCcc----HHHHHHHHHC-----CCCeEEEeeC-HHHHh--------hcccCCCc--EEEe--cccc-CCC-
Confidence 469999999999 3566677661 3578999987 44332 34444433 3332 2110 011
Q ss_pred CCCCcEEEEeeccccccccchhhhHHHHHHh-HccCC----cEEEEEeec
Q 041748 284 KKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKP----TIVTLVEQE 328 (479)
Q Consensus 284 ~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P----~VvtlvE~e 328 (479)
..-++++.+. .|||+.+.. ...+|+.+ +.|+| -.++++|..
T Consensus 245 -p~~D~v~~~~--~lh~~~d~~-~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 245 -PNADAVLLKY--ILHNWTDKD-CLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp -CCCSEEEEES--CGGGSCHHH-HHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred -CCccEEEeeh--hhccCCHHH-HHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 1234555444 478887653 33566655 56898 455666644
No 82
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=67.44 E-value=8.9 Score=37.85 Aligned_cols=116 Identities=13% Similarity=0.107 Sum_probs=68.2
Q ss_pred hHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCC
Q 041748 186 ANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRN 265 (479)
Q Consensus 186 ANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgn 265 (479)
..+.|++.+... ..-+|+|+|.|.|. +...|+.+ + |..++|+|+.+...++.+.+++.. .+
T Consensus 184 ~~~~ll~~l~~~-----~~~~VLDlGcG~G~----~~~~la~~----~-~~~~v~~vD~s~~~l~~a~~~~~~----~~- 244 (343)
T 2pjd_A 184 GSQLLLSTLTPH-----TKGKVLDVGCGAGV----LSVAFARH----S-PKIRLTLCDVSAPAVEASRATLAA----NG- 244 (343)
T ss_dssp HHHHHHHHSCTT-----CCSBCCBTTCTTSH----HHHHHHHH----C-TTCBCEEEESBHHHHHHHHHHHHH----TT-
T ss_pred HHHHHHHhcCcC-----CCCeEEEecCccCH----HHHHHHHH----C-CCCEEEEEECCHHHHHHHHHHHHH----hC-
Confidence 467788887432 23379999999994 34455555 1 346899999988888777766543 34
Q ss_pred eeEEEEEeeccceeccccCCCCcEEEEeecccccccc--chhhhHHHHHHh-HccCCcEEEEEe
Q 041748 266 LVFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLK--IYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 266 vpFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~--~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
+..+| +..+. .......=+.|+.|..| |+.. .......+|+.+ +.|+|.-.+++.
T Consensus 245 ~~~~~--~~~d~--~~~~~~~fD~Iv~~~~~--~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 245 VEGEV--FASNV--FSEVKGRFDMIISNPPF--HDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp CCCEE--EECST--TTTCCSCEEEEEECCCC--CSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCEE--EEccc--cccccCCeeEEEECCCc--ccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 55555 22222 11111122566777664 4321 122345566655 678998776664
No 83
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=66.43 E-value=26 Score=34.01 Aligned_cols=112 Identities=11% Similarity=0.025 Sum_probs=62.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eec-c
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLV-N 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~-~ 281 (479)
.-.|+|+|.|.|. +...|+.. +|..+||+|+.+...++.+.+++...+..+.+-..+|. ..+. +.. .
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~-----~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~--~~D~~~~~~~ 164 (304)
T 3bwc_A 96 PERVLIIGGGDGG----VLREVLRH-----GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVR--VGDGLAFVRQ 164 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHHTC-----TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHHHHHHS
T ss_pred CCeEEEEcCCCCH----HHHHHHhC-----CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECcHHHHHHh
Confidence 4689999999884 45556654 23569999999988888888877665544321124442 2222 110 0
Q ss_pred ccCCCCcEEEEeeccccccccchh-hhHHHHHHh-HccCCcEEEEEeec
Q 041748 282 IRKKKHETVAANLVFHLNTLKIYL-KISDTLNLV-RSIKPTIVTLVEQE 328 (479)
Q Consensus 282 L~~~~~EaLaVN~~~~Lh~L~~~~-~~~~~L~~I-r~L~P~VvtlvE~e 328 (479)
..-..=++|++|+.. +...... -...+++.+ +.|+|.-++++..+
T Consensus 165 ~~~~~fDvIi~d~~~--~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 165 TPDNTYDVVIIDTTD--PAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp SCTTCEEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCceeEEEECCCC--ccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 011122577777654 2211110 014566655 67999887777543
No 84
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=66.31 E-value=15 Score=36.33 Aligned_cols=136 Identities=10% Similarity=0.084 Sum_probs=72.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVNI 282 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~L 282 (479)
.-+|+|+|.|.|. +...++.+ +|..+||+|+.+.+.++.+.+++..++..+.+-.++|. ..+. +....
T Consensus 117 ~~~VLdiG~G~G~----~~~~l~~~-----~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~--~~D~~~~l~~ 185 (321)
T 2pt6_A 117 PKNVLVVGGGDGG----IIRELCKY-----KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF--IEDASKFLEN 185 (321)
T ss_dssp CCEEEEEECTTCH----HHHHHTTC-----TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE--ESCHHHHHHH
T ss_pred CCEEEEEcCCccH----HHHHHHHc-----CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE--EccHHHHHhh
Confidence 4689999999994 45556654 23579999999988888777766543222210123332 2222 11000
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEeecCCCCCCchhHHHHHHHHHHHHHhhhh
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSL 354 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ea~~ns~~F~~RF~eaL~yYsalFDSL 354 (479)
.-..=++|++|.....+.. ...-...+++.+ +.|+|.-+++++..+.... ...+.+.+......|...
T Consensus 186 ~~~~fDvIi~d~~~p~~~~-~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---~~~~~~~~~~l~~~F~~v 254 (321)
T 2pt6_A 186 VTNTYDVIIVDSSDPIGPA-ETLFNQNFYEKIYNALKPNGYCVAQCESLWIH---VGTIKNMIGYAKKLFKKV 254 (321)
T ss_dssp CCSCEEEEEEECCCSSSGG-GGGSSHHHHHHHHHHEEEEEEEEEEECCTTTC---HHHHHHHHHHHHTTCSEE
T ss_pred cCCCceEEEECCcCCCCcc-hhhhHHHHHHHHHHhcCCCcEEEEEcCCcccC---HHHHHHHHHHHHHHCCCe
Confidence 0112257777764322111 100114666665 5789999988875433222 233444444444455544
No 85
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=65.67 E-value=23 Score=34.63 Aligned_cols=137 Identities=8% Similarity=0.075 Sum_probs=74.0
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVNI 282 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~L 282 (479)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+...++.+.+++...+..+.+-.+++. ..+. +....
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~-----~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~--~~Da~~~l~~ 164 (304)
T 2o07_A 96 PRKVLIIGGGDGG----VLREVVKH-----PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH--VGDGFEFMKQ 164 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHTTC-----TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHHHHHHT
T ss_pred CCEEEEECCCchH----HHHHHHHc-----CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECcHHHHHhh
Confidence 4589999999883 45556655 23579999999988888888877665443310123333 2222 11001
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEeecCCCCCCchhHHHHHHHHHHHHHhhhhh
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSLD 355 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ea~~ns~~F~~RF~eaL~yYsalFDSLd 355 (479)
.-..=+.|++++....... .......+++.+ +.|+|.-++++...+....+ +.+.....+...+|....
T Consensus 165 ~~~~fD~Ii~d~~~~~~~~-~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~---~~~~~~~~~l~~~f~~v~ 234 (304)
T 2o07_A 165 NQDAFDVIITDSSDPMGPA-ESLFKESYYQLMKTALKEDGVLCCQGECQWLHL---DLIKEMRQFCQSLFPVVA 234 (304)
T ss_dssp CSSCEEEEEEECC------------CHHHHHHHHHEEEEEEEEEEEECTTTCH---HHHHHHHHHHHHHCSEEE
T ss_pred CCCCceEEEECCCCCCCcc-hhhhHHHHHHHHHhccCCCeEEEEecCCcccch---HHHHHHHHHHHHhCCCce
Confidence 1122257777765322110 001123566655 67899999888765433332 233344445566666443
No 86
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=64.97 E-value=14 Score=35.70 Aligned_cols=102 Identities=13% Similarity=0.077 Sum_probs=56.2
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+.-+|+|+|.|.|. +-..|+.+ + -++|||+.+...++.+.+++... . +...+..+.... ...+
T Consensus 45 ~g~~VLDlGcGtG~----~a~~La~~---g----~~V~gvD~S~~ml~~Ar~~~~~~----~-v~~~~~~~~~~~-~~~~ 107 (261)
T 3iv6_A 45 PGSTVAVIGASTRF----LIEKALER---G----ASVTVFDFSQRMCDDLAEALADR----C-VTIDLLDITAEI-PKEL 107 (261)
T ss_dssp TTCEEEEECTTCHH----HHHHHHHT---T----CEEEEEESCHHHHHHHHHHTSSS----C-CEEEECCTTSCC-CGGG
T ss_pred CcCEEEEEeCcchH----HHHHHHhc---C----CEEEEEECCHHHHHHHHHHHHhc----c-ceeeeeeccccc-cccc
Confidence 35689999999985 44556665 2 27999999988787766654322 2 444443221100 0011
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
. .+=++|+.|.+ +||+..+. ...+|..+ +-| |.-.+++-
T Consensus 108 ~-~~fD~Vv~~~~--l~~~~~~~-~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 108 A-GHFDFVLNDRL--INRFTTEE-ARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp T-TCCSEEEEESC--GGGSCHHH-HHHHHHHHHHHH-TTSEEEEE
T ss_pred C-CCccEEEEhhh--hHhCCHHH-HHHHHHHHHHhC-cCcEEEEE
Confidence 1 12245555544 77876442 33444444 456 77655443
No 87
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=64.85 E-value=29 Score=31.68 Aligned_cols=101 Identities=14% Similarity=0.125 Sum_probs=58.0
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+.-+|+|+|.|.|.- ...|+.+ + .++|||+.+...++.+.+++ ....+ ..+|.. .+. ..+
T Consensus 39 ~~~~vLDiG~G~G~~----~~~l~~~---~----~~v~~vD~s~~~~~~a~~~~---~~~~~--~~~~~~--~d~--~~~ 98 (263)
T 2yqz_A 39 EEPVFLELGVGTGRI----ALPLIAR---G----YRYIALDADAAMLEVFRQKI---AGVDR--KVQVVQ--ADA--RAI 98 (263)
T ss_dssp SCCEEEEETCTTSTT----HHHHHTT---T----CEEEEEESCHHHHHHHHHHT---TTSCT--TEEEEE--SCT--TSC
T ss_pred CCCEEEEeCCcCCHH----HHHHHHC---C----CEEEEEECCHHHHHHHHHHh---hccCC--ceEEEE--ccc--ccC
Confidence 456899999999842 3345554 2 37999999988887777665 22222 344432 222 122
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
...++..=+|-+...+||+.+ ...+|+.+ +-|+|.-.+++.
T Consensus 99 ~~~~~~fD~v~~~~~l~~~~~---~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 99 PLPDESVHGVIVVHLWHLVPD---WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CSCTTCEEEEEEESCGGGCTT---HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCeeEEEECCchhhcCC---HHHHHHHHHHHCCCCcEEEEE
Confidence 233332323334445788864 23555554 668997666554
No 88
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=64.68 E-value=16 Score=36.70 Aligned_cols=134 Identities=13% Similarity=0.088 Sum_probs=72.4
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccceec
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGSRLV 280 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~~l~ 280 (479)
+.-.|+|+|.|.| .+...|+.+ | . -++|||+.+ ..++.+.+++ +..+ ++ .+|. ..+..-.
T Consensus 63 ~~~~VLDlGcGtG----~ls~~la~~---g-~--~~V~gvD~s-~~~~~a~~~~----~~~~-~~~~v~~~--~~d~~~~ 124 (376)
T 3r0q_C 63 EGKTVLDVGTGSG----ILAIWSAQA---G-A--RKVYAVEAT-KMADHARALV----KANN-LDHIVEVI--EGSVEDI 124 (376)
T ss_dssp TTCEEEEESCTTT----HHHHHHHHT---T-C--SEEEEEESS-TTHHHHHHHH----HHTT-CTTTEEEE--ESCGGGC
T ss_pred CCCEEEEeccCcC----HHHHHHHhc---C-C--CEEEEEccH-HHHHHHHHHH----HHcC-CCCeEEEE--ECchhhc
Confidence 3468999999999 334445554 2 1 389999988 6665554443 3333 43 4443 3322111
Q ss_pred cccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEeecCCC----CCCchhH---HHHHHHHHHHHHhh
Q 041748 281 NIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQEGSR----SPRNFLS---RFMESLHYFAAMFD 352 (479)
Q Consensus 281 ~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ea~~----ns~~F~~---RF~eaL~yYsalFD 352 (479)
.+. ..=+.|+.|.+ .|.+..+.....+|..+ +-|+|.-+++.....-+ ..+.+.. .|.+.+..+..+++
T Consensus 125 ~~~-~~~D~Iv~~~~--~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~fw~ 201 (376)
T 3r0q_C 125 SLP-EKVDVIISEWM--GYFLLRESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIADRKRNDFDGAMADWHNFSD 201 (376)
T ss_dssp CCS-SCEEEEEECCC--BTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcC-CcceEEEEcCh--hhcccchHHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchHHhhhhhhhhhhhhhhhhhhh
Confidence 121 22245555543 34454445567788887 88999988776543222 1222221 24455555555655
Q ss_pred hhhhc
Q 041748 353 SLDDC 357 (479)
Q Consensus 353 SLda~ 357 (479)
..+..
T Consensus 202 ~~~~~ 206 (376)
T 3r0q_C 202 EIKSY 206 (376)
T ss_dssp HHHHS
T ss_pred ccCcc
Confidence 44443
No 89
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=64.55 E-value=33 Score=29.22 Aligned_cols=94 Identities=12% Similarity=0.163 Sum_probs=56.0
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+.-.|+|+|.|.|. +...|+.+ + . ++|||+.+...++.+.++ .+++.| . ..+ +
T Consensus 17 ~~~~vLDiG~G~G~----~~~~l~~~---~---~-~v~~vD~s~~~~~~a~~~-------~~~v~~--~--~~d-----~ 69 (170)
T 3i9f_A 17 KKGVIVDYGCGNGF----YCKYLLEF---A---T-KLYCIDINVIALKEVKEK-------FDSVIT--L--SDP-----K 69 (170)
T ss_dssp CCEEEEEETCTTCT----THHHHHTT---E---E-EEEEECSCHHHHHHHHHH-------CTTSEE--E--SSG-----G
T ss_pred CCCeEEEECCCCCH----HHHHHHhh---c---C-eEEEEeCCHHHHHHHHHh-------CCCcEE--E--eCC-----C
Confidence 46789999999984 45566665 2 3 899999988777776665 333333 2 121 2
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
...++..=+|-+...+||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 70 ~~~~~~~D~v~~~~~l~~~~~---~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 70 EIPDNSVDFILFANSFHDMDD---KQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp GSCTTCEEEEEEESCSTTCSC---HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCceEEEEEccchhcccC---HHHHHHHHHHhcCCCCEEEEE
Confidence 222332222334445788854 34555544 678997665554
No 90
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=63.52 E-value=6.9 Score=39.43 Aligned_cols=100 Identities=14% Similarity=0.199 Sum_probs=57.9
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+.-.|+|+|.|.|. ++..|+.+ + .++|||+.+...++.+. ..+ ++..-..+.. .....+
T Consensus 107 ~~~~VLDiGcG~G~----~~~~l~~~---g----~~v~gvD~s~~~~~~a~--------~~~-~~~~~~~~~~-~~~~~l 165 (416)
T 4e2x_A 107 PDPFIVEIGCNDGI----MLRTIQEA---G----VRHLGFEPSSGVAAKAR--------EKG-IRVRTDFFEK-ATADDV 165 (416)
T ss_dssp SSCEEEEETCTTTT----THHHHHHT---T----CEEEEECCCHHHHHHHH--------TTT-CCEECSCCSH-HHHHHH
T ss_pred CCCEEEEecCCCCH----HHHHHHHc---C----CcEEEECCCHHHHHHHH--------HcC-CCcceeeech-hhHhhc
Confidence 35689999999996 56667765 2 28999999877665443 334 5433211111 111112
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
...++..=+|-+...|||+.+ ...+|+.+ +-|+|.-+++.+
T Consensus 166 ~~~~~~fD~I~~~~vl~h~~d---~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 166 RRTEGPANVIYAANTLCHIPY---VQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp HHHHCCEEEEEEESCGGGCTT---HHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCEEEEEECChHHhcCC---HHHHHHHHHHHcCCCeEEEEE
Confidence 222232323334455889864 45666666 568998777765
No 91
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=63.36 E-value=7 Score=35.88 Aligned_cols=101 Identities=15% Similarity=0.106 Sum_probs=56.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eecc-
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVN- 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~- 281 (479)
.-.|+|+|.|.|. +...|+.+ ++ ++|||+.+...++.+.+++ .. .|+ +|.. .+. ++..
T Consensus 57 ~~~vLD~GcG~G~----~~~~la~~----~~---~v~gvD~s~~~~~~a~~~~----~~-~~~--~~~~--~d~~~~~~~ 116 (245)
T 3ggd_A 57 ELPLIDFACGNGT----QTKFLSQF----FP---RVIGLDVSKSALEIAAKEN----TA-ANI--SYRL--LDGLVPEQA 116 (245)
T ss_dssp TSCEEEETCTTSH----HHHHHHHH----SS---CEEEEESCHHHHHHHHHHS----CC-TTE--EEEE--CCTTCHHHH
T ss_pred CCeEEEEcCCCCH----HHHHHHHh----CC---CEEEEECCHHHHHHHHHhC----cc-cCc--eEEE--Ccccccccc
Confidence 4579999999883 45566766 22 7999999888777776654 11 124 3332 221 1100
Q ss_pred ccCC---CCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEE-EEEee
Q 041748 282 IRKK---KHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIV-TLVEQ 327 (479)
Q Consensus 282 L~~~---~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vv-tlvE~ 327 (479)
.... +-++|+.+ ..+||+.+. ....+|+.+ +.|+|.-. ++++.
T Consensus 117 ~~~~~~~~~d~v~~~--~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 117 AQIHSEIGDANIYMR--TGFHHIPVE-KRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHHHHHHCSCEEEEE--SSSTTSCGG-GHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cccccccCccEEEEc--chhhcCCHH-HHHHHHHHHHHHcCCCCEEEEEeC
Confidence 0011 12344444 447788643 344566555 56899754 56654
No 92
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=63.31 E-value=19 Score=35.43 Aligned_cols=97 Identities=15% Similarity=0.134 Sum_probs=55.8
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-+|+|+|.|.| .+...|+.+. |.+++|+++. ...+ +.|+.+.+ .+|.. .+..- .+
T Consensus 194 ~~~vlDvG~G~G----~~~~~l~~~~-----p~~~~~~~D~-~~~~--------~~a~~~~~--v~~~~--~d~~~-~~- 249 (358)
T 1zg3_A 194 LESLVDVGGGTG----GVTKLIHEIF-----PHLKCTVFDQ-PQVV--------GNLTGNEN--LNFVG--GDMFK-SI- 249 (358)
T ss_dssp CSEEEEETCTTS----HHHHHHHHHC-----TTSEEEEEEC-HHHH--------SSCCCCSS--EEEEE--CCTTT-CC-
T ss_pred CCEEEEECCCcC----HHHHHHHHHC-----CCCeEEEecc-HHHH--------hhcccCCC--cEEEe--CccCC-CC-
Confidence 468999999999 3566677661 3578999986 3333 23443443 33432 21100 11
Q ss_pred CCCCcEEEEeeccccccccchhhhHHHHHHh-HccCC----cEEEEEeec
Q 041748 284 KKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKP----TIVTLVEQE 328 (479)
Q Consensus 284 ~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P----~VvtlvE~e 328 (479)
..-++++.+.+ ||++.+.. ...+|+.+ +.|+| -.++++|.-
T Consensus 250 -~~~D~v~~~~v--lh~~~d~~-~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 250 -PSADAVLLKWV--LHDWNDEQ-SLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp -CCCSEEEEESC--GGGSCHHH-HHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred -CCceEEEEccc--ccCCCHHH-HHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 12456665554 78887653 34666665 56888 345566643
No 93
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=62.46 E-value=29 Score=33.53 Aligned_cols=135 Identities=12% Similarity=0.010 Sum_probs=73.2
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVNI 282 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~L 282 (479)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+...++.+.+++..++..+++-.+++. ..+. +....
T Consensus 91 ~~~VLdiG~G~G~----~~~~l~~~-----~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~--~~D~~~~l~~ 159 (296)
T 1inl_A 91 PKKVLIIGGGDGG----TLREVLKH-----DSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV--IANGAEYVRK 159 (296)
T ss_dssp CCEEEEEECTTCH----HHHHHTTS-----TTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHHHHGGG
T ss_pred CCEEEEEcCCcCH----HHHHHHhc-----CCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEE--ECcHHHHHhh
Confidence 4689999999983 45556655 23468999999988888888877665544421123332 2222 11000
Q ss_pred cCCCCcEEEEeeccccccccchh--hhHHHHHHh-HccCCcEEEEEeecCCCCCCch-hHHHHHHHHHHHHHhhhhh
Q 041748 283 RKKKHETVAANLVFHLNTLKIYL--KISDTLNLV-RSIKPTIVTLVEQEGSRSPRNF-LSRFMESLHYFAAMFDSLD 355 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~--~~~~~L~~I-r~L~P~VvtlvE~ea~~ns~~F-~~RF~eaL~yYsalFDSLd 355 (479)
.-..=++|++|.... ...... ....+++.+ +.|+|.-++++...+ |.+ ...+.+.+......|....
T Consensus 160 ~~~~fD~Ii~d~~~~--~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~~~~~l~~~F~~v~ 230 (296)
T 1inl_A 160 FKNEFDVIIIDSTDP--TAGQGGHLFTEEFYQACYDALKEDGVFSAETED----PFYDIGWFKLAYRRISKVFPITR 230 (296)
T ss_dssp CSSCEEEEEEEC------------CCSHHHHHHHHHHEEEEEEEEEECCC----TTTTHHHHHHHHHHHHHHCSEEE
T ss_pred CCCCceEEEEcCCCc--ccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC----cccCHHHHHHHHHHHHHHCCceE
Confidence 111225677765422 011111 124566655 679999888876322 222 3455555555566666443
No 94
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=61.98 E-value=9 Score=35.14 Aligned_cols=94 Identities=15% Similarity=0.244 Sum_probs=52.9
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVNI 282 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~L 282 (479)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++ .+| +..+. +.. .
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~---~----~~v~gvD~s~~~~~~a~~~------------~~~--~~~d~~~~~-~ 95 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE---G----IESIGVDINEDMIKFCEGK------------FNV--VKSDAIEYL-K 95 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH---T----CCEEEECSCHHHHHHHHTT------------SEE--ECSCHHHHH-H
T ss_pred CCeEEEEeCCCCH----HHHHHHhC---C----CcEEEEECCHHHHHHHHhh------------cce--eeccHHHHh-h
Confidence 4689999999884 34566665 1 2589999887766555443 222 22221 110 0
Q ss_pred cCCCC--cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RKKKH--ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~~~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
...++ +.|+. ...|||+.+. ....+|+.+ +.|+|.-.+++.
T Consensus 96 ~~~~~~fD~i~~--~~~l~~~~~~-~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 96 SLPDKYLDGVMI--SHFVEHLDPE-RLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp TSCTTCBSEEEE--ESCGGGSCGG-GHHHHHHHHHHHBCTTCCEEEE
T ss_pred hcCCCCeeEEEE--CCchhhCCcH-HHHHHHHHHHHHcCCCcEEEEE
Confidence 12222 34443 3457888743 345666655 679997554443
No 95
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=61.88 E-value=33 Score=33.51 Aligned_cols=101 Identities=10% Similarity=0.050 Sum_probs=54.9
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccceecc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGSRLVN 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~~l~~ 281 (479)
.-+|+|+|.|.|. |...++.+ | .-+++||+.+ ..++.+.+++. ..| ++ .+| +..+. ..
T Consensus 39 ~~~VLDiGcGtG~----ls~~la~~---g---~~~v~~vD~s-~~~~~a~~~~~----~~~-~~~~i~~--~~~d~--~~ 98 (328)
T 1g6q_1 39 DKIVLDVGCGTGI----LSMFAAKH---G---AKHVIGVDMS-SIIEMAKELVE----LNG-FSDKITL--LRGKL--ED 98 (328)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT---C---CSEEEEEESS-THHHHHHHHHH----HTT-CTTTEEE--EESCT--TT
T ss_pred CCEEEEecCccHH----HHHHHHHC---C---CCEEEEEChH-HHHHHHHHHHH----HcC-CCCCEEE--EECch--hh
Confidence 4589999999994 33445554 1 2489999987 44554444432 233 32 333 22222 11
Q ss_pred ccCCCC--cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 282 IRKKKH--ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 282 L~~~~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
+.+.++ ++|+.+.+ .+.+..+.....+|..+ +-|+|.-.++.+
T Consensus 99 ~~~~~~~~D~Ivs~~~--~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 99 VHLPFPKVDIIISEWM--GYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp SCCSSSCEEEEEECCC--BTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccCCCCcccEEEEeCc--hhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 222212 45555544 23344444556677665 679998877643
No 96
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=61.65 E-value=82 Score=27.45 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=55.8
Q ss_pred EEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccccCC
Q 041748 206 HVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIRKK 285 (479)
Q Consensus 206 HIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~~~ 285 (479)
.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++.. .+ +..+|. ..+. ..+...
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~---~----~~v~~vD~s~~~~~~a~~~~~~----~~-~~~~~~--~~d~--~~~~~~ 91 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL---G----YEVTAVDQSSVGLAKAKQLAQE----KG-VKITTV--QSNL--ADFDIV 91 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT---T----CEEEEECSSHHHHHHHHHHHHH----HT-CCEEEE--CCBT--TTBSCC
T ss_pred CEEEECCCCCH----hHHHHHhC---C----CeEEEEECCHHHHHHHHHHHHh----cC-CceEEE--EcCh--hhcCCC
Confidence 99999999884 34556655 2 3899999988877777766543 23 444443 2221 112222
Q ss_pred C--CcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 286 K--HETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 286 ~--~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
+ =+.|+.+ +.|+. ......+|+.+ +.|+|.-.+++..
T Consensus 92 ~~~fD~v~~~----~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 92 ADAWEGIVSI----FCHLP-SSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp TTTCSEEEEE----CCCCC-HHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred cCCccEEEEE----hhcCC-HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 2444443 22342 22345666655 5689987766653
No 97
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=60.72 E-value=49 Score=29.55 Aligned_cols=109 Identities=7% Similarity=0.095 Sum_probs=60.2
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eecc-
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVN- 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~- 281 (479)
.-.|+|+|.|.| .+...|+.+. |..++|||+.+...++.+.+++... .+.|+ +|. ..+. ++..
T Consensus 42 ~~~vLDiGcG~G----~~~~~la~~~-----p~~~v~gvD~s~~~l~~a~~~~~~~--~~~~v--~~~--~~d~~~~~~~ 106 (214)
T 1yzh_A 42 NPIHVEVGSGKG----AFVSGMAKQN-----PDINYIGIDIQKSVLSYALDKVLEV--GVPNI--KLL--WVDGSDLTDY 106 (214)
T ss_dssp CCEEEEESCTTS----HHHHHHHHHC-----TTSEEEEEESCHHHHHHHHHHHHHH--CCSSE--EEE--ECCSSCGGGT
T ss_pred CCeEEEEccCcC----HHHHHHHHHC-----CCCCEEEEEcCHHHHHHHHHHHHHc--CCCCE--EEE--eCCHHHHHhh
Confidence 457999999999 3445566651 2468999999988888777665432 12223 332 2222 1111
Q ss_pred ccCCCCcEEEEeeccccccccch---hhhHHHHHHhH-ccCCcEEEEEee
Q 041748 282 IRKKKHETVAANLVFHLNTLKIY---LKISDTLNLVR-SIKPTIVTLVEQ 327 (479)
Q Consensus 282 L~~~~~EaLaVN~~~~Lh~L~~~---~~~~~~L~~Ir-~L~P~VvtlvE~ 327 (479)
+.-..=+.|++|..........+ .....+|..+. .|+|.-+++++-
T Consensus 107 ~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 107 FEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp SCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred cCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 11112256777754221110010 11246777664 599997777764
No 98
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=59.37 E-value=39 Score=29.57 Aligned_cols=107 Identities=16% Similarity=0.147 Sum_probs=57.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe--eEEEEEeeccc-eec
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL--VFEFQGLIRGS-RLV 280 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv--pFeF~~v~~~~-~l~ 280 (479)
.-.|+|+|.|.| .+...|+.+- +| .-++|||+.+...++.+.+++... | + ..+|. ..+. ++.
T Consensus 23 ~~~vLDlGcG~G----~~~~~l~~~~---~~-~~~v~~vD~s~~~~~~a~~~~~~~----~-~~~~v~~~--~~d~~~~~ 87 (197)
T 3eey_A 23 GDTVVDATCGNG----NDTAFLASLV---GE-NGRVFGFDIQDKAIANTTKKLTDL----N-LIDRVTLI--KDGHQNMD 87 (197)
T ss_dssp TCEEEESCCTTS----HHHHHHHHHH---CT-TCEEEEECSCHHHHHHHHHHHHHT----T-CGGGEEEE--CSCGGGGG
T ss_pred CCEEEEcCCCCC----HHHHHHHHHh---CC-CCEEEEEECCHHHHHHHHHHHHHc----C-CCCCeEEE--ECCHHHHh
Confidence 458999999998 3444555551 11 238999999988888777765443 3 3 34443 3322 121
Q ss_pred cccCCCCcEEEEeeccccc----cccc-hhhhHHHHHH-hHccCCcEEEEEe
Q 041748 281 NIRKKKHETVAANLVFHLN----TLKI-YLKISDTLNL-VRSIKPTIVTLVE 326 (479)
Q Consensus 281 ~L~~~~~EaLaVN~~~~Lh----~L~~-~~~~~~~L~~-Ir~L~P~VvtlvE 326 (479)
...-..=+.++.|..+ +. +... ......+|+. .+.|+|.-.+++.
T Consensus 88 ~~~~~~fD~v~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 88 KYIDCPVKAVMFNLGY-LPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp GTCCSCEEEEEEEESB-CTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhccCCceEEEEcCCc-ccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 1111222567777655 22 1111 1122235544 4668997665543
No 99
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=59.12 E-value=38 Score=29.67 Aligned_cols=45 Identities=9% Similarity=-0.056 Sum_probs=31.7
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLV 257 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~ 257 (479)
+.-.|+|+|.|.|. +...|+.+ ++. ++|||+.+...++.+.+++.
T Consensus 42 ~~~~vLdiGcG~G~----~~~~l~~~----~~~--~v~~~D~s~~~~~~a~~~~~ 86 (215)
T 2pxx_A 42 PEDRILVLGCGNSA----LSYELFLG----GFP--NVTSVDYSSVVVAAMQACYA 86 (215)
T ss_dssp TTCCEEEETCTTCS----HHHHHHHT----TCC--CEEEEESCHHHHHHHHHHTT
T ss_pred CCCeEEEECCCCcH----HHHHHHHc----CCC--cEEEEeCCHHHHHHHHHhcc
Confidence 35689999999884 33455554 222 89999998887777766553
No 100
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=58.51 E-value=79 Score=28.15 Aligned_cols=104 Identities=14% Similarity=0.140 Sum_probs=59.1
Q ss_pred eEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe---eEEEEEeeccc-eec
Q 041748 205 LHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL---VFEFQGLIRGS-RLV 280 (479)
Q Consensus 205 VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv---pFeF~~v~~~~-~l~ 280 (479)
-.|+|+|.|.|.- ...++.+ +. -++|||+.+.+.++.+.+++.. .| + ..+|. ..+. +..
T Consensus 55 ~~vLDlGcGtG~~----~~~~~~~---~~---~~v~gvD~s~~~l~~a~~~~~~----~~-~~~~~v~~~--~~d~~~~~ 117 (201)
T 2ift_A 55 SECLDGFAGSGSL----GFEALSR---QA---KKVTFLELDKTVANQLKKNLQT----LK-CSSEQAEVI--NQSSLDFL 117 (201)
T ss_dssp CEEEETTCTTCHH----HHHHHHT---TC---SEEEEECSCHHHHHHHHHHHHH----TT-CCTTTEEEE--CSCHHHHT
T ss_pred CeEEEcCCccCHH----HHHHHHc---cC---CEEEEEECCHHHHHHHHHHHHH----hC-CCccceEEE--ECCHHHHH
Confidence 5799999999932 2223333 11 3799999998888877776643 33 3 23442 2222 111
Q ss_pred -cccCCC-CcEEEEeeccccccccchhhhHHHHHHhHc---cCCcEEEEEeecCCC
Q 041748 281 -NIRKKK-HETVAANLVFHLNTLKIYLKISDTLNLVRS---IKPTIVTLVEQEGSR 331 (479)
Q Consensus 281 -~L~~~~-~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~---L~P~VvtlvE~ea~~ 331 (479)
.+.-.. =+.|+.|..+. . .....+|..+.. |+|.-+++++.....
T Consensus 118 ~~~~~~~~fD~I~~~~~~~---~---~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 118 KQPQNQPHFDVVFLDPPFH---F---NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp TSCCSSCCEEEEEECCCSS---S---CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HhhccCCCCCEEEECCCCC---C---ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 011112 24666666642 1 234567777754 999987777655443
No 101
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=58.23 E-value=30 Score=33.19 Aligned_cols=134 Identities=9% Similarity=0.101 Sum_probs=70.9
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVNI 282 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~L 282 (479)
.-+|+|+|.|.|. +...++.. +|.-+||+|+.+...++.+.+++...+..+.+-..++. ..+. +....
T Consensus 79 ~~~VLdiG~G~G~----~~~~l~~~-----~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~--~~D~~~~l~~ 147 (283)
T 2i7c_A 79 PKNVLVVGGGDGG----IIRELCKY-----KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF--IEDASKFLEN 147 (283)
T ss_dssp CCEEEEEECTTSH----HHHHHTTC-----TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE--ESCHHHHHHH
T ss_pred CCeEEEEeCCcCH----HHHHHHHc-----CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEE--ECChHHHHHh
Confidence 4589999999883 45556654 23579999999888887777766443322210123332 2222 11000
Q ss_pred cCCCCcEEEEeeccccccccchhhh--HHHHHHh-HccCCcEEEEEeecCCCCCCchhHHHHHHHHHHHHHhhhh
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKI--SDTLNLV-RSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSL 354 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~--~~~L~~I-r~L~P~VvtlvE~ea~~ns~~F~~RF~eaL~yYsalFDSL 354 (479)
.-..=++|++++....+ .. ... ..+++.+ +.|+|.-++++...+.... ...+...+......|...
T Consensus 148 ~~~~fD~Ii~d~~~~~~--~~-~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~---~~~~~~~~~~l~~~F~~v 216 (283)
T 2i7c_A 148 VTNTYDVIIVDSSDPIG--PA-ETLFNQNFYEKIYNALKPNGYCVAQCESLWIH---VGTIKNMIGYAKKLFKKV 216 (283)
T ss_dssp CCSCEEEEEEECCCTTT--GG-GGGSSHHHHHHHHHHEEEEEEEEEECCCTTTC---HHHHHHHHHHHHTTCSEE
T ss_pred CCCCceEEEEcCCCCCC--cc-hhhhHHHHHHHHHHhcCCCcEEEEECCCcccC---HHHHHHHHHHHHHHCCce
Confidence 11122577777643221 11 122 4677666 5799998877754332222 233333344444445443
No 102
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=57.81 E-value=40 Score=30.16 Aligned_cols=101 Identities=7% Similarity=-0.001 Sum_probs=56.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccc-eec
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGS-RLV 280 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~-~l~ 280 (479)
.-+|+|+|.|.|.- ...|+.+ -|+..+||+|+.+...++.+.+++.+ .| +. .+|. ..+. +..
T Consensus 65 ~~~vLdiG~G~G~~----~~~la~~----~~~~~~v~~vD~~~~~~~~a~~~~~~----~~-~~~~v~~~--~~d~~~~~ 129 (225)
T 3tr6_A 65 AKKVIDIGTFTGYS----AIAMGLA----LPKDGTLITCDVDEKSTALAKEYWEK----AG-LSDKIGLR--LSPAKDTL 129 (225)
T ss_dssp CSEEEEECCTTSHH----HHHHHTT----CCTTCEEEEEESCHHHHHHHHHHHHH----TT-CTTTEEEE--ESCHHHHH
T ss_pred CCEEEEeCCcchHH----HHHHHHh----CCCCCEEEEEeCCHHHHHHHHHHHHH----CC-CCCceEEE--eCCHHHHH
Confidence 45899999999842 3345544 13357999999998888777766543 33 32 4443 2222 111
Q ss_pred -cccC----CCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 281 -NIRK----KKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 281 -~L~~----~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
.+.- ..=+.|+++.. ......+|..+ +.|+|.-+++++.
T Consensus 130 ~~~~~~~~~~~fD~v~~~~~--------~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 130 AELIHAGQAWQYDLIYIDAD--------KANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp HHHHTTTCTTCEEEEEECSC--------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHhhhccCCCCccEEEECCC--------HHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 1111 12234443332 11233455444 7799998888764
No 103
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=57.77 E-value=40 Score=32.17 Aligned_cols=136 Identities=8% Similarity=0.035 Sum_probs=74.6
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVNI 282 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~L 282 (479)
.-+|+|+|.|.| .+...++.+ +|.-+||+|+-+...++.+.+++...+..+.+=..++. ..+. +....
T Consensus 76 ~~~VLdiG~G~G----~~~~~l~~~-----~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~--~~D~~~~l~~ 144 (275)
T 1iy9_A 76 PEHVLVVGGGDG----GVIREILKH-----PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQ--VDDGFMHIAK 144 (275)
T ss_dssp CCEEEEESCTTC----HHHHHHTTC-----TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEE--ESCSHHHHHT
T ss_pred CCEEEEECCchH----HHHHHHHhC-----CCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEE--ECcHHHHHhh
Confidence 468999999998 344555554 23468999999988888888877666443421123332 3322 11000
Q ss_pred cCCCCcEEEEeeccccccccch-hhhHHHHHHh-HccCCcEEEEEeecCCCCCCchhHHHHHHHHHHHHHhhhhh
Q 041748 283 RKKKHETVAANLVFHLNTLKIY-LKISDTLNLV-RSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSLD 355 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~-~~~~~~L~~I-r~L~P~VvtlvE~ea~~ns~~F~~RF~eaL~yYsalFDSLd 355 (479)
.-..=++|+++... +..... ....++++.+ +.|+|.-++++....... -...+.+.+......|....
T Consensus 145 ~~~~fD~Ii~d~~~--~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~---~~~~~~~~~~~l~~~F~~v~ 214 (275)
T 1iy9_A 145 SENQYDVIMVDSTE--PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWF---TPELITNVQRDVKEIFPITK 214 (275)
T ss_dssp CCSCEEEEEESCSS--CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTT---CHHHHHHHHHHHHTTCSEEE
T ss_pred CCCCeeEEEECCCC--CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc---cHHHHHHHHHHHHHhCCCeE
Confidence 01223567776653 211110 0124566554 679999888876432111 14455555555555565433
No 104
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=57.75 E-value=31 Score=34.02 Aligned_cols=112 Identities=17% Similarity=0.125 Sum_probs=59.6
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe-
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL- 266 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv- 266 (479)
++|++.+.-. +.-+|+|+|.|.|. |...++.+ | .-++|||+.+. .++.+.+++ +..| +
T Consensus 40 ~~i~~~l~~~-----~~~~VLDiGcGtG~----ls~~la~~---g---~~~V~~vD~s~-~~~~a~~~~----~~~~-l~ 98 (348)
T 2y1w_A 40 RAILQNHTDF-----KDKIVLDVGCGSGI----LSFFAAQA---G---ARKIYAVEAST-MAQHAEVLV----KSNN-LT 98 (348)
T ss_dssp HHHHHTGGGT-----TTCEEEEETCTTSH----HHHHHHHT---T---CSEEEEEECST-HHHHHHHHH----HHTT-CT
T ss_pred HHHHhccccC-----CcCEEEEcCCCccH----HHHHHHhC---C---CCEEEEECCHH-HHHHHHHHH----HHcC-CC
Confidence 4566665432 34689999999884 44455554 1 24899999873 444333332 2223 3
Q ss_pred -eEEEEEeeccceeccccCC-CCcEEEEeeccccccccchhhhHHHHHHhHccCCcEEEEEe
Q 041748 267 -VFEFQGLIRGSRLVNIRKK-KHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVE 326 (479)
Q Consensus 267 -pFeF~~v~~~~~l~~L~~~-~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P~VvtlvE 326 (479)
..+| +..+. ..+... .=+.|+.+.+ ++|+..+.....+...-+-|+|.-+++..
T Consensus 99 ~~v~~--~~~d~--~~~~~~~~~D~Ivs~~~--~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 99 DRIVV--IPGKV--EEVSLPEQVDIIISEPM--GYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TTEEE--EESCT--TTCCCSSCEEEEEECCC--BTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CcEEE--EEcch--hhCCCCCceeEEEEeCc--hhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 2333 23322 112111 1134544444 45665443344455555789999887754
No 105
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=57.68 E-value=23 Score=32.72 Aligned_cols=108 Identities=19% Similarity=0.141 Sum_probs=54.3
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee-EEEEEeeccc-eecc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV-FEFQGLIRGS-RLVN 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp-FeF~~v~~~~-~l~~ 281 (479)
.=+|+|+|.|.| .+...||.+. |..++|||+.+.+.+-+...+..+-++..| ++ .+|. ..+. .+ .
T Consensus 25 ~~~vLDiGCG~G----~~~~~la~~~-----~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~-~~~v~~~--~~d~~~l-~ 91 (225)
T 3p2e_A 25 DRVHIDLGTGDG----RNIYKLAIND-----QNTFYIGIDPVKENLFDISKKIIKKPSKGG-LSNVVFV--IAAAESL-P 91 (225)
T ss_dssp SEEEEEETCTTS----HHHHHHHHTC-----TTEEEEEECSCCGGGHHHHHHHTSCGGGTC-CSSEEEE--CCBTTBC-C
T ss_pred CCEEEEEeccCc----HHHHHHHHhC-----CCCEEEEEeCCHHHHHHHHHHHHHHHHHcC-CCCeEEE--EcCHHHh-h
Confidence 457999999988 3555677651 348999999874444222222222233333 33 4442 2222 22 1
Q ss_pred ccCCCCcEEEEeeccccccccch--hhhHHHHHHh-HccCCcEEEEE
Q 041748 282 IRKKKHETVAANLVFHLNTLKIY--LKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 282 L~~~~~EaLaVN~~~~Lh~L~~~--~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
.. ..+-+..|.+.+..+++... .....+|+.+ |-|+|.-.++.
T Consensus 92 ~~-~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 92 FE-LKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp GG-GTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred hh-ccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 11 12444444444433322100 0123456555 57999877766
No 106
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=57.29 E-value=98 Score=27.07 Aligned_cols=110 Identities=17% Similarity=0.261 Sum_probs=62.8
Q ss_pred hhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcC
Q 041748 185 TANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFR 264 (479)
Q Consensus 185 tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lg 264 (479)
...+.|++.+... +.-+|+|+|.|.| .+...|+.+ + .++|||+.+...++.+.++ +
T Consensus 39 ~~~~~~~~~~~~~-----~~~~vLdiG~G~G----~~~~~l~~~---~----~~v~~vD~s~~~~~~a~~~--------~ 94 (227)
T 3e8s_A 39 VTDQAILLAILGR-----QPERVLDLGCGEG----WLLRALADR---G----IEAVGVDGDRTLVDAARAA--------G 94 (227)
T ss_dssp THHHHHHHHHHHT-----CCSEEEEETCTTC----HHHHHHHTT---T----CEEEEEESCHHHHHHHHHT--------C
T ss_pred cccHHHHHHhhcC-----CCCEEEEeCCCCC----HHHHHHHHC---C----CEEEEEcCCHHHHHHHHHh--------c
Confidence 3556788888763 4589999999999 345666665 2 3799999887766655544 3
Q ss_pred CeeEEEEEeeccceeccccCCCC---cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 265 NLVFEFQGLIRGSRLVNIRKKKH---ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 265 nvpFeF~~v~~~~~l~~L~~~~~---EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
++.|....+. ++......++ +.|+.+.. || .. ....+|+.+ +.|+|.-.+++..
T Consensus 95 ~~~~~~~~~~---~~~~~~~~~~~~fD~v~~~~~--l~-~~---~~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 95 AGEVHLASYA---QLAEAKVPVGKDYDLICANFA--LL-HQ---DIIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp SSCEEECCHH---HHHTTCSCCCCCEEEEEEESC--CC-SS---CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccchhhHH---hhcccccccCCCccEEEECch--hh-hh---hHHHHHHHHHHHhCCCeEEEEEe
Confidence 2433221111 1111112222 34444444 44 22 234566555 5789987766653
No 107
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=56.78 E-value=26 Score=34.68 Aligned_cols=104 Identities=13% Similarity=0.114 Sum_probs=58.8
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccceecc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGSRLVN 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~~l~~ 281 (479)
.-.|+|+|.|.|. +...|+.+ | .-++|||+.+ +.++.+.+++ +..| ++ .+|. ..+.+-..
T Consensus 67 ~~~VLDvGcG~G~----~~~~la~~---g---~~~v~gvD~s-~~l~~a~~~~----~~~~-~~~~v~~~--~~d~~~~~ 128 (349)
T 3q7e_A 67 DKVVLDVGSGTGI----LCMFAAKA---G---ARKVIGIECS-SISDYAVKIV----KANK-LDHVVTII--KGKVEEVE 128 (349)
T ss_dssp TCEEEEESCTTSH----HHHHHHHT---T---CSEEEEEECS-THHHHHHHHH----HHTT-CTTTEEEE--ESCTTTCC
T ss_pred CCEEEEEeccchH----HHHHHHHC---C---CCEEEEECcH-HHHHHHHHHH----HHcC-CCCcEEEE--ECcHHHcc
Confidence 4579999999993 44556654 1 3589999988 4555554443 3333 43 4443 22221111
Q ss_pred ccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 282 IRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 282 L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
+....=++|+.|++ .+.+..+.....+|..+ +-|+|.-+++.+.
T Consensus 129 ~~~~~fD~Iis~~~--~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 129 LPVEKVDIIISEWM--GYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp CSSSCEEEEEECCC--BBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred CCCCceEEEEEccc--cccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 21112245555544 23344444566788777 7799998877543
No 108
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=56.60 E-value=34 Score=32.02 Aligned_cols=45 Identities=16% Similarity=-0.009 Sum_probs=31.1
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLV 257 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~ 257 (479)
+.-+|+|+|.|.|+. ++ .++.+ + --+||||+.+...++.+.+++.
T Consensus 55 ~g~~vLDiGCG~G~~--~~--~~~~~----~--~~~v~g~D~s~~~l~~a~~~~~ 99 (263)
T 2a14_A 55 QGDTLIDIGSGPTIY--QV--LAACD----S--FQDITLSDFTDRNREELEKWLK 99 (263)
T ss_dssp CEEEEEESSCTTCCG--GG--TTGGG----T--EEEEEEEESCHHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHH--HH--HHHHh----h--hcceeeccccHHHHHHHHHHHh
Confidence 467899999999842 11 12222 1 2379999999888888877663
No 109
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=56.12 E-value=35 Score=29.26 Aligned_cols=106 Identities=9% Similarity=0.095 Sum_probs=60.6
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccc-eec
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGS-RLV 280 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~-~l~ 280 (479)
.-.|+|+|.|.|. +...|+.+ + .-++|||+.+...++.+.+++. ..+ ++ .+|. ..+. +..
T Consensus 32 ~~~vLDlGcG~G~----~~~~l~~~--~----~~~v~~vD~~~~~~~~a~~~~~----~~~-~~~~~~~~--~~d~~~~~ 94 (177)
T 2esr_A 32 GGRVLDLFAGSGG----LAIEAVSR--G----MSAAVLVEKNRKAQAIIQDNII----MTK-AENRFTLL--KMEAERAI 94 (177)
T ss_dssp SCEEEEETCTTCH----HHHHHHHT--T----CCEEEEECCCHHHHHHHHHHHH----TTT-CGGGEEEE--CSCHHHHH
T ss_pred CCeEEEeCCCCCH----HHHHHHHc--C----CCEEEEEECCHHHHHHHHHHHH----HcC-CCCceEEE--ECcHHHhH
Confidence 3579999999983 23345554 1 2589999998887877766553 334 43 4443 3322 111
Q ss_pred cccCCCCcEEEEeeccccccccchhhhHHHHHHh---HccCCcEEEEEeecCCCC
Q 041748 281 NIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV---RSIKPTIVTLVEQEGSRS 332 (479)
Q Consensus 281 ~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I---r~L~P~VvtlvE~ea~~n 332 (479)
...-..=+.|+.|..+.. .....++..+ +-|+|.-+++++......
T Consensus 95 ~~~~~~fD~i~~~~~~~~------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYAK------ETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp HHBCSCEEEEEECCSSHH------HHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred HhhcCCCCEEEECCCCCc------chHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 100011256676766421 1223455555 778999888887655443
No 110
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=55.05 E-value=14 Score=38.79 Aligned_cols=113 Identities=16% Similarity=0.084 Sum_probs=61.1
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV 267 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp 267 (479)
.+|++.+... +.-+|+|+|.|.|. +...|+.+ + ..+||||+.+. .++.+.++ ++..| +.
T Consensus 148 ~~il~~l~~~-----~~~~VLDiGcGtG~----la~~la~~--~----~~~V~gvD~s~-~l~~A~~~----~~~~g-l~ 206 (480)
T 3b3j_A 148 RAILQNHTDF-----KDKIVLDVGCGSGI----LSFFAAQA--G----ARKIYAVEAST-MAQHAEVL----VKSNN-LT 206 (480)
T ss_dssp HHHHHTGGGT-----TTCEEEEESCSTTH----HHHHHHHT--T----CSEEEEEECHH-HHHHHHHH----HHHTT-CT
T ss_pred HHHHHhhhhc-----CCCEEEEecCcccH----HHHHHHHc--C----CCEEEEEEcHH-HHHHHHHH----HHHcC-CC
Confidence 3455555321 34689999999995 44455654 1 35999999865 45444333 33333 42
Q ss_pred --EEEEEeeccceeccccCC-CCcEEEEeeccccccccchhhhHHHHHHhHccCCcEEEEEee
Q 041748 268 --FEFQGLIRGSRLVNIRKK-KHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVEQ 327 (479)
Q Consensus 268 --FeF~~v~~~~~l~~L~~~-~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P~VvtlvE~ 327 (479)
.+|. ..+. ..+.+. .=+.|+.|.+ ++|+.++.....+...-+-|+|.-+++.+.
T Consensus 207 ~~v~~~--~~d~--~~~~~~~~fD~Ivs~~~--~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 207 DRIVVI--PGKV--EEVSLPEQVDIIISEPM--GYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp TTEEEE--ESCT--TTCCCSSCEEEEECCCC--HHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred CcEEEE--ECch--hhCccCCCeEEEEEeCc--hHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 4443 2222 111111 1244554544 455554434444555567899998877543
No 111
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=54.51 E-value=71 Score=29.59 Aligned_cols=106 Identities=17% Similarity=0.211 Sum_probs=59.0
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccc-eec
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGS-RLV 280 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~-~l~ 280 (479)
.-.|+|+|.|.|. +...|+.+ ++ . +||||+.+...++.+.+++.. .+ +. .+| +..+. +..
T Consensus 50 ~~~vLDlG~G~G~----~~~~la~~----~~-~-~v~gvDi~~~~~~~a~~n~~~----~~-~~~~v~~--~~~D~~~~~ 112 (259)
T 3lpm_A 50 KGKIIDLCSGNGI----IPLLLSTR----TK-A-KIVGVEIQERLADMAKRSVAY----NQ-LEDQIEI--IEYDLKKIT 112 (259)
T ss_dssp CCEEEETTCTTTH----HHHHHHTT----CC-C-EEEEECCSHHHHHHHHHHHHH----TT-CTTTEEE--ECSCGGGGG
T ss_pred CCEEEEcCCchhH----HHHHHHHh----cC-C-cEEEEECCHHHHHHHHHHHHH----CC-CcccEEE--EECcHHHhh
Confidence 4689999999993 44466766 12 2 899999988877777666542 33 33 343 23322 111
Q ss_pred c-ccCCCCcEEEEeeccccc---cccch------------hhhHHHHHHh-HccCCcEEEEEe
Q 041748 281 N-IRKKKHETVAANLVFHLN---TLKIY------------LKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 281 ~-L~~~~~EaLaVN~~~~Lh---~L~~~------------~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
. +.-..=+.|+.|-.+.-. ++... .....++..+ +-|+|.-.+++.
T Consensus 113 ~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 113 DLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp GTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 1 112223678888765332 22111 1234566655 568998777664
No 112
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=54.38 E-value=93 Score=28.14 Aligned_cols=104 Identities=10% Similarity=-0.055 Sum_probs=55.6
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eecc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVN 281 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~ 281 (479)
+.-+|+|+|.|.|. +...|+.. + +. ++|||+.+...++.+.++ ++..+ ...+|. ..+. ++.
T Consensus 60 ~~~~vLDiGcGtG~----~~~~l~~~----~-~~-~v~gvD~s~~~l~~a~~~----~~~~~-~~v~~~--~~d~~~~~- 121 (236)
T 1zx0_A 60 KGGRVLEVGFGMAI----AASKVQEA----P-ID-EHWIIECNDGVFQRLRDW----APRQT-HKVIPL--KGLWEDVA- 121 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHHTS----C-EE-EEEEEECCHHHHHHHHHH----GGGCS-SEEEEE--ESCHHHHG-
T ss_pred CCCeEEEEeccCCH----HHHHHHhc----C-CC-eEEEEcCCHHHHHHHHHH----HHhcC-CCeEEE--ecCHHHhh-
Confidence 35789999999993 34445544 1 22 899999998877766653 33444 444443 3322 111
Q ss_pred ccCCCC--cEEEE-eeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 282 IRKKKH--ETVAA-NLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 282 L~~~~~--EaLaV-N~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
....++ ++|+. +..+..+... ......+|+.+ +-|+|.-+++.
T Consensus 122 ~~~~~~~fD~V~~d~~~~~~~~~~-~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 122 PTLPDGHFDGILYDTYPLSEETWH-THQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp GGSCTTCEEEEEECCCCCBGGGTT-THHHHHHHHTHHHHEEEEEEEEE
T ss_pred cccCCCceEEEEECCcccchhhhh-hhhHHHHHHHHHHhcCCCeEEEE
Confidence 022233 34444 2222122221 12234556554 67899887664
No 113
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=54.35 E-value=81 Score=26.83 Aligned_cols=107 Identities=10% Similarity=0.106 Sum_probs=59.3
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV 267 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp 267 (479)
..+++.+-. +.-+|+|+|.|.|. +...|+.+ + .++|+|+.+...++.+.+++ .++.
T Consensus 37 ~~~l~~~~~------~~~~vLdiG~G~G~----~~~~l~~~---~----~~v~~~D~~~~~~~~a~~~~-------~~~~ 92 (195)
T 3cgg_A 37 ARLIDAMAP------RGAKILDAGCGQGR----IGGYLSKQ---G----HDVLGTDLDPILIDYAKQDF-------PEAR 92 (195)
T ss_dssp HHHHHHHSC------TTCEEEEETCTTTH----HHHHHHHT---T----CEEEEEESCHHHHHHHHHHC-------TTSE
T ss_pred HHHHHHhcc------CCCeEEEECCCCCH----HHHHHHHC---C----CcEEEEcCCHHHHHHHHHhC-------CCCc
Confidence 456666643 35689999999884 34455554 2 28999998887776665543 2233
Q ss_pred EEEEEeeccceeccccCCCC--cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 268 FEFQGLIRGSRLVNIRKKKH--ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 268 FeF~~v~~~~~l~~L~~~~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
|. ..+. ..+...++ +.++.+ ...+||+..+ ....+|..+ +.|+|.-.+++.
T Consensus 93 --~~--~~d~--~~~~~~~~~~D~i~~~-~~~~~~~~~~-~~~~~l~~~~~~l~~~G~l~~~ 146 (195)
T 3cgg_A 93 --WV--VGDL--SVDQISETDFDLIVSA-GNVMGFLAED-GREPALANIHRALGADGRAVIG 146 (195)
T ss_dssp --EE--ECCT--TTSCCCCCCEEEEEEC-CCCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEE
T ss_pred --EE--Eccc--ccCCCCCCceeEEEEC-CcHHhhcChH-HHHHHHHHHHHHhCCCCEEEEE
Confidence 22 2211 11222222 344433 1235666432 334555554 668998776665
No 114
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=54.23 E-value=92 Score=28.57 Aligned_cols=101 Identities=9% Similarity=-0.117 Sum_probs=54.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
--+|+|+|.|.|. ....|+.+ .| -++|+|+.+.+.++.+. +.++..+ ....|. ..++......
T Consensus 61 G~rVLdiG~G~G~----~~~~~~~~----~~--~~v~~id~~~~~~~~a~----~~~~~~~-~~~~~~--~~~a~~~~~~ 123 (236)
T 3orh_A 61 GGRVLEVGFGMAI----AASKVQEA----PI--DEHWIIECNDGVFQRLR----DWAPRQT-HKVIPL--KGLWEDVAPT 123 (236)
T ss_dssp CEEEEEECCTTSH----HHHHHTTS----CE--EEEEEEECCHHHHHHHH----HHGGGCS-SEEEEE--ESCHHHHGGG
T ss_pred CCeEEEECCCccH----HHHHHHHh----CC--cEEEEEeCCHHHHHHHH----HHHhhCC-CceEEE--eehHHhhccc
Confidence 4689999999983 23345554 22 27899998877665444 4455555 555543 2222111111
Q ss_pred CCCC--cEEEEee---ccccccccchhhhHHHHHHh-HccCCcEEEE
Q 041748 284 KKKH--ETVAANL---VFHLNTLKIYLKISDTLNLV-RSIKPTIVTL 324 (479)
Q Consensus 284 ~~~~--EaLaVN~---~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtl 324 (479)
...+ +.+.... ...++|+. ....+++.+ |-|+|--+.+
T Consensus 124 ~~~~~FD~i~~D~~~~~~~~~~~~---~~~~~~~e~~rvLkPGG~l~ 167 (236)
T 3orh_A 124 LPDGHFDGILYDTYPLSEETWHTH---QFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp SCTTCEEEEEECCCCCBGGGTTTH---HHHHHHHTHHHHEEEEEEEE
T ss_pred ccccCCceEEEeeeecccchhhhc---chhhhhhhhhheeCCCCEEE
Confidence 2222 3444332 33344443 344666644 6699987654
No 115
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=53.51 E-value=24 Score=32.89 Aligned_cols=48 Identities=19% Similarity=0.247 Sum_probs=36.3
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSF 259 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~f 259 (479)
+...|+|+|.|.|. ++..||.+. |...++||+.+...++.+.+++...
T Consensus 46 ~~~~vLDiGcG~G~----~~~~la~~~-----p~~~v~GiDis~~~l~~A~~~~~~l 93 (235)
T 3ckk_A 46 AQVEFADIGCGYGG----LLVELSPLF-----PDTLILGLEIRVKVSDYVQDRIRAL 93 (235)
T ss_dssp CCEEEEEETCTTCH----HHHHHGGGS-----TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEccCCcH----HHHHHHHHC-----CCCeEEEEECCHHHHHHHHHHHHHH
Confidence 46789999999993 455677762 2468999999988888887776554
No 116
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=53.47 E-value=43 Score=32.50 Aligned_cols=136 Identities=13% Similarity=0.118 Sum_probs=72.3
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhh-cCCeeEEEEEeeccc-eecc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKS-FRNLVFEFQGLIRGS-RLVN 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~-lgnvpFeF~~v~~~~-~l~~ 281 (479)
.-+|+|+|.|.|. +...|+.. +|.-+||+|+-+.+.++.+.+++...... +.+-.++|. ..+. +...
T Consensus 84 ~~~VLdiG~G~G~----~~~~l~~~-----~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~--~~D~~~~l~ 152 (294)
T 3adn_A 84 AKHVLIIGGGDGA----MLREVTRH-----KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLV--IDDGVNFVN 152 (294)
T ss_dssp CCEEEEESCTTCH----HHHHHHTC-----TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEE--CSCSCC---
T ss_pred CCEEEEEeCChhH----HHHHHHhC-----CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEE--EChHHHHHh
Confidence 4589999999984 45556655 23569999998888888888777665321 111122222 2221 1100
Q ss_pred ccCCCCcEEEEeeccccccccch-hhhHHHHHHh-HccCCcEEEEEeecCCCCCCchhHHHHHHHHHHHHHhhhhh
Q 041748 282 IRKKKHETVAANLVFHLNTLKIY-LKISDTLNLV-RSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSLD 355 (479)
Q Consensus 282 L~~~~~EaLaVN~~~~Lh~L~~~-~~~~~~L~~I-r~L~P~VvtlvE~ea~~ns~~F~~RF~eaL~yYsalFDSLd 355 (479)
..-..=++|++++.... .... .....+++.+ +.|+|.-++++.-++....+ +.+.+.+......|....
T Consensus 153 ~~~~~fDvIi~D~~~p~--~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~---~~~~~~~~~l~~~F~~v~ 223 (294)
T 3adn_A 153 QTSQTFDVIISDCTDPI--GPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ---EEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp CCCCCEEEEEECC------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC---HHHHHHHHHHHHHCSEEE
T ss_pred hcCCCccEEEECCCCcc--CcchhccHHHHHHHHHHhcCCCCEEEEecCCcccch---HHHHHHHHHHHHHCCCeE
Confidence 01112256777665321 1111 0114566655 67999988777654332223 345555555566676654
No 117
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=53.31 E-value=94 Score=26.67 Aligned_cols=45 Identities=22% Similarity=0.214 Sum_probs=32.9
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSF 259 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~f 259 (479)
.-+|+|+|.|.|. +...|+.+ .-++|||+.+...++.+.+++.+.
T Consensus 23 ~~~vLDiGcG~G~----~~~~la~~-------~~~v~~vD~s~~~l~~a~~~~~~~ 67 (185)
T 3mti_A 23 ESIVVDATMGNGN----DTAFLAGL-------SKKVYAFDVQEQALGKTSQRLSDL 67 (185)
T ss_dssp TCEEEESCCTTSH----HHHHHHTT-------SSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCH----HHHHHHHh-------CCEEEEEECCHHHHHHHHHHHHHc
Confidence 3579999999994 23345554 247999999998888887776643
No 118
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=52.91 E-value=57 Score=34.11 Aligned_cols=107 Identities=7% Similarity=-0.079 Sum_probs=58.7
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHH---HHhhcCCe---eEEEEEeecc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVS---FSKSFRNL---VFEFQGLIRG 276 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~---fA~~lgnv---pFeF~~v~~~ 276 (479)
..=+|+|+|.|.|. +.-.+|.+ .+ .-+++||+-+...++-+.+.+.. .++.+| + .++| +..+
T Consensus 173 ~gd~VLDLGCGtG~----l~l~lA~~--~g---~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G-l~~~rVef--i~GD 240 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQ----VVLQVAAA--TN---CKHHYGVEKADIPAKYAETMDREFRKWMKWYG-KKHAEYTL--ERGD 240 (438)
T ss_dssp TTCEEEEESCTTSH----HHHHHHHH--CC---CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT-BCCCEEEE--EECC
T ss_pred CCCEEEEeCCCCCH----HHHHHHHH--CC---CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC-CCCCCeEE--EECc
Confidence 34579999999992 33345544 12 23799999887666555554443 345555 4 3444 3333
Q ss_pred c-eecc-ccCCCCcEEEEeeccccccccchhhhHHHHHHhHccCCcEEEEEe
Q 041748 277 S-RLVN-IRKKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVE 326 (479)
Q Consensus 277 ~-~l~~-L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P~VvtlvE 326 (479)
. ++.- ..+..=++|++|..+ +. ......+....+.|+|--.+++-
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~--F~---pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFA--FG---PEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTT--CC---HHHHHHHHHHHTTSCTTCEEEES
T ss_pred ccCCccccccCCccEEEEcccc--cC---chHHHHHHHHHHcCCCCcEEEEe
Confidence 2 1110 011233577788764 21 11233444566889998766553
No 119
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=52.52 E-value=69 Score=28.56 Aligned_cols=102 Identities=14% Similarity=0.073 Sum_probs=57.6
Q ss_pred eEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe-eEEEEEeeccc-eeccc
Q 041748 205 LHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL-VFEFQGLIRGS-RLVNI 282 (479)
Q Consensus 205 VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv-pFeF~~v~~~~-~l~~L 282 (479)
-+|+|+|.|.|.-- ..++.+ +. -+||||+.+...++.+.+++.. .+ + ..+|. ..+. +....
T Consensus 56 ~~vLDlgcG~G~~~----~~l~~~---~~---~~V~~vD~s~~~l~~a~~~~~~----~~-~~~v~~~--~~D~~~~~~~ 118 (202)
T 2fpo_A 56 AQCLDCFAGSGALG----LEALSR---YA---AGATLIEMDRAVSQQLIKNLAT----LK-AGNARVV--NSNAMSFLAQ 118 (202)
T ss_dssp CEEEETTCTTCHHH----HHHHHT---TC---SEEEEECSCHHHHHHHHHHHHH----TT-CCSEEEE--CSCHHHHHSS
T ss_pred CeEEEeCCCcCHHH----HHHHhc---CC---CEEEEEECCHHHHHHHHHHHHH----cC-CCcEEEE--ECCHHHHHhh
Confidence 57999999999422 223333 21 2899999998888877766543 33 3 23332 2222 11111
Q ss_pred cCCCCcEEEEeeccccccccchhhhHHHHHHhHc---cCCcEEEEEeecC
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKISDTLNLVRS---IKPTIVTLVEQEG 329 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~---L~P~VvtlvE~ea 329 (479)
....=+.|++|..|+. .....++..+.. |+|.-+++++...
T Consensus 119 ~~~~fD~V~~~~p~~~------~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 119 KGTPHNIVFVDPPFRR------GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CCCCEEEEEECCSSST------TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred cCCCCCEEEECCCCCC------CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1111246666666431 223456666655 9998877776543
No 120
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=51.90 E-value=43 Score=30.47 Aligned_cols=99 Identities=6% Similarity=-0.014 Sum_probs=54.2
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eecc-
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVN- 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~- 281 (479)
.-.|+|+|.|.|. +...|+.+ .| .-++|||+.+...++.+.++ |+...|+.|. ..+. +...
T Consensus 75 ~~~VLDlGcG~G~----~~~~la~~--~~---~~~v~gvD~s~~~~~~a~~~----~~~~~~v~~~----~~d~~~~~~~ 137 (230)
T 1fbn_A 75 DSKILYLGASAGT----TPSHVADI--AD---KGIVYAIEYAPRIMRELLDA----CAERENIIPI----LGDANKPQEY 137 (230)
T ss_dssp TCEEEEESCCSSH----HHHHHHHH--TT---TSEEEEEESCHHHHHHHHHH----TTTCTTEEEE----ECCTTCGGGG
T ss_pred CCEEEEEcccCCH----HHHHHHHH--cC---CcEEEEEECCHHHHHHHHHH----hhcCCCeEEE----ECCCCCcccc
Confidence 3579999999984 34456665 12 34899999988877766654 3333444432 2221 1100
Q ss_pred ccCC-CCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 282 IRKK-KHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 282 L~~~-~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
+... .=++|+ |++.+......+|..+ +.|+|.-.+++.
T Consensus 138 ~~~~~~~D~v~-------~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 138 ANIVEKVDVIY-------EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp TTTSCCEEEEE-------ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCccEEEEE-------EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 1111 112222 4554433345666665 489998666554
No 121
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=50.30 E-value=32 Score=29.28 Aligned_cols=46 Identities=13% Similarity=0.023 Sum_probs=34.1
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLV 257 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~ 257 (479)
..-+|+|+|.|.| .+...|+.+ . |..++|+|+.+...++.+.+++.
T Consensus 25 ~~~~vldiG~G~G----~~~~~l~~~--~---~~~~v~~vD~~~~~~~~a~~~~~ 70 (178)
T 3hm2_A 25 PHETLWDIGGGSG----SIAIEWLRS--T---PQTTAVCFEISEERRERILSNAI 70 (178)
T ss_dssp TTEEEEEESTTTT----HHHHHHHTT--S---SSEEEEEECSCHHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCC----HHHHHHHHH--C---CCCeEEEEeCCHHHHHHHHHHHH
Confidence 4568999999988 345556665 1 35899999999888877776654
No 122
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=49.64 E-value=54 Score=29.42 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=60.1
Q ss_pred HHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe
Q 041748 187 NQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL 266 (479)
Q Consensus 187 NqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv 266 (479)
-..|.+.+... +.-+|+|+|.|.|. +...|+.+ + + -++|||+.+...++.+.+++.. -+ +
T Consensus 32 ~~~l~~~~~~~-----~~~~vLdiG~G~G~----~~~~l~~~---~-~--~~v~~vD~s~~~~~~a~~~~~~----~~-~ 91 (243)
T 3bkw_A 32 WPALRAMLPEV-----GGLRIVDLGCGFGW----FCRWAHEH---G-A--SYVLGLDLSEKMLARARAAGPD----TG-I 91 (243)
T ss_dssp HHHHHHHSCCC-----TTCEEEEETCTTCH----HHHHHHHT---T-C--SEEEEEESCHHHHHHHHHTSCS----SS-E
T ss_pred HHHHHHhcccc-----CCCEEEEEcCcCCH----HHHHHHHC---C-C--CeEEEEcCCHHHHHHHHHhccc----CC-c
Confidence 34566665431 35689999999984 34455655 1 1 1899999887766665543321 12 3
Q ss_pred eEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 267 VFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 267 pFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
+|. ..+ ...+...++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 92 --~~~--~~d--~~~~~~~~~~fD~v~~~~~l~~~~~---~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 92 --TYE--RAD--LDKLHLPQDSFDLAYSSLALHYVED---VARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp --EEE--ECC--GGGCCCCTTCEEEEEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEE
T ss_pred --eEE--EcC--hhhccCCCCCceEEEEeccccccch---HHHHHHHHHHhcCcCcEEEEE
Confidence 332 222 1122232332222223345788854 34566555 568998665554
No 123
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=49.28 E-value=56 Score=33.00 Aligned_cols=122 Identities=17% Similarity=0.224 Sum_probs=68.4
Q ss_pred hHHHHHHHHHhchh-ccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcC
Q 041748 186 ANQAILEAFEEQIE-NNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFR 264 (479)
Q Consensus 186 ANqAILEA~~ge~~-~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lg 264 (479)
..+.+++.+..... ...+.-+|+|+|.|.|. +...|+.+ + .+||+|+.+...++.+.+++. ..+
T Consensus 215 ~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~----~~~~la~~---g----~~V~gvDis~~al~~A~~n~~----~~~ 279 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVRGRQVLDLGAGYGA----LTLPLARM---G----AEVVGVEDDLASVLSLQKGLE----ANA 279 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCEEEEETCTTST----THHHHHHT---T----CEEEEEESBHHHHHHHHHHHH----HTT
T ss_pred HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCH----HHHHHHHc---C----CEEEEEECCHHHHHHHHHHHH----HcC
Confidence 44667777753100 00134589999999994 34445554 2 389999998888877776654 344
Q ss_pred CeeEEEEEeeccceeccccCCCCcEEEEeeccccccccc--hhhhHHHHH-HhHccCCcEEEEEee
Q 041748 265 NLVFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKI--YLKISDTLN-LVRSIKPTIVTLVEQ 327 (479)
Q Consensus 265 nvpFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~--~~~~~~~L~-~Ir~L~P~VvtlvE~ 327 (479)
+..+|. ..+..-....-..=+.|+.|..| |+... ......++. ..+.|+|.-.+++.-
T Consensus 280 -~~v~~~--~~D~~~~~~~~~~fD~Ii~npp~--~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 280 -LKAQAL--HSDVDEALTEEARFDIIVTNPPF--HVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp -CCCEEE--ECSTTTTSCTTCCEEEEEECCCC--CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCeEEE--EcchhhccccCCCeEEEEECCch--hhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 555553 22221000111222577777775 44211 123345555 446789988777763
No 124
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=48.47 E-value=74 Score=28.35 Aligned_cols=101 Identities=10% Similarity=0.081 Sum_probs=56.6
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe--eEEEEEeeccc-ee-
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL--VFEFQGLIRGS-RL- 279 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv--pFeF~~v~~~~-~l- 279 (479)
.-+|+|+|.+.|.- ...|+.+ -|+.-+||+|+.+...++.+.+++.+ .| + ..+|. ..+. +.
T Consensus 59 ~~~vLdiG~G~G~~----~~~la~~----~~~~~~v~~vD~~~~~~~~a~~~~~~----~~-~~~~v~~~--~~d~~~~~ 123 (223)
T 3duw_A 59 ARNILEIGTLGGYS----TIWLARG----LSSGGRVVTLEASEKHADIARSNIER----AN-LNDRVEVR--TGLALDSL 123 (223)
T ss_dssp CSEEEEECCTTSHH----HHHHHTT----CCSSCEEEEEESCHHHHHHHHHHHHH----TT-CTTTEEEE--ESCHHHHH
T ss_pred CCEEEEecCCccHH----HHHHHHh----CCCCCEEEEEECCHHHHHHHHHHHHH----cC-CCCcEEEE--EcCHHHHH
Confidence 46899999998832 3345554 23346999999988878777666543 33 3 24443 2222 11
Q ss_pred ccccC---CCCcEEEEeeccccccccchhhhHHHHHH-hHccCCcEEEEEee
Q 041748 280 VNIRK---KKHETVAANLVFHLNTLKIYLKISDTLNL-VRSIKPTIVTLVEQ 327 (479)
Q Consensus 280 ~~L~~---~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~-Ir~L~P~VvtlvE~ 327 (479)
..+.- .+=+.|+++... .....+|.. .+.|+|.-+++++.
T Consensus 124 ~~~~~~~~~~fD~v~~d~~~--------~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 124 QQIENEKYEPFDFIFIDADK--------QNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp HHHHHTTCCCCSEEEECSCG--------GGHHHHHHHHHHTCCTTCEEEEES
T ss_pred HHHHhcCCCCcCEEEEcCCc--------HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 11110 122455554431 122345544 47799998888763
No 125
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=48.37 E-value=71 Score=28.11 Aligned_cols=96 Identities=9% Similarity=0.073 Sum_probs=55.1
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee-EEEEEeeccceecc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV-FEFQGLIRGSRLVN 281 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp-FeF~~v~~~~~l~~ 281 (479)
+.-+|+|+|.|.|.. ...|+.+ + -++|+|+.+...++.+.+++... | ++ .+|. ..+.....
T Consensus 77 ~~~~vLdiG~G~G~~----~~~la~~---~----~~v~~vD~~~~~~~~a~~~~~~~----~-~~~v~~~--~~d~~~~~ 138 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQ----TAILAHL---V----QHVCSVERIKGLQWQARRRLKNL----D-LHNVSTR--HGDGWQGW 138 (210)
T ss_dssp TTCEEEEECCTTSHH----HHHHHHH---S----SEEEEEESCHHHHHHHHHHHHHT----T-CCSEEEE--ESCGGGCC
T ss_pred CCCEEEEEcCCCCHH----HHHHHHh---C----CEEEEEecCHHHHHHHHHHHHHc----C-CCceEEE--ECCcccCC
Confidence 456899999998843 3345554 1 37899999988888777766543 3 33 3332 22221000
Q ss_pred ccCCCCcEEEEeeccccccccchhhhHHHHHHhHccCCcEEEEEe
Q 041748 282 IRKKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVE 326 (479)
Q Consensus 282 L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P~VvtlvE 326 (479)
..-.+=+.++++.. +|++.+. ..+.|+|.-.+++.
T Consensus 139 ~~~~~~D~i~~~~~--~~~~~~~--------~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 139 QARAPFDAIIVTAA--PPEIPTA--------LMTQLDEGGILVLP 173 (210)
T ss_dssp GGGCCEEEEEESSB--CSSCCTH--------HHHTEEEEEEEEEE
T ss_pred ccCCCccEEEEccc--hhhhhHH--------HHHhcccCcEEEEE
Confidence 11112245555544 5777652 45778887655554
No 126
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=48.19 E-value=66 Score=31.04 Aligned_cols=98 Identities=8% Similarity=0.032 Sum_probs=55.6
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee-EEEEEeeccc-eec
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV-FEFQGLIRGS-RLV 280 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp-FeF~~v~~~~-~l~ 280 (479)
+.-+|+|+|.|.|. +...|+.+ +++.-++|||+.+.+.++.+.+++.. .| ++ .+|. ..+. +..
T Consensus 75 ~~~~VLDiGcG~G~----~~~~la~~----~~~~~~v~gvD~s~~~~~~a~~~~~~----~g-~~~v~~~--~~d~~~~~ 139 (317)
T 1dl5_A 75 KGMRVLEIGGGTGY----NAAVMSRV----VGEKGLVVSVEYSRKICEIAKRNVER----LG-IENVIFV--CGDGYYGV 139 (317)
T ss_dssp TTCEEEEECCTTSH----HHHHHHHH----HCTTCEEEEEESCHHHHHHHHHHHHH----TT-CCSEEEE--ESCGGGCC
T ss_pred CcCEEEEecCCchH----HHHHHHHh----cCCCCEEEEEECCHHHHHHHHHHHHH----cC-CCCeEEE--ECChhhcc
Confidence 34689999999883 44555655 12235899999998888777666543 33 32 3443 2222 111
Q ss_pred cccCCCCcEEEEeeccccccccchhhhHHHHHHhHccCCcEEEEEe
Q 041748 281 NIRKKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVE 326 (479)
Q Consensus 281 ~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P~VvtlvE 326 (479)
....+=+.|+++.+ +||+.+ ...+.|+|.-++++.
T Consensus 140 -~~~~~fD~Iv~~~~--~~~~~~--------~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 140 -PEFSPYDVIFVTVG--VDEVPE--------TWFTQLKEGGRVIVP 174 (317)
T ss_dssp -GGGCCEEEEEECSB--BSCCCH--------HHHHHEEEEEEEEEE
T ss_pred -ccCCCeEEEEEcCC--HHHHHH--------HHHHhcCCCcEEEEE
Confidence 11112245665555 567652 234678887666554
No 127
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=47.63 E-value=27 Score=31.37 Aligned_cols=42 Identities=14% Similarity=0.056 Sum_probs=31.3
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRL 256 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL 256 (479)
.-+|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.++.
T Consensus 23 ~~~vLD~GCG~G~----~~~~la~~---g----~~V~gvD~S~~~l~~a~~~~ 64 (203)
T 1pjz_A 23 GARVLVPLCGKSQ----DMSWLSGQ---G----YHVVGAELSEAAVERYFTER 64 (203)
T ss_dssp TCEEEETTTCCSH----HHHHHHHH---C----CEEEEEEECHHHHHHHHHHH
T ss_pred CCEEEEeCCCCcH----hHHHHHHC---C----CeEEEEeCCHHHHHHHHHHc
Confidence 4689999999993 34457766 2 38999999988887776543
No 128
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=46.90 E-value=45 Score=29.42 Aligned_cols=62 Identities=16% Similarity=0.185 Sum_probs=41.8
Q ss_pred hhhhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHH
Q 041748 183 HFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLV 257 (479)
Q Consensus 183 h~tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~ 257 (479)
+....+.+++.+.... .+.-.|+|+|.|.|. +...|+.. + ..++|||+.+...++.+.+++.
T Consensus 43 ~~~~~~~~~~~l~~~~---~~~~~vLDiG~G~G~----~~~~l~~~--~----~~~v~~vD~s~~~~~~a~~~~~ 104 (205)
T 3grz_A 43 NHQTTQLAMLGIERAM---VKPLTVADVGTGSGI----LAIAAHKL--G----AKSVLATDISDESMTAAEENAA 104 (205)
T ss_dssp CHHHHHHHHHHHHHHC---SSCCEEEEETCTTSH----HHHHHHHT--T----CSEEEEEESCHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHhc---cCCCEEEEECCCCCH----HHHHHHHC--C----CCEEEEEECCHHHHHHHHHHHH
Confidence 4455667777776421 245789999999983 33446654 1 3589999998887777766554
No 129
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=46.80 E-value=38 Score=31.86 Aligned_cols=44 Identities=20% Similarity=-0.016 Sum_probs=30.8
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLV 257 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~ 257 (479)
.-+|+|+|.|.|. +..+ +.+. ++ -+||||+.+...++.+.+++.
T Consensus 72 ~~~vLDiGcG~G~-~~~l----~~~~--~~---~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 72 GRTLIDIGSGPTV-YQLL----SACS--HF---EDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CSEEEEETCTTCC-GGGT----TGGG--GC---SEEEEECSCHHHHHHHHHHHT
T ss_pred CCeEEEECCCcCh-HHHH----hhcc--CC---CeEEEeCCCHHHHHHHHHHHh
Confidence 4689999999997 4332 2221 11 389999999888887776653
No 130
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=46.34 E-value=72 Score=31.00 Aligned_cols=110 Identities=10% Similarity=0.056 Sum_probs=62.1
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhh-cCCeeEEEEEeeccc-eecc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKS-FRNLVFEFQGLIRGS-RLVN 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~-lgnvpFeF~~v~~~~-~l~~ 281 (479)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+...++.+.+++.+.... +.+-..+|. ..+. +...
T Consensus 78 ~~~VLdiG~G~G~----~~~~l~~~-----~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~--~~D~~~~l~ 146 (314)
T 1uir_A 78 PKRVLIVGGGEGA----TLREVLKH-----PTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLV--IDDARAYLE 146 (314)
T ss_dssp CCEEEEEECTTSH----HHHHHTTS-----TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE--ESCHHHHHH
T ss_pred CCeEEEEcCCcCH----HHHHHHhc-----CCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEE--EchHHHHHH
Confidence 4689999999983 45566665 23469999999988888888777654332 210123332 2222 1100
Q ss_pred ccCCCCcEEEEeecccccc-c-cchhh--hHHHHHHh-HccCCcEEEEEe
Q 041748 282 IRKKKHETVAANLVFHLNT-L-KIYLK--ISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 282 L~~~~~EaLaVN~~~~Lh~-L-~~~~~--~~~~L~~I-r~L~P~VvtlvE 326 (479)
..-..=++|+++... |. + ..... ...+++.+ +.|+|.-++++.
T Consensus 147 ~~~~~fD~Ii~d~~~--~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 147 RTEERYDVVIIDLTD--PVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp HCCCCEEEEEEECCC--CBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred hcCCCccEEEECCCC--cccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 111122577777653 22 1 10111 24666665 579999777764
No 131
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=46.29 E-value=33 Score=28.13 Aligned_cols=38 Identities=16% Similarity=0.233 Sum_probs=31.8
Q ss_pred CCceEEEeeecCCh----HHHHHHHHHHHHHHhhcCCeeEEEE
Q 041748 233 NRISFRITGFGRSI----EELQETENRLVSFSKSFRNLVFEFQ 271 (479)
Q Consensus 233 gpP~LRITgI~~~~----~~l~etg~rL~~fA~~lgnvpFeF~ 271 (479)
|||.-|||....+. ..|+++-+.+.+..+..| ..|+|+
T Consensus 50 gaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~g-G~~~v~ 91 (93)
T 2qn6_B 50 GAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEEN-VDISVV 91 (93)
T ss_dssp STTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTT-EEEEEC
T ss_pred cCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEE
Confidence 67888888887653 468999999999999998 899885
No 132
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=46.23 E-value=86 Score=30.76 Aligned_cols=98 Identities=11% Similarity=0.118 Sum_probs=53.8
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe--eEEEEEeeccceecc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL--VFEFQGLIRGSRLVN 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv--pFeF~~v~~~~~l~~ 281 (479)
.-.|+|+|.|.|. +...++.+ | .-++|||+.+. .++.+.+++. ..| + ..+| +..+. ..
T Consensus 65 ~~~VLDiGcGtG~----ls~~la~~---g---~~~v~gvD~s~-~~~~a~~~~~----~~~-~~~~i~~--~~~d~--~~ 124 (340)
T 2fyt_A 65 DKVVLDVGCGTGI----LSMFAAKA---G---AKKVLGVDQSE-ILYQAMDIIR----LNK-LEDTITL--IKGKI--EE 124 (340)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT---T---CSEEEEEESST-HHHHHHHHHH----HTT-CTTTEEE--EESCT--TT
T ss_pred CCEEEEeeccCcH----HHHHHHHc---C---CCEEEEEChHH-HHHHHHHHHH----HcC-CCCcEEE--EEeeH--HH
Confidence 4589999999994 34455554 2 24899999874 5555544443 222 2 2333 22222 12
Q ss_pred ccCCCC--cEEEEeec-cccccccchhhhHHHHHHh-HccCCcEEEE
Q 041748 282 IRKKKH--ETVAANLV-FHLNTLKIYLKISDTLNLV-RSIKPTIVTL 324 (479)
Q Consensus 282 L~~~~~--EaLaVN~~-~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtl 324 (479)
+.+.++ ++|+.|.+ +.+++ +.....+|..+ +-|+|.-.++
T Consensus 125 ~~~~~~~~D~Ivs~~~~~~l~~---~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 125 VHLPVEKVDVIISEWMGYFLLF---ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCCSCSCEEEEEECCCBTTBTT---TCHHHHHHHHHHHHEEEEEEEE
T ss_pred hcCCCCcEEEEEEcCchhhccC---HHHHHHHHHHHHhhcCCCcEEE
Confidence 222222 45665553 23333 33455677665 6789988766
No 133
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=45.75 E-value=1.4e+02 Score=25.27 Aligned_cols=116 Identities=11% Similarity=0.091 Sum_probs=64.6
Q ss_pred hHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCC
Q 041748 186 ANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRN 265 (479)
Q Consensus 186 ANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgn 265 (479)
..+.+++.+.-. +.-+|+|+|.|.|. +...|+.+ ..++||++.+...++.+.+++.. .+
T Consensus 40 ~~~~l~~~~~~~-----~~~~vLdiG~G~G~----~~~~~~~~-------~~~v~~~D~~~~~~~~a~~~~~~----~~- 98 (194)
T 1dus_A 40 GTKILVENVVVD-----KDDDILDLGCGYGV----IGIALADE-------VKSTTMADINRRAIKLAKENIKL----NN- 98 (194)
T ss_dssp HHHHHHHHCCCC-----TTCEEEEETCTTSH----HHHHHGGG-------SSEEEEEESCHHHHHHHHHHHHH----TT-
T ss_pred HHHHHHHHcccC-----CCCeEEEeCCCCCH----HHHHHHHc-------CCeEEEEECCHHHHHHHHHHHHH----cC-
Confidence 345566666432 35689999999883 34455554 13899999988877777666543 33
Q ss_pred ee---EEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEeecC
Q 041748 266 LV---FEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQEG 329 (479)
Q Consensus 266 vp---FeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ea 329 (479)
++ .+|.. .+..- .+....=+.|+.|..+ |+-. .....+|..+ +.|+|.-.+++....
T Consensus 99 ~~~~~~~~~~--~d~~~-~~~~~~~D~v~~~~~~--~~~~--~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 99 LDNYDIRVVH--SDLYE-NVKDRKYNKIITNPPI--RAGK--EVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp CTTSCEEEEE--CSTTT-TCTTSCEEEEEECCCS--TTCH--HHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred CCccceEEEE--Cchhc-ccccCCceEEEECCCc--ccch--hHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 43 55532 22210 1111122456666553 3311 2334555544 668998776665433
No 134
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=45.44 E-value=57 Score=31.42 Aligned_cols=118 Identities=13% Similarity=0.065 Sum_probs=64.8
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHH--------------HHHH---hhc-CC
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRL--------------VSFS---KSF-RN 265 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL--------------~~fA---~~l-gn 265 (479)
.+.|.|.|.+.|----+|--.|++.- +..++..+|||++-+.+.|+.+.+.. .+|- ..- ++
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~-~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADAL-GMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHH-CSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhc-ccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 58999999999953334444455441 11122479999999988888776543 2221 000 00
Q ss_pred ---e------eEEEEEeeccceeccccCC-CCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 266 ---L------VFEFQGLIRGSRLVNIRKK-KHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 266 ---v------pFeF~~v~~~~~l~~L~~~-~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
| ..+|... ++...... .+..=+|-|..-|+++.++ ....++..+ +.|+|.-+.+++.
T Consensus 185 ~~~v~~~lr~~V~F~~~----dl~~~~~~~~~~fDlI~crnvliyf~~~-~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSV----NLLEKQYNVPGPFDAIFCRNVMIYFDKT-TQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEEC----CTTCSSCCCCCCEEEEEECSSGGGSCHH-HHHHHHHHHGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEec----ccCCCCCCcCCCeeEEEECCchHhCCHH-HHHHHHHHHHHHhCCCcEEEEEe
Confidence 0 0122111 11111111 2444445555567888654 345566555 6899999988863
No 135
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=44.74 E-value=51 Score=32.53 Aligned_cols=108 Identities=12% Similarity=0.111 Sum_probs=59.2
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV 267 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp 267 (479)
..|++.+.+- .+.-+|+|+|.|.|. +...|+.+ . |.+++|+++. ...++ .|+..++|
T Consensus 198 ~~l~~~~~~~----~~~~~vLDvG~G~G~----~~~~l~~~----~-~~~~~~~~D~-~~~~~--------~a~~~~~v- 254 (372)
T 1fp1_D 198 KRMLEIYTGF----EGISTLVDVGGGSGR----NLELIISK----Y-PLIKGINFDL-PQVIE--------NAPPLSGI- 254 (372)
T ss_dssp HHHHHHCCTT----TTCSEEEEETCTTSH----HHHHHHHH----C-TTCEEEEEEC-HHHHT--------TCCCCTTE-
T ss_pred HHHHHHhhcc----CCCCEEEEeCCCCcH----HHHHHHHH----C-CCCeEEEeCh-HHHHH--------hhhhcCCC-
Confidence 4566665321 135789999999983 46667776 1 3578999987 43332 34434433
Q ss_pred EEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEE-EEee
Q 041748 268 FEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVT-LVEQ 327 (479)
Q Consensus 268 FeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvt-lvE~ 327 (479)
+|.. .+. .. .+...++++ +...|||+.+.. ...+|+.+ +.|+|.-.+ ++|.
T Consensus 255 -~~~~--~d~--~~-~~~~~D~v~--~~~~lh~~~d~~-~~~~l~~~~~~L~pgG~l~i~e~ 307 (372)
T 1fp1_D 255 -EHVG--GDM--FA-SVPQGDAMI--LKAVCHNWSDEK-CIEFLSNCHKALSPNGKVIIVEF 307 (372)
T ss_dssp -EEEE--CCT--TT-CCCCEEEEE--EESSGGGSCHHH-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -EEEe--CCc--cc-CCCCCCEEE--EecccccCCHHH-HHHHHHHHHHhcCCCCEEEEEEe
Confidence 3322 211 11 011123444 444578887653 34566655 568887544 4443
No 136
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=42.79 E-value=96 Score=26.39 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=58.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe--eEEEEEeeccc-eec
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL--VFEFQGLIRGS-RLV 280 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv--pFeF~~v~~~~-~l~ 280 (479)
.-+|+|+|.|.|.- ...++.+ + .-++|||+.+...++.+.+++... + + ..+|. ..+. +..
T Consensus 45 ~~~vLD~GcG~G~~----~~~~~~~--~----~~~v~~vD~~~~~~~~a~~~~~~~----~-~~~~~~~~--~~d~~~~~ 107 (187)
T 2fhp_A 45 GGMALDLYSGSGGL----AIEAVSR--G----MDKSICIEKNFAALKVIKENIAIT----K-EPEKFEVR--KMDANRAL 107 (187)
T ss_dssp SCEEEETTCTTCHH----HHHHHHT--T----CSEEEEEESCHHHHHHHHHHHHHH----T-CGGGEEEE--ESCHHHHH
T ss_pred CCCEEEeCCccCHH----HHHHHHc--C----CCEEEEEECCHHHHHHHHHHHHHh----C-CCcceEEE--ECcHHHHH
Confidence 35899999999942 2234444 1 258999999888887777665543 2 3 24443 2222 111
Q ss_pred -ccc--CCCCcEEEEeeccccccccchhhhHHHHHH---hHccCCcEEEEEeecCCC
Q 041748 281 -NIR--KKKHETVAANLVFHLNTLKIYLKISDTLNL---VRSIKPTIVTLVEQEGSR 331 (479)
Q Consensus 281 -~L~--~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~---Ir~L~P~VvtlvE~ea~~ 331 (479)
.+. ...=+.|+.|..+..+ ....++.. .+-|+|.-+++++.....
T Consensus 108 ~~~~~~~~~fD~i~~~~~~~~~------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 108 EQFYEEKLQFDLVLLDPPYAKQ------EIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHHHTTCCEEEEEECCCGGGC------CHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHHhcCCCCCEEEECCCCCch------hHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 111 1222567777664311 11233333 466899988887755443
No 137
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=42.53 E-value=33 Score=30.38 Aligned_cols=48 Identities=19% Similarity=0.086 Sum_probs=34.9
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSF 259 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~f 259 (479)
+.-.|+|+|.|.|. +...|+.+ + |..++|+|+.+.+.++.+.+++...
T Consensus 40 ~~~~vLDiG~G~G~----~~~~la~~---~--~~~~v~~vD~s~~~~~~a~~~~~~~ 87 (204)
T 3e05_A 40 DDLVMWDIGAGSAS----VSIEASNL---M--PNGRIFALERNPQYLGFIRDNLKKF 87 (204)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHH---C--TTSEEEEEECCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCH----HHHHHHHH---C--CCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 45689999999885 34456655 1 2468999999988888877766543
No 138
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=42.46 E-value=64 Score=29.26 Aligned_cols=98 Identities=14% Similarity=0.089 Sum_probs=55.1
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-+|+|+|.|.|.- ...|+.+- |..++|||+.+...++.+.++ .+++.| .. .+. ..+.
T Consensus 34 ~~~vLdiG~G~G~~----~~~l~~~~-----~~~~v~~~D~s~~~~~~a~~~-------~~~~~~--~~--~d~--~~~~ 91 (259)
T 2p35_A 34 VLNGYDLGCGPGNS----TELLTDRY-----GVNVITGIDSDDDMLEKAADR-------LPNTNF--GK--ADL--ATWK 91 (259)
T ss_dssp CSSEEEETCTTTHH----HHHHHHHH-----CTTSEEEEESCHHHHHHHHHH-------STTSEE--EE--CCT--TTCC
T ss_pred CCEEEEecCcCCHH----HHHHHHhC-----CCCEEEEEECCHHHHHHHHHh-------CCCcEE--EE--CCh--hhcC
Confidence 45799999999853 33444441 124799999988777666554 233443 22 211 1122
Q ss_pred CCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 284 KKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 284 ~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
.++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.+++..
T Consensus 92 -~~~~fD~v~~~~~l~~~~~---~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 92 -PAQKADLLYANAVFQWVPD---HLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp -CSSCEEEEEEESCGGGSTT---HHHHHHHHGGGEEEEEEEEEEE
T ss_pred -ccCCcCEEEEeCchhhCCC---HHHHHHHHHHhcCCCeEEEEEe
Confidence 2232222333445788854 34566655 6789986655543
No 139
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=41.84 E-value=69 Score=28.14 Aligned_cols=92 Identities=13% Similarity=0.100 Sum_probs=52.2
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-.|+|+|.|.|. +...| . .-++|||+.+...++.+.+++ +++.| +..+ ...+.
T Consensus 37 ~~~vLdiG~G~G~----~~~~l--~-------~~~v~~vD~s~~~~~~a~~~~-------~~~~~----~~~d--~~~~~ 90 (211)
T 2gs9_A 37 GESLLEVGAGTGY----WLRRL--P-------YPQKVGVEPSEAMLAVGRRRA-------PEATW----VRAW--GEALP 90 (211)
T ss_dssp CSEEEEETCTTCH----HHHHC--C-------CSEEEEECCCHHHHHHHHHHC-------TTSEE----ECCC--TTSCC
T ss_pred CCeEEEECCCCCH----hHHhC--C-------CCeEEEEeCCHHHHHHHHHhC-------CCcEE----EEcc--cccCC
Confidence 4689999999983 22223 1 127999999887777666554 22443 1221 11222
Q ss_pred CCCC--cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 284 KKKH--ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 284 ~~~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
..++ +.|+.+ ..|||+.+ ...+|+.+ +-|+|.-.+++.
T Consensus 91 ~~~~~fD~v~~~--~~l~~~~~---~~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 91 FPGESFDVVLLF--TTLEFVED---VERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp SCSSCEEEEEEE--SCTTTCSC---HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCcEEEEEEc--ChhhhcCC---HHHHHHHHHHHcCCCCEEEEE
Confidence 3333 344433 45788864 34555554 668998655553
No 140
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=41.58 E-value=1.6e+02 Score=26.16 Aligned_cols=104 Identities=10% Similarity=0.029 Sum_probs=58.2
Q ss_pred HHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee-
Q 041748 189 AILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV- 267 (479)
Q Consensus 189 AILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp- 267 (479)
.+++.+.-. +.-.|+|+|.|.|. +...|+.+ .-++|||+.+.+.++.+.+++. ..| ++
T Consensus 46 ~~l~~l~~~-----~~~~vLDlGcG~G~----~~~~la~~-------~~~v~~vD~s~~~~~~a~~~~~----~~g-~~~ 104 (204)
T 3njr_A 46 LTLAALAPR-----RGELLWDIGGGSGS----VSVEWCLA-------GGRAITIEPRADRIENIQKNID----TYG-LSP 104 (204)
T ss_dssp HHHHHHCCC-----TTCEEEEETCTTCH----HHHHHHHT-------TCEEEEEESCHHHHHHHHHHHH----HTT-CTT
T ss_pred HHHHhcCCC-----CCCEEEEecCCCCH----HHHHHHHc-------CCEEEEEeCCHHHHHHHHHHHH----HcC-CCC
Confidence 455555432 34579999999884 33445554 1479999999888877766543 344 54
Q ss_pred -EEEEEeeccc-eeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 268 -FEFQGLIRGS-RLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 268 -FeF~~v~~~~-~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.+|. ..+. +.. .....=++++++..+ ... +|..+ +.|+|.-.+++.
T Consensus 105 ~v~~~--~~d~~~~~-~~~~~~D~v~~~~~~---------~~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 105 RMRAV--QGTAPAAL-ADLPLPEAVFIGGGG---------SQA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp TEEEE--ESCTTGGG-TTSCCCSEEEECSCC---------CHH-HHHHHHHHSCTTCEEEEE
T ss_pred CEEEE--eCchhhhc-ccCCCCCEEEECCcc---------cHH-HHHHHHHhcCCCcEEEEE
Confidence 4443 2222 111 111223466655422 223 55555 568997666654
No 141
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=41.57 E-value=63 Score=30.40 Aligned_cols=104 Identities=8% Similarity=-0.012 Sum_probs=57.0
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHH-H------H-h------hcCCeeE
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVS-F------S-K------SFRNLVF 268 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~-f------A-~------~lgnvpF 268 (479)
+.-.|+|+|.|.|. +...||.+ | .++|||+.+...++.+.++... + + . ..+ ...
T Consensus 68 ~~~~vLD~GCG~G~----~~~~La~~---G----~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i 135 (252)
T 2gb4_A 68 SGLRVFFPLCGKAI----EMKWFADR---G----HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSS-GSI 135 (252)
T ss_dssp CSCEEEETTCTTCT----HHHHHHHT---T----CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETT-SSE
T ss_pred CCCeEEEeCCCCcH----HHHHHHHC---C----CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCC-Cce
Confidence 35689999999993 35567776 2 3899999998877766443210 0 0 0 001 122
Q ss_pred EEEEeeccceeccccCCC-CcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEE
Q 041748 269 EFQGLIRGSRLVNIRKKK-HETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVT 323 (479)
Q Consensus 269 eF~~v~~~~~l~~L~~~~-~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvt 323 (479)
+|. .. ++..+.... +..=+|-+...|+++..+ .+..+++.+ +-|+|.-..
T Consensus 136 ~~~--~~--D~~~l~~~~~~~FD~V~~~~~l~~l~~~-~~~~~l~~~~~~LkpGG~l 187 (252)
T 2gb4_A 136 SLY--CC--SIFDLPRANIGKFDRIWDRGALVAINPG-DHDRYADIILSLLRKEFQY 187 (252)
T ss_dssp EEE--ES--CTTTGGGGCCCCEEEEEESSSTTTSCGG-GHHHHHHHHHHTEEEEEEE
T ss_pred EEE--EC--ccccCCcccCCCEEEEEEhhhhhhCCHH-HHHHHHHHHHHHcCCCeEE
Confidence 332 12 122222221 333333344467888643 445667665 569998665
No 142
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=41.10 E-value=1.2e+02 Score=26.92 Aligned_cols=46 Identities=11% Similarity=0.008 Sum_probs=31.3
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLV 257 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~ 257 (479)
.-+|+|+|.+.|. +...|+.. .|+.-+||+|+.+...++.+.+++.
T Consensus 70 ~~~vLdiG~G~G~----~~~~la~~----~~~~~~v~~vD~~~~~~~~a~~~~~ 115 (229)
T 2avd_A 70 AKKALDLGTFTGY----SALALALA----LPADGRVVTCEVDAQPPELGRPLWR 115 (229)
T ss_dssp CCEEEEECCTTSH----HHHHHHTT----SCTTCEEEEEESCSHHHHHHHHHHH
T ss_pred CCEEEEEcCCccH----HHHHHHHh----CCCCCEEEEEECCHHHHHHHHHHHH
Confidence 4589999999883 23345543 1234699999988877776666554
No 143
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=40.72 E-value=32 Score=31.15 Aligned_cols=46 Identities=9% Similarity=0.112 Sum_probs=33.4
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVS 258 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~ 258 (479)
.-.|+|+|.|.|. +...||.+. |..++|||+.+...++.+.+++.+
T Consensus 39 ~~~vLDiGcG~G~----~~~~la~~~-----p~~~v~giD~s~~~l~~a~~~~~~ 84 (213)
T 2fca_A 39 NPIHIEVGTGKGQ----FISGMAKQN-----PDINYIGIELFKSVIVTAVQKVKD 84 (213)
T ss_dssp CCEEEEECCTTSH----HHHHHHHHC-----TTSEEEEECSCHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCH----HHHHHHHHC-----CCCCEEEEEechHHHHHHHHHHHH
Confidence 4569999999993 344566651 246899999998888877766543
No 144
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=40.46 E-value=79 Score=28.69 Aligned_cols=45 Identities=13% Similarity=-0.036 Sum_probs=31.5
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLV 257 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~ 257 (479)
+.-.|+|+|.|.|.- ...|+.+ ++ .+||||+.+...++.+.+++.
T Consensus 56 ~~~~vLDlGcG~G~~----~~~l~~~----~~--~~v~gvD~s~~~l~~a~~~~~ 100 (265)
T 2i62_A 56 KGELLIDIGSGPTIY----QLLSACE----SF--TEIIVSDYTDQNLWELQKWLK 100 (265)
T ss_dssp CEEEEEEESCTTCCG----GGTTGGG----TE--EEEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEECCCccHH----HHHHhhc----cc--CeEEEecCCHHHHHHHHHHHh
Confidence 457899999999832 1224443 22 689999998888877776653
No 145
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=40.25 E-value=48 Score=30.97 Aligned_cols=113 Identities=14% Similarity=0.118 Sum_probs=60.5
Q ss_pred hhhhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhh
Q 041748 183 HFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKS 262 (479)
Q Consensus 183 h~tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~ 262 (479)
+.-+.+.+++++.... .+.-+|+|+|.|.|. +...++.. ++ ++|||+.+...++.+.+++. .
T Consensus 103 ~~~tt~~~~~~l~~~~---~~~~~VLDiGcG~G~----l~~~la~~----g~---~v~gvDi~~~~v~~a~~n~~----~ 164 (254)
T 2nxc_A 103 HHETTRLALKALARHL---RPGDKVLDLGTGSGV----LAIAAEKL----GG---KALGVDIDPMVLPQAEANAK----R 164 (254)
T ss_dssp CSHHHHHHHHHHHHHC---CTTCEEEEETCTTSH----HHHHHHHT----TC---EEEEEESCGGGHHHHHHHHH----H
T ss_pred CCHHHHHHHHHHHHhc---CCCCEEEEecCCCcH----HHHHHHHh----CC---eEEEEECCHHHHHHHHHHHH----H
Confidence 3444455666665321 134689999999984 33445554 33 89999988877777766543 3
Q ss_pred cCCeeEEEEEeeccceeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 263 FRNLVFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 263 lgnvpFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
.+ ++.+|. ..+... .+.-.+=+.|+.|... |+ ...++..+ +.|+|.-.++.
T Consensus 165 ~~-~~v~~~--~~d~~~-~~~~~~fD~Vv~n~~~--~~------~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 165 NG-VRPRFL--EGSLEA-ALPFGPFDLLVANLYA--EL------HAALAPRYREALVPGGRALL 216 (254)
T ss_dssp TT-CCCEEE--ESCHHH-HGGGCCEEEEEEECCH--HH------HHHHHHHHHHHEEEEEEEEE
T ss_pred cC-CcEEEE--ECChhh-cCcCCCCCEEEECCcH--HH------HHHHHHHHHHHcCCCCEEEE
Confidence 44 553332 222210 0211222456656432 22 23344433 55788765554
No 146
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=40.21 E-value=40 Score=31.29 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=25.4
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQ 250 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~ 250 (479)
+.-+|+|+|.|.|. +...|+.. ..++|||+.+...++
T Consensus 34 ~~~~vLDiGcG~G~----~~~~l~~~-------~~~v~gvD~s~~~~~ 70 (261)
T 3ege_A 34 KGSVIADIGAGTGG----YSVALANQ-------GLFVYAVEPSIVMRQ 70 (261)
T ss_dssp TTCEEEEETCTTSH----HHHHHHTT-------TCEEEEECSCHHHHH
T ss_pred CCCEEEEEcCcccH----HHHHHHhC-------CCEEEEEeCCHHHHH
Confidence 35789999999994 33344432 258999998875443
No 147
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=40.11 E-value=41 Score=32.47 Aligned_cols=110 Identities=17% Similarity=0.217 Sum_probs=65.2
Q ss_pred HHHHHHHhcCCCccchh-hhhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCC
Q 041748 167 LAFTDLYRVSPYFQLAH-FTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRS 245 (479)
Q Consensus 167 ~A~~~f~e~sP~~kfah-~tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~ 245 (479)
..+..-|.+.|=-++++ |..|+.|++.+-....- ... +|+|+|.|.| .|-..|+.+ + -++|||+.+
T Consensus 11 ~~~~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~-~~~-~VLEIG~G~G----~lt~~L~~~---~----~~V~avEid 77 (271)
T 3fut_A 11 RALLERHGLFADKRFGQNFLVSEAHLRRIVEAARP-FTG-PVFEVGPGLG----ALTRALLEA---G----AEVTAIEKD 77 (271)
T ss_dssp HHHHHHTTCCCSTTSSCCEECCHHHHHHHHHHHCC-CCS-CEEEECCTTS----HHHHHHHHT---T----CCEEEEESC
T ss_pred HHHHHhcCCCccccCCccccCCHHHHHHHHHhcCC-CCC-eEEEEeCchH----HHHHHHHHc---C----CEEEEEECC
Confidence 33344456677777776 66677666666543111 245 9999999999 467778876 2 269999988
Q ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc-cCCCCcEEEEeecccc
Q 041748 246 IEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI-RKKKHETVAANLVFHL 298 (479)
Q Consensus 246 ~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L-~~~~~EaLaVN~~~~L 298 (479)
.+.++.+.+++. . + .+++ +..+..-..+ .......|+-|..++.
T Consensus 78 ~~~~~~l~~~~~----~-~--~v~v--i~~D~l~~~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 78 LRLRPVLEETLS----G-L--PVRL--VFQDALLYPWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp GGGHHHHHHHTT----T-S--SEEE--EESCGGGSCGGGSCTTEEEEEEECSSC
T ss_pred HHHHHHHHHhcC----C-C--CEEE--EECChhhCChhhccCccEEEecCcccc
Confidence 877766665543 1 2 2333 3333211111 1123457888888754
No 148
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=39.20 E-value=1e+02 Score=26.99 Aligned_cols=95 Identities=19% Similarity=0.141 Sum_probs=52.4
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNI 282 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L 282 (479)
+.-+|+|+|.|.| .+...|+.+ + .++|||+.+...++.+. ... . +|. ..+..-..+
T Consensus 32 ~~~~vLdiG~G~G----~~~~~l~~~---~----~~~~~~D~~~~~~~~~~--------~~~-~--~~~--~~d~~~~~~ 87 (230)
T 3cc8_A 32 EWKEVLDIGCSSG----ALGAAIKEN---G----TRVSGIEAFPEAAEQAK--------EKL-D--HVV--LGDIETMDM 87 (230)
T ss_dssp TCSEEEEETCTTS----HHHHHHHTT---T----CEEEEEESSHHHHHHHH--------TTS-S--EEE--ESCTTTCCC
T ss_pred CCCcEEEeCCCCC----HHHHHHHhc---C----CeEEEEeCCHHHHHHHH--------HhC-C--cEE--EcchhhcCC
Confidence 3568999999988 344556654 1 58999998876554433 322 2 222 222111012
Q ss_pred cCCCC--cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RKKKH--ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~~~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
...++ +.|+. ...|||+.+. ..+|..+ +.|+|.-.+++.
T Consensus 88 ~~~~~~fD~v~~--~~~l~~~~~~---~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 88 PYEEEQFDCVIF--GDVLEHLFDP---WAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp CSCTTCEEEEEE--ESCGGGSSCH---HHHHHHTGGGEEEEEEEEEE
T ss_pred CCCCCccCEEEE--CChhhhcCCH---HHHHHHHHHHcCCCCEEEEE
Confidence 22223 33433 3457888653 4666665 568897655554
No 149
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=38.42 E-value=1.2e+02 Score=28.04 Aligned_cols=101 Identities=8% Similarity=0.069 Sum_probs=57.3
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccc-e-e
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGS-R-L 279 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~-~-l 279 (479)
.-.|+|+|.+.|.- ...|+.+ -|+..+||+|+.+...++.+.+++.+ .| ++ .+|. ..+. + +
T Consensus 64 ~~~VLdiG~G~G~~----~~~la~~----~~~~~~v~~vD~s~~~~~~a~~~~~~----~g-~~~~v~~~--~~d~~~~l 128 (248)
T 3tfw_A 64 AKRILEIGTLGGYS----TIWMARE----LPADGQLLTLEADAHHAQVARENLQL----AG-VDQRVTLR--EGPALQSL 128 (248)
T ss_dssp CSEEEEECCTTSHH----HHHHHTT----SCTTCEEEEEECCHHHHHHHHHHHHH----TT-CTTTEEEE--ESCHHHHH
T ss_pred CCEEEEecCCchHH----HHHHHHh----CCCCCEEEEEECCHHHHHHHHHHHHH----cC-CCCcEEEE--EcCHHHHH
Confidence 46899999999843 2345544 23357999999988888777665543 33 33 4443 2222 1 1
Q ss_pred cccc-CCCCcEEEEeeccccccccchhhhHHHHHH-hHccCCcEEEEEee
Q 041748 280 VNIR-KKKHETVAANLVFHLNTLKIYLKISDTLNL-VRSIKPTIVTLVEQ 327 (479)
Q Consensus 280 ~~L~-~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~-Ir~L~P~VvtlvE~ 327 (479)
..+. ...=+.|+++.. ......+|.. .+-|+|.-+++++.
T Consensus 129 ~~~~~~~~fD~V~~d~~--------~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 129 ESLGECPAFDLIFIDAD--------KPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp HTCCSCCCCSEEEECSC--------GGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred HhcCCCCCeEEEEECCc--------hHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 1121 112245655442 1122345544 47799998888753
No 150
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=38.20 E-value=65 Score=31.58 Aligned_cols=134 Identities=9% Similarity=0.092 Sum_probs=70.8
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVNI 282 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~L 282 (479)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+...++.+.+++...+..+.+-..+| +..+. +....
T Consensus 109 ~~~VLdIG~G~G~----~~~~l~~~-----~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~--~~~D~~~~l~~ 177 (314)
T 2b2c_A 109 PKRVLIIGGGDGG----ILREVLKH-----ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDL--FCGDGFEFLKN 177 (314)
T ss_dssp CCEEEEESCTTSH----HHHHHTTC-----TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEE--ECSCHHHHHHH
T ss_pred CCEEEEEcCCcCH----HHHHHHHc-----CCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEE--EEChHHHHHHh
Confidence 4589999999983 45556654 2457999999988888777776644322221012333 22222 11000
Q ss_pred cCCCCcEEEEeeccccccccchhhh--HHHHHHh-HccCCcEEEEEeecCCCCCCchhHHHHHHHHHHHHHhhhh
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLKI--SDTLNLV-RSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSL 354 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~~--~~~L~~I-r~L~P~VvtlvE~ea~~ns~~F~~RF~eaL~yYsalFDSL 354 (479)
.-..=++|++|... +....... ..+++.+ +.|+|.-+++++.+.... -...+.....+...+|...
T Consensus 178 ~~~~fD~Ii~d~~~---~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~~~l~~vF~~v 246 (314)
T 2b2c_A 178 HKNEFDVIITDSSD---PVGPAESLFGQSYYELLRDALKEDGILSSQGESVWL---HLPLIAHLVAFNRKIFPAV 246 (314)
T ss_dssp CTTCEEEEEECCC----------------HHHHHHHHEEEEEEEEEECCCTTT---CHHHHHHHHHHHHHHCSEE
T ss_pred cCCCceEEEEcCCC---CCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCccc---CHHHHHHHHHHHHHHCCcc
Confidence 11122567777642 22211111 4566655 679999888876432221 2344556666667777654
No 151
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=38.12 E-value=1.2e+02 Score=27.47 Aligned_cols=47 Identities=13% Similarity=0.017 Sum_probs=32.0
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVS 258 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~ 258 (479)
.-.|+|+|.|.|.. ...|+.+ .|+.-++|+|+.+...++.+.+++.+
T Consensus 61 ~~~VLdiG~G~G~~----~~~la~~----~~~~~~v~~vD~~~~~~~~a~~~~~~ 107 (239)
T 2hnk_A 61 AKRIIEIGTFTGYS----SLCFASA----LPEDGKILCCDVSEEWTNVARKYWKE 107 (239)
T ss_dssp CSEEEEECCTTCHH----HHHHHHH----SCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCHH----HHHHHHh----CCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 45799999998842 3344544 12245899999988878777766543
No 152
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=36.15 E-value=49 Score=30.40 Aligned_cols=48 Identities=15% Similarity=0.072 Sum_probs=33.4
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLV 257 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~ 257 (479)
+...|+|+|.|.| .+.-.|+.+- ..|..+||||+.+...++.+.+++.
T Consensus 51 ~~~~vLD~gcGsG----~~~~~la~~~---~~~~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 51 GPVTLWDPCCGSG----YLLTVLGLLH---RRSLRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp SCEEEEETTCTTS----HHHHHHHHHT---GGGEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCC----HHHHHHHHHh---ccCCCeEEEEECCHHHHHHHHHHHH
Confidence 4689999999999 3444444430 1135799999998887777776554
No 153
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=35.88 E-value=98 Score=28.46 Aligned_cols=96 Identities=15% Similarity=0.089 Sum_probs=52.7
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++.. + . |. ..+ ...+.
T Consensus 55 ~~~vLDiGcG~G~----~~~~l~~~---~----~~v~gvD~s~~~l~~a~~~~~------~-~---~~--~~d--~~~~~ 109 (260)
T 2avn_A 55 PCRVLDLGGGTGK----WSLFLQER---G----FEVVLVDPSKEMLEVAREKGV------K-N---VV--EAK--AEDLP 109 (260)
T ss_dssp CCEEEEETCTTCH----HHHHHHTT---T----CEEEEEESCHHHHHHHHHHTC------S-C---EE--ECC--TTSCC
T ss_pred CCeEEEeCCCcCH----HHHHHHHc---C----CeEEEEeCCHHHHHHHHhhcC------C-C---EE--ECc--HHHCC
Confidence 4689999999984 44556655 2 389999998877766554421 2 1 21 221 11222
Q ss_pred CCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 284 KKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 284 ~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
..++..=+|-+...++|+..+ ...+|+.+ +.|+|.-.+++.
T Consensus 110 ~~~~~fD~v~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 110 FPSGAFEAVLALGDVLSYVEN--KDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp SCTTCEEEEEECSSHHHHCSC--HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCEEEEEEcchhhhcccc--HHHHHHHHHHHcCCCeEEEEE
Confidence 333322122233334454322 45566655 568998766654
No 154
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=35.19 E-value=39 Score=29.54 Aligned_cols=45 Identities=18% Similarity=0.219 Sum_probs=25.3
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRL 256 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL 256 (479)
+.-+|+|+|.|.|. +...|+.+ . |..++|||+.+...++.+.+++
T Consensus 30 ~~~~vLDiG~G~G~----~~~~l~~~--~---~~~~v~~vD~~~~~~~~a~~~~ 74 (215)
T 4dzr_A 30 SGTRVIDVGTGSGC----IAVSIALA--C---PGVSVTAVDLSMDALAVARRNA 74 (215)
T ss_dssp TTEEEEEEESSBCH----HHHHHHHH--C---TTEEEEEEECC-----------
T ss_pred CCCEEEEecCCHhH----HHHHHHHh--C---CCCeEEEEECCHHHHHHHHHHH
Confidence 46899999999994 44555555 1 2479999998877666655544
No 155
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=34.84 E-value=47 Score=30.00 Aligned_cols=53 Identities=17% Similarity=0.286 Sum_probs=36.7
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSF 259 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~f 259 (479)
.-+|+|+|.|.|..-..|.+.+... +..+.-++|+|+.+.+.++.+.+++.+.
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~---~~~~~~~v~~vD~~~~~~~~a~~~~~~~ 137 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAK---GVDADTRIVGIEHQAELVRRSKANLNTD 137 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHS---CCCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHHHhcccc---cCCccCEEEEEEcCHHHHHHHHHHHHhc
Confidence 4589999999986544444433221 2334568999999988888888877654
No 156
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=34.03 E-value=94 Score=29.53 Aligned_cols=110 Identities=5% Similarity=0.069 Sum_probs=59.8
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhc-------CCeeEEEEEeecc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSF-------RNLVFEFQGLIRG 276 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~l-------gnvpFeF~~v~~~ 276 (479)
.-+|+|+|.|.| .+...++.+ |.-+||+|+.+...++.+.+++ +.+..+ .+-..+|. ..+
T Consensus 76 ~~~VLdiG~G~G----~~~~~l~~~------~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~--~~D 142 (281)
T 1mjf_A 76 PKRVLVIGGGDG----GTVREVLQH------DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLT--IGD 142 (281)
T ss_dssp CCEEEEEECTTS----HHHHHHTTS------CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEE--ESC
T ss_pred CCeEEEEcCCcC----HHHHHHHhC------CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEE--ECc
Confidence 458999999999 344555544 1358999999988888877776 442222 10123433 222
Q ss_pred c-eeccccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEeec
Q 041748 277 S-RLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQE 328 (479)
Q Consensus 277 ~-~l~~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~e 328 (479)
. +.... -..=++|+++....... ........+++.+ +.|+|.-++++...
T Consensus 143 ~~~~l~~-~~~fD~Ii~d~~~~~~~-~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 143 GFEFIKN-NRGFDVIIADSTDPVGP-AKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp HHHHHHH-CCCEEEEEEECCCCC------TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hHHHhcc-cCCeeEEEECCCCCCCc-chhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 2 11001 11225677776532211 0000124566655 67899988877643
No 157
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=33.77 E-value=70 Score=26.79 Aligned_cols=102 Identities=5% Similarity=-0.024 Sum_probs=57.9
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-e-ecc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-R-LVN 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~-l~~ 281 (479)
.-+|+|+|.|.|. +...|+.+ ++ . +|||+.+...++.+.+++.. .+ +..+| +..+. + +..
T Consensus 42 ~~~vLD~GcG~G~----~~~~l~~~----~~-~--v~~vD~~~~~~~~a~~~~~~----~~-~~~~~--~~~d~~~~~~~ 103 (171)
T 1ws6_A 42 RGRFLDPFAGSGA----VGLEAASE----GW-E--AVLVEKDPEAVRLLKENVRR----TG-LGARV--VALPVEVFLPE 103 (171)
T ss_dssp CCEEEEETCSSCH----HHHHHHHT----TC-E--EEEECCCHHHHHHHHHHHHH----HT-CCCEE--ECSCHHHHHHH
T ss_pred CCeEEEeCCCcCH----HHHHHHHC----CC-e--EEEEeCCHHHHHHHHHHHHH----cC-CceEE--EeccHHHHHHh
Confidence 3579999999993 44555655 22 3 99999988877777766543 33 33333 22322 1 111
Q ss_pred ccCC--CCcEEEEeeccccccccchhhhHHHHHHh---HccCCcEEEEEeecCC
Q 041748 282 IRKK--KHETVAANLVFHLNTLKIYLKISDTLNLV---RSIKPTIVTLVEQEGS 330 (479)
Q Consensus 282 L~~~--~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I---r~L~P~VvtlvE~ea~ 330 (479)
+... .=+.|+.|.++. +. ...++..+ +-|+|.-+++++....
T Consensus 104 ~~~~~~~~D~i~~~~~~~-~~------~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 104 AKAQGERFTVAFMAPPYA-MD------LAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp HHHTTCCEEEEEECCCTT-SC------TTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred hhccCCceEEEEECCCCc-hh------HHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 1111 224667776654 21 12344444 6699998877775544
No 158
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=33.19 E-value=81 Score=28.94 Aligned_cols=48 Identities=19% Similarity=0.304 Sum_probs=36.1
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSF 259 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~f 259 (479)
+.-.|+|+|.|.|. +...||.+ + |..++|||+.+...++.+.+++...
T Consensus 49 ~~~~vLDiGcG~G~----~~~~la~~----~-~~~~v~gvD~s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFGG----LMIDLSPA----F-PEDLILGMEIRVQVTNYVEDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTSH----HHHHHHHH----S-TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCH----HHHHHHHh----C-CCCCEEEEEcCHHHHHHHHHHHHHH
Confidence 45789999999994 44556665 1 2568999999988888887776654
No 159
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=33.19 E-value=45 Score=30.51 Aligned_cols=96 Identities=13% Similarity=0.090 Sum_probs=53.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee-EEEEEeeccceeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV-FEFQGLIRGSRLVNI 282 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp-FeF~~v~~~~~l~~L 282 (479)
.-+|+|+|.|.|.- ...||.+. |..++|||+.+...++.+.++.. ..| ++ .+|. ..+. ..+
T Consensus 71 ~~~vLDiG~G~G~~----~~~la~~~-----~~~~v~~vD~s~~~~~~a~~~~~----~~~-~~~v~~~--~~d~--~~~ 132 (240)
T 1xdz_A 71 VNTICDVGAGAGFP----SLPIKICF-----PHLHVTIVDSLNKRITFLEKLSE----ALQ-LENTTFC--HDRA--ETF 132 (240)
T ss_dssp CCEEEEECSSSCTT----HHHHHHHC-----TTCEEEEEESCHHHHHHHHHHHH----HHT-CSSEEEE--ESCH--HHH
T ss_pred CCEEEEecCCCCHH----HHHHHHhC-----CCCEEEEEeCCHHHHHHHHHHHH----HcC-CCCEEEE--eccH--HHh
Confidence 45899999999852 22344331 23589999998877776665543 334 42 4443 3322 111
Q ss_pred cCC---CC--cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RKK---KH--ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~~---~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
... ++ +.|+.+. + .....++..+ +-|+|.-.++..
T Consensus 133 ~~~~~~~~~fD~V~~~~------~---~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 133 GQRKDVRESYDIVTARA------V---ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp TTCTTTTTCEEEEEEEC------C---SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cccccccCCccEEEEec------c---CCHHHHHHHHHHhcCCCCEEEEE
Confidence 111 12 3333332 1 2345677766 678998776664
No 160
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=33.05 E-value=66 Score=27.15 Aligned_cols=95 Identities=8% Similarity=0.068 Sum_probs=54.0
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe-eEEEEEeeccceecc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL-VFEFQGLIRGSRLVN 281 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv-pFeF~~v~~~~~l~~ 281 (479)
+.-+|+|+|.|.|. +...|+.. ..++|||+.+...++.+.+++.. .| + ..+|. ..+..- .
T Consensus 35 ~~~~vLdiG~G~G~----~~~~l~~~-------~~~v~~vD~~~~~~~~a~~~~~~----~~-~~~~~~~--~~d~~~-~ 95 (183)
T 2yxd_A 35 KDDVVVDVGCGSGG----MTVEIAKR-------CKFVYAIDYLDGAIEVTKQNLAK----FN-IKNCQII--KGRAED-V 95 (183)
T ss_dssp TTCEEEEESCCCSH----HHHHHHTT-------SSEEEEEECSHHHHHHHHHHHHH----TT-CCSEEEE--ESCHHH-H
T ss_pred CCCEEEEeCCCCCH----HHHHHHhc-------CCeEEEEeCCHHHHHHHHHHHHH----cC-CCcEEEE--ECCccc-c
Confidence 34689999999995 33344432 35899999988877777766543 33 3 23332 222210 1
Q ss_pred ccCCCCcEEEEeeccccccccchhhhHHHHHHhHccCCcEEEEEe
Q 041748 282 IRKKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVE 326 (479)
Q Consensus 282 L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P~VvtlvE 326 (479)
+.-..=+.++.+.. .....+|..++++ |.-.++..
T Consensus 96 ~~~~~~D~i~~~~~---------~~~~~~l~~~~~~-~gG~l~~~ 130 (183)
T 2yxd_A 96 LDKLEFNKAFIGGT---------KNIEKIIEILDKK-KINHIVAN 130 (183)
T ss_dssp GGGCCCSEEEECSC---------SCHHHHHHHHHHT-TCCEEEEE
T ss_pred ccCCCCcEEEECCc---------ccHHHHHHHHhhC-CCCEEEEE
Confidence 11122245555544 2345778888887 76554443
No 161
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=32.95 E-value=1.1e+02 Score=26.87 Aligned_cols=74 Identities=18% Similarity=0.139 Sum_probs=44.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-+|+|+|.|.|. +...|+.+ + + -++|||+.+...++.+.+++ +..+ +..+|. ..+. ..+.
T Consensus 50 ~~~vlD~g~G~G~----~~~~l~~~---~-~--~~v~~vD~~~~~~~~a~~~~----~~~~-~~~~~~--~~d~--~~~~ 110 (207)
T 1wy7_A 50 GKVVADLGAGTGV----LSYGALLL---G-A--KEVICVEVDKEAVDVLIENL----GEFK-GKFKVF--IGDV--SEFN 110 (207)
T ss_dssp TCEEEEETCTTCH----HHHHHHHT---T-C--SEEEEEESCHHHHHHHHHHT----GGGT-TSEEEE--ESCG--GGCC
T ss_pred cCEEEEeeCCCCH----HHHHHHHc---C-C--CEEEEEECCHHHHHHHHHHH----HHcC-CCEEEE--ECch--HHcC
Confidence 4589999999995 44456655 1 1 27999999887777666554 3344 433432 3322 1121
Q ss_pred CCCCcEEEEeeccc
Q 041748 284 KKKHETVAANLVFH 297 (479)
Q Consensus 284 ~~~~EaLaVN~~~~ 297 (479)
..=++|+.|..+.
T Consensus 111 -~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 111 -SRVDIVIMNPPFG 123 (207)
T ss_dssp -CCCSEEEECCCCS
T ss_pred -CCCCEEEEcCCCc
Confidence 1235788887754
No 162
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=32.66 E-value=1.3e+02 Score=29.22 Aligned_cols=101 Identities=13% Similarity=0.010 Sum_probs=55.8
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee-EEEEEeeccceeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV-FEFQGLIRGSRLVNI 282 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp-FeF~~v~~~~~l~~L 282 (479)
.-.|+|.+.|.|. +.-.++.+. + |..+|+|++.+...++.+.+++.. .| ++ .+|. ..+..-...
T Consensus 204 ~~~vLD~gcGsG~----~~ie~a~~~---~-~~~~v~g~Di~~~~i~~a~~n~~~----~g-~~~i~~~--~~D~~~~~~ 268 (354)
T 3tma_A 204 GMRVLDPFTGSGT----IALEAASTL---G-PTSPVYAGDLDEKRLGLAREAALA----SG-LSWIRFL--RADARHLPR 268 (354)
T ss_dssp TCCEEESSCTTSH----HHHHHHHHH---C-TTSCEEEEESCHHHHHHHHHHHHH----TT-CTTCEEE--ECCGGGGGG
T ss_pred CCEEEeCCCCcCH----HHHHHHHhh---C-CCceEEEEECCHHHHHHHHHHHHH----cC-CCceEEE--eCChhhCcc
Confidence 4579999999993 444455541 1 347899999998888777766543 44 43 3332 222211111
Q ss_pred cCCCCcEEEEeeccccccccchhh----hHHHHHHh-HccCCc
Q 041748 283 RKKKHETVAANLVFHLNTLKIYLK----ISDTLNLV-RSIKPT 320 (479)
Q Consensus 283 ~~~~~EaLaVN~~~~Lh~L~~~~~----~~~~L~~I-r~L~P~ 320 (479)
....-++|+.|-.+.... .+... ...+++.+ +.|+|.
T Consensus 269 ~~~~~D~Ii~npPyg~r~-~~~~~~~~~~~~~~~~~~~~Lkpg 310 (354)
T 3tma_A 269 FFPEVDRILANPPHGLRL-GRKEGLFHLYWDFLRGALALLPPG 310 (354)
T ss_dssp TCCCCSEEEECCCSCC-----CHHHHHHHHHHHHHHHHTSCTT
T ss_pred ccCCCCEEEECCCCcCcc-CCcccHHHHHHHHHHHHHHhcCCC
Confidence 112226888898875432 21111 24566655 456773
No 163
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=32.23 E-value=53 Score=30.08 Aligned_cols=110 Identities=7% Similarity=0.009 Sum_probs=61.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVNI 282 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~L 282 (479)
.-.|+|+|.|.|. +...||.+. |..+++||+.+...++.+.+++.+. .+.| .+| +..+. ++..-
T Consensus 35 ~~~vLDiGcG~G~----~~~~lA~~~-----p~~~v~giD~s~~~l~~a~~~~~~~--~l~n--v~~--~~~Da~~~l~~ 99 (218)
T 3dxy_A 35 APVTLEIGFGMGA----SLVAMAKDR-----PEQDFLGIEVHSPGVGACLASAHEE--GLSN--LRV--MCHDAVEVLHK 99 (218)
T ss_dssp CCEEEEESCTTCH----HHHHHHHHC-----TTSEEEEECSCHHHHHHHHHHHHHT--TCSS--EEE--ECSCHHHHHHH
T ss_pred CCeEEEEeeeChH----HHHHHHHHC-----CCCeEEEEEecHHHHHHHHHHHHHh--CCCc--EEE--EECCHHHHHHH
Confidence 4579999999993 445566651 2468999999988887776654321 1223 333 33322 21110
Q ss_pred cCCCC--cEEEEeeccccccccchh---hhHHHHHHh-HccCCcEEEEEeec
Q 041748 283 RKKKH--ETVAANLVFHLNTLKIYL---KISDTLNLV-RSIKPTIVTLVEQE 328 (479)
Q Consensus 283 ~~~~~--EaLaVN~~~~Lh~L~~~~---~~~~~L~~I-r~L~P~VvtlvE~e 328 (479)
.+.++ +.|.+|+....++..... ....+|+.+ +.|+|.-++++.-+
T Consensus 100 ~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 100 MIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp HSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred HcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 12233 456666443333322211 113577777 55999988877643
No 164
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=31.78 E-value=2.9e+02 Score=27.18 Aligned_cols=92 Identities=11% Similarity=0.026 Sum_probs=54.2
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe-eEEEEEeeccceecc-
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL-VFEFQGLIRGSRLVN- 281 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv-pFeF~~v~~~~~l~~- 281 (479)
.-.|+|+| |.|. +...|+.+ + |..++|+|+.+...++.+.+++.+ .| + ..+| +..+. ..
T Consensus 173 ~~~VLDlG-G~G~----~~~~la~~----~-~~~~v~~vDi~~~~l~~a~~~~~~----~g-~~~v~~--~~~D~--~~~ 233 (373)
T 2qm3_A 173 NKDIFVLG-DDDL----TSIALMLS----G-LPKRIAVLDIDERLTKFIEKAANE----IG-YEDIEI--FTFDL--RKP 233 (373)
T ss_dssp TCEEEEES-CTTC----HHHHHHHH----T-CCSEEEEECSCHHHHHHHHHHHHH----HT-CCCEEE--ECCCT--TSC
T ss_pred CCEEEEEC-CCCH----HHHHHHHh----C-CCCEEEEEECCHHHHHHHHHHHHH----cC-CCCEEE--EEChh--hhh
Confidence 35899999 8884 22344554 1 235899999988888877776544 34 4 2333 33332 11
Q ss_pred ccC---CCCcEEEEeeccccccccchhhhHHHHHHh-HccCCc
Q 041748 282 IRK---KKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPT 320 (479)
Q Consensus 282 L~~---~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~ 320 (479)
+.. ..=++|++|.++.... ...+|+.+ +.|+|.
T Consensus 234 l~~~~~~~fD~Vi~~~p~~~~~------~~~~l~~~~~~Lkpg 270 (373)
T 2qm3_A 234 LPDYALHKFDTFITDPPETLEA------IRAFVGRGIATLKGP 270 (373)
T ss_dssp CCTTTSSCBSEEEECCCSSHHH------HHHHHHHHHHTBCST
T ss_pred chhhccCCccEEEECCCCchHH------HHHHHHHHHHHcccC
Confidence 211 1226888888764321 35666655 678994
No 165
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=30.79 E-value=86 Score=26.56 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=32.7
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVS 258 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~ 258 (479)
+.-+|+|+|.|.|. +...|+.+ + .++|+++.+...++.+.+++..
T Consensus 33 ~~~~vldiG~G~G~----~~~~l~~~---~----~~v~~~D~~~~~~~~a~~~~~~ 77 (192)
T 1l3i_A 33 KNDVAVDVGCGTGG----VTLELAGR---V----RRVYAIDRNPEAISTTEMNLQR 77 (192)
T ss_dssp TTCEEEEESCTTSH----HHHHHHTT---S----SEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCH----HHHHHHHh---c----CEEEEEECCHHHHHHHHHHHHH
Confidence 35689999999883 34455655 2 5899999988878777766543
No 166
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=30.15 E-value=1.6e+02 Score=28.63 Aligned_cols=104 Identities=15% Similarity=0.227 Sum_probs=55.1
Q ss_pred cCCCccchh-hhhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHH
Q 041748 175 VSPYFQLAH-FTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETE 253 (479)
Q Consensus 175 ~sP~~kfah-~tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg 253 (479)
+.|=-++++ |..++.|++.+-.... ..+.-+|+|+|.|.|. |-..|+.+ + -++|+|+.+.+.++.+.
T Consensus 22 ~~~~k~~GQnfL~d~~i~~~Iv~~l~-~~~~~~VLEIG~G~G~----lT~~La~~---~----~~V~aVEid~~li~~a~ 89 (295)
T 3gru_A 22 FKPKKKLGQCFLIDKNFVNKAVESAN-LTKDDVVLEIGLGKGI----LTEELAKN---A----KKVYVIEIDKSLEPYAN 89 (295)
T ss_dssp --------CCEECCHHHHHHHHHHTT-CCTTCEEEEECCTTSH----HHHHHHHH---S----SEEEEEESCGGGHHHHH
T ss_pred CCCccccCccccCCHHHHHHHHHhcC-CCCcCEEEEECCCchH----HHHHHHhc---C----CEEEEEECCHHHHHHHH
Confidence 455556665 6667766666543210 0134589999999995 45556655 1 37899998887777776
Q ss_pred HHHHHHHhhcCCeeEEEEEeeccceeccccCCCCcEEEEeecccc
Q 041748 254 NRLVSFSKSFRNLVFEFQGLIRGSRLVNIRKKKHETVAANLVFHL 298 (479)
Q Consensus 254 ~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~~~~~EaLaVN~~~~L 298 (479)
+++. ..+|+ +| +..+..-..+.-.+-++|+.|..++.
T Consensus 90 ~~~~----~~~~v--~v--i~gD~l~~~~~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 90 KLKE----LYNNI--EI--IWGDALKVDLNKLDFNKVVANLPYQI 126 (295)
T ss_dssp HHHH----HCSSE--EE--EESCTTTSCGGGSCCSEEEEECCGGG
T ss_pred HHhc----cCCCe--EE--EECchhhCCcccCCccEEEEeCcccc
Confidence 6654 33433 33 23332111111112357888877653
No 167
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=29.99 E-value=2.2e+02 Score=26.58 Aligned_cols=100 Identities=11% Similarity=0.037 Sum_probs=53.1
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-eeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RLVNI 282 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l~~L 282 (479)
.=+|+|+|.+.|. |...+-.+... .=+|+||+.+...+++ |.+.|+...||.+. ..+. .....
T Consensus 77 g~~VLDlG~GtG~-~t~~la~~v~~-------~G~V~avD~s~~~l~~----l~~~a~~r~nv~~i----~~Da~~~~~~ 140 (232)
T 3id6_C 77 GTKVLYLGAASGT-TISHVSDIIEL-------NGKAYGVEFSPRVVRE----LLLVAQRRPNIFPL----LADARFPQSY 140 (232)
T ss_dssp TCEEEEETCTTSH-HHHHHHHHHTT-------TSEEEEEECCHHHHHH----HHHHHHHCTTEEEE----ECCTTCGGGT
T ss_pred CCEEEEEeecCCH-HHHHHHHHhCC-------CCEEEEEECcHHHHHH----HHHHhhhcCCeEEE----Ecccccchhh
Confidence 4579999999996 55555444322 2389999987765433 33445544455442 2222 11111
Q ss_pred c-C-CCCcEEEEeeccccccccchhhhHHHHHHhH-ccCCcEEEEEe
Q 041748 283 R-K-KKHETVAANLVFHLNTLKIYLKISDTLNLVR-SIKPTIVTLVE 326 (479)
Q Consensus 283 ~-~-~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir-~L~P~VvtlvE 326 (479)
. + .+=+++.+|..+ ++ ....++..++ -|+|.-..+..
T Consensus 141 ~~~~~~~D~I~~d~a~-----~~--~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 141 KSVVENVDVLYVDIAQ-----PD--QTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp TTTCCCEEEEEECCCC-----TT--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred hccccceEEEEecCCC-----hh--HHHHHHHHHHHhCCCCeEEEEE
Confidence 1 1 122455555432 11 2233455555 79997766554
No 168
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=29.46 E-value=2.1e+02 Score=29.02 Aligned_cols=97 Identities=11% Similarity=0.114 Sum_probs=58.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee-EEEEEeeccc-e-ec
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV-FEFQGLIRGS-R-LV 280 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp-FeF~~v~~~~-~-l~ 280 (479)
.-.|+|+|.|.|.- ...||.+ .-++|||+.+.+.++.+.+++. ..| ++ .+|. ..+. + +.
T Consensus 287 ~~~VLDlgcG~G~~----~~~la~~-------~~~V~gvD~s~~al~~A~~n~~----~~~-~~~v~f~--~~d~~~~l~ 348 (433)
T 1uwv_A 287 EDRVLDLFCGMGNF----TLPLATQ-------AASVVGVEGVPALVEKGQQNAR----LNG-LQNVTFY--HENLEEDVT 348 (433)
T ss_dssp TCEEEEESCTTTTT----HHHHHTT-------SSEEEEEESCHHHHHHHHHHHH----HTT-CCSEEEE--ECCTTSCCS
T ss_pred CCEEEECCCCCCHH----HHHHHhh-------CCEEEEEeCCHHHHHHHHHHHH----HcC-CCceEEE--ECCHHHHhh
Confidence 35799999999943 3345554 1379999999888887776653 333 43 4443 2222 1 11
Q ss_pred cc--cCCCCcEEEEeeccccccccchhhhHHHHHHhHccCCcEEEEEe
Q 041748 281 NI--RKKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVE 326 (479)
Q Consensus 281 ~L--~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P~VvtlvE 326 (479)
.+ .-..=++|++|-... ....+++.+..++|.-++.+.
T Consensus 349 ~~~~~~~~fD~Vv~dPPr~--------g~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 349 KQPWAKNGFDKVLLDPARA--------GAAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp SSGGGTTCCSEEEECCCTT--------CCHHHHHHHHHHCCSEEEEEE
T ss_pred hhhhhcCCCCEEEECCCCc--------cHHHHHHHHHhcCCCeEEEEE
Confidence 11 111225677664421 123678888889999887774
No 169
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=29.13 E-value=63 Score=28.93 Aligned_cols=65 Identities=11% Similarity=0.068 Sum_probs=40.0
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHH
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSF 259 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~f 259 (479)
..+++.+.... .+.-+|+|+|.|.|..-. .|+..-.....|..++|+|+.+.+.++.+.+++.+.
T Consensus 68 ~~~~~~l~~~~---~~~~~VLdiG~G~G~~~~----~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~ 132 (227)
T 2pbf_A 68 ALSLKRLINVL---KPGSRAIDVGSGSGYLTV----CMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRD 132 (227)
T ss_dssp HHHHHHHTTTS---CTTCEEEEESCTTSHHHH----HHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhC---CCCCEEEEECCCCCHHHH----HHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 35566664211 234689999999985333 344331000124569999999988888887776654
No 170
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=27.64 E-value=67 Score=28.29 Aligned_cols=39 Identities=18% Similarity=0.086 Sum_probs=31.9
Q ss_pred CCccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCCC
Q 041748 89 KGLHLIHLLLITATAADENNVSLALENLTELYQTVSLTGD 128 (479)
Q Consensus 89 ~g~~L~~LLl~CA~AV~~gd~~~A~~~L~~L~~~aS~~Gd 128 (479)
..-++.+-|-+|+++++.||...|+.||..-. ..-|+||
T Consensus 54 Gr~EIW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gd 92 (137)
T 2ksn_A 54 GRKEIWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGA 92 (137)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCC
T ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCc
Confidence 33468899999999999999999999887553 4467887
No 171
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=27.62 E-value=2.2e+02 Score=25.68 Aligned_cols=47 Identities=11% Similarity=0.070 Sum_probs=31.5
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVS 258 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~ 258 (479)
.-.|+|+|.+.|. ....|+.. -|+.-+||+|+.+...++.+.+++.+
T Consensus 73 ~~~vLdiG~G~G~----~~~~la~~----~~~~~~v~~iD~~~~~~~~a~~~~~~ 119 (232)
T 3cbg_A 73 AKQVLEIGVFRGY----SALAMALQ----LPPDGQIIACDQDPNATAIAKKYWQK 119 (232)
T ss_dssp CCEEEEECCTTSH----HHHHHHTT----SCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCCCH----HHHHHHHh----CCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 3489999999883 22334443 12246899999988877777666543
No 172
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=27.13 E-value=1.7e+02 Score=27.14 Aligned_cols=101 Identities=9% Similarity=0.008 Sum_probs=54.0
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe--eEEEEEeeccc-ee-
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL--VFEFQGLIRGS-RL- 279 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv--pFeF~~v~~~~-~l- 279 (479)
.-+|+|+|.+.|.-=. .|+..- |+.-+||+|+.+...++.+.+++.+ .| + ..+|. ..+. +.
T Consensus 80 ~~~VLeiG~G~G~~~~----~la~~~----~~~~~v~~iD~s~~~~~~a~~~~~~----~g-~~~~i~~~--~gda~~~l 144 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLL----ATALAI----PEDGKILAMDINKENYELGLPVIKK----AG-VDHKIDFR--EGPALPVL 144 (247)
T ss_dssp CCEEEEECCGGGHHHH----HHHHHS----CTTCEEEEEESCCHHHHHHHHHHHH----TT-CGGGEEEE--ESCHHHHH
T ss_pred cCEEEEeCCCcCHHHH----HHHHhC----CCCCEEEEEECCHHHHHHHHHHHHH----cC-CCCCeEEE--ECCHHHHH
Confidence 4589999999885322 233331 2235899999888777666655543 34 4 24443 2222 11
Q ss_pred cccc-----CCCCcEEEEeeccccccccchhhhHHHHH-HhHccCCcEEEEEee
Q 041748 280 VNIR-----KKKHETVAANLVFHLNTLKIYLKISDTLN-LVRSIKPTIVTLVEQ 327 (479)
Q Consensus 280 ~~L~-----~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~-~Ir~L~P~VvtlvE~ 327 (479)
..+. ..+=+.++++... .....+|. ..+-|+|.-+++++.
T Consensus 145 ~~l~~~~~~~~~fD~V~~d~~~--------~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 145 DEMIKDEKNHGSYDFIFVDADK--------DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HHHHHSGGGTTCBSEEEECSCS--------TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred HHHHhccCCCCCEEEEEEcCch--------HHHHHHHHHHHHhCCCCeEEEEec
Confidence 1110 1222455555321 12234443 346789998887764
No 173
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=26.75 E-value=1.3e+02 Score=31.04 Aligned_cols=106 Identities=10% Similarity=0.046 Sum_probs=55.0
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHH---HHHHHhhcCCee---EEEEEeecc
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENR---LVSFSKSFRNLV---FEFQGLIRG 276 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~r---L~~fA~~lgnvp---FeF~~v~~~ 276 (479)
..-.|+|+|.|.|.+- -.||.+. + ..+++||+.+...++.+... +.+-++.+| +. ++|. ..+
T Consensus 242 ~g~~VLDLGCGsG~la----~~LA~~~--g---~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G-l~~~nV~~i--~gD 309 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCV----VQAALEC--G---CALSFGCEIMDDASDLTILQYEELKKRCKLYG-MRLNNVEFS--LKK 309 (433)
T ss_dssp TTCEEEEESCTTSHHH----HHHHHHH--C---CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT-BCCCCEEEE--ESS
T ss_pred CCCEEEEeCCCcCHHH----HHHHHHC--C---CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC-CCCCceEEE--EcC
Confidence 3457999999999543 3355541 1 24899999887766655222 233334444 32 3332 211
Q ss_pred -c-eeccc--cCCCCcEEEEeeccccccccchhhhHHHH-HHhHccCCcEEEEEe
Q 041748 277 -S-RLVNI--RKKKHETVAANLVFHLNTLKIYLKISDTL-NLVRSIKPTIVTLVE 326 (479)
Q Consensus 277 -~-~l~~L--~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L-~~Ir~L~P~VvtlvE 326 (479)
. ....+ ...+=++|++|..+ + . .....+| ...+.|+|.-.+++-
T Consensus 310 ~~~~~~~~~~~~~~FDvIvvn~~l--~-~---~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 310 SFVDNNRVAELIPQCDVILVNNFL--F-D---EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTT--C-C---HHHHHHHHHHHTTCCTTCEEEES
T ss_pred ccccccccccccCCCCEEEEeCcc--c-c---ccHHHHHHHHHHhCCCCeEEEEe
Confidence 1 10011 01233577777543 1 1 1222333 455789998766554
No 174
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=26.72 E-value=68 Score=30.67 Aligned_cols=62 Identities=16% Similarity=0.191 Sum_probs=38.1
Q ss_pred hhhhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHH
Q 041748 183 HFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRL 256 (479)
Q Consensus 183 h~tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL 256 (479)
||..|+.|++.+..... ..+.-+|+|+|.|.|.- ...|+.+ +. ++|||+.+...++.+.+++
T Consensus 9 ~fl~d~~i~~~i~~~~~-~~~~~~VLDiG~G~G~l----t~~L~~~---~~----~v~~vD~~~~~~~~a~~~~ 70 (285)
T 1zq9_A 9 HILKNPLIINSIIDKAA-LRPTDVVLEVGPGTGNM----TVKLLEK---AK----KVVACELDPRLVAELHKRV 70 (285)
T ss_dssp CEECCHHHHHHHHHHTC-CCTTCEEEEECCTTSTT----HHHHHHH---SS----EEEEEESCHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHhcC-CCCCCEEEEEcCcccHH----HHHHHhh---CC----EEEEEECCHHHHHHHHHHH
Confidence 34445555555432210 01345899999999954 3445555 21 7999999887776666554
No 175
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=26.70 E-value=66 Score=29.97 Aligned_cols=62 Identities=16% Similarity=0.225 Sum_probs=40.6
Q ss_pred hhhhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHH
Q 041748 183 HFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRL 256 (479)
Q Consensus 183 h~tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL 256 (479)
||..++.|++.+-.... ....-+|+|+|.|.|. +...|+.+ + -++|||+.+.+.++.+.+++
T Consensus 11 ~fl~d~~~~~~i~~~~~-~~~~~~VLDiG~G~G~----lt~~l~~~---~----~~v~~vD~~~~~~~~a~~~~ 72 (244)
T 1qam_A 11 NFITSKHNIDKIMTNIR-LNEHDNIFEIGSGKGH----FTLELVQR---C----NFVTAIEIDHKLCKTTENKL 72 (244)
T ss_dssp CBCCCHHHHHHHHTTCC-CCTTCEEEEECCTTSH----HHHHHHHH---S----SEEEEECSCHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHhCC-CCCCCEEEEEeCCchH----HHHHHHHc---C----CeEEEEECCHHHHHHHHHhh
Confidence 45556666666643210 0134589999999994 55667776 2 47999999887776665554
No 176
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=26.60 E-value=2e+02 Score=25.45 Aligned_cols=88 Identities=15% Similarity=0.046 Sum_probs=49.0
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-.|+|+|.|.|. +...|+.+ ||++.+...++.+.++ + +.|. ..+ ...+.
T Consensus 48 ~~~vLDiG~G~G~----~~~~l~~~-----------~~vD~s~~~~~~a~~~--------~-~~~~----~~d--~~~~~ 97 (219)
T 1vlm_A 48 EGRGVEIGVGTGR----FAVPLKIK-----------IGVEPSERMAEIARKR--------G-VFVL----KGT--AENLP 97 (219)
T ss_dssp SSCEEEETCTTST----THHHHTCC-----------EEEESCHHHHHHHHHT--------T-CEEE----ECB--TTBCC
T ss_pred CCcEEEeCCCCCH----HHHHHHHH-----------hccCCCHHHHHHHHhc--------C-CEEE----Ecc--cccCC
Confidence 3579999999984 22334432 9999887766555443 4 5432 111 11222
Q ss_pred CCCC--cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 284 KKKH--ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 284 ~~~~--EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
..++ +.|+.+ ..|||+.+. ..+|+.+ +.|+|.-.+++.
T Consensus 98 ~~~~~fD~v~~~--~~l~~~~~~---~~~l~~~~~~L~pgG~l~i~ 138 (219)
T 1vlm_A 98 LKDESFDFALMV--TTICFVDDP---ERALKEAYRILKKGGYLIVG 138 (219)
T ss_dssp SCTTCEEEEEEE--SCGGGSSCH---HHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCeeEEEEc--chHhhccCH---HHHHHHHHHHcCCCcEEEEE
Confidence 3333 334333 457887542 4566555 568997665554
No 177
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=26.53 E-value=1.2e+02 Score=26.51 Aligned_cols=96 Identities=10% Similarity=-0.023 Sum_probs=53.0
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee-EEEEEeeccceeccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV-FEFQGLIRGSRLVNI 282 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp-FeF~~v~~~~~l~~L 282 (479)
.-+|+|+|.|.|.--. .|+.+. |..++|+|+.+...++.+.+++. ..+ ++ .+|. ..+. ..+
T Consensus 66 ~~~vLDiG~G~G~~~~----~l~~~~-----~~~~v~~vD~s~~~~~~a~~~~~----~~~-~~~v~~~--~~d~--~~~ 127 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGI----PLSIVR-----PEAHFTLLDSLGKRVRFLRQVQH----ELK-LENIEPV--QSRV--EEF 127 (207)
T ss_dssp SSEEEEETCTTTTTHH----HHHHHC-----TTSEEEEEESCHHHHHHHHHHHH----HTT-CSSEEEE--ECCT--TTS
T ss_pred CCeEEEECCCCCHHHH----HHHHHC-----CCCEEEEEeCCHHHHHHHHHHHH----HcC-CCCeEEE--ecch--hhC
Confidence 3589999999995433 344431 23589999998877776665544 334 43 4443 2222 111
Q ss_pred cC-CCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEe
Q 041748 283 RK-KKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVE 326 (479)
Q Consensus 283 ~~-~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE 326 (479)
.. ..=+.++.|. ++ ....+|..+ +.|+|.-.++++
T Consensus 128 ~~~~~~D~i~~~~---~~------~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 128 PSEPPFDGVISRA---FA------SLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp CCCSCEEEEECSC---SS------SHHHHHHHHTTSEEEEEEEEEE
T ss_pred CccCCcCEEEEec---cC------CHHHHHHHHHHhcCCCcEEEEE
Confidence 11 1113333332 11 234566655 568998777776
No 178
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=26.41 E-value=93 Score=27.53 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=54.6
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe--eEEEEEeeccc-eec
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL--VFEFQGLIRGS-RLV 280 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv--pFeF~~v~~~~-~l~ 280 (479)
.-+|+|+|.+.|. ....|+.+- |+.-+||+|+.+...++.+.+++... + + ..+|. ..+. +.
T Consensus 57 ~~~vLdiG~G~G~----~~~~la~~~----~~~~~v~~vD~~~~~~~~a~~~~~~~----~-~~~~v~~~--~~d~~~~- 120 (210)
T 3c3p_A 57 PQLVVVPGDGLGC----ASWWFARAI----SISSRVVMIDPDRDNVEHARRMLHDN----G-LIDRVELQ--VGDPLGI- 120 (210)
T ss_dssp CSEEEEESCGGGH----HHHHHHTTS----CTTCEEEEEESCHHHHHHHHHHHHHH----S-GGGGEEEE--ESCHHHH-
T ss_pred CCEEEEEcCCccH----HHHHHHHhC----CCCCEEEEEECCHHHHHHHHHHHHHC----C-CCceEEEE--EecHHHH-
Confidence 3589999999884 223355441 22468999999888887777665532 3 3 23443 2222 11
Q ss_pred cccCCCC-cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 281 NIRKKKH-ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 281 ~L~~~~~-EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
+...++ +.++++.. ......+|+.+ +.|+|.-+++++.
T Consensus 121 -~~~~~~fD~v~~~~~--------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 121 -AAGQRDIDILFMDCD--------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp -HTTCCSEEEEEEETT--------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred -hccCCCCCEEEEcCC--------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 111112 34444421 11233555544 6799998888753
No 179
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=25.92 E-value=1.5e+02 Score=29.40 Aligned_cols=109 Identities=6% Similarity=0.032 Sum_probs=59.9
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccc-ee-c
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGS-RL-V 280 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~-~l-~ 280 (479)
+.++|+|+|.|.| .+...|+.+. |..+||+|+-+...++.+.+++.. ..+-..+|. ..+. +. .
T Consensus 89 ~~~rVLdIG~G~G----~la~~la~~~-----p~~~v~~VEidp~vi~~Ar~~~~~----~~~~rv~v~--~~Da~~~l~ 153 (317)
T 3gjy_A 89 SKLRITHLGGGAC----TMARYFADVY-----PQSRNTVVELDAELARLSREWFDI----PRAPRVKIR--VDDARMVAE 153 (317)
T ss_dssp GGCEEEEESCGGG----HHHHHHHHHS-----TTCEEEEEESCHHHHHHHHHHSCC----CCTTTEEEE--ESCHHHHHH
T ss_pred CCCEEEEEECCcC----HHHHHHHHHC-----CCcEEEEEECCHHHHHHHHHhccc----cCCCceEEE--ECcHHHHHh
Confidence 4689999999998 5666777641 235899999888766666554321 000113332 2222 11 1
Q ss_pred cccCCCCcEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 281 NIRKKKHETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 281 ~L~~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
.+.-..=++|++++.... ..........|++.+ +.|+|.-++++--
T Consensus 154 ~~~~~~fDvIi~D~~~~~-~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 154 SFTPASRDVIIRDVFAGA-ITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp TCCTTCEEEEEECCSTTS-CCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCCEEEECCCCcc-ccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 111122367777764332 111111124677766 5799998876654
No 180
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=25.86 E-value=4.1e+02 Score=24.78 Aligned_cols=43 Identities=12% Similarity=0.168 Sum_probs=30.2
Q ss_pred eEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHH
Q 041748 205 LHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLV 257 (479)
Q Consensus 205 VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~ 257 (479)
-.|+|+|.|.|. +-..+|.+ + +. ++|||+.+...++.+.+++.
T Consensus 127 ~~VLDlgcG~G~----~~~~la~~---~-~~--~V~~vD~s~~~~~~a~~n~~ 169 (278)
T 2frn_A 127 ELVVDMFAGIGH----LSLPIAVY---G-KA--KVIAIEKDPYTFKFLVENIH 169 (278)
T ss_dssp CEEEETTCTTTT----THHHHHHH---T-CC--EEEEECCCHHHHHHHHHHHH
T ss_pred CEEEEecccCCH----HHHHHHHh---C-CC--EEEEEECCHHHHHHHHHHHH
Confidence 579999999994 23344554 2 22 89999999888877766543
No 181
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=25.58 E-value=1.5e+02 Score=29.36 Aligned_cols=104 Identities=14% Similarity=0.140 Sum_probs=59.0
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe--eEEEEEeeccceec
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL--VFEFQGLIRGSRLV 280 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv--pFeF~~v~~~~~l~ 280 (479)
..-.|+|.|.|.|. +.-.++.+ +. .-+|+|++.+...++.+.+++.. .| + ..+|.. .+. .
T Consensus 217 ~~~~vLD~gCGsG~----~~i~~a~~---~~--~~~v~g~Dis~~~l~~A~~n~~~----~g-l~~~i~~~~--~D~--~ 278 (373)
T 3tm4_A 217 DGGSVLDPMCGSGT----ILIELALR---RY--SGEIIGIEKYRKHLIGAEMNALA----AG-VLDKIKFIQ--GDA--T 278 (373)
T ss_dssp CSCCEEETTCTTCH----HHHHHHHT---TC--CSCEEEEESCHHHHHHHHHHHHH----TT-CGGGCEEEE--CCG--G
T ss_pred CCCEEEEccCcCcH----HHHHHHHh---CC--CCeEEEEeCCHHHHHHHHHHHHH----cC-CCCceEEEE--CCh--h
Confidence 34679999999993 44455555 11 23799999998888888777543 34 4 344432 222 1
Q ss_pred cccC--CCCcEEEEeeccccccccchh---h-hHHHHHHhHc-cCCcEEEEE
Q 041748 281 NIRK--KKHETVAANLVFHLNTLKIYL---K-ISDTLNLVRS-IKPTIVTLV 325 (479)
Q Consensus 281 ~L~~--~~~EaLaVN~~~~Lh~L~~~~---~-~~~~L~~Ir~-L~P~Vvtlv 325 (479)
.+.. ..=++|+.|-.+... +.+.. . ...+++.++. |++.+++++
T Consensus 279 ~~~~~~~~fD~Ii~npPyg~r-~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 279 QLSQYVDSVDFAISNLPYGLK-IGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp GGGGTCSCEEEEEEECCCC-------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hCCcccCCcCEEEECCCCCcc-cCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 1222 233678888887542 22111 1 2456666665 666666665
No 182
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=25.49 E-value=5.4e+02 Score=26.03 Aligned_cols=96 Identities=17% Similarity=0.239 Sum_probs=59.0
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceecccc
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIR 283 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~ 283 (479)
.-.|+|+|.|.|. +...||.+ + -+++||+.+.+.++.+.+++. ..| ++.+|. ..+.. .+.
T Consensus 291 ~~~VLDlgcG~G~----~sl~la~~---~----~~V~gvD~s~~ai~~A~~n~~----~ng-l~v~~~--~~d~~--~~~ 350 (425)
T 2jjq_A 291 GEKILDMYSGVGT----FGIYLAKR---G----FNVKGFDSNEFAIEMARRNVE----INN-VDAEFE--VASDR--EVS 350 (425)
T ss_dssp SSEEEEETCTTTH----HHHHHHHT---T----CEEEEEESCHHHHHHHHHHHH----HHT-CCEEEE--ECCTT--TCC
T ss_pred CCEEEEeeccchH----HHHHHHHc---C----CEEEEEECCHHHHHHHHHHHH----HcC-CcEEEE--ECChH--HcC
Confidence 4579999999984 33345654 1 289999999888877776543 334 664443 33221 110
Q ss_pred CCCCcEEEEeeccccccccchhhhHHHHHHhHccCCcEEEEEe
Q 041748 284 KKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVE 326 (479)
Q Consensus 284 ~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~~Ir~L~P~VvtlvE 326 (479)
...=++|++|-.. ......++..++.|+|.-++.+.
T Consensus 351 ~~~fD~Vv~dPPr-------~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 351 VKGFDTVIVDPPR-------AGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp CTTCSEEEECCCT-------TCSCHHHHHHHHHHCCSEEEEEE
T ss_pred ccCCCEEEEcCCc-------cchHHHHHHHHHhcCCCcEEEEE
Confidence 1122567665442 11224688888899999888875
No 183
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=25.33 E-value=69 Score=29.98 Aligned_cols=112 Identities=12% Similarity=-0.008 Sum_probs=60.7
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCee--EEEEEeeccc-ee
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLV--FEFQGLIRGS-RL 279 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvp--FeF~~v~~~~-~l 279 (479)
+.-+|+|+|.|.|. +...|+.+ . |..+||||+.+...++.+.+++...+. .+ ++ .+|. ..+. +.
T Consensus 36 ~~~~VLDlG~G~G~----~~l~la~~--~---~~~~v~gvDi~~~~~~~a~~n~~~~~~-~~-l~~~v~~~--~~D~~~~ 102 (260)
T 2ozv_A 36 RACRIADLGAGAGA----AGMAVAAR--L---EKAEVTLYERSQEMAEFARRSLELPDN-AA-FSARIEVL--EADVTLR 102 (260)
T ss_dssp SCEEEEECCSSSSH----HHHHHHHH--C---TTEEEEEEESSHHHHHHHHHHTTSGGG-TT-TGGGEEEE--ECCTTCC
T ss_pred CCCEEEEeCChHhH----HHHHHHHh--C---CCCeEEEEECCHHHHHHHHHHHHhhhh-CC-CcceEEEE--eCCHHHH
Confidence 35689999999994 34456666 1 247999999988877777766543211 23 33 4443 3322 11
Q ss_pred cc------ccCCCCcEEEEeecccccc--c-----------cchhhhHHHHHHh-HccCCcEEEEEee
Q 041748 280 VN------IRKKKHETVAANLVFHLNT--L-----------KIYLKISDTLNLV-RSIKPTIVTLVEQ 327 (479)
Q Consensus 280 ~~------L~~~~~EaLaVN~~~~Lh~--L-----------~~~~~~~~~L~~I-r~L~P~VvtlvE~ 327 (479)
.. +....=+.|+.|-.+.... . ........+|+.+ +-|+|.-.+++..
T Consensus 103 ~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 103 AKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 00 1112225777776554320 0 0011245566654 5689987766653
No 184
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=24.96 E-value=2.4e+02 Score=25.65 Aligned_cols=47 Identities=15% Similarity=-0.002 Sum_probs=30.9
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVS 258 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~ 258 (479)
.-+|+|+|.+.|.-=.. |+.. -|+.-+||+|+.+...++.+.+++.+
T Consensus 71 ~~~VLeiG~G~G~~~~~----la~~----~~~~~~v~~iD~~~~~~~~a~~~~~~ 117 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLL----TALS----IPDDGKITAIDFDREAYEIGLPFIRK 117 (237)
T ss_dssp CCEEEEECCTTSHHHHH----HHHH----SCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHH----HHHh----CCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 45899999999843222 3332 12236899999988877776665543
No 185
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=24.87 E-value=73 Score=29.06 Aligned_cols=49 Identities=10% Similarity=-0.002 Sum_probs=34.1
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSF 259 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~f 259 (479)
+.-+|+|+|.|.|. +...|+.+- .|..++|+++.+.+.++.+.+++..+
T Consensus 93 ~~~~vldiG~G~G~----~~~~l~~~~----~~~~~v~~~D~~~~~~~~a~~~~~~~ 141 (255)
T 3mb5_A 93 PGDFIVEAGVGSGA----LTLFLANIV----GPEGRVVSYEIREDFAKLAWENIKWA 141 (255)
T ss_dssp TTCEEEEECCTTSH----HHHHHHHHH----CTTSEEEEECSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchH----HHHHHHHHh----CCCeEEEEEecCHHHHHHHHHHHHHc
Confidence 35689999999983 344445441 12468999999988888777766544
No 186
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=24.71 E-value=1.5e+02 Score=26.62 Aligned_cols=43 Identities=14% Similarity=0.067 Sum_probs=32.0
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLV 257 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~ 257 (479)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++.
T Consensus 79 ~~~vLD~gcG~G~----~~~~la~~---~----~~v~~vD~s~~~~~~a~~~~~ 121 (241)
T 3gdh_A 79 CDVVVDAFCGVGG----NTIQFALT---G----MRVIAIDIDPVKIALARNNAE 121 (241)
T ss_dssp CSEEEETTCTTSH----HHHHHHHT---T----CEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEECccccCH----HHHHHHHc---C----CEEEEEECCHHHHHHHHHHHH
Confidence 5689999999993 44455554 2 589999999888877766654
No 187
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=24.61 E-value=1.1e+02 Score=29.63 Aligned_cols=73 Identities=11% Similarity=0.042 Sum_probs=50.2
Q ss_pred cCCCccchhhhhHHHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHH
Q 041748 175 VSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETEN 254 (479)
Q Consensus 175 ~sP~~kfah~tANqAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~ 254 (479)
+-+=.++.|-+....|++.+.-. +.-.|+|+|.|.|. +...|+.. .+ |.-++++|+.+...++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~~-----~g~~VLDiG~G~G~----~~~~la~~---~g-~~~~v~~vD~~~~~~~~a~~ 148 (336)
T 2b25_A 82 MKRGTAITFPKDINMILSMMDIN-----PGDTVLEAGSGSGG----MSLFLSKA---VG-SQGRVISFEVRKDHHDLAKK 148 (336)
T ss_dssp SCCSSCCCCHHHHHHHHHHHTCC-----TTCEEEEECCTTSH----HHHHHHHH---HC-TTCEEEEEESSHHHHHHHHH
T ss_pred hcCCCcccCHHHHHHHHHhcCCC-----CCCEEEEeCCCcCH----HHHHHHHH---hC-CCceEEEEeCCHHHHHHHHH
Confidence 34445567777677788877432 34589999999984 33445544 12 24689999999888888888
Q ss_pred HHHHHH
Q 041748 255 RLVSFS 260 (479)
Q Consensus 255 rL~~fA 260 (479)
++..+-
T Consensus 149 ~~~~~~ 154 (336)
T 2b25_A 149 NYKHWR 154 (336)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 877654
No 188
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=24.41 E-value=84 Score=29.36 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=31.1
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLV 257 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~ 257 (479)
.-+|+|+|.|.|.--.. ||.. . |..+||+|+.+...++.+.++..
T Consensus 81 ~~~vLDiG~G~G~~~i~----la~~--~---~~~~v~~vD~s~~~~~~a~~~~~ 125 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLP----LKIV--R---PELELVLVDATRKKVAFVERAIE 125 (249)
T ss_dssp SCEEEEETCTTTTTHHH----HHHH--C---TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCHHHHH----HHHH--C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 46899999999963222 3333 1 24789999998887777666544
No 189
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=24.35 E-value=80 Score=29.98 Aligned_cols=43 Identities=7% Similarity=-0.008 Sum_probs=32.9
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLV 257 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~ 257 (479)
.-+|+|+|.|.|. |-..|+.+ + -++|+|+.+.+.++.+.+++.
T Consensus 30 ~~~VLEIG~G~G~----lt~~La~~---~----~~V~avEid~~~~~~~~~~~~ 72 (255)
T 3tqs_A 30 TDTLVEIGPGRGA----LTDYLLTE---C----DNLALVEIDRDLVAFLQKKYN 72 (255)
T ss_dssp TCEEEEECCTTTT----THHHHTTT---S----SEEEEEECCHHHHHHHHHHHT
T ss_pred cCEEEEEcccccH----HHHHHHHh---C----CEEEEEECCHHHHHHHHHHHh
Confidence 4589999999994 56677776 2 379999998887777766654
No 190
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=22.94 E-value=1.4e+02 Score=25.69 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=27.1
Q ss_pred eEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHH
Q 041748 205 LHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQE 251 (479)
Q Consensus 205 VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~e 251 (479)
-.|+|+|.|.| .+...|+.+ + ++|||+.+...++.
T Consensus 25 ~~vLD~GcG~G----~~~~~l~~~---~-----~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 25 KIVLDLGTSTG----VITEQLRKR---N-----TVVSTDLNIRALES 59 (170)
T ss_dssp CEEEEETCTTC----HHHHHHTTT---S-----EEEEEESCHHHHHT
T ss_pred CeEEEeccCcc----HHHHHHHhc---C-----cEEEEECCHHHHhc
Confidence 48999999999 355567766 2 99999988776655
No 191
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=22.91 E-value=1.1e+02 Score=26.90 Aligned_cols=48 Identities=15% Similarity=0.160 Sum_probs=33.1
Q ss_pred ceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHH
Q 041748 203 RALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVS 258 (479)
Q Consensus 203 ~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~ 258 (479)
+.-+|+|+|.|.|..- ..|+.. ++ |.-++|+|+.+...++.+.+++..
T Consensus 77 ~~~~vLdiG~G~G~~~----~~l~~~---~~-~~~~v~~vD~~~~~~~~a~~~~~~ 124 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHA----AVTAEI---VG-EDGLVVSIERIPELAEKAERTLRK 124 (215)
T ss_dssp TTCEEEEECCTTSHHH----HHHHHH---HC-TTSEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHH----HHHHHH---hC-CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 3568999999988433 334444 12 235899999988888777776654
No 192
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=21.44 E-value=90 Score=28.10 Aligned_cols=41 Identities=15% Similarity=0.110 Sum_probs=31.2
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHH
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENR 255 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~r 255 (479)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++
T Consensus 49 ~~~vLDiGcG~G~----~~~~l~~~---~----~~v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 49 QTRVLEAGCGHGP----DAARFGPQ---A----ARWAAYDFSPELLKLARAN 89 (226)
T ss_dssp TCEEEEESCTTSH----HHHHHGGG---S----SEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEeCCCCCH----HHHHHHHc---C----CEEEEEECCHHHHHHHHHh
Confidence 4689999999995 55666765 2 3899999988877776655
No 193
>3v4y_B Nuclear inhibitor of protein phosphatase 1; PP1, Ser/Thr phosphatase, NIPP1, IDP, hydrolase; HET: GOL 15P; 2.10A {Homo sapiens}
Probab=21.10 E-value=19 Score=27.62 Aligned_cols=12 Identities=50% Similarity=0.786 Sum_probs=3.0
Q ss_pred HHhhhhccccccC
Q 041748 28 QRKRKRITRVSLN 40 (479)
Q Consensus 28 ~~~~~~~~~~~~~ 40 (479)
|||||++ .+.|+
T Consensus 39 kRKRk~~-~V~F~ 50 (62)
T 3v4y_B 39 KRKRKNS-RVTFS 50 (62)
T ss_dssp ------C-CCEEC
T ss_pred ccccccC-ccccC
Confidence 4443333 35565
No 194
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=21.04 E-value=1.6e+02 Score=29.82 Aligned_cols=100 Identities=14% Similarity=0.109 Sum_probs=51.4
Q ss_pred EEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCeeEEEEEeeccceeccccCC
Q 041748 206 HVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIRKK 285 (479)
Q Consensus 206 HIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnvpFeF~~v~~~~~l~~L~~~ 285 (479)
+|+|+|.|.| ++--+|.+. | . -+++||+.+. .+ +..+++ ++.-| +.=....+..+. ..+.+.
T Consensus 86 ~VLDvG~GtG-----iLs~~Aa~a--G-A--~~V~ave~s~-~~-~~a~~~---~~~n~-~~~~i~~i~~~~--~~~~lp 147 (376)
T 4hc4_A 86 TVLDVGAGTG-----ILSIFCAQA--G-A--RRVYAVEASA-IW-QQAREV---VRFNG-LEDRVHVLPGPV--ETVELP 147 (376)
T ss_dssp EEEEETCTTS-----HHHHHHHHT--T-C--SEEEEEECST-TH-HHHHHH---HHHTT-CTTTEEEEESCT--TTCCCS
T ss_pred EEEEeCCCcc-----HHHHHHHHh--C-C--CEEEEEeChH-HH-HHHHHH---HHHcC-CCceEEEEeeee--eeecCC
Confidence 5899999888 334456562 3 2 3789999753 22 333333 33333 322222233332 222222
Q ss_pred CC-cEEEEeeccccccccchhhhHHHHHHh-HccCCcEEEEE
Q 041748 286 KH-ETVAANLVFHLNTLKIYLKISDTLNLV-RSIKPTIVTLV 325 (479)
Q Consensus 286 ~~-EaLaVN~~~~Lh~L~~~~~~~~~L~~I-r~L~P~Vvtlv 325 (479)
.. ++|+-+++ -+.|..+..++.+|... |-|+|.-+++=
T Consensus 148 e~~DvivsE~~--~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 148 EQVDAIVSEWM--GYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp SCEEEEECCCC--BTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccEEEeecc--cccccccchhhhHHHHHHhhCCCCceECC
Confidence 11 23333333 23455566677787766 67888877653
No 195
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=20.50 E-value=3.9e+02 Score=23.67 Aligned_cols=99 Identities=9% Similarity=0.195 Sum_probs=56.0
Q ss_pred eeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHHHhhcCCe--eEEEEEeeccc-ee-
Q 041748 204 ALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNL--VFEFQGLIRGS-RL- 279 (479)
Q Consensus 204 ~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~fA~~lgnv--pFeF~~v~~~~-~l- 279 (479)
.-+|+|+|.|.|. +...|+.+- | ..+||+|+.+...++.+.+++.. .| + ..+|. ..+. +.
T Consensus 55 ~~~vLdiG~G~G~----~~~~la~~~----~-~~~v~~vD~~~~~~~~a~~~~~~----~~-~~~~v~~~--~~d~~~~~ 118 (233)
T 2gpy_A 55 PARILEIGTAIGY----SAIRMAQAL----P-EATIVSIERDERRYEEAHKHVKA----LG-LESRIELL--FGDALQLG 118 (233)
T ss_dssp CSEEEEECCTTSH----HHHHHHHHC----T-TCEEEEECCCHHHHHHHHHHHHH----TT-CTTTEEEE--CSCGGGSH
T ss_pred CCEEEEecCCCcH----HHHHHHHHC----C-CCEEEEEECCHHHHHHHHHHHHH----cC-CCCcEEEE--ECCHHHHH
Confidence 4589999999884 233455541 1 36899999988888777766543 33 3 23442 2222 11
Q ss_pred cccc-CCCCcEEEEeeccccccccchhhhHHHHH-HhHccCCcEEEEEe
Q 041748 280 VNIR-KKKHETVAANLVFHLNTLKIYLKISDTLN-LVRSIKPTIVTLVE 326 (479)
Q Consensus 280 ~~L~-~~~~EaLaVN~~~~Lh~L~~~~~~~~~L~-~Ir~L~P~VvtlvE 326 (479)
..+. -.+=+.|+++.... ....+|. ..+.|+|.-+++++
T Consensus 119 ~~~~~~~~fD~I~~~~~~~--------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 119 EKLELYPLFDVLFIDAAKG--------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp HHHTTSCCEEEEEEEGGGS--------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred HhcccCCCccEEEECCCHH--------HHHHHHHHHHHHcCCCeEEEEE
Confidence 1110 11224566555421 2334554 44679999888775
No 196
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=20.04 E-value=1.3e+02 Score=27.85 Aligned_cols=59 Identities=10% Similarity=0.124 Sum_probs=39.5
Q ss_pred HHHHHHHHhchhccCceeEEEeccccccccchHHHHHhhcccCCCCCceEEEeeecCChHHHHHHHHHHHHH
Q 041748 188 QAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSF 259 (479)
Q Consensus 188 qAILEA~~ge~~~~~~~VHIIDf~I~~G~QWpsLiqaLA~R~~~ggpP~LRITgI~~~~~~l~etg~rL~~f 259 (479)
..|++.+.-. ..-.|+|+|.|.|. +...|+.+- + |..++|+|+.+.+.++.+.+++..+
T Consensus 89 ~~i~~~~~~~-----~~~~vLdiG~G~G~----~~~~l~~~~---~-~~~~v~~vD~~~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 89 AQIVHEGDIF-----PGARVLEAGAGSGA----LTLSLLRAV---G-PAGQVISYEQRADHAEHARRNVSGC 147 (280)
T ss_dssp HHHHHHTTCC-----TTCEEEEECCTTSH----HHHHHHHHH---C-TTSEEEEECSCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC-----CCCEEEEEcccccH----HHHHHHHHh---C-CCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 4556655421 34579999999884 444555541 1 2358999999988888888777655
Done!